Pregenerated sensors for SPTSSB (Homo sapiens)
Ensembl gene IDs: ENSG00000196542Ensembl transcript IDs: ENST00000359175.8, ENST00000497137.1, ENST00000497374.1, ENST00000617024.1
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTCTGCAAAGGAGCCACTATATCAAAGCATTTAACTGGAGCTGTTaGGTTCCTGCTGGTAGAATATTACTTCCAGCCTATTTATTAGCT | + |
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Preference number: 1 (lower is better) Translates to: ALQRSHYIKAFNWSC*VPAGRILLPAYLLA Trigger: AGCTAATAAATAGGCTGGAAGTAATATTCTACCAGCAGGAACTCAACAGCTCCAGTTAAATGCTTTGATATAGTGGCTCCTTTGCAGAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| 3UTR-3UTR TCA 90 bp | AAACTTGTGTCCAACCGCACTGCTCCCAGCGACTCCTTCCAGAAGAGAATGCCTAGCAACAGAGGCGGCTaGGGCGTCGCTGTCACCTCC | + |
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Preference number: 2 (lower is better) Translates to: KLVSNRTAPSDSFQKRMPSNRGG*GVAVTS Trigger: GGAGGTGACAGCGACGCCTCAGCCGCCTCTGTTGCT...AGGCATTCTCTTCTGGAAGGAGTCGCTGGGAGCAGTGCGGTTGGACACAAGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| 3UTR-3UTR GCA 90 bp | ACAAAAGGAAAACACTCCTACGCAAACTTGTGTCCAACCGCACTGCTCCCAGCGGTCACCTCCGGCTGCTaGAGTAAAACCCCGAGCCGA | + |
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Preference number: 2 (lower is better) Translates to: TKGKHSYANLCPTALLPAVTSGC*SKTPSR Trigger: TCGGCTCGGGGTTTTACTGCAGCAGCCGGAGGTGAC...CGCTGGGAGCAGTGCGGTTGGACACAAGTTTGCGTAGGAGTGTTTTCCTTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| 3UTR-3UTR GCA 90 bp | GCAAACTTGTGTCCAACCGCACTGCTCCCAGCGACTCCTTCCAGAAGAGAATGCTGGTCCTCGGAGGAATaGAGCCCAACGACTTCTACA | + |
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Preference number: 2 (lower is better) Translates to: ANLCPTALLPATPSRRECWSSEE*SPTTST Trigger: TGTAGAAGTCGTTGGGCTGCATTCCTCCGAGGACCA...GCATTCTCTTCTGGAAGGAGTCGCTGGGAGCAGTGCGGTTGGACACAAGTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| 3UTR-3UTR TCA 90 bp | CATACATTAATATTTATTGGGAGGAAAGCAAAACTGCAAAACGTAGTCTTTGGCTTTAACTGGAGCTGTTaGGTTCCTGCTGGTAGAATA | + |
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Preference number: 2 (lower is better) Translates to: HTLIFIGRKAKLQNVVFGFNWSC*VPAGRI Trigger: TATTCTACCAGCAGGAACTCAACAGCTCCAGTTAAA...GCCAAAGACTACGTTTTGCAGTTTTGCTTTCCTCCCAATAAATATTAATGTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| 3UTR TCA 72 bp | AGGGGAAGCCGGGGCTCCGAGAGCAACAGAGGCGGCTaGGGCGTCGCTGTCACCTCCGGCTGCTGCAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: RGSRGSESNRGG*GVAVTSGCCSK Trigger: TTTACTGCAGCAGCCGGAGGTGACAGCGACGCCTCAGCCGCCTCTGTTGCTCTCGGAGCCCCGGCTTCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| 3UTR CCA 72 bp | TCATACGCTGCCACTCTTAGTCCTGGGCGATCAGACTaGTCCTCGGAGGAATGCAGCCCAACGACTTCTACA | + |
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Preference number: 3 (lower is better) Translates to: SYAATLSPGRSD*SSEECSPTTST Trigger: TGTAGAAGTCGTTGGGCTGCATTCCTCCGAGGACCAGTCTGATCGCCCAGGACTAAGAGTGGCAGCGTATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| 3UTR GCA 72 bp | GAAAACACTCCTACGCAAACTTGTGTCCAACCGCACTaGTCCCAGCGACTCCTTCCAGAAGAGAATGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: ENTPTQTCVQPH*SQRLLPEENAC Trigger: GCAGGCATTCTCTTCTGGAAGGAGTCGCTGGGAGCAGTGCGGTTGGACACAAGTTTGCGTAGGAGTGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| 3UTR-3UTR CAA 90 bp | CTCTGCAAAGGAGCCACTATATCAAAGCATTTAACTGGAGCTGTTGAGTTCCTGAGCCTATTTATTAGCTaGTCTTCCGGTGGCCCAATA | + |
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Preference number: 3 (lower is better) Translates to: LCKGATISKHLTGAVEFLSLFIS*SSGGPI Trigger: TATTGGGCCACCGGAAGACAAGCTAATAAATAGGCT...CAGGAACTCAACAGCTCCAGTTAAATGCTTTGATATAGTGGCTCCTTTGCAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| 3UTR TCA 72 bp | AGGAGCCACTATATCAAAGCATTTAACTGGAGCTGTTaGGTTCCTGCTGGTAGAATATTACTTCCAGCCTAT | + |
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Preference number: 3 (lower is better) Translates to: RSHYIKAFNWSC*VPAGRILLPAY Trigger: ATAGGCTGGAAGTAATATTCTACCAGCAGGAACTCAACAGCTCCAGTTAAATGCTTTGATATAGTGGCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR GCA 90 bp | TTTCCCGGTGCAGGGGAAGCCGGGGCTCCGAGAGCAACAGAGGCGGCTGAGGCGGGGGCTGGCGTGCCCTaGGCTTACGCTCCGCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: FPGAGEAGAPRATEAAEAGAGVP*AYAPRS Trigger: CGAGCGCGGAGCGTAAGCGCAGGGCACGCCAGCCCC...CGCCTCAGCCGCCTCTGTTGCTCTCGGAGCCCCGGCTTCCCCTGCACCGGGAAA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR CCA 90 bp | TTTCCCGGTGCAGGGGAAGCCGGGGCTCCGAGAGCAACAGAGGCGGCTGAGGCGCTGGGGAAAGAAGGCTaGGAGGCGGCCCGGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: FPGAGEAGAPRATEAAEALGKEG*EAARWC Trigger: GCACCACCGGGCCGCCTCCCAGCCTTCTTTCCCCAG...CGCCTCAGCCGCCTCTGTTGCTCTCGGAGCCCCGGCTTCCCCTGCACCGGGAAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR TCA 90 bp | CCGGGGCTCCGAGAGCAACAGAGGCGGCTGAGGCGTCGCTGTCACCTCCGGCTGGAGAGCAGGGCTTGCTaGGAGTGGCGGAGGACCTTG | + |
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Preference number: 4 (lower is better) Translates to: PGLREQQRRLRRRCHLRLESRAC*EWRRTL Trigger: CAAGGTCCTCCGCCACTCTCAGCAAGCCCTGCTCTC...CAGCCGGAGGTGACAGCGACGCCTCAGCCGCCTCTGTTGCTCTCGGAGCCCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR TCA 90 bp | TTTCCCGGTGCAGGGGAAGCCGGGGCTCCGAGAGCAACAGAGGCGGCTGAGGCGAGCAACAGAGGCGGCTaGGGCGTCGCTGTCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: FPGAGEAGAPRATEAAEASNRGG*GVAVTS Trigger: GGAGGTGACAGCGACGCCTCAGCCGCCTCTGTTGCT...CGCCTCAGCCGCCTCTGTTGCTCTCGGAGCCCCGGCTTCCCCTGCACCGGGAAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR TCA 90 bp | CCGGTGCAGGGGAAGCCGGGGCTCCGAGAGCAACAGAGGCGGCTGAGGCGTCGCAGTGGCGGAGGACCTTaGAGGCTCCCGGTTCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: PVQGKPGLREQQRRLRRRSGGGP*RLPVLY Trigger: ATACAGAACCGGGAGCCTTCAAGGTCCTCCGCCACT...GCGACGCCTCAGCCGCCTCTGTTGCTCTCGGAGCCCCGGCTTCCCCTGCACCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR TCA 90 bp | CCGGGGCTCCGAGAGCAACAGAGGCGGCTGAGGCGTCGCTGTCACCTCCGGCTGCAGCAGGACTGCGTCTaGAACTCGGCATCAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PGLREQQRRLRRRCHLRLQQDCV*NSASGC Trigger: GCAGCCTGATGCCGAGTTTCAGACGCAGTCCTGCTG...CAGCCGGAGGTGACAGCGACGCCTCAGCCGCCTCTGTTGCTCTCGGAGCCCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR GCA 90 bp | TTTTCTGCAGCTCGTTCGCAGTTCTCCAGGGACCAGCCTCTCGAGAGGGGGCGCGCCCCACTCGCATCCTaGCACCTTGCCCGCGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: FSAARSQFSRDQPLERGRAPLAS*HLARGS Trigger: GCTACCGCGGGCAAGGTGGCAGGATGCGAGTGGGGC...GCGCCCCCTCTCGAGAGGCTGGTCCCTGGAGAACTGCGAACGAGCTGCAGAAAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR GCA 90 bp | GCAAACTTGTGTCCAACCGCACTGCTCCCAGCGACTCCTTCCAGAAGAGAATGCCTCCCGGGGCTGGCGTaGCCTGCGCTTACGCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: ANLCPTALLPATPSRRECLPGLA*PALTLR Trigger: GCGGAGCGTAAGCGCAGGGCACGCCAGCCCCGGGAG...GCATTCTCTTCTGGAAGGAGTCGCTGGGAGCAGTGCGGTTGGACACAAGTTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR CCA 90 bp | GCAAACTTGTGTCCAACCGCACTGCTCCCAGCGACTCCTTCCAGAAGAGAATGCCGCCCTCCCCCGCTCTaGGGCTGGGATCCCCGACTC | + |
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Preference number: 4 (lower is better) Translates to: ANLCPTALLPATPSRRECRPPPL*GWDPRL Trigger: GAGTCGGGGATCCCAGCCCCAGAGCGGGGGAGGGCG...GCATTCTCTTCTGGAAGGAGTCGCTGGGAGCAGTGCGGTTGGACACAAGTTTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR GCA 90 bp | TTTTCTGCAGCTCGTTCGCAGTTCTCCAGGGACCAGCCTCTCGAGAGGGGGCGCGCTGTCACCTCCGGCTaGTGCAGTAAAACCCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: FSAARSQFSRDQPLERGRAVTSG*CSKTPS Trigger: GCTCGGGGTTTTACTGCAGCAGCCGGAGGTGACAGC...GCGCCCCCTCTCGAGAGGCTGGTCCCTGGAGAACTGCGAACGAGCTGCAGAAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR TCA 90 bp | CGCACTGCTCCCAGCGACTCCTTCCAGAAGAGAATGCCTGCTGCAACACTCCCCGATCCCCGACTCTACTaGAGGGGCACGTCCTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: RTAPSDSFQKRMPAATLPDPRLY*RGTSFG Trigger: GCCAAAGGACGTGCCCCTTCAGTAGAGTCGGGGATC...GGGGAGTGTTGCAGCAGGCATTCTCTTCTGGAAGGAGTCGCTGGGAGCAGTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR GCA 90 bp | GCTCGTTCGCAGTTCTCCAGGGACCAGCCTCTCGAGAGGGGGCGCTTTCCCGGTTGGTCCTCGGAGGAATaGAGCCCAACGACTTCTACA | + |
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Preference number: 4 (lower is better) Translates to: ARSQFSRDQPLERGRFPGWSSEE*SPTTST Trigger: TGTAGAAGTCGTTGGGCTGCATTCCTCCGAGGACCA...ACCGGGAAAGCGCCCCCTCTCGAGAGGCTGGTCCCTGGAGAACTGCGAACGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR TCA 90 bp | GAAAACACTCCTACGCAAACTTGTGTCCAACCGCACTGCTCCCAGCGACTCCTTGTGCCTCTGAACGTGTaGAACGCCCCTCCCCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: ENTPTQTCVQPHCSQRLLVPLNV*NAPPRP Trigger: GGGGCGGGGAGGGGCGTTTCACACGTTCAGAGGCAC...AAGGAGTCGCTGGGAGCAGTGCGGTTGGACACAAGTTTGCGTAGGAGTGTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR CCA 90 bp | GGTCCCAACTTCTCATACGCTGCCACTCTTAGTCCTGGGCGATCAGACTGGTCCCGCGAGCACCTTCCCTaGAAGCCCACATCCATCACC | + |
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Preference number: 4 (lower is better) Translates to: GPNFSYAATLSPGRSDWSREHLP*KPTSIT Trigger: GGTGATGGATGTGGGCTTCCAGGGAAGGTGCTCGCG...GGACCAGTCTGATCGCCCAGGACTAAGAGTGGCAGCGTATGAGAAGTTGGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR CCA 90 bp | ATCTGGTTTTCTGCAGCTCGTTCGCAGTTCTCCAGGGACCAGCCTCTCGAGAGGTCGGGCTGCAGACTTTaGCAAGGGGGCGAAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: IWFSAARSQFSRDQPLERSGCRL*QGGEEA Trigger: GGCTTCTTCGCCCCCTTGCCAAAGTCTGCAGCCCGA...CCTCTCGAGAGGCTGGTCCCTGGAGAACTGCGAACGAGCTGCAGAAAACCAGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR GCA 90 bp | CAAACTTGTGTCCAACCGCACTGCTCCCAGCGACTCCTTCCAGAAGAGAATGCCGTCACCTCCGGCTGCTaGAGTAAAACCCCGAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: QTCVQPHCSQRLLPEENAVTSGC*SKTPSR Trigger: TCGGCTCGGGGTTTTACTGCAGCAGCCGGAGGTGAC...GGCATTCTCTTCTGGAAGGAGTCGCTGGGAGCAGTGCGGTTGGACACAAGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR CCA 90 bp | TTGTGTCCAACCGCACTGCTCCCAGCGACTCCTTCCAGAAGAGAATGCCTGCTGAGAAGGTGGGAGCTCTaGGGCTTTAGCCTAAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LCPTALLPATPSRRECLLRRWEL*GFSLSC Trigger: GCAGCTTAGGCTAAAGCCCCAGAGCTCCCACCTTCT...CAGCAGGCATTCTCTTCTGGAAGGAGTCGCTGGGAGCAGTGCGGTTGGACACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR CCA 90 bp | CTCTGCAAAGGAGCCACTATATCAAAGCATTTAACTGGAGCTGTTGAGTTCCTGCGCCCTCCCCCGCTCTaGGGCTGGGATCCCCGACTC | + |
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Preference number: 4 (lower is better) Translates to: LCKGATISKHLTGAVEFLRPPPL*GWDPRL Trigger: GAGTCGGGGATCCCAGCCCCAGAGCGGGGGAGGGCG...CAGGAACTCAACAGCTCCAGTTAAATGCTTTGATATAGTGGCTCCTTTGCAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CCA 90 bp | AAACTTGTGTCCAACCGCACTGCTCCCAGCGACTCCTTCCAGAAGAGAATGCCTCCTGGGCGATCAGACTaGTCCTCGGAGGAATGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KLVSNRTAPSDSFQKRMPPGRSD*SSEECS Trigger: GCTGCATTCCTCCGAGGACCAGTCTGATCGCCCAGG...AGGCATTCTCTTCTGGAAGGAGTCGCTGGGAGCAGTGCGGTTGGACACAAGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR GCA 90 bp | TCGGCCCCGCCCTCAGGACTCTTGCTAAAACTCAAATTCTACCTGGCTAATTCCCAGCATCCATCGGGCTaGAGACTTTGGCAAGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SAPPSGLLLKLKFYLANSQHPSG*RLWQGG Trigger: GCCCCCTTGCCAAAGTCTGCAGCCCGATGGATGCTG...GGAATTAGCCAGGTAGAATTTGAGTTTTAGCAAGAGTCCTGAGGGCGGGGCCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR GCA 90 bp | ATGGTCCCAACTTCTCATACGCTGCCACTCTTAGTCCTGGGCGATCAGACTGGTTGTGTCCAACCGCACTaGTCCCAGCGACTCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: MVPTSHTLPLLVLGDQTGCVQPH*SQRLLP Trigger: TGGAAGGAGTCGCTGGGAGCAGTGCGGTTGGACACA...ACCAGTCTGATCGCCCAGGACTAAGAGTGGCAGCGTATGAGAAGTTGGGACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| 3UTR CAA 72 bp | CCCGGAGTTAGGTGTTCGGCCCCGCCCTCAGGACTCTaGCTAAAACTCAAATTCTACCTGGCTAATTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: PGVRCSAPPSGL*LKLKFYLANSG Trigger: ACCGGAATTAGCCAGGTAGAATTTGAGTTTTAGCAAGAGTCCTGAGGGCGGGGCCGAACACCTAACTCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR GCA 90 bp | CTCTATGGTCCCAACTTCTCATACGCTGCCACTCTTAGTCCTGGGCGATCAGACCGGAGAACTTGTGTGTaGCCACTCACAAGTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LYGPNFSYAATLSPGRSDRRTCV*PLTSAE Trigger: CTCTGCACTTGTGAGTGGGCACACACAAGTTCTCCG...GTCTGATCGCCCAGGACTAAGAGTGGCAGCGTATGAGAAGTTGGGACCATAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR GCA 90 bp | GTTCCTGCTGGTAGAATATTACTTCCAGCCTATTTATTAGCTTGTCTTCCGGTGCTCCTCCCCAGCTGCTaGGAGCTTCCCACTGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: VPAGRILLPAYLLACLPVLLPSC*ELPTAP Trigger: CGGCGCAGTGGGAAGCTCGCAGCAGCTGGGGAGGAG...CACCGGAAGACAAGCTAATAAATAGGCTGGAAGTAATATTCTACCAGCAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR GCA 90 bp | CTCTGCAAAGGAGCCACTATATCAAAGCATTTAACTGGAGCTGTTGAGTTCCTGTGGCTCCTCCCCAGCTaGTGCGAGCTTCCCACTGCG | + |
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Preference number: 4 (lower is better) Translates to: LCKGATISKHLTGAVEFLWLLPS*CELPTA Trigger: CGCAGTGGGAAGCTCGCAGCAGCTGGGGAGGAGCCA...CAGGAACTCAACAGCTCCAGTTAAATGCTTTGATATAGTGGCTCCTTTGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR TCA 90 bp | GTTCCTGCTGGTAGAATATTACTTCCAGCCTATTTATTAGCTTGTCTTCCGGTGAGCAACAGAGGCGGCTaGGGCGTCGCTGTCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: VPAGRILLPAYLLACLPVSNRGG*GVAVTS Trigger: GGAGGTGACAGCGACGCCTCAGCCGCCTCTGTTGCT...CACCGGAAGACAAGCTAATAAATAGGCTGGAAGTAATATTCTACCAGCAGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR GCA 90 bp | AAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACCTAAATCTCCCGGGGCTGGCGTaGCCTGCGCTTACGCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: KRVLFRSDSEGRHNSYLNLPGLA*PALTLR Trigger: GCGGAGCGTAAGCGCAGGGCACGCCAGCCCCGGGAG...ATTTAGGTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR GCA 90 bp | TACGCAAACTTGTGTCCAACCGCACTGCTCCCAGCGACTCCTTCCAGAAGAGAAGTGCCCACTCACAAGTaGAGAGAATTAATCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: YANLCPTALLPATPSRREVPTHK*RELISA Trigger: GGCCGAGATTAATTCTCTGCACTTGTGAGTGGGCAC...TTCTCTTCTGGAAGGAGTCGCTGGGAGCAGTGCGGTTGGACACAAGTTTGCGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR GCA 90 bp | AAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACCTAAATCTGCGAGCTTCCCACTaGGCCGGGCGCCTGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: KRVLFRSDSEGRHNSYLNLRASH*AGRLGA Trigger: GGCTCCCAGGCGCCCGGCGCAGTGGGAAGCTCGCAG...ATTTAGGTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR TCA 90 bp | ACGCTGCCACTCTTAGTCCTGGGCGATCAGACTGGTCCTCGGAGGAATGCAGCCCCGGTGATTAATTATTaGCAAAAGGAAAACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: TLPLLVLGDQTGPRRNAAPVINY*QKENTP Trigger: AGGAGTGTTTTCCTTTTGTCAATAATTAATCACCGG...GGCTGCATTCCTCCGAGGACCAGTCTGATCGCCCAGGACTAAGAGTGGCAGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR GCA 90 bp | CACATCTTTTTATACATCGTAAACAAGGATAGGATACTTCTGACAGTAGCCTATGGGGCTGGCGTGCCCTaGGCTTACGCTCCGCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: HIFLYIVNKDRILLTVAYGAGVP*AYAPRS Trigger: CGAGCGCGGAGCGTAAGCGCAGGGCACGCCAGCCCC...ATAGGCTACTGTCAGAAGTATCCTATCCTTGTTTACGATGTATAAAAAGATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR GCA 90 bp | ACAAAAGGAAAACACTCCTACGCAAACTTGTGTCCAACCGCACTGCTCCCAGCGGGCTTTAGCCTAAGCTaGGTTAAAGCGCTCAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: TKGKHSYANLCPTALLPAGFSLS*VKALRE Trigger: TTCCCTGAGCGCTTTAACGCAGCTTAGGCTAAAGCC...CGCTGGGAGCAGTGCGGTTGGACACAAGTTTGCGTAGGAGTGTTTTCCTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR CCA 90 bp | CACTGTATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTAAAACTGCGCCGGGCGCCTaGGAGCCTCCCGGAGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: HCIISGLKHNVACAKETKTAPGA*EPPGVR Trigger: CCTAACTCCGGGAGGCTCCCAGGCGCCCGGCGCAGT...TTTAGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAATACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR TCA 90 bp | CACTGTATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTAAAGTGCCTCTGAACGTGTaGAACGCCCCTCCCCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: HCIISGLKHNVACAKETKVPLNV*NAPPRP Trigger: GGGGCGGGGAGGGGCGTTTCACACGTTCAGAGGCAC...TTTAGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAATACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR TCA 90 bp | AGTCACTGTATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTTCCCTGCGGCTTAGGTaGGCGCCGAGGCTTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SHCIISGLKHNVACAKETSLRLR*APRLWL Trigger: GAGCCAAAGCCTCGGCGCTCACCTAAGCCGCAGGGA...AGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAATACAGTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
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| CDS-3UTR CCA 90 bp | GTTCCTGCTGGTAGAATATTACTTCCAGCCTATTTATTAGCTTGTCTTCCGGTGTCGGGCTGCAGACTTTaGCAAGGGGGCGAAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: VPAGRILLPAYLLACLPVSGCRL*QGGEEA Trigger: GGCTTCTTCGCCCCCTTGCCAAAGTCTGCAGCCCGA...CACCGGAAGACAAGCTAATAAATAGGCTGGAAGTAATATTCTACCAGCAGGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR TCA 90 bp | GTTCCTGCTGGTAGAATATTACTTCCAGCCTATTTATTAGCTTGTCTTCCGGTGAGTGGCGGAGGACCTTaGAGGCTCCCGGTTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VPAGRILLPAYLLACLPVSGGGP*RLPVLY Trigger: ATACAGAACCGGGAGCCTTCAAGGTCCTCCGCCACT...CACCGGAAGACAAGCTAATAAATAGGCTGGAAGTAATATTCTACCAGCAGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR GCA 90 bp | ATATCAAAGCATTTAACTGGAGCTGTTGAGTTCCTGCTGGTAGAATATTACTTCGGCCGAGACGCTTTCTaGTCGAGGCCCAGGGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISKHLTGAVEFLLVEYYFGRDAF*SRPRGV Trigger: GACTCCCCTGGGCCTCGAGCAGAAAGCGTCTCGGCC...GAAGTAATATTCTACCAGCAGGAACTCAACAGCTCCAGTTAAATGCTTTGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR GCA 90 bp | AATATGATTTGTGAGGTAAAGTCACTGTATTATCTCCGGTCTAAAGCACAATGTGCCCCACTCGCATCCTaGCACCTTGCCCGCGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: NMICEVKSLYYLRSKAQCAPLAS*HLARGS Trigger: GCTACCGCGGGCAAGGTGGCAGGATGCGAGTGGGGC...ACATTGTGCTTTAGACCGGAGATAATACAGTGACTTTACCTCACAAATCATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACCTACAGCATCCATCGGGCTaGAGACTTTGGCAAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EKRVLFRSDSEGRHNSYLQHPSG*RLWQGG Trigger: GCCCCCTTGCCAAAGTCTGCAGCCCGATGGATGCTG...TAGGTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR CCA 90 bp | CACATCTTTTTATACATCGTAAACAAGGATAGGATACTTCTGACAGTAGCCTATCTGGGGAAAGAAGGCTaGGAGGCGGCCCGGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HIFLYIVNKDRILLTVAYLGKEG*EAARWC Trigger: GCACCACCGGGCCGCCTCCCAGCCTTCTTTCCCCAG...ATAGGCTACTGTCAGAAGTATCCTATCCTTGTTTACGATGTATAAAAAGATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR CCA 90 bp | CCACTCTTAGTCCTGGGCGATCAGACTGGTCCTCGGAGGAATGCAGCCCAACGAAACTCAAATTCTACCTaGCTAATTCCGGTGATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLLVLGDQTGPRRNAAQRNSNST*LIPVIN Trigger: ATTAATCACCGGAATTAGCCAGGTAGAATTTGAGTT...TCGTTGGGCTGCATTCCTCCGAGGACCAGTCTGATCGCCCAGGACTAAGAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617024.1 |
||
| CDS-3UTR CCA 90 bp | CTCTGCAAAGGAGCCACTATATCAAAGCATTTAACTGGAGCTGTTGAGTTCCTGTCCTCATCTCCCAGTTaGGTGTATCTCCCTGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCKGATISKHLTGAVEFLSSSPS*VYLPAA Trigger: AGCCGCAGGGAGATACACCCAACTGGGAGATGAGGA...CAGGAACTCAACAGCTCCAGTTAAATGCTTTGATATAGTGGCTCCTTTGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR TCA 90 bp | AATATGATTTGTGAGGTAAAGTCACTGTATTATCTCCGGTCTAAAGCACAATGTTCCCTGCGGCTTAGGTaGGCGCCGAGGCTTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NMICEVKSLYYLRSKAQCSLRLR*APRLWL Trigger: GAGCCAAAGCCTCGGCGCTCACCTAAGCCGCAGGGA...ACATTGTGCTTTAGACCGGAGATAATACAGTGACTTTACCTCACAAATCATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
||
| CDS-3UTR GCA 90 bp | GAGAAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACCTATGTGTCCAACCGCACTaGTCCCAGCGACTCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKRVLFRSDSEGRHNSYLCVQPH*SQRLLP Trigger: TGGAAGGAGTCGCTGGGAGCAGTGCGGTTGGACACA...TAGGTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCTGCTGGTAGAATATTACTTCCAGCCTATTTATTAGCTTGTCTTCCGGTGGGTTCTGTATCTCCGTaGCCGAGACGCTTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VPAGRILLPAYLLACLPVGSVSP*PRRFLL Trigger: GAGCAGAAAGCGTCTCGGCCACGGAGATACAGAACC...CACCGGAAGACAAGCTAATAAATAGGCTGGAAGTAATATTCTACCAGCAGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR TCA 90 bp | CATACATTAATATTTATTGGGAGGAAAGCAAAACTGCAAAACGTAGTCTTTGGCGAGAGCAGGGCTTGCTaGGAGTGGCGGAGGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTLIFIGRKAKLQNVVFGESRAC*EWRRTL Trigger: CAAGGTCCTCCGCCACTCTCAGCAAGCCCTGCTCTC...GCCAAAGACTACGTTTTGCAGTTTTGCTTTCCTCCCAATAAATATTAATGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACCTAAATCAGCAGGACTGCGTCTaGAACTCGGCATCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRVLFRSDSEGRHNSYLNQQDCV*NSASGC Trigger: GCAGCCTGATGCCGAGTTTCAGACGCAGTCCTGCTG...ATTTAGGTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR TCA 90 bp | ATATCAAAGCATTTAACTGGAGCTGTTGAGTTCCTGCTGGTAGAATATTACTTCGATCCCCGACTCTACTaGAGGGGCACGTCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISKHLTGAVEFLLVEYYFDPRLY*RGTSFG Trigger: GCCAAAGGACGTGCCCCTTCAGTAGAGTCGGGGATC...GAAGTAATATTCTACCAGCAGGAACTCAACAGCTCCAGTTAAATGCTTTGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACCTATCGAGGGCCCAGGAATaGGCACTAAGAAAGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EKRVLFRSDSEGRHNSYLSRAQE*ALRKSR Trigger: CCTGGACTTTCTTAGTGCTCATTCCTGGGCCCTCGA...TAGGTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497137.1 |
||
| CDS-3UTR GCA 90 bp | CAGAATATGATTTGTGAGGTAAAGTCACTGTATTATCTCCGGTCTAAAGCACAAGTCACCTCCGGCTGCTaGAGTAAAACCCCGAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QNMICEVKSLYYLRSKAQVTSGC*SKTPSR Trigger: TCGGCTCGGGGTTTTACTGCAGCAGCCGGAGGTGAC...TTGTGCTTTAGACCGGAGATAATACAGTGACTTTACCTCACAAATCATATTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR GCA 90 bp | ATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTAAAGAGACAGCTGTCACCTCCGGCTaGTGCAGTAAAACCCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IISGLKHNVACAKETKETAVTSG*CSKTPS Trigger: GCTCGGGGTTTTACTGCAGCAGCCGGAGGTGACAGC...TGTCTCTTTAGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCTGCTGGTAGAATATTACTTCCAGCCTATTTATTAGCTTGTCTTCCGGTGTGGTCCTCGGAGGAATaGAGCCCAACGACTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: VPAGRILLPAYLLACLPVWSSEE*SPTTST Trigger: TGTAGAAGTCGTTGGGCTGCATTCCTCCGAGGACCA...CACCGGAAGACAAGCTAATAAATAGGCTGGAAGTAATATTCTACCAGCAGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR CCA 90 bp | ATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTAAAGAGACACGCGAGCACCTTCCCTaGAAGCCCACATCCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: IISGLKHNVACAKETKETREHLP*KPTSIT Trigger: GGTGATGGATGTGGGCTTCCAGGGAAGGTGCTCGCG...TGTCTCTTTAGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR CCA 90 bp | ATATCAAAGCATTTAACTGGAGCTGTTGAGTTCCTGCTGGTAGAATATTACTTCCCTGGGCGATCAGACTaGTCCTCGGAGGAATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISKHLTGAVEFLLVEYYFPGRSD*SSEECS Trigger: GCTGCATTCCTCCGAGGACCAGTCTGATCGCCCAGG...GAAGTAATATTCTACCAGCAGGAACTCAACAGCTCCAGTTAAATGCTTTGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACCTATCCTCATCTCCCAGTTaGGTGTATCTCCCTGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EKRVLFRSDSEGRHNSYLSSSPS*VYLPAA Trigger: AGCCGCAGGGAGATACACCCAACTGGGAGATGAGGA...TAGGTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
||
| CDS-3UTR GCA 90 bp | AAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACCTAAATTTGGGTGTATCTCCCTaGGGCTTAGGTGAGCGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KRVLFRSDSEGRHNSYLNLGVSP*GLGERR Trigger: TCGGCGCTCACCTAAGCCGCAGGGAGATACACCCAA...ATTTAGGTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
||
| CDS-3UTR TCA 90 bp | ATATCAAAGCATTTAACTGGAGCTGTTGAGTTCCTGCTGGTAGAATATTACTTCCCCCAGGGAAATAGATaGAAGGATCGTGCCCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISKHLTGAVEFLLVEYYFPQGNR*KDRARR Trigger: TCTCCGGGCACGATCCTTTCATCTATTTCCCTGGGG...GAAGTAATATTCTACCAGCAGGAACTCAACAGCTCCAGTTAAATGCTTTGATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR GCA 90 bp | CATACATTAATATTTATTGGGAGGAAAGCAAAACTGCAAAACGTAGTCTTTGGCTTGGGTGTATCTCCCTaGGGCTTAGGTGAGCGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HTLIFIGRKAKLQNVVFGLGVSP*GLGERR Trigger: TCGGCGCTCACCTAAGCCGCAGGGAGATACACCCAA...GCCAAAGACTACGTTTTGCAGTTTTGCTTTCCTCCCAATAAATATTAATGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACCTATTCTCCTCTCTGGGTTaGTGTTTCCTCATCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKRVLFRSDSEGRHNSYLFSSLG*CFLISQ Trigger: CTGGGAGATGAGGAAACAGCAACCCAGAGAGGAGAA...TAGGTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
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| CDS-3UTR GCA 90 bp | ATATCAAAGCATTTAACTGGAGCTGTTGAGTTCCTGCTGGTAGAATATTACTTCCGGAGAACTTGTGTGTaGCCACTCACAAGTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISKHLTGAVEFLLVEYYFRRTCV*PLTSAE Trigger: CTCTGCACTTGTGAGTGGGCACACACAAGTTCTCCG...GAAGTAATATTCTACCAGCAGGAACTCAACAGCTCCAGTTAAATGCTTTGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR GCA 90 bp | AGTCACTGTATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTTTCTCCTCTCTGGGTTaGTGTTTCCTCATCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHCIISGLKHNVACAKETFSSLG*CFLISQ Trigger: CTGGGAGATGAGGAAACAGCAACCCAGAGAGGAGAA...AGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAATACAGTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
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| CDS-3UTR GCA 90 bp | ATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTAAAGAGACATTTCCCCCAGCATCATaGAAGGCAAGGCAACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: IISGLKHNVACAKETKETFPPAS*KARQHH Trigger: GTGGTGTTGCCTTGCCTTGCATGATGCTGGGGGAAA...TGTCTCTTTAGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CCA 90 bp | AATATGATTTGTGAGGTAAAGTCACTGTATTATCTCCGGTCTAAAGCACAATGTAGAAGGTGGGAGCTCTaGGGCTTTAGCCTAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NMICEVKSLYYLRSKAQCRRWEL*GFSLSC Trigger: GCAGCTTAGGCTAAAGCCCCAGAGCTCCCACCTTCT...ACATTGTGCTTTAGACCGGAGATAATACAGTGACTTTACCTCACAAATCATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CCA 90 bp | ATATCAAAGCATTTAACTGGAGCTGTTGAGTTCCTGCTGGTAGAATATTACTTCCACGCCTCAAATCCATaGTTGGCTCCTTCAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISKHLTGAVEFLLVEYYFHASNP*LAPSSC Trigger: GCAGCTTGAAGGAGCCAACCATGGATTTGAGGCGTG...GAAGTAATATTCTACCAGCAGGAACTCAACAGCTCCAGTTAAATGCTTTGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CCA 90 bp | CACTGTATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTAAACACGCCTCAAATCCATaGTTGGCTCCTTCAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HCIISGLKHNVACAKETKHASNP*LAPSSC Trigger: GCAGCTTGAAGGAGCCAACCATGGATTTGAGGCGTG...TTTAGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAATACAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
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| CDS-3UTR TCA 90 bp | GTTCCTGCTGGTAGAATATTACTTCCAGCCTATTTATTAGCTTGTCTTCCGGTGTTTAACTGGAGCTGTTaGGTTCCTGCTGGTAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: VPAGRILLPAYLLACLPVFNWSC*VPAGRI Trigger: TATTCTACCAGCAGGAACTCAACAGCTCCAGTTAAA...CACCGGAAGACAAGCTAATAAATAGGCTGGAAGTAATATTCTACCAGCAGGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR GCA 90 bp | ATATCAAAGCATTTAACTGGAGCTGTTGAGTTCCTGCTGGTAGAATATTACTTCGTGCCCACTCACAAGTaGAGAGAATTAATCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISKHLTGAVEFLLVEYYFVPTHK*RELISA Trigger: GGCCGAGATTAATTCTCTGCACTTGTGAGTGGGCAC...GAAGTAATATTCTACCAGCAGGAACTCAACAGCTCCAGTTAAATGCTTTGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGCAAAGGAGCCACTATATCAAAGCATTTAACTGGAGCTGTTGAGTTCCTGATCTTGTTTTGGCTCTaGAAAGGAGCCACTATATCA | + |
|
Preference number: 4 (lower is better) Translates to: LCKGATISKHLTGAVEFLILFWL*KGATIS Trigger: TGATATAGTGGCTCCTTTGCAGAGCCAAAACAAGAT...CAGGAACTCAACAGCTCCAGTTAAATGCTTTGATATAGTGGCTCCTTTGCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR CCA 90 bp | AGTCACTGTATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTCCTCAAATCCATGGTTaGCTCCTTCAAGCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SHCIISGLKHNVACAKETPQIHG*LLQAAV Trigger: TACTGCAGCTTGAAGGAGCCAACCATGGATTTGAGG...AGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAATACAGTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
||
| CDS-3UTR GCA 90 bp | CATACATTAATATTTATTGGGAGGAAAGCAAAACTGCAAAACGTAGTCTTTGGCGGCTTTAGCCTAAGCTaGGTTAAAGCGCTCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HTLIFIGRKAKLQNVVFGGFSLS*VKALRE Trigger: TTCCCTGAGCGCTTTAACGCAGCTTAGGCTAAAGCC...GCCAAAGACTACGTTTTGCAGTTTTGCTTTCCTCCCAATAAATATTAATGTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR CCA 90 bp | CAGAATATGATTTGTGAGGTAAAGTCACTGTATTATCTCCGGTCTAAAGCACAACCTCAAATCCATGGTTaGCTCCTTCAAGCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QNMICEVKSLYYLRSKAQPQIHG*LLQAAV Trigger: TACTGCAGCTTGAAGGAGCCAACCATGGATTTGAGG...TTGTGCTTTAGACCGGAGATAATACAGTGACTTTACCTCACAAATCATATTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
||
| CDS-3UTR GCA 90 bp | ATAGAGAAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACTTGGCTCCTTCAAGCTaGAGTAAGTTTGTCCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IEKRVLFRSDSEGRHNSYLAPSS*SKFVLR Trigger: TCTTAGGACAAACTTACTGCAGCTTGAAGGAGCCAA...GTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTTCTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR GCA 90 bp | CAGAATATGATTTGTGAGGTAAAGTCACTGTATTATCTCCGGTCTAAAGCACAATTGGCTCCTTCAAGCTaGAGTAAGTTTGTCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: QNMICEVKSLYYLRSKAQLAPSS*SKFVHV Trigger: CACATGGACAAACTTACTGCAGCTTGAAGGAGCCAA...TTGTGCTTTAGACCGGAGATAATACAGTGACTTTACCTCACAAATCATATTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497137.1 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACCTAAATGTTAGTTCTCCTCTCTaGGTTGCTGTTTCCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KRVLFRSDSEGRHNSYLNVSSPL*VAVSSS Trigger: AGATGAGGAAACAGCAACCCAGAGAGGAGAACTAAC...ATTTAGGTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
||
| CDS-3UTR CCA 90 bp | AATAAGTGTCAAGGGAGCACTTTAAGCATGATTCTGGTAGGTCTGTTAGGAGTCAACTCAAATTCTACCTaGCTAATTCCGGTGATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: NKCQGSTLSMILVGLLGVNSNST*LIPVIN Trigger: ATTAATCACCGGAATTAGCCAGGTAGAATTTGAGTT...GACTCCTAACAGACCTACCAGAATCATGCTTAAAGTGCTCCCTTGACACTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR CCA 90 bp | CACATCTTTTTATACATCGTAAACAAGGATAGGATACTTCTGACAGTAGCCTATGTTAGTTCTCCTCTCTaGGTTGCTGTTTCCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HIFLYIVNKDRILLTVAYVSSPL*VAVSSS Trigger: AGATGAGGAAACAGCAACCCAGAGAGGAGAACTAAC...ATAGGCTACTGTCAGAAGTATCCTATCCTTGTTTACGATGTATAAAAAGATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR CCA 90 bp | CAGAATATGATTTGTGAGGTAAAGTCACTGTATTATCTCCGGTCTAAAGCACAACAGGCGAATGTGGATTaGAATAAAGACATAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QNMICEVKSLYYLRSKAQQANVD*NKDIGS Trigger: ACTGCCTATGTCTTTATTCCAATCCACATTCGCCTG...TTGTGCTTTAGACCGGAGATAATACAGTGACTTTACCTCACAAATCATATTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
||
| CDS-3UTR CCA 90 bp | CACTGTATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTAAACAGGCGAATGTGGATTaGAATAAAGACATAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HCIISGLKHNVACAKETKQANVD*NKDIGS Trigger: ACTGCCTATGTCTTTATTCCAATCCACATTCGCCTG...TTTAGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAATACAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
||
| CDS-3UTR CCA 90 bp | ATAGAGAAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACGCAAAACGTAGTCTTTaGCATTCACATTTGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IEKRVLFRSDSEGRHNSYAKRSL*HSHLLQ Trigger: CTGAAGCAAATGTGAATGCCAAAGACTACGTTTTGC...GTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTTCTCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR TCA 90 bp | AGTCACTGTATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTTTCATGAACTCTGTATaGAAGGAAATAATTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHCIISGLKHNVACAKETFMNSV*KEIIAS Trigger: GGAGGCAATTATTTCCTTTCATACAGAGTTCATGAA...AGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAATACAGTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR CCA 90 bp | AGTCACTGTATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTACATGCAAGTTAATTTaGCATGCCAAACATCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHCIISGLKHNVACAKETTCKLI*HAKHLS Trigger: AGAAAGATGTTTGGCATGCCAAATTAACTTGCATGT...AGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAATACAGTGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR TCA 90 bp | AATATGATTTGTGAGGTAAAGTCACTGTATTATCTCCGGTCTAAAGCACAATGTCCGGTGATTAATTATTaGCAAAAGGAAAACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NMICEVKSLYYLRSKAQCPVINY*QKENTP Trigger: AGGAGTGTTTTCCTTTTGTCAATAATTAATCACCGG...ACATTGTGCTTTAGACCGGAGATAATACAGTGACTTTACCTCACAAATCATATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CCA 90 bp | CAGAATATGATTTGTGAGGTAAAGTCACTGTATTATCTCCGGTCTAAAGCACAAGTAAGTTTGTCCATGTaGCTCCTTCTGAATATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QNMICEVKSLYYLRSKAQVSLSM*LLLNIN Trigger: ATTAATATTCAGAAGGAGCCACATGGACAAACTTAC...TTGTGCTTTAGACCGGAGATAATACAGTGACTTTACCTCACAAATCATATTCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497137.1 |
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| CDS GCA 90 bp | AAGAAGGCTGGGAGGCGGCCCGGTGGTGCAGAGACGCGCGGCGCCTaGTCCCGCGGCTCCCGGGGCTGGCGTGCCCTGCGCTTACGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KKAGRRPGGAETRGA*SRGSRGWRALRLRS Trigger: GGAGCGTAAGCGCAGGGCACGCCAGCCCCGGGAGCCGCGGGAGCAGGCGCCGCGCGTCTCTGCACCACCGGGCCGCCTCCCAGCCTTCTT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000617024.1 |
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| CDS CCA 90 bp | TGGCTCCTCCCCAGCTGCTGCGAGCTTCCCACTGCGCCGGGCGCCTaGGAGCCTCCCGGAGTTAGGTGTTCGGCCCCGCCCTCAGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: WLLPSCCELPTAPGA*EPPGVRCSAPPSGL Trigger: GAGTCCTGAGGGCGGGGCCGAACACCTAACTCCGGGAGGCTCCCAGGCGCCCGGCGCAGTGGGAAGCTCGCAGCAGCTGGGGAGGAGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CAA 90 bp | GTGCAGGGGAAGCCGGGGCTCCGAGAGCAACAGAGGCGGCTGAGGCGTCGCTGTGAAGGGGCACGTCCTTaGGCGGTGGTAGAGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VQGKPGLREQQRRLRRRCEGARP*AVVEGR Trigger: CCGCCCCTCTACCACCGCCAAAGGACGTGCCCCTTC...ACAGCGACGCCTCAGCCGCCTCTGTTGCTCTCGGAGCCCCGGCTTCCCCTGCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS CCA 90 bp | GTGCAGAGAATTAATCTCGGCCCGGACTGCGGCAGGAGGGCAAACTaGGGAAAGAAGGCTGGGAGGCGGCCCGGTGGTGCAGAGACGCGC | + |
|
Preference number: 5 (lower is better) Translates to: VQRINLGPDCGRRAN*GKKAGRRPGGAETR Trigger: GCGCGTCTCTGCACCACCGGGCCGCCTCCCAGCCTTCTTTCCCCAGTTTGCCCTCCTGCCGCAGTCCGGGCCGAGATTAATTCTCTGCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000617024.1 |
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| CDS TCA 90 bp | CTGTTTCCTCATCTCCCAGTTGGGTGTATCTCCCTGCGGCTTAGGTaGGCGCCGAGGCTTTGGCTCCTCCCCAGCTGCTGCGAGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LFPHLPVGCISLRLR*APRLWLLPSCCELP Trigger: GGGAAGCTCGCAGCAGCTGGGGAGGAGCCAAAGCCTCGGCGCTCACCTAAGCCGCAGGGAGATACACCCAACTGGGAGATGAGGAAACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497374.1 |
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| CDS CCA 90 bp | GAATATCTTCCCCGGAGGGCTCGGGACCAGCGCGAGCACCTTCCCTaGAAGCCCACATCCATCACCCAGCGATCTCCTCTCCATCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EYLPRRARDQREHLP*KPTSITQRSPLHRE Trigger: CTCTCGATGGAGAGGAGATCGCTGGGTGATGGATGTGGGCTTCCAGGGAAGGTGCTCGCGCTGGTCCCGAGCCCTCCGGGGAAGATATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000617024.1 |
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| CDS TCA 90 bp | TCCTCTCCATCGAGAGCAGGGCTTGCTGAGAGTGGCGGAGGACCTTaGAGGCTCCCGGTTCTGTATCTCCGTGGCCGAGACGCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSPSRAGLAESGGGP*RLPVLYLRGRDAFC Trigger: GCAGAAAGCGTCTCGGCCACGGAGATACAGAACCGGGAGCCTTCAAGGTCCTCCGCCACTCTCAGCAAGCCCTGCTCTCGATGGAGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CAA 90 bp | ACGCTGCCACTCTTAGTCCTGGGCGATCAGACTGGTCCTCGGAGGAATGCAGCCGAGTGGCGGAGGACCTaGAAGGCTCCCGGTTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: TLPLLVLGDQTGPRRNAAEWRRT*KAPGSV Trigger: TACAGAACCGGGAGCCTTCAAGGTCCTCCGCCACTC...GGCTGCATTCCTCCGAGGACCAGTCTGATCGCCCAGGACTAAGAGTGGCAGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR CAA 90 bp | GAAGCCGGGGCTCCGAGAGCAACAGAGGCGGCTGAGGCGTCGCTGTCACCTCCGCCGCCCTCAGGACTCTaGCTAAAACTCAAATTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: EAGAPRATEAAEASLSPPPPSGL*LKLKFY Trigger: GTAGAATTTGAGTTTTAGCAAGAGTCCTGAGGGCGG...CGGAGGTGACAGCGACGCCTCAGCCGCCTCTGTTGCTCTCGGAGCCCCGGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS TCA 90 bp | CATCCATCACCCAGCGATCTCCTCTCCATCGAGAGCAGGGCTTGCTaGGAGTGGCGGAGGACCTTGAAGGCTCCCGGTTCTGTATCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: HPSPSDLLSIESRAC*EWRRTLKAPGSVSP Trigger: CGGAGATACAGAACCGGGAGCCTTCAAGGTCCTCCGCCACTCTCAGCAAGCCCTGCTCTCGATGGAGAGGAGATCGCTGGGTGATGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000617024.1 |
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| CDS GCA 90 bp | TCTCTGGGTTGCTGTTTCCTCATCTCCCAGTTGGGTGTATCTCCCTaGGGCTTAGGTGAGCGCCGAGGCTTTGGCTCCTCCCCAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLGCCFLISQLGVSP*GLGERRGFGSSPAA Trigger: AGCAGCTGGGGAGGAGCCAAAGCCTCGGCGCTCACCTAAGCCGCAGGGAGATACACCCAACTGGGAGATGAGGAAACAGCAACCCAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000359175.8 ENST00000497137.1 ENST00000497374.1 |
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| CDS-3UTR CAA 90 bp | CCACTCTTAGTCCTGGGCGATCAGACTGGTCCTCGGAGGAATGCAGCCCAACGAATCGGGCTGCAGACTTaGGCAAGGGGGCGAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLLVLGDQTGPRRNAAQRIGLQT*ARGRRS Trigger: GCTTCTTCGCCCCCTTGCCAAAGTCTGCAGCCCGAT...TCGTTGGGCTGCATTCCTCCGAGGACCAGTCTGATCGCCCAGGACTAAGAGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR CAA 90 bp | GAAAACACTCCTACGCAAACTTGTGTCCAACCGCACTGCTCCCAGCGACTCCTTCATCGAGAGCAGGGCTaGCTGAGAGTGGCGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ENTPTQTCVQPHCSQRLLHREQG*LRVAED Trigger: GTCCTCCGCCACTCTCAGCAAGCCCTGCTCTCGATG...AAGGAGTCGCTGGGAGCAGTGCGGTTGGACACAAGTTTGCGTAGGAGTGTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS-3UTR CAA 90 bp | AAAGGAAAACACTCCTACGCAAACTTGTGTCCAACCGCACTGCTCCCAGCGACTTCGCATCCTGCCACCTaGCCCGCGGTAGCTAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGKHSYANLCPTALLPATSHPAT*PAVARR Trigger: CCTCCTAGCTACCGCGGGCAAGGTGGCAGGATGCGA...AGTCGCTGGGAGCAGTGCGGTTGGACACAAGTTTGCGTAGGAGTGTTTTCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS GCA 90 bp | ATGAAAGGATCGTGCCCGGAGAACTTGTGTGTGCCCACTCACAAGTaGAGAGAATTAATCTCGGCCCGGACTGCGGCAGGAGGGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: MKGSCPENLCVPTHK*RELISARTAAGGQT Trigger: AGTTTGCCCTCCTGCCGCAGTCCGGGCCGAGATTAATTCTCTGCACTTGTGAGTGGGCACACACAAGTTCTCCGGGCACGATCCTTTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000617024.1 |
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| CDS-3UTR CAA 90 bp | AAAATCTGGTTTTCTGCAGCTCGTTCGCAGTTCTCCAGGGACCAGCCTCTCGAGCACTCCTACGCAAACTaGTGTCCAACCGCACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KIWFSAARSQFSRDQPLEHSYAN*CPTALL Trigger: GAGCAGTGCGGTTGGACACAAGTTTGCGTAGGAGTG...CTCGAGAGGCTGGTCCCTGGAGAACTGCGAACGAGCTGCAGAAAACCAGATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS CCA 90 bp | CTTGCTCCTTCACGAAATGATCCTGTGTGGGTTAGTTCTCCTCTCTaGGTTGCTGTTTCCTCATCTCCCAGTTGGGTGTATCTCCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LAPSRNDPVWVSSPL*VAVSSSPSWVYLPA Trigger: CGCAGGGAGATACACCCAACTGGGAGATGAGGAAACAGCAACCCAGAGAGGAGAACTAACCCACACAGGATCATTTCGTGAAGGAGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000359175.8 ENST00000497137.1 ENST00000497374.1 |
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| CDS-3UTR CAA 90 bp | CTCTGCAAAGGAGCCACTATATCAAAGCATTTAACTGGAGCTGTTGAGTTCCTGATCGGGCTGCAGACTTaGGCAAGGGGGCGAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LCKGATISKHLTGAVEFLIGLQT*ARGRRS Trigger: GCTTCTTCGCCCCCTTGCCAAAGTCTGCAGCCCGAT...CAGGAACTCAACAGCTCCAGTTAAATGCTTTGATATAGTGGCTCCTTTGCAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CAA 90 bp | AGTCACTGTATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTGAAGGGGCACGTCCTTaGGCGGTGGTAGAGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SHCIISGLKHNVACAKETEGARP*AVVEGR Trigger: CCGCCCCTCTACCACCGCCAAAGGACGTGCCCCTTC...AGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAATACAGTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CAA 90 bp | GCAAACTTGTGTCCAACCGCACTGCTCCCAGCGACTCCTTCCAGAAGAGAATGCTCCCACCCCATTTATTaGTCAAAAACCGAAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ANLCPTALLPATPSRRECSHPIY*SKTEES Trigger: GCTTTCTTCGGTTTTTGACAAATAAATGGGGTGGGA...GCATTCTCTTCTGGAAGGAGTCGCTGGGAGCAGTGCGGTTGGACACAAGTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617024.1 |
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| CDS CCA 90 bp | GTAGAGCCAGGAGAAATATTCCTTCACACGCCTCAAATCCATGGTTaGCTCCTTCAAGCTGCAGTAAGTTTGTCCATGTGGCTCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VEPGEIFLHTPQIHG*LLQAAVSLSMWLLL Trigger: CAGAAGGAGCCACATGGACAAACTTACTGCAGCTTGAAGGAGCCAACCATGGATTTGAGGCGTGTGAAGGAATATTTCTCCTGGCTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497137.1 |
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| CDS-3UTR CAA 90 bp | AGTCACTGTATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTCATCGAGAGCAGGGCTaGCTGAGAGTGGCGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SHCIISGLKHNVACAKETHREQG*LRVAED Trigger: GTCCTCCGCCACTCTCAGCAAGCCCTGCTCTCGATG...AGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAATACAGTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CAA 90 bp | ATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTAAAGAGACATCGCATCCTGCCACCTaGCCCGCGGTAGCTAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IISGLKHNVACAKETKETSHPAT*PAVARR Trigger: CCTCCTAGCTACCGCGGGCAAGGTGGCAGGATGCGA...TGTCTCTTTAGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS CCA 90 bp | GATAGTAGAGCCAGGAGAAATATTCCTTCACACGCCTCAAATCCATaGTTGGCTCCTTCAAGCTGCAGTAAGTTTGTCCATGTGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DSRARRNIPSHASNP*LAPSSCSKFVHVAP Trigger: AGGAGCCACATGGACAAACTTACTGCAGCTTGAAGGAGCCAACCATGGATTTGAGGCGTGTGAAGGAATATTTCTCCTGGCTCTACTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497137.1 |
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| CDS GCA 90 bp | AATATTCCTTCACACGCCTCAAATCCATGGTTGGCTCCTTCAAGCTaGAGTAAGTTTGTCCTAAGAAAGTCCAGGTCTGGTTCTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NIPSHASNPWLAPSS*SKFVLRKSRSGSSA Trigger: GGCTGAAGAACCAGACCTGGACTTTCTTAGGACAAACTTACTGCAGCTTGAAGGAGCCAACCATGGATTTGAGGCGTGTGAAGGAATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CAA 90 bp | ATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTAAAGAGACAGAGTGGCGGAGGACCTaGAAGGCTCCCGGTTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IISGLKHNVACAKETKETEWRRT*KAPGSV Trigger: TACAGAACCGGGAGCCTTCAAGGTCCTCCGCCACTC...TGTCTCTTTAGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CAA 90 bp | ATAGAGAAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACTTCCTCATCTCCCAGTaGGGTGTATCTCCCTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: IEKRVLFRSDSEGRHNSYFLISQ*GVSPCG Trigger: GCCGCAGGGAGATACACCCAACTGGGAGATGAGGAA...GTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTTCTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
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| CDS CCA 90 bp | GATAGTAGAGCCAGGAGAAATATTCCTTCACACGCCTCAAATCCATaGTTGGCTCCTTCAAGCTGCAGTAAGTTTGTCCTAAGAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DSRARRNIPSHASNP*LAPSSCSKFVLRKS Trigger: GGACTTTCTTAGGACAAACTTACTGCAGCTTGAAGGAGCCAACCATGGATTTGAGGCGTGTGAAGGAATATTTCTCCTGGCTCTACTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CAA 90 bp | GAGAAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACCTAGTTCTCCTCTCTGGGTaGCTGTTTCCTCATCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EKRVLFRSDSEGRHNSYLVLLSG*LFPHLP Trigger: TGGGAGATGAGGAAACAGCAACCCAGAGAGGAGAAC...TAGGTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
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| CDS CCA 90 bp | CTCCGTGATATAATCAGAATTTACTTGCCTAAGAAAGTCCAGGTCTaGTTCTTCAGCCTTGCTCCTTCACGAAATGATCCTGTGTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LRDIIRIYLPKKVQV*FFSLAPSRNDPVWV Trigger: AACCCACACAGGATCATTTCGTGAAGGAGCAAGGCTGAAGAACCAGACCTGGACTTTCTTAGGCAAGTAAATTCTGATTATATCACGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497374.1 |
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| CDS-3UTR CAA 90 bp | AATATGATTTGTGAGGTAAAGTCACTGTATTATCTCCGGTCTAAAGCACAATGTTCGTGCCCGGAGAACTaGTGTGTGCCCACTCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: NMICEVKSLYYLRSKAQCSCPEN*CVPTHK Trigger: CTTGTGAGTGGGCACACACAAGTTCTCCGGGCACGA...ACATTGTGCTTTAGACCGGAGATAATACAGTGACTTTACCTCACAAATCATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CAA 90 bp | CAGAATATGATTTGTGAGGTAAAGTCACTGTATTATCTCCGGTCTAAAGCACAACACTCCTACGCAAACTaGTGTCCAACCGCACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QNMICEVKSLYYLRSKAQHSYAN*CPTALL Trigger: GAGCAGTGCGGTTGGACACAAGTTTGCGTAGGAGTG...TTGTGCTTTAGACCGGAGATAATACAGTGACTTTACCTCACAAATCATATTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CAA 90 bp | GTTCCTGCTGGTAGAATATTACTTCCAGCCTATTTATTAGCTTGTCTTCCGGTGCCGCCCTCAGGACTCTaGCTAAAACTCAAATTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: VPAGRILLPAYLLACLPVPPSGL*LKLKFY Trigger: GTAGAATTTGAGTTTTAGCAAGAGTCCTGAGGGCGG...CACCGGAAGACAAGCTAATAAATAGGCTGGAAGTAATATTCTACCAGCAGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CAA 90 bp | CATACATTAATATTTATTGGGAGGAAAGCAAAACTGCAAAACGTAGTCTTTGGCTTCCTCATCTCCCAGTaGGGTGTATCTCCCTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: HTLIFIGRKAKLQNVVFGFLISQ*GVSPCG Trigger: GCCGCAGGGAGATACACCCAACTGGGAGATGAGGAA...GCCAAAGACTACGTTTTGCAGTTTTGCTTTCCTCCCAATAAATATTAATGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CAA 90 bp | ATATCAAAGCATTTAACTGGAGCTGTTGAGTTCCTGCTGGTAGAATATTACTTCGTTCTCCTCTCTGGGTaGCTGTTTCCTCATCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ISKHLTGAVEFLLVEYYFVLLSG*LFPHLP Trigger: TGGGAGATGAGGAAACAGCAACCCAGAGAGGAGAAC...GAAGTAATATTCTACCAGCAGGAACTCAACAGCTCCAGTTAAATGCTTTGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS TCA 90 bp | CCAAAGGTCTTCAAGGGTAAGATGCTGCTCCATTTAAATAAAAGATaGAGGATGTCGAAACACAAGCAGCCTTTAACCAGTAGACCCATA | + |
|
Preference number: 5 (lower is better) Translates to: PKVFKGKMLLHLNKR*RMSKHKQPLTSRPI Trigger: TATGGGTCTACTGGTTAAAGGCTGCTTGTGTTTCGACATCCTTCATCTTTTATTTAAATGGAGCAGCATCTTACCCTTGAAGACCTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497374.1 |
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| CDS-3UTR CAA 90 bp | AGTCACTGTATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTTCCCACCCCATTTATTaGTCAAAAACCGAAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SHCIISGLKHNVACAKETSHPIY*SKTEES Trigger: GCTTTCTTCGGTTTTTGACAAATAAATGGGGTGGGA...AGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAATACAGTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CAA 90 bp | AAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACCTAAATAGCCTATTTATTAGCTaGTCTTCCGGTGGCCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: KRVLFRSDSEGRHNSYLNSLFIS*SSGGPI Trigger: TATTGGGCCACCGGAAGACAAGCTAATAAATAGGCT...ATTTAGGTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CAA 90 bp | AGTCACTGTATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTTTAATAAATCTTGTTTaGGCTCTGCAAAGGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SHCIISGLKHNVACAKETLINLV*ALQRSH Trigger: GTGGCTCCTTTGCAGAGCCAAAACAAGATTTATTAA...AGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAATACAGTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS-3UTR CAA 90 bp | AAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACCTAAATGCTAATGATTTGGTATaGATAGTAGAGCCAGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KRVLFRSDSEGRHNSYLNANDLV*IVEPGE Trigger: TTCTCCTGGCTCTACTATCAATACCAAATCATTAGC...ATTTAGGTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
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| CDS-3UTR CAA 90 bp | CACTGTATTATCTCCGGTCTAAAGCACAATGTAGCATGTGCAAAAGAAACTAAAGCTAATGATTTGGTATaGATAGTAGAGCCAGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HCIISGLKHNVACAKETKANDLV*IVEPGE Trigger: TTCTCCTGGCTCTACTATCAATACCAAATCATTAGC...TTTAGTTTCTTTTGCACATGCTACATTGTGCTTTAGACCGGAGATAATACAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
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| CDS-3UTR CAA 90 bp | AAGAGAGTGCTTTTCAGGTCAGATAGTGAAGGAAGACACAATAGTTACCTAAATACAGCAGCTAATGATTaGGTATTGATAGTAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KRVLFRSDSEGRHNSYLNTAAND*VLIVEP Trigger: TGGCTCTACTATCAATACCAAATCATTAGCTGCTGT...ATTTAGGTAACTATTGTGTCTTCCTTCACTATCTGACCTGAAAAGCACTCTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000497137.1 |
||
| CDS-3UTR CAA 90 bp | CATACATTAATATTTATTGGGAGGAAAGCAAAACTGCAAAACGTAGTCTTTGGCACAGCAGCTAATGATTaGGTATTGATAGTAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HTLIFIGRKAKLQNVVFGTAAND*VLIVEP Trigger: TGGCTCTACTATCAATACCAAATCATTAGCTGCTGT...GCCAAAGACTACGTTTTGCAGTTTTGCTTTCCTCCCAATAAATATTAATGTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359175.8 |
||
| CDS-3UTR CAA 90 bp | AATATGATTTGTGAGGTAAAGTCACTGTATTATCTCCGGTCTAAAGCACAATGTAACATGCAAGTTAATTaGGCATGCCAAACATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NMICEVKSLYYLRSKAQCNMQVN*ACQTSF Trigger: GAAAGATGTTTGGCATGCCAAATTAACTTGCATGTT...ACATTGTGCTTTAGACCGGAGATAATACAGTGACTTTACCTCACAAATCATATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS CCA 72 bp | CCCAGCTGCTGCGAGCTTCCCACTGCGCCGGGCGCCTaGGAGCCTCCCGGAGTTAGGTGTTCGGCCCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: PSCCELPTAPGA*EPPGVRCSAPP Trigger: GGGCGGGGCCGAACACCTAACTCCGGGAGGCTCCCAGGCGCCCGGCGCAGTGGGAAGCTCGCAGCAGCTGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS CCA 72 bp | GGCAAACTGGGGAAAGAAGGCTGGGAGGCGGCCCGGTaGTGCAGAGACGCGCGGCGCCTGCTCCCGCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: GKLGKEGWEAAR*CRDARRLLPRL Trigger: GAGCCGCGGGAGCAGGCGCCGCGCGTCTCTGCACCACCGGGCCGCCTCCCAGCCTTCTTTCCCCAGTTTGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000617024.1 |
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| CDS GCA 72 bp | CGCTCAGGGAAAGCCCGCGCCCAGCATCCATCGGGCTaGAGACTTTGGCAAGGGGGCGAAGAAGCCCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RSGKARAQHPSG*RLWQGGEEARV Trigger: CACCCGGGCTTCTTCGCCCCCTTGCCAAAGTCTGCAGCCCGATGGATGCTGGGCGCGGGCTTTCCCTGAGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000617024.1 |
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| CDS GCA 72 bp | CTCCCGGTTCTGTATCTCCGTGGCCGAGACGCTTTCTaGTCGAGGCCCAGGGGAGTCCGGGAGCGAAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LPVLYLRGRDAF*SRPRGVRERKP Trigger: AGGCTTTCGCTCCCGGACTCCCCTGGGCCTCGAGCAGAAAGCGTCTCGGCCACGGAGATACAGAACCGGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS CCA 72 bp | CGGAGGACCTTGAAGGCTCCCGGTTCTGTATCTCCGTaGCCGAGACGCTTTCTGCTCGAGGCCCAGGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: RRTLKAPGSVSP*PRRFLLEAQGS Trigger: ACTCCCCTGGGCCTCGAGCAGAAAGCGTCTCGGCCACGGAGATACAGAACCGGGAGCCTTCAAGGTCCTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS TCA 72 bp | TCGAGAGCAGGGCTTGCTGAGAGTGGCGGAGGACCTTaGAGGCTCCCGGTTCTGTATCTCCGTGGCCGAGAC | + |
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Preference number: 6 (lower is better) Translates to: SRAGLAESGGGP*RLPVLYLRGRD Trigger: GTCTCGGCCACGGAGATACAGAACCGGGAGCCTTCAAGGTCCTCCGCCACTCTCAGCAAGCCCTGCTCTCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS TCA 72 bp | CCCAGCGATCTCCTCTCCATCGAGAGCAGGGCTTGCTaGGAGTGGCGGAGGACCTTGAAGGCTCCCGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: PSDLLSIESRAC*EWRRTLKAPGS Trigger: AGAACCGGGAGCCTTCAAGGTCCTCCGCCACTCTCAGCAAGCCCTGCTCTCGATGGAGAGGAGATCGCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000617024.1 |
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| CDS GCA 72 bp | TGCTGTTTCCTCATCTCCCAGTTGGGTGTATCTCCCTaGGGCTTAGGTGAGCGCCGAGGCTTTGGCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: CCFLISQLGVSP*GLGERRGFGSS Trigger: GGAGGAGCCAAAGCCTCGGCGCTCACCTAAGCCGCAGGGAGATACACCCAACTGGGAGATGAGGAAACAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000359175.8 ENST00000497137.1 ENST00000497374.1 |
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| CDS GCA 72 bp | TCGTGCCCGGAGAACTTGTGTGTGCCCACTCACAAGTaGAGAGAATTAATCTCGGCCCGGACTGCGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SCPENLCVPTHK*RELISARTAAG Trigger: TCCTGCCGCAGTCCGGGCCGAGATTAATTCTCTGCACTTGTGAGTGGGCACACACAAGTTCTCCGGGCACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359175.8 ENST00000617024.1 |
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| CDS CCA 72 bp | GAGGGCCCAGGAATGAGCACTAAGAAAGTCCAGGTCTaGTTCTTCAGCCTTGCTCCTTCACGAAATGATCCT | + |
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Preference number: 6 (lower is better) Translates to: EGPGMSTKKVQV*FFSLAPSRNDP Trigger: AGGATCATTTCGTGAAGGAGCAAGGCTGAAGAACCAGACCTGGACTTTCTTAGTGCTCATTCCTGGGCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497137.1 |
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| CDS CAA 72 bp | GAAATGATCCTGTGTGGGTTAGTTCTCCTCTCTGGGTaGCTGTTTCCTCATCTCCCAGTTGGGTGTATCTCC | + |
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Preference number: 6 (lower is better) Translates to: EMILCGLVLLSG*LFPHLPVGCIS Trigger: GGAGATACACCCAACTGGGAGATGAGGAAACAGCAACCCAGAGAGGAGAACTAACCCACACAGGATCATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000359175.8 ENST00000497137.1 ENST00000497374.1 |
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| CDS GCA 72 bp | TCACACGCCTCAAATCCATGGTTGGCTCCTTCAAGCTaGAGTAAGTTTGTCCTAAGAAAGTCCAGGTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SHASNPWLAPSS*SKFVLRKSRSG Trigger: ACCAGACCTGGACTTTCTTAGGACAAACTTACTGCAGCTTGAAGGAGCCAACCATGGATTTGAGGCGTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS CCA 72 bp | TTCTTCAGCCTTGCTCCTTCACGAAATGATCCTGTGTaGGTTAGTTCTCCTCTCTGGGTTGCTGTTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: FFSLAPSRNDPV*VSSPLWVAVSS Trigger: TGAGGAAACAGCAACCCAGAGAGGAGAACTAACCCACACAGGATCATTTCGTGAAGGAGCAAGGCTGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000359175.8 ENST00000497137.1 ENST00000497374.1 |
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| CDS CAA 72 bp | TGCTATGCAATTCTAACACTGGCACTTGTGCTGGGATaGGCCTCTTCTAGGCTAGGAGTTCTTAACCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: CYAILTLALVLG*ASSRLGVLNLE Trigger: CTCCAGGTTAAGAACTCCTAGCCTAGAAGAGGCCAATCCCAGCACAAGTGCCAGTGTTAGAATTGCATAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497374.1 |
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| CDS CAA 90 bp | AGTAGAGCCAGGAGAAATATTCCTTCACACGCCTCAAATCCATGGTaGGCTCCTTCAAGCTGCAGTAAGTTTGTCCATGTGGCTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SRARRNIPSHASNPW*APSSCSKFVHVAPS Trigger: AGAAGGAGCCACATGGACAAACTTACTGCAGCTTGAAGGAGCCAACCATGGATTTGAGGCGTGTGAAGGAATATTTCTCCTGGCTCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497137.1 |
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| CDS CAA 90 bp | AGTAGAGCCAGGAGAAATATTCCTTCACACGCCTCAAATCCATGGTaGGCTCCTTCAAGCTGCAGTAAGTTTGTCCTAAGAAAGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SRARRNIPSHASNPW*APSSCSKFVLRKSR Trigger: CCTGGACTTTCTTAGGACAAACTTACTGCAGCTTGAAGGAGCCAACCATGGATTTGAGGCGTGTGAAGGAATATTTCTCCTGGCTCTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS CCA 72 bp | GCCAGGAGAAATATTCCTTCACACGCCTCAAATCCATaGTTGGCTCCTTCAAGCTGCAGTAAGTTTGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: ARRNIPSHASNP*LAPSSCSKFVL Trigger: TAGGACAAACTTACTGCAGCTTGAAGGAGCCAACCATGGATTTGAGGCGTGTGAAGGAATATTTCTCCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359175.8 |
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| CDS CCA 72 bp | GGAGAAATATTCCTTCACACGCCTCAAATCCATGGTTaGCTCCTTCAAGCTGCAGTAAGTTTGTCCATGTGG | + |
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Preference number: 6 (lower is better) Translates to: GEIFLHTPQIHG*LLQAAVSLSMW Trigger: CCACATGGACAAACTTACTGCAGCTTGAAGGAGCCAACCATGGATTTGAGGCGTGTGAAGGAATATTTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497137.1 |
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| CDS CCA 72 bp | GCCAGGAGAAATATTCCTTCACACGCCTCAAATCCATaGTTGGCTCCTTCAAGCTGCAGTAAGTTTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: ARRNIPSHASNP*LAPSSCSKFVH Trigger: ATGGACAAACTTACTGCAGCTTGAAGGAGCCAACCATGGATTTGAGGCGTGTGAAGGAATATTTCTCCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497137.1 |
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| CDS TCA 72 bp | GCACACGTTTCAAAGGAACTTGGAATATCCGTAAGTTaGGACCTCCAAATTACTAGAGCTAATTGCCCCATT | + |
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Preference number: 6 (lower is better) Translates to: AHVSKELGISVS*DLQITRANCPI Trigger: AATGGGGCAATTAGCTCTAGTAATTTGGAGGTCTCAACTTACGGATATTCCAAGTTCCTTTGAAACGTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497374.1 |
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| CDS CCA 72 bp | ATAATCAGAATTTACTTGCCTAAGAAAGTCCAGGTCTaGTTCTTCAGCCTTGCTCCTTCACGAAATGATCCT | + |
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Preference number: 6 (lower is better) Translates to: IIRIYLPKKVQV*FFSLAPSRNDP Trigger: AGGATCATTTCGTGAAGGAGCAAGGCTGAAGAACCAGACCTGGACTTTCTTAGGCAAGTAAATTCTGATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497374.1 |
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