Pregenerated sensors for SPZ1 (Homo sapiens)
Ensembl gene IDs: ENSG00000164299Ensembl transcript IDs: ENST00000296739.6, ENST00000511881.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTTCTATAGCTCTTTCTTaGTTGAACCAGCAGATCTGC | + |
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Preference number: 2 (lower is better) Translates to: YELDVDTMVIKDQTYITASIALS*LNQQIC Trigger: GCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGA...AGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| 3UTR-3UTR TCA 90 bp | AAGGTGAAAAGTTATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTATGATTGATCATGACTaGCAAGTTGGAGGTAACAGA | + |
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Preference number: 2 (lower is better) Translates to: KVKSYELDVDTMVIKDQTMIDHD*QVGGNR Trigger: TCTGTTACCTCCAACTTGTCAGTCATGATCAATCAT...AGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATAACTTTTCACCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| 3UTR-3UTR CAA 90 bp | CTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTGAAGTAATAGCTCTTTCTTGGTaGAACCAGCAGATCTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: LDVDTMVIKDQTYITAEVIALSW*NQQICP Trigger: TGGGCAGATCTGCTGGTTCAACCAAGAAAGAGCTAT...TACTTCAGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| 3UTR-3UTR CAA 90 bp | AAGGTGAAAAGTTATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTTTCTATAGCTCTTTCTaGGTTGAACCAGCAGATCTG | + |
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Preference number: 3 (lower is better) Translates to: KVKSYELDVDTMVIKDQTFYSSF*VEPADL Trigger: CAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAA...AGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATAACTTTTCACCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| 3UTR-3UTR CAA 90 bp | AAGGTGAAAAGTTATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTATCATGACTGACAAGTaGGAGGTAACAGATGTAGTT | + |
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Preference number: 3 (lower is better) Translates to: KVKSYELDVDTMVIKDQTIMTDK*EVTDVV Trigger: AACTACATCTGTTACCTCCAACTTGTCAGTCATGAT...AGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATAACTTTTCACCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR TCA 90 bp | AAGTGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCGGTGGGCATCTCAGCTaGCTTAGCAGAGCTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: KCQSPYSIALSWLNQQICGGHLS*LSRAGH Trigger: ATGGCCAGCTCTGCTAAGTCAGCTGAGATGCCCACC...GCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CCA 90 bp | AAGTGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCTCTCAGACAGCCTTGTaGGGAGGAAGGGTGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: KCQSPYSIALSWLNQQICSQTAL*GGRVGK Trigger: CTTTCCCACCCTTCCTCCCCACAAGGCTGTCTGAGA...GCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR TCA 90 bp | AAGTGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCTCCAGGAAGGACAGGTaGTGGTCCTTTGTGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KCQSPYSIALSWLNQQICSRKDR*WSFVQM Trigger: CATTTGCACAAAGGACCATCACCTGTCCTTCCTGGA...GCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR TCA 90 bp | TGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCCCATGCCATCAACTGCAATaGATAGGTGTCATGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: CQSPYSIALSWLNQQICPCHQLQ*IGVMAQ Trigger: CTGAGCCATGACACCTATTCATTGCAGTTGATGGCA...TGGGCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR TCA 90 bp | TGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCCCAGATGATGGAGTTCCTTaGGAATCTCTACTCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: CQSPYSIALSWLNQQICPDDGVP*ESLLSA Trigger: AGCAGAGAGTAGAGATTCTCAAGGAACTCCATCATC...TGGGCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR GCA 90 bp | TGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCCCATGTTCCTCCAGCTCATaGTTAGCCGACACTTCATTA | + |
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Preference number: 4 (lower is better) Translates to: CQSPYSIALSWLNQQICPCSSSS*LADTSL Trigger: TAATGAAGTGTCGGCTAAGCATGAGCTGGAGGAACA...TGGGCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CCA 90 bp | AAGTGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCTGTTTAGGTGGAAGGTaGCATCTCAGACAGCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: KCQSPYSIALSWLNQQICCLGGR*HLRQPC Trigger: ACAAGGCTGTCTGAGATGCCACCTTCCACCTAAACA...GCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CCA 90 bp | TGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCCCACGACACTTCATTATTTaGCTGGGTTTGGAAACCGAC | + |
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Preference number: 4 (lower is better) Translates to: CQSPYSIALSWLNQQICPRHFII*LGLETD Trigger: GTCGGTTTCCAAACCCAGCCAAATAATGAAGTGTCG...TGGGCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CCA 90 bp | AAGTGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCTTGTGCAAATGTGGGTaGAGACTGTGGAATCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: KCQSPYSIALSWLNQQICLCKCG*RLWNQA Trigger: TGCTTGATTCCACAGTCTCCACCCACATTTGCACAA...GCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR GCA 90 bp | TGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCCCAGCTTCCTGTAGTAACTaGTCCATGTTGTTCCTAATT | + |
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Preference number: 4 (lower is better) Translates to: CQSPYSIALSWLNQQICPASCSN*SMLFLI Trigger: AATTAGGAACAACATGGAGCAGTTACTACAGGAAGC...TGGGCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CCA 90 bp | AAGTGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCACTTCATTATTTGGCTaGGTTTGGAAACCGACTCCA | + |
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Preference number: 4 (lower is better) Translates to: KCQSPYSIALSWLNQQICTSLFG*VWKPTP Trigger: TGGAGTCGGTTTCCAAACCCAGCCAAATAATGAAGT...GCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR GCA 90 bp | TGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCCCAGTACCCTTCATTGCTTaGTTGTTCTGCTTATACATT | + |
|
Preference number: 4 (lower is better) Translates to: CQSPYSIALSWLNQQICPVPFIA*LFCLYI Trigger: AATGTATAAGCAGAACAAGCAAGCAATGAAGGGTAC...TGGGCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CCA 90 bp | CTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTGAAGTAGAGATGATGTTTAGGTaGAAGGTGGCATCTCAGACA | + |
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Preference number: 4 (lower is better) Translates to: LDVDTMVIKDQTYITAEVEMMFR*KVASQT Trigger: TGTCTGAGATGCCACCTTCCACCTAAACATCATCTC...TACTTCAGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR TCA 90 bp | AAGTGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCGCTTTTCTTGCAACATaGATATTGAACTGGGTATTG | + |
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Preference number: 4 (lower is better) Translates to: KCQSPYSIALSWLNQQICAFLAT*ILNWVL Trigger: CAATACCCAGTTCAATATTCATGTTGCAAGAAAAGC...GCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR GCA 90 bp | TGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCCCACCTAAGAGCTTTTCTTaGAACATGAATATTGAACTG | + |
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Preference number: 4 (lower is better) Translates to: CQSPYSIALSWLNQQICPPKSFS*NMNIEL Trigger: CAGTTCAATATTCATGTTGCAAGAAAAGCTCTTAGG...TGGGCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CCA 90 bp | TATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTTCCTTTGTGCAAATGTaGGTGGAGACTGTGGAATCA | + |
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Preference number: 4 (lower is better) Translates to: YELDVDTMVIKDQTYITASFVQM*VETVES Trigger: TGATTCCACAGTCTCCACCCACATTTGCACAAAGGA...AGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR TCA 90 bp | CTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTGAAGTATGTTGTTCTGTAACTTaGTGGCTGCTATTCTTTAGG | + |
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Preference number: 4 (lower is better) Translates to: LDVDTMVIKDQTYITAEVCCSVT*WLLFFR Trigger: CCTAAAGAATAGCAGCCATCAAGTTACAGAACAACA...TACTTCAGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR TCA 90 bp | CTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTGAAGTAGCTTCTGATGGCTTCTaGTTTTTCTTGTCCTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: LDVDTMVIKDQTYITAEVASDGF*FFLSCL Trigger: TAAACAGGACAAGAAAAATCAGAAGCCATCAGAAGC...TACTTCAGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR TCA 90 bp | CTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTGAAGTAATGATTGATCATGACTaGCAAGTTGGAGGTAACAGA | + |
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Preference number: 4 (lower is better) Translates to: LDVDTMVIKDQTYITAEVMIDHD*QVGGNR Trigger: TCTGTTACCTCCAACTTGTCAGTCATGATCAATCAT...TACTTCAGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR GCA 90 bp | TATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTTCTTGCAAAAACTTGTaGGGTGTTCTCAGAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: YELDVDTMVIKDQTYITASCKNL*GVLRVL Trigger: CAGAACTCTGAGAACACCGCACAAGTTTTTGCAAGA...AGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR GCA 90 bp | CTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTGAAGTAATTTACCAAATCTCTTaGAAAAACTTGTGCGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: LDVDTMVIKDQTYITAEVIYQIS*KNLCGV Trigger: AACACCGCACAAGTTTTTGCAAGAGATTTGGTAAAT...TACTTCAGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR GCA 90 bp | TATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTAGAATCTCTACTCTCTaGTGTAAGATTTGGCATTCA | + |
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Preference number: 4 (lower is better) Translates to: YELDVDTMVIKDQTYITARISTL*CKIWHS Trigger: TGAATGCCAAATCTTACAGCAGAGAGTAGAGATTCT...AGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR GCA 90 bp | CTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTGAAGTAAAATGTACCCTTCATTaGTTGCTTGTTCTGCTTATA | + |
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Preference number: 4 (lower is better) Translates to: LDVDTMVIKDQTYITAEVKCTLH*LLVLLI Trigger: TATAAGCAGAACAAGCAAGCAATGAAGGGTACATTT...TACTTCAGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CCA 90 bp | TATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTTTATTTGGCTGGGTTTaGAAACCGACTCCATTATTT | + |
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Preference number: 4 (lower is better) Translates to: YELDVDTMVIKDQTYITALFGWV*KPTPLF Trigger: AAATAATGGAGTCGGTTTCCAAACCCAGCCAAATAA...AGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR GCA 90 bp | TATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTCTCAAAAAGTTCTTTTaGTTCTGTGATCTTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: YELDVDTMVIKDQTYITALKKFF*FCDLLF Trigger: GAAGAGAAGATCACAGAAGCAAAAGAACTTTTTGAG...AGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS TCA 90 bp | ATCAGGAGTAGGGTTAACGGTTTTGGAGATGGTGGGCATCTCAGCTaGCTTAGCAGAGCTGGCCATCAGGACAGAAGGAAAGCAGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: IRSRVNGFGDGGHLS*LSRAGHQDRRKAEN Trigger: GTTTTCTGCTTTCCTTCTGTCCTGATGGCCAGCTCTGCTAAGTCAGCTGAGATGCCCACCATCTCCAAAACCGTTAACCCTACTCCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000296739.6 ENST00000511881.1 |
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| CDS-3UTR CAA 90 bp | AAGGTGAAAAGTTATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTGCATCTCAGACAGCCTaGTGGGGAGGAAGGGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: KVKSYELDVDTMVIKDQTASQTA*WGGRVG Trigger: TCCCACCCTTCCTCCCCACAAGGCTGTCTGAGATGC...AGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATAACTTTTCACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS CCA 90 bp | GTGGAATCAAGCAGAAGTCAGAGACCAAAGTTAAGGATTAAAATTTaGGAGATGATGTTTAGGTGGAAGGTGGCATCTCAGACAGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: VESSRSQRPKLRIKI*EMMFRWKVASQTAL Trigger: CAAGGCTGTCTGAGATGCCACCTTCCACCTAAACATCATCTCCCAAATTTTAATCCTTAACTTTGGTCTCTGACTTCTGCTTGATTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CAA 90 bp | TGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCCCACTTCTGTGCAGTCTGTaGTTCTGTAACTTGATGGCT | + |
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Preference number: 5 (lower is better) Translates to: CQSPYSIALSWLNQQICPLLCSL*FCNLMA Trigger: AGCCATCAAGTTACAGAACAACAGACTGCACAGAAG...TGGGCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CAA 90 bp | CTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTGAAGTAACAGGTGATGGTCCTTaGTGCAAATGTGGGTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: LDVDTMVIKDQTYITAEVTGDGP*CKCGWR Trigger: TCTCCACCCACATTTGCACAAAGGACCATCACCTGT...TACTTCAGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CAA 90 bp | TGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCCCATTCTATAGCTCTTTCTaGGTTGAACCAGCAGATCTG | + |
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Preference number: 5 (lower is better) Translates to: CQSPYSIALSWLNQQICPFYSSF*VEPADL Trigger: CAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAA...TGGGCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CAA 90 bp | TATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTGTAGGGTTAACGGTTTaGGAGATGGTGGGCATCTCA | + |
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Preference number: 5 (lower is better) Translates to: YELDVDTMVIKDQTYITAVGLTV*EMVGIS Trigger: TGAGATGCCCACCATCTCCAAAACCGTTAACCCTAC...AGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CAA 90 bp | CTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTGAAGTACTGAATTGGCTTCTCTaGCAGAGTTCCCTGTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: LDVDTMVIKDQTYITAEVLNWLL*QSSLFL Trigger: CAGAAACAGGGAACTCTGCAAGAGAAGCCAATTCAG...TACTTCAGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CAA 90 bp | TGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCCCAATCATGACTGACAAGTaGGAGGTAACAGATGTAGTT | + |
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Preference number: 5 (lower is better) Translates to: CQSPYSIALSWLNQQICPIMTDK*EVTDVV Trigger: AACTACATCTGTTACCTCCAACTTGTCAGTCATGAT...TGGGCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CAA 90 bp | TATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTAGGGTCCAGATATTCTaGATGAGGATCAGGAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: YELDVDTMVIKDQTYITARVQIF*MRIRSR Trigger: CCTACTCCTGATCCTCATCAAGAATATCTGGACCCT...AGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CAA 90 bp | AAGTGTCAATCTCCTTATTCTATAGCTCTTTCTTGGTTGAACCAGCAGATCTGCATTATTTGGCTGGGTTaGGAAACCGACTCCATTATT | + |
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Preference number: 5 (lower is better) Translates to: KCQSPYSIALSWLNQQICIIWLG*ETDSII Trigger: AATAATGGAGTCGGTTTCCAAACCCAGCCAAATAAT...GCAGATCTGCTGGTTCAACCAAGAAAGAGCTATAGAATAAGGAGATTGACACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CAA 90 bp | TATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTCCGACACTTCATTATTaGGCTGGGTTTGGAAACCGA | + |
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Preference number: 5 (lower is better) Translates to: YELDVDTMVIKDQTYITAPTLHY*AGFGNR Trigger: TCGGTTTCCAAACCCAGCCAAATAATGAAGTGTCGG...AGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CAA 90 bp | TATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTATAGCTCTTTCTTGGTaGAACCAGCAGATCTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: YELDVDTMVIKDQTYITAIALSW*NQQICP Trigger: TGGGCAGATCTGCTGGTTCAACCAAGAAAGAGCTAT...AGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CAA 90 bp | TATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTATCTCTTGCAAAAACTaGTGCGGTGTTCTCAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: YELDVDTMVIKDQTYITAISCKN*CGVLRV Trigger: AACTCTGAGAACACCGCACAAGTTTTTGCAAGAGAT...AGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CAA 90 bp | CTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTGAAGTAGATTTACCAAATCTCTaGCAAAAACTTGTGCGGTGT | + |
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Preference number: 5 (lower is better) Translates to: LDVDTMVIKDQTYITAEVDLPNL*QKLVRC Trigger: ACACCGCACAAGTTTTTGCAAGAGATTTGGTAAATC...TACTTCAGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CAA 90 bp | TATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTTGCTTTTTCCTGACTTaGTTGAGTTTCGTTAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: YELDVDTMVIKDQTYITACFFLT*LSFVKD Trigger: GTCCTTAACGAAACTCAACAAAGTCAGGAAAAAGCA...AGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CAA 90 bp | TATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTTGTACCCTTCATTGCTaGCTTGTTCTGCTTATACAT | + |
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Preference number: 5 (lower is better) Translates to: YELDVDTMVIKDQTYITACTLHC*LVLLIH Trigger: ATGTATAAGCAGAACAAGCAAGCAATGAAGGGTACA...AGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CAA 90 bp | CTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTGAAGTAAAAATGTACCCTTCATaGCTTGCTTGTTCTGCTTAT | + |
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Preference number: 5 (lower is better) Translates to: LDVDTMVIKDQTYITAEVKMYPS*LACSAY Trigger: ATAAGCAGAACAAGCAAGCAATGAAGGGTACATTTT...TACTTCAGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS-3UTR CAA 90 bp | TATGAACTTGATGTAGACACAATGGTCATTAAAGACCAGACTTACATAACTGCTACATCCTCAGTAATATaGGTTTCCAATATCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: YELDVDTMVIKDQTYITATSSVI*VSNIIS Trigger: GGAGATGATATTGGAAACCAATATTACTGAGGATGT...AGCAGTTATGTAAGTCTGGTCTTTAATGACCATTGTGTCTACATCAAGTTCATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS CAA 72 bp | GACTCAACCGCAGCATGTTTTGACCACTTAAGGACATaGCTGAGACCAGTCCTCTCTGGTGAGGTCCCCATC | + |
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Preference number: 6 (lower is better) Translates to: DSTAACFDHLRT*LRPVLSGEVPI Trigger: GATGGGGACCTCACCAGAGAGGACTGGTCTCAGCAATGTCCTTAAGTGGTCAAAACATGCTGCGGTTGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511881.1 |
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| CDS TCA 72 bp | AGGGTTAACGGTTTTGGAGATGGTGGGCATCTCAGCTaGCTTAGCAGAGCTGGCCATCAGGACAGAAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: RVNGFGDGGHLS*LSRAGHQDRRK Trigger: TTTCCTTCTGTCCTGATGGCCAGCTCTGCTAAGTCAGCTGAGATGCCCACCATCTCCAAAACCGTTAACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296739.6 ENST00000511881.1 |
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| CDS CCA 72 bp | GGAAGGACAGGTGATGGTCCTTTGTGCAAATGTGGGTaGAGACTGTGGAATCAAGCAGAAGTCAGAGACCAA | + |
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Preference number: 6 (lower is better) Translates to: GRTGDGPLCKCG*RLWNQAEVRDQ Trigger: TTGGTCTCTGACTTCTGCTTGATTCCACAGTCTCCACCCACATTTGCACAAAGGACCATCACCTGTCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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| CDS TCA 72 bp | TTGTTAAACTTCTGTGCAGTCTGTTGTTCTGTAACTTaGTGGCTGCTATTCTTTAGGAAAGGGAGAGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: LLNFCAVCCSVT*WLLFFRKGREP Trigger: GGGCTCTCTCCCTTTCCTAAAGAATAGCAGCCATCAAGTTACAGAACAACAGACTGCACAGAAGTTTAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296739.6 ENST00000511881.1 |
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| CDS CCA 72 bp | AGCAGAAGTCAGAGACCAAAGTTAAGGATTAAAATTTaGGAGATGATGTTTAGGTGGAAGGTGGCATCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SRSQRPKLRIKI*EMMFRWKVASQ Trigger: CTGAGATGCCACCTTCCACCTAAACATCATCTCCCAAATTTTAATCCTTAACTTTGGTCTCTGACTTCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296739.6 |
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