RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STAB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000136011

Ensembl transcript IDs: ENST00000388887.7, ENST00000548073.1, ENST00000548579.1, ENST00000549474.1, ENST00000549798.1, ENST00000552777.1

Found 706 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTaGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGAT +
Preference number: 1 (lower is better)
Translates to: QRKKSQRVRGGSCTG*AQQHISHPQKQPPD
Trigger: ATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
3UTR CCA 90 bp AGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTaGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCC +
Preference number: 1 (lower is better)
Translates to: STKEEEPKGQRRKLY*VGTATHLSPTETTP
Trigger: GGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
3UTR TCA 90 bp ATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCAGCTaGAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGC +
Preference number: 1 (lower is better)
Translates to: ITVTHHVGQNGAGAS*RVQRKKSQRVRGGS
Trigger: GCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
3UTR CCA 90 bp CTAACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATaGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAG +
Preference number: 1 (lower is better)
Translates to: LTGKKDHSYPSCRAE*SRCQLKSTKEEEPK
Trigger: CTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
3UTR TCA 90 bp CACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATaGGGTATGGCTTCTGAGTGCTTAAAGGACTTTACGTTCCTAAAA +
Preference number: 1 (lower is better)
Translates to: HISHPQKQPPDQPER*GMASECLKDFTFLK
Trigger: TTTTAGGAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
3UTR CCA 90 bp AATCAGGCAGGTGGAATATATCCAGGCTGGATATGGTTTTGGATATaGAATCTCTCTTCTCTGACAAGATTTCTTGCTGCGGTCCTCAAC +
Preference number: 1 (lower is better)
Translates to: NQAGGIYPGWIWFWI*NLSSLTRFLAAVLN
Trigger: GTTGAGGACCGCAGCAAGAAATCTTGTCAGAGAAGAGAGATTCCATATCCAAAACCATATCCAGCCTGGATATATTCCACCTGCCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549474.1
3UTR CCA 90 bp AAAGGAAATCAGGCAGGTGGAATATATCCAGGCTGGATATGGTTTTaGATATGGAATCTCTCTTCTCTGACAAGATTTCTTGCTGCGGTC +
Preference number: 1 (lower is better)
Translates to: KGNQAGGIYPGWIWF*IWNLSSLTRFLAAV
Trigger: GACCGCAGCAAGAAATCTTGTCAGAGAAGAGAGATTCCATATCCAAAACCATATCCAGCCTGGATATATTCCACCTGCCTGATTTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549474.1
3UTR CCA 90 bp ACTATAAAAGGAAATCAGGCAGGTGGAATATATCCAGGCTGGATATaGTTTTGGATATGGAATCTCTCTTCTCTGACAAGATTTCTTGCT +
Preference number: 1 (lower is better)
Translates to: TIKGNQAGGIYPGWI*FWIWNLSSLTRFLA
Trigger: AGCAAGAAATCTTGTCAGAGAAGAGAGATTCCATATCCAAAACCATATCCAGCCTGGATATATTCCACCTGCCTGATTTCCTTTTATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549474.1
3UTR CCA 90 bp ACTTCAACTATAAAAGGAAATCAGGCAGGTGGAATATATCCAGGCTaGATATGGTTTTGGATATGGAATCTCTCTTCTCTGACAAGATTT +
Preference number: 1 (lower is better)
Translates to: TSTIKGNQAGGIYPG*IWFWIWNLSSLTRF
Trigger: AAATCTTGTCAGAGAAGAGAGATTCCATATCCAAAACCATATCCAGCCTGGATATATTCCACCTGCCTGATTTCCTTTTATAGTTGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549474.1
3UTR-3UTR TCA 90 bp GGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACATGGCCCAGGTGGCAGTaGGTGATGGCTGGCATCTCC +
Preference number: 2 (lower is better)
Translates to: GQRRKLYWVGTATHLSPTWPRWQ*VMAGIS
Trigger: GGAGATGCCAGCCATCACTCACTGCCACCTGGGCCA...TGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
3UTR-3UTR CCA 90 bp GCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCGCAGTGAGTGATGGCTaGCATCTCCCGTCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: AKGSEEEAVLGGHSNTSLAVSDG*HLPSRP
Trigger: GGGCCTGGACGGGAGATGCCAGCCATCACTCACTGC...GAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
3UTR-3UTR TCA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCGATCAGCCAGAGAGATaGGGTATGGCTTCTGAGTGC +
Preference number: 2 (lower is better)
Translates to: QGRKITVTHHVGQNGAGADQPER*GMASEC
Trigger: GCACTCAGAAGCCATACCTCATCTCTCTGGCTGATC...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
3UTR-3UTR TCA 90 bp CAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGATGAGGTATGGCTTCTaGGTGCTTAAAGGACTTTAC +
Preference number: 2 (lower is better)
Translates to: QRKKSQRVRGGSCTGWAQMRYGF*VLKGLY
Trigger: GTAAAGTCCTTTAAGCACTCAGAAGCCATACCTCAT...CTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
3UTR-3UTR TCA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTAAAGGCAACTGGTGCTaGGAATTCACAGTTGATGGC +
Preference number: 2 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGAKGNWC*EFTVDG
Trigger: GCCATCAACTGTGAATTCTCAGCACCAGTTGCCTTT...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
3UTR CAA 90 bp AAAAGGAAATCAGGCAGGTGGAATATATCCAGGCTGGATATGGTTTaGGATATGGAATCTCTCTTCTCTGACAAGATTTCTTGCTGCGGT +
Preference number: 2 (lower is better)
Translates to: KRKSGRWNISRLDMV*DMESLFSDKISCCG
Trigger: ACCGCAGCAAGAAATCTTGTCAGAGAAGAGAGATTCCATATCCAAAACCATATCCAGCCTGGATATATTCCACCTGCCTGATTTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549474.1
3UTR-3UTR CAA 90 bp AGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGGCTGAGAATTCACAGTaGATGGCCCAGGTGGCAGTG +
Preference number: 3 (lower is better)
Translates to: RCQLKSTKEEEPKGQRRKAENSQ*MAQVAV
Trigger: CACTGCCACCTGGGCCATCAACTGTGAATTCTCAGC...CTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
3UTR TCA 72 bp CACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATaGGGTATGGCTTCTGAGTGCTTAAAGGACTTTACG +
Preference number: 3 (lower is better)
Translates to: HPQKQPPDQPER*GMASECLKDFT
Trigger: CGTAAAGTCCTTTAAGCACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
3UTR TCA 72 bp TTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTaGGAATTCACAGTTGATGGCCCAGGTGGCAGTGAG +
Preference number: 3 (lower is better)
Translates to: LKDFTFLKGNWC*EFTVDGPGGSE
Trigger: CTCACTGCCACCTGGGCCATCAACTGTGAATTCTCAGCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
3UTR TCA 72 bp ACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTaGGTGCTTAAAGGACTTTACGTTCCTAAAAGGCAA +
Preference number: 3 (lower is better)
Translates to: TPRSAREMRYGF*VLKGLYVPKRQ
Trigger: TTGCCTTTTAGGAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
3UTR CCA 72 bp ATAAAAGGAAATCAGGCAGGTGGAATATATCCAGGCTaGATATGGTTTTGGATATGGAATCTCTCTTCTCTG +
Preference number: 3 (lower is better)
Translates to: IKGNQAGGIYPG*IWFWIWNLSSL
Trigger: CAGAGAAGAGAGATTCCATATCCAAAACCATATCCAGCCTGGATATATTCCACCTGCCTGATTTCCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549474.1
CDS-3UTR TCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCATGGCCCAGGTGGCAGTaGGTGATGGCTGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSWPRWQ*VMAGIS
Trigger: GGAGATGCCAGCCATCACTCACTGCCACCTGGGCCA...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR CCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCAGCAGTGAGTGATGGCTaGCATCTCCCGTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSAVSDG*HLPSRP
Trigger: GGGCCTGGACGGGAGATGCCAGCCATCACTCACTGC...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR CCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCAGCTGCTGCCTTGTGTTaGGAGGCAGGATGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSAAALC*EAGWAG
Trigger: CCCAGCCCATCCTGCCTCCCAACACAAGGCAGCAGC...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR TCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCATGGTGGCCACTGGTCTaGGGCATGACTCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSWWPLV*GMTLPE
Trigger: CTCAGGGAGAGTCATGCCTCAGACCAGTGGCCACCA...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR CCA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATGGGAGGCGAAGGCTGTaGGGTAGGCAACCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHGRRRL*GRQPAR
Trigger: CCGGGCGGGTTGCCTACCCCACAGCCTTCGCCTCCC...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp GCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCCCGGTGGCCGAGTACTaGTCAAGGCAGACACCCCGG +
Preference number: 4 (lower is better)
Translates to: AKGSEEEAVLGGHSNTSLPVAEY*SRQTPR
Trigger: CCGGGGTGTCTGCCTTGATCAGTACTCGGCCACCGG...GAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp AGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGGTGGCGTGCTCGTaGCACCCTCCGTTAAGGCCG +
Preference number: 4 (lower is better)
Translates to: RVRGGSCTGWAQQHISHPQVACS*HPPLRP
Trigger: CGGCCTTAACGGAGGGTGTCACGAGCACGCCACCTG...TGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCACACTGGTCTGAGGCATaGCTCTCCCTGAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSHWSEA*LSLSTV
Trigger: CACAGTGCTCAGGGAGAGTCATGCCTCAGACCAGTG...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR TCA 90 bp CAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGTCTGCCATTGCAGGGTaGCCCCGCTCCACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QRKKSQRVRGGSCTGWAQSAIAG*PRSTWA
Trigger: TGCCCAGGTGGAGCGGGGTCACCCTGCAATGGCAGA...CTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCAGGGGAGCTGAGGTTGTaGTCTCATACAAGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSGELRL*SHTRGS
Trigger: CGAACCCCTTGTATGAGAGCACAACCTCAGCTCCCC...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR TCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCAAGGTTCTGGGGGAGCTaGGGTTGTGCTCTCATACAA +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSRFWGS*GCALIQ
Trigger: TTGTATGAGAGCACAACCTCAGCTCCCCCAGAACCT...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR TCA 90 bp CAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGTGGCCCAGGTGGCAGTaGGTGATGGCTGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: QRKKSQRVRGGSCTGWAQWPRWQ*VMAGIS
Trigger: GGAGATGCCAGCCATCACTCACTGCCACCTGGGCCA...CTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGGTCGTGGCAGCCGCCTaGACTGGGCAGCAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLVVAAA*TGQQAV
Trigger: AACTGCCTGCTGCCCAGTGCAGGCGGCTGCCACGAC...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCAGTTTCACAGAGGCACTaGCCGGAGCCCGTGATGCCA +
Preference number: 4 (lower is better)
Translates to: RVRGGSCTGWAQQHISHPVSQRH*PEPVMP
Trigger: TGGCATCACGGGCTCCGGGCAGTGCCTCTGTGAAAC...TGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCAGTGGCACAAAGAGGGTaGCGCGGATGGACAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RVRGGSCTGWAQQHISHPVAQRG*RGWTGQ
Trigger: CTGACCTGTCCATCCGCGGCACCCTCTTTGTGCCAC...TGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACATTGGCGAGGTGGTaGTCGATGTCCCGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: AKGSEEEAVLGGHSNTSLTLARW*SMSRPD
Trigger: GTCTGGGCGGGACATCGAGCACCACCTCGCCAATGT...GAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCATCCTCAAGGGGTCATTaGCCTCAAGCTGCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSSSRGH*PQAAVL
Trigger: AAGAACGGCAGCTTGAGGGCAATGACCCCTTGAGGA...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR GCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCAGTTTGTTTGTGCTGCTaGCTTGTGTTGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSVCLCC*LVLGGR
Trigger: CCTGCCTCCCAACACAAGGCAGCAGCACAAACAAAC...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR GCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCACGTGTTTGTTTGTGCTaGTGCCTTGTGTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSRVCLC*CLVLGG
Trigger: GCCTCCCAACACAAGGCAGCAGCACAAACAAACACG...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR GCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCAGGGCGTGTTTGTTTGTaGTGCTGCCTTGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSGRVCL*CCLVLG
Trigger: TCCCAACACAAGGCAGCAGCACAAACAAACACGCCC...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR GCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCATCATTGCCCTCAAGCTaGCGTTCTTCAGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSSLPSS*RSSESW
Trigger: CCAGGACTCTGAAGAACGGCAGCTTGAGGGCAATGA...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR CCA 90 bp AGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCAGCACTCTATACAGTCTaGGCCCCAGCGGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: RVRGGSCTGWAQQHISHPALYTV*APAART
Trigger: TGTCCTGGCCGCTGGGGCCCAGACTGTATAGAGTGC...TGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGGGGCAGGGCTGGCATTaGGGGCCAAAGAAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: GRMEQVPAEEYKGRRAKGGQGWH*GPKKPA
Trigger: TGCCGGCTTCTTTGGCCCCCAATGCCAGCCCTGCCC...CCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp ACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGGCAGTGAGTGATGGCTaGCATCTCCCGTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TGWAQQHISHPQKQPPDQAVSDG*HLPSRP
Trigger: GGGCCTGGACGGGAGATGCCAGCCATCACTCACTGC...CTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp GGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGTAGGGCCCACAGGCTaGGGTCTGCTTATCACAGAG +
Preference number: 4 (lower is better)
Translates to: GQRRKLYWVGTATHLSPTVGPTG*GLLITE
Trigger: CTCTGTGATAAGCAGACCTCAGCCTGTGGGCCCTAC...TGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CCATCATGTAGGGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAACGCAGGCTGTGCCGCTaGAGCCCTCCCCACACTCAC +
Preference number: 4 (lower is better)
Translates to: PSCRAEWSRCQLKSTKEERRLCR*SPPHTH
Trigger: GTGAGTGTGGGGAGGGCTTCAGCGGCACAGCCTGCG...TTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCCCTACATGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCAGCAGTTTCTTCATCGTaGAGGGGTCGTAGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSAVSSS*RGRRKV
Trigger: AACCTTCCTACGACCCCTTCACGATGAAGAAACTGC...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR GCA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGAAACTGCCTCTGCCATTaGAGGGTGACCCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LYWVGTATHLSPTETTPRNCLCH*RVTPLH
Trigger: GTGGAGCGGGGTCACCCTGCAATGGCAGAGGCAGTT...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCAGCACAACTGCCTCTaGCATTGCAGGGTGACCCCG +
Preference number: 4 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHQHNCL*HCRVTP
Trigger: CGGGGTCACCCTGCAATGGCAGAGGCAGTTGTGCTG...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACATCTTCACAGTGGCATTaGAGTACCGGGCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: GQRRKLYWVGTATHLSPTSSQWH*STGHSR
Trigger: GCGGCTGTGCCCGGTACTGCAATGCCACTGTGAAGA...TGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCGCCCGAAGTAGCCCTTaGAGCACCTGGGGATCTGTA +
Preference number: 4 (lower is better)
Translates to: AKGSEEEAVLGGHSNTSLARSSP*STWGSV
Trigger: TACAGATCCCCAGGTGCTGCAAGGGCTACTTCGGGC...GAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCAGAGATATTCTCAGGCTaGTGCTTGCCAAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSEIFSG*CLPRAA
Trigger: TGCAGCTCTTGGCAAGCAGCAGCCTGAGAATATCTC...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR GCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCATGTTTTAGTCTCTCCTaGTTGAAGCTGGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSCFSLS*LKLGGP
Trigger: TGGGCCACCCAGCTTCAAGCAGGAGAGACTAAAACA...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR CCA 90 bp CACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTGCTCAGGATGCGTTGTCGTaGCAGCCGCCTGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: HRNNPQISQRDEVWLLSAQDALS*QPPALG
Trigger: GCCCAGTGCAGGCGGCTGCCACGACAACGCATCCTG...AGCACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAATTCCCTGGGCAGGGCTaGCATTGGGGGCCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQFPGQG*HWGPKK
Trigger: CTTCTTTGGCCCCCAATGCCAGCCCTGCCCAGGGAA...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAAATTCTGGGCATTCCCTaGGCAGGGCTGGCATTGGGG +
Preference number: 4 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQILGIP*AGLALG
Trigger: CCCCAATGCCAGCCCTGCCCAGGGAATGCCCAGAAT...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGTCAGCAGGTAGGGCATaGAGGGCTTGGTCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLSAGRA*RAWSVG
Trigger: GCCCACCGACCAAGCCCTCCATGCCCTACCTGCTGA...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCCAGCCCACTGTTCTGTaGCACAAAGAGGGTGCCGCG +
Preference number: 4 (lower is better)
Translates to: KSQRVRGGSCTGWAQQHIQPTVL*HKEGAA
Trigger: CGCGGCACCCTCTTTGTGCCACAGAACAGTGGGCTG...GATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATGGTTGGAGTGGGTCCTaGCTGGCAGTGATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHGWSGS*LAVMSS
Trigger: GCTGCTCATCACTGCCAGCCAGGACCCACTCCAACC...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACTCCGTCGGTTGGAGTaGGTCCTGGCTGGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQLRRLE*VLAGSD
Trigger: ATCACTGCCAGCCAGGACCCACTCCAACCGACGGAG...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGGCTCCCAAGCCAGTGTaGGTCAAGGTCACGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GRMEQVPAEEYKGRRAKGAPKPV*VKVTGA
Trigger: TGCCCCCGTGACCTTGACCCACACTGGCTTGGGAGC...CCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp GGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGGATCAGAGCAGAACTaGCACTGGGAGCCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: GQRRKLYWVGTATHLSPTGSEQN*HWEPWK
Trigger: CTTCCAAGGCTCCCAGTGTCAGTTCTGCTCTGATCC...TGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp AGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTCTGCATGTGCCAGTaGGGCAGGCCCCATCGCTGT +
Preference number: 4 (lower is better)
Translates to: RCQLKSTKEEEPKGQRRKLCMCQ*GRPHRC
Trigger: ACAGCGATGGGGCCTGCCTCACTGGCACATGCAGAG...CTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCAAAAGGCAACTGGTGCTaGGAATTCACAGTTGATGGC +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSKGNWC*EFTVDG
Trigger: GCCATCAACTGTGAATTCTCAGCACCAGTTGCCTTT...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR TCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCAGTGTTGAGTCCTAGTTaGATCTTTCTGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSVLSPS*IFLVAT
Trigger: AGTGGCCACCAGAAAGATTCAACTAGGACTCAACAC...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR GCA 90 bp GGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAAAATGCATGTCCCGTTaGCGCCGAGGCTATCTGCAC +
Preference number: 4 (lower is better)
Translates to: GQRRKLYWVGTATHLSPTKCMSR*RRGYLH
Trigger: GTGCAGATAGCCTCGGCGGCAACGGGACATGCATTT...TGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAACGTACTTGCCCTCGGTaGAGGTCTCGCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEERTCPR*RSRRLC
Trigger: GCACAGCCTGCGAGACCTGCACCGAGGGCAAGTACG...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGTCTGTATCACCAGGCTaGACCGCTCCCGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRSVSPG*TAPGSL
Trigger: AAGGCTGCCGGGAGCGGTGCAGCCTGGTGATACAGA...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACACACTGCAGGCAAAACTaGCTGAGTGTCACACGAGGG +
Preference number: 4 (lower is better)
Translates to: GQRRKLYWVGTATHLSPTHCRQN*LSVTRG
Trigger: CCCTCGTGTGACACTCAGGCAGTTTTGCCTGCAGTG...TGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGGCATCTGGCCACCTTTaGACAGCCCCCGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: EYKGRRAKGSEEEAVLGGASGHL*TAPVVL
Trigger: CAGGACAACGGGGGCTGTGCAAAGGTGGCCAGATGC...CCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAATGCAGGAGACCTTCGTaGCCTTCTGGGAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQCRRPS*PSGSIW
Trigger: CCAGATGCTCCCAGAAGGGCACGAAGGTCTCCTGCA...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGACGGTCAATGGGCAGCTaGTCCGGCTCACAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: AQQHISHPQKQPPDQPERRSMGS*SGSQFS
Trigger: GCTGAACTGTGAGCCGGAGCAGCTGCCCATTGACCG...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCAATATTCTCAGGCTGCTaGTTGCCAAGAGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSIFSGC*LPRAAT
Trigger: TGTTGCAGCTCTTGGCAAGCAGCAGCCTGAGAATAT...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR CCA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACCAAAGCAGACATTCTaGGCATTCCCTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQPKQTF*AFPGQG
Trigger: GCCCTGCCCAGGGAATGCCCAGAATGTCTGCTTTGG...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGTGGCAGGCGACCACATaGTACCGAAGAACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EYKGRRAKGSEEEAVLGGWQATT*YRRTWG
Trigger: GCCCCAGGTTCTTCGGTACCATGTGGTCGCCTGCCA...CCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGAATTACACGGGGCATCTaGTCCTCCAGGGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AQQHISHPQKQPPDQPERITRGI*SSRAGL
Trigger: CAGGCCTGCCCTGGAGGACCAGATGCCCCGTGTAAT...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGCTGACATTGGCGAGGTaGTGCTCGATGTCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLLTLAR*CSMSRP
Trigger: TGGGCGGGACATCGAGCACCACCTCGCCAATGTCAG...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp ACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGAAGGCACGAGGACAGTaGGGTTTGAGGTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: TGWAQQHISHPQKQPPDQKARGQ*GLRWLT
Trigger: TGTCAGCCACCTCAAACCTCACTGTCCTCGTGCCTT...CTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp AAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTGTTCCAGCCGCATaGGCAGGTTTGGTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: KSQRVRGGSCTGWAQQHISVPAA*AGLVRS
Trigger: GCTCCTTACCAAACCTGCTCATGCGGCTGGAACAGA...GATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCTCCTCCAGGACCACATaGTACCGGAGGACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QGRKITVTHHVGQNGAGASSRTT*YRRTSS
Trigger: GGAGGACGTCCTCCGGTATCATGTGGTCCTGGAGGA...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCGGCAGCTGGGAGTATTaGCACAGCTCCCACACTCCC +
Preference number: 4 (lower is better)
Translates to: QGRKITVTHHVGQNGAGAGSWEY*HSSHTP
Trigger: GGGAGTGTGGGAGCTGTGTCAATACTCCCAGCTGCC...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCGCAGGCAAAACTGCCTaGGTGTCACACGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: QGRKITVTHHVGQNGAGAAGKTA*VSHEGP
Trigger: AGGCCCCTCGTGTGACACTCAGGCAGTTTTGCCTGC...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTCTCCAGCCAGCCTGCTaGGCACAGGTGGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGALQPAC*AQVVLG
Trigger: GCCAAGTACCACCTGTGCTCAGCAGGCTGGCTGGAG...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCAGGGCATTCTGTGTGTTaGGTCCTAGTTGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSGHSVC*VLVESF
Trigger: GAAAGATTCAACTAGGACTCAACACACAGAATGCCC...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR GCA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGAAGCCCTCCTCACAAATaGATGTCCCGTTGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: AQQHISHPQKQPPDQPERSPPHK*MSRCRR
Trigger: TCGGCGGCAACGGGACATGCATTTGTGAGGAGGGCT...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAAGCCTGCTTTGCACGTaGACACTCGCCTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEESLLCT*TLAFLG
Trigger: CCCCAGGAAGGCGAGTGTGCACGTGCAAAGCAGGCT...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCTCAGCTCTGAACCTTaGAGGGTCTTCCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QRKKSQRVRGGSCTGWAQLSSEP*RVFQAV
Trigger: CACTGCCTGGAAGACCCTGCAAGGTTCAGAGCTGAG...CTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGGGTCACCGATGTCCCTaGCAGCTCCACATTTCACAC +
Preference number: 4 (lower is better)
Translates to: QRKKSQRVRGGSCTGWAQGHRCP*QLHISH
Trigger: GTGTGAAATGTGGAGCTGGCAGGGACATCGGTGACC...CTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAATCAGCAGACAGTCAATaGCGTAGGCCACACCCAGGT +
Preference number: 4 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQSADSQ*RRPHPG
Trigger: ACCTGGGTGTGGCCTACGGCATTGACTGTCTGCTGA...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAAAGGACATCAGGACCTaGAGCAGGTTCCCACTGCAT +
Preference number: 4 (lower is better)
Translates to: GQRRKLYWVGTATHLSPTKDIRT*SRFPLH
Trigger: ATGCAGTGGGAACCTGCTGCAGGTCCTGATGTCCTT...TGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGGGGGAGCTGAGGTTGTaGTCTCATACAAGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: QRKKSQRVRGGSCTGWAQGELRL*SHTRGS
Trigger: CGAACCCCTTGTATGAGAGCACAACCTCAGCTCCCC...CTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTTTTCCAGAAGCAGCTaGTGGCAGGCGACCACATGG +
Preference number: 4 (lower is better)
Translates to: KSQRVRGGSCTGWAQQHIFSRSS*WQATTW
Trigger: CCATGTGGTCGCCTGCCACCAGCTGCTTCTGGAAAA...GATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp ACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTAGGGCATGGAGGGCTTaGTCGGTGGGCCAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: THRNNPQISQRDEVWLLSRAWRA*SVGQKR
Trigger: TCTCTTCTGGCCCACCGACCAAGCCCTCCATGCCCT...ACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGCCCTTGCAGCACCTaGGGATCTGTATCACCAGGC +
Preference number: 4 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLSPCST*GSVSPG
Trigger: GCCTGGTGATACAGATCCCCAGGTGCTGCAAGGGCT...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp ACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTCCTTCTGGGAGCATCTaGCCACCTTTGCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: THRNNPQISQRDEVWLLSPSGSI*PPLHSP
Trigger: GGGGCTGTGCAAAGGTGGCCAGATGCTCCCAGAAGG...ACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGAACCTTCGTGCCCTTCTaGGAGCATCTGGCCACCTTT +
Preference number: 4 (lower is better)
Translates to: LYWVGTATHLSPTETTPRTFVPF*EHLATF
Trigger: AAAGGTGGCCAGATGCTCCCAGAAGGGCACGAAGGT...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGCCTGCTGAGCACAGGTaGTACTTGGCCTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRPAEHR*YLAFWA
Trigger: TGCCCAGAAGGCCAAGTACCACCTGTGCTCAGCAGG...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CCATCATGTAGGGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAACTGGTCTCCGTCGGTTaGAGTGGGTCCTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PSCRAEWSRCQLKSTKEELVSVG*SGSWLA
Trigger: TGCCAGCCAGGACCCACTCCAACCGACGGAGACCAG...TTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCCCTACATGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGAGACACATCTGTGTGTaGAGAGTGCTGTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QRKKSQRVRGGSCTGWAQRHICV*RVLWAQ
Trigger: CTGAGCCCACAGCACTCTTCACACACAGATGTGTCT...CTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCAGCAGGCAGTTGTTaGTCTCCGAGCAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEEAAGSC*SPSSLS
Trigger: GGAGAGACTGCTCGGAGATCAACAACTGCCTGCTGC...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGTGGGCAGGTCAGCTCTaGGGAGCATGTCCTACATCT +
Preference number: 4 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRWAGQL*GACPTS
Trigger: AGATGTAGGACATGCTCCTCAGAGCTGACCTGCCCA...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCTGGGCCAGAAGAGAGTaGCTGGGGTGTGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: QGRKITVTHHVGQNGAGAWARRE*LGCGWD
Trigger: ATCCCATCCACACCCCAGTCACTCTCTTCTGGCCCA...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp ACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCTTCCAGGTTCCTCTTaGAGGGCAGGTTGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: TGWAQQHISHPQKQPPDQLPGSS*RAGCRD
Trigger: GTCTCTACAACCTGCCCTTCAAGAGGAACCTGGAAG...CTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp GCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCGGCCTGGAAATGACATaGATGATCCCATTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: AKGSEEEAVLGGHSNTSLGLEMT*MIPLEA
Trigger: TGCCTCCAATGGGATCATTCATGTCATTTCCAGGCC...GAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp ACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGGGAGCAGGTGCCAGCTaGAGAGTACAAAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: TGWAQQHISHPQKQPPDQGAGAS*RVQRKK
Trigger: CTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCC...CTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGCACATACAAACAGGATaGGTTGTCGTGGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRHIQTG*VVVAAA
Trigger: GGCGGCTGCCACGACAACGCATCCTGTTTGTATGTG...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTTGGTCACAGTGGATaGCGTACTTGCCCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: RCQLKSTKEEEPKGQRRKLGHSG*RTCPRC
Trigger: GCACCGAGGGCAAGTACGGCATCCACTGTGACCAAG...CTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGACCAAGGGTCCTTGGTTaGATCTCCCATGGACACAAG +
Preference number: 4 (lower is better)
Translates to: LYWVGTATHLSPTETTPRPRVLG*ISHGHK
Trigger: CTTGTGTCCATGGGAGATGCAACCAAGGACCCTTGG...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTGCTCCGTGTAGCCTGCTTTaGACGTGCACACTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: HRNNPQISQRDEVWLLSAPCSLL*TCTLAF
Trigger: GAAGGCGAGTGTGCACGTGCAAAGCAGGCTACACGG...AGCACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGAAGGAGGCGTACACACTaGAGGCAAAACTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: LYWVGTATHLSPTETTPRRRRTH*RQNCLS
Trigger: ACTCAGGCAGTTTTGCCTGCAGTGTGTACGCCTCCT...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCATCCCTTCTGGCAGCTaGAGGAGACCTTCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: QGRKITVTHHVGQNGAGAIPSGS*RRPSCP
Trigger: AGGGCACGAAGGTCTCCTGCAGCTGCCAGAAGGGAT...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGATCTCTGTGCAGCTGTaGCCGTCCCCTTTGTATCCC +
Preference number: 4 (lower is better)
Translates to: EYKGRRAKGSEEEAVLGGISVQL*PSPLYP
Trigger: GGGATACAAAGGGGACGGGCACAGCTGCACAGAGAT...CCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAAGGGGTCTATCTCTGTaGAGCTGTGCCCGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEERGLSL*SCARPL
Trigger: AAGGGGACGGGCACAGCTGCACAGAGATAGACCCCT...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGAGAGCTGGTTGTAGGTTaGCATGGTCGCAGCTTCGTT +
Preference number: 4 (lower is better)
Translates to: LYWVGTATHLSPTETTPRELVVG*HGRSFV
Trigger: AACGAAGCTGCGACCATGGCAACCTACAACCAGCTC...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGCTTCCCAGCCTCGTTTaGAGGGTGGTGCCATTGACA +
Preference number: 4 (lower is better)
Translates to: GRMEQVPAEEYKGRRAKGLPSLV*RVVPLT
Trigger: TGTCAATGGCACCACCCTGCAAACGAGGCTGGGAAG...CCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAATCCTCAAGGGGTCATTaGCCTCAAGCTGCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQSSRGH*PQAAVL
Trigger: AAGAACGGCAGCTTGAGGGCAATGACCCCTTGAGGA...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGACATGCTTGGTCACAGTaGATGCCGTACTTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: AQQHISHPQKQPPDQPERHAWSQ*MPYLPS
Trigger: CGAGGGCAAGTACGGCATCCACTGTGACCAAGCATG...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCAGTTGGCGCTGGTATaGCATGTCCCATTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHQLALV*HVPLQL
Trigger: CAACTGCAATGGGACATGCCATACCAGCGCCAACTG...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGAGCACACTCGCCTTCCTaGGGTGGTTCTCTTACAGTC +
Preference number: 4 (lower is better)
Translates to: AQQHISHPQKQPPDQPERAHSPS*GGSLTV
Trigger: GACTGTAAGAGAACCACCCCAGGAAGGCGAGTGTGC...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGTACAGGCAGCCTGGTTaGGTCCTGTCTGTGTGCACT +
Preference number: 4 (lower is better)
Translates to: EYKGRRAKGSEEEAVLGGYRQPG*VLSVCT
Trigger: AGTGCACACAGACAGGACCCAACCAGGCTGCCTGTA...CCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGCAGTTACAGGCAGCCTaGTTGGGTCCTGTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRQLQAA*LGPVCV
Trigger: CACACAGACAGGACCCAACCAGGCTGCCTGTAACTG...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGAACAGTGAAGGGGCCTaGGCCGACCAGATCTTTCAC +
Preference number: 4 (lower is better)
Translates to: GRMEQVPAEEYKGRRAKGNSEGA*ADQIFH
Trigger: GTGAAAGATCTGGTCGGCCCAGGCCCCTTCACTGTT...CCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATAGAGTGACTGGGGTGTaGATGGGATCGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHRVTGV*MGSVMT
Trigger: TGTCATCACCGATCCCATCCACACCCCAGTCACTCT...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGACTGTCATCTTACAGGTaGCGTGCTCGTGACACCCTC +
Preference number: 4 (lower is better)
Translates to: AQQHISHPQKQPPDQPERLSSYR*RARDTL
Trigger: GAGGGTGTCACGAGCACGCCACCTGTAAGATGACAG...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTGCTGGAGGTCGACACATTTaGCGTCTGCATGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: HRNNPQISQRDEVWLLSAGGRHI*RLHGTA
Trigger: GGCAGTGCCATGCAGACGCCAAATGTGTCGACCTCC...AGCACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCCCAACAGTGGTATCCTaGAAGTGGAGGTCGACACAT +
Preference number: 4 (lower is better)
Translates to: AKGSEEEAVLGGHSNTSLPTVVS*KWRSTH
Trigger: ATGTGTCGACCTCCACTTCCAGGATACCACTGTTGG...GAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp ACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGGGAACACCCCAACAGTaGTATCCTGGAAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TGWAQQHISHPQKQPPDQGTPQQ*YPGSGG
Trigger: ACCTCCACTTCCAGGATACCACTGTTGGGGTGTTCC...CTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAAAGCACAGGTGGTACTTaGCCTTCTGGGCATAGGAGA +
Preference number: 4 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQSTGGT*PSGHRR
Trigger: TCTCCTATGCCCAGAAGGCCAAGTACCACCTGTGCT...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCATGTAGGGCAGAATaGAGCAGGTGCCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LYWVGTATHLSPTETTPRSCRAE*SRCQLK
Trigger: CTTCAGCTGGCACCTGCTCCATTCTGCCCTACATGA...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCTGCCCGTGCCAGTTTTaGTGCATTCTGCATTGCGGC +
Preference number: 4 (lower is better)
Translates to: QGRKITVTHHVGQNGAGACPCQF*CILHCG
Trigger: GCCGCAATGCAGAATGCATCAAAACTGGCACGGGCA...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp AAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCCAGCTTGCCAATGGATaGCATTTCCCGGTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: KSQRVRGGSCTGWAQQHIQLANG*HFPVCS
Trigger: GGAACAAACCGGGAAATGTCATCCATTGGCAAGCTG...GATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp GAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGTCCTTACAGGTGGCATaGGCAGAACAAGGAGGCGTA +
Preference number: 4 (lower is better)
Translates to: EYKGRRAKGSEEEAVLGGSLQVA*AEQGGV
Trigger: TACGCCTCCTTGTTCTGCTCATGCCACCTGTAAGGA...CCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGACAGGTTCCCACTGCATaGGAAGCCATCTCCCACATA +
Preference number: 4 (lower is better)
Translates to: AQQHISHPQKQPPDQPERQVPTA*EAISHI
Trigger: TATGTGGGAGATGGCTTCTCATGCAGTGGGAACCTG...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGGTTCTTCAGAGTCCGTaGAGGGGTCGTAGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLVLQSP*RGRRKV
Trigger: AACCTTCCTACGACCCCTTCACGGACTCTGAAGAAC...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATGGCATGTACAACTGTaGCGATTTGGTCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LYWVGTATHLSPTETTPRWHVQL*RFGPRY
Trigger: GTACCTGGGACCAAATCGGCACAGTTGTACATGCCA...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTGGAGTTAGTCCTGTaGAAGGGTCCATCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHLELVL*KGPSQN
Trigger: GTTCTGAGATGGACCCTTGCACAGGACTAACTCCAG...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGAGTTGCATTGTCACAATaGACTCCTCGCCAGCCAACA +
Preference number: 4 (lower is better)
Translates to: LYWVGTATHLSPTETTPRVALSQ*TPRQPT
Trigger: TGTTGGCTGGCGAGGAGTGCATTGTGACAATGCAAC...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp ACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTGGCAAAGAAGATCCCTaGTCCCAAGCCAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: THRNNPQISQRDEVWLLSGKEDP*SQASVG
Trigger: ACCCACACTGGCTTGGGAGCAGGGATCTTCTTTGCC...ACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGTCCTTCCTACAAATATaGCGGCATCCGGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLSFLQI*RHPGRD
Trigger: GTCTCTCCCCGGATGCCGCCATATTTGTAGGAAGGA...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTGCTTGGGCTTGTCACACTTaGGGCCAGTGTACGCAGAGT +
Preference number: 4 (lower is better)
Translates to: HRNNPQISQRDEVWLLSAWACHT*GQCTQS
Trigger: ACTCTGCGTACACTGGCCCCAAGTGTGACAAGCCCA...AGCACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCCATCGCCTCGGTAATTaGGAAGGCATTTGCATTCCA +
Preference number: 4 (lower is better)
Translates to: AKGSEEEAVLGGHSNTSLHRLGN*EGICIP
Trigger: TGGAATGCAAATGCCTTCCCAATTACCGAGGCGATG...GAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCATTCAGTTCGGCCTaGTGCGACGGTGGTGCAATT +
Preference number: 4 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEEAFSSA*CDGGAI
Trigger: AATTGCACCACCGTCGCACCAGGCCGAACTGAATGC...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCCTTCCGAGATCCCTCTaGAGAAAGGAGGTAATCGAG +
Preference number: 4 (lower is better)
Translates to: KSQRVRGGSCTGWAQQHILPRSL*RKEVIE
Trigger: CTCGATTACCTCCTTTCTCCAGAGGGATCTCGGAAG...GATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATGTATCACTCCATTTGTaGCTGCGTTGTCCCCATCGA +
Preference number: 4 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHVSLHL*LRCPHR
Trigger: TCGATGGGGACAACGCAGCCACAAATGGAGTGATAC...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACACAAGAACATGCTTaGTCACAGTGGATGCCGTAC +
Preference number: 4 (lower is better)
Translates to: AKGSEEEAVLGGHSNTSLTQEHA*SQWMPY
Trigger: GTACGGCATCCACTGTGACCAAGCATGTTCTTGTGT...GAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGTCTCCCAAGGGTCCTTaGTTGCATCTCCCATGGACA +
Preference number: 4 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLSPKGP*LHLPWT
Trigger: TGTCCATGGGAGATGCAACCAAGGACCCTTGGGAGA...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTTCCAGAAGCAGCTGGTaGCAGGCGACCACATGGTAC +
Preference number: 4 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGASRSSW*QATTWY
Trigger: GTACCATGTGGTCGCCTGCCACCAGCTGCTTCTGGA...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGGTGGTATCCTGGAAGTaGAGGTCGACACATTTGGCG +
Preference number: 4 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLVVSWK*RSTHLA
Trigger: CGCCAAATGTGTCGACCTCCACTTCCAGGATACCAC...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCTGTCCCACTGCAGAATaGCTCTTCCATCAACAAACC +
Preference number: 4 (lower is better)
Translates to: AKGSEEEAVLGGHSNTSLCPTAE*LFHQQT
Trigger: GGTTTGTTGATGGAAGAGCCATTCTGCAGTGGGACA...GAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTCACTGGGCTAGGGGCTaGGATACAAAGACGGAGGCT +
Preference number: 4 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGAHWARG*DTKTEA
Trigger: AGCCTCCGTCTTTGTATCCCAGCCCCTAGCCCAGTG...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTTGTGAGGGGTGGAGATaGGAGTGGCCACTTCAAGCT +
Preference number: 4 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGACEGWR*EWPLQA
Trigger: AGCTTGAAGTGGCCACTCTCATCTCCACCCCTCACA...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGAGGGTTCGTCTTCCCATaGAATAGGAGGTATAGATGC +
Preference number: 4 (lower is better)
Translates to: LYWVGTATHLSPTETTPRGFVFP*NRRYRC
Trigger: GCATCTATACCTCCTATTTCATGGGAAGACGAACCC...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp ACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTTACCATCTGAGTTGGTaGGGCAGTTGGCGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: THRNNPQISQRDEVWLLSYHLSW*GSWRWY
Trigger: ATACCAGCGCCAACTGCCTCACCAACTCAGATGGTA...ACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGACTGCCCGGAGCCCGTaGTGCCATCATCGCACTGTC +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGTARSP*CHHRTV
Trigger: GACAGTGCGATGATGGCATCACGGGCTCCGGGCAGT...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGATCAGCCAGAGAGATaGGGTATGGCTTCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEEDQPER*GMASEC
Trigger: GCACTCAGAAGCCATACCTCATCTCTCTGGCTGATC...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGACCTATCACATCTTCTTaGCTGCCCTGTGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: AQQHISHPQKQPPDQPERPITSS*LPCGFS
Trigger: GCTGAAACCACAGGGCAGGCAAGAAGATGTGATAGG...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp ACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCTGCCTTCAGCACAACTaGCTCTGCCATTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TGKKDHSYPSCRAEWSRCCLQHN*LCHCRV
Trigger: CACCCTGCAATGGCAGAGGCAGTTGTGCTGAAGGCA...GCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCCCCCATGCACACAGTTaGACACTGATGAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: QGRKITVTHHVGQNGAGAPHAHS*TLMNSW
Trigger: CCAGCTGTTCATCAGTGTGCAACTGTGTGCATGGGG...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAATGGGGTCGCAGTATTTaGCATCGCCTCGGTAATTGG +
Preference number: 4 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEEWGRSI*HRLGNW
Trigger: CCAATTACCGAGGCGATGGCAAATACTGCGACCCCA...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGCTGGTGCGACGGTGGTaGAATTTGCATTCCTATGAC +
Preference number: 4 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLLVRRW*NLHSYD
Trigger: GTCATAGGAATGCAAATTGCACCACCGTCGCACCAG...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATAACCTTTCTGGCAAATaGATTCAGTTCGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHNLSGK*IQFGLV
Trigger: CACCAGGCCGAACTGAATGCATTTGCCAGAAAGGTT...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGGCTCTGTCAAGGATGTaGAGAAGCCCATTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRALSRM*RSPLEA
Trigger: TGCTTCCAATGGGCTTCTGCACATCCTTGACAGAGC...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp ACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCCACAGGCTGAGGTCTaGTTATCACAGAGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: TGKKDHSYPSCRAEWSRCPQAEV*LSQSLP
Trigger: CGGGAGACTCTGTGATAAGCAGACCTCAGCCTGTGG...GCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGAACTGGCTGTCCCATTaGTGTATTCACAGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: EYKGRRAKGSEEEAVLGGNWLSH*CIHRWR
Trigger: ACGCCACCTGTGAATACAGCAATGGGACAGCCAGTT...CCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATAGTTTTGATGCATTCTaGATTGCGGCTACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHSFDAF*IAATAS
Trigger: GGAGGCTGTAGCCGCAATGCAGAATGCATCAAAACT...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp ACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGATTCCCATCCACCTTTaGCAAGTGAAGGAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: TGWAQQHISHPQKQPPDQIPIHL*QVKEVA
Trigger: GGCAACTTCCTTCACTTGGCAAAGGTGGATGGGAAT...CTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCACTCACACACACCTGTaGCATTCACTCCATCCAAAC +
Preference number: 4 (lower is better)
Translates to: KSQRVRGGSCTGWAQQHITHTHL*HSLHPN
Trigger: GTTTGGATGGAGTGAATGGCACAGGTGTGTGTGAGT...GATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GGTATGGCTTCTGAGTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCAGTGGATGCCGTACTTaGCCTCGGTGCAGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: GMASECLKDFTFLKGNWCSGCRT*PRCRSR
Trigger: GCGAGACCTGCACCGAGGGCAAGTACGGCATCCACT...GCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp ACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGTCCATCTCCAGTGTATaGTGGCAAACAGTTACAGGC +
Preference number: 4 (lower is better)
Translates to: TGWAQQHISHPQKQPPDQSISSV*WQTVTG
Trigger: GCCTGTAACTGTTTGCCAGCATACACTGGAGATGGA...CTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCCAAGTCCTTTCTACTTaGCCAGTGTGGTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: KSQRVRGGSCTGWAQQHIQVLST*PVWLQM
Trigger: CATCTGCAACCACACTGGGCAAGTAGAAAGGACTTG...GATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGACCCGCTGCACAATTCTaGAGGTTTGGCCATTCAGAA +
Preference number: 4 (lower is better)
Translates to: AQQHISHPQKQPPDQPERPAAQF*RFGHSE
Trigger: TTCTGAATGGCCAAACCTGCAGAATTGTGCAGCGGG...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGCCCCGTTGTCCTGTTTaGAGAAATCCACAACTGTGC +
Preference number: 4 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRPRCPV*RNPQLC
Trigger: GCACAGTTGTGGATTTCTGCAAACAGGACAACGGGG...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGTTACACTCACACTTGTaGTTGCCCGGGCCTGTCATC +
Preference number: 4 (lower is better)
Translates to: RCQLKSTKEEEPKGQRRKLHSHL*LPGPVI
Trigger: GATGACAGGCCCGGGCAAGCACAAGTGTGAGTGTAA...CTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CCATCATGTAGGGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGCGTCTGCATGGCACTaGCCATTGTCCTGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: PSCRAEWSRCQLKSTKEEASAWH*PLSCKQ
Trigger: CTGCTTACAGGACAATGGGCAGTGCCATGCAGACGC...TTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCCCTACATGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCGACACATTTGGCGTCTaGATGGCACTGCCCATTGTC +
Preference number: 4 (lower is better)
Translates to: QGRKITVTHHVGQNGAGADTFGV*MALPIV
Trigger: GACAATGGGCAGTGCCATGCAGACGCCAAATGTGTC...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAGCCCACCTTGCAGGTaGAGTTCACATCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRSPPCR*SSHLSS
Trigger: GGATGAAAGATGTGAACTGCACCTGCAAGGTGGGCT...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCCACATAGCCCACCTTaGAGGTGCAGTTCACATCTT +
Preference number: 4 (lower is better)
Translates to: EYKGRRAKGSEEEAVLGGPHSPP*RCSSHL
Trigger: AAGATGTGAACTGCACCTGCAAGGTGGGCTATGTGG...CCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATATATTCTCAGGCTGCTaGTTGCCAAGAGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHIFSGC*LPRAAT
Trigger: TGTTGCAGCTCTTGGCAAGCAGCAGCCTGAGAATAT...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATTGGAATCTTCACAGTaGCATTGCAGTACCGGGCAC +
Preference number: 4 (lower is better)
Translates to: AQQHISHPQKQPPDQPERLESSQ*HCSTGH
Trigger: GTGCCCGGTACTGCAATGCCACTGTGAAGATTCCAA...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCAGCCTTTGCAGCACTTTaGAATCTTCACAGTGGCATT +
Preference number: 4 (lower is better)
Translates to: RVRGGSCTGWAQQHISHPAFAAL*NLHSGI
Trigger: AATGCCACTGTGAAGATTCCAAAGTGCTGCAAAGGC...TGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGTCCTCAGTAGCTTGTTaGGAAGGCACGAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: RCQLKSTKEEEPKGQRRKSSVAC*EGTRTV
Trigger: CACTGTCCTCGTGCCTTCCCAACAAGCTACTGAGGA...CTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAGGAGAAACCCAGCATaGTCTCACGATGCATGCCAT +
Preference number: 4 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRRRNPA*SHDACH
Trigger: ATGGCATGCATCGTGAGACCATGCTGGGTTTCTCCT...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAATGGTTGCATCTCCCATaGACACAAGAACATGCTTGG +
Preference number: 4 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQWLHLP*TQEHAW
Trigger: CCAAGCATGTTCTTGTGTCCATGGGAGATGCAACCA...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp ACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCTCGCCTTCCTGGGGTaGTTCTCTTACAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: TGKKDHSYPSCRAEWSRCLAFLG*FSYSQP
Trigger: AGGCTGACTGTAAGAGAACCACCCCAGGAAGGCGAG...GCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGCAGTGTGGTTGCAGATaGCAAATTCACTACAGCCGC +
Preference number: 4 (lower is better)
Translates to: GRMEQVPAEEYKGRRAKGQCGCR*QIHYSR
Trigger: GCGGCTGTAGTGAATTTGCCATCTGCAACCACACTG...CCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CCATCATGTAGGGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGGGTCTTCCAGGCAGTaGATGTGGGAAGATCCACAG +
Preference number: 4 (lower is better)
Translates to: PSCRAEWSRCQLKSTKEEGSSRQ*MWEDPQ
Trigger: CTGTGGATCTTCCCACATCCACTGCCTGGAAGACCC...TTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCCCTACATGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATGTTCTCCTTACAGGTaGCATGAGCAGAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: LYWVGTATHLSPTETTPRCSPYR*HEQNKE
Trigger: CTCCTTGTTCTGCTCATGCCACCTGTAAGGAGAACA...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCAGTGGGGAGCGTAGATaGAACACCCCAACAGTGGTA +
Preference number: 4 (lower is better)
Translates to: QGRKITVTHHVGQNGAGASGERR*NTPTVV
Trigger: TACCACTGTTGGGGTGTTCCATCTACGCTCCCCACT...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp ACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTTGGCACAGGCCTCTCTaGCTTTGTCAAAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: THRNNPQISQRDEVWLLSWHRPL*LCQRSA
Trigger: AGCTGACCTTTGACAAAGCCAGAGAGGCCTGTGCCA...ACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CCATCATGTAGGGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGGTTGTAGGTTGCCATaGTCGCAGCTTCGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: PSCRAEWSRCQLKSTKEEGCRLP*SQLRWH
Trigger: GTGCCAACGAAGCTGCGACCATGGCAACCTACAACC...TTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCCCTACATGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGTCCGACTCAAAATGCTaGAAGCCGATTGTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLSDSKC*KPIVLR
Trigger: CCGGAGAACAATCGGCTTCCAGCATTTTGAGTCGGA...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCGGAAGCTGTACTGGGTaGGCACAGCAACACATCTCT +
Preference number: 4 (lower is better)
Translates to: QGRKITVTHHVGQNGAGAGSCTG*AQQHIS
Trigger: AGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCC...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGTGTCCTTATCGCTGTTaGAGATTTCCCCCGACTTTC +
Preference number: 4 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRCPYRC*RFPPTF
Trigger: GAAAGTCGGGGGAAATCTTCAACAGCGATAAGGACA...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp GCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCCCTCTAACAAAGATCTaGACTTGCTGTACCTTGGTT +
Preference number: 4 (lower is better)
Translates to: AKGSEEEAVLGGHSNTSLPLTKI*TCCTLV
Trigger: AACCAAGGTACAGCAAGTTCAGATCTTTGTTAGAGG...GAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCGGACAATGTGGTATCTaGCGAGTTCCAGAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QGRKITVTHHVGQNGAGAGQCGI*RVPEAS
Trigger: GGAAGCTTCTGGAACTCGTCAGATACCACATTGTCC...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp GTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGAGAATTCACAGTCCTGTCCAACCCTGCTaGCACACGCAGGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VLKGLYVPKRQLVLRIHSPVQPC*HTQVWV
Trigger: CACCCACACCTGCGTGTGTCAGCAGGGTTGGACAGG...ACTGTGAATTCTCAGCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGTGCTTCGGAGAGAAATaGCAATTCCACTGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLCFGEK*QFHCCV
Trigger: AACGCAGCAGTGGAATTGTCATTTCTCTCCGAAGCA...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCCTCAAAGGTGTACCTaGAATCTCGAACCCCTACAG +
Preference number: 4 (lower is better)
Translates to: RCQLKSTKEEEPKGQRRKPQRCT*NLEPLQ
Trigger: CTGTAGGGGTTCGAGATTGCAGGTACACCTTTGAGG...CTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATATATATCAGTCATACTaGACCCCACTCCAGGTACGA +
Preference number: 4 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHIYQSY*TPLQVR
Trigger: TCGTACCTGGAGTGGGGTGCAGTATGACTGATATAT...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGAACAGCTCACACAAGTaGCCAGTTTCATCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: QRKKSQRVRGGSCTGWAQNSSHK*PVSSLS
Trigger: AGAGAGAGATGAAACTGGGCACTTGTGTGAGCTGTT...CTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CCATCATGTAGGGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAACTCCTGGACACTGGTTaGAGTCAGGTCCATAGAAGC +
Preference number: 4 (lower is better)
Translates to: PSCRAEWSRCQLKSTKEELLDTG*SQVHRS
Trigger: GCTTCTATGGACCTGACTGCAACCAGTGTCCAGGAG...TTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCCCTACATGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTTAGGGCTGGAATATTaGTCTGTGACAACCAGAAGC +
Preference number: 4 (lower is better)
Translates to: KSQRVRGGSCTGWAQQHILGLEY*SVTTRS
Trigger: GCTTCTGGTTGTCACAGAGCAATATTCCAGCCCTAA...GATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTGCCACTCTGTATGTaGCTAGTAGCATATGGTACT +
Preference number: 4 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHLPLCM*LVAYGT
Trigger: AGTACCATATGCTACTAGGCACATACAGAGTGGCAG...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAACACTCCATTTGTGGCTaGGTTGTCCCCATCGACAAT +
Preference number: 4 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEEHSICG*VVPIDN
Trigger: ATTGTCGATGGGGACAACGCAGCCACAAATGGAGTG...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGGTCTCACGATGCATaGCATTGTGCAGGTCATTCT +
Preference number: 4 (lower is better)
Translates to: AQQHISHPQKQPPDQPERWSHDA*HCAGHS
Trigger: AGAATGACCTGCACAATGGCATGCATCGTGAGACCA...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGATCCTGCTGCACACTTaGATGAAGCTGTACCATCTG +
Preference number: 4 (lower is better)
Translates to: EYKGRRAKGSEEEAVLGGILLHT*MKLYHL
Trigger: CAGATGGTACAGCTTCATGCAAGTGTGCAGCAGGAT...CCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGGCAAAGATGTCCCACTaGAGAATGGCTCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLAKMSH*RMALPS
Trigger: TGATGGAAGAGCCATTCTGCAGTGGGACATCTTTGC...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTTCCGACTCAAAATaGTGGAAGCCGATTGTTCTC +
Preference number: 4 (lower is better)
Translates to: KSQRVRGGSCTGWAQQHISSDSK*WKPIVL
Trigger: GAGAACAATCGGCTTCCAGCATTTTGAGTCGGAAGA...GATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGGAGATATTCTCAGGCTaGTGCTTGCCAAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RCQLKSTKEEEPKGQRRKEIFSG*CLPRAA
Trigger: TGCAGCTCTTGGCAAGCAGCAGCCTGAGAATATCTC...CTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTTCATTGCCCTCAAGCTaGCGTTCTTCAGAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGASLPSS*RSSESV
Trigger: CACGGACTCTGAAGAACGGCAGCTTGAGGGCAATGA...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAACACTGATGAACAGCTaGGTCCAAATAAGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: GQRRKLYWVGTATHLSPTTLMNS*VQISCR
Trigger: ACGACAACTTATTTGGACCCAGCTGTTCATCAGTGT...TGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp ACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGGTTCTAACTTGTCCATaGCTCTGTCAAGGATGTGCA +
Preference number: 4 (lower is better)
Translates to: TGWAQQHISHPQKQPPDQVLTCP*LCQGCA
Trigger: TGCACATCCTTGACAGAGCCATGGACAAGTTAGAAC...CTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTGCTGTGGCCACTTCAAGCTaGGTAAATGGGACAATGTGG +
Preference number: 4 (lower is better)
Translates to: HRNNPQISQRDEVWLLSAVATSS*VNGTMW
Trigger: CCACATTGTCCCATTTACCCAGCTTGAAGTGGCCAC...AGCACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAATTGACAGCTTGCCAATaGATGACATTTCCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQLTACQ*MTFPGL
Trigger: CAAACCGGGAAATGTCATCCATTGGCAAGCTGTCAA...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAAAGGTGGCTGACAGTGTaGGTTGTAGAGAAGCATTAT +
Preference number: 4 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQRWLTV*VVEKHY
Trigger: ATAATGCTTCTCTACAACCCACACTGTCAGCCACCT...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCTGCAGTTGTCTTCTGTaGTTGCATTGTCACAATGCA +
Preference number: 4 (lower is better)
Translates to: AKGSEEEAVLGGHSNTSLCSCLL*LHCHNA
Trigger: TGCATTGTGACAATGCAACCACAGAAGACAACTGCA...GAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp ACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTTTGTCACAGCCACCATaGTTCTCCAAACACGGGTTG +
Preference number: 4 (lower is better)
Translates to: THRNNPQISQRDEVWLLSLSQPP*FSKHGL
Trigger: CAACCCGTGTTTGGAGAACCATGGTGGCTGTGACAA...ACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp ACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGTGGTACCGAAGAACCTaGGGCATTAAACCGTATTTG +
Preference number: 4 (lower is better)
Translates to: TGWAQQHISHPQKQPPDQWYRRT*GIKPYL
Trigger: CAAATACGGTTTAATGCCCCAGGTTCTTCGGTACCA...CTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTGCTTGGTTTACTCCACCTTaGGCAGCTGGGAGTATTGAC +
Preference number: 4 (lower is better)
Translates to: HRNNPQISQRDEVWLLSAWFTPP*AAGSID
Trigger: GTCAATACTCCCAGCTGCCCAAGGTGGAGTAAACCA...AGCACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGATTTACACTCTCCGGTaGCCGAGTACTGATCAAGGC +
Preference number: 4 (lower is better)
Translates to: RCQLKSTKEEEPKGQRRKIYTLR*PSTDQG
Trigger: GCCTTGATCAGTACTCGGCCACCGGAGAGTGTAAAT...CTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGGTAAGCAGCGGTCAATaGGCAGCTGCTCCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGVSSGQ*AAAPAH
Trigger: GTGAGCCGGAGCAGCTGCCCATTGACCGCTGCTTAC...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTCATTTGGCGTCTGCATaGCACTGCCCATTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGAHLASA*HCPLSC
Trigger: ACAGGACAATGGGCAGTGCCATGCAGACGCCAAATG...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp GGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGCCTTGTTGTCTTGGTTaGACAGGAAGTCCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: GRMEQVPAEEYKGRRAKGPCCLG*TGSPVV
Trigger: AACAACAGGACTTCCTGTTCAACCAAGACAACAAGG...CCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCGCAGGGTGGTGCCATTaGCAAGGTCATTGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: QGRKITVTHHVGQNGAGAAGWCH*QGHCRK
Trigger: TTTTCTACAATGACCTTGTCAATGGCACCACCCTGC...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp AGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGAAAGGCAACTGGTGCTaGGAATTCACAGTTGATGGC +
Preference number: 4 (lower is better)
Translates to: RCQLKSTKEEEPKGQRRKKGNWC*EFTVDG
Trigger: GCCATCAACTGTGAATTCTCAGCACCAGTTGCCTTT...CTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp AAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCATGAGGTATGGCTTCTaGGTGCTTAAAGGACTTTAC +
Preference number: 4 (lower is better)
Translates to: KSQRVRGGSCTGWAQQHIMRYGF*VLKGLY
Trigger: GTAAAGTCCTTTAAGCACTCAGAAGCCATACCTCAT...GATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTCTGTTGCACACCCCATaGACACAGTTGCACACTGAT +
Preference number: 4 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGALLHTP*TQLHTD
Trigger: ATCAGTGTGCAACTGTGTGCATGGGGTGTGCAACAG...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGCTCGAAATCCTTTCTTaGACTCACACTCATTCTGCC +
Preference number: 4 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRLEILS*THTHSA
Trigger: GGCAGAATGAGTGTGAGTGCAAGAAAGGATTTCGAG...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAAATCGGCAGCCTCAATTaGATTCGCCAGATTATATTG +
Preference number: 4 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQIGSLN*IRQIIL
Trigger: CAATATAATCTGGCGAATGCAATTGAGGCTGCCGAT...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp ACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCAGCATGGTCTCACGATaGATGCCATTGTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TGKKDHSYPSCRAEWSRCSMVSR*MPLCRS
Trigger: TGACCTGCACAATGGCATGCATCGTGAGACCATGCT...GCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACTCCATCCAAACAGATaGCATTACCAAAGCAGACAT +
Preference number: 4 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQLHPNR*HYQSRH
Trigger: ATGTCTGCTTTGGTAATGGCATCTGTTTGGATGGAG...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CCATCATGTAGGGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAAACAAGAGCTCCCGCTaGACAATTCTGCAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: PSCRAEWSRCQLKSTKEENKSSR*TILQVW
Trigger: CCAAACCTGCAGAATTGTGCAGCGGGAGCTCTTGTT...TTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCCCTACATGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGCTGCTTGCCAAGAGCTaGAACATTAATGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRLLAKS*NINVLF
Trigger: GAAGAGGACATTAATGTTGCAGCTCTTGGCAAGCAG...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp AAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCGGTATGGCTTCTGAGTaGTTAAAGGACTTTACGTTC +
Preference number: 4 (lower is better)
Translates to: KSQRVRGGSCTGWAQQHIGMASE*LKDFTF
Trigger: GAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACC...GATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp ACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCGCAGAATGGAGCAGGTaGCAGCTGAAGAGTACAAAG +
Preference number: 4 (lower is better)
Translates to: TGKKDHSYPSCRAEWSRCAEWSR*QLKSTK
Trigger: CTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGC...GCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCATAAACCTTTATTGTaGACAGTTCCTGTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHHKPLL*TVPVSG
Trigger: GCCTGACACAGGAACTGTGCACAATAAAGGTTTATG...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAATGGAAGGCGAACATCTaGAATTTTCTGGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEEWKANI*NFLGRA
Trigger: TGCTCTGCCCAGAAAATTCCAGATGTTCGCCTTCCA...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGTTTCCAAAGTTAATTTaGCAGGGGTCCACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRFPKLI*QGSTGK
Trigger: CTTGCCTGTGGACCCCTGCCAAATTAACTTTGGAAA...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATTCAAGCTGGGTAAATaGGACAATGTGGTATCTGAC +
Preference number: 4 (lower is better)
Translates to: LYWVGTATHLSPTETTPRFKLGK*DNVVSD
Trigger: GTCAGATACCACATTGTCCCATTTACCCAGCTTGAA...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACACTTTGCAAATACAACTaGCTGTCCCATTGCTGTATT +
Preference number: 4 (lower is better)
Translates to: GQRRKLYWVGTATHLSPTLCKYN*LSHCCI
Trigger: AATACAGCAATGGGACAGCCAGTTGTATTTGCAAAG...TGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGAGTGCCTAGTAGCATATaGTACTTTATTAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LYWVGTATHLSPTETTPRVPSSI*YFIRAG
Trigger: TCCAGCCCTAATAAAGTACCATATGCTACTAGGCAC...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAATGTAGCCCCGGAAGATaGAATAGTCAGGCATCTGTT +
Preference number: 4 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEECSPGR*NSQASV
Trigger: AACAGATGCCTGACTATTCCATCTTCCGGGGCTACA...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGGATGGCATTGTTGTTTaGAGCAAACACTGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRDGIVV*SKHCVG
Trigger: GCCTACACAGTGTTTGCTCCAAACAACAATGCCATC...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGAACTTTTCCCAAGCCATaGATCACTCCCTTATCAGTG +
Preference number: 4 (lower is better)
Translates to: AQQHISHPQKQPPDQPERTFPKP*ITPLSV
Trigger: CACTGATAAGGGAGTGATCCATGGCTTGGGAAAAGT...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTGACGGAGATGACTATTaGCTCTCCTTGGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGADGDDY*LSLEGS
Trigger: ACTTCCCTCCAAGGAGAGCCAATAGTCATCTCCGTC...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATTGTCCTTGTTGTCTTaGTTGAACAGGAAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LYWVGTATHLSPTETTPRLSLLS*LNRKSC
Trigger: ACAGGACTTCCTGTTCAACCAAGACAACAAGGACAA...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp ACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGACAATTCTGCAGGTTTaGCCATTCAGAAAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: TGWAQQHISHPQKQPPDQTILQV*PFRKRS
Trigger: TGACCTCTTTCTGAATGGCCAAACCTGCAGAATTGT...CTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATAAGCACCTGTCAGGCTaGCTTAGCTATTTTAACTTA +
Preference number: 4 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHKHLSG*LSYFNL
Trigger: TAAGTTAAAATAGCTAAGTCAGCCTGACAGGTGCTT...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp GCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCAGTTTCACAAAGTATTaGGCAGCTTTATTATCCACC +
Preference number: 4 (lower is better)
Translates to: AKGSEEEAVLGGHSNTSLSFTKY*AALLST
Trigger: GGTGGATAATAAAGCTGCTCAATACTTTGTGAAACT...GAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATATTCGATGTTCATCTaGCCAGCAATTATGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LYWVGTATHLSPTETTPRYSMFI*PAIMWS
Trigger: ACTCCACATAATTGCTGGTCAGATGAACATCGAATA...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp AAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCGAGGGAAGTAGCATTTaGGATCAATTTCAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: KSQRVRGGSCTGWAQQHIEGSSI*DQFQVF
Trigger: GAAAACCTGAAATTGATCTCAAATGCTACTTCCCTC...GATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAAGCATCTCGTATCACATaGAACTTCAAATACTCCTTC +
Preference number: 4 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQASRIT*NFKYSF
Trigger: GAAGGAGTATTTGAAGTTTCATGTGATACGAGATGC...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCACACGCCGTCCCATTaGAGCCGGTGTTGCATTTAC +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGHTPSH*SRCCIY
Trigger: GTAAATGCAACACCGGCTTCAATGGGACGGCGTGTG...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CCATCATGTAGGGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAATGTAGAAAAACATGCTaGCATTGGCGAGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PSCRAEWSRCQLKSTKEECRKTC*HWRGGA
Trigger: AGCACCACCTCGCCAATGTCAGCATGTTTTTCTACA...TTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCCCTACATGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp GGTATGGCTTCTGAGTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCAGGTTCTGGGGGAGCTaGGGTTGTGCTCTCATACAA +
Preference number: 4 (lower is better)
Translates to: GMASECLKDFTFLKGNWCRFWGS*GCALIQ
Trigger: TTGTATGAGAGCACAACCTCAGCTCCCCCAGAACCT...GCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GGTATGGCTTCTGAGTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTCACATCTTCTTGCCTaGCCTGTGGTTTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GMASECLKDFTFLKGNWCSHLLA*PVVSAG
Trigger: CCCAGCTGAAACCACAGGGCAGGCAAGAAGATGTGA...GCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGTGGGCAGAGCAAGGCTaGACATTCAGGGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGWAEQG*TFRDGL
Trigger: AAGCCCATCCCTGAATGTGCAGCCTTGCTCTGCCCA...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CCATCATGTAGGGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGACGGTGGTGCAATTTaGATTCCTATGACACGGGTT +
Preference number: 4 (lower is better)
Translates to: PSCRAEWSRCQLKSTKEEDGGAI*IPMTRV
Trigger: AACCCGTGTCATAGGAATGCAAATTGCACCACCGTC...TTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCCCTACATGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGTTCAGTTCGGCCTGGTaGGACGGTGGTGCAATTTGC +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGFSSAW*DGGAIC
Trigger: GCAAATTGCACCACCGTCGCACCAGGCCGAACTGAA...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GGTATGGCTTCTGAGTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGGGTCCTGTCTGTGTaGACTCCGCATTCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: GMASECLKDFTFLKGNWCWVLSV*TPHSCH
Trigger: GTGACAAGAATGCGGAGTGCACACAGACAGGACCCA...GCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTGTTGCTCTCAAATGTaGGTTCTAACTTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GRMEQVPAEEYKGRRAKGCCSQM*VLTCPW
Trigger: CCATGGACAAGTTAGAACCCACATTTGAGAGCAACA...CCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGTAGCATTGTCATTATaGTTTGCTCATTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GQRRKLYWVGTATHLSPTVALSL*FAHCCS
Trigger: AGAGCAACAATGAGCAAACCATAATGACAATGCTAC...TGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGAAACAAAAATGGTGTATaGTCCACCAACTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: AQQHISHPQKQPPDQPERNKNGV*STNSIL
Trigger: GAGGATGGAGTTGGTGGACCATACACCATTTTTGTT...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGGTAAATGGGACAATGTaGTATCTGACGAGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: EYKGRRAKGSEEEAVLGGVNGTM*YLTSSR
Trigger: TCTGGAACTCGTCAGATACCACATTGTCCCATTTAC...CCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp ACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGTATCAGTGGCTACATTaGTGTAGTTTATTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TGWAQQHISHPQKQPPDQYQWLH*CSLLEP
Trigger: AGGCTCCAATAAACTACACCAATGTAGCCACTGATA...CTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAATCACTCCCTTATCAGTaGCTACATTGGTGTAGTTTA +
Preference number: 4 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQSLPYQ*LHWCSL
Trigger: TAAACTACACCAATGTAGCCACTGATAAGGGAGTGA...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAACTCACACATTTTGGCTaGCACCCAATAAACAGGGTT +
Preference number: 4 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEELTHFG*HPINRV
Trigger: AACCCTGTTTATTGGGTGCCAGCCAAAATGTGTGAG...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp ACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTGGTTCTCACACATTTTaGCTGGCACCCAATAAACAG +
Preference number: 4 (lower is better)
Translates to: THRNNPQISQRDEVWLLSGSHTF*LAPNKQ
Trigger: CTGTTTATTGGGTGCCAGCCAAAATGTGTGAGAACC...ACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAAATCTCCAATGTAGTTTaGCTTGCAAGTACAAGTCCT +
Preference number: 4 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQISNVV*LASTSP
Trigger: AGGACTTGTACTTGCAAGCCAAACTACATTGGAGAT...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGAAAATGCTCCTGCAACTaGAAGAAATACTGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LYWVGTATHLSPTETTPRKCSCN*KKYWEV
Trigger: AACTTCCCAGTATTTCTTCCAGTTGCAGGAGCATTT...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCCAGAAGAGAGTGACTaGGGTGTGGATGGGATCGGT +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGPEESD*GVDGIG
Trigger: ACCGATCCCATCCACACCCCAGTCACTCTCTTCTGG...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGCCACAGCTAAAACCTTaGCATCTCGTATCACATGAA +
Preference number: 4 (lower is better)
Translates to: GRMEQVPAEEYKGRRAKGPQLKP*HLVSHE
Trigger: TTCATGTGATACGAGATGCCAAGGTTTTAGCTGTGG...CCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGGAACCAGGAGATAGGTaGGACCTGCCTTCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGEPGDR*DLPSER
Trigger: CCTTTCTGAAGGCAGGTCTCACCTATCTCCTGGTTC...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp GGTATGGCTTCTGAGTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTTTCACACTCAGCTCTaGACCTTGCAGGGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GMASECLKDFTFLKGNWCFHTQL*TLQGLP
Trigger: TGGAAGACCCTGCAAGGTTCAGAGCTGAGTGTGAAA...GCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCCGTCAGGAAGTTTGTaGGTGAGGGGAAGGACATCA +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGPSGSL*VRGRTS
Trigger: TGATGTCCTTCCCCTCACTCACAAACTTCCTGACGG...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGTGGTTTGCTCATTGTTaGTCTCAAATGTGGGTTCTA +
Preference number: 4 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLWFAHC*SQMWVL
Trigger: TAGAACCCACATTTGAGAGCAACAATGAGCAAACCA...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CCATCATGTAGGGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGTTGTCTTCTGTGGTTaGATTGTCACAATGCACTCC +
Preference number: 4 (lower is better)
Translates to: PSCRAEWSRCQLKSTKEEVVFCG*IVTMHS
Trigger: GGAGTGCATTGTGACAATGCAACCACAGAAGACAAC...TTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCCCTACATGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGTTTCCAGGCACACAATaGCATCACCCGTGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGFPGTQ*HHPCSL
Trigger: CAGGCTACACGGGTGATGGCATTGTGTGCCTGGAAA...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCAATGTAGTTTGGCTTaGAAGTACAAGTCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHQCSLA*KYKSFL
Trigger: TAGAAAGGACTTGTACTTGCAAGCCAAACTACATTG...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGTTTTCATCTTCAGTaGAAGGCGAACATCTGGAAT +
Preference number: 4 (lower is better)
Translates to: AQQHISHPQKQPPDQPERCFHLQ*KANIWN
Trigger: ATTCCAGATGTTCGCCTTCCACTGAAGATGAAAACA...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGGGCCTGGTGCGACGGTaGTGCAATTTGCATTCCTAT +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGGLVRR*CNLHSY
Trigger: ATAGGAATGCAAATTGCACCACCGTCGCACCAGGCC...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTGAGGTCCGTATTTATTaGGATCAGAGCAGAACTGAC +
Preference number: 4 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGAEVRIY*DQSRTD
Trigger: GTCAGTTCTGCTCTGATCCCAATAAATACGGACCTC...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGAACTGGAAGAAATACTaGGAAGTTTTCGGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GRMEQVPAEEYKGRRAKGNWKKY*EVFGFL
Trigger: CAAGAACCCGAAAACTTCCCAGTATTTCTTCCAGTT...CCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GGTATGGCTTCTGAGTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCCTGCTTCACACCCTTTaGTTTACTCCACCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GMASECLKDFTFLKGNWCLLHTL*FTPPWA
Trigger: TGCCCAAGGTGGAGTAAACCAAAGGGTGTGAAGCAG...GCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGAAGGTCAGCTTATACTaGCCCAGTGGGGAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGKVSLY*PSGERR
Trigger: TCTACGCTCCCCACTGGGCCAGTATAAGCTGACCTT...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAATGTTGTAGCATCATaGGGAAATATTTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRNVVAS*GNICSF
Trigger: GAAGGAGCAAATATTTCCTCATGATGCTACAACATT...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGACAATTTGCATTCCTATaGCACGGGTTATCTGATTTA +
Preference number: 4 (lower is better)
Translates to: AQQHISHPQKQPPDQPERQFAFL*HGLSDL
Trigger: TAAATCAGATAACCCGTGTCATAGGAATGCAAATTG...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTGGTTTGTTCCAAGCATaGAGTTATTGGTTCACAGTC +
Preference number: 4 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGAGLFQA*SYWFTV
Trigger: GACTGTGAACCAATAACTTCATGCTTGGAACAAACC...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp ACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCAGACTTTCTTCTCCCTaGTGTAATTCTCGATGGCAT +
Preference number: 4 (lower is better)
Translates to: TGKKDHSYPSCRAEWSRCRLSSP*CNSRWH
Trigger: ATGCCATCGAGAATTACATCAGGGAGAAGAAAGTCT...GCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCATCTAGTCCACTGTTaGACACCCCATGCACACAGT +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGHLVHC*TPHAHS
Trigger: ACTGTGTGCATGGGGTGTGCAACAGTGGACTAGATG...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTTGTCTATCCTGTTATTaGATGTTCCGTGAACGCACA +
Preference number: 4 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGACLSCY*MFRERT
Trigger: TGTGCGTTCACGGAACATGCAATAACAGGATAGACA...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GGTATGGCTTCTGAGTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCGAAGAAGACAGGGTCTaGAGATCTGCCACTCTGTAT +
Preference number: 4 (lower is better)
Translates to: GMASECLKDFTFLKGNWCEEDRV*RSATLY
Trigger: ATACAGAGTGGCAGATCTGCAGACCCTGTCTTCTTC...GCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGAGAATTCACAGTTCCGTTAAGGCCGTCTaGACAGGGGTCTATCTCTGT +
Preference number: 4 (lower is better)
Translates to: VLKGLYVPKRQLVLRIHSSVKAV*TGVYLC
Trigger: ACAGAGATAGACCCCTGTGCAGACGGCCTTAACGGA...ACTGTGAATTCTCAGCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp ACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTTTCAGAAAGGAAAAATaGCAAATCCAGGAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: THRNNPQISQRDEVWLLSFRKEK*QIQESW
Trigger: CCAAGACTCCTGGATTTGCCATTTTTCCTTTCTGAA...ACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCCACCAAACCCTTCTTaGCAGGAGCAGGTTCCATTT +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGPPNPS*QEQVPF
Trigger: AAATGGAACCTGCTCCTGCCAAGAAGGGTTTGGTGG...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCAGGCATGTCCCAAATTaGTTTCCTCTAACAAAGATC +
Preference number: 4 (lower is better)
Translates to: QGRKITVTHHVGQNGAGARHVPN*FPLTKI
Trigger: GATCTTTGTTAGAGGAAACCAATTTGGGACATGCCT...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GGTATGGCTTCTGAGTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGCTGTATTCACAGGTaGCGTGGATGTGACAGAACT +
Preference number: 4 (lower is better)
Translates to: GMASECLKDFTFLKGNWCCCIHR*RGCDRT
Trigger: AGTTCTGTCACATCCACGCCACCTGTGAATACAGCA...GCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGTTCCATCAACAAACCTaGTCTCCGTCGGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGFHQQT*SPSVGV
Trigger: CACTCCAACCGACGGAGACCAGGTTTGTTGATGGAA...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCAAAGCTCATTTACATTaGATCCTTTCAGTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: QGRKITVTHHVGQNGAGAKAHLH*ILSVPC
Trigger: ACAAGGGACTGAAAGGATTCAATGTAAATGAGCTTT...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp ACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCTCACATCTGTTCTTCTaGATTTCCAGAACTTTTCCC +
Preference number: 4 (lower is better)
Translates to: TGKKDHSYPSCRAEWSRCSHLFF*ISRTFP
Trigger: GGGAAAAGTTCTGGAAATTCAGAAGAACAGATGTGA...GCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp AACTATAAAAGGAAATCAGGCAGGTGGAATATATCCAGGCTGGATATGGTTTTGTGGGCAGGTCAGCTCTaGGGAGCATGTCCTACATCT +
Preference number: 4 (lower is better)
Translates to: NYKRKSGRWNISRLDMVLWAGQL*GACPTS
Trigger: AGATGTAGGACATGCTCCTCAGAGCTGACCTGCCCA...CAAAACCATATCCAGCCTGGATATATTCCACCTGCCTGATTTCCTTTTATAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549474.1
CDS-3UTR GCA 90 bp GTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGAGAATTCACAGTTCAGGCTCCCAAACCTaGCACTGTAGACACATCTGT +
Preference number: 4 (lower is better)
Translates to: VLKGLYVPKRQLVLRIHSSGSQT*HCRHIC
Trigger: ACAGATGTGTCTACAGTGGCAGGTTTGGGAGCCTGA...ACTGTGAATTCTCAGCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCGTAGCCATTGTTTGTTaGCAAAGTCGTAAGATTTTG +
Preference number: 4 (lower is better)
Translates to: QGRKITVTHHVGQNGAGAVAIVC*QSRKIL
Trigger: CAAAATCTTACGACTTTGGCAACAAACAATGGCTAC...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGACAACTGTGCCGATTTaGTCCCAGGTACGTACAATG +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGTTVPI*SQVRTM
Trigger: CATTGTACGTACCTGGGACCAAATCGGCACAGTTGT...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGAGAATTCACAGTTCTTACAGTCAGCCTTaGCAGAGCAACCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: VLKGLYVPKRQLVLRIHSSYSQP*QSNLHC
Trigger: GCAATGGAGGTTGCTCTGCCAAGGCTGACTGTAAGA...ACTGTGAATTCTCAGCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp GTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGAGAATTCACAGTACAGAGAGTATGTTCTaGCCTCAAAGGTGTACCTGC +
Preference number: 4 (lower is better)
Translates to: VLKGLYVPKRQLVLRIHSTESMF*PQRCTC
Trigger: GCAGGTACACCTTTGAGGTCAGAACATACTCTCTGT...ACTGTGAATTCTCAGCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp AGGAAATCAGGCAGGTGGAATATATCCAGGCTGGATATGGTTTTGGATATGGAAGGGTTCGTCTTCCCATaGAATAGGAGGTATAGATGC +
Preference number: 4 (lower is better)
Translates to: RKSGRWNISRLDMVLDMEGFVFP*NRRYRC
Trigger: GCATCTATACCTCCTATTTCATGGGAAGACGAACCC...TTCCATATCCAAAACCATATCCAGCCTGGATATATTCCACCTGCCTGATTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549474.1
CDS-3UTR GCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGGGAGGTAATCGAGAGTaGCGTCCTTCATGTTATTCA +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGGGNRE*RPSCYS
Trigger: TGAATAACATGAAGGACGGCACTCTCGATTACCTCC...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGAGAATTCACAGTCCAAGTGAAGGAAGTTaGCCTGCAAAGATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: VLKGLYVPKRQLVLRIHSPSEGS*PAKMLP
Trigger: TGGCAACATCTTTGCAGGGCAACTTCCTTCACTTGG...ACTGTGAATTCTCAGCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp GTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGAGAATTCACAGTCGATGCATGCCATTGTaGAGGTCATTCTTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: VLKGLYVPKRQLVLRIHSRCMPL*RSFFRS
Trigger: ACTCCTGAAGAATGACCTGCACAATGGCATGCATCG...ACTGTGAATTCTCAGCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp CACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTGCTAAAGTCGTAAGATTTTaGAGAATTCTTCCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: HRNNPQISQRDEVWLLSAKVVRF*RILPEL
Trigger: CAACTCTGGAAGAATTCTGCAAAATCTTACGACTTT...AGCACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp ACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCTATTTGGAACAAAAATaGTGTATGGTCCACCAACTC +
Preference number: 4 (lower is better)
Translates to: TGKKDHSYPSCRAEWSRCYLEQK*CMVHQL
Trigger: GAGTTGGTGGACCATACACCATTTTTGTTCCAAATA...GCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CCA 90 bp GTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGAGAATTCACAGTGTTTCATCACATCGATaGGGCAGAATCGGGACAATG +
Preference number: 4 (lower is better)
Translates to: VLKGLYVPKRQLVLRIHSVSSHR*GRIGTM
Trigger: CATTGTCCCGATTCTGCCCCATCGATGTGATGAAAC...ACTGTGAATTCTCAGCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR TCA 90 bp GTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGAGAATTCACAGTCCACAACTGTGCATGTaGTTCCGTCACCTTCATAAT +
Preference number: 4 (lower is better)
Translates to: VLKGLYVPKRQLVLRIHSPQLCM*FRHLHN
Trigger: ATTATGAAGGTGACGGAATCACATGCACAGTTGTGG...ACTGTGAATTCTCAGCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGGTCCATAGAAGCCTTTaGAGCACTTTGGAATCTTCA +
Preference number: 4 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGVHRSL*STLESS
Trigger: TGAAGATTCCAAAGTGCTGCAAAGGCTTCTATGGAC...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp ATGGTTTTGGATATGGAATCTCTCTTCTCTGACAAGATTTCTTGCTGCGGTCCTGACAAGATTTCTTGCTaGGGTCCTCAACTGGCTATA +
Preference number: 4 (lower is better)
Translates to: MVLDMESLFSDKISCCGPDKISC*GPQLAI
Trigger: TATAGCCAGTTGAGGACCGCAGCAAGAAATCTTGTC...AGGACCGCAGCAAGAAATCTTGTCAGAGAAGAGAGATTCCATATCCAAAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549474.1
CDS-3UTR TCA 90 bp GTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGAGAATTCACAGTTGGAATATTGCTCTGTaGCAACCAGAAGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: VLKGLYVPKRQLVLRIHSWNIAL*QPEAFL
Trigger: GAGAAAAGCTTCTGGTTGTCACAGAGCAATATTCCA...ACTGTGAATTCTCAGCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR GCA 90 bp TATAAAAGGAAATCAGGCAGGTGGAATATATCCAGGCTGGATATGGTTTTGGATTCTGACAAGATTTCTTaGTGCGGTCCTCAACTGGCT +
Preference number: 4 (lower is better)
Translates to: YKRKSGRWNISRLDMVLDSDKIS*CGPQLA
Trigger: AGCCAGTTGAGGACCGCAGCAAGAAATCTTGTCAGA...ATCCAAAACCATATCCAGCCTGGATATATTCCACCTGCCTGATTTCCTTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549474.1
CDS-3UTR CCA 90 bp GGCAGGTGGAATATATCCAGGCTGGATATGGTTTTGGATATGGAATCTCTCTTCGGAATATATCCAGGCTaGATATGGTTTTGGATATGG +
Preference number: 4 (lower is better)
Translates to: GRWNISRLDMVLDMESLFGIYPG*IWFWIW
Trigger: CCATATCCAAAACCATATCCAGCCTGGATATATTCC...GAAGAGAGATTCCATATCCAAAACCATATCCAGCCTGGATATATTCCACCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549474.1
3UTR CAA 72 bp TCAGGCAGGTGGAATATATCCAGGCTGGATATGGTTTaGGATATGGAATCTCTCTTCTCTGACAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: SGRWNISRLDMV*DMESLFSDKIS
Trigger: AGAAATCTTGTCAGAGAAGAGAGATTCCATATCCAAAACCATATCCAGCCTGGATATATTCCACCTGCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549474.1
CDS-3UTR CCA 90 bp TCAACTATAAAAGGAAATCAGGCAGGTGGAATATATCCAGGCTGGATATGGTTTAGGAAATCAGGCAGGTaGAATATATCCAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: STIKGNQAGGIYPGWIWFRKSGR*NISRLD
Trigger: ATCCAGCCTGGATATATTCCACCTGCCTGATTTCCT...AAACCATATCCAGCCTGGATATATTCCACCTGCCTGATTTCCTTTTATAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549474.1
CDS-3UTR CCA 90 bp GTTGCAACTTCAACTATAAAAGGAAATCAGGCAGGTGGAATATATCCAGGCTGGATATGGTTTTGGATATaGAATCTCTCTTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: VATSTIKGNQAGGIYPGWIWFWI*NLSSLT
Trigger: TGTCAGAGAAGAGAGATTCCATATCCAAAACCATAT...CCAGCCTGGATATATTCCACCTGCCTGATTTCCTTTTATAGTTGAAGTTGCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549474.1
CDS-3UTR CCA 90 bp TATCCAGGCTGGATATGGTTTTGGATATGGAATCTCTCTTCTCTGACAAGATTTTATCCAGGCTGGATATaGTTTTGGATATGGAATCTC +
Preference number: 4 (lower is better)
Translates to: YPGWIWFWIWNLSSLTRFYPGWI*FWIWNL
Trigger: GAGATTCCATATCCAAAACCATATCCAGCCTGGATA...AAATCTTGTCAGAGAAGAGAGATTCCATATCCAAAACCATATCCAGCCTGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549474.1
CDS GCA 90 bp CTGGTCCTCCAGGGCAGGCCTGACAGTCTCGCCCGAAGTAGCCCTTaGAGCACCTGGGGATCTGTATCACCAGGCTGCACCGCTCCCGGC +
Preference number: 5 (lower is better)
Translates to: LVLQGRPDSLARSSP*STWGSVSPGCTAPG
Trigger: GCCGGGAGCGGTGCAGCCTGGTGATACAGATCCCCAGGTGCTGCAAGGGCTACTTCGGGCGAGACTGTCAGGCCTGCCCTGGAGGACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 90 bp AGGGGCCTGTCCACCCCGTTTCACAGAGGCACTGCCCGGAGCCCGTaGTGCCATCATCGCACTGTCCGTGGTCTGAGCAGCCACAGGGCA +
Preference number: 5 (lower is better)
Translates to: RGLSTPFHRGTARSP*CHHRTVRGLSSHRA
Trigger: TGCCCTGTGGCTGCTCAGACCACGGACAGTGCGATGATGGCATCACGGGCTCCGGGCAGTGCCTCTGTGAAACGGGGTGGACAGGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp CAGGGCAGGCCTGACAGTCTCGCCCGAAGTAGCCCTTGCAGCACCTaGGGATCTGTATCACCAGGCTGCACCGCTCCCGGCAGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: QGRPDSLARSSPCST*GSVSPGCTAPGSLP
Trigger: TGGAAGGCTGCCGGGAGCGGTGCAGCCTGGTGATACAGATCCCCAGGTGCTGCAAGGGCTACTTCGGGCGAGACTGTCAGGCCTGCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 90 bp GAAGGCTGTGGGGTAGGCAACCCGCCCGGTCTCCAGCCAGCCTGCTaGGCACAGGTGGTACTTGGCCTGCAGGGATACAGACAGGGCCAT +
Preference number: 5 (lower is better)
Translates to: EGCGVGNPPGLQPAC*AQVVLGLQGYRQGH
Trigger: ATGGCCCTGTCTGTATCCCTGCAGGCCAAGTACCACCTGTGCTCAGCAGGCTGGCTGGAGACCGGGCGGGTTGCCTACCCCACAGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548073.1
CDS CCA 90 bp CAACCCGCCCGGTCTCCAGCCAGCCTGCTGAGCACAGGTGGTACTTaGCCTGCAGGGATACAGACAGGGCCATGGGTCAGCTGCAAGTTC +
Preference number: 5 (lower is better)
Translates to: QPARSPASLLSTGGT*PAGIQTGPWVSCKF
Trigger: GAACTTGCAGCTGACCCATGGCCCTGTCTGTATCCCTGCAGGCCAAGTACCACCTGTGCTCAGCAGGCTGGCTGGAGACCGGGCGGGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548073.1
CDS-3UTR CAA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCATGCTGCTGCCTTGTGTaGGGAGGCAGGATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSCCCLV*GGRMGW
Trigger: CCAGCCCATCCTGCCTCCCAACACAAGGCAGCAGCA...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS GCA 90 bp CCCGGGACCCACATACAAACAGGATGCGTTGTCGTGGCAGCCGCCTaGACTGGGCAGCAGGCAGTTGTTGATCTCCGAGCAGTCTCTCCC +
Preference number: 5 (lower is better)
Translates to: PGTHIQTGCVVVAAA*TGQQAVVDLRAVSP
Trigger: GGGAGAGACTGCTCGGAGATCAACAACTGCCTGCTGCCCAGTGCAGGCGGCTGCCACGACAACGCATCCTGTTTGTATGTGGGTCCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp CGCCCGGTCTCCAGCCAGCCTGCTGAGCACAGGTGGTACTTGGCCTaGAGGGATACAGACAGGGCCATGGGTCAGCTGCAAGTTCATGTG +
Preference number: 5 (lower is better)
Translates to: RPVSSQPAEHRWYLA*RDTDRAMGQLQVHV
Trigger: CACATGAACTTGCAGCTGACCCATGGCCCTGTCTGTATCCCTGCAGGCCAAGTACCACCTGTGCTCAGCAGGCTGGCTGGAGACCGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548073.1
CDS CCA 90 bp GTCCCGCCCAGACAAGGTCTCATTCTCCCCCAGCCCACTGTTCTGTaGCACAAAGAGGGTGCCGCGGATGGACAGGTCAGTCAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: VPPRQGLILPQPTVL*HKEGAADGQVSQVF
Trigger: GAACACCTGACTGACCTGTCCATCCGCGGCACCCTCTTTGTGCCACAGAACAGTGGGCTGGGGGAGAATGAGACCTTGTCTGGGCGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388887.7
ENST00000548579.1
CDS-3UTR CAA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCACTGGGGGAGCTGAGGTaGTGCTCTCATACAAGGGGT +
Preference number: 5 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSLGELR*CSHTRG
Trigger: ACCCCTTGTATGAGAGCACAACCTCAGCTCCCCCAG...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR CAA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCAGTCCTCAAGGGGTCATaGCCCTCAAGCTGCCGTTCT +
Preference number: 5 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSVLKGS*PSSCRS
Trigger: AGAACGGCAGCTTGAGGGCAATGACCCCTTGAGGAC...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS TCA 90 bp ATTTCCTTCCATGCCTTCAGCACAACTGCCTCTGCCATTGCAGGGTaGCCCCGCTCCACCTGGGCACTCTATACAGTCTGGGCCCCAGCG +
Preference number: 5 (lower is better)
Translates to: ISFHAFSTTASAIAG*PRSTWALYTVWAPA
Trigger: CGCTGGGGCCCAGACTGTATAGAGTGCCCAGGTGGAGCGGGGTCACCCTGCAATGGCAGAGGCAGTTGTGCTGAAGGCATGGAAGGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 90 bp ACAGGTGGCGTGGATGTGACAGAACTGCACGTAGGGCCCACAGGCTaGGGTCTGCTTATCACAGAGTCTCCCGGCAGAGCCGTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: TGGVDVTELHVGPTG*GLLITESPGRAVSA
Trigger: TGCAGAGACGGCTCTGCCGGGAGACTCTGTGATAAGCAGACCTCAGCCTGTGGGCCCTACGTGCAGTTCTGTCACATCCACGCCACCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 90 bp CAGGCCCGAATCTCCCCGGCCAGCACATCTCACACGCCGTCCCATTaGAGCCGGTGTTGCATTTACACTCTCCGGTGGCCGAGTACTGAT +
Preference number: 5 (lower is better)
Translates to: QARISPASTSHTPSH*SRCCIYTLRWPSTD
Trigger: ATCAGTACTCGGCCACCGGAGAGTGTAAATGCAACACCGGCTTCAATGGGACGGCGTGTGAGATGTGCTGGCCGGGGAGATTCGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 90 bp CACTTGTGCTTGCCCGGGCCTGTCATCTTACAGGTGGCGTGCTCGTaGCACCCTCCGTTAAGGCCGTCTGCACAGGGGTCTATCTCTGTG +
Preference number: 5 (lower is better)
Translates to: HLCLPGPVILQVACS*HPPLRPSAQGSISV
Trigger: CACAGAGATAGACCCCTGTGCAGACGGCCTTAACGGAGGGTGTCACGAGCACGCCACCTGTAAGATGACAGGCCCGGGCAAGCACAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp TCTCTGTGCAGCTGTGCCCGTCCCCTTTGTATCCCTTCTGGCAGCTaGAGGAGACCTTCGTGCCCTTCTGGGAGCATCTGGCCACCTTTG +
Preference number: 5 (lower is better)
Translates to: SLCSCARPLCIPSGS*RRPSCPSGSIWPPL
Trigger: CAAAGGTGGCCAGATGCTCCCAGAAGGGCACGAAGGTCTCCTGCAGCTGCCAGAAGGGATACAAAGGGGACGGGCACAGCTGCACAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp TCTCCCCCAGCCCACTGTTCTGTGGCACAAAGAGGGTGCCGCGGATaGACAGGTCAGTCAGGTGTTCTAGAAATGCACGGCCTCGAGCTG +
Preference number: 5 (lower is better)
Translates to: SPPAHCSVAQRGCRG*TGQSGVLEMHGLEL
Trigger: CAGCTCGAGGCCGTGCATTTCTAGAACACCTGACTGACCTGTCCATCCGCGGCACCCTCTTTGTGCCACAGAACAGTGGGCTGGGGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000388887.7
ENST00000548073.1
ENST00000548579.1
CDS-3UTR CAA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCAGCTGAGAATTCACAGTaGATGGCCCAGGTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSAENSQ*MAQVAV
Trigger: CACTGCCACCTGGGCCATCAACTGTGAATTCTCAGC...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR CAA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCAGCTGGGCGTGTTTGTTaGTGCTGCTGCCTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSAGRVC*CCCLVL
Trigger: CAACACAAGGCAGCAGCACAAACAAACACGCCCAGC...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS GCA 90 bp CTTGGCAGGAGCAGGTTCCATTTCCTTCCATGCCTTCAGCACAACTaGCTCTGCCATTGCAGGGTGACCCCGCTCCACCTGGGCACTCTA +
Preference number: 5 (lower is better)
Translates to: LGRSRFHFLPCLQHN*LCHCRVTPLHLGTL
Trigger: TAGAGTGCCCAGGTGGAGCGGGGTCACCCTGCAATGGCAGAGGCAGTTGTGCTGAAGGCATGGAAGGAAATGGAACCTGCTCCTGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp CATCTTACAGGTGGCGTGCTCGTGACACCCTCCGTTAAGGCCGTCTaGACAGGGGTCTATCTCTGTGCAGCTGTGCCCGTCCCCTTTGTA +
Preference number: 5 (lower is better)
Translates to: HLTGGVLVTPSVKAV*TGVYLCAAVPVPFV
Trigger: TACAAAGGGGACGGGCACAGCTGCACAGAGATAGACCCCTGTGCAGACGGCCTTAACGGAGGGTGTCACGAGCACGCCACCTGTAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp GTATCCTGGAAGTGGAGGTCGACACATTTGGCGTCTGCATGGCACTaGCCATTGTCCTGTAAGCAGCGGTCAATGGGCAGCTGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: VSWKWRSTHLASAWH*PLSCKQRSMGSCSG
Trigger: GCCGGAGCAGCTGCCCATTGACCGCTGCTTACAGGACAATGGGCAGTGCCATGCAGACGCCAAATGTGTCGACCTCCACTTCCAGGATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp GAGGCAGGATGGGCTGGGGGTAGGGCCACCTGTTTTAGTCTCTCCTaGTTGAAGCTGGGTGGCCCAAGACAAATCATCCCAACTCGGCTG +
Preference number: 5 (lower is better)
Translates to: EAGWAGGRATCFSLS*LKLGGPRQIIPTRL
Trigger: CAGCCGAGTTGGGATGATTTGTCTTGGGCCACCCAGCTTCAAGCAGGAGAGACTAAAACAGGTGGCCCTACCCCCAGCCCATCCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS CCA 90 bp CCTTTGTATCCCTTCTGGCAGCTGCAGGAGACCTTCGTGCCCTTCTaGGAGCATCTGGCCACCTTTGCACAGCCCCCGTTGTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: PLYPFWQLQETFVPF*EHLATFAQPPLSCL
Trigger: CAAACAGGACAACGGGGGCTGTGCAAAGGTGGCCAGATGCTCCCAGAAGGGCACGAAGGTCTCCTGCAGCTGCCAGAAGGGATACAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp TGGCGTCTGCATGGCACTGCCCATTGTCCTGTAAGCAGCGGTCAATaGGCAGCTGCTCCGGCTCACAGTTCAGCCCATCTCCGACATAGT +
Preference number: 5 (lower is better)
Translates to: WRLHGTAHCPVSSGQ*AAAPAHSSAHLRHS
Trigger: ACTATGTCGGAGATGGGCTGAACTGTGAGCCGGAGCAGCTGCCCATTGACCGCTGCTTACAGGACAATGGGCAGTGCCATGCAGACGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGACAACTGCCTCTGCCATaGCAGGGTGACCCCGCTCCA +
Preference number: 5 (lower is better)
Translates to: LYWVGTATHLSPTETTPRQLPLP*QGDPAP
Trigger: TGGAGCGGGGTCACCCTGCAATGGCAGAGGCAGTTG...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCCCTGGTCTCCGTCGGTaGGAGTGGGTCCTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: QGRKITVTHHVGQNGAGAPGLRR*EWVLAG
Trigger: GCCAGCCAGGACCCACTCCAACCGACGGAGACCAGG...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCATTTAGTCTCTCCTGCTaGAAGCTGGGTGGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSFSLSC*KLGGPR
Trigger: TCTTGGGCCACCCAGCTTCAAGCAGGAGAGACTAAA...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS-3UTR CAA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCAATGTGCTGGGCGTGTTaGTTTGTGCTGCTGCCTTGT +
Preference number: 5 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSMCWAC*FVLLPC
Trigger: ACAAGGCAGCAGCACAAACAAACACGCCCAGCACAT...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS GCA 90 bp AGGTTCCATTTCCTTCCATGCCTTCAGCACAACTGCCTCTGCCATTaGAGGGTGACCCCGCTCCACCTGGGCACTCTATACAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: RFHFLPCLQHNCLCH*RVTPLHLGTLYSLG
Trigger: GCCCAGACTGTATAGAGTGCCCAGGTGGAGCGGGGTCACCCTGCAATGGCAGAGGCAGTTGTGCTGAAGGCATGGAAGGAAATGGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp GCTGCAGGAGACCTTCGTGCCCTTCTGGGAGCATCTGGCCACCTTTaGACAGCCCCCGTTGTCCTGTTTGCAGAAATCCACAACTGTGCA +
Preference number: 5 (lower is better)
Translates to: AAGDLRALLGASGHL*TAPVVLFAEIHNCA
Trigger: TGCACAGTTGTGGATTTCTGCAAACAGGACAACGGGGGCTGTGCAAAGGTGGCCAGATGCTCCCAGAAGGGCACGAAGGTCTCCTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp CAGGTGGTACTTGGCCTTCTGGGCATAGGAGAGCTGGTTGTAGGTTaGCATGGTCGCAGCTTCGTTGGCACAGGCCTCTCTGGCTTTGTC +
Preference number: 5 (lower is better)
Translates to: QVVLGLLGIGELVVG*HGRSFVGTGLSGFV
Trigger: GACAAAGCCAGAGAGGCCTGTGCCAACGAAGCTGCGACCATGGCAACCTACAACCAGCTCTCCTATGCCCAGAAGGCCAAGTACCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp AGGTCTCATTCTCCCCCAGCCCACTGTTCTGTGGCACAAAGAGGGTaGCGCGGATGGACAGGTCAGTCAGGTGTTCTAGAAATGCACGGC +
Preference number: 5 (lower is better)
Translates to: RSHSPPAHCSVAQRG*RGWTGQSGVLEMHG
Trigger: GCCGTGCATTTCTAGAACACCTGACTGACCTGTCCATCCGCGGCACCCTCTTTGTGCCACAGAACAGTGGGCTGGGGGAGAATGAGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388887.7
ENST00000548579.1
CDS CCA 90 bp GCCATCACCCGTGTAGCCTGCTTTGCACGTGCACACTCGCCTTCCTaGGGTGGTTCTCTTACAGTCAGCCTTGGCAGAGCAACCTCCATT +
Preference number: 5 (lower is better)
Translates to: AITRVACFARAHSPS*GGSLTVSLGRATSI
Trigger: AATGGAGGTTGCTCTGCCAAGGCTGACTGTAAGAGAACCACCCCAGGAAGGCGAGTGTGCACGTGCAAAGCAGGCTACACGGGTGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp TTGAACAGGAAGTCCTGTTGTTCAGCAGGTAGGGCATGGAGGGCTTaGTCGGTGGGCCAGAAGAGAGTGACTGGGGTGTGGATGGGATCG +
Preference number: 5 (lower is better)
Translates to: LNRKSCCSAGRAWRA*SVGQKRVTGVWMGS
Trigger: CGATCCCATCCACACCCCAGTCACTCTCTTCTGGCCCACCGACCAAGCCCTCCATGCCCTACCTGCTGAACAACAGGACTTCCTGTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCCATTCAGGGATGGGCTaGTCACACTTGGGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: AKGSEEEAVLGGHSNTSLHSGMG*SHLGPV
Trigger: CACTGGCCCCAAGTGTGACAAGCCCATCCCTGAATG...GAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTTGGGCAGGGCTGGCATaGGGGGCCAAAGAAGCCGGC +
Preference number: 5 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGAWAGLA*GAKEAG
Trigger: GCCGGCTTCTTTGGCCCCCAATGCCAGCCCTGCCCA...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGAGCATCTGGCCACCTTaGCACAGCCCCCGTTGTCCT +
Preference number: 5 (lower is better)
Translates to: QRKKSQRVRGGSCTGWAQSIWPP*HSPRCP
Trigger: AGGACAACGGGGGCTGTGCAAAGGTGGCCAGATGCT...CTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACATGGAGGTCGACACATTaGGCGTCTGCATGGCACTGC +
Preference number: 5 (lower is better)
Translates to: GQRRKLYWVGTATHLSPTWRSTH*ASAWHC
Trigger: GCAGTGCCATGCAGACGCCAAATGTGTCGACCTCCA...TGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTGATGGCCCAGGTGGCAGTGAGTGATGGCTGGCATCTCCCGTCCAGGCCCTCATTCTCAGGCTGCTGCTaGCCAAGAGCTGCAACATTA +
Preference number: 5 (lower is better)
Translates to: LMAQVAVSDGWHLPSRPSFSGCC*PRAATL
Trigger: TAATGTTGCAGCTCTTGGCAAGCAGCAGCCTGAGAA...TGAGGGCCTGGACGGGAGATGCCAGCCATCACTCACTGCCACCTGGGCCATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS TCA 90 bp GCTTATCACAGAGTCTCCCGGCAGAGCCGTCTCTGCATGTGCCAGTaGGGCAGGCCCCATCGCTGTCTATCCTGTTATTGCATGTTCCGT +
Preference number: 5 (lower is better)
Translates to: AYHRVSRQSRLCMCQ*GRPHRCLSCYCMFR
Trigger: ACGGAACATGCAATAACAGGATAGACAGCGATGGGGCCTGCCTCACTGGCACATGCAGAGACGGCTCTGCCGGGAGACTCTGTGATAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp AGGAGCAGGTTCCATTTCCTTCCATGCCTTCAGCACAACTGCCTCTaGCATTGCAGGGTGACCCCGCTCCACCTGGGCACTCTATACAGT +
Preference number: 5 (lower is better)
Translates to: RSRFHFLPCLQHNCL*HCRVTPLHLGTLYS
Trigger: ACTGTATAGAGTGCCCAGGTGGAGCGGGGTCACCCTGCAATGGCAGAGGCAGTTGTGCTGAAGGCATGGAAGGAAATGGAACCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp TTCCACCAAACCCTTCTTGGCAGGAGCAGGTTCCATTTCCTTCCATaGCTTCAGCACAACTGCCTCTGCCATTGCAGGGTGACCCCGCTC +
Preference number: 5 (lower is better)
Translates to: FHQTLLGRSRFHFLP*LQHNCLCHCRVTPL
Trigger: GAGCGGGGTCACCCTGCAATGGCAGAGGCAGTTGTGCTGAAGGCATGGAAGGAAATGGAACCTGCTCCTGCCAAGAAGGGTTTGGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp GACACTGGGAGCCTTGGAAGCCCTCCTCACAAATGCATGTCCCGTTaGCGCCGAGGCTATCTGCACACTGTCCATTTCCTGAGCATGGAT +
Preference number: 5 (lower is better)
Translates to: DTGSLGSPPHKCMSR*RRGYLHTVHFLSMD
Trigger: ATCCATGCTCAGGAAATGGACAGTGTGCAGATAGCCTCGGCGGCAACGGGACATGCATTTGTGAGGAGGGCTTCCAAGGCTCCCAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp CAGAGCAGAACTGACACTGGGAGCCTTGGAAGCCCTCCTCACAAATaGATGTCCCGTTGCCGCCGAGGCTATCTGCACACTGTCCATTTC +
Preference number: 5 (lower is better)
Translates to: QSRTDTGSLGSPPHK*MSRCRRGYLHTVHF
Trigger: GAAATGGACAGTGTGCAGATAGCCTCGGCGGCAACGGGACATGCATTTGTGAGGAGGGCTTCCAAGGCTCCCAGTGTCAGTTCTGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp TTTCCAGGCACACAATGCCATCACCCGTGTAGCCTGCTTTGCACGTaGACACTCGCCTTCCTGGGGTGGTTCTCTTACAGTCAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: FPGTQCHHPCSLLCT*TLAFLGWFSYSQPW
Trigger: CCAAGGCTGACTGTAAGAGAACCACCCCAGGAAGGCGAGTGTGCACGTGCAAAGCAGGCTACACGGGTGATGGCATTGTGTGCCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp CGTAGGCCACACCCAGGTCAAACAAGAGCTCCCGCTGCACAATTCTaGAGGTTTGGCCATTCAGAAAGAGGTCACCGATGTCCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: RRPHPGQTRAPAAQF*RFGHSERGHRCPCQ
Trigger: CTGGCAGGGACATCGGTGACCTCTTTCTGAATGGCCAAACCTGCAGAATTGTGCAGCGGGAGCTCTTGTTTGACCTGGGTGTGGCCTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp GCATGGAGGGCTTGGTCGGTGGGCCAGAAGAGAGTGACTGGGGTGTaGATGGGATCGGTGATGACACTCAGCAAACCTGAGTCCTGTATT +
Preference number: 5 (lower is better)
Translates to: AWRAWSVGQKRVTGV*MGSVMTLSKPESCI
Trigger: AATACAGGACTCAGGTTTGCTGAGTGTCATCACCGATCCCATCCACACCCCAGTCACTCTCTTCTGGCCCACCGACCAAGCCCTCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp TTGTCTTGGTTGAACAGGAAGTCCTGTTGTTCAGCAGGTAGGGCATaGAGGGCTTGGTCGGTGGGCCAGAAGAGAGTGACTGGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: LSWLNRKSCCSAGRA*RAWSVGQKRVTGVW
Trigger: CCACACCCCAGTCACTCTCTTCTGGCCCACCGACCAAGCCCTCCATGCCCTACCTGCTGAACAACAGGACTTCCTGTTCAACCAAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp ACAGTGGTATCCTGGAAGTGGAGGTCGACACATTTGGCGTCTGCATaGCACTGCCCATTGTCCTGTAAGCAGCGGTCAATGGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: TVVSWKWRSTHLASA*HCPLSCKQRSMGSC
Trigger: GCAGCTGCCCATTGACCGCTGCTTACAGGACAATGGGCAGTGCCATGCAGACGCCAAATGTGTCGACCTCCACTTCCAGGATACCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp GGTTGTAGGTTGCCATGGTCGCAGCTTCGTTGGCACAGGCCTCTCTaGCTTTGTCAAAGGTCAGCTTATACTGGCCCAGTGGGGAGCGTA +
Preference number: 5 (lower is better)
Translates to: GCRLPWSQLRWHRPL*LCQRSAYTGPVGSV
Trigger: TACGCTCCCCACTGGGCCAGTATAAGCTGACCTTTGACAAAGCCAGAGAGGCCTGTGCCAACGAAGCTGCGACCATGGCAACCTACAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp GGTACTTGGCCTTCTGGGCATAGGAGAGCTGGTTGTAGGTTGCCATaGTCGCAGCTTCGTTGGCACAGGCCTCTCTGGCTTTGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: GTWPSGHRRAGCRLP*SQLRWHRPLWLCQR
Trigger: CCTTTGACAAAGCCAGAGAGGCCTGTGCCAACGAAGCTGCGACCATGGCAACCTACAACCAGCTCTCCTATGCCCAGAAGGCCAAGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATATCTTCACAGTGGCATaGCAGTACCGGGCACAGCCG +
Preference number: 5 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHIFTVA*QYRAQP
Trigger: CGGCTGTGCCCGGTACTGCAATGCCACTGTGAAGAT...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCCAACTGGCTGTCCCATaGCTGTATTCACAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: AKGSEEEAVLGGHSNTSLQLAVP*LYSQVA
Trigger: CGCCACCTGTGAATACAGCAATGGGACAGCCAGTTG...GAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAATACAAACAGGATGCGTaGTCGTGGCAGCCGCCTGCA +
Preference number: 5 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQYKQDA*SWQPPA
Trigger: TGCAGGCGGCTGCCACGACAACGCATCCTGTTTGTA...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGCTGTGCCCGTCCCCTTaGTATCCCTTCTGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLLCPSP*YPFWQL
Trigger: CAGCTGCCAGAAGGGATACAAAGGGGACGGGCACAG...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGAGCTTCCCAGCCTCGTTaGCAGGGTGGTGCCATTGAC +
Preference number: 5 (lower is better)
Translates to: AQQHISHPQKQPPDQPERASQPR*QGGAID
Trigger: GTCAATGGCACCACCCTGCAAACGAGGCTGGGAAGC...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 90 bp CCATTGAAGCCGGTGTTGCATTTACACTCTCCGGTGGCCGAGTACTaGTCAAGGCAGACACCCCGGTTATTACACGGGGCATCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: PLKPVLHLHSPVAEY*SRQTPRLLHGASGP
Trigger: AGGACCAGATGCCCCGTGTAATAACCGGGGTGTCTGCCTTGATCAGTACTCGGCCACCGGAGAGTGTAAATGCAACACCGGCTTCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp ACACGGGTTGATTTCCAGGCACACAATGCCATCACCCGTGTAGCCTaGTTTGCACGTGCACACTCGCCTTCCTGGGGTGGTTCTCTTACA +
Preference number: 5 (lower is better)
Translates to: TRVDFQAHNAITRVA*FARAHSPSWGGSLT
Trigger: TGTAAGAGAACCACCCCAGGAAGGCGAGTGTGCACGTGCAAAGCAGGCTACACGGGTGATGGCATTGTGTGCCTGGAAATCAACCCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp ATGCCATTACCAAAGCAGACATTCTGGGCATTCCCTGGGCAGGGCTaGCATTGGGGGCCAAAGAAGCCGGCACAGCATTCTCTCGTAATG +
Preference number: 5 (lower is better)
Translates to: MPLPKQTFWAFPGQG*HWGPKKPAQHSLVM
Trigger: CATTACGAGAGAATGCTGTGCCGGCTTCTTTGGCCCCCAATGCCAGCCCTGCCCAGGGAATGCCCAGAATGTCTGCTTTGGTAATGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp ATCCAAACAGATGCCATTACCAAAGCAGACATTCTGGGCATTCCCTaGGCAGGGCTGGCATTGGGGGCCAAAGAAGCCGGCACAGCATTC +
Preference number: 5 (lower is better)
Translates to: IQTDAITKADILGIP*AGLALGAKEAGTAF
Trigger: GAATGCTGTGCCGGCTTCTTTGGCCCCCAATGCCAGCCCTGCCCAGGGAATGCCCAGAATGTCTGCTTTGGTAATGGCATCTGTTTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp CCATTCACTCCATCCAAACAGATGCCATTACCAAAGCAGACATTCTaGGCATTCCCTGGGCAGGGCTGGCATTGGGGGCCAAAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: PFTPSKQMPLPKQTF*AFPGQGWHWGPKKP
Trigger: CGGCTTCTTTGGCCCCCAATGCCAGCCCTGCCCAGGGAATGCCCAGAATGTCTGCTTTGGTAATGGCATCTGTTTGGATGGAGTGAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp CGCCAGCCAACATCACAGTCACAGGAGCCATCTCCCAAGGGTCCTTaGTTGCATCTCCCATGGACACAAGAACATGCTTGGTCACAGTGG +
Preference number: 5 (lower is better)
Translates to: RQPTSQSQEPSPKGP*LHLPWTQEHAWSQW
Trigger: CCACTGTGACCAAGCATGTTCTTGTGTCCATGGGAGATGCAACCAAGGACCCTTGGGAGATGGCTCCTGTGACTGTGATGTTGGCTGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp TCGTTGGCACAGGCCTCTCTGGCTTTGTCAAAGGTCAGCTTATACTaGCCCAGTGGGGAGCGTAGATGGAACACCCCAACAGTGGTATCC +
Preference number: 5 (lower is better)
Translates to: SLAQASLALSKVSLY*PSGERRWNTPTVVS
Trigger: GGATACCACTGTTGGGGTGTTCCATCTACGCTCCCCACTGGGCCAGTATAAGCTGACCTTTGACAAAGCCAGAGAGGCCTGTGCCAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp GGGCATAGGAGAGCTGGTTGTAGGTTGCCATGGTCGCAGCTTCGTTaGCACAGGCCTCTCTGGCTTTGTCAAAGGTCAGCTTATACTGGC +
Preference number: 5 (lower is better)
Translates to: GHRRAGCRLPWSQLR*HRPLWLCQRSAYTG
Trigger: GCCAGTATAAGCTGACCTTTGACAAAGCCAGAGAGGCCTGTGCCAACGAAGCTGCGACCATGGCAACCTACAACCAGCTCTCCTATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTCACAGGCAAGCACACTaGGCCATCCCCACGGTAGCC +
Preference number: 5 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGAHRQAH*AIPTVA
Trigger: GGCTACCGTGGGGATGGCCAAGTGTGCTTGCCTGTG...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAAGTGCCCGTGCCAGTTTaGATGCATTCTGCATTGCGG +
Preference number: 5 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQVPVPV*MHSALR
Trigger: CCGCAATGCAGAATGCATCAAAACTGGCACGGGCAC...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGAGGCAGCAGGCAGTTGTaGATCTCCGAGCAGTCTCTC +
Preference number: 5 (lower is better)
Translates to: AQQHISHPQKQPPDQPERGSRQL*ISEQSL
Trigger: GAGAGACTGCTCGGAGATCAACAACTGCCTGCTGCC...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGGAGTTGGTGAGGCAGTaGGCGCTGGTATGGCATGTC +
Preference number: 5 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLELVRQ*ALVWHV
Trigger: GACATGCCATACCAGCGCCAACTGCCTCACCAACTC...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCGGGCAGCTGGGAGTATaGACACAGCTCCCACACTCC +
Preference number: 5 (lower is better)
Translates to: QGRKITVTHHVGQNGAGAGQLGV*TQLPHS
Trigger: GGAGTGTGGGAGCTGTGTCAATACTCCCAGCTGCCC...GGCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp ACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTATGGTCGCAGCTTCGTaGGCACAGGCCTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: THRNNPQISQRDEVWLLSMVAAS*AQASLA
Trigger: AGCCAGAGAGGCCTGTGCCAACGAAGCTGCGACCAT...ACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAAAGAGCTGGTTGTAGGTaGCCATGGTCGCAGCTTCGT +
Preference number: 5 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQRAGCR*PWSQLR
Trigger: ACGAAGCTGCGACCATGGCAACCTACAACCAGCTCT...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp ACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGGCTGAGAATTCACAGTaGATGGCCCAGGTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: TGWAQQHISHPQKQPPDQAENSQ*MAQVAV
Trigger: CACTGCCACCTGGGCCATCAACTGTGAATTCTCAGC...CTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 90 bp TGGCCCAAGACAAATCATCCCAACTCGGCTGCAGTTTCTTCATCGTaGAGGGGTCGTAGGAAGGTTCTGGGGGAGCTGAGGTTGTGCTCT +
Preference number: 5 (lower is better)
Translates to: WPKTNHPNSAAVSSS*RGRRKVLGELRLCS
Trigger: AGAGCACAACCTCAGCTCCCCCAGAACCTTCCTACGACCCCTTCACGATGAAGAAACTGCAGCCGAGTTGGGATGATTTGTCTTGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS GCA 90 bp CCGATGTCCCTGCCAGCTCCACATTTCACACTCAGCTCTGAACCTTaGAGGGTCTTCCAGGCAGTGGATGTGGGAAGATCCACAGCTAAA +
Preference number: 5 (lower is better)
Translates to: PMSLPAPHFTLSSEP*RVFQAVDVGRSTAK
Trigger: TTTAGCTGTGGATCTTCCCACATCCACTGCCTGGAAGACCCTGCAAGGTTCAGAGCTGAGTGTGAAATGTGGAGCTGGCAGGGACATCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp CTGCTTTGCAAATACAACTGGCTGTCCCATTGCTGTATTCACAGGTaGCGTGGATGTGACAGAACTGCACGTAGGGCCCACAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: LLCKYNWLSHCCIHR*RGCDRTARRAHRLR
Trigger: CCTCAGCCTGTGGGCCCTACGTGCAGTTCTGTCACATCCACGCCACCTGTGAATACAGCAATGGGACAGCCAGTTGTATTTGCAAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp TCCAGAAGCAGCTGGTGGCAGGCGACCACATGGTACCGAAGAACCTaGGGCATTAAACCGTATTTGTCCCAGTCTTTAACCCGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: SRSSWWQATTWYRRT*GIKPYLSQSLTRAS
Trigger: GGAAGCTCGGGTTAAAGACTGGGACAAATACGGTTTAATGCCCCAGGTTCTTCGGTACCATGTGGTCGCCTGCCACCAGCTGCTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp ACACCCAGGTCAAACAAGAGCTCCCGCTGCACAATTCTGCAGGTTTaGCCATTCAGAAAGAGGTCACCGATGTCCCTGCCAGCTCCACAT +
Preference number: 5 (lower is better)
Translates to: TPRSNKSSRCTILQV*PFRKRSPMSLPAPH
Trigger: ATGTGGAGCTGGCAGGGACATCGGTGACCTCTTTCTGAATGGCCAAACCTGCAGAATTGTGCAGCGGGAGCTCTTGTTTGACCTGGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGACTGACACTGGGAGCCTaGGAAGCCCTCCTCACAAAT +
Preference number: 5 (lower is better)
Translates to: AQQHISHPQKQPPDQPERLTLGA*EALLTN
Trigger: ATTTGTGAGGAGGGCTTCCAAGGCTCCCAGTGTCAG...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATTGATGCATTCTGCATaGCGGCTACAGCCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: LYWVGTATHLSPTETTPRLMHSA*RLQPPG
Trigger: TCCAGGAGGCTGTAGCCGCAATGCAGAATGCATCAA...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGACATGTCCTCAGTAGCTaGTTGGGAAGGCACGAGGAC +
Preference number: 5 (lower is better)
Translates to: AQQHISHPQKQPPDQPERHVLSS*LGRHED
Trigger: GTCCTCGTGCCTTCCCAACAAGCTACTGAGGACATG...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGCCATTTGTGGCTGCGTaGTCCCCATCGACAATGGAG +
Preference number: 5 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLPFVAA*SPSTME
Trigger: CTCCATTGTCGATGGGGACAACGCAGCCACAAATGG...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACCATCTGAGTaGGTGAGGCAGTTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEEAVPSE*VRQLAL
Trigger: CAGCGCCAACTGCCTCACCAACTCAGATGGTACAGC...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGGTGCACTCCGCATTCTaGTCACAGCCACCATGGTTC +
Preference number: 5 (lower is better)
Translates to: EYKGRRAKGSEEEAVLGGVHSAF*SQPPWF
Trigger: GAACCATGGTGGCTGTGACAAGAATGCGGAGTGCAC...CCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGGCATGGCACTGCCCATaGTCCTGTAAGCAGCGGTCA +
Preference number: 5 (lower is better)
Translates to: RCQLKSTKEEEPKGQRRKAWHCP*SCKQRS
Trigger: TGACCGCTGCTTACAGGACAATGGGCAGTGCCATGC...CTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACATTCTCAGGCTGCTGCTaGCCAAGAGCTGCAACATTA +
Preference number: 5 (lower is better)
Translates to: GQRRKLYWVGTATHLSPTFSGCC*PRAATL
Trigger: TAATGTTGCAGCTCTTGGCAAGCAGCAGCCTGAGAA...TGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGGGGGAGCTGAGGTaGTGCTCTCATACAAGGGGT +
Preference number: 5 (lower is better)
Translates to: RCQLKSTKEEEPKGQRRKLGELR*CSHTRG
Trigger: ACCCCTTGTATGAGAGCACAACCTCAGCTCCCCCAG...CTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 90 bp TGTAGCCCCGGAAGATGGAATAGTCAGGCATCTGTTCCAGCCGCATaGGCAGGTTTGGTAAGGAGCCAGTTAGACGTCTTTGTGGGACCA +
Preference number: 5 (lower is better)
Translates to: CSPGRWNSQASVPAA*AGLVRSQLDVFVGP
Trigger: TGGTCCCACAAAGACGTCTAACTGGCTCCTTACCAAACCTGCTCATGCGGCTGGAACAGATGCCTGACTATTCCATCTTCCGGGGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp GCCATCCCCACGGTAGCCTTCTTGGCATGTACAACTGTGCCGATTTaGTCCCAGGTACGTACAATGAGCATGAGGGTGGCAGATTTTTCG +
Preference number: 5 (lower is better)
Translates to: AIPTVAFLACTTVPI*SQVRTMSMRVADFS
Trigger: CGAAAAATCTGCCACCCTCATGCTCATTGTACGTACCTGGGACCAAATCGGCACAGTTGTACATGCCAAGAAGGCTACCGTGGGGATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp GCTTTGTCAAAGGTCAGCTTATACTGGCCCAGTGGGGAGCGTAGATaGAACACCCCAACAGTGGTATCCTGGAAGTGGAGGTCGACACAT +
Preference number: 5 (lower is better)
Translates to: ALSKVSLYWPSGERR*NTPTVVSWKWRSTH
Trigger: ATGTGTCGACCTCCACTTCCAGGATACCACTGTTGGGGTGTTCCATCTACGCTCCCCACTGGGCCAGTATAAGCTGACCTTTGACAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp GTGGCTGAAGAAGGTCCCAGGGCATCACCCATCTGTGAATATTCATaGTGTGAGCCAACTCAGCCTGCTGCTCCTTTGCTGTGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: VAEEGPRASPICEYS*CEPTQPAAPLLCLL
Trigger: CAGAAGACACAGCAAAGGAGCAGCAGGCTGAGTTGGCTCACACCATGAATATTCACAGATGGGTGATGCCCTGGGACCTTCTTCAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548073.1
ENST00000548579.1
CDS CCA 90 bp GGTCAGTCAGGTGTTCTAGAAATGCACGGCCTCGAGCTGAGCTGTTaGAATAGGCCAGCACTTCCTGGGGAGAAGAAGGAAGTCATCAGA +
Preference number: 5 (lower is better)
Translates to: GQSGVLEMHGLELSC*NRPALPGEKKEVIR
Trigger: TCTGATGACTTCCTTCTTCTCCCCAGGAAGTGCTGGCCTATTCCAACAGCTCAGCTCGAGGCCGTGCATTTCTAGAACACCTGACTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548073.1
ENST00000548579.1
CDS CCA 90 bp CTGAGCACAGGTGGTACTTGGCCTGCAGGGATACAGACAGGGCCATaGGTCAGCTGCAAGTTCATGTGTTGTGGCATCACTTGGTTAATG +
Preference number: 5 (lower is better)
Translates to: LSTGGTWPAGIQTGP*VSCKFMCCGITWLM
Trigger: CATTAACCAAGTGATGCCACAACACATGAACTTGCAGCTGACCCATGGCCCTGTCTGTATCCCTGCAGGCCAAGTACCACCTGTGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548073.1
CDS-3UTR CAA 90 bp ACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCACTTGACTCCAAGGTaGAGAGCGCAGGATCGGCAC +
Preference number: 5 (lower is better)
Translates to: TGKKDHSYPSCRAEWSRCHLTPR*RAQDRH
Trigger: GTGCCGATCCTGCGCTCTCAACCTTGGAGTCAAGTG...GCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGACCCCATGCACACAGTaGCACACTGATGAACAGCTG +
Preference number: 5 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRTPCTQ*HTDEQL
Trigger: CAGCTGTTCATCAGTGTGCAACTGTGTGCATGGGGT...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp ACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCCCACGGTAGCCTTCTaGGCATGTACAACTGTGCCG +
Preference number: 5 (lower is better)
Translates to: TGKKDHSYPSCRAEWSRCPTVAF*ACTTVP
Trigger: CGGCACAGTTGTACATGCCAAGAAGGCTACCGTGGG...GCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAAATCCTTTCAGTCCCTaGTCTGTAGGTAACAGCACC +
Preference number: 5 (lower is better)
Translates to: GQRRKLYWVGTATHLSPTNPFSP*SVGNST
Trigger: GGTGCTGTTACCTACAGACAAGGGACTGAAAGGATT...TGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGAATGTGCAGAAGCCCATaGGAAGCAATGATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: LYWVGTATHLSPTETTPRMCRSP*EAMMSP
Trigger: AGGGGACATCATTGCTTCCAATGGGCTTCTGCACAT...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp ACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCAAATGCATGTCCCGTaGCCGCCGAGGCTATCTGCA +
Preference number: 5 (lower is better)
Translates to: TGKKDHSYPSCRAEWSRCQMHVP*PPRLSA
Trigger: TGCAGATAGCCTCGGCGGCAACGGGACATGCATTTG...GCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACGATGGCATTGTTGTTaGGAGCAAACACTGTGTAGG +
Preference number: 5 (lower is better)
Translates to: RVRGGSCTGWAQQHISHPRWHCC*EQTLCR
Trigger: CCTACACAGTGTTTGCTCCAAACAACAATGCCATCG...TGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATTCACGATGCATGCCATaGTGCAGGTCATTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: EEPKGQRRKLYWVGTATHSRCMP*CRSFFR
Trigger: CCTGAAGAATGACCTGCACAATGGCATGCATCGTGA...ATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCGACACAAGAACATGCTaGGTCACAGTGGATGCCGTA +
Preference number: 5 (lower is better)
Translates to: KSQRVRGGSCTGWAQQHIDTRTC*VTVDAV
Trigger: TACGGCATCCACTGTGACCAAGCATGTTCTTGTGTC...GATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCCCAAGGGTCCTTGGTaGCATCTCCCATGGACACAA +
Preference number: 5 (lower is better)
Translates to: RCQLKSTKEEEPKGQRRKPKGPW*HLPWTQ
Trigger: TTGTGTCCATGGGAGATGCAACCAAGGACCCTTGGG...CTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGACTCTTACAGTCAGCCTaGGCAGAGCAACCTCCATTG +
Preference number: 5 (lower is better)
Translates to: AQQHISHPQKQPPDQPERLLQSA*AEQPPL
Trigger: CAATGGAGGTTGCTCTGCCAAGGCTGACTGTAAGAG...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCACACGCCGTCCCATaGAAGCCGGTGTTGCATTTA +
Preference number: 5 (lower is better)
Translates to: GRMEQVPAEEYKGRRAKGSHAVP*KPVLHL
Trigger: TAAATGCAACACCGGCTTCAATGGGACGGCGTGTGA...CCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTTTTACACTCACACTaGTGCTTGCCCGGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: RCQLKSTKEEEPKGQRRKLLHSH*CLPGPV
Trigger: GACAGGCCCGGGCAAGCACAAGTGTGAGTGTAAAAG...CTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTGTCCTCAAGGGGTCATaGCCCTCAAGCTGCCGTTCT +
Preference number: 5 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGAVLKGS*PSSCRS
Trigger: AGAACGGCAGCTTGAGGGCAATGACCCCTTGAGGAC...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp GGTGGTACTTGGCCTGCAGGGATACAGACAGGGCCATGGGTCAGCTaGAAGTTCATGTGTTGTGGCATCACTTGGTTAATGTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: GGTWPAGIQTGPWVS*KFMCCGITWLMSDS
Trigger: GGAATCAGACATTAACCAAGTGATGCCACAACACATGAACTTGCAGCTGACCCATGGCCCTGTCTGTATCCCTGCAGGCCAAGTACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548073.1
CDS CCA 90 bp TTGGGTCCTGTCTGTGTGCACTCCGCATTCTTGTCACAGCCACCATaGTTCTCCAAACACGGGTTGATTTCCAGGCACACAATGCCATCA +
Preference number: 5 (lower is better)
Translates to: LGPVCVHSAFLSQPP*FSKHGLISRHTMPS
Trigger: TGATGGCATTGTGTGCCTGGAAATCAACCCGTGTTTGGAGAACCATGGTGGCTGTGACAAGAATGCGGAGTGCACACAGACAGGACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAAGTTTCCAAAGTTAATTaGGCAGGGGTCCACAGGCAA +
Preference number: 5 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQVSKVN*AGVHRQ
Trigger: TTGCCTGTGGACCCCTGCCAAATTAACTTTGGAAAC...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGACCAGACGAAGTAGATaGACAGCTTGCCAATGGATG +
Preference number: 5 (lower is better)
Translates to: QRKKSQRVRGGSCTGWAQTRRSR*TACQWM
Trigger: CATCCATTGGCAAGCTGTCAATCTACTTCGTCTGGT...CTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAATATTCCCATCCACCTTaGCCAAGTGAAGGAAGTTGC +
Preference number: 5 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQYSHPP*PSEGSC
Trigger: GCAACTTCCTTCACTTGGCAAAGGTGGATGGGAATA...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCAGTGGATGCCGTACTaGCCCTCGGTGCAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGQWMPY*PSVQVS
Trigger: CGAGACCTGCACCGAGGGCAAGTACGGCATCCACTG...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCTTCTGTGGTTGCATaGTCACAATGCACTCCTCGC +
Preference number: 5 (lower is better)
Translates to: GRMEQVPAEEYKGRRAKGSSVVA*SQCTPR
Trigger: GCGAGGAGTGCATTGTGACAATGCAACCACAGAAGA...CCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGAAATCCTGCTGCACACTaGCATGAAGCTGTACCATCT +
Preference number: 5 (lower is better)
Translates to: LYWVGTATHLSPTETTPRNPAAH*HEAVPS
Trigger: AGATGGTACAGCTTCATGCAAGTGTGCAGCAGGATT...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGTCTGCTTCACACCCTTaGGTTTACTCCACCTTGGGC +
Preference number: 5 (lower is better)
Translates to: RCQLKSTKEEEPKGQRRKSASHP*VYSTLG
Trigger: GCCCAAGGTGGAGTAAACCAAAGGGTGTGAAGCAGA...CTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGTTACACTCACACGTGTaGTTCTCCTTACAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: QRKKSQRVRGGSCTGWAQLHSHV*FSLQVA
Trigger: TGCCACCTGTAAGGAGAACAACACGTGTGAGTGTAA...CTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 90 bp CCATTGTGCAGGTCATTCTTCAGGAGTTTCTCCTCCAGGACCACATaGTACCGGAGGACGTCCTCCTCTAGAGACAAGACTTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PLCRSFFRSFSSRTT*YRRTSSSRDKTFFS
Trigger: GGAGAAGAAAGTCTTGTCTCTAGAGGAGGACGTCCTCCGGTATCATGTGGTCCTGGAGGAGAAACTCCTGAAGAATGACCTGCACAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp CCCATCCACCTTTGCCAAGTGAAGGAAGTTGCCCTGCAAAGATGTTaGCAACATGTCAGAAGAAGACAGGGTCTGCAGATCTGCCACTCT +
Preference number: 5 (lower is better)
Translates to: PIHLCQVKEVALQRC*QHVRRRQGLQICHS
Trigger: AGAGTGGCAGATCTGCAGACCCTGTCTTCTTCTGACATGTTGGCAACATCTTTGCAGGGCAACTTCCTTCACTTGGCAAAGGTGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAATCCTATCACATCTTCTaGCCTGCCCTGTGGTTTCAG +
Preference number: 5 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEESYHIF*PALWFQ
Trigger: CTGAAACCACAGGGCAGGCAAGAAGATGTGATAGGA...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAAGGACAACACCGAGGTaGGAGATAGTCCTTCCTACA +
Preference number: 5 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEERTTPR*EIVLPT
Trigger: TGTAGGAAGGACTATCTCCAACCTCGGTGTTGTCCT...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCCCAGGCCCATCATATTaGCACACTGTAGACTTTGTA +
Preference number: 5 (lower is better)
Translates to: KSQRVRGGSCTGWAQQHIPGPSY*HTVDFV
Trigger: TACAAAGTCTACAGTGTGCAAATATGATGGGCCTGG...GATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp ACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCGACGGTGGTGCAATTaGCATTCCTATGACACGGGT +
Preference number: 5 (lower is better)
Translates to: TGKKDHSYPSCRAEWSRCRRWCN*HSYDTG
Trigger: ACCCGTGTCATAGGAATGCAAATTGCACCACCGTCG...GCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGAATGTGGGTTCTAACTaGTCCATGGCTCTGTCAAGG +
Preference number: 5 (lower is better)
Translates to: GRMEQVPAEEYKGRRAKGNVGSN*SMALSR
Trigger: CCTTGACAGAGCCATGGACAAGTTAGAACCCACATT...CCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAACCATTGTCGGTGGTGTaGAACTGTATGAGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEEPLSVV*NCMSWL
Trigger: CAACCAGCTCATACAGTTCAACACCACCGACAATGG...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTGCTTTCCTGAGCATGGATTaGAGAAGCCTCCTGGACACT +
Preference number: 5 (lower is better)
Translates to: HRNNPQISQRDEVWLLSAFLSMD*RSLLDT
Trigger: AGTGTCCAGGAGGCTTCTCAAATCCATGCTCAGGAA...AGCACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTGCTTGTGTATCACTCCATTaGTGGCTGCGTTGTCCCCAT +
Preference number: 5 (lower is better)
Translates to: HRNNPQISQRDEVWLLSACVSLH*WLRCPH
Trigger: ATGGGGACAACGCAGCCACAAATGGAGTGATACACA...AGCACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTGTGGGACCAGCACCTaGTTGATGATGTGTATCACT +
Preference number: 5 (lower is better)
Translates to: GRMEQVPAEEYKGRRAKGCGTST*LMMCIT
Trigger: AGTGATACACATCATCAACAAGGTGCTGGTCCCACA...CCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGAGTATGGCATGTCCCATaGCAGTTGTCTTCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: AQQHISHPQKQPPDQPERVWHVP*QLSSVV
Trigger: AACCACAGAAGACAACTGCAATGGGACATGCCATAC...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCCTTGTTGTCTTGGTaGAACAGGAAGTCCTGTTGT +
Preference number: 5 (lower is better)
Translates to: LYWVGTATHLSPTETTPRSLLSW*NRKSCC
Trigger: ACAACAGGACTTCCTGTTCAACCAAGACAACAAGGA...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGTCCTTCAGCTTGTCCTaGTTGTCTTGGTTGAACAGG +
Preference number: 5 (lower is better)
Translates to: LTHRNNPQISQRDEVWLLSFSLS*LSWLNR
Trigger: CCTGTTCAACCAAGACAACAAGGACAAGCTGAAGGA...CAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 90 bp TTTTTGTTACACCGAGGTCCGTATTTATTGGGATCAGAGCAGAACTaGCACTGGGAGCCTTGGAAGCCCTCCTCACAAATGCATGTCCCG +
Preference number: 5 (lower is better)
Translates to: FLLHRGPYLLGSEQN*HWEPWKPSSQMHVP
Trigger: CGGGACATGCATTTGTGAGGAGGGCTTCCAAGGCTCCCAGTGTCAGTTCTGCTCTGATCCCAATAAATACGGACCTCGGTGTAACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp GCTGAGGTTGTGCTCTCATACAAGGGGTTCGAGATATTCTCAGGCTaGTGCTTGCCAAGAGCTGCAACATTAATGTCCTCTTCCGACTCA +
Preference number: 5 (lower is better)
Translates to: AEVVLSYKGFEIFSG*CLPRAATLMSSSDS
Trigger: TGAGTCGGAAGAGGACATTAATGTTGCAGCTCTTGGCAAGCAGCAGCCTGAGAATATCTCGAACCCCTTGTATGAGAGCACAACCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp ATCAATTTCAGGTTTTCCAGAAGCAGCTGGTGGCAGGCGACCACATaGTACCGAAGAACCTGGGGCATTAAACCGTATTTGTCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: INFRFSRSSWWQATT*YRRTWGIKPYLSQS
Trigger: AGACTGGGACAAATACGGTTTAATGCCCCAGGTTCTTCGGTACCATGTGGTCGCCTGCCACCAGCTGCTTCTGGAAAACCTGAAATTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp GGCAGTTGGCGCTGGTATGGCATGTCCCATTGCAGTTGTCTTCTGTaGTTGCTGAAAAAGAGAACCAGTTGCTGTCTTAGCCCTCTTACT +
Preference number: 5 (lower is better)
Translates to: GSWRWYGMSHCSCLL*LLKKRTSCCLSPLT
Trigger: AGTAAGAGGGCTAAGACAGCAACTGGTTCTCTTTTTCAGCAACCACAGAAGACAACTGCAATGGGACATGCCATACCAGCGCCAACTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549798.1
CDS-3UTR CAA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAACTGGGTCCAAATAAGTaGTCGTCAGCACAGGTTTCA +
Preference number: 5 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEELGPNK*SSAQVS
Trigger: TGAAACCTGTGCTGACGACAACTTATTTGGACCCAG...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGATGGGCTTGTCACACTaGGGGCCAGTGTACGCAGAG +
Preference number: 5 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGMGLSH*GPVYAE
Trigger: CTCTGCGTACACTGGCCCCAAGTGTGACAAGCCCAT...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGTTTCGTAAACATGGATaGATGGGGTCGCAGTATTTG +
Preference number: 5 (lower is better)
Translates to: QRKKSQRVRGGSCTGWAQFRKHG*MGSQYL
Trigger: CAAATACTGCGACCCCATCAATCCATGTTTACGAAA...CTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATTGTCCTTATCGCTGTaGAAGATTTCCCCCGACTTT +
Preference number: 5 (lower is better)
Translates to: AQQHISHPQKQPPDQPERLSLSL*KISPDF
Trigger: AAAGTCGGGGGAAATCTTCAACAGCGATAAGGACAA...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp ACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCGCCAGAATCTGTCCATaGTCGGTGGTGTTGAACTGT +
Preference number: 5 (lower is better)
Translates to: TGKKDHSYPSCRAEWSRCARICP*SVVLNC
Trigger: ACAGTTCAACACCACCGACAATGGACAGATTCTGGC...GCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGCCATTGCCACATCATTaGCCAGAATCTGTCCATTGT +
Preference number: 5 (lower is better)
Translates to: GRMEQVPAEEYKGRRAKGPLPHH*PESVHC
Trigger: ACAATGGACAGATTCTGGCAAATGATGTGGCAATGG...CCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTGGGCAGCAGGCAGTaGTTGATCTCCGAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGLGSRQ*LISEQS
Trigger: AGACTGCTCGGAGATCAACAACTGCCTGCTGCCCAG...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGACCAAGCATGAAGTTATaGGTTCACAGTCAATCCCAT +
Preference number: 5 (lower is better)
Translates to: LYWVGTATHLSPTETTPRPSMKL*VHSQSH
Trigger: ATGGGATTGACTGTGAACCAATAACTTCATGCTTGG...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GGTATGGCTTCTGAGTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCGTCCTCAGTAGCTTGTaGGGAAGGCACGAGGACAGT +
Preference number: 5 (lower is better)
Translates to: GMASECLKDFTFLKGNWCVLSSL*GRHEDS
Trigger: ACTGTCCTCGTGCCTTCCCAACAAGCTACTGAGGAC...GCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGTTCTCGATGGCATTGTaGTTTGGAGCAAACACTGTG +
Preference number: 5 (lower is better)
Translates to: SRCQLKSTKEEEPKGQRRFSMAL*FGANTV
Trigger: CACAGTGTTTGCTCCAAACAACAATGCCATCGAGAA...CCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAATTCTCCAAACACGGGTaGATTTCCAGGCACACAATG +
Preference number: 5 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEEFSKHG*ISRHTM
Trigger: CATTGTGTGCCTGGAAATCAACCCGTGTTTGGAGAA...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATTCAGCTTGTCCTTGTaGTCTTGGTTGAACAGGAAG +
Preference number: 5 (lower is better)
Translates to: AQQHISHPQKQPPDQPERFSLSL*SWLNRK
Trigger: CTTCCTGTTCAACCAAGACAACAAGGACAAGCTGAA...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTCAGGCCTCTCTGGCTTaGTCAAAGGTCAGCTTATAC +
Preference number: 5 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGAQASLA*SKVSLY
Trigger: GTATAAGCTGACCTTTGACAAAGCCAGAGAGGCCTG...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp TGGGGTCGCAGTATTTGCCATCGCCTCGGTAATTGGGAAGGCATTTaGATTCCAGTTTGTTTTCATCTTCAGTGGAAGGCGAACATCTGG +
Preference number: 5 (lower is better)
Translates to: WGRSICHRLGNWEGI*IPVCFHLQWKANIW
Trigger: CCAGATGTTCGCCTTCCACTGAAGATGAAAACAAACTGGAATGCAAATGCCTTCCCAATTACCGAGGCGATGGCAAATACTGCGACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp TGGGACCAGCACCTTGTTGATGATGTGTATCACTCCATTTGTGGCTaGGTTGTCCCCATCGACAATGGAGGCCCCTTCAATTGTGATATT +
Preference number: 5 (lower is better)
Translates to: WDQHLVDDVYHSICG*VVPIDNGGPFNCDI
Trigger: AATATCACAATTGAAGGGGCCTCCATTGTCGATGGGGACAACGCAGCCACAAATGGAGTGATACACATCATCAACAAGGTGCTGGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp ACACAAGTGCCCAGTTTCATCTCTCTCTTTGTTTCATCACATCGATaGGGCAGAATCGGGACAATGGAGGGAGGAATGAGAACTCCTGTC +
Preference number: 5 (lower is better)
Translates to: TQVPSFISLFVSSHR*GRIGTMEGGMRTPV
Trigger: GACAGGAGTTCTCATTCCTCCCTCCATTGTCCCGATTCTGCCCCATCGATGTGATGAAACAAAGAGAGAGATGAAACTGGGCACTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp GAAGCCGGCACAGCATTCTCTCGTAATGACGGTTCTCACACATTTTaGCTGGCACCCAATAAACAGGGTTCGTCTTCCCATGAAATAGGA +
Preference number: 5 (lower is better)
Translates to: EAGTAFSRNDGSHTF*LAPNKQGSSSHEIG
Trigger: TCCTATTTCATGGGAAGACGAACCCTGTTTATTGGGTGCCAGCCAAAATGTGTGAGAACCGTCATTACGAGAGAATGCTGTGCCGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp CTTCATAATCCAGGTTACACTCACACGTGTTGTTCTCCTTACAGGTaGCATGAGCAGAACAAGGAGGCGTACACACTGCAGGCAAAACTG +
Preference number: 5 (lower is better)
Translates to: LHNPGYTHTCCSPYR*HEQNKEAYTLQAKL
Trigger: CAGTTTTGCCTGCAGTGTGTACGCCTCCTTGTTCTGCTCATGCCACCTGTAAGGAGAACAACACGTGTGAGTGTAACCTGGATTATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GGTATGGCTTCTGAGTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTCCACCAAACCCTTCTaGGCAGGAGCAGGTTCCATT +
Preference number: 5 (lower is better)
Translates to: GMASECLKDFTFLKGNWCSTKPF*AGAGSI
Trigger: AATGGAACCTGCTCCTGCCAAGAAGGGTTTGGTGGA...GCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCCATCTAGTCCACTGTaGCACACCCCATGCACACAG +
Preference number: 5 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGPSSPL*HTPCTQ
Trigger: CTGTGTGCATGGGGTGTGCAACAGTGGACTAGATGG...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACATTTGCATTCCAGTTaGTTTTCATCTTCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: RVRGGSCTGWAQQHISHPHLHSS*FSSSVE
Trigger: TTCCACTGAAGATGAAAACAAACTGGAATGCAAATG...TGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAAAAGGCATGTCCCAAATaGGTTTCCTCTAACAAAGAT +
Preference number: 5 (lower is better)
Translates to: RKKSQRVRGGSCTGWAQQKACPK*VSSNKD
Trigger: ATCTTTGTTAGAGGAAACCAATTTGGGACATGCCTT...TTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGGTTTCATCTCTCTCTTaGTTTCATCACATCGATGGG +
Preference number: 5 (lower is better)
Translates to: EYKGRRAKGSEEEAVLGGVSSLS*FHHIDG
Trigger: CCCATCGATGTGATGAAACAAAGAGAGAGATGAAAC...CCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp ACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCACGCACAGGCATTTTTaGTTACACCGAGGTCCGTAT +
Preference number: 5 (lower is better)
Translates to: TGKKDHSYPSCRAEWSRCTHRHF*LHRGPY
Trigger: ATACGGACCTCGGTGTAACAAAAAATGCCTGTGCGT...GCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CAGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAATTAGGGCTGGAATATaGCTCTGTGACAACCAGAAG +
Preference number: 5 (lower is better)
Translates to: QVPAEEYKGRRAKGSEEEIRAGI*LCDNQK
Trigger: CTTCTGGTTGTCACAGAGCAATATTCCAGCCCTAAT...TTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACACATTGGTGTAGTTTATaGGAGCCTCATTTACATAGA +
Preference number: 5 (lower is better)
Translates to: GQRRKLYWVGTATHLSPTHWCSL*EPHLHR
Trigger: TCTATGTAAATGAGGCTCCAATAAACTACACCAATG...TGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGATCTCCCAAGGGTCCTaGGTTGCATCTCCCATGGAC +
Preference number: 5 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGISQGS*VASPMD
Trigger: GTCCATGGGAGATGCAACCAAGGACCCTTGGGAGAT...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp ACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGTTAGTTAAGCAGACATaGATGAGTGTGCAGACCTTT +
Preference number: 5 (lower is better)
Translates to: TGWAQQHISHPQKQPPDQLVKQT*MSVQTF
Trigger: AAAGGTCTGCACACTCATCAATGTCTGCTTAACTAA...CTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTGCTCATCTCCAATGTAGTTaGGCTTGCAAGTACAAGTCC +
Preference number: 5 (lower is better)
Translates to: HRNNPQISQRDEVWLLSAHLQCS*ACKYKS
Trigger: GGACTTGTACTTGCAAGCCAAACTACATTGGAGATG...AGCACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp ACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTGGCATTAAACCGTATTaGTCCCAGTCTTTAACCCGA +
Preference number: 5 (lower is better)
Translates to: THRNNPQISQRDEVWLLSGIKPY*SQSLTR
Trigger: TCGGGTTAAAGACTGGGACAAATACGGTTTAATGCC...ACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp ACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCCTTGTCCTTGTTGTCTaGGTTGAACAGGAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: TGKKDHSYPSCRAEWSRCLVLVV*VEQEVL
Trigger: CAGGACTTCCTGTTCAACCAAGACAACAAGGACAAG...GCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CTGTACTGGGTGGGCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATTCCATAAACCTTTATaGTGCACAGTTCCTGTGTCA +
Preference number: 5 (lower is better)
Translates to: LYWVGTATHLSPTETTPRFHKPL*CTVPVS
Trigger: TGACACAGGAACTGTGCACAATAAAGGTTTATGGAA...TCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGCCCACCCAGTACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 90 bp CATTCAGTTCGGCCTGGTGCGACGGTGGTGCAATTTGCATTCCTATaGCACGGGTTATCTGATTTACATATATCAGTCATACTGCACCCC +
Preference number: 5 (lower is better)
Translates to: HSVRPGATVVQFAFL*HGLSDLHISVILHP
Trigger: GGGGTGCAGTATGACTGATATATGTAAATCAGATAACCCGTGTCATAGGAATGCAAATTGCACCACCGTCGCACCAGGCCGAACTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 90 bp GGCGCTGGTATGGCATGTCCCATTGCAGTTGTCTTCTGTGGTTGCTaGAAAAGAGAACCAGTTGCTGTCTTAGCCCTCTTACTAAATCTC +
Preference number: 5 (lower is better)
Translates to: GAGMACPIAVVFCGC*KREPVAVLALLLNL
Trigger: GAGATTTAGTAAGAGGGCTAAGACAGCAACTGGTTCTCTTTTTCAGCAACCACAGAAGACAACTGCAATGGGACATGCCATACCAGCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549798.1
CDS GCA 90 bp ATACAAGGGGTTCGAGATATTCTCAGGCTGCTGCTTGCCAAGAGCTaGAACATTAATGTCCTCTTCCGACTCAAAATGCTGGAAGCCGAT +
Preference number: 5 (lower is better)
Translates to: IQGVRDILRLLLAKS*NINVLFRLKMLEAD
Trigger: ATCGGCTTCCAGCATTTTGAGTCGGAAGAGGACATTAATGTTGCAGCTCTTGGCAAGCAGCAGCCTGAGAATATCTCGAACCCCTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp GAGGTTGTGCTCTCATACAAGGGGTTCGAGATATTCTCAGGCTGCTaGTTGCCAAGAGCTGCAACATTAATGTCCTCTTCCGACTCAAAA +
Preference number: 5 (lower is better)
Translates to: EVVLSYKGFEIFSGC*LPRAATLMSSSDSK
Trigger: TTTTGAGTCGGAAGAGGACATTAATGTTGCAGCTCTTGGCAAGCAGCAGCCTGAGAATATCTCGAACCCCTTGTATGAGAGCACAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp CAGTTTGTTTTCATCTTCAGTGGAAGGCGAACATCTGGAATTTTCTaGGCAGAGCAAGGCTGCACATTCAGGGATGGGCTTGTCACACTT +
Preference number: 5 (lower is better)
Translates to: QFVFIFSGRRTSGIF*AEQGCTFRDGLVTL
Trigger: AAGTGTGACAAGCCCATCCCTGAATGTGCAGCCTTGCTCTGCCCAGAAAATTCCAGATGTTCGCCTTCCACTGAAGATGAAAACAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp CTGATAAATGCTGCCGCGGCAGGTAAATCCATCTCCAATGTAGTTTaGCTTGCAAGTACAAGTCCTTTCTACTTGCCCAGTGTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: LINAAAAGKSISNVV*LASTSPFYLPSVVA
Trigger: TGCAACCACACTGGGCAAGTAGAAAGGACTTGTACTTGCAAGCCAAACTACATTGGAGATGGATTTACCTGCCGCGGCAGCATTTATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GCACAGCAACACATCTCTCACCCACAGAAACAACCCCCAGATCAGCCAGAGAGAATTATGGTTTGCTCATaGTTGCTCTCAAATGTGGGT +
Preference number: 5 (lower is better)
Translates to: AQQHISHPQKQPPDQPERIMVCS*LLSNVG
Trigger: ACCCACATTTGAGAGCAACAATGAGCAAACCATAAT...TCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGTGAGAGATGTGTTGCTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTAGTTGTCTTCTGTGGTaGCATTGTCACAATGCACTC +
Preference number: 5 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGASCLLW*HCHNAL
Trigger: GAGTGCATTGTGACAATGCAACCACAGAAGACAACT...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp ACCCACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTAGAATTCTTCCAGAGTaGTCTTTGGGAGTGATAAGC +
Preference number: 5 (lower is better)
Translates to: THRNNPQISQRDEVWLLSRILPE*SLGVIS
Trigger: GCTTATCACTCCCAAAGACAACTCTGGAAGAATTCT...ACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AAGAGCCAAAGGGTCAGAGGAGGAAGCTGTACTGGGTGGGCACAGCAACACATCCAAAGTCGTAAGATTTaGCAGAATTCTTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: KSQRVRGGSCTGWAQQHIQSRKI*QNSSRV
Trigger: AACTCTGGAAGAATTCTGCAAAATCTTACGACTTTG...GATGTGTTGCTGTGCCCACCCAGTACAGCTTCCTCCTCTGACCCTTTGGCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGTTTGCACAGCCCCCGTaGTCCTGTTTGCAGAAATCC +
Preference number: 5 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGFAQPP*SCLQKS
Trigger: GGATTTCTGCAAACAGGACAACGGGGGCTGTGCAAA...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 90 bp TGGTGCGACGGTGGTGCAATTTGCATTCCTATGACACGGGTTATCTaGTTTACATATATCAGTCATACTGCACCCCACTCCAGGTACGAA +
Preference number: 5 (lower is better)
Translates to: WCDGGAICIPMTRVI*FTYISHTAPHSRYE
Trigger: TTCGTACCTGGAGTGGGGTGCAGTATGACTGATATATGTAAATCAGATAACCCGTGTCATAGGAATGCAAATTGCACCACCGTCGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 90 bp CATGAAACTTCAAATACTCCTTCAGCTTGTCCTTGTTGTCTTGGTTaGACAGGAAGTCCTGTTGTTCAGCAGGTAGGGCATGGAGGGCTT +
Preference number: 5 (lower is better)
Translates to: HETSNTPSACPCCLG*TGSPVVQQVGHGGL
Trigger: AAGCCCTCCATGCCCTACCTGCTGAACAACAGGACTTCCTGTTCAACCAAGACAACAAGGACAAGCTGAAGGAGTATTTGAAGTTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp TTGCCCTGCAAAGATGTTGCCAACATGTCAGAAGAAGACAGGGTCTaGAGATCTGCCACTCTGTATGTGCCTAGTAGCATATGGTACTTT +
Preference number: 5 (lower is better)
Translates to: LPCKDVANMSEEDRV*RSATLYVPSSIWYF
Trigger: AAAGTACCATATGCTACTAGGCACATACAGAGTGGCAGATCTGCAGACCCTGTCTTCTTCTGACATGTTGGCAACATCTTTGCAGGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp ATTTGCATTCCAGTTTGTTTTCATCTTCAGTGGAAGGCGAACATCTaGAATTTTCTGGGCAGAGCAAGGCTGCACATTCAGGGATGGGCT +
Preference number: 5 (lower is better)
Translates to: ICIPVCFHLQWKANI*NFLGRARLHIQGWA
Trigger: AGCCCATCCCTGAATGTGCAGCCTTGCTCTGCCCAGAAAATTCCAGATGTTCGCCTTCCACTGAAGATGAAAACAAACTGGAATGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp GGTAATTGGGAAGGCATTTGCATTCCAGTTTGTTTTCATCTTCAGTaGAAGGCGAACATCTGGAATTTTCTGGGCAGAGCAAGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: GNWEGICIPVCFHLQ*KANIWNFLGRARLH
Trigger: GTGCAGCCTTGCTCTGCCCAGAAAATTCCAGATGTTCGCCTTCCACTGAAGATGAAAACAAACTGGAATGCAAATGCCTTCCCAATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 90 bp CGTAACCTTTCTGGCAAATGCATTCAGTTCGGCCTGGTGCGACGGTaGTGCAATTTGCATTCCTATGACACGGGTTATCTGATTTACATA +
Preference number: 5 (lower is better)
Translates to: RNLSGKCIQFGLVRR*CNLHSYDTGYLIYI
Trigger: TATGTAAATCAGATAACCCGTGTCATAGGAATGCAAATTGCACCACCGTCGCACCAGGCCGAACTGAATGCATTTGCCAGAAAGGTTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GGTATGGCTTCTGAGTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTACAACTGTGCCGATTaGGTCCCAGGTACGTACAAT +
Preference number: 5 (lower is better)
Translates to: GMASECLKDFTFLKGNWCYNCAD*VPGTYN
Trigger: ATTGTACGTACCTGGGACCAAATCGGCACAGTTGTA...GCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp ACAGGGAAGAAAGATCACAGTTACCCATCATGTAGGGCAGAATGGAGCAGGTGCAACAAAGATCTGAACTaGCTGTACCTTGGTTGTAGC +
Preference number: 5 (lower is better)
Translates to: TGKKDHSYPSCRAEWSRCNKDLN*LYLGCS
Trigger: GCTACAACCAAGGTACAGCAAGTTCAGATCTTTGTT...GCACCTGCTCCATTCTGCCCTACATGATGGGTAACTGTGATCTTTCTTCCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGTCCTTCATAGCCCTCTaGACAAACACAGCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGSFIAL*TNTAPD
Trigger: GTCTGGAGCTGTGTTTGTCAAGAGGGCTATGAAGGA...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTGTTTCTGTTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGGGGACCAGCACCTTGTaGATGATGTGTATCACTCCA +
Preference number: 5 (lower is better)
Translates to: LFLFHKPLLCTVPVSGTGGTSTL*MMCITP
Trigger: TGGAGTGATACACATCATCAACAAGGTGCTGGTCCC...CCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAACAGAAACAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GGTATGGCTTCTGAGTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCACAAGTCCTTTCTACTaGCCCAGTGTGGTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: GMASECLKDFTFLKGNWCTSPFY*PSVVAD
Trigger: ATCTGCAACCACACTGGGCAAGTAGAAAGGACTTGT...GCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GGTATGGCTTCTGAGTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCCACAATTCTGCAGGTTaGGCCATTCAGAAAGAGGTC +
Preference number: 5 (lower is better)
Translates to: GMASECLKDFTFLKGNWCHNSAG*AIQKEV
Trigger: GACCTCTTTCTGAATGGCCAAACCTGCAGAATTGTG...GCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGAGAATTCACAGTCCATTGAAGCCGGTGTaGCATTTACACTCTCCGGTG +
Preference number: 5 (lower is better)
Translates to: VLKGLYVPKRQLVLRIHSPLKPV*HLHSPV
Trigger: CACCGGAGAGTGTAAATGCAACACCGGCTTCAATGG...ACTGTGAATTCTCAGCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGAGAATTCACAGTCCCCCGTTGTCCTGTTaGCAGAAATCCACAACTGTG +
Preference number: 5 (lower is better)
Translates to: VLKGLYVPKRQLVLRIHSPPLSC*QKSTTV
Trigger: CACAGTTGTGGATTTCTGCAAACAGGACAACGGGGG...ACTGTGAATTCTCAGCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp ATTGTTGTTTGGAGCAAACACTGTGTAGGCATCGGCAGCCTCAATTaGATTCGCCAGATTATATTGAATGATGTAGCCCCGGAAGATGGA +
Preference number: 5 (lower is better)
Translates to: IVVWSKHCVGIGSLN*IRQIILNDVAPEDG
Trigger: TCCATCTTCCGGGGCTACATCATTCAATATAATCTGGCGAATGCAATTGAGGCTGCCGATGCCTACACAGTGTTTGCTCCAAACAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CACAGAAACAACCCCCAGATCAGCCAGAGAGATGAGGTATGGCTTCTGAGTGCTATTTTTACCTTCTTTTaGCCTCCATGGAGTTTAAGC +
Preference number: 5 (lower is better)
Translates to: HRNNPQISQRDEVWLLSAIFTFF*PPWSLS
Trigger: GCTTAAACTCCATGGAGGCAAAAAGAAGGTAAAAAT...AGCACTCAGAAGCCATACCTCATCTCTCTGGCTGATCTGGGGGTTGTTTCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp CCATCATGTAGGGCAGAATGGAGCAGGTGCCAGCTGAAGAGTACAAAGGAAGAAACCTTGGTTGTAGCATaGTCATTATGGTTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: PSCRAEWSRCQLKSTKEETLVVA*SLWFAH
Trigger: ATGAGCAAACCATAATGACAATGCTACAACCAAGGT...TTCTTCCTTTGTACTCTTCAGCTGGCACCTGCTCCATTCTGCCCTACATGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp AGGTGCCAGCTGAAGAGTACAAAGGAAGAAGAGCCAAAGGGTCAGAGGAGGAAGATGATCTTAGCCTTATaGTTTATATACACCGTGCTC +
Preference number: 5 (lower is better)
Translates to: RCQLKSTKEEEPKGQRRKMILAL*FIYTVL
Trigger: GAGCACGGTGTATATAAACAATAAGGCTAAGATCAT...CTTCCTCCTCTGACCCTTTGGCTCTTCTTCCTTTGTACTCTTCAGCTGGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGAGAATTCACAGTAAAAACATGCTGACATaGGCGAGGTGGTGCTCGATG +
Preference number: 5 (lower is better)
Translates to: VLKGLYVPKRQLVLRIHSKNMLT*ARWCSM
Trigger: CATCGAGCACCACCTCGCCAATGTCAGCATGTTTTT...ACTGTGAATTCTCAGCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp AACCTTTCTGGCAAATGCATTCAGTTCGGCCTGGTGCGACGGTGGTaGAATTTGCATTCCTATGACACGGGTTATCTGATTTACATATAT +
Preference number: 5 (lower is better)
Translates to: NLSGKCIQFGLVRRW*NLHSYDTGYLIYIY
Trigger: ATATATGTAAATCAGATAACCCGTGTCATAGGAATGCAAATTGCACCACCGTCGCACCAGGCCGAACTGAATGCATTTGCCAGAAAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTCCATAAACCTTTATTGTGCACAGTTCCTGTGTCAGGCACTGGGCTAGGGGCTAAAAGCTCATTTACATaGAATCCTTTCAGTCCCTTG +
Preference number: 5 (lower is better)
Translates to: FHKPLLCTVPVSGTGLGAKSSFT*NPFSPL
Trigger: CAAGGGACTGAAAGGATTCAATGTAAATGAGCTTTT...AGCCCCTAGCCCAGTGCCTGACACAGGAACTGTGCACAATAAAGGTTTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GGTATGGCTTCTGAGTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCATGGTTTGCTCATTGTaGCTCTCAAATGTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: GMASECLKDFTFLKGNWCMVCSL*LSNVGS
Trigger: AGAACCCACATTTGAGAGCAACAATGAGCAAACCAT...GCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCACTCAGAAGCCATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGAGAATTCACAGTAATGCTGGAAGCCGATaGTTCTCCGGTTTATCCGAA +
Preference number: 5 (lower is better)
Translates to: VLKGLYVPKRQLVLRIHSNAGSR*FSGLSE
Trigger: TTCGGATAAACCGGAGAACAATCGGCTTCCAGCATT...ACTGTGAATTCTCAGCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp CTCTCAAATGTGGGTTCTAACTTGTCCATGGCTCTGTCAAGGATGTaGAGAAGCCCATTGGAAGCAATGATGTCCCCTTGTATAATTTTT +
Preference number: 5 (lower is better)
Translates to: LSNVGSNLSMALSRM*RSPLEAMMSPCIIF
Trigger: AAAAATTATACAAGGGGACATCATTGCTTCCAATGGGCTTCTGCACATCCTTGACAGAGCCATGGACAAGTTAGAACCCACATTTGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp CCAGAAGCTTCCGAGATCCCTCTGGAGAAAGGAGGTAATCGAGAGTaGCGTCCTTCATGTTATTCAATGCTTCATTATTTGGAACAAAAA +
Preference number: 5 (lower is better)
Translates to: PEASEIPLEKGGNRE*RPSCYSMLHYLEQK
Trigger: TTTTTGTTCCAAATAATGAAGCATTGAATAACATGAAGGACGGCACTCTCGATTACCTCCTTTCTCCAGAGGGATCTCGGAAGCTTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp GTGCTTAAAGGACTTTACGTTCCTAAAAGGCAACTGGTGCTGAGAATTCACAGTCATCGGCAGCCTCAATaGCATTCGCCAGATTATATT +
Preference number: 5 (lower is better)
Translates to: VLKGLYVPKRQLVLRIHSHRQPQ*HSPDYI
Trigger: AATATAATCTGGCGAATGCAATTGAGGCTGCCGATG...ACTGTGAATTCTCAGCACCAGTTGCCTTTTAGGAACGTAAAGTCCTTTAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 90 bp TTGACAGCTTGCCAATGGATGACATTTCCCGGTTTGTTCCAAGCATaGAGTTATTGGTTCACAGTCAATCCCATTTCCTCGAAATCCTTT +
Preference number: 5 (lower is better)
Translates to: LTACQWMTFPGLFQA*SYWFTVNPISSKSF
Trigger: AAAGGATTTCGAGGAAATGGGATTGACTGTGAACCAATAACTTCATGCTTGGAACAAACCGGGAAATGTCATCCATTGGCAAGCTGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 90 bp CATTCCTATGACACGGGTTATCTGATTTACATATATCAGTCATACTaGACCCCACTCCAGGTACGAAATTCTGGTAATGCTCCTTACACT +
Preference number: 5 (lower is better)
Translates to: HSYDTGYLIYIYQSY*TPLQVRNSGNAPYT
Trigger: AGTGTAAGGAGCATTACCAGAATTTCGTACCTGGAGTGGGGTGCAGTATGACTGATATATGTAAATCAGATAACCCGTGTCATAGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS-3UTR CAA 90 bp TTTTGGATATGGAATCTCTCTTCTCTGACAAGATTTCTTGCTGCGGTCCTCAACAGGCTGGATATGGTTTaGGATATGGAATCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: FWIWNLSSLTRFLAAVLNRLDMV*DMESLF
Trigger: GAAGAGAGATTCCATATCCAAAACCATATCCAGCCT...GTTGAGGACCGCAGCAAGAAATCTTGTCAGAGAAGAGAGATTCCATATCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549474.1
CDS GCA 72 bp CACGAGGGGCCTGTCCACCCCGTTTCACAGAGGCACTaGCCGGAGCCCGTGATGCCATCATCGCACTGTCCG +
Preference number: 6 (lower is better)
Translates to: HEGPVHPVSQRH*PEPVMPSSHCP
Trigger: CGGACAGTGCGATGATGGCATCACGGGCTCCGGGCAGTGCCTCTGTGAAACGGGGTGGACAGGCCCCTCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp GGGGTAGGCAACCCGCCCGGTCTCCAGCCAGCCTGCTaGGCACAGGTGGTACTTGGCCTGCAGGGATACAGA +
Preference number: 6 (lower is better)
Translates to: GVGNPPGLQPAC*AQVVLGLQGYR
Trigger: TCTGTATCCCTGCAGGCCAAGTACCACCTGTGCTCAGCAGGCTGGCTGGAGACCGGGCGGGTTGCCTACCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548073.1
CDS CCA 72 bp CCTGACAGTCTCGCCCGAAGTAGCCCTTGCAGCACCTaGGGATCTGTATCACCAGGCTGCACCGCTCCCGGC +
Preference number: 6 (lower is better)
Translates to: PDSLARSSPCST*GSVSPGCTAPG
Trigger: GCCGGGAGCGGTGCAGCCTGGTGATACAGATCCCCAGGTGCTGCAAGGGCTACTTCGGGCGAGACTGTCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp TCCACCCCGTTTCACAGAGGCACTGCCCGGAGCCCGTaGTGCCATCATCGCACTGTCCGTGGTCTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: STPFHRGTARSP*CHHRTVRGLSS
Trigger: GCTGCTCAGACCACGGACAGTGCGATGATGGCATCACGGGCTCCGGGCAGTGCCTCTGTGAAACGGGGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp CAGGGCAGGCCTGACAGTCTCGCCCGAAGTAGCCCTTaGAGCACCTGGGGATCTGTATCACCAGGCTGCACC +
Preference number: 6 (lower is better)
Translates to: QGRPDSLARSSP*STWGSVSPGCT
Trigger: GGTGCAGCCTGGTGATACAGATCCCCAGGTGCTGCAAGGGCTACTTCGGGCGAGACTGTCAGGCCTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp GGTGGCGTGCTCGTGACACCCTCCGTTAAGGCCGTCTaGACAGGGGTCTATCTCTGTGCAGCTGTGCCCGTC +
Preference number: 6 (lower is better)
Translates to: GGVLVTPSVKAV*TGVYLCAAVPV
Trigger: GACGGGCACAGCTGCACAGAGATAGACCCCTGTGCAGACGGCCTTAACGGAGGGTGTCACGAGCACGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp GCAACCCGCCCGGTCTCCAGCCAGCCTGCTGAGCACAGGTGGTACTaGGCCTGCAGGGATACAGACAGGGCCATGGGTCAGCTGCAAGTT +
Preference number: 6 (lower is better)
Translates to: ATRPVSSQPAEHRWY*ACRDTDRAMGQLQV
Trigger: AACTTGCAGCTGACCCATGGCCCTGTCTGTATCCCTGCAGGCCAAGTACCACCTGTGCTCAGCAGGCTGGCTGGAGACCGGGCGGGTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548073.1
CDS TCA 72 bp TTGCCCGGGCCTGTCATCTTACAGGTGGCGTGCTCGTaGCACCCTCCGTTAAGGCCGTCTGCACAGGGGTCT +
Preference number: 6 (lower is better)
Translates to: LPGPVILQVACS*HPPLRPSAQGS
Trigger: AGACCCCTGTGCAGACGGCCTTAACGGAGGGTGTCACGAGCACGCCACCTGTAAGATGACAGGCCCGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp TCATTCTGCCCGGGACCCACATACAAACAGGATGCGTaGTCGTGGCAGCCGCCTGCACTGGGCAGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: SFCPGPTYKQDA*SWQPPALGSRQ
Trigger: CTGCCTGCTGCCCAGTGCAGGCGGCTGCCACGACAACGCATCCTGTTTGTATGTGGGTCCCGGGCAGAATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp CTCCCATGGACACAAGAACATGCTTGGTCACAGTGGATGCCGTACTaGCCCTCGGTGCAGGTCTCGCAGGCTGTGCCGCTGAAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: LPWTQEHAWSQWMPY*PSVQVSQAVPLKPS
Trigger: GGAGGGCTTCAGCGGCACAGCCTGCGAGACCTGCACCGAGGGCAAGTACGGCATCCACTGTGACCAAGCATGTTCTTGTGTCCATGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp CCGTCTGCACAGGGGTCTATCTCTGTGCAGCTGTGCCCGTCCCCTTaGTATCCCTTCTGGCAGCTGCAGGAGACCTTCGTGCCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: PSAQGSISVQLCPSP*YPFWQLQETFVPFW
Trigger: CCAGAAGGGCACGAAGGTCTCCTGCAGCTGCCAGAAGGGATACAAAGGGGACGGGCACAGCTGCACAGAGATAGACCCCTGTGCAGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp ATCTCCCCGGCCAGCACATCTCACACGCCGTCCCATTaGAGCCGGTGTTGCATTTACACTCTCCGGTGGCCG +
Preference number: 6 (lower is better)
Translates to: ISPASTSHTPSH*SRCCIYTLRWP
Trigger: CGGCCACCGGAGAGTGTAAATGCAACACCGGCTTCAATGGGACGGCGTGTGAGATGTGCTGGCCGGGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp GGAGCCCGTGATGCCATCATCGCACTGTCCGTGGTCTaGGCAGCCACAGGGCAGACAATCAGGCCCGAATCT +
Preference number: 6 (lower is better)
Translates to: GARDAIIALSVV*AATGQTIRPES
Trigger: AGATTCGGGCCTGATTGTCTGCCCTGTGGCTGCTCAGACCACGGACAGTGCGATGATGGCATCACGGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp ACACTCATTCTGCCCGGGACCCACATACAAACAGGATaGGTTGTCGTGGCAGCCGCCTGCACTGGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: TLILPGTHIQTG*VVVAAACTGQQ
Trigger: CTGCTGCCCAGTGCAGGCGGCTGCCACGACAACGCATCCTGTTTGTATGTGGGTCCCGGGCAGAATGAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp AGCTGTGCCCGTCCCCTTTGTATCCCTTCTGGCAGCTaGAGGAGACCTTCGTGCCCTTCTGGGAGCATCTGG +
Preference number: 6 (lower is better)
Translates to: SCARPLCIPSGS*RRPSCPSGSIW
Trigger: CCAGATGCTCCCAGAAGGGCACGAAGGTCTCCTGCAGCTGCCAGAAGGGATACAAAGGGGACGGGCACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp AGCCCCAGTCACCAGGATGATGGCAAAGAAGATCCCTaGTCCCAAGCCAGTGTGGGTCAAGGTCACGGGGGC +
Preference number: 6 (lower is better)
Translates to: SPSHQDDGKEDP*SQASVGQGHGG
Trigger: GCCCCCGTGACCTTGACCCACACTGGCTTGGGAGCAGGGATCTTCTTTGCCATCATCCTGGTGACTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp ATCAAGGCAGACACCCCGGTTATTACACGGGGCATCTaGTCCTCCAGGGCAGGCCTGACAGTCTCGCCCGAA +
Preference number: 6 (lower is better)
Translates to: IKADTPVITRGI*SSRAGLTVSPE
Trigger: TTCGGGCGAGACTGTCAGGCCTGCCCTGGAGGACCAGATGCCCCGTGTAATAACCGGGGTGTCTGCCTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp TCGTGGCAGCCGCCTGCACTGGGCAGCAGGCAGTTGTaGATCTCCGAGCAGTCTCTCCCATTCCCTGTCCAA +
Preference number: 6 (lower is better)
Translates to: SWQPPALGSRQL*ISEQSLPFPVQ
Trigger: TTGGACAGGGAATGGGAGAGACTGCTCGGAGATCAACAACTGCCTGCTGCCCAGTGCAGGCGGCTGCCACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp TTGTCGTGGCAGCCGCCTGCACTGGGCAGCAGGCAGTaGTTGATCTCCGAGCAGTCTCTCCCATTCCCTGTC +
Preference number: 6 (lower is better)
Translates to: LSWQPPALGSRQ*LISEQSLPFPV
Trigger: GACAGGGAATGGGAGAGACTGCTCGGAGATCAACAACTGCCTGCTGCCCAGTGCAGGCGGCTGCCACGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp GTCTCCGTCGGTTGGAGTGGGTCCTGGCTGGCAGTGATGAGCAGCTaGCTTCCCAGCCTCGTTTGCAGGGTGGTGCCATTGACAAGGTCA +
Preference number: 6 (lower is better)
Translates to: VSVGWSGSWLAVMSS*LPSLVCRVVPLTRS
Trigger: TGACCTTGTCAATGGCACCACCCTGCAAACGAGGCTGGGAAGCAAGCTGCTCATCACTGCCAGCCAGGACCCACTCCAACCGACGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388887.7
ENST00000548579.1
CDS TCA 72 bp CATGCCTTCAGCACAACTGCCTCTGCCATTGCAGGGTaGCCCCGCTCCACCTGGGCACTCTATACAGTCTGG +
Preference number: 6 (lower is better)
Translates to: HAFSTTASAIAG*PRSTWALYTVW
Trigger: CCAGACTGTATAGAGTGCCCAGGTGGAGCGGGGTCACCCTGCAATGGCAGAGGCAGTTGTGCTGAAGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp AGAGTCTCCCGGCAGAGCCGTCTCTGCATGTGCCAGTaGGGCAGGCCCCATCGCTGTCTATCCTGTTATTGC +
Preference number: 6 (lower is better)
Translates to: RVSRQSRLCMCQ*GRPHRCLSCYC
Trigger: GCAATAACAGGATAGACAGCGATGGGGCCTGCCTCACTGGCACATGCAGAGACGGCTCTGCCGGGAGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp GCTGACACACGCAGGTGTGGGTGCCCGTGCCAGTTTTaGTGCATTCTGCATTGCGGCTACAGCCTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: ADTRRCGCPCQF*CILHCGYSLLE
Trigger: CTCCAGGAGGCTGTAGCCGCAATGCAGAATGCATCAAAACTGGCACGGGCACCCACACCTGCGTGTGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp GGCTGCACCGCTCCCGGCAGCCTTCCAGGTTCCTCTTaGAGGGCAGGTTGTAGAGACACTTCTGCTTCACAC +
Preference number: 6 (lower is better)
Translates to: GCTAPGSLPGSS*RAGCRDTSASH
Trigger: GTGTGAAGCAGAAGTGTCTCTACAACCTGCCCTTCAAGAGGAACCTGGAAGGCTGCCGGGAGCGGTGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp CCAGGCACACAATGCCATCACCCGTGTAGCCTGCTTTaGACGTGCACACTCGCCTTCCTGGGGTGGTTCTCT +
Preference number: 6 (lower is better)
Translates to: PGTQCHHPCSLL*TCTLAFLGWFS
Trigger: AGAGAACCACCCCAGGAAGGCGAGTGTGCACGTGCAAAGCAGGCTACACGGGTGATGGCATTGTGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp CCAAAGCAGACATTCTGGGCATTCCCTGGGCAGGGCTaGCATTGGGGGCCAAAGAAGCCGGCACAGCATTCT +
Preference number: 6 (lower is better)
Translates to: PKQTFWAFPGQG*HWGPKKPAQHS
Trigger: AGAATGCTGTGCCGGCTTCTTTGGCCCCCAATGCCAGCCCTGCCCAGGGAATGCCCAGAATGTCTGCTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp AAGTCCTGTTGTTCAGCAGGTAGGGCATGGAGGGCTTaGTCGGTGGGCCAGAAGAGAGTGACTGGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: KSCCSAGRAWRA*SVGQKRVTGVW
Trigger: CCACACCCCAGTCACTCTCTTCTGGCCCACCGACCAAGCCCTCCATGCCCTACCTGCTGAACAACAGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp CATGGCACTGCCCATTGTCCTGTAAGCAGCGGTCAATaGGCAGCTGCTCCGGCTCACAGTTCAGCCCATCTC +
Preference number: 6 (lower is better)
Translates to: HGTAHCPVSSGQ*AAAPAHSSAHL
Trigger: GAGATGGGCTGAACTGTGAGCCGGAGCAGCTGCCCATTGACCGCTGCTTACAGGACAATGGGCAGTGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp TCAACAAACCTGGTCTCCGTCGGTTGGAGTGGGTCCTaGCTGGCAGTGATGAGCAGCTTGCTTCCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: STNLVSVGWSGS*LAVMSSLLPSL
Trigger: GAGGCTGGGAAGCAAGCTGCTCATCACTGCCAGCCAGGACCCACTCCAACCGACGGAGACCAGGTTTGTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388887.7
ENST00000548579.1
CDS CAA 72 bp ACACAAGAACATGCTTGGTCACAGTGGATGCCGTACTaGCCCTCGGTGCAGGTCTCGCAGGCTGTGCCGCTG +
Preference number: 6 (lower is better)
Translates to: TQEHAWSQWMPY*PSVQVSQAVPL
Trigger: CAGCGGCACAGCCTGCGAGACCTGCACCGAGGGCAAGTACGGCATCCACTGTGACCAAGCATGTTCTTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp AATCTCCCCGGCCAGCACATCTCACACGCCGTCCCATaGAAGCCGGTGTTGCATTTACACTCTCCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: NLPGQHISHAVP*KPVLHLHSPVA
Trigger: GGCCACCGGAGAGTGTAAATGCAACACCGGCTTCAATGGGACGGCGTGTGAGATGTGCTGGCCGGGGAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp TCCCGTCCAGGCCCTCACAGTGTCCTCAAGGGGTCATaGCCCTCAAGCTGCCGTTCTTCAGAGTCCGTGAAG +
Preference number: 6 (lower is better)
Translates to: SRPGPHSVLKGS*PSSCRSSESVK
Trigger: CTTCACGGACTCTGAAGAACGGCAGCTTGAGGGCAATGACCCCTTGAGGACACTGTGAGGGCCTGGACGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp TGGAAGTGGAGGTCGACACATTTGGCGTCTGCATGGCACTGCCCATaGTCCTGTAAGCAGCGGTCAATGGGCAGCTGCTCCGGCTCACAG +
Preference number: 6 (lower is better)
Translates to: WKWRSTHLASAWHCP*SCKQRSMGSCSGSQ
Trigger: CTGTGAGCCGGAGCAGCTGCCCATTGACCGCTGCTTACAGGACAATGGGCAGTGCCATGCAGACGCCAAATGTGTCGACCTCCACTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp GCACTCTATACAGTCTGGGCCCCAGCGGCCAGGACAACACCGAGGTaGGAGATAGTCCTTCCTACAAATATGGCGGCATCCGGGGAGAGA +
Preference number: 6 (lower is better)
Translates to: ALYTVWAPAARTTPR*EIVLPTNMAASGER
Trigger: TCTCTCCCCGGATGCCGCCATATTTGTAGGAAGGACTATCTCCAACCTCGGTGTTGTCCTGGCCGCTGGGGCCCAGACTGTATAGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp CAGGTTCCATTTCCTTCCATGCCTTCAGCACAACTGCCTCTGCCATaGCAGGGTGACCCCGCTCCACCTGGGCACTCTATACAGTCTGGG +
Preference number: 6 (lower is better)
Translates to: QVPFPSMPSAQLPLP*QGDPAPPGHSIQSG
Trigger: CCCAGACTGTATAGAGTGCCCAGGTGGAGCGGGGTCACCCTGCAATGGCAGAGGCAGTTGTGCTGAAGGCATGGAAGGAAATGGAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp TTCCATTTCCTTCCATGCCTTCAGCACAACTGCCTCTaGCATTGCAGGGTGACCCCGCTCCACCTGGGCACT +
Preference number: 6 (lower is better)
Translates to: FHFLPCLQHNCL*HCRVTPLHLGT
Trigger: AGTGCCCAGGTGGAGCGGGGTCACCCTGCAATGGCAGAGGCAGTTGTGCTGAAGGCATGGAAGGAAATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp AGCAGGTTCCATTTCCTTCCATGCCTTCAGCACAACTaGCTCTGCCATTGCAGGGTGACCCCGCTCCACCTG +
Preference number: 6 (lower is better)
Translates to: SRFHFLPCLQHN*LCHCRVTPLHL
Trigger: CAGGTGGAGCGGGGTCACCCTGCAATGGCAGAGGCAGTTGTGCTGAAGGCATGGAAGGAAATGGAACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp ACTGACACTGGGAGCCTTGGAAGCCCTCCTCACAAATaGATGTCCCGTTGCCGCCGAGGCTATCTGCACACT +
Preference number: 6 (lower is better)
Translates to: TDTGSLGSPPHK*MSRCRRGYLHT
Trigger: AGTGTGCAGATAGCCTCGGCGGCAACGGGACATGCATTTGTGAGGAGGGCTTCCAAGGCTCCCAGTGTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp CACATACAAACAGGATGCGTTGTCGTGGCAGCCGCCTaGACTGGGCAGCAGGCAGTTGTTGATCTCCGAGCA +
Preference number: 6 (lower is better)
Translates to: HIQTGCVVVAAA*TGQQAVVDLRA
Trigger: TGCTCGGAGATCAACAACTGCCTGCTGCCCAGTGCAGGCGGCTGCCACGACAACGCATCCTGTTTGTATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp GATTTCCAGGCACACAATGCCATCACCCGTGTAGCCTaGTTTGCACGTGCACACTCGCCTTCCTGGGGTGGT +
Preference number: 6 (lower is better)
Translates to: DFQAHNAITRVA*FARAHSPSWGG
Trigger: ACCACCCCAGGAAGGCGAGTGTGCACGTGCAAAGCAGGCTACACGGGTGATGGCATTGTGTGCCTGGAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp GACCTTCGTGCCCTTCTGGGAGCATCTGGCCACCTTTaGACAGCCCCCGTTGTCCTGTTTGCAGAAATCCAC +
Preference number: 6 (lower is better)
Translates to: DLRALLGASGHL*TAPVVLFAEIH
Trigger: GTGGATTTCTGCAAACAGGACAACGGGGGCTGTGCAAAGGTGGCCAGATGCTCCCAGAAGGGCACGAAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp CTTGGCCTTCTGGGCATAGGAGAGCTGGTTGTAGGTTaGCATGGTCGCAGCTTCGTTGGCACAGGCCTCTCT +
Preference number: 6 (lower is better)
Translates to: LGLLGIGELVVG*HGRSFVGTGLS
Trigger: AGAGAGGCCTGTGCCAACGAAGCTGCGACCATGGCAACCTACAACCAGCTCTCCTATGCCCAGAAGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp TGTGAACACGTATGTGCTGGGCGTGTTTGTTTGTGCTaGTGCCTTGTGTTGGGAGGCAGGATGGGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: CEHVCAGRVCLC*CLVLGGRMGWG
Trigger: CCCCCAGCCCATCCTGCCTCCCAACACAAGGCAGCAGCACAAACAAACACGCCCAGCACATACGTGTTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS GCA 72 bp CCCGTCCAGGCCCTCACAGTGTCCTCAAGGGGTCATTaGCCTCAAGCTGCCGTTCTTCAGAGTCCTGGAAAA +
Preference number: 6 (lower is better)
Translates to: PVQALTVSSRGH*PQAAVLQSPGK
Trigger: TTTTCCAGGACTCTGAAGAACGGCAGCTTGAGGGCAATGACCCCTTGAGGACACTGTGAGGGCCTGGACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS CCA 72 bp CGTGTAGCCTGCTTTGCACGTGCACACTCGCCTTCCTaGGGTGGTTCTCTTACAGTCAGCCTTGGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: RVACFARAHSPS*GGSLTVSLGRA
Trigger: TGCTCTGCCAAGGCTGACTGTAAGAGAACCACCCCAGGAAGGCGAGTGTGCACGTGCAAAGCAGGCTACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp GCTTGGTCGGTGGGCCAGAAGAGAGTGACTGGGGTGTaGATGGGATCGGTGATGACACTCAGCAAACCTGAG +
Preference number: 6 (lower is better)
Translates to: AWSVGQKRVTGV*MGSVMTLSKPE
Trigger: CTCAGGTTTGCTGAGTGTCATCACCGATCCCATCCACACCCCAGTCACTCTCTTCTGGCCCACCGACCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp ATGGAGGGCTTGGTCGGTGGGCCAGAAGAGAGTGACTaGGGTGTGGATGGGATCGGTGATGACACTCAGCAA +
Preference number: 6 (lower is better)
Translates to: MEGLVGGPEESD*GVDGIGDDTQQ
Trigger: TTGCTGAGTGTCATCACCGATCCCATCCACACCCCAGTCACTCTCTTCTGGCCCACCGACCAAGCCCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp CCTTCTGGGCATAGGAGAGCTGGTTGTAGGTTGCCATaGTCGCAGCTTCGTTGGCACAGGCCTCTCTGGCTT +
Preference number: 6 (lower is better)
Translates to: PSGHRRAGCRLP*SQLRWHRPLWL
Trigger: AAGCCAGAGAGGCCTGTGCCAACGAAGCTGCGACCATGGCAACCTACAACCAGCTCTCCTATGCCCAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp AGACAAGGTCTCATTCTCCCCCAGCCCACTGTTCTGTaGCACAAAGAGGGTGCCGCGGATGGACAGGTCAGT +
Preference number: 6 (lower is better)
Translates to: RQGLILPQPTVL*HKEGAADGQVS
Trigger: ACTGACCTGTCCATCCGCGGCACCCTCTTTGTGCCACAGAACAGTGGGCTGGGGGAGAATGAGACCTTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388887.7
ENST00000548579.1
CDS CAA 72 bp AGGTCGACACATTTGGCGTCTGCATGGCACTGCCCATaGTCCTGTAAGCAGCGGTCAATGGGCAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: RSTHLASAWHCP*SCKQRSMGSCS
Trigger: GGAGCAGCTGCCCATTGACCGCTGCTTACAGGACAATGGGCAGTGCCATGCAGACGCCAAATGTGTCGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp ACTTGGCCTTCTGGGCATAGGAGAGCTGGTTGTAGGTaGCCATGGTCGCAGCTTCGTTGGCACAGGCCTCTC +
Preference number: 6 (lower is better)
Translates to: TWPSGHRRAGCR*PWSQLRWHRPL
Trigger: GAGAGGCCTGTGCCAACGAAGCTGCGACCATGGCAACCTACAACCAGCTCTCCTATGCCCAGAAGGCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp GGGGTCCACAGGCAAGCACACTTGGCCATCCCCACGGTAGCCTTCTaGGCATGTACAACTGTGCCGATTTGGTCCCAGGTACGTACAATG +
Preference number: 6 (lower is better)
Translates to: GVHRQAHLAIPTVAF*ACTTVPIWSQVRTM
Trigger: CATTGTACGTACCTGGGACCAAATCGGCACAGTTGTACATGCCAAGAAGGCTACCGTGGGGATGGCCAAGTGTGCTTGCCTGTGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp ACAGGTGGTACTTGGCCTTCTGGGCATAGGAGAGCTGGTTGTAGGTaGCCATGGTCGCAGCTTCGTTGGCACAGGCCTCTCTGGCTTTGT +
Preference number: 6 (lower is better)
Translates to: TGGTWPSGHRRAGCR*PWSQLRWHRPLWLC
Trigger: ACAAAGCCAGAGAGGCCTGTGCCAACGAAGCTGCGACCATGGCAACCTACAACCAGCTCTCCTATGCCCAGAAGGCCAAGTACCACCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp CCGGTGTTGCATTTACACTCTCCGGTGGCCGAGTACTaGTCAAGGCAGACACCCCGGTTATTACACGGGGCA +
Preference number: 6 (lower is better)
Translates to: PVLHLHSPVAEY*SRQTPRLLHGA
Trigger: TGCCCCGTGTAATAACCGGGGTGTCTGCCTTGATCAGTACTCGGCCACCGGAGAGTGTAAATGCAACACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp AGCCTTGGAAGCCCTCCTCACAAATGCATGTCCCGTTaGCGCCGAGGCTATCTGCACACTGTCCATTTCCTG +
Preference number: 6 (lower is better)
Translates to: SLGSPPHKCMSR*RRGYLHTVHFL
Trigger: CAGGAAATGGACAGTGTGCAGATAGCCTCGGCGGCAACGGGACATGCATTTGTGAGGAGGGCTTCCAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp AAGTGGAGGTCGACACATTTGGCGTCTGCATGGCACTaGCCATTGTCCTGTAAGCAGCGGTCAATGGGCAGC +
Preference number: 6 (lower is better)
Translates to: KWRSTHLASAWH*PLSCKQRSMGS
Trigger: GCTGCCCATTGACCGCTGCTTACAGGACAATGGGCAGTGCCATGCAGACGCCAAATGTGTCGACCTCCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp TGGGCTGGGGGTAGGGCCACCTGTTTTAGTCTCTCCTaGTTGAAGCTGGGTGGCCCAAGACAAATCATCCCA +
Preference number: 6 (lower is better)
Translates to: WAGGRATCFSLS*LKLGGPRQIIP
Trigger: TGGGATGATTTGTCTTGGGCCACCCAGCTTCAAGCAGGAGAGACTAAAACAGGTGGCCCTACCCCCAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS GCA 72 bp CACTGTGAACACGTATGTGCTGGGCGTGTTTGTTTGTaGTGCTGCCTTGTGTTGGGAGGCAGGATGGGCTGG +
Preference number: 6 (lower is better)
Translates to: HCEHVCAGRVCL*CCLVLGGRMGW
Trigger: CCAGCCCATCCTGCCTCCCAACACAAGGCAGCAGCACAAACAAACACGCCCAGCACATACGTGTTCACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS CCA 72 bp GCAAGGCTGCACATTCAGGGATGGGCTTGTCACACTTaGGGCCAGTGTACGCAGAGTAGCACTCACAGGTTC +
Preference number: 6 (lower is better)
Translates to: ARLHIQGWACHT*GQCTQSSTHRF
Trigger: GAACCTGTGAGTGCTACTCTGCGTACACTGGCCCCAAGTGTGACAAGCCCATCCCTGAATGTGCAGCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp TTTCCTTCCATGCCTTCAGCACAACTGCCTCTGCCATaGCAGGGTGACCCCGCTCCACCTGGGCACTCTATA +
Preference number: 6 (lower is better)
Translates to: FPSMPSAQLPLP*QGDPAPPGHSI
Trigger: TATAGAGTGCCCAGGTGGAGCGGGGTCACCCTGCAATGGCAGAGGCAGTTGTGCTGAAGGCATGGAAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp GAGCCTTGGAAGCCCTCCTCACAAATGCATGTCCCGTaGCCGCCGAGGCTATCTGCACACTGTCCATTTCCT +
Preference number: 6 (lower is better)
Translates to: EPWKPSSQMHVP*PPRLSAHCPFP
Trigger: AGGAAATGGACAGTGTGCAGATAGCCTCGGCGGCAACGGGACATGCATTTGTGAGGAGGGCTTCCAAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp AGACCTTCGTGCCCTTCTGGGAGCATCTGGCCACCTTaGCACAGCCCCCGTTGTCCTGTTTGCAGAAATCCA +
Preference number: 6 (lower is better)
Translates to: RPSCPSGSIWPP*HSPRCPVCRNP
Trigger: TGGATTTCTGCAAACAGGACAACGGGGGCTGTGCAAAGGTGGCCAGATGCTCCCAGAAGGGCACGAAGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp GAGCACTGTGAACACGTATGTGCTGGGCGTGTTTGTTaGTGCTGCTGCCTTGTGTTGGGAGGCAGGATGGGC +
Preference number: 6 (lower is better)
Translates to: EHCEHVCAGRVC*CCCLVLGGRMG
Trigger: GCCCATCCTGCCTCCCAACACAAGGCAGCAGCACAAACAAACACGCCCAGCACATACGTGTTCACAGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS CAA 90 bp ATTACCAAAGCAGACATTCTGGGCATTCCCTGGGCAGGGCTGGCATaGGGGGCCAAAGAAGCCGGCACAGCATTCTCTCGTAATGACGGT +
Preference number: 6 (lower is better)
Translates to: ITKADILGIPWAGLA*GAKEAGTAFSRNDG
Trigger: ACCGTCATTACGAGAGAATGCTGTGCCGGCTTCTTTGGCCCCCAATGCCAGCCCTGCCCAGGGAATGCCCAGAATGTCTGCTTTGGTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp CACACCCAGGTCAAACAAGAGCTCCCGCTGCACAATTCTGCAGGTTaGGCCATTCAGAAAGAGGTCACCGATGTCCCTGCCAGCTCCACA +
Preference number: 6 (lower is better)
Translates to: HTQVKQELPLHNSAG*AIQKEVTDVPASST
Trigger: TGTGGAGCTGGCAGGGACATCGGTGACCTCTTTCTGAATGGCCAAACCTGCAGAATTGTGCAGCGGGAGCTCTTGTTTGACCTGGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp AGGCGAACATCTGGAATTTTCTGGGCAGAGCAAGGCTaGACATTCAGGGATGGGCTTGTCACACTTGGGGCC +
Preference number: 6 (lower is better)
Translates to: RRTSGIFWAEQG*TFRDGLVTLGA
Trigger: GGCCCCAAGTGTGACAAGCCCATCCCTGAATGTGCAGCCTTGCTCTGCCCAGAAAATTCCAGATGTTCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp AGCCTTTGCAGCACTTTGGAATCTTCACAGTGGCATTaGAGTACCGGGCACAGCCGCTCTTCAGGCTCCCAA +
Preference number: 6 (lower is better)
Translates to: SLCSTLESSQWH*STGHSRSSGSQ
Trigger: TTGGGAGCCTGAAGAGCGGCTGTGCCCGGTACTGCAATGCCACTGTGAAGATTCCAAAGTGCTGCAAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp ACACAATGCCATCACCCGTGTAGCCTGCTTTGCACGTaGACACTCGCCTTCCTGGGGTGGTTCTCTTACAGT +
Preference number: 6 (lower is better)
Translates to: TQCHHPCSLLCT*TLAFLGWFSYS
Trigger: ACTGTAAGAGAACCACCCCAGGAAGGCGAGTGTGCACGTGCAAAGCAGGCTACACGGGTGATGGCATTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp CTGCCAGCTCCACATTTCACACTCAGCTCTGAACCTTaGAGGGTCTTCCAGGCAGTGGATGTGGGAAGATCC +
Preference number: 6 (lower is better)
Translates to: LPAPHFTLSSEP*RVFQAVDVGRS
Trigger: GGATCTTCCCACATCCACTGCCTGGAAGACCCTGCAAGGTTCAGAGCTGAGTGTGAAATGTGGAGCTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp GAGCCATCTCCCAAGGGTCCTTGGTTGCATCTCCCATaGACACAAGAACATGCTTGGTCACAGTGGATGCCG +
Preference number: 6 (lower is better)
Translates to: EPSPKGPWLHLP*TQEHAWSQWMP
Trigger: CGGCATCCACTGTGACCAAGCATGTTCTTGTGTCCATGGGAGATGCAACCAAGGACCCTTGGGAGATGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp TTGAACAGGAAGTCCTGTTGTTCAGCAGGTAGGGCATaGAGGGCTTGGTCGGTGGGCCAGAAGAGAGTGACT +
Preference number: 6 (lower is better)
Translates to: LNRKSCCSAGRA*RAWSVGQKRVT
Trigger: AGTCACTCTCTTCTGGCCCACCGACCAAGCCCTCCATGCCCTACCTGCTGAACAACAGGACTTCCTGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp TCCTGGAAGTGGAGGTCGACACATTTGGCGTCTGCATaGCACTGCCCATTGTCCTGTAAGCAGCGGTCAATG +
Preference number: 6 (lower is better)
Translates to: SWKWRSTHLASA*HCPLSCKQRSM
Trigger: CATTGACCGCTGCTTACAGGACAATGGGCAGTGCCATGCAGACGCCAAATGTGTCGACCTCCACTTCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp AAGGTCAGCTTATACTGGCCCAGTGGGGAGCGTAGATaGAACACCCCAACAGTGGTATCCTGGAAGTGGAGG +
Preference number: 6 (lower is better)
Translates to: KVSLYWPSGERR*NTPTVVSWKWR
Trigger: CCTCCACTTCCAGGATACCACTGTTGGGGTGTTCCATCTACGCTCCCCACTGGGCCAGTATAAGCTGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp CAGGCCTCTCTGGCTTTGTCAAAGGTCAGCTTATACTaGCCCAGTGGGGAGCGTAGATGGAACACCCCAACA +
Preference number: 6 (lower is better)
Translates to: QASLALSKVSLY*PSGERRWNTPT
Trigger: TGTTGGGGTGTTCCATCTACGCTCCCCACTGGGCCAGTATAAGCTGACCTTTGACAAAGCCAGAGAGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp TTGCCATGGTCGCAGCTTCGTTGGCACAGGCCTCTCTaGCTTTGTCAAAGGTCAGCTTATACTGGCCCAGTG +
Preference number: 6 (lower is better)
Translates to: LPWSQLRWHRPL*LCQRSAYTGPV
Trigger: CACTGGGCCAGTATAAGCTGACCTTTGACAAAGCCAGAGAGGCCTGTGCCAACGAAGCTGCGACCATGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp AGGCAAGCACACTTGGCCATCCCCACGGTAGCCTTCTaGGCATGTACAACTGTGCCGATTTGGTCCCAGGTA +
Preference number: 6 (lower is better)
Translates to: RQAHLAIPTVAF*ACTTVPIWSQV
Trigger: TACCTGGGACCAAATCGGCACAGTTGTACATGCCAAGAAGGCTACCGTGGGGATGGCCAAGTGTGCTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp CCTGCTGCACACTTGCATGAAGCTGTACCATCTGAGTaGGTGAGGCAGTTGGCGCTGGTATGGCATGTCCCA +
Preference number: 6 (lower is better)
Translates to: PAAHLHEAVPSE*VRQLALVWHVP
Trigger: TGGGACATGCCATACCAGCGCCAACTGCCTCACCAACTCAGATGGTACAGCTTCATGCAAGTGTGCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388887.7
ENST00000549798.1
CDS CAA 90 bp GCAGTTTCCAAAGTTAATTTGGCAGGGGTCCACAGGCAAGCACACTaGGCCATCCCCACGGTAGCCTTCTTGGCATGTACAACTGTGCCG +
Preference number: 6 (lower is better)
Translates to: AVSKVNLAGVHRQAH*AIPTVAFLACTTVP
Trigger: CGGCACAGTTGTACATGCCAAGAAGGCTACCGTGGGGATGGCCAAGTGTGCTTGCCTGTGGACCCCTGCCAAATTAACTTTGGAAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp TCGCCAGCCAACATCACAGTCACAGGAGCCATCTCCCAAGGGTCCTaGGTTGCATCTCCCATGGACACAAGAACATGCTTGGTCACAGTG +
Preference number: 6 (lower is better)
Translates to: SPANITVTGAISQGS*VASPMDTRTCLVTV
Trigger: CACTGTGACCAAGCATGTTCTTGTGTCCATGGGAGATGCAACCAAGGACCCTTGGGAGATGGCTCCTGTGACTGTGATGTTGGCTGGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp CACGTGCACACTCGCCTTCCTGGGGTGGTTCTCTTACAGTCAGCCTaGGCAGAGCAACCTCCATTGCTGATCTCACAGGCATTGATTGCT +
Preference number: 6 (lower is better)
Translates to: HVHTRLPGVVLLQSA*AEQPPLLISQALIA
Trigger: AGCAATCAATGCCTGTGAGATCAGCAATGGAGGTTGCTCTGCCAAGGCTGACTGTAAGAGAACCACCCCAGGAAGGCGAGTGTGCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp TTCGTGCCCTTCTGGGAGCATCTGGCCACCTTTGCACAGCCCCCGTaGTCCTGTTTGCAGAAATCCACAACTGTGCATGTGATTCCGTCA +
Preference number: 6 (lower is better)
Translates to: FVPFWEHLATFAQPP*SCLQKSTTVHVIPS
Trigger: TGACGGAATCACATGCACAGTTGTGGATTTCTGCAAACAGGACAACGGGGGCTGTGCAAAGGTGGCCAGATGCTCCCAGAAGGGCACGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp TGTTGGAATAGGCCAGCACTTCCGTCAGGAAGTTTGTaGGTGAGGGGAAGGACATCAGGACCTGCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: CWNRPALPSGSL*VRGRTSGPAAG
Trigger: ACCTGCTGCAGGTCCTGATGTCCTTCCCCTCACTCACAAACTTCCTGACGGAAGTGCTGGCCTATTCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp ACAAATCATCCCAACTCGGCTGCAGTTTCTTCATCGTaGAGGGGTCGTAGGAAGGTTCTGGGGGAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: TNHPNSAAVSSS*RGRRKVLGELR
Trigger: CCTCAGCTCCCCCAGAACCTTCCTACGACCCCTTCACGATGAAGAAACTGCAGCCGAGTTGGGATGATTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS GCA 72 bp AACAGTTACAGGCAGCCTGGTTGGGTCCTGTCTGTGTaGACTCCGCATTCTTGTCACAGCCACCATGGTTCT +
Preference number: 6 (lower is better)
Translates to: NSYRQPGWVLSV*TPHSCHSHHGS
Trigger: AGAACCATGGTGGCTGTGACAAGAATGCGGAGTGCACACAGACAGGACCCAACCAGGCTGCCTGTAACTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp CCTCACAGTGTCCTCAAGGGGTCATTGCCCTCAAGCTaGCGTTCTTCAGAGTCCTGGAAAAGAGAGGGTTGT +
Preference number: 6 (lower is better)
Translates to: PHSVLKGSLPSS*RSSESWKREGC
Trigger: ACAACCCTCTCTTTTCCAGGACTCTGAAGAACGGCAGCTTGAGGGCAATGACCCCTTGAGGACACTGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS CCA 72 bp CAACAGTGGTATCCTGGAAGTGGAGGTCGACACATTTaGCGTCTGCATGGCACTGCCCATTGTCCTGTAAGC +
Preference number: 6 (lower is better)
Translates to: QQWYPGSGGRHI*RLHGTAHCPVS
Trigger: GCTTACAGGACAATGGGCAGTGCCATGCAGACGCCAAATGTGTCGACCTCCACTTCCAGGATACCACTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp GAAGGTCCCAGGGCATCACCCATCTGTGAATATTCATaGTGTGAGCCAACTCAGCCTGCTGCTCCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: EGPRASPICEYS*CEPTQPAAPLL
Trigger: CAGCAAAGGAGCAGCAGGCTGAGTTGGCTCACACCATGAATATTCACAGATGGGTGATGCCCTGGGACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548073.1
ENST00000548579.1
CDS CAA 72 bp CACGGTAGCCTTCTTGGCATGTACAACTGTGCCGATTaGGTCCCAGGTACGTACAATGAGCATGAGGGTGGC +
Preference number: 6 (lower is better)
Translates to: HGSLLGMYNCAD*VPGTYNEHEGG
Trigger: GCCACCCTCATGCTCATTGTACGTACCTGGGACCAAATCGGCACAGTTGTACATGCCAAGAAGGCTACCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp GTCAAACAAGAGCTCCCGCTGCACAATTCTGCAGGTTaGGCCATTCAGAAAGAGGTCACCGATGTCCCTGCC +
Preference number: 6 (lower is better)
Translates to: VKQELPLHNSAG*AIQKEVTDVPA
Trigger: GGCAGGGACATCGGTGACCTCTTTCTGAATGGCCAAACCTGCAGAATTGTGCAGCGGGAGCTCTTGTTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp CCAACAGTGGTATCCTGGAAGTGGAGGTCGACACATTaGGCGTCTGCATGGCACTGCCCATTGTCCTGTAAG +
Preference number: 6 (lower is better)
Translates to: PTVVSWKWRSTH*ASAWHCPLSCK
Trigger: CTTACAGGACAATGGGCAGTGCCATGCAGACGCCAAATGTGTCGACCTCCACTTCCAGGATACCACTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp GGCCATCCCCACGGTAGCCTTCTTGGCATGTACAACTGTGCCGATTaGGTCCCAGGTACGTACAATGAGCATGAGGGTGGCAGATTTTTC +
Preference number: 6 (lower is better)
Translates to: GHPHGSLLGMYNCAD*VPGTYNEHEGGRFF
Trigger: GAAAAATCTGCCACCCTCATGCTCATTGTACGTACCTGGGACCAAATCGGCACAGTTGTACATGCCAAGAAGGCTACCGTGGGGATGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp CAGCCAACATCACAGTCACAGGAGCCATCTCCCAAGGGTCCTTGGTaGCATCTCCCATGGACACAAGAACATGCTTGGTCACAGTGGATG +
Preference number: 6 (lower is better)
Translates to: QPTSQSQEPSPKGPW*HLPWTQEHAWSQWM
Trigger: CATCCACTGTGACCAAGCATGTTCTTGTGTCCATGGGAGATGCAACCAAGGACCCTTGGGAGATGGCTCCTGTGACTGTGATGTTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp CCATCTGAGTTGGTGAGGCAGTTGGCGCTGGTATGGCATGTCCCATaGCAGTTGTCTTCTGTGGTTGCATTGTCACAATGCACTCCTCGC +
Preference number: 6 (lower is better)
Translates to: PSELVRQLALVWHVP*QLSSVVALSQCTPR
Trigger: GCGAGGAGTGCATTGTGACAATGCAACCACAGAAGACAACTGCAATGGGACATGCCATACCAGCGCCAACTGCCTCACCAACTCAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp CCTGGGGTGGTTCTCTTACAGTCAGCCTTGGCAGAGCAACCTCCATaGCTGATCTCACAGGCATTGATTGCTGTGCAGATGGTCCCGTTT +
Preference number: 6 (lower is better)
Translates to: PGVVLLQSALAEQPP*LISQALIAVQMVPF
Trigger: AAACGGGACCATCTGCACAGCAATCAATGCCTGTGAGATCAGCAATGGAGGTTGCTCTGCCAAGGCTGACTGTAAGAGAACCACCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp TGGGTCCTGGCTGGCAGTGATGAGCAGCTTGCTTCCCAGCCTCGTTaGCAGGGTGGTGCCATTGACAAGGTCATTGTAGAAAAACATGCT +
Preference number: 6 (lower is better)
Translates to: WVLAGSDEQLASQPR*QGGAIDKVIVEKHA
Trigger: AGCATGTTTTTCTACAATGACCTTGTCAATGGCACCACCCTGCAAACGAGGCTGGGAAGCAAGCTGCTCATCACTGCCAGCCAGGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388887.7
ENST00000548579.1
CDS TCA 72 bp TATGGCGGCATCCGGGGAGAGACAGAGAGTATGTTCTaGCCTCAAAGGTGTACCTGCAATCTCGAACCCCTA +
Preference number: 6 (lower is better)
Translates to: YGGIRGETESMF*PQRCTCNLEPL
Trigger: TAGGGGTTCGAGATTGCAGGTACACCTTTGAGGTCAGAACATACTCTCTGTCTCTCCCCGGATGCCGCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp CACCGAGGTCCGTATTTATTGGGATCAGAGCAGAACTaGCACTGGGAGCCTTGGAAGCCCTCCTCACAAATG +
Preference number: 6 (lower is better)
Translates to: HRGPYLLGSEQN*HWEPWKPSSQM
Trigger: CATTTGTGAGGAGGGCTTCCAAGGCTCCCAGTGTCAGTTCTGCTCTGATCCCAATAAATACGGACCTCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp AGAGAGGGTTGTAAGGGGGCAGGGCATTCTGTGTGTTaGGTCCTAGTTGAATCTTTCTGGTGGCCACTGGTC +
Preference number: 6 (lower is better)
Translates to: REGCKGAGHSVC*VLVESFWWPLV
Trigger: GACCAGTGGCCACCAGAAAGATTCAACTAGGACTCAACACACAGAATGCCCTGCCCCCTTACAACCCTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552777.1
CDS GCA 72 bp AGCACTCACAGGTTCCATCGCCATCTAGTCCACTGTTaGACACCCCATGCACACAGTTGCACACTGATGAAC +
Preference number: 6 (lower is better)
Translates to: STHRFHRHLVHC*TPHAHSCTLMN
Trigger: GTTCATCAGTGTGCAACTGTGTGCATGGGGTGTGCAACAGTGGACTAGATGGCGATGGAACCTGTGAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp CACCCAGGTCAAACAAGAGCTCCCGCTGCACAATTCTaGAGGTTTGGCCATTCAGAAAGAGGTCACCGATGT +
Preference number: 6 (lower is better)
Translates to: HPGQTRAPAAQF*RFGHSERGHRC
Trigger: ACATCGGTGACCTCTTTCTGAATGGCCAAACCTGCAGAATTGTGCAGCGGGAGCTCTTGTTTGACCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp ACGGTAGCCTTCTTGGCATGTACAACTGTGCCGATTTaGTCCCAGGTACGTACAATGAGCATGAGGGTGGCA +
Preference number: 6 (lower is better)
Translates to: TVAFLACTTVPI*SQVRTMSMRVA
Trigger: TGCCACCCTCATGCTCATTGTACGTACCTGGGACCAAATCGGCACAGTTGTACATGCCAAGAAGGCTACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp AAATACAACTGGCTGTCCCATTGCTGTATTCACAGGTaGCGTGGATGTGACAGAACTGCACGTAGGGCCCAC +
Preference number: 6 (lower is better)
Translates to: KYNWLSHCCIHR*RGCDRTARRAH
Trigger: GTGGGCCCTACGTGCAGTTCTGTCACATCCACGCCACCTGTGAATACAGCAATGGGACAGCCAGTTGTATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp ACATCACAGTCACAGGAGCCATCTCCCAAGGGTCCTTaGTTGCATCTCCCATGGACACAAGAACATGCTTGG +
Preference number: 6 (lower is better)
Translates to: TSQSQEPSPKGP*LHLPWTQEHAW
Trigger: CCAAGCATGTTCTTGTGTCCATGGGAGATGCAACCAAGGACCCTTGGGAGATGGCTCCTGTGACTGTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp GTCTGTGTGCACTCCGCATTCTTGTCACAGCCACCATaGTTCTCCAAACACGGGTTGATTTCCAGGCACACA +
Preference number: 6 (lower is better)
Translates to: VCVHSAFLSQPP*FSKHGLISRHT
Trigger: TGTGTGCCTGGAAATCAACCCGTGTTTGGAGAACCATGGTGGCTGTGACAAGAATGCGGAGTGCACACAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp AGCTGGTGGCAGGCGACCACATGGTACCGAAGAACCTaGGGCATTAAACCGTATTTGTCCCAGTCTTTAACC +
Preference number: 6 (lower is better)
Translates to: SWWQATTWYRRT*GIKPYLSQSLT
Trigger: GGTTAAAGACTGGGACAAATACGGTTTAATGCCCCAGGTTCTTCGGTACCATGTGGTCGCCTGCCACCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp AGGTTTTCCAGAAGCAGCTGGTGGCAGGCGACCACATaGTACCGAAGAACCTGGGGCATTAAACCGTATTTG +
Preference number: 6 (lower is better)
Translates to: RFSRSSWWQATT*YRRTWGIKPYL
Trigger: CAAATACGGTTTAATGCCCCAGGTTCTTCGGTACCATGTGGTCGCCTGCCACCAGCTGCTTCTGGAAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp TTTGAGATCAATTTCAGGTTTTCCAGAAGCAGCTGGTaGCAGGCGACCACATGGTACCGAAGAACCTGGGGC +
Preference number: 6 (lower is better)
Translates to: FEINFRFSRSSW*QATTWYRRTWG
Trigger: GCCCCAGGTTCTTCGGTACCATGTGGTCGCCTGCCACCAGCTGCTTCTGGAAAACCTGAAATTGATCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp CACTCAGCTCTGAACCTTGCAGGGTCTTCCAGGCAGTaGATGTGGGAAGATCCACAGCTAAAACCTTGGCAT +
Preference number: 6 (lower is better)
Translates to: HSALNLAGSSRQ*MWEDPQLKPWH
Trigger: ATGCCAAGGTTTTAGCTGTGGATCTTCCCACATCCACTGCCTGGAAGACCCTGCAAGGTTCAGAGCTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp TCAAACAAGAGCTCCCGCTGCACAATTCTGCAGGTTTaGCCATTCAGAAAGAGGTCACCGATGTCCCTGCCA +
Preference number: 6 (lower is better)
Translates to: SNKSSRCTILQV*PFRKRSPMSLP
Trigger: TGGCAGGGACATCGGTGACCTCTTTCTGAATGGCCAAACCTGCAGAATTGTGCAGCGGGAGCTCTTGTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp ACACTTCTGCTTCACACCCTTTGGTTTACTCCACCTTaGGCAGCTGGGAGTATTGACACAGCTCCCACACTC +
Preference number: 6 (lower is better)
Translates to: TLLLHTLWFTPP*AAGSIDTAPTL
Trigger: GAGTGTGGGAGCTGTGTCAATACTCCCAGCTGCCCAAGGTGGAGTAAACCAAAGGGTGTGAAGCAGAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp CCAGGTTACACTCACACGTGTTGTTCTCCTTACAGGTaGCATGAGCAGAACAAGGAGGCGTACACACTGCAG +
Preference number: 6 (lower is better)
Translates to: PGYTHTCCSPYR*HEQNKEAYTLQ
Trigger: CTGCAGTGTGTACGCCTCCTTGTTCTGCTCATGCCACCTGTAAGGAGAACAACACGTGTGAGTGTAACCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp AAAGTTAATTTGGCAGGGGTCCACAGGCAAGCACACTaGGCCATCCCCACGGTAGCCTTCTTGGCATGTACA +
Preference number: 6 (lower is better)
Translates to: KVNLAGVHRQAH*AIPTVAFLACT
Trigger: TGTACATGCCAAGAAGGCTACCGTGGGGATGGCCAAGTGTGCTTGCCTGTGGACCCCTGCCAAATTAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp GGCTATCTGCACACTGTCCATTTCCTGAGCATGGATTaGAGAAGCCTCCTGGACACTGGTTGCAGTCAGGTC +
Preference number: 6 (lower is better)
Translates to: GYLHTVHFLSMD*RSLLDTGCSQV
Trigger: GACCTGACTGCAACCAGTGTCCAGGAGGCTTCTCAAATCCATGCTCAGGAAATGGACAGTGTGCAGATAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp TCACAGTCACAGGAGCCATCTCCCAAGGGTCCTTGGTaGCATCTCCCATGGACACAAGAACATGCTTGGTCA +
Preference number: 6 (lower is better)
Translates to: SQSQEPSPKGPW*HLPWTQEHAWS
Trigger: TGACCAAGCATGTTCTTGTGTCCATGGGAGATGCAACCAAGGACCCTTGGGAGATGGCTCCTGTGACTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp CATCTGGCCACCTTTGCACAGCCCCCGTTGTCCTGTTaGCAGAAATCCACAACTGTGCATGTGATTCCGTCA +
Preference number: 6 (lower is better)
Translates to: HLATFAQPPLSC*QKSTTVHVIPS
Trigger: TGACGGAATCACATGCACAGTTGTGGATTTCTGCAAACAGGACAACGGGGGCTGTGCAAAGGTGGCCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp CCATCTGAGTTGGTGAGGCAGTTGGCGCTGGTATGGCATGTCCCATaGCAGTTGTCTTCTGTGGTTGCTGAAAAAGAGAACCAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: PSELVRQLALVWHVP*QLSSVVAEKENQLL
Trigger: CAGCAACTGGTTCTCTTTTTCAGCAACCACAGAAGACAACTGCAATGGGACATGCCATACCAGCGCCAACTGCCTCACCAACTCAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549798.1
CDS TCA 72 bp AGGTCATTCTTCAGGAGTTTCTCCTCCAGGACCACATaGTACCGGAGGACGTCCTCCTCTAGAGACAAGACT +
Preference number: 6 (lower is better)
Translates to: RSFFRSFSSRTT*YRRTSSSRDKT
Trigger: AGTCTTGTCTCTAGAGGAGGACGTCCTCCGGTATCATGTGGTCCTGGAGGAGAAACTCCTGAAGAATGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp GTAACCTTTCTGGCAAATGCATTCAGTTCGGCCTGGTaGGACGGTGGTGCAATTTGCATTCCTATGACACGG +
Preference number: 6 (lower is better)
Translates to: VTFLANAFSSAW*DGGAICIPMTR
Trigger: CCGTGTCATAGGAATGCAAATTGCACCACCGTCGCACCAGGCCGAACTGAATGCATTTGCCAGAAAGGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp AGAGTGGCCACTTCAAGCTGGGTAAATGGGACAATGTaGTATCTGACGAGTTCCAGAAGCTTCCGAGATCCC +
Preference number: 6 (lower is better)
Translates to: RVATSSWVNGTM*YLTSSRSFRDP
Trigger: GGGATCTCGGAAGCTTCTGGAACTCGTCAGATACCACATTGTCCCATTTACCCAGCTTGAAGTGGCCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp AACATCACAGTCACAGGAGCCATCTCCCAAGGGTCCTaGGTTGCATCTCCCATGGACACAAGAACATGCTTG +
Preference number: 6 (lower is better)
Translates to: NITVTGAISQGS*VASPMDTRTCL
Trigger: CAAGCATGTTCTTGTGTCCATGGGAGATGCAACCAAGGACCCTTGGGAGATGGCTCCTGTGACTGTGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp TTGGTGAGGCAGTTGGCGCTGGTATGGCATGTCCCATaGCAGTTGTCTTCTGTGGTTGCATTGTCACAATGC +
Preference number: 6 (lower is better)
Translates to: LVRQLALVWHVP*QLSSVVALSQC
Trigger: GCATTGTGACAATGCAACCACAGAAGACAACTGCAATGGGACATGCCATACCAGCGCCAACTGCCTCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp CCTTTGCTGTGTCTTCTGCCTGCGCCGTGGGAGAGTTaGAGGACTTTTCCTTTCCTCAGTGAATCCTATGGT +
Preference number: 6 (lower is better)
Translates to: PLLCLLPAPWES*RTFPFLSESYG
Trigger: ACCATAGGATTCACTGAGGAAAGGAAAAGTCCTCAAACTCTCCCACGGCGCAGGCAGAAGACACAGCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548579.1
CDS TCA 72 bp GGAAGATGGAATAGTCAGGCATCTGTTCCAGCCGCATaGGCAGGTTTGGTAAGGAGCCAGTTAGACGTCTTT +
Preference number: 6 (lower is better)
Translates to: GRWNSQASVPAA*AGLVRSQLDVF
Trigger: AAAGACGTCTAACTGGCTCCTTACCAAACCTGCTCATGCGGCTGGAACAGATGCCTGACTATTCCATCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp TTACACTCACACGTGTTGTTCTCCTTACAGGTGGCATaGGCAGAACAAGGAGGCGTACACACTGCAGGCAAA +
Preference number: 6 (lower is better)
Translates to: LHSHVLFSLQVA*AEQGGVHTAGK
Trigger: TTTGCCTGCAGTGTGTACGCCTCCTTGTTCTGCTCATGCCACCTGTAAGGAGAACAACACGTGTGAGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp CTTTGCTGTGTCTTCTGCCTGCGCCGTGGGAGAGTTTaGGGACTTTTCCTTTCCTCAGTGAATCCTATGGTT +
Preference number: 6 (lower is better)
Translates to: LCCVFCLRRGRV*GLFLSSVNPMV
Trigger: AACCATAGGATTCACTGAGGAAAGGAAAAGTCCTCAAACTCTCCCACGGCGCAGGCAGAAGACACAGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548579.1
CDS GCA 72 bp GTGGGTTCTAACTTGTCCATGGCTCTGTCAAGGATGTaGAGAAGCCCATTGGAAGCAATGATGTCCCCTTGT +
Preference number: 6 (lower is better)
Translates to: VGSNLSMALSRM*RSPLEAMMSPC
Trigger: ACAAGGGGACATCATTGCTTCCAATGGGCTTCTGCACATCCTTGACAGAGCCATGGACAAGTTAGAACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp CTGGACACTGGTTGCAGTCAGGTCCATAGAAGCCTTTaGAGCACTTTGGAATCTTCACAGTGGCATTGCAGT +
Preference number: 6 (lower is better)
Translates to: LDTGCSQVHRSL*STLESSQWHCS
Trigger: ACTGCAATGCCACTGTGAAGATTCCAAAGTGCTGCAAAGGCTTCTATGGACCTGACTGCAACCAGTGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp CACACACACCTGTGCCATTCACTCCATCCAAACAGATaGCATTACCAAAGCAGACATTCTGGGCATTCCCTG +
Preference number: 6 (lower is better)
Translates to: HTHLCHSLHPNR*HYQSRHSGHSL
Trigger: CAGGGAATGCCCAGAATGTCTGCTTTGGTAATGGCATCTGTTTGGATGGAGTGAATGGCACAGGTGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp TTCATCTTCAGTGGAAGGCGAACATCTGGAATTTTCTaGGCAGAGCAAGGCTGCACATTCAGGGATGGGCTT +
Preference number: 6 (lower is better)
Translates to: FIFSGRRTSGIF*AEQGCTFRDGL
Trigger: AAGCCCATCCCTGAATGTGCAGCCTTGCTCTGCCCAGAAAATTCCAGATGTTCGCCTTCCACTGAAGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp ACTGTAGACTTTGTAGGGCAGTTTCCAAAGTTAATTTaGCAGGGGTCCACAGGCAAGCACACTTGGCCATCC +
Preference number: 6 (lower is better)
Translates to: TVDFVGQFPKLI*QGSTGKHTWPS
Trigger: GGATGGCCAAGTGTGCTTGCCTGTGGACCCCTGCCAAATTAACTTTGGAAACTGCCCTACAAAGTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp GCTGCCGCGGCAGGTAAATCCATCTCCAATGTAGTTTaGCTTGCAAGTACAAGTCCTTTCTACTTGCCCAGT +
Preference number: 6 (lower is better)
Translates to: AAAAGKSISNVV*LASTSPFYLPS
Trigger: ACTGGGCAAGTAGAAAGGACTTGTACTTGCAAGCCAAACTACATTGGAGATGGATTTACCTGCCGCGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp CAGTTGCACACTGATGAACAGCTGGGTCCAAATAAGTaGTCGTCAGCACAGGTTTCACAGGCTGTTCCACCA +
Preference number: 6 (lower is better)
Translates to: QLHTDEQLGPNK*SSAQVSQAVPP
Trigger: TGGTGGAACAGCCTGTGAAACCTGTGCTGACGACAACTTATTTGGACCCAGCTGTTCATCAGTGTGCAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp CACTGTAGACTTTGTAGGGCAGTTTCCAAAGTTAATTaGGCAGGGGTCCACAGGCAAGCACACTTGGCCATC +
Preference number: 6 (lower is better)
Translates to: HCRLCRAVSKVN*AGVHRQAHLAI
Trigger: GATGGCCAAGTGTGCTTGCCTGTGGACCCCTGCCAAATTAACTTTGGAAACTGCCCTACAAAGTCTACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp GTTCTCTTACAGTCAGCCTTGGCAGAGCAACCTCCATaGCTGATCTCACAGGCATTGATTGCTGTGCAGATG +
Preference number: 6 (lower is better)
Translates to: VLLQSALAEQPP*LISQALIAVQM
Trigger: CATCTGCACAGCAATCAATGCCTGTGAGATCAGCAATGGAGGTTGCTCTGCCAAGGCTGACTGTAAGAGAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp TTGGTGAGGCAGTTGGCGCTGGTATGGCATGTCCCATaGCAGTTGTCTTCTGTGGTTGCTGAAAAAGAGAAC +
Preference number: 6 (lower is better)
Translates to: LVRQLALVWHVP*QLSSVVAEKEN
Trigger: GTTCTCTTTTTCAGCAACCACAGAAGACAACTGCAATGGGACATGCCATACCAGCGCCAACTGCCTCACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549798.1
CDS CAA 90 bp ATATTTGCACACTGTAGACTTTGTAGGGCAGTTTCCAAAGTTAATTaGGCAGGGGTCCACAGGCAAGCACACTTGGCCATCCCCACGGTA +
Preference number: 6 (lower is better)
Translates to: IFAHCRLCRAVSKVN*AGVHRQAHLAIPTV
Trigger: TACCGTGGGGATGGCCAAGTGTGCTTGCCTGTGGACCCCTGCCAAATTAACTTTGGAAACTGCCCTACAAAGTCTACAGTGTGCAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp TGCTGCGTTTCCATAGCACAGAAAGCCATCTCCTTCATAGCCCTCTaGACAAACACAGCTCCAGACACCAGACGAAGTAGATTGACAGCT +
Preference number: 6 (lower is better)
Translates to: CCVSIAQKAISFIAL*TNTAPDTRRSRLTA
Trigger: AGCTGTCAATCTACTTCGTCTGGTGTCTGGAGCTGTGTTTGTCAAGAGGGCTATGAAGGAGATGGCTTTCTGTGCTATGGAAACGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp ACCAGCACCTTGTTGATGATGTGTATCACTCCATTTGTGGCTGCGTaGTCCCCATCGACAATGGAGGCCCCTTCAATTGTGATATTCCCA +
Preference number: 6 (lower is better)
Translates to: TSTLLMMCITPFVAA*SPSTMEAPSIVIFP
Trigger: TGGGAATATCACAATTGAAGGGGCCTCCATTGTCGATGGGGACAACGCAGCCACAAATGGAGTGATACACATCATCAACAAGGTGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp GTTCACAGTCAATCCCATTTCCTCGAAATCCTTTCTTaGACTCACACTCATTCTGCCCGGGACCCACATACA +
Preference number: 6 (lower is better)
Translates to: VHSQSHFLEILS*THTHSARDPHT
Trigger: TGTATGTGGGTCCCGGGCAGAATGAGTGTGAGTGCAAGAAAGGATTTCGAGGAAATGGGATTGACTGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp CTTTGCCAAGTGAAGGAAGTTGCCCTGCAAAGATGTTaGCAACATGTCAGAAGAAGACAGGGTCTGCAGATC +
Preference number: 6 (lower is better)
Translates to: LCQVKEVALQRC*QHVRRRQGLQI
Trigger: GATCTGCAGACCCTGTCTTCTTCTGACATGTTGGCAACATCTTTGCAGGGCAACTTCCTTCACTTGGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp TGGAGCAAACACTGTGTAGGCATCGGCAGCCTCAATTaGATTCGCCAGATTATATTGAATGATGTAGCCCCG +
Preference number: 6 (lower is better)
Translates to: WSKHCVGIGSLN*IRQIILNDVAP
Trigger: CGGGGCTACATCATTCAATATAATCTGGCGAATGCAATTGAGGCTGCCGATGCCTACACAGTGTTTGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp ATGAGAAGCCATCTCCCACATAGCCCACCTTGCAGGTaGAGTTCACATCTTTCATCCGATAGCAGAAGACAT +
Preference number: 6 (lower is better)
Translates to: MRSHLPHSPPCR*SSHLSSDSRRH
Trigger: ATGTCTTCTGCTATCGGATGAAAGATGTGAACTGCACCTGCAAGGTGGGCTATGTGGGAGATGGCTTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388887.7
ENST00000548073.1
CDS GCA 72 bp GTGCTCTCATACAAGGGGTTCGAGATATTCTCAGGCTaGTGCTTGCCAAGAGCTGCAACATTAATGTCCTCT +
Preference number: 6 (lower is better)
Translates to: VLSYKGFEIFSG*CLPRAATLMSS
Trigger: AGAGGACATTAATGTTGCAGCTCTTGGCAAGCAGCAGCCTGAGAATATCTCGAACCCCTTGTATGAGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp CCCCTATTAGGCCATAAAACCCATAAAGTCTCACTTTaGCTATTGCACCTCTGTGCCTGGCACACAGTAGGT +
Preference number: 6 (lower is better)
Translates to: PLLGHKTHKVSL*LLHLCAWHTVG
Trigger: ACCTACTGTGTGCCAGGCACAGAGGTGCAATAGGCAAAGTGAGACTTTATGGGTTTTATGGCCTAATAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548073.1
CDS CCA 72 bp CCCAGTTTCATCTCTCTCTTTGTTTCATCACATCGATaGGGCAGAATCGGGACAATGGAGGGAGGAATGAGA +
Preference number: 6 (lower is better)
Translates to: PSFISLFVSSHR*GRIGTMEGGMR
Trigger: TCTCATTCCTCCCTCCATTGTCCCGATTCTGCCCCATCGATGTGATGAAACAAAGAGAGAGATGAAACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp GGCTTGCAAGTACAAGTCCTTTCTACTTGCCCAGTGTaGTTGCAGATGGCAAATTCACTACAGCCGCCATTT +
Preference number: 6 (lower is better)
Translates to: GLQVQVLSTCPV*LQMANSLQPPF
Trigger: AAATGGCGGCTGTAGTGAATTTGCCATCTGCAACCACACTGGGCAAGTAGAAAGGACTTGTACTTGCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp ACATCATTTGCCAGAATCTGTCCATTGTCGGTGGTGTaGAACTGTATGAGCTGGTTGGCCATGCTCCTGATG +
Preference number: 6 (lower is better)
Translates to: TSFARICPLSVV*NCMSWLAMLLM
Trigger: CATCAGGAGCATGGCCAACCAGCTCATACAGTTCAACACCACCGACAATGGACAGATTCTGGCAAATGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp AGTTGGCGCTGGTATGGCATGTCCCATTGCAGTTGTCTTCTGTGGTaGCTGAAAAAGAGAACCAGTTGCTGTCTTAGCCCTCTTACTAAA +
Preference number: 6 (lower is better)
Translates to: SWRWYGMSHCSCLLW*LKKRTSCCLSPLTK
Trigger: TTTAGTAAGAGGGCTAAGACAGCAACTGGTTCTCTTTTTCAGCAACCACAGAAGACAACTGCAATGGGACATGCCATACCAGCGCCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549798.1
CDS CCA 72 bp CCAGTTTGTTTTCATCTTCAGTGGAAGGCGAACATCTaGAATTTTCTGGGCAGAGCAAGGCTGCACATTCAG +
Preference number: 6 (lower is better)
Translates to: PVCFHLQWKANI*NFLGRARLHIQ
Trigger: CTGAATGTGCAGCCTTGCTCTGCCCAGAAAATTCCAGATGTTCGCCTTCCACTGAAGATGAAAACAAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp TGCATTCAGTTCGGCCTGGTGCGACGGTGGTGCAATTaGCATTCCTATGACACGGGTTATCTGATTTACATA +
Preference number: 6 (lower is better)
Translates to: CIQFGLVRRWCN*HSYDTGYLIYI
Trigger: TATGTAAATCAGATAACCCGTGTCATAGGAATGCAAATTGCACCACCGTCGCACCAGGCCGAACTGAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp ACCAAAAGCTCATTTACATTGAATCCTTTCAGTCCCTaGTCTGTAGGTAACAGCACCGTGAAGGGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: TKSSFTLNPFSP*SVGNSTVKGPS
Trigger: GCTGGGACCCTTCACGGTGCTGTTACCTACAGACAAGGGACTGAAAGGATTCAATGTAAATGAGCTTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp GTTTGCTCATTGTTGCTCTCAAATGTGGGTTCTAACTaGTCCATGGCTCTGTCAAGGATGTGCAGAAGCCCA +
Preference number: 6 (lower is better)
Translates to: VCSLLLSNVGSN*SMALSRMCRSP
Trigger: TGGGCTTCTGCACATCCTTGACAGAGCCATGGACAAGTTAGAACCCACATTTGAGAGCAACAATGAGCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp AACAGCTCACACAAGTGCCCAGTTTCATCTCTCTCTTaGTTTCATCACATCGATGGGGCAGAATCGGGACAA +
Preference number: 6 (lower is better)
Translates to: NSSHKCPVSSLS*FHHIDGAESGQ
Trigger: TTGTCCCGATTCTGCCCCATCGATGTGATGAAACAAAGAGAGAGATGAAACTGGGCACTTGTGTGAGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp ACATGGTACCGAAGAACCTGGGGCATTAAACCGTATTaGTCCCAGTCTTTAACCCGAGCTTCCTCATCAAAG +
Preference number: 6 (lower is better)
Translates to: TWYRRTWGIKPY*SQSLTRASSSK
Trigger: CTTTGATGAGGAAGCTCGGGTTAAAGACTGGGACAAATACGGTTTAATGCCCCAGGTTCTTCGGTACCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp TCTGGCAAATGCATTCAGTTCGGCCTGGTGCGACGGTGGTGCAATTaGCATTCCTATGACACGGGTTATCTGATTTACATATATCAGTCA +
Preference number: 6 (lower is better)
Translates to: SGKCIQFGLVRRWCN*HSYDTGYLIYIYQS
Trigger: TGACTGATATATGTAAATCAGATAACCCGTGTCATAGGAATGCAAATTGCACCACCGTCGCACCAGGCCGAACTGAATGCATTTGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp GTCATTATGGTTTGCTCATTGTTGCTCTCAAATGTGGGTTCTAACTaGTCCATGGCTCTGTCAAGGATGTGCAGAAGCCCATTGGAAGCA +
Preference number: 6 (lower is better)
Translates to: VIMVCSLLLSNVGSN*SMALSRMCRSPLEA
Trigger: TGCTTCCAATGGGCTTCTGCACATCCTTGACAGAGCCATGGACAAGTTAGAACCCACATTTGAGAGCAACAATGAGCAAACCATAATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp CGGCCTGGTGCGACGGTGGTGCAATTTGCATTCCTATaGCACGGGTTATCTGATTTACATATATCAGTCATA +
Preference number: 6 (lower is better)
Translates to: RPGATVVQFAFL*HGLSDLHISVI
Trigger: TATGACTGATATATGTAAATCAGATAACCCGTGTCATAGGAATGCAAATTGCACCACCGTCGCACCAGGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp CATTCTCTCGTAATGACGGTTCTCACACATTTTGGCTaGCACCCAATAAACAGGGTTCGTCTTCCCATGAAA +
Preference number: 6 (lower is better)
Translates to: HSLVMTVLTHFG*HPINRVRLPMK
Trigger: TTTCATGGGAAGACGAACCCTGTTTATTGGGTGCCAGCCAAAATGTGTGAGAACCGTCATTACGAGAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp TTCAAATACTCCTTCAGCTTGTCCTTGTTGTCTTGGTaGAACAGGAAGTCCTGTTGTTCAGCAGGTAGGGCA +
Preference number: 6 (lower is better)
Translates to: FKYSFSLSLLSW*NRKSCCSAGRA
Trigger: TGCCCTACCTGCTGAACAACAGGACTTCCTGTTCAACCAAGACAACAAGGACAAGCTGAAGGAGTATTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp TGCCAATGGATGACATTTCCCGGTTTGTTCCAAGCATaGAGTTATTGGTTCACAGTCAATCCCATTTCCTCG +
Preference number: 6 (lower is better)
Translates to: CQWMTFPGLFQA*SYWFTVNPISS
Trigger: CGAGGAAATGGGATTGACTGTGAACCAATAACTTCATGCTTGGAACAAACCGGGAAATGTCATCCATTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp TCCGAGATCCCTCTGGAGAAAGGAGGTAATCGAGAGTaGCGTCCTTCATGTTATTCAATGCTTCATTATTTG +
Preference number: 6 (lower is better)
Translates to: SEIPLEKGGNRE*RPSCYSMLHYL
Trigger: CAAATAATGAAGCATTGAATAACATGAAGGACGGCACTCTCGATTACCTCCTTTCTCCAGAGGGATCTCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp AACTTCAAATACTCCTTCAGCTTGTCCTTGTTGTCTTaGTTGAACAGGAAGTCCTGTTGTTCAGCAGGTAGG +
Preference number: 6 (lower is better)
Translates to: NFKYSFSLSLLS*LNRKSCCSAGR
Trigger: CCTACCTGCTGAACAACAGGACTTCCTGTTCAACCAAGACAACAAGGACAAGCTGAAGGAGTATTTGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp TTGTCCATGGCTCTGTCAAGGATGTGCAGAAGCCCATaGGAAGCAATGATGTCCCCTTGTATAATTTTTACC +
Preference number: 6 (lower is better)
Translates to: LSMALSRMCRSP*EAMMSPCIIFT
Trigger: GGTAAAAATTATACAAGGGGACATCATTGCTTCCAATGGGCTTCTGCACATCCTTGACAGAGCCATGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp TTGCAAGTACAAGTCCTTTCTACTTGCCCAGTGTGGTaGCAGATGGCAAATTCACTACAGCCGCCATTTTTA +
Preference number: 6 (lower is better)
Translates to: LQVQVLSTCPVW*QMANSLQPPFL
Trigger: TAAAAATGGCGGCTGTAGTGAATTTGCCATCTGCAACCACACTGGGCAAGTAGAAAGGACTTGTACTTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp AGCCATGGATCACTCCCTTATCAGTGGCTACATTGGTGTAGTTTATaGGAGCCTCATTTACATAGAGCTGGTCATTATGGAGAAAGAAGC +
Preference number: 6 (lower is better)
Translates to: SHGSLPYQWLHWCSL*EPHLHRAGHYGERS
Trigger: GCTTCTTTCTCCATAATGACCAGCTCTATGTAAATGAGGCTCCAATAAACTACACCAATGTAGCCACTGATAAGGGAGTGATCCATGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp CTCCTGTCAGTGTGTAAATTCGGCCATTTTTGGCAGTaGTCTCAATTTCTTCCATTGCCACATCATTTGCCA +
Preference number: 6 (lower is better)
Translates to: LLSVCKFGHFWQ*SQFLPLPHHLP
Trigger: TGGCAAATGATGTGGCAATGGAAGAAATTGAGATCACTGCCAAAAATGGCCGAATTTACACACTGACAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS GCA 72 bp GACACGGGTTATCTGATTTACATATATCAGTCATACTaGACCCCACTCCAGGTACGAAATTCTGGTAATGCT +
Preference number: 6 (lower is better)
Translates to: DTGYLIYIYQSY*TPLQVRNSGNA
Trigger: AGCATTACCAGAATTTCGTACCTGGAGTGGGGTGCAGTATGACTGATATATGTAAATCAGATAACCCGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CCA 72 bp GAACTTTTCCCAAGCCATGGATCACTCCCTTATCAGTaGCTACATTGGTGTAGTTTATTGGAGCCTCATTTA +
Preference number: 6 (lower is better)
Translates to: ELFPSHGSLPYQ*LHWCSLLEPHL
Trigger: TAAATGAGGCTCCAATAAACTACACCAATGTAGCCACTGATAAGGGAGTGATCCATGGCTTGGGAAAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp CCTAGTAGCATATGGTACTTTATTAGGGCTGGAATATaGCTCTGTGACAACCAGAAGCTTTTCTCATCCTGG +
Preference number: 6 (lower is better)
Translates to: PSSIWYFIRAGI*LCDNQKLFSSW
Trigger: CCAGGATGAGAAAAGCTTCTGGTTGTCACAGAGCAATATTCCAGCCCTAATAAAGTACCATATGCTACTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp TTGCCAATGGATGACATTTCCCGGTTTGTTCCAAGCATGAAGTTATaGGTTCACAGTCAATCCCATTTCCTCGAAATCCTTTCTTGCACT +
Preference number: 6 (lower is better)
Translates to: LPMDDISRFVPSMKL*VHSQSHFLEILSCT
Trigger: AGTGCAAGAAAGGATTTCGAGGAAATGGGATTGACTGTGAACCAATAACTTCATGCTTGGAACAAACCGGGAAATGTCATCCATTGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp GATGACATTTCCCGGTTTGTTCCAAGCATGAAGTTATaGGTTCACAGTCAATCCCATTTCCTCGAAATCCTT +
Preference number: 6 (lower is better)
Translates to: DDISRFVPSMKL*VHSQSHFLEIL
Trigger: AAGGATTTCGAGGAAATGGGATTGACTGTGAACCAATAACTTCATGCTTGGAACAAACCGGGAAATGTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp TCACTCCCTTATCAGTGGCTACATTGGTGTAGTTTATaGGAGCCTCATTTACATAGAGCTGGTCATTATGGA +
Preference number: 6 (lower is better)
Translates to: SLPYQWLHWCSL*EPHLHRAGHYG
Trigger: TCCATAATGACCAGCTCTATGTAAATGAGGCTCCAATAAACTACACCAATGTAGCCACTGATAAGGGAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp AATTCACTACAGCCGCCATTTTTAGTTAAGCAGACATaGATGAGTGTGCAGACCTTTCCATCTCCAGTGTAT +
Preference number: 6 (lower is better)
Translates to: NSLQPPFLVKQT*MSVQTFPSPVY
Trigger: ATACACTGGAGATGGAAAGGTCTGCACACTCATCAATGTCTGCTTAACTAAAAATGGCGGCTGTAGTGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS TCA 72 bp AGGCATGTCCCAAATTGGTTTCCTCTAACAAAGATCTaGACTTGCTGTACCTTGGTTGTAGCATTGTCATTA +
Preference number: 6 (lower is better)
Translates to: RHVPNWFPLTKI*TCCTLVVALSL
Trigger: TAATGACAATGCTACAACCAAGGTACAGCAAGTTCAGATCTTTGTTAGAGGAAACCAATTTGGGACATGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 72 bp TGTCCCAAATTGGTTTCCTCTAACAAAGATCTGAACTaGCTGTACCTTGGTTGTAGCATTGTCATTATGGTT +
Preference number: 6 (lower is better)
Translates to: CPKLVSSNKDLN*LYLGCSIVIMV
Trigger: AACCATAATGACAATGCTACAACCAAGGTACAGCAAGTTCAGATCTTTGTTAGAGGAAACCAATTTGGGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388887.7
CDS CAA 90 bp TTCGATGTTCATCTGACCAGCAATTATGTGGAGTTTCACAAAGTATaGAGCAGCTTTATTATCCACCAAAAGCTCATTTACATTGAATCC +
Preference number: 6 (lower is better)
Translates to: FDVHLTSNYVEFHKV*SSFIIHQKLIYIES
Trigger: GGATTCAATGTAAATGAGCTTTTGGTGGATAATAAAGCTGCTCAATACTTTGTGAAACTCCACATAATTGCTGGTCAGATGAACATCGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388887.7