RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000178078

Ensembl transcript IDs: ENST00000594605.6, ENST00000596242.5, ENST00000597593.5, ENST00000598443.5, ENST00000599736.5, ENST00000600324.5, ENST00000601179.1, ENST00000601482.1, ENST00000601956.5, ENST00000602007.5

Found 294 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTAATGCCGGACCACGTGCGTCCCGTTGTGCATCTGCCGCGTGGTaGCCGACACGCCGTCGGCGCCGTCCCCGCTGGGCCGCAGCAGCA +
Preference number: 1 (lower is better)
Translates to: CNAGPRASRCASAAW*PTRRRRRPRWAAAA
Trigger: TGCTGCTGCGGCCCAGCGGGGACGGCGCCGACGGCGTGTCGGTCACCACGCGGCAGATGCACAACGGGACGCACGTGGTCCGGCATTACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR CCA 90 bp GGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTaGTCCCTGGTGTGTCCGAATCAGTGCTCCAGTGCCCGCCTCTTC +
Preference number: 1 (lower is better)
Translates to: GKRIWPLGHALGLAR*SLVCPNQCSSARLF
Trigger: GAAGAGGCGGGCACTGGAGCACTGATTCGGACACACCAGGGACCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR GCA 90 bp CGGCGCGCCTCCTCTTTGGCCAAGACTTCAGACATCATGTATAGGTaGCCAGGAAGCAGGGTCAAGTCGGTCGGGACACGGAGCTCCACC +
Preference number: 1 (lower is better)
Translates to: RRASSLAKTSDIMYR*PGSRVKSVGTRSST
Trigger: GGTGGAGCTCCGTGTCCCGACCGACTTGACCCTGCTTCCTGGGCACCTATACATGATGTCTGAAGTCTTGGCCAAAGAGGAGGCGCGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR CCA 90 bp CCAGGGAGGTGCAAGAGAACGGCTGTTCCACATCGATCACGTACTTaGGGCCCTCCCGCTTCACCTTGTAATGCCGGACCACGTGCGTCC +
Preference number: 1 (lower is better)
Translates to: PGRCKRTAVPHRSRT*GPPASPCNAGPRAS
Trigger: GGACGCACGTGGTCCGGCATTACAAGGTGAAGCGGGAGGGCCCCAAGTACGTGATCGATGTGGAACAGCCGTTCTCTTGCACCTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR TCA 90 bp TGCCGTCATGTCTGCCAGCCCGGCTGTGGGGAAGAGAGGCTGGGCTaGACTGACTGGCAGCTTCCTGCCCAAGCCACCATTAAAGACTTT +
Preference number: 1 (lower is better)
Translates to: CRHVCQPGCGEERLG*TDWQLPAQATIKDF
Trigger: AAAGTCTTTAATGGTGGCTTGGGCAGGAAGCTGCCAGTCAGTTCAGCCCAGCCTCTCTTCCCCACAGCCGGGCTGGCAGACATGACGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR CCA 90 bp TCAGGAAGCACGAGGGTGTCTCCAGTGCACGGCGCGCCTCCTCTTTaGCCAAGACTTCAGACATCATGTATAGGTGCCCAGGAAGCAGGG +
Preference number: 1 (lower is better)
Translates to: SGSTRVSPVHGAPPL*PRLQTSCIGAQEAG
Trigger: CCCTGCTTCCTGGGCACCTATACATGATGTCTGAAGTCTTGGCCAAAGAGGAGGCGCGCCGTGCACTGGAGACACCCTCGTGCTTCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR GCA 90 bp GGTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATaGCCTGGGACTAGCCCGCTGGTCCCTGGTGTGTCCGAATCAGTG +
Preference number: 1 (lower is better)
Translates to: GQSFNPGKKNLAAGP*PGTSPLVPGVSESV
Trigger: CACTGATTCGGACACACCAGGGACCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR CCA 90 bp TGGCTTGGGTCCAACGGGTGGCTTTGGAAGCTTGGCAGGAGGCTTTaGCAACTTCTTTGGCTTCAGGATGACTGGCCAACTAGAGGAAGC +
Preference number: 1 (lower is better)
Translates to: WLGSNGWLWKLGRRL*QLLWLQDDWPTRGS
Trigger: GCTTCCTCTAGTTGGCCAGTCATCCTGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR TCA 90 bp ACAGGAATGGCACCAGCGCCTTTTTGGTATGCGACACGAAATAGTTaGCCACGGCGTCCAGGGAGGTGCAAGAGAACGGCTGTTCCACAT +
Preference number: 1 (lower is better)
Translates to: TGMAPAPFWYATRNS*PRRPGRCKRTAVPH
Trigger: ATGTGGAACAGCCGTTCTCTTGCACCTCCCTGGACGCCGTGGTCAACTATTTCGTGTCGCATACCAAAAAGGCGCTGGTGCCATTCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR CCA 90 bp AAGCCACATCTTGGTTCTCATAGTCAACAGCTGGGCCATCTCCAATaGGGGTCACGTAGTTCTCTTCCTGGTTCGGTAGTGGGGGCAGTG +
Preference number: 1 (lower is better)
Translates to: KPHLGSHSQQLGHLQ*GSRSSLPGSVVGAV
Trigger: CACTGCCCCCACTACCGAACCAGGAAGAGAACTACGTGACCCCCATTGGAGATGGCCCAGCTGTTGACTATGAGAACCAAGATGTGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR CCA 90 bp TGGCCAACTAGAGGAAGCCACATCTTGGTTCTCATAGTCAACAGCTaGGCCATCTCCAATGGGGGTCACGTAGTTCTCTTCCTGGTTCGG +
Preference number: 1 (lower is better)
Translates to: WPTRGSHILVLIVNS*AISNGGHVVLFLVR
Trigger: CCGAACCAGGAAGAGAACTACGTGACCCCCATTGGAGATGGCCCAGCTGTTGACTATGAGAACCAAGATGTGGCTTCCTCTAGTTGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR CCA 90 bp AACGGGTGGCTTTGGAAGCTTGGCAGGAGGCTTTGGCAACTTCTTTaGCTTCAGGATGACTGGCCAACTAGAGGAAGCCACATCTTGGTT +
Preference number: 1 (lower is better)
Translates to: NGWLWKLGRRLWQLL*LQDDWPTRGSHILV
Trigger: AACCAAGATGTGGCTTCCTCTAGTTGGCCAGTCATCCTGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR-3UTR GCA 90 bp CCCGTTGTGCATCTGCCGCGTGGTGACCGACACGCCGTCGGCGCCGTCCCCGCTCTGGCCGCTGGGCCATaGCCTGGGACTAGCCCGCTG +
Preference number: 2 (lower is better)
Translates to: PVVHLPRGDRHAVGAVPALAAGP*PGTSPL
Trigger: CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAG...AGCGGGGACGGCGCCGACGGCGTGTCGGTCACCACGCGGCAGATGCACAACGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR CAA 90 bp CCGCAGCAGCAGGTTCCCGCACTCGGGGTAGCGCTCCAGGAGCAGTaGTGCCTCCAGCCGGCTCACCTTCAGGAAGCACGAGGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: PQQQVPALGVALQEQ*CLQPAHLQEARGCL
Trigger: GAGACACCCTCGTGCTTCCTGAAGGTGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGCTACCCCGAGTGCGGGAACCTGCTGCTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR-3UTR TCA 90 bp GGCGCCGTCCCCGCTGGGCCGCAGCAGCAGGTTCCCGCACTCGGGGTAGCGCTCCCACCACCGTTAAGATaGAGCCTTTCCACATTTCCC +
Preference number: 2 (lower is better)
Translates to: GAVPAGPQQQVPALGVALPPPLR*SLSTFP
Trigger: GGGAAATGTGGAAAGGCTTCATCTTAACGGTGGTGG...GAGCGCTACCCCGAGTGCGGGAACCTGCTGCTGCGGCCCAGCGGGGACGGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR-3UTR TCA 90 bp GAGAACGGCTGTTCCACATCGATCACGTACTTGGGGCCCTCCCGCTTCACCTTGGCATCTGCCGCGTGGTaGCCGACACGCCGTCGGCGC +
Preference number: 2 (lower is better)
Translates to: ENGCSTSITYLGPSRFTLASAAW*PTRRRR
Trigger: GCGCCGACGGCGTGTCGGTCACCACGCGGCAGATGC...CAAGGTGAAGCGGGAGGGCCCCAAGTACGTGATCGATGTGGAACAGCCGTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR-3UTR CCA 90 bp GCCCGCTGGTCCCTGGTGTGTCCGAATCAGTGCTCCAGTGCCCGCCTCTTCTCCCTTGGGTCCAACGGGTaGCTTTGGAAGCTTGGCAGG +
Preference number: 2 (lower is better)
Translates to: ARWSLVCPNQCSSARLFSLGSNG*LWKLGR
Trigger: CCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAG...GGAGAAGAGGCGGGCACTGGAGCACTGATTCGGACACACCAGGGACCAGCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR-3UTR GCA 90 bp CTGGGCAACATGGTGAAACCCCTTCTCTGGCTTGGGTCCAACGGGTGGCTTTGGCGAGGGTGTCTCCAGTaGACGGCGCGCCTCCTCTTT +
Preference number: 2 (lower is better)
Translates to: LGNMVKPLLWLGSNGWLWRGCLQ*TARLLF
Trigger: AAAGAGGAGGCGCGCCGTGCACTGGAGACACCCTCG...CCAAAGCCACCCGTTGGACCCAAGCCAGAGAAGGGGTTTCACCATGTTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR-3UTR GCA 90 bp CCAGTGCCCGCCTCTTCTCCAGCTTCTTCTGTAGCTCTGCCGTCATGTCTGCCACGGCGTCCAGGGAGGTaGAAGAGAACGGCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: PVPASSPASSVALPSCLPRRPGR*KRTAVP
Trigger: TGGAACAGCCGTTCTCTTGCACCTCCCTGGACGCCG...TGGCAGACATGACGGCAGAGCTACAGAAGAAGCTGGAGAAGAGGCGGGCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR CAA 90 bp TTCAGGAAGCACGAGGGTGTCTCCAGTGCACGGCGCGCCTCCTCTTaGGCCAAGACTTCAGACATCATGTATAGGTGCCCAGGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: FRKHEGVSSARRASS*AKTSDIMYRCPGSR
Trigger: CCTGCTTCCTGGGCACCTATACATGATGTCTGAAGTCTTGGCCAAAGAGGAGGCGCGCCGTGCACTGGAGACACCCTCGTGCTTCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR-3UTR GCA 90 bp CTCATAGTCAACAGCTGGGCCATCTCCAATGGGGGTCACGTAGTTCTCTTCCTGGTCCCGTTGTGCATCTaGCGCGTGGTGACCGACACG +
Preference number: 2 (lower is better)
Translates to: LIVNSWAISNGGHVVLFLVPLCI*RVVTDT
Trigger: CGTGTCGGTCACCACGCGGCAGATGCACAACGGGAC...CAGGAAGAGAACTACGTGACCCCCATTGGAGATGGCCCAGCTGTTGACTATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR-3UTR TCA 90 bp TCTCGCCATTCTCCTTATCGGCTTCCACGTAGCCTAGCACCTTCTCGTAGTCCTGCGACACGAAATAGTTaGCCACGGCGTCCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: SRHSPYRLPRSLAPSRSPATRNS*PRRPGR
Trigger: CCTCCCTGGACGCCGTGGTCAACTATTTCGTGTCGC...AGGACTACGAGAAGGTGCTAGGCTACGTGGAAGCCGATAAGGAGAATGGCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR-3UTR CCA 90 bp CCAGTGCCCGCCTCTTCTCCAGCTTCTTCTGTAGCTCTGCCGTCATGTCTGCCACTGGGCCATCTCCAATaGGGGTCACGTAGTTCTCTT +
Preference number: 2 (lower is better)
Translates to: PVPASSPASSVALPSCLPLGHLQ*GSRSSL
Trigger: AAGAGAACTACGTGACCCCCATTGGAGATGGCCCAG...TGGCAGACATGACGGCAGAGCTACAGAAGAAGCTGGAGAAGAGGCGGGCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR CAA 90 bp CAACATGGTGAAACCCCTTCTCTGGCTTGGGTCCAACGGGTGGCTTaGGAAGCTTGGCAGGAGGCTTTGGCAACTTCTTTGGCTTCAGGA +
Preference number: 2 (lower is better)
Translates to: QHGETPSLAWVQRVA*EAWQEALATSLASG
Trigger: TCCTGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAGCCAGAGAAGGGGTTTCACCATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR-3UTR CCA 90 bp CCAGTGCCCGCCTCTTCTCCAGCTTCTTCTGTAGCTCTGCCGTCATGTCTGCCAGCACCAGCGCCTTTTTaGTATGCGACACGAAATAGT +
Preference number: 2 (lower is better)
Translates to: PVPASSPASSVALPSCLPAPAPF*YATRNS
Trigger: ACTATTTCGTGTCGCATACCAAAAAGGCGCTGGTGC...TGGCAGACATGACGGCAGAGCTACAGAAGAAGCTGGAGAAGAGGCGGGCACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR TCA 72 bp GGACCACGTGCGTCCCGTTGTGCATCTGCCGCGTGGTaGCCGACACGCCGTCGGCGCCGTCCCCGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: GPRASRCASAAW*PTRRRRRPRWA
Trigger: GGCCCAGCGGGGACGGCGCCGACGGCGTGTCGGTCACCACGCGGCAGATGCACAACGGGACGCACGTGGTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR-3UTR CAA 90 bp GGTCCCTGGTGTGTCCGAATCAGTGCTCCAGTGCCCGCCTCTTCTCCAGCTTCTGGCAGTGGGGGCAGCTaGTCCTGGCTAGACGCAGGT +
Preference number: 3 (lower is better)
Translates to: GPWCVRISAPVPASSPASGSGGS*SWLDAG
Trigger: ACCTGCGTCTAGCCAGGACAAGCTGCCCCCACTGCC...AGAAGCTGGAGAAGAGGCGGGCACTGGAGCACTGATTCGGACACACCAGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR GCA 72 bp GGACTAGCCCGCTGGTCCCTGGTGTGTCCGAATCAGTaGTCCAGTGCCCGCCTCTTCTCCAGCTTCTTCTGT +
Preference number: 3 (lower is better)
Translates to: GLARWSLVCPNQ*SSARLFSSFFC
Trigger: ACAGAAGAAGCTGGAGAAGAGGCGGGCACTGGAGCACTGATTCGGACACACCAGGGACCAGCGGGCTAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR TCA 72 bp GCACCAGCGCCTTTTTGGTATGCGACACGAAATAGTTaGCCACGGCGTCCAGGGAGGTGCAAGAGAACGGCT +
Preference number: 3 (lower is better)
Translates to: APAPFWYATRNS*PRRPGRCKRTA
Trigger: AGCCGTTCTCTTGCACCTCCCTGGACGCCGTGGTCAACTATTTCGTGTCGCATACCAAAAAGGCGCTGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR CCA 72 bp TGCAAGAGAACGGCTGTTCCACATCGATCACGTACTTaGGGCCCTCCCGCTTCACCTTGTAATGCCGGACCA +
Preference number: 3 (lower is better)
Translates to: CKRTAVPHRSRT*GPPASPCNAGP
Trigger: TGGTCCGGCATTACAAGGTGAAGCGGGAGGGCCCCAAGTACGTGATCGATGTGGAACAGCCGTTCTCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR GCA 72 bp TCCTCTTTGGCCAAGACTTCAGACATCATGTATAGGTaGCCAGGAAGCAGGGTCAAGTCGGTCGGGACACGG +
Preference number: 3 (lower is better)
Translates to: SSLAKTSDIMYR*PGSRVKSVGTR
Trigger: CCGTGTCCCGACCGACTTGACCCTGCTTCCTGGGCACCTATACATGATGTCTGAAGTCTTGGCCAAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR CCA 72 bp TCCAACGGGTGGCTTTGGAAGCTTGGCAGGAGGCTTTaGCAACTTCTTTGGCTTCAGGATGACTGGCCAACT +
Preference number: 3 (lower is better)
Translates to: SNGWLWKLGRRL*QLLWLQDDWPT
Trigger: AGTTGGCCAGTCATCCTGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR CCA 72 bp CTTGGTTCTCATAGTCAACAGCTGGGCCATCTCCAATaGGGGTCACGTAGTTCTCTTCCTGGTTCGGTAGTG +
Preference number: 3 (lower is better)
Translates to: LGSHSQQLGHLQ*GSRSSLPGSVV
Trigger: CACTACCGAACCAGGAAGAGAACTACGTGACCCCCATTGGAGATGGCCCAGCTGTTGACTATGAGAACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR CCA 72 bp CTTTGGAAGCTTGGCAGGAGGCTTTGGCAACTTCTTTaGCTTCAGGATGACTGGCCAACTAGAGGAAGCCAC +
Preference number: 3 (lower is better)
Translates to: LWKLGRRLWQLL*LQDDWPTRGSH
Trigger: GTGGCTTCCTCTAGTTGGCCAGTCATCCTGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR CCA 72 bp AGAGGAAGCCACATCTTGGTTCTCATAGTCAACAGCTaGGCCATCTCCAATGGGGGTCACGTAGTTCTCTTC +
Preference number: 3 (lower is better)
Translates to: RGSHILVLIVNS*AISNGGHVVLF
Trigger: GAAGAGAACTACGTGACCCCCATTGGAGATGGCCCAGCTGTTGACTATGAGAACCAAGATGTGGCTTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
3UTR CCA 72 bp AGGAGGCTTTGGCAACTTCTTTGGCTTCAGGATGACTaGCCAACTAGAGGAAGCCACATCTTGGTTCTCATA +
Preference number: 3 (lower is better)
Translates to: RRLWQLLWLQDD*PTRGSHILVLI
Trigger: TATGAGAACCAAGATGTGGCTTCCTCTAGTTGGCCAGTCATCCTGAAGCCAAAGAAGTTGCCAAAGCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR TCA 90 bp GGCGCCGTCCCCGCTGGGCCGCAGCAGCAGGTTCCCGCACTCGGGGTAGCGCTCGCGACACGAAATAGTTaGCCACGGCGTCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GAVPAGPQQQVPALGVALATRNS*PRRPGR
Trigger: CCTCCCTGGACGCCGTGGTCAACTATTTCGTGTCGC...GAGCGCTACCCCGAGTGCGGGAACCTGCTGCTGCGGCCCAGCGGGGACGGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR TCA 90 bp CGGGGTAGCGCTCCAGGAGCAGTTGTGCCTCCAGCCGGCTCACCTTCAGGAAGCGCATCTGCCGCGTGGTaGCCGACACGCCGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: RGSAPGAVVPPAGSPSGSASAAW*PTRRRR
Trigger: GCGCCGACGGCGTGTCGGTCACCACGCGGCAGATGC...GCTTCCTGAAGGTGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGCTACCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR TCA 90 bp GGTTCCCGCACTCGGGGTAGCGCTCCAGGAGCAGTTGTGCCTCCAGCCGGCTCAAGGCCGGGGCTGCACTaGTCAGGCGCGCAACGAGCC +
Preference number: 4 (lower is better)
Translates to: GSRTRGSAPGAVVPPAGSRPGLH*SGAQRA
Trigger: GGCTCGTTGCGCGCCTGATCAGTGCAGCCCCGGCCT...TGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGCTACCCCGAGTGCGGGAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp CCCGTTGTGCATCTGCCGCGTGGTGACCGACACGCCGTCGGCGCCGTCCCCGCTACGTGCGTCCCGTTGTaGATCTGCCGCGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: PVVHLPRGDRHAVGAVPATCVPL*ICRVVT
Trigger: GGTCACCACGCGGCAGATGCACAACGGGACGCACGT...AGCGGGGACGGCGCCGACGGCGTGTCGGTCACCACGCGGCAGATGCACAACGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp GTTCCCGCACTCGGGGTAGCGCTCCAGGAGCAGTTGTGCCTCCAGCCGGCTCACCAACGAGCCCGGCCCTaGCTCCTGCTCCGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: VPALGVALQEQLCLQPAHQRARP*LLLRPR
Trigger: CCTTGGGCGGAGCAGGAGGCAGGGCCGGGCTCGTTG...GTGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGCTACCCCGAGTGCGGGAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR TCA 90 bp CAGGGTGCAGGACCTGGGCCCGGAGCGGAGGGCGCCACCCACACATTCTCGCCAGAGGCTGGGCTGAACTaGCTGGCAGCTTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: QGAGPGPGAEGATHTFSPEAGLN*LAASCP
Trigger: TGGGCAGGAAGCTGCCAGTCAGTTCAGCCCAGCCTC...TGGCGAGAATGTGTGGGTGGCGCCCTCCGCTCCGGGCCCAGGTCCTGCACCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp CGGGGTAGCGCTCCAGGAGCAGTTGTGCCTCCAGCCGGCTCACCTTCAGGAAGCGGCCTCTCCTTCCAGTaGGTGCCCCAGCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RGSAPGAVVPPAGSPSGSGLSFQ*VPQLGR
Trigger: CCGGCCCAGCTGGGGCACCCACTGGAAGGAGAGGCC...GCTTCCTGAAGGTGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGCTACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR TCA 90 bp TGGGCCGCAGCAGCAGGTTCCCGCACTCGGGGTAGCGCTCCAGGAGCAGTTGTGTCAGGGCAGAGGCCATaGCGGAGCCAGGGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: WAAAAGSRTRGSAPGAVVSGQRP*RSQGLP
Trigger: CGGAAGACCCTGGCTCCGTCATGGCCTCTGCCCTGA...CACAACTGCTCCTGGAGCGCTACCCCGAGTGCGGGAACCTGCTGCTGCGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp CCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGTCCTGGCCGCTGGGCCATaGCCTGGGACTAGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: PGKKNLAAGPCPGTSPLVLAAGP*PGTSPL
Trigger: CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAG...GACCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR GCA 90 bp ATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGGCCACCTGTGCAGGGTaGAGGACCTGGGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: ILGKRIWPLGHALGLARWATCAG*RTWARS
Trigger: GCTCCGGGCCCAGGTCCTGCACCCTGCACAGGTGGC...CCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCGCATCTGCCGCGTGGTaGCCGACACGCCGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: LILGKRIWPLGHALGLARASAAW*PTRRRR
Trigger: GCGCCGACGGCGTGTCGGTCACCACGCGGCAGATGC...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp ATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGCTGGCTAGACGCAGGTaGCAGCGGCTTGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: ILGKRIWPLGHALGLARWLARRR*QRLGAT
Trigger: GGTGGCCCCAAGCCGCTGTCACCTGCGTCTAGCCAG...CCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR GCA 90 bp ATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGGCTTGGGGCCACCTGTaGAGGGTGCAGGACCTGGGC +
Preference number: 4 (lower is better)
Translates to: ILGKRIWPLGHALGLARWAWGHL*RVQDLG
Trigger: GCCCAGGTCCTGCACCCTGCACAGGTGGCCCCAAGC...CCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR GCA 90 bp AATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGCTGGCCGCTGGGCCATaGCCTGGGACTAGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: NPGKKNLAAGPCPGTSPLLAAGP*PGTSPL
Trigger: CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAG...CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp CGGGGTAGCGCTCCAGGAGCAGTTGTGCCTCCAGCCGGCTCACCTTCAGGAAGCCCAGGGTCTTCCGCCTaGCCTCTCCTTCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: RGSAPGAVVPPAGSPSGSPGSSA*PLLPVG
Trigger: ACCCACTGGAAGGAGAGGCCAGGCGGAAGACCCTGG...GCTTCCTGAAGGTGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGCTACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp CCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGTCCAGGTGACAGCGGCTTaGGGCCACCTGTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PGKKNLAAGPCPGTSPLVQVTAA*GHLCRV
Trigger: CACCCTGCACAGGTGGCCCCAAGCCGCTGTCACCTG...GACCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp GGTTCCCGCACTCGGGGTAGCGCTCCAGGAGCAGTTGTGCCTCCAGCCGGCTCATTCCCGACTGCGGTCTaGGCAAAGCCACCCGCACTT +
Preference number: 4 (lower is better)
Translates to: GSRTRGSAPGAVVPPAGSFPTAV*AKPPAL
Trigger: AAGTGCGGGTGGCTTTGCCCAGACCGCAGTCGGGAA...TGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGCTACCCCGAGTGCGGGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp CCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGTCAAAGACTTTGGGCTCTaGGCCCGGAGCGGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: PGKKNLAAGPCPGTSPLVKDFGL*ARSGGR
Trigger: GCGCCCTCCGCTCCGGGCCCAGAGCCCAAAGTCTTT...GACCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598443.5
3UTR CAA 72 bp CAGGTTCCCGCACTCGGGGTAGCGCTCCAGGAGCAGTaGTGCCTCCAGCCGGCTCACCTTCAGGAAGCACGA +
Preference number: 4 (lower is better)
Translates to: QVPALGVALQEQ*CLQPAHLQEAR
Trigger: TCGTGCTTCCTGAAGGTGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGCTACCCCGAGTGCGGGAACCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp CCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGTCGTCCCGTTGTGCATCTaGCGCGTGGTGACCGACACG +
Preference number: 4 (lower is better)
Translates to: PGKKNLAAGPCPGTSPLVVPLCI*RVVTDT
Trigger: CGTGTCGGTCACCACGCGGCAGATGCACAACGGGAC...GACCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp CCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGTCCCAGGGTCTTCCGCCTaGCCTCTCCTTCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: PGKKNLAAGPCPGTSPLVPGSSA*PLLPVG
Trigger: ACCCACTGGAAGGAGAGGCCAGGCGGAAGACCCTGG...GACCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp ATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGCTTGGGGACACGGGGTaGCCTCAGGGCAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: ILGKRIWPLGHALGLARWLGDTG*PQGRGH
Trigger: ATGGCCTCTGCCCTGAGGCCACCCCGTGTCCCCAAG...CCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp CCCGTTGTGCATCTGCCGCGTGGTGACCGACACGCCGTCGGCGCCGTCCCCGCTCTTGGCAGGAGGCTTTaGCAACTTCTTTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: PVVHLPRGDRHAVGAVPALGRRL*QLLWLQ
Trigger: CTGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAG...AGCGGGGACGGCGCCGACGGCGTGTCGGTCACCACGCGGCAGATGCACAACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR TCA 90 bp GGAAGCAGGGTCAAGTCGGTCGGGACACGGAGCTCCACCACCGTTAAGATGAAGCTGGCTAGACGCAGGTaGCAGCGGCTTGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GSRVKSVGTRSSTTVKMKLARRR*QRLGAT
Trigger: GGTGGCCCCAAGCCGCTGTCACCTGCGTCTAGCCAG...CTTCATCTTAACGGTGGTGGAGCTCCGTGTCCCGACCGACTTGACCCTGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp ATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGCGAGGGTGTCTCCAGTaGACGGCGCGCCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: ILGKRIWPLGHALGLARWRGCLQ*TARLLF
Trigger: AAAGAGGAGGCGCGCCGTGCACTGGAGACACCCTCG...CCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp TTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGGCCACCTGTGCAGGGTaGAGGACCTGGGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: FNPGKKNLAAGPCPGTSPATCAG*RTWARS
Trigger: GCTCCGGGCCCAGGTCCTGCACCCTGCACAGGTGGC...CGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp ATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGCTCTGCCGTCATGTCTaGCAGCCCTGGCTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: ILGKRIWPLGHALGLARWLCRHV*QPWLGS
Trigger: GGACCCAAGCCAGGGCTGGCAGACATGACGGCAGAG...CCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601956.5
CDS-3UTR CCA 90 bp TTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGGGCCTCTCCTTCCAGTaGGTGCCCCAGCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: FNPGKKNLAAGPCPGTSPGLSFQ*VPQLGR
Trigger: CCGGCCCAGCTGGGGCACCCACTGGAAGGAGAGGCC...CGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCCTGCCAGCCCGGCTGTaGGGAAGAGAGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LILGKRIWPLGHALGLARLPARL*GREAGL
Trigger: CAGCCCAGCCTCTCTTCCCCACAGCCGGGCTGGCAG...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp CTGGGCAACATGGTGAAACCCCTTCTCTGGCTTGGGTCCAACGGGTGGCTTTGGCATTCCCGAGCACCCTaGAGAGCCTCCCCCGCACCC +
Preference number: 4 (lower is better)
Translates to: LGNMVKPLLWLGSNGWLWHSRAP*RASPAP
Trigger: GGGTGCGGGGGAGGCTCTCCAGGGTGCTCGGGAATG...CCAAAGCCACCCGTTGGACCCAAGCCAGAGAAGGGGTTTCACCATGTTGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR TCA 90 bp AATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGAGGCTGGGCTGAACTaGCTGGCAGCTTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NPGKKNLAAGPCPGTSPLEAGLN*LAASCP
Trigger: TGGGCAGGAAGCTGCCAGTCAGTTCAGCCCAGCCTC...CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp ATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGCTCCAGGAGCAGTTGTaGCTCCAGCCGGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: ILGKRIWPLGHALGLARWLQEQL*LQPAHL
Trigger: AAGGTGAGCCGGCTGGAGGCACAACTGCTCCTGGAG...CCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp AATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGACGTGCGTCCCGTTGTaGATCTGCCGCGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: NPGKKNLAAGPCPGTSPLTCVPL*ICRVVT
Trigger: GGTCACCACGCGGCAGATGCACAACGGGACGCACGT...CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp TTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGGCTTGGGGCCACCTGTaGAGGGTGCAGGACCTGGGC +
Preference number: 4 (lower is better)
Translates to: FNPGKKNLAAGPCPGTSPAWGHL*RVQDLG
Trigger: GCCCAGGTCCTGCACCCTGCACAGGTGGCCCCAAGC...CGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR GCA 90 bp AATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGCTCTGCCGTCATGTCTaGCAGCCCGGCTGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: NPGKKNLAAGPCPGTSPLLCRHV*QPGCGE
Trigger: TTCCCCACAGCCGGGCTGGCAGACATGACGGCAGAG...CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCTGGCCGCTGGGCCATaGCCTGGGACTAGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: VLILGKRIWPLGHALGLALAAGP*PGTSPL
Trigger: CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAG...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp CGAGGGTGTCTCCAGTGCACGGCGCGCCTCCTCTTTGGCCAAGACTTCAGACATGGGGGCAGCTTGTCCTaGCTAGACGCAGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: RGCLQCTARLLFGQDFRHGGSLS*LDAGDS
Trigger: GCTGTCACCTGCGTCTAGCCAGGACAAGCTGCCCCC...ATGTCTGAAGTCTTGGCCAAAGAGGAGGCGCGCCGTGCACTGGAGACACCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp TTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGCCAGCCCGGCTGTaGGGAAGAGAGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FNPGKKNLAAGPCPGTSPLPARL*GREAGL
Trigger: CAGCCCAGCCTCTCTTCCCCACAGCCGGGCTGGCAG...CGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp ATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGCTGGGACTAGCCCGCTaGTCCCTGGTGTGTCCGAAT +
Preference number: 4 (lower is better)
Translates to: ILGKRIWPLGHALGLARWLGLAR*SLVCPN
Trigger: ATTCGGACACACCAGGGACCAGCGGGCTAGTCCCAG...CCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp AATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGCTGCCAGCCCTGGCTTaGGTCCAACGGGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: NPGKKNLAAGPCPGTSPLLPALA*VQRVAL
Trigger: CAAAGCCACCCGTTGGACCCAAGCCAGGGCTGGCAG...CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601956.5
CDS-3UTR TCA 90 bp AGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCATCTGCCGCGTGGTaGCCGACACGCCGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: RVLILGKRIWPLGHALGLASAAW*PTRRRR
Trigger: GCGCCGACGGCGTGTCGGTCACCACGCGGCAGATGC...TAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp ACTTGGGGCCCTCCCGCTTCACCTTGTAATGCCGGACCACGTGCGTCCCGTTGTGCCTGGGCAACATGGTaGAACCCCTTCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TWGPPASPCNAGPRASRCAWATW*NPFSGL
Trigger: CAAGCCAGAGAAGGGGTTTCACCATGTTGCCCAGGC...ACAACGGGACGCACGTGGTCCGGCATTACAAGGTGAAGCGGGAGGGCCCCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp CCAGTGCCCGCCTCTTCTCCAGCTTCTTCTGTAGCTCTGCCGTCATGTCTGCCACGAGGGTGTCTCCAGTaGACGGCGCGCCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PVPASSPASSVALPSCLPRGCLQ*TARLLF
Trigger: AAAGAGGAGGCGCGCCGTGCACTGGAGACACCCTCG...TGGCAGACATGACGGCAGAGCTACAGAAGAAGCTGGAGAAGAGGCGGGCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCGTCCCGTTGTGCATCTaGCGCGTGGTGACCGACACG +
Preference number: 4 (lower is better)
Translates to: LILGKRIWPLGHALGLARVPLCI*RVVTDT
Trigger: CGTGTCGGTCACCACGCGGCAGATGCACAACGGGAC...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCACGTGCGTCCCGTTGTaGATCTGCCGCGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: LILGKRIWPLGHALGLARTCVPL*ICRVVT
Trigger: GGTCACCACGCGGCAGATGCACAACGGGACGCACGT...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp ATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGGTGTGTCCGAATCAGTaGTCCAGTGCCCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ILGKRIWPLGHALGLARWVCPNQ*SSARLF
Trigger: GAAGAGGCGGGCACTGGAGCACTGATTCGGACACAC...CCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR GCA 90 bp GAGAACGGCTGTTCCACATCGATCACGTACTTGGGGCCCTCCCGCTTCACCTTGGACAAAGGCCGGGGCTaGACTGATCAGGCGCGCAAC +
Preference number: 4 (lower is better)
Translates to: ENGCSTSITYLGPSRFTLDKGRG*TDQARN
Trigger: GTTGCGCGCCTGATCAGTGCAGCCCCGGCCTTTGTC...CAAGGTGAAGCGGGAGGGCCCCAAGTACGTGATCGATGTGGAACAGCCGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp GTTCCCGCACTCGGGGTAGCGCTCCAGGAGCAGTTGTGCCTCCAGCCGGCTCACAGCTTCTCCACGTGCTaGAAGTCCCGATTGCTATTG +
Preference number: 4 (lower is better)
Translates to: VPALGVALQEQLCLQPAHSFSTC*KSRLLL
Trigger: CAATAGCAATCGGGACTTCCAGCACGTGGAGAAGCT...GTGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGCTACCCCGAGTGCGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCGGGGGCAGCTTGTCCTaGCTAGACGCAGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: LILGKRIWPLGHALGLARGGSLS*LDAGDS
Trigger: GCTGTCACCTGCGTCTAGCCAGGACAAGCTGCCCCC...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp GCCCGCTGGTCCCTGGTGTGTCCGAATCAGTGCTCCAGTGCCCGCCTCTTCTCCCTGGGCCATCTCCAATaGGGGTCACGTAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: ARWSLVCPNQCSSARLFSLGHLQ*GSRSSL
Trigger: AAGAGAACTACGTGACCCCCATTGGAGATGGCCCAG...GGAGAAGAGGCGGGCACTGGAGCACTGATTCGGACACACCAGGGACCAGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp CCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGTCTCCAACGGGTGGCTTTaGAAGCTTGGCAGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: PGKKNLAAGPCPGTSPLVSNGWL*KLGRRL
Trigger: AAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGA...GACCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp CGAGGGTGTCTCCAGTGCACGGCGCGCCTCCTCTTTGGCCAAGACTTCAGACATGTGGGGAAGAGAGGCTaGGCTGAACTGACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RGCLQCTARLLFGQDFRHVGKRG*AELTGS
Trigger: GCTGCCAGTCAGTTCAGCCCAGCCTCTCTTCCCCAC...ATGTCTGAAGTCTTGGCCAAAGAGGAGGCGCGCCGTGCACTGGAGACACCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp AATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGTGGGGAAGAGAGGCTaGGCTGAACTGACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: NPGKKNLAAGPCPGTSPLVGKRG*AELTGS
Trigger: GCTGCCAGTCAGTTCAGCCCAGCCTCTCTTCCCCAC...CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCTGCCAGCCCGGCTGTaGGGAAGAGAGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VLILGKRIWPLGHALGLALPARL*GREAGL
Trigger: CAGCCCAGCCTCTCTTCCCCACAGCCGGGCTGGCAG...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp AATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGCTGGGACTAGCCCGCTaGTCCCTGGTGTGTCCGAAT +
Preference number: 4 (lower is better)
Translates to: NPGKKNLAAGPCPGTSPLLGLAR*SLVCPN
Trigger: ATTCGGACACACCAGGGACCAGCGGGCTAGTCCCAG...CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp CCAGTGCCCGCCTCTTCTCCAGCTTCTTCTGTAGCTCTGCCGTCATGTCTGCCAGGAAATCCCAGAGCCTaGGCTCCGGGACGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PVPASSPASSVALPSCLPGNPRA*APGRRS
Trigger: GGACCTTCGTCCCGGAGCCCAGGCTCTGGGATTTCC...TGGCAGACATGACGGCAGAGCTACAGAAGAAGCTGGAGAAGAGGCGGGCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCCATGTCTGCCAGCCCTaGCTTGGGTCCAACGGGTGG +
Preference number: 4 (lower is better)
Translates to: LILGKRIWPLGHALGLARHVCQP*LGSNGW
Trigger: CCACCCGTTGGACCCAAGCCAGGGCTGGCAGACATG...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601956.5
CDS-3UTR TCA 90 bp GGTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGTCAGGGCAGAGGCCATaGCGGAGCCAGGGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: GQSFNPGKKNLAAGPCPGSGQRP*RSQGLP
Trigger: CGGAAGACCCTGGCTCCGTCATGGCCTCTGCCCTGA...CCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp CCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGTCTGTAGAAATAAATGGTaGGACCCTGCAGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PGKKNLAAGPCPGTSPLVCRNKW*DPAGLP
Trigger: GGGCAGGCCTGCAGGGTCTCACCATTTATTTCTACA...GACCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp TTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGGGTGCCAGGGTCACGTaGGCTTCCCCAGGGAATCTC +
Preference number: 4 (lower is better)
Translates to: FNPGKKNLAAGPCPGTSPGARVT*ASPGNL
Trigger: GAGATTCCCTGGGGAAGCTCACGTGACCCTGGCACC...CGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp AGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCTGGCTAGACGCAGGTaGCAGCGGCTTGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: SFNPGKKNLAAGPCPGTSLARRR*QRLGAT
Trigger: GGTGGCCCCAAGCCGCTGTCACCTGCGTCTAGCCAG...GCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR TCA 90 bp TTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGGAGGCTGGGCTGAACTaGCTGGCAGCTTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: FNPGKKNLAAGPCPGTSPEAGLN*LAASCP
Trigger: TGGGCAGGAAGCTGCCAGTCAGTTCAGCCCAGCCTC...CGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp GAGAACGGCTGTTCCACATCGATCACGTACTTGGGGCCCTCCCGCTTCACCTTGAACCCTGCCAGGGACTaGGGGAAATCCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ENGCSTSITYLGPSRFTLNPARD*GKSQSL
Trigger: CAGGCTCTGGGATTTCCCTCAGTCCCTGGCAGGGTT...CAAGGTGAAGCGGGAGGGCCCCAAGTACGTGATCGATGTGGAACAGCCGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp CGGGGTAGCGCTCCAGGAGCAGTTGTGCCTCCAGCCGGCTCACCTTCAGGAAGCGACATCATGTATAGGTaGCCAGGAAGCAGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: RGSAPGAVVPPAGSPSGSDIMYR*PGSRVK
Trigger: CTTGACCCTGCTTCCTGGGCACCTATACATGATGTC...GCTTCCTGAAGGTGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGCTACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp CCAGTGCCCGCCTCTTCTCCAGCTTCTTCTGTAGCTCTGCCGTCATGTCTGCCACTCCAGGAGCAGTTGTaGCTCCAGCCGGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: PVPASSPASSVALPSCLPLQEQL*LQPAHL
Trigger: AAGGTGAGCCGGCTGGAGGCACAACTGCTCCTGGAG...TGGCAGACATGACGGCAGAGCTACAGAAGAAGCTGGAGAAGAGGCGGGCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp TTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGACGTGCGTCCCGTTGTaGATCTGCCGCGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: FNPGKKNLAAGPCPGTSPTCVPL*ICRVVT
Trigger: GGTCACCACGCGGCAGATGCACAACGGGACGCACGT...CGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp GTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGAGCTTGGGGCCACCTGTaGAGGGTGCAGGACCTGGGC +
Preference number: 4 (lower is better)
Translates to: VRVLILGKRIWPLGHALGAWGHL*RVQDLG
Trigger: GCCCAGGTCCTGCACCCTGCACAGGTGGCCCCAAGC...TCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR GCA 90 bp AGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTACTGGCCGCTGGGCCATaGCCTGGGACTAGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: RVLILGKRIWPLGHALGLLAAGP*PGTSPL
Trigger: CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAG...TAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp AGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGGCCTCTCCTTCCAGTaGGTGCCCCAGCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RVLILGKRIWPLGHALGLGLSFQ*VPQLGR
Trigger: CCGGCCCAGCTGGGGCACCCACTGGAAGGAGAGGCC...TAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp ATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGAGAATCAGGCTGAAGTaGGTGCCAGGGTCACGTGAG +
Preference number: 4 (lower is better)
Translates to: ILGKRIWPLGHALGLARWRIRLK*VPGSRE
Trigger: CTCACGTGACCCTGGCACCCACTTCAGCCTGATTCT...CCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp AATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGCATCGATCACGTACTTaGGGCCCTCCCGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: NPGKKNLAAGPCPGTSPLHRSRT*GPPASP
Trigger: AGGTGAAGCGGGAGGGCCCCAAGTACGTGATCGATG...CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp GGTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGCAGGTGACAGCGGCTTaGGGCCACCTGTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GQSFNPGKKNLAAGPCPGQVTAA*GHLCRV
Trigger: CACCCTGCACAGGTGGCCCCAAGCCGCTGTCACCTG...CCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp AATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGCTTGGGTCCAACGGGTaGCTTTGGAAGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: NPGKKNLAAGPCPGTSPLLGSNG*LWKLGR
Trigger: CCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAG...CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp AGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCTGCCAGCCCGGCTGTaGGGAAGAGAGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SFNPGKKNLAAGPCPGTSLPARL*GREAGL
Trigger: CAGCCCAGCCTCTCTTCCCCACAGCCGGGCTGGCAG...GCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCCTGGGACTAGCCCGCTaGTCCCTGGTGTGTCCGAAT +
Preference number: 4 (lower is better)
Translates to: LILGKRIWPLGHALGLARLGLAR*SLVCPN
Trigger: ATTCGGACACACCAGGGACCAGCGGGCTAGTCCCAG...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp AATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGCTGGGAAAAAGAATCTaGCCGCTGGGCCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: NPGKKNLAAGPCPGTSPLLGKRI*PLGHAL
Trigger: CAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAG...CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp ATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGCCTTCTCTACTGGCTTaGGTCCAACGGGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ILGKRIWPLGHALGLARWPSLLA*VQRVAL
Trigger: CAAAGCCACCCGTTGGACCCAAGCCAGTAGAGAAGG...CCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600324.5
CDS-3UTR TCA 90 bp GTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGATCAGGGCAGAGGCCATaGCGGAGCCAGGGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: VRVLILGKRIWPLGHALGSGQRP*RSQGLP
Trigger: CGGAAGACCCTGGCTCCGTCATGGCCTCTGCCCTGA...TCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp TGGGCCGCAGCAGCAGGTTCCCGCACTCGGGGTAGCGCTCCAGGAGCAGTTGTGAGGGAATCTCATCTGTaGGTTTCTCAAATGCTCCCA +
Preference number: 4 (lower is better)
Translates to: WAAAAGSRTRGSAPGAVVRESHL*VSQMLP
Trigger: TGGGAGCATTTGAGAAACTCACAGATGAGATTCCCT...CACAACTGCTCCTGGAGCGCTACCCCGAGTGCGGGAACCTGCTGCTGCGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR TCA 90 bp AGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTACTGGCTAGACGCAGGTaGCAGCGGCTTGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: RVLILGKRIWPLGHALGLLARRR*QRLGAT
Trigger: GGTGGCCCCAAGCCGCTGTCACCTGCGTCTAGCCAG...TAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR TCA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCGAAGAGAGGCTGGGCTaGACTGACTGGCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LILGKRIWPLGHALGLAREERLG*TDWQLP
Trigger: AGGAAGCTGCCAGTCAGTTCAGCCCAGCCTCTCTTC...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp TCTCGCCATTCTCCTTATCGGCTTCCACGTAGCCTAGCACCTTCTCGTAGTCCTAAAGCCACCCGCACTTaGGCCCATCCCACGGCGTCC +
Preference number: 4 (lower is better)
Translates to: SRHSPYRLPRSLAPSRSPKATRT*AHPTAS
Trigger: GGACGCCGTGGGATGGGCTCAAGTGCGGGTGGCTTT...AGGACTACGAGAAGGTGCTAGGCTACGTGGAAGCCGATAAGGAGAATGGCGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp TTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCGGCGTCCAGGGAGGTaGAAGAGAACGGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: FNPGKKNLAAGPCPGTSPRRPGR*KRTAVP
Trigger: TGGAACAGCCGTTCTCTTGCACCTCCCTGGACGCCG...CGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp AGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCTTGGGGCCACCTGTaGAGGGTGCAGGACCTGGGC +
Preference number: 4 (lower is better)
Translates to: RVLILGKRIWPLGHALGLAWGHL*RVQDLG
Trigger: GCCCAGGTCCTGCACCCTGCACAGGTGGCCCCAAGC...TAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR GCA 90 bp GGTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGCTCTGCCGTCATGTCTaGCAGCCCGGCTGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GQSFNPGKKNLAAGPCPGLCRHV*QPGCGE
Trigger: TTCCCCACAGCCGGGCTGGCAGACATGACGGCAGAG...CCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCGTGTGTCCGAATCAGTaGTCCAGTGCCCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LILGKRIWPLGHALGLARVCPNQ*SSARLF
Trigger: GAAGAGGCGGGCACTGGAGCACTGATTCGGACACAC...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR GCA 90 bp CAGACATCATGTATAGGTGCCCAGGAAGCAGGGTCAAGTCGGTCGGGACACGGATTCCCACTTCCCGACTaGGGTCTGGGCAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: QTSCIGAQEAGSSRSGHGFPLPD*GLGKAT
Trigger: GGTGGCTTTGCCCAGACCGCAGTCGGGAAGTGGGAA...TCCGTGTCCCGACCGACTTGACCCTGCTTCCTGGGCACCTATACATGATGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCAGTGGGTGCCCCAGCTaGGCCGGGAAGCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: VLILGKRIWPLGHALGLASGCPS*AGKLRN
Trigger: GTTTCTCAGCTTCCCGGCCCAGCTGGGGCACCCACT...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594605.6
ENST00000599736.5
CDS-3UTR CCA 90 bp AGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCTTGGGGACACGGGGTaGCCTCAGGGCAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: SFNPGKKNLAAGPCPGTSLGDTG*PQGRGH
Trigger: ATGGCCTCTGCCCTGAGGCCACCCCGTGTCCCCAAG...GCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp GTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTTGGGGACACGGGGTaGCCTCAGGGCAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: VRVLILGKRIWPLGHALGLGDTG*PQGRGH
Trigger: ATGGCCTCTGCCCTGAGGCCACCCCGTGTCCCCAAG...TCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp CTGGGCAACATGGTGAAACCCCTTCTCTGGCTTGGGTCCAACGGGTGGCTTTGGCATCGATCACGTACTTaGGGCCCTCCCGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: LGNMVKPLLWLGSNGWLWHRSRT*GPPASP
Trigger: AGGTGAAGCGGGAGGGCCCCAAGTACGTGATCGATG...CCAAAGCCACCCGTTGGACCCAAGCCAGAGAAGGGGTTTCACCATGTTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp CGGGGTAGCGCTCCAGGAGCAGTTGTGCCTCCAGCCGGCTCACCTTCAGGAAGCGCACCAGCGCCTTTTTaGTATGCGACACGAAATAGT +
Preference number: 4 (lower is better)
Translates to: RGSAPGAVVPPAGSPSGSAPAPF*YATRNS
Trigger: ACTATTTCGTGTCGCATACCAAAAAGGCGCTGGTGC...GCTTCCTGAAGGTGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGCTACCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp AGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCAGGTGACAGCGGCTTaGGGCCACCTGTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SFNPGKKNLAAGPCPGTSQVTAA*GHLCRV
Trigger: CACCCTGCACAGGTGGCCCCAAGCCGCTGTCACCTG...GCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp AATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGTCCAACGGGTGGCTTTaGAAGCTTGGCAGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: NPGKKNLAAGPCPGTSPLSNGWL*KLGRRL
Trigger: AAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGA...CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp CCAGTGCCCGCCTCTTCTCCAGCTTCTTCTGTAGCTCTGCCGTCATGTCTGCCACTTGTAATCCTGTCCTaGCCTTCGCCCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PVPASSPASSVALPSCLPLVILS*PSPQQL
Trigger: CAGCTGCTGGGGCGAAGGCCAGGACAGGATTACAAG...TGGCAGACATGACGGCAGAGCTACAGAAGAAGCTGGAGAAGAGGCGGGCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp CTGGGCAACATGGTGAAACCCCTTCTCTGGCTTGGGTCCAACGGGTGGCTTTGGGTGAAACCCCTTCTCTaGCTTGGGTCCAACGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGNMVKPLLWLGSNGWLWVKPLL*LGSNGW
Trigger: CCACCCGTTGGACCCAAGCCAGAGAAGGGGTTTCAC...CCAAAGCCACCCGTTGGACCCAAGCCAGAGAAGGGGTTTCACCATGTTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR TCA 90 bp CAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTGGTGCCAGGGTCACGTaGGCTTCCCCAGGGAATCTC +
Preference number: 4 (lower is better)
Translates to: QSFNPGKKNLAAGPCPGTGARVT*ASPGNL
Trigger: GAGATTCCCTGGGGAAGCTCACGTGACCCTGGCACC...AGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp TCTCGCCATTCTCCTTATCGGCTTCCACGTAGCCTAGCACCTTCTCGTAGTCCTGGTGCCAGGGTCACGTaGGCTTCCCCAGGGAATCTC +
Preference number: 4 (lower is better)
Translates to: SRHSPYRLPRSLAPSRSPGARVT*ASPGNL
Trigger: GAGATTCCCTGGGGAAGCTCACGTGACCCTGGCACC...AGGACTACGAGAAGGTGCTAGGCTACGTGGAAGCCGATAAGGAGAATGGCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCTCCAGGAGCAGTTGTaGCTCCAGCCGGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: VLILGKRIWPLGHALGLALQEQL*LQPAHL
Trigger: AAGGTGAGCCGGCTGGAGGCACAACTGCTCCTGGAG...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp GACTGGCAGCTTCCTGCCCAAGCCACCATTAAAGACTTTGGGCTCTGGAAGAGAGTCCCGTTGTGCATCTaGCGCGTGGTGACCGACACG +
Preference number: 4 (lower is better)
Translates to: DWQLPAQATIKDFGLWKRVPLCI*RVVTDT
Trigger: CGTGTCGGTCACCACGCGGCAGATGCACAACGGGAC...TCTCTTCCAGAGCCCAAAGTCTTTAATGGTGGCTTGGGCAGGAAGCTGCCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp GGTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGCGGCGTCCAGGGAGGTaGAAGAGAACGGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: GQSFNPGKKNLAAGPCPGRRPGR*KRTAVP
Trigger: TGGAACAGCCGTTCTCTTGCACCTCCCTGGACGCCG...CCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp CTCATAGTCAACAGCTGGGCCATCTCCAATGGGGGTCACGTAGTTCTCTTCCTGCTCTGCCGTCATGTCTaGCAGCCCGGCTGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LIVNSWAISNGGHVVLFLLCRHV*QPGCGE
Trigger: TTCCCCACAGCCGGGCTGGCAGACATGACGGCAGAG...CAGGAAGAGAACTACGTGACCCCCATTGGAGATGGCCCAGCTGTTGACTATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp GTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTCTGCCGTCATGTCTaGCAGCCCGGCTGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: VRVLILGKRIWPLGHALGLCRHV*QPGCGE
Trigger: TTCCCCACAGCCGGGCTGGCAGACATGACGGCAGAG...TCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp CTGGGCAACATGGTGAAACCCCTTCTCTGGCTTGGGTCCAACGGGTGGCTTTGGCCGGACTTTCAACCCTaGCAGGGACTGAGGGAAATC +
Preference number: 4 (lower is better)
Translates to: LGNMVKPLLWLGSNGWLWPDFQP*QGLREI
Trigger: GATTTCCCTCAGTCCCTGGCAGGGTTGAAAGTCCGG...CCAAAGCCACCCGTTGGACCCAAGCCAGAGAAGGGGTTTCACCATGTTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp TCTCGCCATTCTCCTTATCGGCTTCCACGTAGCCTAGCACCTTCTCGTAGTCCTAGTGGGTGCCCCAGCTaGGCCGGGAAGCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: SRHSPYRLPRSLAPSRSPSGCPS*AGKLRN
Trigger: GTTTCTCAGCTTCCCGGCCCAGCTGGGGCACCCACT...AGGACTACGAGAAGGTGCTAGGCTACGTGGAAGCCGATAAGGAGAATGGCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp GTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACCAGGGTCTTCCGCCTaGCCTCTCCTTCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: VRVLILGKRIWPLGHALGPGSSA*PLLPVG
Trigger: ACCCACTGGAAGGAGAGGCCAGGCGGAAGACCCTGG...TCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp CAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTGGGGGCAGCTTGTCCTaGCTAGACGCAGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: QSFNPGKKNLAAGPCPGTGGSLS*LDAGDS
Trigger: GCTGTCACCTGCGTCTAGCCAGGACAAGCTGCCCCC...AGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp GGTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGGTGGGGAAGAGAGGCTaGGCTGAACTGACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GQSFNPGKKNLAAGPCPGVGKRG*AELTGS
Trigger: GCTGCCAGTCAGTTCAGCCCAGCCTCTCTTCCCCAC...CCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCTGGGACTAGCCCGCTaGTCCCTGGTGTGTCCGAAT +
Preference number: 4 (lower is better)
Translates to: VLILGKRIWPLGHALGLALGLAR*SLVCPN
Trigger: ATTCGGACACACCAGGGACCAGCGGGCTAGTCCCAG...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp TTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGGAAAAAGAATCTaGCCGCTGGGCCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: FNPGKKNLAAGPCPGTSPLGKRI*PLGHAL
Trigger: CAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAG...CGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
3UTR CAA 72 bp CACGAGGGTGTCTCCAGTGCACGGCGCGCCTCCTCTTaGGCCAAGACTTCAGACATCATGTATAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: HEGVSSARRASS*AKTSDIMYRCP
Trigger: TGGGCACCTATACATGATGTCTGAAGTCTTGGCCAAAGAGGAGGCGCGCCGTGCACTGGAGACACCCTCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR TCA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCGCTCTCATAGTAGTGTaGAGGCAGGACACCCTTAGG +
Preference number: 4 (lower is better)
Translates to: LILGKRIWPLGHALGLARALIVV*RQDTLR
Trigger: CCTAAGGGTGTCCTGCCTTCACACTACTATGAGAGC...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGTAGAAATAAATGGTaGGACCCTGCAGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LILGKRIWPLGHALGLARCRNKW*DPAGLP
Trigger: GGGCAGGCCTGCAGGGTCTCACCATTTATTTCTACA...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCCAAATGCTCCCAAGTTaGGCTTCTCCACGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LILGKRIWPLGHALGLARQMLPS*ASPRAG
Trigger: TCCAGCACGTGGAGAAGCTCAACTTGGGAGCATTTG...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp AATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGTTGAACTTGATCTCCTaGTCCCGGAGAATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NPGKKNLAAGPCPGTSPLLNLIS*SRRIRL
Trigger: CAGCCTGATTCTCCGGGATCAGGAGATCAAGTTCAA...CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp GTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGAGCGACACGAAATAGTTaGCCACGGCGTCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VRVLILGKRIWPLGHALGATRNS*PRRPGR
Trigger: CCTCCCTGGACGCCGTGGTCAACTATTTCGTGTCGC...TCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp CAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTGCGACACGAAATAGTTaGCCACGGCGTCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QSFNPGKKNLAAGPCPGTATRNS*PRRPGR
Trigger: CCTCCCTGGACGCCGTGGTCAACTATTTCGTGTCGC...AGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp CAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTGCTGGGCCGGGAAGCTaGGAAACAGGTTTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: QSFNPGKKNLAAGPCPGTAGPGS*ETGFRG
Trigger: TCCCCTGAAACCTGTTTCTCAGCTTCCCGGCCCAGC...AGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp AGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTACGAGGGTGTCTCCAGTaGACGGCGCGCCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RVLILGKRIWPLGHALGLRGCLQ*TARLLF
Trigger: AAAGAGGAGGCGCGCCGTGCACTGGAGACACCCTCG...TAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp CAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTCGGCGTCCAGGGAGGTaGAAGAGAACGGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: QSFNPGKKNLAAGPCPGTRRPGR*KRTAVP
Trigger: TGGAACAGCCGTTCTCTTGCACCTCCCTGGACGCCG...AGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp CTCATAGTCAACAGCTGGGCCATCTCCAATGGGGGTCACGTAGTTCTCTTCCTGCGGCGTCCAGGGAGGTaGAAGAGAACGGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LIVNSWAISNGGHVVLFLRRPGR*KRTAVP
Trigger: TGGAACAGCCGTTCTCTTGCACCTCCCTGGACGCCG...CAGGAAGAGAACTACGTGACCCCCATTGGAGATGGCCCAGCTGTTGACTATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp TTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGAGAATCAGGCTGAAGTaGGTGCCAGGGTCACGTGAG +
Preference number: 4 (lower is better)
Translates to: FNPGKKNLAAGPCPGTSPRIRLK*VPGSRE
Trigger: CTCACGTGACCCTGGCACCCACTTCAGCCTGATTCT...CGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCATCGATCACGTACTTaGGGCCCTCCCGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: VLILGKRIWPLGHALGLAHRSRT*GPPASP
Trigger: AGGTGAAGCGGGAGGGCCCCAAGTACGTGATCGATG...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp GGTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGCATCGATCACGTACTTaGGGCCCTCCCGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: GQSFNPGKKNLAAGPCPGHRSRT*GPPASP
Trigger: AGGTGAAGCGGGAGGGCCCCAAGTACGTGATCGATG...CCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp ATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGGCACCAGCGCCTTTTTaGTATGCGACACGAAATAGT +
Preference number: 4 (lower is better)
Translates to: ILGKRIWPLGHALGLARWAPAPF*YATRNS
Trigger: ACTATTTCGTGTCGCATACCAAAAAGGCGCTGGTGC...CCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGCTTCAGGATGACTaGCCAACTAGAGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LILGKRIWPLGHALGLARWLQDD*PTRGSH
Trigger: GTGGCTTCCTCTAGTTGGCCAGTCATCCTGAAGCCA...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp ATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGCTTTGGCAACTTCTTTaGCTTCAGGATGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: ILGKRIWPLGHALGLARWLWQLL*LQDDWP
Trigger: TGGCCAGTCATCCTGAAGCCAAAGAAGTTGCCAAAG...CCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp GGTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGCTTGGGTCCAACGGGTaGCTTTGGAAGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GQSFNPGKKNLAAGPCPGLGSNG*LWKLGR
Trigger: CCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAG...CCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp CAGCGCCTTTTTGGTATGCGACACGAAATAGTTGACCACGGCGTCCAGGGAGGTCTTGGGTCCAACGGGTaGCTTTGGAAGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: QRLFGMRHEIVDHGVQGGLGSNG*LWKLGR
Trigger: CCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAG...ACCTCCCTGGACGCCGTGGTCAACTATTTCGTGTCGCATACCAAAAAGGCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCTTTGGGCTCTGGCTTaGGTCCAACGGGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VLILGKRIWPLGHALGLALWALA*VQRVAL
Trigger: CAAAGCCACCCGTTGGACCCAAGCCAGAGCCCAAAG...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594605.6
CDS-3UTR CCA 90 bp GTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTGGGACTAGCCCGCTaGTCCCTGGTGTGTCCGAAT +
Preference number: 4 (lower is better)
Translates to: VRVLILGKRIWPLGHALGLGLAR*SLVCPN
Trigger: ATTCGGACACACCAGGGACCAGCGGGCTAGTCCCAG...TCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp TTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGAAACCCCTTCTCTACTaGCTTGGGTCCAACGGGTGG +
Preference number: 4 (lower is better)
Translates to: FNPGKKNLAAGPCPGTSPKPLLY*LGSNGW
Trigger: CCACCCGTTGGACCCAAGCCAGTAGAGAAGGGGTTT...CGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600324.5
CDS-3UTR TCA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTTGAACTTGATCTCCTaGTCCCGGAGAATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LILGKRIWPLGHALGLARLNLIS*SRRIRL
Trigger: CAGCCTGATTCTCCGGGATCAGGAGATCAAGTTCAA...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCCCACCACCGTTAAGATaGAGCCTTTCCACATTTCCC +
Preference number: 4 (lower is better)
Translates to: LILGKRIWPLGHALGLARPPPLR*SLSTFP
Trigger: GGGAAATGTGGAAAGGCTTCATCTTAACGGTGGTGG...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp AGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCGAAGAGAGGCTGGGCTaGACTGACTGGCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SFNPGKKNLAAGPCPGTSEERLG*TDWQLP
Trigger: AGGAAGCTGCCAGTCAGTTCAGCCCAGCCTCTCTTC...GCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp CTCATAGTCAACAGCTGGGCCATCTCCAATGGGGGTCACGTAGTTCTCTTCCTGGAAGAGAGGCTGGGCTaGACTGACTGGCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LIVNSWAISNGGHVVLFLEERLG*TDWQLP
Trigger: AGGAAGCTGCCAGTCAGTTCAGCCCAGCCTCTCTTC...CAGGAAGAGAACTACGTGACCCCCATTGGAGATGGCCCAGCTGTTGACTATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp CAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTGTGTGTCCGAATCAGTaGTCCAGTGCCCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QSFNPGKKNLAAGPCPGTVCPNQ*SSARLF
Trigger: GAAGAGGCGGGCACTGGAGCACTGATTCGGACACAC...AGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR GCA 90 bp AGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCGTGTGTCCGAATCAGTaGTCCAGTGCCCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SFNPGKKNLAAGPCPGTSVCPNQ*SSARLF
Trigger: GAAGAGGCGGGCACTGGAGCACTGATTCGGACACAC...GCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR GCA 90 bp GACTGGCAGCTTCCTGCCCAAGCCACCATTAAAGACTTTGGGCTCTGGAAGAGAGTGTGTCCGAATCAGTaGTCCAGTGCCCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: DWQLPAQATIKDFGLWKRVCPNQ*SSARLF
Trigger: GAAGAGGCGGGCACTGGAGCACTGATTCGGACACAC...TCTCTTCCAGAGCCCAAAGTCTTTAATGGTGGCTTGGGCAGGAAGCTGCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp TTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGGCCATCTCCAATaGGGGTCACGTAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: FNPGKKNLAAGPCPGTSPLGHLQ*GSRSSL
Trigger: AAGAGAACTACGTGACCCCCATTGGAGATGGCCCAG...CGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp GTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTTGGGTCCAACGGGTaGCTTTGGAAGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VRVLILGKRIWPLGHALGLGSNG*LWKLGR
Trigger: CCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAG...TCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp AGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCTGGGAAAAAGAATCTaGCCGCTGGGCCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: SFNPGKKNLAAGPCPGTSLGKRI*PLGHAL
Trigger: CAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAG...GCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
3UTR CAA 72 bp GAAACCCCTTCTCTGGCTTGGGTCCAACGGGTGGCTTaGGAAGCTTGGCAGGAGGCTTTGGCAACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: ETPSLAWVQRVA*EAWQEALATSL
Trigger: CAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAGCCAGAGAAGGGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR TCA 90 bp AGTGCACGGCGCGCCTCCTCTTTGGCCAAGACTTCAGACATCATGTATAGGTGCTGTAGAAATAAATGGTaGGACCCTGCAGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SARRASSLAKTSDIMYRCCRNKW*DPAGLP
Trigger: GGGCAGGCCTGCAGGGTCTCACCATTTATTTCTACA...GCACCTATACATGATGTCTGAAGTCTTGGCCAAAGAGGAGGCGCGCCGTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR TCA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCAAATGCTCCCAAGTTaGGCTTCTCCACGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VLILGKRIWPLGHALGLAQMLPS*ASPRAG
Trigger: TCCAGCACGTGGAGAAGCTCAACTTGGGAGCATTTG...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp TATCGGCTTCCACGTAGCCTAGCACCTTCTCGTAGTCCTCGTCTAACAGGAATGCTTCGCCCCAGCAGCTaGGGTTCACGGAGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: YRLPRSLAPSRSPRLTGMLRPSS*GSRSFS
Trigger: GGAAAAACTCCGTGAACCTCAGCTGCTGGGGCGAAG...CATTCCTGTTAGACGAGGACTACGAGAAGGTGCTAGGCTACGTGGAAGCCGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp TTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGAGCTTCTCCACGTGCTaGAAGTCCCGATTGCTATTG +
Preference number: 4 (lower is better)
Translates to: FNPGKKNLAAGPCPGTSPSFSTC*KSRLLL
Trigger: CAATAGCAATCGGGACTTCCAGCACGTGGAGAAGCT...CGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp AGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCAGAATCAGGCTGAAGTaGGTGCCAGGGTCACGTGAG +
Preference number: 4 (lower is better)
Translates to: SFNPGKKNLAAGPCPGTSRIRLK*VPGSRE
Trigger: CTCACGTGACCCTGGCACCCACTTCAGCCTGATTCT...GCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCTGGCTTCAGGATGACTaGCCAACTAGAGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: VLILGKRIWPLGHALGLAWLQDD*PTRGSH
Trigger: GTGGCTTCCTCTAGTTGGCCAGTCATCCTGAAGCCA...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp CTCATAGTCAACAGCTGGGCCATCTCCAATGGGGGTCACGTAGTTCTCTTCCTGTCCAACGGGTGGCTTTaGAAGCTTGGCAGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LIVNSWAISNGGHVVLFLSNGWL*KLGRRL
Trigger: AAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGA...CAGGAAGAGAACTACGTGACCCCCATTGGAGATGGCCCAGCTGTTGACTATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp AGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCAAAGACTTTGGGCTCTaGCTTGGGTCCAACGGGTGG +
Preference number: 4 (lower is better)
Translates to: SFNPGKKNLAAGPCPGTSKDFGL*LGSNGW
Trigger: CCACCCGTTGGACCCAAGCCAGAGCCCAAAGTCTTT...GCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594605.6
CDS-3UTR CCA 90 bp AGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTACTGGGAAAAAGAATCTaGCCGCTGGGCCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: RVLILGKRIWPLGHALGLLGKRI*PLGHAL
Trigger: CAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAG...TAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp TATCGGCTTCCACGTAGCCTAGCACCTTCTCGTAGTCCTCGTCTAACAGGAATGCTGGGAAAAAGAATCTaGCCGCTGGGCCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: YRLPRSLAPSRSPRLTGMLGKRI*PLGHAL
Trigger: CAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAG...CATTCCTGTTAGACGAGGACTACGAGAAGGTGCTAGGCTACGTGGAAGCCGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp AGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAACCCCTTCTCTGGCTTaGGTCCAACGGGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RVLILGKRIWPLGHALGLTPSLA*VQRVAL
Trigger: CAAAGCCACCCGTTGGACCCAAGCCAGAGAAGGGGT...TAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp GGTCCCTGGTGTGTCCGAATCAGTGCTCCAGTGCCCGCCTCTTCTCCAGCTTCTAAAGACTTTGGGCTCTaGAAGAGAAGACAGATGAGG +
Preference number: 4 (lower is better)
Translates to: GPWCVRISAPVPASSPASKDFGL*KRRQMR
Trigger: CCTCATCTGTCTTCTCTTCCAGAGCCCAAAGTCTTT...AGAAGCTGGAGAAGAGGCGGGCACTGGAGCACTGATTCGGACACACCAGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR TCA 90 bp AGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCGCTCTCATAGTAGTGTaGAGGCAGGACACCCTTAGG +
Preference number: 4 (lower is better)
Translates to: SFNPGKKNLAAGPCPGTSALIVV*RQDTLR
Trigger: CCTAAGGGTGTCCTGCCTTCACACTACTATGAGAGC...GCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp GACTGGCAGCTTCCTGCCCAAGCCACCATTAAAGACTTTGGGCTCTGGAAGAGACAAATGCTCCCAAGTTaGGCTTCTCCACGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: DWQLPAQATIKDFGLWKRQMLPS*ASPRAG
Trigger: TCCAGCACGTGGAGAAGCTCAACTTGGGAGCATTTG...TCTCTTCCAGAGCCCAAAGTCTTTAATGGTGGCTTGGGCAGGAAGCTGCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR TCA 90 bp GGTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGCCACCACCGTTAAGATaGAGCCTTTCCACATTTCCC +
Preference number: 4 (lower is better)
Translates to: GQSFNPGKKNLAAGPCPGPPPLR*SLSTFP
Trigger: GGGAAATGTGGAAAGGCTTCATCTTAACGGTGGTGG...CCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp TTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGGCACCAGCGCCTTTTTaGTATGCGACACGAAATAGT +
Preference number: 4 (lower is better)
Translates to: FNPGKKNLAAGPCPGTSPAPAPF*YATRNS
Trigger: ACTATTTCGTGTCGCATACCAAAAAGGCGCTGGTGC...CGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp CAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTCTGGGCCATCTCCAATaGGGGTCACGTAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: QSFNPGKKNLAAGPCPGTLGHLQ*GSRSSL
Trigger: AAGAGAACTACGTGACCCCCATTGGAGATGGCCCAG...AGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp AGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCTGGGCCATCTCCAATaGGGGTCACGTAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SFNPGKKNLAAGPCPGTSLGHLQ*GSRSSL
Trigger: AAGAGAACTACGTGACCCCCATTGGAGATGGCCCAG...GCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp GTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGATGGCTTCAGGATGACTaGCCAACTAGAGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: VRVLILGKRIWPLGHALGWLQDD*PTRGSH
Trigger: GTGGCTTCCTCTAGTTGGCCAGTCATCCTGAAGCCA...TCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCTTGGCAGGAGGCTTTaGCAACTTCTTTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: VLILGKRIWPLGHALGLALGRRL*QLLWLQ
Trigger: CTGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAG...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR TCA 90 bp TTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGAGGGAATCTCATCTGTaGGTTTCTCAAATGCTCCCA +
Preference number: 4 (lower is better)
Translates to: FNPGKKNLAAGPCPGTSPRESHL*VSQMLP
Trigger: TGGGAGCATTTGAGAAACTCACAGATGAGATTCCCT...CGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp CTCATAGTCAACAGCTGGGCCATCTCCAATGGGGGTCACGTAGTTCTCTTCCTGTTGAACTTGATCTCCTaGTCCCGGAGAATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LIVNSWAISNGGHVVLFLLNLIS*SRRIRL
Trigger: CAGCCTGATTCTCCGGGATCAGGAGATCAAGTTCAA...CAGGAAGAGAACTACGTGACCCCCATTGGAGATGGCCCAGCTGTTGACTATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR TCA 90 bp CAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTCCACCACCGTTAAGATaGAGCCTTTCCACATTTCCC +
Preference number: 4 (lower is better)
Translates to: QSFNPGKKNLAAGPCPGTPPPLR*SLSTFP
Trigger: GGGAAATGTGGAAAGGCTTCATCTTAACGGTGGTGG...AGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR TCA 90 bp AGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGTCAAGTCTTCTTCCTaGGAACATTCCCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: RVLILGKRIWPLGHALGLVKSSS*EHSRAP
Trigger: GGGTGCTCGGGAATGTTCTCAGGAAGAAGACTTGAC...TAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGTGAGTTTCTCAAATaGTCCCAAGTTGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LILGKRIWPLGHALGLARCEFLK*SQVELL
Trigger: GAGAAGCTCAACTTGGGAGCATTTGAGAAACTCACA...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp CCACATCGATCACGTACTTGGGGCCCTCCCGCTTCACCTTGTAATGCCGGACCATGTGAGTTTCTCAAATaGTCCCAAGTTGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PHRSRTWGPPASPCNAGPCEFLK*SQVELL
Trigger: GAGAAGCTCAACTTGGGAGCATTTGAGAAACTCACA...TGGTCCGGCATTACAAGGTGAAGCGGGAGGGCCCCAAGTACGTGATCGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp AGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCGACATCATGTATAGGTaGCCAGGAAGCAGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: SFNPGKKNLAAGPCPGTSDIMYR*PGSRVK
Trigger: CTTGACCCTGCTTCCTGGGCACCTATACATGATGTC...GCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp CTGGGCAACATGGTGAAACCCCTTCTCTGGCTTGGGTCCAACGGGTGGCTTTGGTGTGGAACCAGCTCTTaGTCTATGTCAAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LGNMVKPLLWLGSNGWLWCGTSS*SMSSLL
Trigger: AAGAAGACTTGACATAGAGCAAGAGCTGGTTCCACA...CCAAAGCCACCCGTTGGACCCAAGCCAGAGAAGGGGTTTCACCATGTTGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp AGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCAGCTTCTCCACGTGCTaGAAGTCCCGATTGCTATTG +
Preference number: 4 (lower is better)
Translates to: SFNPGKKNLAAGPCPGTSSFSTC*KSRLLL
Trigger: CAATAGCAATCGGGACTTCCAGCACGTGGAGAAGCT...GCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp GGTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGGCACCAGCGCCTTTTTaGTATGCGACACGAAATAGT +
Preference number: 4 (lower is better)
Translates to: GQSFNPGKKNLAAGPCPGAPAPF*YATRNS
Trigger: ACTATTTCGTGTCGCATACCAAAAAGGCGCTGGTGC...CCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp AGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTATGGCTTCAGGATGACTaGCCAACTAGAGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: RVLILGKRIWPLGHALGLWLQDD*PTRGSH
Trigger: GTGGCTTCCTCTAGTTGGCCAGTCATCCTGAAGCCA...TAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCTTTGGCAACTTCTTTaGCTTCAGGATGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: VLILGKRIWPLGHALGLALWQLL*LQDDWP
Trigger: TGGCCAGTCATCCTGAAGCCAAAGAAGTTGCCAAAG...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp CAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTCTTGGCAGGAGGCTTTaGCAACTTCTTTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QSFNPGKKNLAAGPCPGTLGRRL*QLLWLQ
Trigger: CTGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAG...AGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CCA 90 bp GTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTTGGCAGGAGGCTTTaGCAACTTCTTTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: VRVLILGKRIWPLGHALGLGRRL*QLLWLQ
Trigger: CTGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAG...TCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR TCA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCAGGGAATCTCATCTGTaGGTTTCTCAAATGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VLILGKRIWPLGHALGLARESHL*VSQMLP
Trigger: TGGGAGCATTTGAGAAACTCACAGATGAGATTCCCT...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CCA 90 bp CTCATAGTCAACAGCTGGGCCATCTCCAATGGGGGTCACGTAGTTCTCTTCCTGCTTTGGCAACTTCTTTaGCTTCAGGATGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: LIVNSWAISNGGHVVLFLLWQLL*LQDDWP
Trigger: TGGCCAGTCATCCTGAAGCCAAAGAAGTTGCCAAAG...CAGGAAGAGAACTACGTGACCCCCATTGGAGATGGCCCAGCTGTTGACTATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CCA 90 bp CAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAAAGACTTTGGGCTCTaGAAGAGAAGACAGATGAGG +
Preference number: 4 (lower is better)
Translates to: QSFNPGKKNLAAGPCPGTKDFGL*KRRQMR
Trigger: CCTCATCTGTCTTCTCTTCCAGAGCCCAAAGTCTTT...AGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp CAGCGCCTTTTTGGTATGCGACACGAAATAGTTGACCACGGCGTCCAGGGAGGTGCTGGAAGTCCCGATTaGTATTGTAGAAATAAATGG +
Preference number: 4 (lower is better)
Translates to: QRLFGMRHEIVDHGVQGGAGSPD*YCRNKW
Trigger: CCATTTATTTCTACAATAGCAATCGGGACTTCCAGC...ACCTCCCTGGACGCCGTGGTCAACTATTTCGTGTCGCATACCAAAAAGGCGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR GCA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCGCTGGAAGTCCCGATTaGTATTGTAGAAATAAATGG +
Preference number: 4 (lower is better)
Translates to: VLILGKRIWPLGHALGLAAGSPD*YCRNKW
Trigger: CCATTTATTTCTACAATAGCAATCGGGACTTCCAGC...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR GCA 90 bp AGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCTGGAAGTCCCGATTaGTATTGTAGAAATAAATGG +
Preference number: 4 (lower is better)
Translates to: RVLILGKRIWPLGHALGLAGSPD*YCRNKW
Trigger: CCATTTATTTCTACAATAGCAATCGGGACTTCCAGC...TAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS GCA 90 bp CAGCAGCAGGTTCCCGCACTCGGGGTAGCGCTCCAGGAGCAGTTGTaGCTCCAGCCGGCTCACCTTCAGGAAGCACCTGTGGCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: QQQVPALGVALQEQL*LQPAHLQEAPVAGR
Trigger: GCGGCCCGCCACAGGTGCTTCCTGAAGGTGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGCTACCCCGAGTGCGGGAACCTGCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601179.1
CDS-3UTR CAA 90 bp CCCGTTGTGCATCTGCCGCGTGGTGACCGACACGCCGTCGGCGCCGTCCCCGCTCGGCGCGCCTCCTCTTaGGCCAAGACTTCAGACATC +
Preference number: 5 (lower is better)
Translates to: PVVHLPRGDRHAVGAVPARRASS*AKTSDI
Trigger: GATGTCTGAAGTCTTGGCCAAAGAGGAGGCGCGCCG...AGCGGGGACGGCGCCGACGGCGTGTCGGTCACCACGCGGCAGATGCACAACGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS CCA 90 bp TCCCCCGCACCCCTACTGTCCAGTTCCCACTTCCCGACTGCGGTCTaGGCAAAGCCACCCGCACTTGAGCCCATCCCACGGCGTCCCGGA +
Preference number: 5 (lower is better)
Translates to: SPAPLLSSSHFPTAV*AKPPALEPIPRRPG
Trigger: TCCGGGACGCCGTGGGATGGGCTCAAGTGCGGGTGGCTTTGCCCAGACCGCAGTCGGGAAGTGGGAACTGGACAGTAGGGGTGCGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS TCA 90 bp CAGTTCCCACTTCCCGACTGCGGTCTGGGCAAAGCCACCCGCACTTaGGCCCATCCCACGGCGTCCCGGAGCTTTAGGAAGTCCCCATCC +
Preference number: 5 (lower is better)
Translates to: QFPLPDCGLGKATRT*AHPTASRSFRKSPS
Trigger: GGATGGGGACTTCCTAAAGCTCCGGGACGCCGTGGGATGGGCTCAAGTGCGGGTGGCTTTGCCCAGACCGCAGTCGGGAAGTGGGAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CAA 90 bp ATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGACCACGTGCGTCCCGTaGTGCATCTGCCGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: ILGKRIWPLGHALGLARWTTCVP*CICRVV
Trigger: CACCACGCGGCAGATGCACAACGGGACGCACGTGGT...CCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CAA 90 bp CCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGTCCGGCGCGCCTCCTCTTaGGCCAAGACTTCAGACATC +
Preference number: 5 (lower is better)
Translates to: PGKKNLAAGPCPGTSPLVRRASS*AKTSDI
Trigger: GATGTCTGAAGTCTTGGCCAAAGAGGAGGCGCGCCG...GACCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CAA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCGCGCTCCAGGAGCAGTaGTGCCTCCAGCCGGCTCAC +
Preference number: 5 (lower is better)
Translates to: LILGKRIWPLGHALGLARALQEQ*CLQPAH
Trigger: GTGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGC...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CAA 90 bp CCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGTCACATCGATCACGTACTaGGGGCCCTCCCGCTTCACC +
Preference number: 5 (lower is better)
Translates to: PGKKNLAAGPCPGTSPLVTSITY*GPSRFT
Trigger: GGTGAAGCGGGAGGGCCCCAAGTACGTGATCGATGT...GACCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CAA 90 bp GCCCGCTGGTCCCTGGTGTGTCCGAATCAGTGCTCCAGTGCCCGCCTCTTCTCCAACCCCTTCTCTGGCTaGGGTCCAACGGGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: ARWSLVCPNQCSSARLFSNPFSG*GPTGGF
Trigger: AAAGCCACCCGTTGGACCCAAGCCAGAGAAGGGGTT...GGAGAAGAGGCGGGCACTGGAGCACTGATTCGGACACACCAGGGACCAGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CAA 90 bp CTGGGCAACATGGTGAAACCCCTTCTCTGGCTTGGGTCCAACGGGTGGCTTTGGACCACGTGCGTCCCGTaGTGCATCTGCCGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: LGNMVKPLLWLGSNGWLWTTCVP*CICRVV
Trigger: CACCACGCGGCAGATGCACAACGGGACGCACGTGGT...CCAAAGCCACCCGTTGGACCCAAGCCAGAGAAGGGGTTTCACCATGTTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CAA 90 bp ATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGACATCGATCACGTACTaGGGGCCCTCCCGCTTCACC +
Preference number: 5 (lower is better)
Translates to: ILGKRIWPLGHALGLARWTSITY*GPSRFT
Trigger: GGTGAAGCGGGAGGGCCCCAAGTACGTGATCGATGT...CCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CAA 90 bp CAGGGTGCAGGACCTGGGCCCGGAGCGGAGGGCGCCACCCACACATTCTCGCCACCACCATTAAAGACTTaGGGCTCTGGAAGAGAAGAC +
Preference number: 5 (lower is better)
Translates to: QGAGPGPGAEGATHTFSPPPLKT*GSGRED
Trigger: GTCTTCTCTTCCAGAGCCCAAAGTCTTTAATGGTGG...TGGCGAGAATGTGTGGGTGGCGCCCTCCGCTCCGGGCCCAGGTCCTGCACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS TCA 90 bp AGCTTTAGGAAGTCCCCATCCCGGACTTTCAACCCTGCCAGGGACTaGGGGAAATCCCAGAGCCTGGGCTCCGGGACGAAGGTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: SFRKSPSRTFNPARD*GKSQSLGSGTKVPG
Trigger: TCCTGGGACCTTCGTCCCGGAGCCCAGGCTCTGGGATTTCCCTCAGTCCCTGGCAGGGTTGAAAGTCCGGGATGGGGACTTCCTAAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS CCA 90 bp CCACGTGCGTCGAGGGTGTCTCCAGTGCACGGCGCGCCTCCTCTTTaGCCAAGACTTCAGACATCATGTATAGGTGCCCAGGAAGCAGGG +
Preference number: 5 (lower is better)
Translates to: PRASRVSPVHGAPPL*PRLQTSCIGAQEAG
Trigger: CCCTGCTTCCTGGGCACCTATACATGATGTCTGAAGTCTTGGCCAAAGAGGAGGCGCGCCGTGCACTGGAGACACCCTCGACGCACGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601482.1
CDS CCA 90 bp CCAGGGAGGTGCAAGAGAACGGCTGTTCCACATCGATCACGTACTTaGGGCCCTCCCGCTTCACCTTGTAATGCCGGACCACGTGCGTCG +
Preference number: 5 (lower is better)
Translates to: PGRCKRTAVPHRSRT*GPPASPCNAGPRAS
Trigger: CGACGCACGTGGTCCGGCATTACAAGGTGAAGCGGGAGGGCCCCAAGTACGTGATCGATGTGGAACAGCCGTTCTCTTGCACCTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601482.1
CDS-3UTR CAA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCGCGCTCCAGGAGCAGTaGTGCCTCCAGCCGGCTCAC +
Preference number: 5 (lower is better)
Translates to: VLILGKRIWPLGHALGLAALQEQ*CLQPAH
Trigger: GTGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGC...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CAA 90 bp AATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGTCCAACGGGTGGCTTaGGAAGCTTGGCAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: NPGKKNLAAGPCPGTSPLVQRVA*EAWQEA
Trigger: AGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGAC...CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CAA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTCTGCCAGCCCTGGCTaGGGTCCAACGGGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: LILGKRIWPLGHALGLARSASPG*GPTGGF
Trigger: AAAGCCACCCGTTGGACCCAAGCCAGGGCTGGCAGA...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601956.5
CDS-3UTR CAA 90 bp CTCATAGTCAACAGCTGGGCCATCTCCAATGGGGGTCACGTAGTTCTCTTCCTGGCGCTCCAGGAGCAGTaGTGCCTCCAGCCGGCTCAC +
Preference number: 5 (lower is better)
Translates to: LIVNSWAISNGGHVVLFLALQEQ*CLQPAH
Trigger: GTGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGC...CAGGAAGAGAACTACGTGACCCCCATTGGAGATGGCCCAGCTGTTGACTATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CAA 90 bp GGTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACCACGTGCGTCCCGTaGTGCATCTGCCGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: GQSFNPGKKNLAAGPCPGTTCVP*CICRVV
Trigger: CACCACGCGGCAGATGCACAACGGGACGCACGTGGT...CCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CAA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCGGCAGTGGGGGCAGCTaGTCCTGGCTAGACGCAGGT +
Preference number: 5 (lower is better)
Translates to: VLILGKRIWPLGHALGLAGSGGS*SWLDAG
Trigger: ACCTGCGTCTAGCCAGGACAAGCTGCCCCCACTGCC...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CAA 90 bp GGTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGGGCAGTGGGGGCAGCTaGTCCTGGCTAGACGCAGGT +
Preference number: 5 (lower is better)
Translates to: GQSFNPGKKNLAAGPCPGGSGGS*SWLDAG
Trigger: ACCTGCGTCTAGCCAGGACAAGCTGCCCCCACTGCC...CCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CAA 90 bp AATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGACTTTGGGCTCTGGCTaGGGTCCAACGGGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: NPGKKNLAAGPCPGTSPLTLGSG*GPTGGF
Trigger: AAAGCCACCCGTTGGACCCAAGCCAGAGCCCAAAGT...CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594605.6
CDS-3UTR CAA 90 bp GGTTCCCGCACTCGGGGTAGCGCTCCAGGAGCAGTTGTGCCTCCAGCCGGCTCAGTGTGGAACCAGCTCTaGCTCTATGTCAAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: GSRTRGSAPGAVVPPAGSVWNQL*LYVKSS
Trigger: AGAAGACTTGACATAGAGCAAGAGCTGGTTCCACAC...TGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGCTACCCCGAGTGCGGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CAA 90 bp AGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCACCACGTGCGTCCCGTaGTGCATCTGCCGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: SFNPGKKNLAAGPCPGTSTTCVP*CICRVV
Trigger: CACCACGCGGCAGATGCACAACGGGACGCACGTGGT...GCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CAA 90 bp GACTGGCAGCTTCCTGCCCAAGCCACCATTAAAGACTTTGGGCTCTGGAAGAGAGGCAGTGGGGGCAGCTaGTCCTGGCTAGACGCAGGT +
Preference number: 5 (lower is better)
Translates to: DWQLPAQATIKDFGLWKRGSGGS*SWLDAG
Trigger: ACCTGCGTCTAGCCAGGACAAGCTGCCCCCACTGCC...TCTCTTCCAGAGCCCAAAGTCTTTAATGGTGGCTTGGGCAGGAAGCTGCCAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CAA 90 bp CAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTCAAAGCCACCCGCACTaGAGCCCATCCCACGGCGTC +
Preference number: 5 (lower is better)
Translates to: QSFNPGKKNLAAGPCPGTQSHPH*SPSHGV
Trigger: GACGCCGTGGGATGGGCTCAAGTGCGGGTGGCTTTG...AGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CAA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCCCCTTCTCTACTGGCTaGGGTCCAACGGGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: LILGKRIWPLGHALGLARPFSTG*GPTGGF
Trigger: AAAGCCACCCGTTGGACCCAAGCCAGTAGAGAAGGG...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600324.5
CDS CCA 90 bp AACGGGTGGCTTTGGAAGCTTGGCAGGAGGCTTTGGCAACTTCTTTaGCTTCAGGATGACTGGCCAACTAGAGGAAGCCACTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: NGWLWKLGRRLWQLL*LQDDWPTRGSHWAR
Trigger: CCGGGCCCAGTGGCTTCCTCTAGTTGGCCAGTCATCCTGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596242.5
CDS-3UTR CAA 90 bp GGTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACATCGATCACGTACTaGGGGCCCTCCCGCTTCACC +
Preference number: 5 (lower is better)
Translates to: GQSFNPGKKNLAAGPCPGTSITY*GPSRFT
Trigger: GGTGAAGCGGGAGGGCCCCAAGTACGTGATCGATGT...CCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CAA 90 bp AGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGGCAGTGGGGGCAGCTaGTCCTGGCTAGACGCAGGT +
Preference number: 5 (lower is better)
Translates to: RVLILGKRIWPLGHALGLGSGGS*SWLDAG
Trigger: ACCTGCGTCTAGCCAGGACAAGCTGCCCCCACTGCC...TAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CAA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCGTCCAACGGGTGGCTTaGGAAGCTTGGCAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: VLILGKRIWPLGHALGLAVQRVA*EAWQEA
Trigger: AGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGAC...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CAA 90 bp AATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGCCACCATTAAAGACTTaGGGCTCTGGCTTGGGTCCA +
Preference number: 5 (lower is better)
Translates to: NPGKKNLAAGPCPGTSPLPPLKT*GSGLGP
Trigger: TGGACCCAAGCCAGAGCCCAAAGTCTTTAATGGTGG...CAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594605.6
CDS-3UTR CAA 90 bp CCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCTGGTCCCACCATTAAAGACTTaGGGCTCTGGAAGAGAAGAC +
Preference number: 5 (lower is better)
Translates to: PGKKNLAAGPCPGTSPLVPPLKT*GSGRED
Trigger: GTCTTCTCTTCCAGAGCCCAAAGTCTTTAATGGTGG...GACCAGCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599736.5
ENST00000600324.5
CDS TCA 90 bp ACAGGAATGGCACCAGCGCCTTTTTGGTATGCGACACGAAATAGTTaGCCACGGCGTCCAGGGAGGTGCAAGAGAACTGGGGGCAGATGG +
Preference number: 5 (lower is better)
Translates to: TGMAPAPFWYATRNS*PRRPGRCKRTGGRW
Trigger: CCATCTGCCCCCAGTTCTCTTGCACCTCCCTGGACGCCGTGGTCAACTATTTCGTGTCGCATACCAAAAAGGCGCTGGTGCCATTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596242.5
CDS-3UTR CAA 90 bp CAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTGTCCAACGGGTGGCTTaGGAAGCTTGGCAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: QSFNPGKKNLAAGPCPGTVQRVA*EAWQEA
Trigger: AGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGAC...AGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CAA 90 bp AGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAACATCGATCACGTACTaGGGGCCCTCCCGCTTCACC +
Preference number: 5 (lower is better)
Translates to: RVLILGKRIWPLGHALGLTSITY*GPSRFT
Trigger: GGTGAAGCGGGAGGGCCCCAAGTACGTGATCGATGT...TAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000598443.5
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CAA 90 bp CAGACATCATGTATAGGTGCCCAGGAAGCAGGGTCAAGTCGGTCGGGACACGGAGCTTGGCAGGAGGCTTaGGCAACTTCTTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: QTSCIGAQEAGSSRSGHGAWQEA*ATSLAS
Trigger: TGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAGC...TCCGTGTCCCGACCGACTTGACCCTGCTTCCTGGGCACCTATACATGATGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CAA 90 bp TTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGGCTTGGCAGGAGGCTTaGGCAACTTCTTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: FNPGKKNLAAGPCPGTSPAWQEA*ATSLAS
Trigger: TGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAGC...CGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CAA 90 bp AGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTACCACCATTAAAGACTTaGGGCTCTGGGCCCGGAGCG +
Preference number: 5 (lower is better)
Translates to: RVLILGKRIWPLGHALGLPPLKT*GSGPGA
Trigger: CGCTCCGGGCCCAGAGCCCAAAGTCTTTAATGGTGG...TAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598443.5
CDS-3UTR CAA 90 bp GTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCTCAAATGCTCCCAAGTaGAGCTTCTCCACGTGCTGG +
Preference number: 5 (lower is better)
Translates to: VLILGKRIWPLGHALGLASNAPK*SFSTCW
Trigger: CCAGCACGTGGAGAAGCTCAACTTGGGAGCATTTGA...GGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CAA 90 bp CTGGGCAACATGGTGAAACCCCTTCTCTGGCTTGGGTCCAACGGGTGGCTTTGGAGAGGAAGCCACATCTaGGTTCTCATAGTCAACAGC +
Preference number: 5 (lower is better)
Translates to: LGNMVKPLLWLGSNGWLWRGSHI*VLIVNS
Trigger: GCTGTTGACTATGAGAACCAAGATGTGGCTTCCTCT...CCAAAGCCACCCGTTGGACCCAAGCCAGAGAAGGGGTTTCACCATGTTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS-3UTR CAA 90 bp TTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCCCGCAGAGGAAGCCACATCTaGGTTCTCATAGTCAACAGC +
Preference number: 5 (lower is better)
Translates to: LILGKRIWPLGHALGLARRGSHI*VLIVNS
Trigger: GCTGTTGACTATGAGAACCAAGATGTGGCTTCCTCT...GCGGGCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CAA 90 bp GGTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGGCTTGGCAGGAGGCTTaGGCAACTTCTTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: GQSFNPGKKNLAAGPCPGAWQEA*ATSLAS
Trigger: TGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAGC...CCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS-3UTR CAA 90 bp AGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGACTAGCTCAAATGCTCCCAAGTaGAGCTTCTCCACGTGCTGG +
Preference number: 5 (lower is better)
Translates to: SFNPGKKNLAAGPCPGTSSNAPK*SFSTCW
Trigger: CCAGCACGTGGAGAAGCTCAACTTGGGAGCATTTGA...GCTAGTCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS-3UTR CAA 90 bp ACTTCAGACATCATGTATAGGTGCCCAGGAAGCAGGGTCAAGTCGGTCGGGACATCAAATGCTCCCAAGTaGAGCTTCTCCACGTGCTGG +
Preference number: 5 (lower is better)
Translates to: TSDIMYRCPGSRVKSVGTSNAPK*SFSTCW
Trigger: CCAGCACGTGGAGAAGCTCAACTTGGGAGCATTTGA...TGTCCCGACCGACTTGACCCTGCTTCCTGGGCACCTATACATGATGTCTGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS TCA 90 bp TCTCCACGTGCTGGAAGTCCCGATTGCTATTGTAGAAATAAATGGTaGGACCCTGCAGGCCTGCCCAGAACTTCTTGTAATCCCGGTCAC +
Preference number: 5 (lower is better)
Translates to: SPRAGSPDCYCRNKW*DPAGLPRTSCNPGH
Trigger: GTGACCGGGATTACAAGAAGTTCTGGGCAGGCCTGCAGGGTCTCACCATTTATTTCTACAATAGCAATCGGGACTTCCAGCACGTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000600324.5
ENST00000601482.1
CDS-3UTR CAA 90 bp GTCAGAGTTTTAATCCTGGGAAAAAGAATCTGGCCGCTGGGCCATGCCCTGGGAAGAGGAAGCCACATCTaGGTTCTCATAGTCAACAGC +
Preference number: 5 (lower is better)
Translates to: VRVLILGKRIWPLGHALGRGSHI*VLIVNS
Trigger: GCTGTTGACTATGAGAACCAAGATGTGGCTTCCTCT...TCCCAGGGCATGGCCCAGCGGCCAGATTCTTTTTCCCAGGATTAAAACTCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601956.5
CDS TCA 90 bp TCTCCACGTGCTGGAAGTCCCGATTGCTATTGTAGAAATAAATGGTaGGACCCTGCAGGCCTGCCCAGAACTTCTTGTAATCCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: SPRAGSPDCYCRNKW*DPAGLPRTSCNPVL
Trigger: CAGGACAGGATTACAAGAAGTTCTGGGCAGGCCTGCAGGGTCTCACCATTTATTTCTACAATAGCAATCGGGACTTCCAGCACGTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS CCA 72 bp AGGGCAGAGGCCATGACGGAGCCAGGGTCTTCCGCCTaGCCTCTCCTTCCAGTGGGTGCCCCAGCTGGGCCG +
Preference number: 6 (lower is better)
Translates to: RAEAMTEPGSSA*PLLPVGAPAGP
Trigger: CGGCCCAGCTGGGGCACCCACTGGAAGGAGAGGCCAGGCGGAAGACCCTGGCTCCGTCATGGCCTCTGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
CDS CAA 90 bp CCGCAGCAGCAGGTTCCCGCACTCGGGGTAGCGCTCCAGGAGCAGTaGTGCCTCCAGCCGGCTCACCTTCAGGAAGCACCTGTGGCGGGC +
Preference number: 6 (lower is better)
Translates to: PQQQVPALGVALQEQ*CLQPAHLQEAPVAG
Trigger: GCCCGCCACAGGTGCTTCCTGAAGGTGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGCTACCCCGAGTGCGGGAACCTGCTGCTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601179.1
CDS TCA 72 bp CAGAAACAGGGTAGGGGACAAAGGCCGGGGCTGCACTaGTCAGGCGCGCAACGAGCCCGGCCCTGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: QKQGRGQRPGLH*SGAQRARPCLL
Trigger: CAGGAGGCAGGGCCGGGCTCGTTGCGCGCCTGATCAGTGCAGCCCCGGCCTTTGTCCCCTACCCTGTTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS TCA 72 bp CTTCCCGACTGCGGTCTGGGCAAAGCCACCCGCACTTaGGCCCATCCCACGGCGTCCCGGAGCTTTAGGAAG +
Preference number: 6 (lower is better)
Translates to: LPDCGLGKATRT*AHPTASRSFRK
Trigger: CTTCCTAAAGCTCCGGGACGCCGTGGGATGGGCTCAAGTGCGGGTGGCTTTGCCCAGACCGCAGTCGGGAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS CCA 72 bp CCCCTACTGTCCAGTTCCCACTTCCCGACTGCGGTCTaGGCAAAGCCACCCGCACTTGAGCCCATCCCACGG +
Preference number: 6 (lower is better)
Translates to: PLLSSSHFPTAV*AKPPALEPIPR
Trigger: CCGTGGGATGGGCTCAAGTGCGGGTGGCTTTGCCCAGACCGCAGTCGGGAAGTGGGAACTGGACAGTAGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS CAA 72 bp CAGGTTCCCGCACTCGGGGTAGCGCTCCAGGAGCAGTaGTGCCTCCAGCCGGCTCACCTTCAGGAAGCACCT +
Preference number: 6 (lower is better)
Translates to: QVPALGVALQEQ*CLQPAHLQEAP
Trigger: AGGTGCTTCCTGAAGGTGAGCCGGCTGGAGGCACAACTGCTCCTGGAGCGCTACCCCGAGTGCGGGAACCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601179.1
CDS TCA 72 bp AAGTCCCCATCCCGGACTTTCAACCCTGCCAGGGACTaGGGGAAATCCCAGAGCCTGGGCTCCGGGACGAAG +
Preference number: 6 (lower is better)
Translates to: KSPSRTFNPARD*GKSQSLGSGTK
Trigger: CTTCGTCCCGGAGCCCAGGCTCTGGGATTTCCCTCAGTCCCTGGCAGGGTTGAAAGTCCGGGATGGGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS GCA 72 bp GTAATGCCGGACCACGTGCGTCGAGGGTGTCTCCAGTaGACGGCGCGCCTCCTCTTTGGCCAAGACTTCAGA +
Preference number: 6 (lower is better)
Translates to: VMPDHVRRGCLQ*TARLLFGQDFR
Trigger: TCTGAAGTCTTGGCCAAAGAGGAGGCGCGCCGTGCACTGGAGACACCCTCGACGCACGTGGTCCGGCATTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601482.1
CDS CAA 90 bp GGGGGACCCCAACCTGGCTTGGGTCCAACGGGTGGCTTTGGAAGCTaGGCAGGAGGCTTTGGCAACTTCTTTGGCTTCAGGATGACTGGC +
Preference number: 6 (lower is better)
Translates to: GGPQPGLGPTGGFGS*AGGFGNFFGFRMTG
Trigger: GCCAGTCATCCTGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAGCCAGGTTGGGGTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596242.5
ENST00000602007.5
CDS CAA 90 bp ACCACGTGCGTCGAGGGTGTCTCCAGTGCACGGCGCGCCTCCTCTTaGGCCAAGACTTCAGACATCATGTATAGGTGCCCAGGAAGCAGG +
Preference number: 6 (lower is better)
Translates to: TTCVEGVSSARRASS*AKTSDIMYRCPGSR
Trigger: CCTGCTTCCTGGGCACCTATACATGATGTCTGAAGTCTTGGCCAAAGAGGAGGCGCGCCGTGCACTGGAGACACCCTCGACGCACGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601482.1
CDS CAA 72 bp GGGGACCCCAACCTGGCTTGGGTCCAACGGGTGGCTTaGGAAGCTTGGCAGGAGGCTTTGGCAACTTCTTTG +
Preference number: 6 (lower is better)
Translates to: GDPNLAWVQRVA*EAWQEALATSL
Trigger: CAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAGCCAGGTTGGGGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596242.5
ENST00000602007.5
CDS CAA 90 bp ATGTCTGCCAGCCCTGGCTTGGGTCCAACGGGTGGCTTTGGAAGCTaGGCAGGAGGCTTTGGCAACTTCTTTGGCTTCAGGATGACTGGC +
Preference number: 6 (lower is better)
Translates to: MSASPGLGPTGGFGS*AGGFGNFFGFRMTG
Trigger: GCCAGTCATCCTGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAGCCAGGGCTGGCAGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601956.5
CDS CCA 72 bp AGGAGGCTTTGGCAACTTCTTTGGCTTCAGGATGACTaGCCAACTAGAGGAAGCCACTGGGCCCGGAGCGGA +
Preference number: 6 (lower is better)
Translates to: RRLWQLLWLQDD*PTRGSHWARSG
Trigger: TCCGCTCCGGGCCCAGTGGCTTCCTCTAGTTGGCCAGTCATCCTGAAGCCAAAGAAGTTGCCAAAGCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596242.5
CDS CAA 72 bp TGTCTGCCAGCCCTGGCTTGGGTCCAACGGGTGGCTTaGGAAGCTTGGCAGGAGGCTTTGGCAACTTCTTTG +
Preference number: 6 (lower is better)
Translates to: CLPALAWVQRVA*EAWQEALATSL
Trigger: CAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAGCCAGGGCTGGCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601956.5
CDS CAA 72 bp GTCGAGGGTGTCTCCAGTGCACGGCGCGCCTCCTCTTaGGCCAAGACTTCAGACATCATGTATAGGTGCCCA +
Preference number: 6 (lower is better)
Translates to: VEGVSSARRASS*AKTSDIMYRCP
Trigger: TGGGCACCTATACATGATGTCTGAAGTCTTGGCCAAAGAGGAGGCGCGCCGTGCACTGGAGACACCCTCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601482.1
CDS TCA 72 bp GCACCAGCGCCTTTTTGGTATGCGACACGAAATAGTTaGCCACGGCGTCCAGGGAGGTGCAAGAGAACTGGG +
Preference number: 6 (lower is better)
Translates to: APAPFWYATRNS*PRRPGRCKRTG
Trigger: CCCAGTTCTCTTGCACCTCCCTGGACGCCGTGGTCAACTATTTCGTGTCGCATACCAAAAAGGCGCTGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596242.5
CDS CAA 90 bp AAGACTTTGGGCTCTGGCTTGGGTCCAACGGGTGGCTTTGGAAGCTaGGCAGGAGGCTTTGGCAACTTCTTTGGCTTCAGGATGACTGGC +
Preference number: 6 (lower is better)
Translates to: KTLGSGLGPTGGFGS*AGGFGNFFGFRMTG
Trigger: GCCAGTCATCCTGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAGCCAGAGCCCAAAGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594605.6
CDS CAA 90 bp AACCCCTTCTCTACTGGCTTGGGTCCAACGGGTGGCTTTGGAAGCTaGGCAGGAGGCTTTGGCAACTTCTTTGGCTTCAGGATGACTGGC +
Preference number: 6 (lower is better)
Translates to: NPFSTGLGPTGGFGS*AGGFGNFFGFRMTG
Trigger: GCCAGTCATCCTGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAGCCAGTAGAGAAGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597593.5
ENST00000600324.5
CDS TCA 72 bp CGACACTCCAAGGTCTCTACCTTGAACTTGATCTCCTaGTCCCGGAGAATCAGGCTGAAGTGGGTGCCAGGG +
Preference number: 6 (lower is better)
Translates to: RHSKVSTLNLIS*SRRIRLKWVPG
Trigger: CCCTGGCACCCACTTCAGCCTGATTCTCCGGGATCAGGAGATCAAGTTCAAGGTAGAGACCTTGGAGTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601482.1
CDS TCA 72 bp TGGAACCAGCTCTTGCTCTATGTCAAGTCTTCTTCCTaGGAACATTCCCGAGCACCCTGGAGAGCCTCCCCC +
Preference number: 6 (lower is better)
Translates to: WNQLLLYVKSSS*EHSRAPWRASP
Trigger: GGGGGAGGCTCTCCAGGGTGCTCGGGAATGTTCTCAGGAAGAAGACTTGACATAGAGCAAGAGCTGGTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS CAA 72 bp AGACTTTGGGCTCTGGCTTGGGTCCAACGGGTGGCTTaGGAAGCTTGGCAGGAGGCTTTGGCAACTTCTTTG +
Preference number: 6 (lower is better)
Translates to: RLWALAWVQRVA*EAWQEALATSL
Trigger: CAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAGCCAGAGCCCAAAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594605.6
CDS CAA 72 bp ACCCCTTCTCTACTGGCTTGGGTCCAACGGGTGGCTTaGGAAGCTTGGCAGGAGGCTTTGGCAACTTCTTTG +
Preference number: 6 (lower is better)
Translates to: TPSLLAWVQRVA*EAWQEALATSL
Trigger: CAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAGCCAGTAGAGAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597593.5
ENST00000600324.5
CDS CAA 90 bp CATGGTGAAACCCCTTCTCTACTGGCTTGGGTCCAACGGGTGGCTTaGGAAGCTTGGCAGGAGGCTTTGGCAACTTCTTTGGCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: HGETPSLLAWVQRVA*EAWQEALATSLASG
Trigger: TCCTGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAGCCAGTAGAGAAGGGGTTTCACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597593.5
ENST00000600324.5
CDS GCA 72 bp GCTATTGTAGAAATAAATGGTGAGACCCTGCAGGCCTaGCCAGAACTTCTTGTAATCCCGGTCACAGGGCCC +
Preference number: 6 (lower is better)
Translates to: AIVEINGETLQA*PELLVIPVTGP
Trigger: GGGCCCTGTGACCGGGATTACAAGAAGTTCTGGGCAGGCCTGCAGGGTCTCACCATTTATTTCTACAATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594605.6
ENST00000600324.5
ENST00000601482.1
CDS GCA 72 bp GCTATTGTAGAAATAAATGGTGAGACCCTGCAGGCCTaGCCAGAACTTCTTGTAATCCTGTCCTGGCCTTCG +
Preference number: 6 (lower is better)
Translates to: AIVEINGETLQA*PELLVILSWPS
Trigger: CGAAGGCCAGGACAGGATTACAAGAAGTTCTGGGCAGGCCTGCAGGGTCTCACCATTTATTTCTACAATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599736.5
CDS CAA 72 bp GGAATCTCATCTGTGAGTTTCTCAAATGCTCCCAAGTaGAGCTTCTCCACGTGCTGGAAGTCCCGATTGCTA +
Preference number: 6 (lower is better)
Translates to: GISSVSFSNAPK*SFSTCWKSRLL
Trigger: TAGCAATCGGGACTTCCAGCACGTGGAGAAGCTCAACTTGGGAGCATTTGAGAAACTCACAGATGAGATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594605.6
ENST00000599736.5
ENST00000600324.5
ENST00000601482.1