Pregenerated sensors for SRR (Homo sapiens)
Ensembl gene IDs: ENSG00000167720Ensembl transcript IDs: ENST00000344595.10, ENST00000570662.2, ENST00000572709.5, ENST00000574229.1, ENST00000574987.1, ENST00000575840.5, ENST00000576620.5, ENST00000576848.1
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGTTAAACCAGTGGAACTaGGAACGAAGTGGGGCCGGA | + |
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Preference number: 2 (lower is better) Translates to: ARAGMTNQALAWVFKWTGLNQWN*ERSGAG Trigger: TCCGGCCCCACTTCGTTCTCAGTTCCACTGGTTTAA...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR GCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGAGCCTGTCAGTCCACTaGCCCATTTTGCAAGACTTT | + |
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Preference number: 2 (lower is better) Translates to: ARAGMTNQALAWVFKWTGSLSVH*PILQDF Trigger: AAAGTCTTGCAAAATGGGGCAGTGGACTGACAGGCT...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR TCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGTGCAGTGTTGCTAAATaGCTGTTGGGTTGGAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: ARAGMTNQALAWVFKWTGCSVAK*LLGWKS Trigger: TGACTTCCAACCCAACAGTCATTTAGCAACACTGCA...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR TCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGGAGGAGGATGGGATCTaGTTGCCTTTGTGGTATAAA | + |
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Preference number: 2 (lower is better) Translates to: ARAGMTNQALAWVFKWTGEEDGI*LPLWYK Trigger: TTTATACCACAAAGGCAATCAGATCCCATCCTCCTC...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR GCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGGATTCTAAGAGGATGTaGTGTGGTTTAAACCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: ARAGMTNQALAWVFKWTGDSKRM*CGLNQW Trigger: CCACTGGTTTAAACCACAGCACATCCTCTTAGAATC...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR TCA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAAAGGAAACACGGGATTTaGGACCATGTCTGCATTTCT | + |
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Preference number: 2 (lower is better) Translates to: SDWARAGMTNQALAWVFKRKHGI*DHVCIS Trigger: AGAAATGCAGACATGGTCTCAAATCCCGTGTTTCCT...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR GCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGAGGATGGGATCTGATTaGCTTTGTGGTATAAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: ARAGMTNQALAWVFKWTGRMGSD*LCGIKV Trigger: AACCTTTATACCACAAAGGCAATCAGATCCCATCCT...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR TCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGGGGCTAGGGCAGGGATaGCAAACCAGGCTCTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQGLGQG*QTRLLH Trigger: ATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCC...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR CCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGTTGTGGTATAAAGGTTaGGTTTACATTTTGTGGGTA | + |
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Preference number: 2 (lower is better) Translates to: ARAGMTNQALAWVFKWTGLWYKG*VYILWV Trigger: TACCCACAAAATGTAAACCCAACCTTTATACCACAA...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR GCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGATTCTGTCTTACCGGTaGCAGTCAGTACTCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQILSYR*QSVLQG Trigger: TCCCTGGAGTACTGACTGGCACCGGTAAGACAGAAT...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGATCTTAGCCTCAGATTaGGCTAGGGCAGGGATGACA | + |
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Preference number: 2 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQILASD*ARAGMT Trigger: TGTCATCCCTGCCCTAGCCCAATCTGAGGCTAAGAT...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR TCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGTTGACCGACTTGTTCTaGTGTCTTTCTAGGTACCCA | + |
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Preference number: 2 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQLTDLF*CLSRYP Trigger: TGGGTACCTAGAAAGACATCAGAACAAGTCGGTCAA...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR GCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGCATGGCCACATGAAATaGAGCTTTGATGGGAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQHGHMK*SFDGKL Trigger: TAGCTTCCCATCAAAGCTGCATTTCATGTGGCCATG...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGTATGAAGGAGGAGGATaGGATCTGATTGCCTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQYEGGG*DLIAFV Trigger: CACAAAGGCAATCAGATCCCATCCTCCTCCTTCATA...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR TCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGGGACTGGGCAATAAATaGAGACTTTGGCCTGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQGLGNK*RLWPVN Trigger: ATTTACAGGCCAAAGTCTTCATTTATTGCCCAGTCC...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGTGGGTTTACATTTTGTaGGTAAATGTTTCATCTTGG | + |
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Preference number: 2 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQWVYIL*VNVSSW Trigger: CCAAGATGAAACATTTACCCACAAAATGTAAACCCA...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR CAA 90 bp | TTGTTATACATCATTTCTCTTGAAGTACAAGTTTTCAAGAACCTATaGACAAGGTTAAGTGTGGGCTTACAGTTTACCAATCTTAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LLYIISLEVQVFKNL*TRLSVGLQFTNLSL Trigger: GAGGCTAAGATTGGTAAACTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAGAGAAATGATGTATAACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR CCA 72 bp | GTGTGGGCTTACAGTTTACCAATCTTAGCCTCAGATTaGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCA | + |
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Preference number: 3 (lower is better) Translates to: VWAYSLPILASD*ARAGMTNQALA Trigger: TGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGAGGCTAAGATTGGTAAACTGTAAGCCCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR CAA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGTGGTCTTTAATGTGTTaGATTCTAAGAGGATGTGCT | + |
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Preference number: 3 (lower is better) Translates to: ARAGMTNQALAWVFKWTGWSLMC*ILRGCA Trigger: AGCACATCCTCTTAGAATCAAACACATTAAAGACCA...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR CAA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGGGTTGGGTTTACATTTaGTGGGTAAATGTTTCATCT | + |
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Preference number: 3 (lower is better) Translates to: ARAGMTNQALAWVFKWTGGWVYI*WVNVSS Trigger: AGATGAAACATTTACCCACAAAATGTAAACCCAACC...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| 3UTR-3UTR CAA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGTGCATTTCTGCAGTGTaGCTAAATGACTGTTGGGTT | + |
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Preference number: 3 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQCISAV*LNDCWV Trigger: AACCCAACAGTCATTTAGCAACACTGCAGAAATGCA...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR TCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGGGGCTAGGGCAGGGATaGCAAACCAGGCTCTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: ARAGMTNQALAWVFKWTGGLGQG*QTRLLH Trigger: ATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCC...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR TCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGATTTGGCAGCATAGGTaGGAGCCTGGCCATGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: ARAGMTNQALAWVFKWTGIWQHR*EPGHGF Trigger: GAAACCATGGCCAGGCTCTCACCTATGCTGCCAAAT...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR GCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGGCTGGCCTTTCAGCCTaGTTCACCCAAGTTATGGAG | + |
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Preference number: 4 (lower is better) Translates to: ARAGMTNQALAWVFKWTGAGLSA*FTQVME Trigger: CTCCATAACTTGGGTGAAGCAGGCTGAAAGGCCAGC...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR CCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGAATACTGAGCACACATaGTTCTCAGCTCACCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: ARAGMTNQALAWVFKWTGNTEHT*FSAHRR Trigger: GCGCCGGTGAGCTGAGAACCATGTGTGCTCAGTATT...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR CCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGATCTTAGCCTCAGATTaGGCTAGGGCAGGGATGACA | + |
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Preference number: 4 (lower is better) Translates to: ARAGMTNQALAWVFKWTGILASD*ARAGMT Trigger: TGTCATCCCTGCCCTAGCCCAATCTGAGGCTAAGAT...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR TCA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATTAAACCAGTGGAACTaGGAACGAAGTGGGGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: SDWARAGMTNQALAWVFKLNQWN*ERSGAG Trigger: TCCGGCCCCACTTCGTTCTCAGTTCCACTGGTTTAA...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR CCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGCTCTCCCACACCAGCTaGGTTGCACACTTAATTTCA | + |
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Preference number: 4 (lower is better) Translates to: ARAGMTNQALAWVFKWTGLSHTS*VAHLIS Trigger: TGAAATTAAGTGTGCAACCCAGCTGGTGTGGGAGAG...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR TCA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGTTTCCACTGCTGTaGGTAACAACAGCTTTCGGC | + |
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Preference number: 4 (lower is better) Translates to: SDWARAGMTNQALAWVFKWFPLL*VTTAFG Trigger: GCCGAAAGCTGTTGTTACTCACAGCAGTGGAAACCA...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR GCA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAAATTCTGTCTTACCGGTaGCAGTCAGTACTCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SDWARAGMTNQALAWVFKILSYR*QSVLQG Trigger: TCCCTGGAGTACTGACTGGCACCGGTAAGACAGAAT...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR GCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGCATGGCCACATGAAATaGAGCTTTGATGGGAAGCTA | + |
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Preference number: 4 (lower is better) Translates to: ARAGMTNQALAWVFKWTGHGHMK*SFDGKL Trigger: TAGCTTCCCATCAAAGCTGCATTTCATGTGGCCATG...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR CCA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAAATCACTGCAGGCTCCTaGTTGGGATGTACCATGATG | + |
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Preference number: 4 (lower is better) Translates to: SDWARAGMTNQALAWVFKITAGS*LGCTMM Trigger: CATCATGGTACATCCCAACCAGGAGCCTGCAGTGAT...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR TCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGGGACTGGGCAATAAATaGAGACTTTGGCCTGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: ARAGMTNQALAWVFKWTGGLGNK*RLWPVN Trigger: ATTTACAGGCCAAAGTCTTCATTTATTGCCCAGTCC...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR CCA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAAAACCAGGCTCTTGCATaGGTCTTTAAATGGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: SDWARAGMTNQALAWVFKNQALA*VFKWTG Trigger: CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTT...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR TCA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAAAGCCAATGCTGGATTTaGCACCATCTGCTATGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SDWARAGMTNQALAWVFKSQCWI*HHLLWF Trigger: AAACCATAGCAGATGGTGTCAAATCCAGCATTGGCT...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR TCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGCTACATTTCCACCACTaGGCACAATACAAATGTTCT | + |
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Preference number: 4 (lower is better) Translates to: ARAGMTNQALAWVFKWTGLHFHH*AQYKCS Trigger: AGAACATTTGTATTGTGCTCAGTGGTGGAAATGTAG...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR GCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGAGCCTTAACTGTAATTaGTATTCCAGCAAGCATTCC | + |
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Preference number: 4 (lower is better) Translates to: ARAGMTNQALAWVFKWTGSLNCN*YSSKHS Trigger: GGAATGCTTGCTGGAATAGCAATTACAGTTAAGGCT...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR CCA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAAAGCACTGGTGTGAGGTaGATAGAATCTCGAATGTTG | + |
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Preference number: 4 (lower is better) Translates to: SDWARAGMTNQALAWVFKSTGVR*IESRML Trigger: CAACATTCGAGATTCTATCCACCTCACACCAGTGCT...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR CCA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATATGAAGGAGGAGGATaGGATCTGATTGCCTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: SDWARAGMTNQALAWVFKYEGGG*DLIAFV Trigger: CACAAAGGCAATCAGATCCCATCCTCCTCCTTCATA...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR TCA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATTGCGCCCTGTTAGTTaGTTCAAAATGGAGCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: SDWARAGMTNQALAWVFKLRPVS*FKMELV Trigger: AACAAGCTCCATTTTGAATCAACTAACAGGGCGCAA...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR TCA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATTCACAGTATACAATTaGCGCTCCGTAGGCTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: SDWARAGMTNQALAWVFKFTVYN*RSVGLY Trigger: ATACAAGCCTACGGAGCGTCAATTGTATACTGTGAA...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR GCA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAAGGATTTGACACCATCTaGTATGGTTTCTGGAGGATA | + |
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Preference number: 4 (lower is better) Translates to: SDWARAGMTNQALAWVFKGFDTI*YGFWRI Trigger: TATCCTCCAGAAACCATAGCAGATGGTGTCAAATCC...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR CCA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGTTAGTTGATTCAAAATaGAGCTTGTTAGCACTGGTG | + |
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Preference number: 4 (lower is better) Translates to: ARAGMTNQALAWVFKWTGLVDSK*SLLALV Trigger: CACCAGTGCTAACAAGCTCCATTTTGAATCAACTAA...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR CCA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAAGCTTCACCCAAGTTATaGAGGAGGTTAAGTCTACAT | + |
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Preference number: 4 (lower is better) Translates to: SDWARAGMTNQALAWVFKASPKL*RRLSLH Trigger: ATGTAGACTTAACCTCCTCCATAACTTGGGTGAAGC...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR CCA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAAATCTGCTATGGTTTCTaGAGGATAAAGATTGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: SDWARAGMTNQALAWVFKICYGF*RIKIGH Trigger: ATGCCCAATCTTTATCCTCCAGAAACCATAGCAGAT...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR TCA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATCTCGAATGTTGATATaGGCTTTTTCAACATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SDWARAGMTNQALAWVFKSRMLI*AFSTSA Trigger: TGCTGATGTTGAAAAAGCTCATATCAACATTCGAGA...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR CCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGTCCACCAAAGGAACCTaGTTCAGCACTTCCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQSTKGT*FSTSRA Trigger: TGCCCTGGAAGTGCTGAACCAGGTTCCTTTGGTGGA...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS-3UTR GCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGTACAGGTACCACCAGTaGATCCACCAAAGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQYRYHQ*IHQRNL Trigger: CAGGTTCCTTTGGTGGATGCACTGGTGGTACCTGTA...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS-3UTR CCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGGTTTCCCCTTCAGCTTaGACTGGTAGCAGTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQVSPSA*TGSSHL Trigger: CAGATGACTGCTACCAGTCCAAGCTGAAGGGGAAAC...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR CCA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGGTTTACATTTTGTaGGTAAATGTTTCATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDWARAGMTNQALAWVFKWVYIL*VNVSSW Trigger: CCAAGATGAAACATTTACCCACAAAATGTAAACCCA...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS-3UTR TCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGAAGGAGATGCAATACTaGGCACACATGGTTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQKEMQY*AHMVLS Trigger: GCTGAGAACCATGTGTGCTCAGTATTGCATCTCCTT...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS-3UTR TCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGGCAGTCATCTGCATTTaGGGGTTCAGCAGCATATAC | + |
|
Preference number: 4 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQAVICI*GFSSIY Trigger: GTATATGCTGCTGAACCCTCAAATGCAGATGACTGC...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS-3UTR GCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGAGCCTGTCAGTCCACTaGCCCATTTTGCAAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQSLSVH*PILQDF Trigger: AAAGTCTTGCAAAATGGGGCAGTGGACTGACAGGCT...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS-3UTR CCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGAGACTGATAAGAAGCTaGCCTTTCAGCCTGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQRLIRS*PFSLLH Trigger: GTGAAGCAGGCTGAAAGGCCAGCTTCTTATCAGTCT...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS-3UTR TCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGGGAAGAGTTCACATTTaGAGAAAAGATTGCGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQGRVHI*RKDCAL Trigger: CAGGGCGCAATCTTTTCTTCAAATGTGAACTCTTCC...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS-3UTR TCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGTGCAGTGTTGCTAAATaGCTGTTGGGTTGGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQCSVAK*LLGWKS Trigger: TGACTTCCAACCCAACAGTCATTTAGCAACACTGCA...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS-3UTR TCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGAGGAAACACGGGATTTaGGACCATGTCTGCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQRKHGI*DHVCIS Trigger: AGAAATGCAGACATGGTCTCAAATCCCGTGTTTCCT...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS-3UTR TCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGGAGGAGGATGGGATCTaGTTGCCTTTGTGGTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQEEDGI*LPLWYK Trigger: TTTATACCACAAAGGCAATCAGATCCCATCCTCCTC...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS-3UTR GCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGCATCAGCAAAGGAGATaGAATACTGAGCACACATGG | + |
|
Preference number: 4 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQHQQRR*NTEHTW Trigger: CCATGTGTGCTCAGTATTGCATCTCCTTTGCTGATG...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS-3UTR GCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGCAGTCCTCAAATAACTaGCTTTTGTTCAACATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQQSSNN*LLFNIL Trigger: AAGGATGTTGAACAAAAGGCAGTTATTTGAGGACTG...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS-3UTR CCA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGTTGTGGTATAAAGGTTaGGTTTACATTTTGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQLWYKG*VYILWV Trigger: TACCCACAAAATGTAAACCCAACCTTTATACCACAA...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| 3UTR CAA 72 bp | ATCATTTCTCTTGAAGTACAAGTTTTCAAGAACCTATaGACAAGGTTAAGTGTGGGCTTACAGTTTACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: IISLEVQVFKNL*TRLSVGLQFTN Trigger: ATTGGTAAACTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAGAGAAATGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS-3UTR CAA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGACTGCAGGCTCCTGGTaGGGATGTACCATGATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ARAGMTNQALAWVFKWTGTAGSW*GCTMMP Trigger: AGGCATCATGGTACATCCCAACCAGGAGCCTGCAGT...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS GCA 90 bp | CTGGTTCAGCACTTCCAGGGCAATTGTCCCTTGTCCAGCTATCACTaGAGGCTCCTGGTTGGGATGTACCATGATGCCTTCTGTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVQHFQGNCPLSSYH*RLLVGMYHDAFCFF Trigger: GAAGAAACAGAAGGCATCATGGTACATCCCAACCAGGAGCCTGCAGTGATAGCTGGACAAGGGACAATTGCCCTGGAAGTGCTGAACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344595.10 ENST00000574987.1 |
||
| CDS TCA 90 bp | CATCAGTTTCCCCTTCAGCTTGGACTGGTAGCAGTCATCTGCATTTaGGGGTTCAGCAGCATATACCTTCACACTAGGTTTCAGAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HQFPLQLGLVAVICI*GFSSIYLHTRFQSL Trigger: GAGGCTCTGAAACCTAGTGTGAAGGTATATGCTGCTGAACCCTCAAATGCAGATGACTGCTACCAGTCCAAGCTGAAGGGGAAACTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000576848.1 |
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| CDS GCA 90 bp | CAAAGGAGATGCAATACTGAGCACACATGGTTCTCTGCTGCTTTCTaGACGTCGGCTTCTTTTTCACACAGGCGAGTTGGTTCCATATGG | + |
|
Preference number: 5 (lower is better) Translates to: QRRCNTEHTWFSAAF*TSASFSHRRVGSIW Trigger: CCATATGGAACCAACTCGCCTGTGTGAAAAAGAAGCCGACGTGCAGAAAGCAGCAGAGAACCATGTGTGCTCAGTATTGCATCTCCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000575840.5 |
||
| CDS-3UTR CAA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGTGCATTTCTGCAGTGTaGCTAAATGACTGTTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ARAGMTNQALAWVFKWTGCISAV*LNDCWV Trigger: AACCCAACAGTCATTTAGCAACACTGCAGAAATGCA...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS TCA 90 bp | CATCAGTTTCCCCTTCAGCTTGGACTGGTAGCAGTCATCTGCATTTaGGGGTTCAGCAGCATATACCTTCACACTAGGTTTCAGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HQFPLQLGLVAVICI*GFSSIYLHTRFQSL Trigger: AAGGCTCTGAAACCTAGTGTGAAGGTATATGCTGCTGAACCCTCAAATGCAGATGACTGCTACCAGTCCAAGCTGAAGGGGAAACTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344595.10 ENST00000574987.1 |
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| CDS CCA 90 bp | GGTGTTCAAGCCAATGCTGGATTTGACACCATCTGCTATGGTTTCTaGAGGATAAAGATTGGGCATCAGTTTCCCCTTCAGCTTGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: GVQANAGFDTICYGF*RIKIGHQFPLQLGL Trigger: CAGTCCAAGCTGAAGGGGAAACTGATGCCCAATCTTTATCCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTGGCTTGAACACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344595.10 ENST00000576848.1 |
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| CDS-3UTR CAA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAAGTTCACAGTATACAATaGACGCTCCGTAGGCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SDWARAGMTNQALAWVFKVHSIQ*TLRRLV Trigger: TACAAGCCTACGGAGCGTCAATTGTATACTGTGAAC...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR CAA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAAAACAGTTTGAAAATGTaGAGACAGCACAGCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SDWARAGMTNQALAWVFKNSLKM*RQHSSH Trigger: GTGGCTGCTGTGCTGTCTCAACATTTTCAAACTGTT...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS CCA 90 bp | TGGTTTCTGGAGGATAAAGATTGGGCATCAGTTTCCCCTTCAGCTTaGACTGGTAGCAGTCATCTGCATTTGAGGGTTCAGCAGCATATA | + |
|
Preference number: 5 (lower is better) Translates to: WFLEDKDWASVSPSA*TGSSHLHLRVQQHI Trigger: TATATGCTGCTGAACCCTCAAATGCAGATGACTGCTACCAGTCCAAGCTGAAGGGGAAACTGATGCCCAATCTTTATCCTCCAGAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344595.10 ENST00000576848.1 |
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| CDS-3UTR CAA 90 bp | GCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAATGGACTGGGTCAAATAACTGCCTTTaGTTCAACATCCTTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ARAGMTNQALAWVFKWTGSNNCL*FNILSL Trigger: CAAGGAAAGGATGTTGAACAAAAGGCAGTTATTTGA...CCCAGTCCATTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS GCA 90 bp | GATAATAGGCCAGGTGTTCAAGCCAATGCTGGATTTGACACCATCTaGTATGGTTTCTGGAGGATAAAGATTGGGCATCAGTTTCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: DNRPGVQANAGFDTI*YGFWRIKIGHQFPL Trigger: AAGGGGAAACTGATGCCCAATCTTTATCCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTGGCTTGAACACCTGGCCTATTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344595.10 ENST00000576848.1 |
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| CDS-3UTR CAA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGCAGGGCAATTGTCCCTaGTCCAGCTATCACTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQQGNCP*SSYHCR Trigger: CCTGCAGTGATAGCTGGACAAGGGACAATTGCCCTG...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR CAA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGGCACTTCCAGGGCAATaGTCCCTTGTCCAGCTATCA | + |
|
Preference number: 5 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQALPGQ*SLVQLS Trigger: TGATAGCTGGACAAGGGACAATTGCCCTGGAAGTGC...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS-3UTR CAA 90 bp | TCAGATTGGGCTAGGGCAGGGATGACAAACCAGGCTCTTGCATGGGTCTTTAAAGGTTGGGTTTACATTTaGTGGGTAAATGTTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SDWARAGMTNQALAWVFKGWVYI*WVNVSS Trigger: AGATGAAACATTTACCCACAAAATGTAAACCCAACC...TTTAAAGACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS TCA 90 bp | TTTCAACATCAGCAAAGGAGATGCAATACTGAGCACACATGGTTCTaGAACCCAGGAATAAGAAAGGGGTCAAAGCAAAGTCTGAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: FQHQQRRCNTEHTWF*NPGIRKGSKQSLRQ Trigger: CTGTCTCAGACTTTGCTTTGACCCCTTTCTTATTCCTGGGTTTCAGAACCATGTGTGCTCAGTATTGCATCTCCTTTGCTGATGTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574229.1 |
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| CDS CCA 90 bp | GTCTACATTTCCACCACTGAGCACAATACAAATGTTCTTTACTTCTaGGGAAACAGTTTGAAAATGTTGAGACAGCACAGCAGCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: VYISTTEHNTNVLYF*GNSLKMLRQHSSHS Trigger: GGAGTGGCTGCTGTGCTGTCTCAACATTTTCAAACTGTTTCCCCAGAAGTAAAGAACATTTGTATTGTGCTCAGTGGTGGAAATGTAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344595.10 ENST00000576848.1 |
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| CDS-3UTR CAA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGAAGCTTCTGACGGCATaGAGAGCACCACGAATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQKLLTA*RAPRIL Trigger: TAAGATTCGTGGTGCTCTCAATGCCGTCAGAAGCTT...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
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| CDS TCA 90 bp | TTCTGGAAGAGTTCACATTTGAAGAAAAGATTGCGCCCTGTTAGTTaGTTCAAAATGGAGCTTGTTAGCACTGGTGTGAGGTGGATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FWKSSHLKKRLRPVS*FKMELVSTGVRWIE Trigger: TTCTATCCACCTCACACCAGTGCTAACAAGCTCCATTTTGAATCAACTAACAGGGCGCAATCTTTTCTTCAAATGTGAACTCTTCCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000344595.10 ENST00000570662.2 ENST00000572709.5 ENST00000574229.1 ENST00000575840.5 ENST00000576620.5 |
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| CDS TCA 90 bp | GCTTCACCCAAGTTATGGAGGAGGTTAAGTCTACATTTCCACCACTaGGCACAATACAAATGTTCTTTACTTCTGGGGAAACAGTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASPKLWRRLSLHFHH*AQYKCSLLLGKQFE Trigger: TTCAAACTGTTTCCCCAGAAGTAAAGAACATTTGTATTGTGCTCAGTGGTGGAAATGTAGACTTAACCTCCTCCATAACTTGGGTGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344595.10 ENST00000576848.1 |
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| CDS-3UTR CAA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGAGCAGTCATCTGCATTaGAGGGTTCAGCAGCATATA | + |
|
Preference number: 5 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQSSHLH*RVQQHI Trigger: TATATGCTGCTGAACCCTCAAATGCAGATGACTGCT...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS-3UTR CAA 90 bp | CTTGAAGTACAAGTTTTCAAGAACCTATTGACAAGGTTAAGTGTGGGCTTACAGTGGTCTTTAATGTGTTaGATTCTAAGAGGATGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LEVQVFKNLLTRLSVGLQWSLMC*ILRGCA Trigger: AGCACATCCTCTTAGAATCAAACACATTAAAGACCA...CTGTAAGCCCACACTTAACCTTGTCAATAGGTTCTTGAAAACTTGTACTTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344595.10 |
||
| CDS CAA 72 bp | CTTTCTAAAGCATCAGGAACCAAGCTTCTGACGGCATaGAGAGCACCACGAATCTCAGCTCACCGGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LSKASGTKLLTA*RAPRISAHRRR Trigger: GCGGCGCCGGTGAGCTGAGATTCGTGGTGCTCTCAATGCCGTCAGAAGCTTGGTTCCTGATGCTTTAGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574987.1 |
||
| CDS CAA 90 bp | CCAGTGCATCCACCAAAGGAACCTGGTTCAGCACTTCCAGGGCAATaGTCCCTTGTCCAGCTATCACTGCAGGCTCCTGGTTGGGATGTA | + |
|
Preference number: 6 (lower is better) Translates to: PVHPPKEPGSALPGQ*SLVQLSLQAPGWDV Trigger: TACATCCCAACCAGGAGCCTGCAGTGATAGCTGGACAAGGGACAATTGCCCTGGAAGTGCTGAACCAGGTTCCTTTGGTGGATGCACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344595.10 ENST00000574987.1 |
||
| CDS GCA 72 bp | AGCAAGCATTCCTCCTCCACCTACAGGTACCACCAGTaGATCCACCAAAGGAACCTGGTTCAGCACTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SKHSSSTYRYHQ*IHQRNLVQHFQ Trigger: CTGGAAGTGCTGAACCAGGTTCCTTTGGTGGATGCACTGGTGGTACCTGTAGGTGGAGGAGGAATGCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344595.10 ENST00000574987.1 |
||
| CDS GCA 72 bp | TGCAATACTGAGCACACATGGTTCTCTGCTGCTTTCTaGACGTCGGCTTCTTTTTCACACAGGCGAGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: CNTEHTWFSAAF*TSASFSHRRVG Trigger: ACCAACTCGCCTGTGTGAAAAAGAAGCCGACGTGCAGAAAGCAGCAGAGAACCATGTGTGCTCAGTATTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000575840.5 |
||
| CDS TCA 72 bp | CCCCTTCAGCTTGGACTGGTAGCAGTCATCTGCATTTaGGGGTTCAGCAGCATATACCTTCACACTAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PLQLGLVAVICI*GFSSIYLHTRF Trigger: AAACCTAGTGTGAAGGTATATGCTGCTGAACCCTCAAATGCAGATGACTGCTACCAGTCCAAGCTGAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000344595.10 ENST00000574987.1 ENST00000576848.1 |
||
| CDS CCA 72 bp | GAGGATAAAGATTGGGCATCAGTTTCCCCTTCAGCTTaGACTGGTAGCAGTCATCTGCATTTGAGGGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: EDKDWASVSPSA*TGSSHLHLRVQ Trigger: CTGAACCCTCAAATGCAGATGACTGCTACCAGTCCAAGCTGAAGGGGAAACTGATGCCCAATCTTTATCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344595.10 ENST00000576848.1 |
||
| CDS GCA 72 bp | CCAGGTGTTCAAGCCAATGCTGGATTTGACACCATCTaGTATGGTTTCTGGAGGATAAAGATTGGGCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGVQANAGFDTI*YGFWRIKIGHQ Trigger: CTGATGCCCAATCTTTATCCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTGGCTTGAACACCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344595.10 ENST00000576848.1 |
||
| CDS CCA 72 bp | GCCAATGCTGGATTTGACACCATCTGCTATGGTTTCTaGAGGATAAAGATTGGGCATCAGTTTCCCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: ANAGFDTICYGF*RIKIGHQFPLQ Trigger: CTGAAGGGGAAACTGATGCCCAATCTTTATCCTCCAGAAACCATAGCAGATGGTGTCAAATCCAGCATTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344595.10 ENST00000576848.1 |
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| CDS TCA 72 bp | CAGCAAAGGAGATGCAATACTGAGCACACATGGTTCTaGAACCCAGGAATAAGAAAGGGGTCAAAGCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: QQRRCNTEHTWF*NPGIRKGSKQS Trigger: ACTTTGCTTTGACCCCTTTCTTATTCCTGGGTTTCAGAACCATGTGTGCTCAGTATTGCATCTCCTTTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574229.1 |
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| CDS CAA 72 bp | CTTTCTAAAGCATCAGGAACCAAGCTTCTGACGGCATaGAGAGCACCACGAATCTTAAAAGATCCTGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LSKASGTKLLTA*RAPRILKDPVF Trigger: GAAAACAGGATCTTTTAAGATTCGTGGTGCTCTCAATGCCGTCAGAAGCTTGGTTCCTGATGCTTTAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000344595.10 ENST00000570662.2 ENST00000575840.5 ENST00000576620.5 |
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| CDS CAA 90 bp | CACAATACAAATGTTCTTTACTTCTGGGGAAACAGTTTGAAAATGTaGAGACAGCACAGCAGCCACTCCAACACCAGCTGTAGGTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: HNTNVLYFWGNSLKM*RQHSSHSNTSCRFN Trigger: ATTGAACCTACAGCTGGTGTTGGAGTGGCTGCTGTGCTGTCTCAACATTTTCAAACTGTTTCCCCAGAAGTAAAGAACATTTGTATTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344595.10 ENST00000576848.1 |
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| CDS TCA 72 bp | AGTTCACATTTGAAGAAAAGATTGCGCCCTGTTAGTTaGTTCAAAATGGAGCTTGTTAGCACTGGTGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SSHLKKRLRPVS*FKMELVSTGVR Trigger: CCTCACACCAGTGCTAACAAGCTCCATTTTGAATCAACTAACAGGGCGCAATCTTTTCTTCAAATGTGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000344595.10 ENST00000570662.2 ENST00000572709.5 ENST00000574229.1 ENST00000575840.5 ENST00000576620.5 |
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| CDS TCA 72 bp | ACTGGTGTGAGGTGGATAGAATCTCGAATGTTGATATaGGCTTTTTCAACATCAGCAAAGGAGATGCAATAC | + |
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Preference number: 6 (lower is better) Translates to: TGVRWIESRMLI*AFSTSAKEMQY Trigger: GTATTGCATCTCCTTTGCTGATGTTGAAAAAGCTCATATCAACATTCGAGATTCTATCCACCTCACACCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000344595.10 ENST00000570662.2 ENST00000572709.5 ENST00000574229.1 ENST00000575840.5 ENST00000576620.5 |
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| CDS TCA 72 bp | AAGTTATGGAGGAGGTTAAGTCTACATTTCCACCACTaGGCACAATACAAATGTTCTTTACTTCTGGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: KLWRRLSLHFHH*AQYKCSLLLGK Trigger: TTTCCCCAGAAGTAAAGAACATTTGTATTGTGCTCAGTGGTGGAAATGTAGACTTAACCTCCTCCATAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344595.10 ENST00000576848.1 |
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