RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPTBN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000173898

Ensembl transcript IDs: ENST00000309996.6, ENST00000309996.7, ENST00000529997.5, ENST00000530665.1, ENST00000530775.1, ENST00000532650.1, ENST00000532902.1, ENST00000533211.6, ENST00000611817.5, ENST00000617502.4, ENST00000617502.5, ENST00000647510.2, ENST00000682471.1

Found 1187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCCCCGACGGGTGACACTGGGGGCATGGTCATGGCCCGGGTCATaGCCCGGGTGGTGCTGGGCACCACCGGCTCTTCAGGCTCTCCAG +
Preference number: 1 (lower is better)
Translates to: QPRRVTLGAWSWPGS*PGWCWAPPALQALQ
Trigger: CTGGAGAGCCTGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGTGTCACCCGTCGGGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR GCA 90 bp GTGACACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTaGTGGGCACCACCGGCTCTTCAGGCTCTCCAGAGGCAGAAGACG +
Preference number: 1 (lower is better)
Translates to: VTLGAWSWPGSCPGW*WAPPALQALQRQKT
Trigger: CGTCTTCTGCCTCTGGAGAGCCTGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGTGTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR CCA 90 bp ACACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTaGGCACCACCGGCTCTTCAGGCTCTCCAGAGGCAGAAGACGCTG +
Preference number: 1 (lower is better)
Translates to: TLGAWSWPGSCPGWC*APPALQALQRQKTL
Trigger: CAGCGTCTTCTGCCTCTGGAGAGCCTGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR TCA 90 bp CTGCCCCCAGGGCCTGCTTCAGCTCTGAGAGGTTCCTGGCTGGTCTaGGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCTCGCATG +
Preference number: 1 (lower is better)
Translates to: LPPGPASALRGSWLV*GVRNQKAEGECPRM
Trigger: CATGCGAGGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAAGCAGGCCCTGGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR CCA 90 bp GCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTaGCAGTTTCCTGAACGGAGGGAGGGAGTTGGCCTGGGACCTTGC +
Preference number: 1 (lower is better)
Translates to: AGSCPDKRAVPVDCP*QFPERREGVGLGPC
Trigger: GCAAGGTCCCAGGCCAACTCCCTCCCTCCGTTCAGGAAACTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR CCA 90 bp CATGGCAGGAGAATGACCCTGAGGCAGGGGCAGCCACTCCCCACATaGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGA +
Preference number: 1 (lower is better)
Translates to: HGRRMTLRQGQPLPT*PMLRVRHCPHRGEG
Trigger: TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGGCTGCCCCTGCCTCAGGGTCATTCTCCTGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR TCA 90 bp GACTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTaGGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACAGGGTGGG +
Preference number: 1 (lower is better)
Translates to: DSRRWLSPNNTPGSH*EQLEMEWQLELQGG
Trigger: CCCACCCTGTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR CCA 90 bp TCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAACAACACACCTaGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTT +
Preference number: 1 (lower is better)
Translates to: SLARLKAVAVPEQHT*KPLRAAGDGVAAGV
Trigger: AACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR TCA 90 bp TGTGACACGGCTCTTCAAGAGCTTGGAGGCTGGGGAAACGTGAGATaGAGGAGACCAGAACGGAAGGAGAGGACACAGGCTTGGGCAGAG +
Preference number: 1 (lower is better)
Translates to: CDTALQELGGWGNVR*RRPERKERTQAWAE
Trigger: CTCTGCCCAAGCCTGTGTCCTCTCCTTCCGTTCTGGTCTCCTTCATCTCACGTTTCCCCAGCCTCCAAGCTCTTGAAGAGCCGTGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 90 bp CGCATATGCAGATGCTGCTCGGGGTCTTCAGTCTCACCTCTCCGTTaGCAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCC +
Preference number: 1 (lower is better)
Translates to: RICRCCSGSSVSPLR*QCLPLLQDCFNWLS
Trigger: GGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAACGGAGAGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 90 bp GTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTaGTCTACTGGAGAGCAGACGGCAAGTGGGGGCAGTAAGCACCCG +
Preference number: 1 (lower is better)
Translates to: VYWNLPLLRSLSEVP*STGEQTASGGSKHP
Trigger: CGGGTGCTTACTGCCCCCACTTGCCGTCTGCTCTCCAGTAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CCA 90 bp AAATTATCCTGCAGGCTCTCTGGTCTACCGGTTTGGAGCCCACTCTaGGGCTGTGATGTGCTAGTTCTGGGCCTGCACACACCTAACTCG +
Preference number: 1 (lower is better)
Translates to: KLSCRLSGLPVWSPL*GCDVLVLGLHTPNS
Trigger: CGAGTTAGGTGTGTGCAGGCCCAGAACTAGCACATCACAGCCCCAGAGTGGGCTCCAAACCGGTAGACCAGAGAGCCTGCAGGATAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CCA 90 bp ATCTTAAGGGGGAAATTATCCTGCAGGCTCTCTGGTCTACCGGTTTaGAGCCCACTCTGGGGCTGTGATGTGCTAGTTCTGGGCCTGCAC +
Preference number: 1 (lower is better)
Translates to: ILRGKLSCRLSGLPV*SPLWGCDVLVLGLH
Trigger: GTGCAGGCCCAGAACTAGCACATCACAGCCCCAGAGTGGGCTCCAAACCGGTAGACCAGAGAGCCTGCAGGATAATTTCCCCCTTAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 90 bp TCACTGTCAGAGGGAAATGAGACCAGGTCAGGGAAGCTCTCAGTGTaGCACGGCTCTTCAAGAGCTTGGAGGCTGGGGAAACGTGAGATG +
Preference number: 1 (lower is better)
Translates to: SLSEGNETRSGKLSV*HGSSRAWRLGKREM
Trigger: CATCTCACGTTTCCCCAGCCTCCAAGCTCTTGAAGAGCCGTGTCACACTGAGAGCTTCCCTGACCTGGTCTCATTTCCCTCTGACAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CCA 90 bp TCGACTGTCCCTGGCAGTTTCCTGAACGGAGGGAGGGAGTTGGCCTaGGACCTTGCCCCCAACTACTTGTTCTTCTTAAAGAAGCTGAAG +
Preference number: 1 (lower is better)
Translates to: STVPGSFLNGGRELA*DLAPNYLFFLKKLK
Trigger: CTTCAGCTTCTTTAAGAAGAACAAGTAGTTGGGGGCAAGGTCCCAGGCCAACTCCCTCCCTCCGTTCAGGAAACTGCCAGGGACAGTCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR TCA 90 bp CTGTTGATCAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTaGGGTCCCTTGATCTACTGGAGAGCAGACGGCAAGTGGGGGCAG +
Preference number: 1 (lower is better)
Translates to: LLISLLEPATSQIPV*GPLIYWRADGKWGQ
Trigger: CTGCCCCCACTTGCCGTCTGCTCTCCAGTAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTGATCAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 90 bp AGGAGTGCCCACTTCCATCAACATCTGGAGACAAACACTGTGCCCTaGAAGCTCCGATTGCCAAACCAGAGACAAAGGAGAAGCCACCCG +
Preference number: 1 (lower is better)
Translates to: RSAHFHQHLETNTVP*KLRLPNQRQRRSHP
Trigger: CGGGTGGCTTCTCCTTTGTCTCTGGTTTGGCAATCGGAGCTTTCAGGGCACAGTGTTTGTCTCCAGATGTTGATGGAAGTGGGCACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 90 bp GGCTGTGGAACAGTAAATCTACCCATCTTAAGGGGGAAATTATCCTaGAGGCTCTCTGGTCTACCGGTTTGGAGCCCACTCTGGGGCTGT +
Preference number: 1 (lower is better)
Translates to: GCGTVNLPILRGKLS*RLSGLPVWSPLWGC
Trigger: ACAGCCCCAGAGTGGGCTCCAAACCGGTAGACCAGAGAGCCTGCAGGATAATTTCCCCCTTAAGATGGGTAGATTTACTGTTCCACAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 90 bp CCCCTCTTCTATGTCCTGTTCTTAAGGAATCATGCCCTGAAGTCCTaGTGCCGCATATGCAGATGCTGCTCGGGGTCTTCAGTCTCACCT +
Preference number: 1 (lower is better)
Translates to: PLFYVLFLRNHALKS*CRICRCCSGSSVSP
Trigger: AGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGACATAGAAGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CCA 90 bp AGAGTCATGACACACTTGGTTTGGCTACATCTCAGTAGCCACACATaGCTGGGTGGCTGCTGCTGTGGACAGCATGGACCTAAAGTCCAC +
Preference number: 1 (lower is better)
Translates to: RVMTHLVWLHLSSHT*LGGCCCGQHGPKVH
Trigger: GTGGACTTTAGGTCCATGCTGTCCACAGCAGCAGCCACCCAGCCATGTGTGGCTACTGAGATGTAGCCAAACCAAGTGTGTCATGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 90 bp CACCAAGGAGTGCCCACTTCCATCAACATCTGGAGACAAACACTGTaGCCTGAAAGCTCCGATTGCCAAACCAGAGACAAAGGAGAAGCC +
Preference number: 1 (lower is better)
Translates to: HQGVPTSINIWRQTL*PESSDCQTRDKGEA
Trigger: GGCTTCTCCTTTGTCTCTGGTTTGGCAATCGGAGCTTTCAGGGCACAGTGTTTGTCTCCAGATGTTGATGGAAGTGGGCACTCCTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 90 bp CTCTTCTATGTCCTGTTCTTAAGGAATCATGCCCTGAAGTCCTGCTaGCGCATATGCAGATGCTGCTCGGGGTCTTCAGTCTCACCTCTC +
Preference number: 1 (lower is better)
Translates to: LFYVLFLRNHALKSC*RICRCCSGSSVSPL
Trigger: GAGAGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGACATAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CCA 90 bp TCCATGCTTCATACCTGGTGTTTCAGAGTCATGACACACTTGGTTTaGCTACATCTCAGTAGCCACACATGGCTGGGTGGCTGCTGCTGT +
Preference number: 1 (lower is better)
Translates to: SMLHTWCFRVMTHLV*LHLSSHTWLGGCCC
Trigger: ACAGCAGCAGCCACCCAGCCATGTGTGGCTACTGAGATGTAGCCAAACCAAGTGTGTCATGACTCTGAAACACCAGGTATGAAGCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 90 bp GGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGAAACAATaGAAGAACACGCTTTTCCTGTTGGAGGCCACCAAGGAGTGCCCA +
Preference number: 1 (lower is better)
Translates to: GCLPGKTVVCVYRKQ*KNTLFLLEATKECP
Trigger: TGGGCACTCCTTGGTGGCCTCCAACAGGAAAAGCGTGTTCTTTCATTGTTTCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 90 bp CTTCTGACATTTCCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTaGCAGCTTGGAGTGCAAATACCTAGATTCCCTGAGCACCCCCAA +
Preference number: 1 (lower is better)
Translates to: LLTFPIIVSLQCPQA*QLGVQIPRFPEHPQ
Trigger: TTGGGGGTGCTCAGGGAATCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGGAAATGTCAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CCA 90 bp TACTTTGGTTTAAAAAGAGGCTTGGCATTGGTCAACCCAGCACACTaGAGGTCACTGTCAGAGGGAAATGAGACCAGGTCAGGGAAGCTC +
Preference number: 1 (lower is better)
Translates to: YFGLKRGLALVNPAH*RSLSEGNETRSGKL
Trigger: GAGCTTCCCTGACCTGGTCTCATTTCCCTCTGACAGTGACCTCCAGTGTGCTGGGTTGACCAATGCCAAGCCTCTTTTTAAACCAAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 90 bp TCCATCAACATCTGGAGACAAACACTGTGCCCTGAAAGCTCCGATTaGCAAACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATA +
Preference number: 1 (lower is better)
Translates to: SINIWRQTLCPESSD*QTRDKGEATRSFLI
Trigger: TATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGTTTGGCAATCGGAGCTTTCAGGGCACAGTGTTTGTCTCCAGATGTTGATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 90 bp GGCTGTAAAGTCACCTCATGGCTTCCCAGAGTGACTTCATTCTGTTaGTCAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAG +
Preference number: 1 (lower is better)
Translates to: GCKVTSWLPRVTSFC*SVYWNLPLLRSLSE
Trigger: CTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTGATCAACAGAATGAAGTCACTCTGGGAAGCCATGAGGTGACTTTACAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 90 bp AGTTGTTGTCCTCTTCCATGCTTCATACCTGGTGTTTCAGAGTCATaGCACACTTGGTTTGGCTACATCTCAGTAGCCACACATGGCTGG +
Preference number: 1 (lower is better)
Translates to: SCCPLPCFIPGVSES*HTWFGYISVATHGW
Trigger: CCAGCCATGTGTGGCTACTGAGATGTAGCCAAACCAAGTGTGTCATGACTCTGAAACACCAGGTATGAAGCATGGAAGAGGACAACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 90 bp CATATACATTTCCTTCTGACATTTCCAATTATTGTTTCCCTTCAGTaGCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGATTCCCT +
Preference number: 1 (lower is better)
Translates to: HIHFLLTFPIIVSLQ*PQACQLGVQIPRFP
Trigger: AGGGAATCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGGAAATGTCAGAAGGAAATGTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 90 bp TATTTACATGCTTGGGCTGTAAAGTCACCTCATGGCTTCCCAGAGTaGCTTCATTCTGTTGATCAGTTTATTGGAACCTGCCACTTCTCA +
Preference number: 1 (lower is better)
Translates to: YLHAWAVKSPHGFPE*LHSVDQFIGTCHFS
Trigger: TGAGAAGTGGCAGGTTCCAATAAACTGATCAACAGAATGAAGTCACTCTGGGAAGCCATGAGGTGACTTTACAGCCCAAGCATGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 90 bp AGAAAATTGTGCACCAGGGAAGGAGTCCCTCATTGCTTTTTAACATaGATACTGCTTGTTGACATCATCCCAACCCATGGTGAACTACTT +
Preference number: 1 (lower is better)
Translates to: RKLCTREGVPHCFLT*ILLVDIIPTHGELL
Trigger: AAGTAGTTCACCATGGGTTGGGATGATGTCAACAAGCAGTATTCATGTTAAAAAGCAATGAGGGACTCCTTCCCTGGTGCACAATTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CCA 90 bp AAATTAAGGTATTTAAAGTTGTTGTCCTCTTCCATGCTTCATACCTaGTGTTTCAGAGTCATGACACACTTGGTTTGGCTACATCTCAGT +
Preference number: 1 (lower is better)
Translates to: KLRYLKLLSSSMLHT*CFRVMTHLVWLHLS
Trigger: ACTGAGATGTAGCCAAACCAAGTGTGTCATGACTCTGAAACACCAGGTATGAAGCATGGAAGAGGACAACAACTTTAAATACCTTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR CCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGAGGGTCATGCCCCGGGTaGTGCTGGGCACCACCGGCT +
Preference number: 2 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGGSCPG*CWAPPA
Trigger: AGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCC...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR TCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAATCCCTGGCAGTTTCCTaGACGGAGGGAGGGAGTTGG +
Preference number: 2 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKSLAVS*TEGGSW
Trigger: CCAACTCCCTCCCTCCGTTCAGGAAACTGCCAGGGA...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAAGCAGGCAGTTGTCCTaGCAAGAGGGCGGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKSRQLS*QEGGPC
Trigger: ACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCT...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp ATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGGCTCTTCATCAAGGACACTGTGCTaGGTTGGCCGCAGTGGACAG +
Preference number: 2 (lower is better)
Translates to: MVMARVMPRVVLGTTGSSSRTLC*VGRSGQ
Trigger: CTGTCCACTGCGGCCAACTCAGCACAGTGTCCTTGA...TGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR CCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGAAGAAGTCGGCGGGGGTaGGAGAGGGGGTTACCTGGG +
Preference number: 2 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGRSRRG*ERGLPG
Trigger: CCCAGGTAACCCCCTCTCCCACCCCCGCCGACTTCT...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGAGAAGTCGGCGGGGGTaGGAGAGGGGGTTACCTGGG +
Preference number: 2 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGERSRRG*ERGLPG
Trigger: CCCAGGTAACCCCCTCTCCCACCCCCGCCGACTTCT...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAATGGACTCGTCCCCAGTaGCAGTTCCTGGTGATGGGT +
Preference number: 2 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGEWTRPQ*QFLVMG
Trigger: ACCCATCACCAGGAACTGTCACTGGGGACGAGTCCA...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAATGGACTCGTCCCCAGTaGCAGTTCCTGGTGATGGGT +
Preference number: 2 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKWTRPQ*QFLVMG
Trigger: ACCCATCACCAGGAACTGTCACTGGGGACGAGTCCA...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAACCTGTCGACTGTCCCTaGCAGTTTCCTGAACGGAGG +
Preference number: 2 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGEPVDCP*QFPERR
Trigger: CCTCCGTTCAGGAAACTGCCAGGGACAGTCGACAGG...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGCAGCCACTCCCCACATaGCCTATGTTGAGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQQPLPT*PMLRVR
Trigger: CCGCACCCTCAACATAGGCCATGTGGGGAGTGGCTG...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGTCCCTGGCAGTTTCCTaGACGGAGGGAGGGAGTTGG +
Preference number: 2 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGESLAVS*TEGGSW
Trigger: CCAACTCCCTCCCTCCGTTCAGGAAACTGCCAGGGA...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGTGGACTCGTCCCCAGTaGCAGTTCCTGGTGATGGGT +
Preference number: 2 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQWTRPQ*QFLVMG
Trigger: ACCCATCACCAGGAACTGTCACTGGGGACGAGTCCA...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTAGAAGTCGGCGGGGGTaGGAGAGGGGGTTACCTGGG +
Preference number: 2 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAARSRRG*ERGLPG
Trigger: CCCAGGTAACCCCCTCTCCCACCCCCGCCGACTTCT...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGAGACACTGTGCTGAGTTaGCCGCAGTGGACAGCAGGG +
Preference number: 2 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGDTVLS*PQWTAG
Trigger: CCCTGCTGTCCACTGCGGCCAACTCAGCACAGTGTC...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR TCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGATGGACTCGTCCCCAGTaGCAGTTCCTGGTGATGGGT +
Preference number: 2 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGWTRPQ*QFLVMG
Trigger: ACCCATCACCAGGAACTGTCACTGGGGACGAGTCCA...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR GCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCTCATGCCCCGGGTGGTaGTGGGCACCACCGGCTCTT +
Preference number: 2 (lower is better)
Translates to: KLSCLITSLARLKAVAVPSCPGW*WAPPAL
Trigger: AAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGA...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR TCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGACCACATGGCCTATGTTaGGGGTGCGGCACTGTCCAC +
Preference number: 2 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRPHGLC*GCGTVH
Trigger: GTGGACAGTGCCGCACCCTCAACATAGGCCATGTGG...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTCCACATGGCCTATGTTaGGGGTGCGGCACTGTCCAC +
Preference number: 2 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAAPHGLC*GCGTVH
Trigger: GTGGACAGTGCCGCACCCTCAACATAGGCCATGTGG...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCTCAGCCCCGACGGGTaGCACTGGGGGCATGGTCAT +
Preference number: 2 (lower is better)
Translates to: EKLSCLITSLARLKAVAVLSPDG*HWGHGH
Trigger: ATGACCATGCCCCCAGTGTCACCCGTCGGGGCTGAG...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR GCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGAGCAGAAGAGAAGGGCTaGCCTTGGGAACATGGACTC +
Preference number: 2 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGAEEKG*PWEHGL
Trigger: GAGTCCATGTTCCCAAGGGCAGCCCTTCTCTTCTGC...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR GCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGATCTGCCCCCAGGGCCTaGTTCAGCTCTGAGAGGTTC +
Preference number: 2 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRSAPRA*FSSERF
Trigger: GAACCTCTCAGAGCTGAAGCAGGCCCTGGGGGCAGA...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGGAGAGGGGGTTACCTaGGTCCCACCACCAGTCTGG +
Preference number: 2 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGGEGVT*VPPPVW
Trigger: CCAGACTGGTGGTGGGACCCAGGTAACCCCCTCTCC...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGCTCATCTCTGCCTGTaGATGGAAAGACCCTCAATC +
Preference number: 2 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKAHLCL*MERPSI
Trigger: GATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGC...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR CAA 90 bp AGACTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATaGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACAGGGTGG +
Preference number: 2 (lower is better)
Translates to: RLKAVAVPEQHTWKP*RAAGDGVAAGVTGW
Trigger: CCACCCTGTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGGCTGGTCTGAGGGGTaGGGAACCAGAAGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: KLSCLITSLARLKAVAVPGWSEG*GTRRQK
Trigger: CTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCC...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGGCCTGCTTCAGCTCTaGGAGGTTCCTGGCTGGTCT +
Preference number: 2 (lower is better)
Translates to: KLSCLITSLARLKAVAVPGLLQL*EVPGWS
Trigger: AGACCAGCCAGGAACCTCTCAGAGCTGAAGCAGGCC...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCGGCCTGCTTCAGCTCTaGGAGGTTCCTGGCTGGTCT +
Preference number: 2 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPGLLQL*EVPGWS
Trigger: AGACCAGCCAGGAACCTCTCAGAGCTGAAGCAGGCC...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGGGCTCCTGCGCCTCTaGCTGTCATCTGGCACTTCT +
Preference number: 2 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGGLLRL*LSSGTS
Trigger: AGAAGTGCCAGATGACAGTCAGAGGCGCAGGAGCCC...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGGGCTCCTGCGCCTCTaGCTGTCATCTGGCACTTCT +
Preference number: 2 (lower is better)
Translates to: KLSCLITSLARLKAVAVPGLLRL*LSSGTS
Trigger: AGAAGTGCCAGATGACAGTCAGAGGCGCAGGAGCCC...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR GCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCTCTGCCCCCAGGGCCTaGTTCAGCTCTGAGAGGTTC +
Preference number: 2 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPSAPRA*FSSERF
Trigger: GAACCTCTCAGAGCTGAAGCAGGCCCTGGGGGCAGA...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR GCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGTCATCTGGCACTTCTaGCCCCAGGGCCTGCTTCAG +
Preference number: 2 (lower is better)
Translates to: KLSCLITSLARLKAVAVPVIWHF*PQGLLQ
Trigger: CTGAAGCAGGCCCTGGGGGCAGAAGTGCCAGATGAC...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR GCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTCATCTGGCACTTCTaGCCCCAGGGCCTGCTTCAG +
Preference number: 2 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGVIWHF*PQGLLQ
Trigger: CTGAAGCAGGCCCTGGGGGCAGAAGTGCCAGATGAC...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCAGCCACTCCCCACATaGCCTATGTTGAGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPQPLPT*PMLRVR
Trigger: CCGCACCCTCAACATAGGCCATGTGGGGAGTGGCTG...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCCTCTGACTGTCATCTaGCACTTCTGCCCCCAGGGC +
Preference number: 2 (lower is better)
Translates to: KLSCLITSLARLKAVAVPPLTVI*HFCPQG
Trigger: GCCCTGGGGGCAGAAGTGCCAGATGACAGTCAGAGG...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGCCATTGAGAGCAGCTaGAGATGGAGTGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAAAIESS*RWSGSW
Trigger: CCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGC...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAATCTCTGCCTGTGGATaGAAAGACCCTCAATCAGCT +
Preference number: 2 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKISACG*KDPQSA
Trigger: AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGAT...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR CCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACGGGAGGGAGTTGGCCTaGGACCTTGCCCCCAACTAC +
Preference number: 2 (lower is better)
Translates to: THLEAIESSWRWSGSWSYGRELA*DLAPNY
Trigger: GTAGTTGGGGGCAAGGTCCCAGGCCAACTCCCTCCC...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR TCA 90 bp ATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGACTGTCCACACCGTGGTaGGGGACAGAGGCACGAGGC +
Preference number: 2 (lower is better)
Translates to: IVSLQCPQACQLGVQIPRLSTPW*GTEARG
Trigger: GCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAG...TCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR TCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCACATGGCCTATGTTaGGGGTGCGGCACTGTCCAC +
Preference number: 2 (lower is better)
Translates to: EKLSCLITSLARLKAVAVPHGLC*GCGTVH
Trigger: GTGGACAGTGCCGCACCCTCAACATAGGCCATGTGG...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTACACCTGGAAGCCATTaGGAGCAGCTGGAGATGGAG +
Preference number: 2 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAATPGSH*EQLEME
Trigger: CTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGT...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAAGGCAGAAAGTGAGCTaGCTGTTTCATGCTATTAGG +
Preference number: 2 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKRQKVS*LFHAIR
Trigger: CCTAATAGCATGAAACAGTCAGCTCACTTTCTGCCT...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR GCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAGCAGAAGAGAAGGGCTaGCCTTGGGAACATGGACTC +
Preference number: 2 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRAEEKG*PWEHGL
Trigger: GAGTCCATGTTCCCAAGGGCAGCCCTTCTCTTCTGC...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR GCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGCAGAAGAGAAGGGCTaGCCTTGGGAACATGGACTC +
Preference number: 2 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRAEEKG*PWEHGL
Trigger: GAGTCCATGTTCCCAAGGGCAGCCCTTCTCTTCTGC...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR GCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCTCTGCCCCCAGGGCCTaGTTCAGCTCTGAGAGGTTC +
Preference number: 2 (lower is better)
Translates to: EKLSCLITSLARLKAVAVSAPRA*FSSERF
Trigger: GAACCTCTCAGAGCTGAAGCAGGCCCTGGGGGCAGA...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR GCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCTCTGCCGTCTTTGCTaGGGAGCACAACAGGCCCCT +
Preference number: 2 (lower is better)
Translates to: EKLSCLITSLARLKAVAVLCRLC*GAQQAP
Trigger: AGGGGCCTGTTGTGCTCCGCAGCAAAGACGGCAGAG...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR CCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGCCTGTCGACTGTCCCTaGCAGTTTCCTGAACGGAGG +
Preference number: 2 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGPVDCP*QFPERR
Trigger: CCTCCGTTCAGGAAACTGCCAGGGACAGTCGACAGG...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACATCCCTGGCAGTTTCCTaGACGGAGGGAGGGAGTTGG +
Preference number: 2 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATSLAVS*TEGGSW
Trigger: CCAACTCCCTCCCTCCGTTCAGGAAACTGCCAGGGA...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACAAGCAGGCAGTTGTCCTaGCAAGAGGGCGGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: PTTSLELNSRREGLPLGTSRQLS*QEGGPC
Trigger: ACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCT...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCACATGGCCTATGTTaGGGGTGCGGCACTGTCCAC +
Preference number: 2 (lower is better)
Translates to: REAELFNHLLGQTQGGGCPHGLC*GCGTVH
Trigger: GTGGACAGTGCCGCACCCTCAACATAGGCCATGTGG...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309996.6
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR GCA 90 bp GCCGCATATGCAGATGCTGCTCGGGGTCTTCAGTCTCACCTCTCCGTTGACAATAAGGCAGAAGGCGAGTaGCCTCGCATGGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: AAYADAARGLQSHLSVDNKAEGE*PRMAGE
Trigger: TTCTCCTGCCATGCGAGGGCACTCGCCTTCTGCCTT...ATTGTCAACGGAGAGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR GCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCCACGAGCTCATCTCTaGCTGTGGATGGAAAGACCC +
Preference number: 2 (lower is better)
Translates to: KLSCLITSLARLKAVAVPPRAHL*LWMERP
Trigger: GGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGG...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR GCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCGTTCTCTGCCGTCTTTaGTGCGGAGCACAACAGGCC +
Preference number: 2 (lower is better)
Translates to: EKLSCLITSLARLKAVAVVLCRL*CGAQQA
Trigger: GGCCTGTTGTGCTCCGCAGCAAAGACGGCAGAGAAC...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR CCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACAGATGGAGTGGCAGCTaGAGTTACAGGGTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: THLEAIESSWRWSGSWSYRWSGS*SYRVGV
Trigger: CACCCCCACCCTGTAACTCCAGCTGCCACTCCATCT...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCAGCTGGAGATGGAGTaGCAGCTGGAGTTACAGGGT +
Preference number: 2 (lower is better)
Translates to: KLSCLITSLARLKAVAVPQLEME*QLELQG
Trigger: ACCCTGTAACTCCAGCTGCCACTCCATCTCCAGCTG...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACCCAGACTCAAGGCGGTaGCTGTCCCCGAACAACACA +
Preference number: 2 (lower is better)
Translates to: THLEAIESSWRWSGSWSYPDSRR*LSPNNT
Trigger: TGTGTTGTTCGGGGACAGCCACCGCCTTGAGTCTGG...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CCA 90 bp GCCGCATATGCAGATGCTGCTCGGGGTCTTCAGTCTCACCTCTCCGTTGACAATATCCTGCAGGCTCTCTaGTCTACCGGTTTGGAGCCC +
Preference number: 2 (lower is better)
Translates to: AAYADAARGLQSHLSVDNILQAL*STGLEP
Trigger: GGGCTCCAAACCGGTAGACCAGAGAGCCTGCAGGAT...ATTGTCAACGGAGAGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CAA 90 bp TCCCTGTCGACTGTCCCTGGCAGTTTCCTGAACGGAGGGAGGGAGTaGGCCTGGGACCTTGCCCCCAACTACTTGTTCTTCTTAAAGAAG +
Preference number: 2 (lower is better)
Translates to: SLSTVPGSFLNGGRE*AWDLAPNYLFFLKK
Trigger: CTTCTTTAAGAAGAACAAGTAGTTGGGGGCAAGGTCCCAGGCCAACTCCCTCCCTCCGTTCAGGAAACTGCCAGGGACAGTCGACAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR GCA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTAAGGCAGAAGGCGAGTaGCCTCGCATGGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: REAELFNHLLGQTQGGGCKAEGE*PRMAGE
Trigger: TTCTCCTGCCATGCGAGGGCACTCGCCTTCTGCCTT...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309996.6
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACACCTGTCGACTGTCCCTaGCAGTTTCCTGAACGGAGG +
Preference number: 2 (lower is better)
Translates to: PTTSLELNSRREGLPLGTPVDCP*QFPERR
Trigger: CCTCCGTTCAGGAAACTGCCAGGGACAGTCGACAGG...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR TCA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACGGGCTCCTGCGCCTCTaGCTGTCATCTGGCACTTCT +
Preference number: 2 (lower is better)
Translates to: VDNACPYCRTASIGCPIYGLLRL*LSSGTS
Trigger: AGAAGTGCCAGATGACAGTCAGAGGCGCAGGAGCCC...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR TCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGGAGGAGGCAGAAAGTaGGCTGACTGTTTCATGCTA +
Preference number: 2 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGGGGRK*ADCFML
Trigger: TAGCATGAAACAGTCAGCTCACTTTCTGCCTCCTCC...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR CCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCAAGACGCTGTGGCAATaGCTGCATTCACCACCCGTA +
Preference number: 2 (lower is better)
Translates to: EKLSCLITSLARLKAVAVKTLWQ*LHSPPV
Trigger: TACGGGTGGTGAATGCAGCCATTGCCACAGCGTCTT...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR TCA 90 bp TCCCCTCTTCTATGTCCTGTTCTTAAGGAATCATGCCCTGAAGTCCTGCTGCCGGACACCCAGAGGCGGTaGGAGAAGCTGAGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: SPLLCPVLKESCPEVLLPDTQRR*EKLSCL
Trigger: TAAACAGCTCAGCTTCTCTCACCGCCTCTGGGTGTC...CGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGACATAGAAGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR TCA 90 bp ATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGAACTCGGTCTTCGTCATaGCTGATGATAGGCCCGCAG +
Preference number: 2 (lower is better)
Translates to: IVSLQCPQACQLGVQIPRTRSSS*LMIGPQ
Trigger: CTGCGGGCCTATCATCAGTCATGACGAAGACCGAGT...TCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR CCA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATAGATGGCATGTGCCTGTaGTTCAGGCTACTCGGGAGG +
Preference number: 2 (lower is better)
Translates to: PIIVSLQCPQACQLGVQIDGMCL*FRLLGR
Trigger: CCTCCCGAGTAGCCTGAACCACAGGCACATGCCATC...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR CCA 90 bp GCCGCATATGCAGATGCTGCTCGGGGTCTTCAGTCTCACCTCTCCGTTGACAATATGGGGCTGCCTTCCTaGAAAAACGGTTGTCTGTGT +
Preference number: 2 (lower is better)
Translates to: AAYADAARGLQSHLSVDNMGLPS*KNGCLC
Trigger: ACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCAT...ATTGTCAACGGAGAGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CAA 90 bp CTGAACGGAGGGAGGGAGTTGGCCTGGGACCTTGCCCCCAACTACTaGTTCTTCTTAAAGAAGCTGAAGCGTTTTTCTCGCTCTCGTTCT +
Preference number: 2 (lower is better)
Translates to: LNGGRELAWDLAPNY*FFLKKLKRFSRSRS
Trigger: AGAACGAGAGCGAGAAAAACGCTTCAGCTTCTTTAAGAAGAACAAGTAGTTGGGGGCAAGGTCCCAGGCCAACTCCCTCCCTCCGTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR TCA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATAGAGGCTGGGGAAACGTaGGATGAAGGAGACCAGAAC +
Preference number: 2 (lower is better)
Translates to: PIIVSLQCPQACQLGVQIEAGET*DEGDQN
Trigger: GTTCTGGTCTCCTTCATCTCACGTTTCCCCAGCCTC...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR GCA 90 bp TCCCCTCTTCTATGTCCTGTTCTTAAGGAATCATGCCCTGAAGTCCTGCTGCCGAGGGGGAAATTATCCTaGAGGCTCTCTGGTCTACCG +
Preference number: 2 (lower is better)
Translates to: SPLLCPVLKESCPEVLLPRGKLS*RLSGLP
Trigger: CGGTAGACCAGAGAGCCTGCAGGATAATTTCCCCCT...CGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGACATAGAAGAGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR CCA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACAGGTGGAGGTTGCAATaGGCTGTGATTGCGCCACTG +
Preference number: 2 (lower is better)
Translates to: VDNACPYCRTASIGCPIYRWRLQ*AVIAPL
Trigger: CAGTGGCGCAATCACAGCCCATTGCAACCTCCACCT...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CAA 90 bp TCCTCTTCCATGCTTCATACCTGGTGTTTCAGAGTCATGACACACTaGGTTTGGCTACATCTCAGTAGCCACACATGGCTGGGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: SSSMLHTWCFRVMTH*VWLHLSSHTWLGGC
Trigger: GCAGCCACCCAGCCATGTGTGGCTACTGAGATGTAGCCAAACCAAGTGTGTCATGACTCTGAAACACCAGGTATGAAGCATGGAAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR TCA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTGGCTGGTCTGAGGGGTaGGGAACCAGAAGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVGWSEG*GTRRQK
Trigger: CTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCC...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR CCA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTCCTGTCGACTGTCCCTaGCAGTTTCCTGAACGGAGG +
Preference number: 2 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVPVDCP*QFPERR
Trigger: CCTCCGTTCAGGAAACTGCCAGGGACAGTCGACAGG...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR CCA 90 bp ATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGATGTAAAGTCACCTCATaGCTTCCCAGAGTGACTTCA +
Preference number: 2 (lower is better)
Translates to: IVSLQCPQACQLGVQIPRCKVTS*LPRVTS
Trigger: TGAAGTCACTCTGGGAAGCCATGAGGTGACTTTACA...TCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR TCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGAAGACTTAGTCGGGTATaGTGGCATGTGCCTGTGGTT +
Preference number: 2 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGRLSRV*WHVPVV
Trigger: AACCACAGGCACATGCCATCATACCCGACTAAGTCT...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR TCA 90 bp TCCCCTCTTCTATGTCCTGTTCTTAAGGAATCATGCCCTGAAGTCCTGCTGCCGTTCCACTTAGTCCCATaGCAGATTGTTCTAGTTACG +
Preference number: 2 (lower is better)
Translates to: SPLLCPVLKESCPEVLLPFHLVP*QIVLVT
Trigger: CGTAACTAGAACAATCTGTCATGGGACTAAGTGGAA...CGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGACATAGAAGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR CCA 90 bp GTGAAGAAAATTGTGCACCAGGGAAGGAGTCCCTCATTGCTTTTTAACATGAATAGATGGAGTGGCAGCTaGAGTTACAGGGTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: VKKIVHQGRSPSLLFNMNRWSGS*SYRVGV
Trigger: CACCCCCACCCTGTAACTCCAGCTGCCACTCCATCT...ATTCATGTTAAAAAGCAATGAGGGACTCCTTCCCTGGTGCACAATTTTCTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR GCA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTGGGTATGATGGCATGTaGCTGTGGTTCAGGCTACTC +
Preference number: 2 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVGYDGM*LWFRLL
Trigger: GAGTAGCCTGAACCACAGGCACATGCCATCATACCC...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR CCA 90 bp TCCCCTCTTCTATGTCCTGTTCTTAAGGAATCATGCCCTGAAGTCCTGCTGCCGGTATATTTACATGCTTaGGCTGTAAAGTCACCTCAT +
Preference number: 2 (lower is better)
Translates to: SPLLCPVLKESCPEVLLPVYLHA*AVKSPH
Trigger: ATGAGGTGACTTTACAGCCCAAGCATGTAAATATAC...CGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGACATAGAAGAGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CAA 90 bp ACCTCTCCGTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATaGGCTGTCCTATTTACACTTACGTGTCGTGTTAAAATAATCATT +
Preference number: 2 (lower is better)
Translates to: TSPLTMPAPTAGLLQ*AVLFTLTCRVKIII
Trigger: AATGATTATTTTAACACGACACGTAAGTGTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAACGGAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 72 bp GGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTaGTGGGCACCACCGGCTCTTCAGGCTCTCCAGAGG +
Preference number: 3 (lower is better)
Translates to: GAWSWPGSCPGW*WAPPALQALQR
Trigger: CCTCTGGAGAGCCTGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR CCA 72 bp CTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTaGTGCTGGGCACCACCGGCTCTTCAGGCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: LGAWSWPGSCPG*CWAPPALQALQ
Trigger: CTGGAGAGCCTGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR CCA 72 bp GCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTaGGCACCACCGGCTCTTCAGGCTCTCCAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: AWSWPGSCPGWC*APPALQALQRQ
Trigger: CTGCCTCTGGAGAGCCTGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR CAA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAACGGAGGGAGGGAGTaGGCCTGGGACCTTGCCCCC +
Preference number: 3 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQNGGRE*AWDLAP
Trigger: GGGGGCAAGGTCCCAGGCCAACTCCCTCCCTCCGTT...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CAA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACACTGTGCTGAGTaGGCCGCAGTGGACAGCAGG +
Preference number: 3 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGEGHCAE*AAVDSR
Trigger: CCTGCTGTCCACTGCGGCCAACTCAGCACAGTGTCC...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR-3UTR CAA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAACGGAGGGAGGGAGTaGGCCTGGGACCTTGCCCCC +
Preference number: 3 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRNGGRE*AWDLAP
Trigger: GGGGGCAAGGTCCCAGGCCAACTCCCTCCCTCCGTT...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR CCA 72 bp TGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTaGCAGTTTCCTGAACGGAGGGAGGGAGTTGGCCTG +
Preference number: 3 (lower is better)
Translates to: CPDKRAVPVDCP*QFPERREGVGL
Trigger: CAGGCCAACTCCCTCCCTCCGTTCAGGAAACTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR TCA 72 bp ACCTTGGCAACAGACCCTAGCAGCAGGCAGTTGTCCTaGCAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCA +
Preference number: 3 (lower is better)
Translates to: TLATDPSSRQLS*QEGGPCRLSLA
Trigger: TGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGCTAGGGTCTGTTGCCAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CAA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACAAACGGAGGGAGGGAGTaGGCCTGGGACCTTGCCCCC +
Preference number: 3 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATNGGRE*AWDLAP
Trigger: GGGGGCAAGGTCCCAGGCCAACTCCCTCCCTCCGTT...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CAA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTAACGGAGGGAGGGAGTaGGCCTGGGACCTTGCCCCC +
Preference number: 3 (lower is better)
Translates to: REAELFNHLLGQTQGGGCNGGRE*AWDLAP
Trigger: GGGGGCAAGGTCCCAGGCCAACTCCCTCCCTCCGTT...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309996.6
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CAA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGACCCACATGGCCTATGTaGAGGGTGCGGCACTGTCCA +
Preference number: 3 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRPTWPM*RVRHCP
Trigger: TGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR CCA 72 bp TGCAGGCTCTCTGGTCTACCGGTTTGGAGCCCACTCTaGGGCTGTGATGTGCTAGTTCTGGGCCTGCACACA +
Preference number: 3 (lower is better)
Translates to: CRLSGLPVWSPL*GCDVLVLGLHT
Trigger: TGTGTGCAGGCCCAGAACTAGCACATCACAGCCCCAGAGTGGGCTCCAAACCGGTAGACCAGAGAGCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR CAA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCACATGGCCTATGTaGAGGGTGCGGCACTGTCCA +
Preference number: 3 (lower is better)
Translates to: REAELFNHLLGQTQGGGCPTWPM*RVRHCP
Trigger: TGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309996.6
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CAA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCGGTGATGGGTTGACCTaGGCAACAGACCCTAGCAGC +
Preference number: 3 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAAGDGLT*ATDPSS
Trigger: GCTGCTAGGGTCTGTTGCCAAGGTCAACCCATCACC...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR-3UTR CAA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATAGGAGAGGACACAGGCTaGGGCAGAGAGGCTGTGGTC +
Preference number: 3 (lower is better)
Translates to: PIIVSLQCPQACQLGVQIGEDTG*GREAVV
Trigger: GACCACAGCCTCTCTGCCCAAGCCTGTGTCCTCTCC...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 72 bp GAGGGAAATGAGACCAGGTCAGGGAAGCTCTCAGTGTaGCACGGCTCTTCAAGAGCTTGGAGGCTGGGGAAA +
Preference number: 3 (lower is better)
Translates to: EGNETRSGKLSV*HGSSRAWRLGK
Trigger: TTTCCCCAGCCTCCAAGCTCTTGAAGAGCCGTGTCACACTGAGAGCTTCCCTGACCTGGTCTCATTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 72 bp AGATGCTGCTCGGGGTCTTCAGTCTCACCTCTCCGTTaGCAATGCCTGCCCCTACTGCAGGACTGCTTCAAT +
Preference number: 3 (lower is better)
Translates to: RCCSGSSVSPLR*QCLPLLQDCFN
Trigger: ATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAACGGAGAGGTGAGACTGAAGACCCCGAGCAGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CCA 72 bp ACCACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATaGAAAGACCCTCAATCAGCTTCAAGGACACTGTGC +
Preference number: 3 (lower is better)
Translates to: TTRSHELISACG*KDPQSASRTLC
Trigger: GCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
3UTR CCA 72 bp ACACACTTGGTTTGGCTACATCTCAGTAGCCACACATaGCTGGGTGGCTGCTGCTGTGGACAGCATGGACCT +
Preference number: 3 (lower is better)
Translates to: THLVWLHLSSHT*LGGCCCGQHGP
Trigger: AGGTCCATGCTGTCCACAGCAGCAGCCACCCAGCCATGTGTGGCTACTGAGATGTAGCCAAACCAAGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR CAA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACTGTTTAATCACCTCCTaGGCCAGACTCAAGGCGGTG +
Preference number: 3 (lower is better)
Translates to: THLEAIESSWRWSGSWSYCLITS*ARLKAV
Trigger: CACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACA...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
3UTR GCA 72 bp TTAAGGAATCATGCCCTGAAGTCCTGCTGCCGCATATaGAGATGCTGCTCGGGGTCTTCAGTCTCACCTCTC +
Preference number: 3 (lower is better)
Translates to: LRNHALKSCCRI*RCCSGSSVSPL
Trigger: GAGAGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCGGCAGCAGGACTTCAGGGCATGATTCCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 72 bp GTCCTGTTCTTAAGGAATCATGCCCTGAAGTCCTGCTaGCGCATATGCAGATGCTGCTCGGGGTCTTCAGTC +
Preference number: 3 (lower is better)
Translates to: VLFLRNHALKSC*RICRCCSGSSV
Trigger: GACTGAAGACCCCGAGCAGCATCTGCATATGCGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 72 bp CTACATCTCAGTAGCCACACATGGCTGGGTGGCTGCTaGTGTGGACAGCATGGACCTAAAGTCCACTCTTGT +
Preference number: 3 (lower is better)
Translates to: LHLSSHTWLGGC*CGQHGPKVHSC
Trigger: ACAAGAGTGGACTTTAGGTCCATGCTGTCCACAGCAGCAGCCACCCAGCCATGTGTGGCTACTGAGATGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 72 bp AGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTaGGGTCCCTTGATCTACTGGAGAGCAGACGGCAAG +
Preference number: 3 (lower is better)
Translates to: SLLEPATSQIPV*GPLIYWRADGK
Trigger: CTTGCCGTCTGCTCTCCAGTAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 72 bp CAGTCTCACCTCTCCGTTGACAATGCCTGCCCCTACTaGAGGACTGCTTCAATTGGCTGTCCTATTTACACT +
Preference number: 3 (lower is better)
Translates to: QSHLSVDNACPY*RTASIGCPIYT
Trigger: AGTGTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAACGGAGAGGTGAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 72 bp TATGTCCTGTTCTTAAGGAATCATGCCCTGAAGTCCTaGTGCCGCATATGCAGATGCTGCTCGGGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: YVLFLRNHALKS*CRICRCCSGSS
Trigger: TGAAGACCCCGAGCAGCATCTGCATATGCGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 72 bp GCTTCCCCTCTTCTATGTCCTGTTCTTAAGGAATCATaGCCTGAAGTCCTGCTGCCGCATATGCAGATGCTG +
Preference number: 3 (lower is better)
Translates to: ASPLLCPVLKES*PEVLLPHMQML
Trigger: CAGCATCTGCATATGCGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGACATAGAAGAGGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CCA 72 bp CATACCTGGTGTTTCAGAGTCATGACACACTTGGTTTaGCTACATCTCAGTAGCCACACATGGCTGGGTGGC +
Preference number: 3 (lower is better)
Translates to: HTWCFRVMTHLV*LHLSSHTWLGG
Trigger: GCCACCCAGCCATGTGTGGCTACTGAGATGTAGCCAAACCAAGTGTGTCATGACTCTGAAACACCAGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 72 bp TTCTGGGCCTGCACACACCTAACTCGGTCTTCGTCATaGCTGATGATAGGCCCGCAGTCAATGACTAAAGAT +
Preference number: 3 (lower is better)
Translates to: FWACTHLTRSSS*LMIGPQSMTKD
Trigger: ATCTTTAGTCATTGACTGCGGGCCTATCATCAGTCATGACGAAGACCGAGTTAGGTGTGTGCAGGCCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 72 bp GTGCCCACTTCCATCAACATCTGGAGACAAACACTGTaGCCTGAAAGCTCCGATTGCCAAACCAGAGACAAA +
Preference number: 3 (lower is better)
Translates to: VPTSINIWRQTL*PESSDCQTRDK
Trigger: TTTGTCTCTGGTTTGGCAATCGGAGCTTTCAGGGCACAGTGTTTGTCTCCAGATGTTGATGGAAGTGGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 72 bp AAGAACACGCTTTTCCTGTTGGAGGCCACCAAGGAGTaGCCACTTCCATCAACATCTGGAGACAAACACTGT +
Preference number: 3 (lower is better)
Translates to: KNTLFLLEATKE*PLPSTSGDKHC
Trigger: ACAGTGTTTGTCTCCAGATGTTGATGGAAGTGGGCACTCCTTGGTGGCCTCCAACAGGAAAAGCGTGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 72 bp ACAGTAAATCTACCCATCTTAAGGGGGAAATTATCCTaGAGGCTCTCTGGTCTACCGGTTTGGAGCCCACTC +
Preference number: 3 (lower is better)
Translates to: TVNLPILRGKLS*RLSGLPVWSPL
Trigger: GAGTGGGCTCCAAACCGGTAGACCAGAGAGCCTGCAGGATAATTTCCCCCTTAAGATGGGTAGATTTACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CCA 72 bp TTAAAAAGAGGCTTGGCATTGGTCAACCCAGCACACTaGAGGTCACTGTCAGAGGGAAATGAGACCAGGTCA +
Preference number: 3 (lower is better)
Translates to: LKRGLALVNPAH*RSLSEGNETRS
Trigger: TGACCTGGTCTCATTTCCCTCTGACAGTGACCTCCAGTGTGCTGGGTTGACCAATGCCAAGCCTCTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 72 bp CACTTCCATCAACATCTGGAGACAAACACTGTGCCCTaGAAGCTCCGATTGCCAAACCAGAGACAAAGGAGA +
Preference number: 3 (lower is better)
Translates to: HFHQHLETNTVP*KLRLPNQRQRR
Trigger: TCTCCTTTGTCTCTGGTTTGGCAATCGGAGCTTTCAGGGCACAGTGTTTGTCTCCAGATGTTGATGGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR GCA 72 bp TTTCCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTaGCAGCTTGGAGTGCAAATACCTAGATTCCCTGAG +
Preference number: 3 (lower is better)
Translates to: FPIIVSLQCPQA*QLGVQIPRFPE
Trigger: CTCAGGGAATCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 72 bp GTCACCTCATGGCTTCCCAGAGTGACTTCATTCTGTTaGTCAGTTTATTGGAACCTGCCACTTCTCAGATCC +
Preference number: 3 (lower is better)
Translates to: VTSWLPRVTSFC*SVYWNLPLLRS
Trigger: GGATCTGAGAAGTGGCAGGTTCCAATAAACTGATCAACAGAATGAAGTCACTCTGGGAAGCCATGAGGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 72 bp CCTCTTCCATGCTTCATACCTGGTGTTTCAGAGTCATaGCACACTTGGTTTGGCTACATCTCAGTAGCCACA +
Preference number: 3 (lower is better)
Translates to: PLPCFIPGVSES*HTWFGYISVAT
Trigger: TGTGGCTACTGAGATGTAGCCAAACCAAGTGTGTCATGACTCTGAAACACCAGGTATGAAGCATGGAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR-3UTR CAA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGACATGAATACTGCTTGTaGACATCATCCCAACCCATG +
Preference number: 3 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGHEYCL*TSSQPM
Trigger: CATGGGTTGGGATGATGTCAACAAGCAGTATTCATG...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 72 bp TGCACCAGGGAAGGAGTCCCTCATTGCTTTTTAACATaGATACTGCTTGTTGACATCATCCCAACCCATGGT +
Preference number: 3 (lower is better)
Translates to: CTREGVPHCFLT*ILLVDIIPTHG
Trigger: ACCATGGGTTGGGATGATGTCAACAAGCAGTATTCATGTTAAAAAGCAATGAGGGACTCCTTCCCTGGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR TCA 72 bp TGCAAATACCTAGATTCCCTGAGCACCCCCAAGGTATaGCTGTCTCTTCAGTGGAGATTTTACAGTTGTATT +
Preference number: 3 (lower is better)
Translates to: CKYLDSLSTPKV*LSLQWRFYSCI
Trigger: AATACAACTGTAAAATCTCCACTGAAGAGACAGTCATACCTTGGGGGTGCTCAGGGAATCTAGGTATTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CCA 72 bp TATTTAAAGTTGTTGTCCTCTTCCATGCTTCATACCTaGTGTTTCAGAGTCATGACACACTTGGTTTGGCTA +
Preference number: 3 (lower is better)
Translates to: YLKLLSSSMLHT*CFRVMTHLVWL
Trigger: TAGCCAAACCAAGTGTGTCATGACTCTGAAACACCAGGTATGAAGCATGGAAGAGGACAACAACTTTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCCTGCGCAAGAAGTCCTaGAGCCGCCGCGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTLRKKS*SRRASP
Trigger: GGGGGAGGCGCGGCGGCTGCAGGACTTCTTGCGCAG...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGGCGTTGATGGCCACTaGCTGAGCGGGATGGCCGGC +
Preference number: 4 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTGVDGH*LSGMAG
Trigger: GCCGGCCATCCCGCTCAGGCAGTGGCCATCAACGCC...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGCTTGGCGTGCCCCGTaGAGGAAGCGCTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTAWRAP*RKRCSS
Trigger: CGAGCTGCAGCGCTTCCTGCACGGGGCACGCCAAGC...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCTCCCGCAGGAATCCCTaGAAGCCGTGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTSRRNP*KPWAWA
Trigger: GGCCCAGGCCCACGGCTTCCAGGGATTCCTGCGGGA...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGTGGGCACCCGGCTCTaGACCTCGGGCGTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKVGTRL*TSGVRL
Trigger: GAGCCGCACGCCCGAGGTGCAGAGCCGGGTGCCCAC...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGCCTCCAGGAGCCCGTaGATCCGTTCCCCATTGGCG +
Preference number: 4 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTASRSP*IRSPLA
Trigger: CGCCAATGGGGAACGGATCCACGGGCTCCTGGAGGC...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGCGGCAGAGCTTCCCTaGAGCTGGGCCCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKAAELP*SWAQAS
Trigger: CGAGGCCTGGGCCCAGCTTCAGGGAAGCTCTGCCGC...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGGTGGCAGCATGGGCTaGCTCGGTAGACCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTGGSMG*LGRPAL
Trigger: CAGAGCAGGTCTACCGAGTCAGCCCATGCTGCCACC...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp ATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGGCTCTTCAGCCAGCTCACGCTCGTaGTCCGCCTTCTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: MVMARVMPRVVLGTTGSSASSRS*SAFSSR
Trigger: GCGGCTGGAGAAGGCGGAGCACGAGCGTGAGCTGGC...TGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGGCGCTCTGCCTCCATaGCATGGTCCAGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTGALPP*HGPAPC
Trigger: GCAAGGTGCTGGACCATGCCATGGAGGCAGAGCGCC...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGTGACACTGGGGGCATaGTCATGGCCCGGGTCATGC +
Preference number: 4 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTVTLGA*SWPGSC
Trigger: GCATGACCCGGGCCATGACCATGCCCCCAGTGTCAC...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAATGCCTGCCCAGGTCCTaGGACTGCAGCCGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGECLPRS*DCSRPF
Trigger: GAAGGGCCGGCTGCAGTCTCAGGACCTGGGCAGGCA...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAACTCTCAGCCGGGCGTTaGTGGCCACTGCCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGELSAGR*WPLPER
Trigger: CCGCTCAGGCAGTGGCCATCAACGCCCGGCTGAGAG...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCGGGCCTCGGCAGCGTTaGGGTCGCGGCCAGTCCCGT +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPGPRQR*GRGQSR
Trigger: ACGGGACTGGCCGCGACCTCAACGCTGCCGAGGCCC...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGGAGCCTCAGCAGGTTaGGTCCGTCCCGGAGGTCGC +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKGASAG*VRPGGR
Trigger: GCGACCTCCGGGACGGACGCAACCTGCTGAGGCTCC...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCCTCCTGCTAGGTGCCTaGCCAGGTCCTGAGACTGCA +
Preference number: 4 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTLLLGA*PGPETA
Trigger: TGCAGTCTCAGGACCTGGGCAGGCACCTAGCAGGAG...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGGAGGCCAGGAGGTGCTaGTGCTCCCGCACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQEARRC*CSRTQA
Trigger: GGCCTGGGTGCGGGAGCAGCAGCACCTCCTGGCCTC...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCAGGGTCTCGAACCTCTaGTGCACGACCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTRVSNL*CTTSRS
Trigger: GGACCTGGAGGTCGTGCAGCAGAGGTTCGAGACCCT...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAATCCTCCCAGCCGGTCTaGACCTCTCTCAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKSSQPV*TSLSRA
Trigger: CGCCCGGCTGAGAGAGGTGCAGACCGGCTGGGAGGA...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGCGGTGGCCGTCGTCCTaGACCTGCTGGACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQRWPSS*TCWTWG
Trigger: CCCCCAGGTCCAGCAGGTGCAGGACGACGGCCACCG...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAGGGAGTGCGGCCTGGTaGGGCCGTCGCACACATCCA +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGEGSAAW*GRRTHP
Trigger: TGGATGTGTGCGACGGCCGCACCAGGCCGCACTCCC...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGCCACGGCCTGCATGTaGCGGCCGATCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKATACM*RPISSA
Trigger: GGCTGAGGAGATCGGCCGCCACATGCAGGCCGTGGC...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAGAGCGGCGATGCGCTTaGTGTCGTGGTAGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGEERRCA*CRGSAR
Trigger: CCGAGCGCTACCACGACATCAAGCGCATCGCCGCTC...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGCAGGGCCAGCCCGTTaGGCCACTGCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKAGPAR*ATAPSP
Trigger: AGGAGAAGGAGCAGTGGCTCAACGGGCTGGCCCTGC...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGGAGGCCACAGCAGTCTaGGTGCGGCCTAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQEATAV*VRPSQA
Trigger: GGCCTGGCTAGGCCGCACTCAGACTGCTGTGGCCTC...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAGCTGGCACAAGGCCCTaGACTTCTCCTCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGEAGTRP*TSPPRP
Trigger: GGGCCGTGGAGGAGAAGTTCAGGGCCTTGTGCCAGC...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp ATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGGCTCTTCACTCCCAGGCCACTGCTaGCTTCTGGAAGGCCTCGTG +
Preference number: 4 (lower is better)
Translates to: MVMARVMPRVVLGTTGSSLPGHC*LLEGLV
Trigger: CACGAGGCCTTCCAGAAGTCAGCAGTGGCCTGGGAG...TGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGGAGGCCAGGAGGTGCTaGTGCTCCCGCACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQEARRC*CSRTQA
Trigger: GGCCTGGGTGCGGGAGCAGCAGCACCTCCTGGCCTC...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGCCCTCGGCCACCAACTaGTGGCCCTGCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQPSATN*WPCSRV
Trigger: CACCCTGGAGCAGGGCCAGCAGTTGGTGGCCGAGGG...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGGCTCTTCATCGCGGTGGAACTGGTaGTGCTCGCGAGAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: MVMARVMPRVVLGTTGSSSRWNW*CSREAC
Trigger: GCAGGCTTCTCGCGAGCAGCACCAGTTCCACCGCGA...TGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGAAGCCGGAGGTGCTCCTaGAGGCGCTCCCGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGSRRCS*RRSRRS
Trigger: AGAGCGGCGGGAGCGCCTGCAGGAGCACCTCCGGCT...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACGCCAGGGCTTGGCGTaGCCCGTGCAGGAAGCGCTG +
Preference number: 4 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGRQGLA*PVQEAL
Trigger: CAGCGCTTCCTGCACGGGGCACGCCAAGCCCTGGCG...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGGCCTCGGCCACGGCCTaGATGTGGCGGCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQASATA*MWRPIS
Trigger: GGAGATCGGCCGCCACATGCAGGCCGTGGCCGAGGC...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGGGCTTAGACAGGGAGTaGGGCCTGGTGCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQGLDRE*GLVRPS
Trigger: CGACGGCCGCACCAGGCCGCACTCCCTGTCTAAGCC...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCGCCCCAGCTCGGGGCTaGACACCAGGCGCAGTGCGT +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPAPARG*TPGAVR
Trigger: ACGCACTGCGCCTGGTGTCCAGCCCCGAGCTGGGGC...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAACGTAGGAAGAGGCACTaGGGGTCAGCCTGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGERRKRH*GSAWSR
Trigger: CCGGGACCAGGCTGACCCCCAGTGCCTCTTCCTACG...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGTGGAAGCCGTGGGCCTaGGCCAGGCGACCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGEWKPWA*ARRPCR
Trigger: CCGGCAAGGTCGCCTGGCCCAGGCCCACGGCTTCCA...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGAGCTCGCGGCGGAGCTaGCACAGCCGGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGESSRRS*HSRRCS
Trigger: GGAGCACCTCCGGCTGTGCCAGCTCCGCCGCGAGCT...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGTGGCCCGTGCAGCATaGCCCCCAGCAATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKVARAA*PPAMSP
Trigger: TGGGCTCATTGCTGGGGGCCATGCTGCACGGGCCAC...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCTCTGCCAGGACCTGTTaGCAGCCTTCTTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTSARTC*QPSSRR
Trigger: CCTTCGGGAAGAAGGCTGCCAACAGGTCCTGGCAGA...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCGGGTCATGCCCCGGGTaGTGCTGGGCACCACCGGCT +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPGSCPG*CWAPPA
Trigger: AGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCC...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGAAGTCGGCGGGGGTaGGAGAGGGGGTTACCTGGG +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGERSRRG*ERGLPG
Trigger: CCCAGGTAACCCCCTCTCCCACCCCCGCCGACTTCT...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCCCCCACCCGGCACGTaGCCCGGGCCAGGTGCGAGT +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPPPPGT*PGPGAS
Trigger: ACTCGCACCTGGCCCGGGTCACGTGCCGGGTGGGGG...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
66% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGTGCCTGCCCAGGTCCTaGGACTGCAGCCGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGECLPRS*DCSRPF
Trigger: GAAGGGCCGGCTGCAGTCTCAGGACCTGGGCAGGCA...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GCTGTGGCAATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTACGCCAGAGCCGCCGTaGTTCCTCCAGCCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: AVAMAAFTTRSHELISACTPEPP*FLQPGP
Trigger: CGGGCCCGGCTGGAGGAATCACGGCGGCTCTGGCGT...ACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCATTGCCACAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCAGGCCCCGGCCTCGCTaGGCATGGTGTAGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPRPRPR*AWCRAP
Trigger: TGGCGCTCTACACCATGCTCAGCGAGGCCGGGGCCT...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGGCCAGCTCACGCTCGTaGTCCGCCTTCTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQASSRS*SAFSSR
Trigger: GCGGCTGGAGAAGGCGGAGCACGAGCGTGAGCTGGC...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGAGCCGTGCCACGTTGTaGTGCCGAGCGGCGATGCGC +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGESRATL*CRAAMR
Trigger: GCGCATCGCCGCTCGGCAGCACAACGTGGCACGGCT...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGGCCTCCACCAGCTCGTaGAGCTGCAGCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQASTSS*SCSRSS
Trigger: GGAGGACCTGCTGCAGCTGCACGAGCTGGTGGAGGC...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCTGTGGCAATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTGGCCCGCCGCGCCGCTaGCAACTCGCACAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: AVAMAAFTTRSHELISACGPPRR*QLAQCL
Trigger: GAGGCACTGTGCGAGTTGGCAGCGGCGCGGCGGGCC...ACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCATTGCCACAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGATCCTCCCAGCCGGTCTaGACCTCTCTCAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGSSQPV*TSLSRA
Trigger: CGCCCGGCTGAGAGAGGTGCAGACCGGCTGGGAGGA...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCCTCTCCCCGCAGGGCTaGATGTTGGGCCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPLSPQG*MLGQEG
Trigger: GCCCTCCTGGCCCAACATGCAGCCCTGCGGGGAGAG...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCTGTCGGCGTGGATGTTaGCTTCAGATACCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTCRRGC*LQIPAG
Trigger: GCCAGCTGGTATCTGAAGGCAACATCCACGCCGACA...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGTGCTCGCGAGAAGCCTaGAGGCGCCGGCAGCGTTCC +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGECSREA*RRRQRS
Trigger: GGAACGCTGCCGGCGCCTGCAGGCTTCTCGCGAGCA...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGGCACAGTGTCGGCGCTaGAGGGCCTCGGCAGCGTTG +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQAQCRR*RASAAL
Trigger: CAACGCTGCCGAGGCCCTGCAGCGCCGACACTGTGC...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGGAGGAGAAGCGGTCTaGCCGGGCCTCTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKGGEAV*PGLYLC
Trigger: GCAGAGATAGAGGCCCGGGCAGACCGCTTCTCCTCC...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAATCATCCGAGTGCAGCTaGGCCTGCAGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKSSECS*ACRLSS
Trigger: GCTGGAGAGCCTGCAGGCCCAGCTGCACTCGGATGA...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGGCTCTTCATGGTCAATCATGTCCTaGCTGCTGGCCGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: MVMARVMPRVVLGTTGSSWSIMS*LLAASW
Trigger: CCAGCTGGCGGCCAGCAGCCAGGACATGATTGACCA...TGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGGTGGCCCGTGCAGCATaGCCCCCAGCAATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQVARAA*PPAMSP
Trigger: TGGGCTCATTGCTGGGGGCCATGCTGCACGGGCCAC...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGAGCCTTCTGGAGCCGGTaGCCGTCGTCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGAFWSR*PSSCTC
Trigger: GCAGGTGCAGGACGACGGCCACCGGCTCCAGAAGGC...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGGAGGCACACTGGCTGTaGGTTCGGGAGCAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQEAHWL*VREQAA
Trigger: AGCCGCCTGCTCCCGAACCCACAGCCAGTGTGCCTC...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGGGATGGTGGTGGCCGTaGCTGGGTTCCGTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQGWWWP*LGSVPG
Trigger: ACCTGGGACGGAACCCAGCCACGGCCACCACCATCC...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGGCTCTTCATTGTGTGGATGGTGGTaGCCGTGGCTGGGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: MVMARVMPRVVLGTTGSSLCGWW*PWLGSV
Trigger: GACGGAACCCAGCCACGGCCACCACCATCCACACAA...TGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAACCCTCCATCTGCTCCTaGGCAGATGGCTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKPSICS*ADGSGP
Trigger: AGGCCCAGAGCCATCTGCCCAGGAGCAGATGGAGGG...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp ACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGACCCTCAATCAGCTCCCCCACCCGGCACGTaGCCCGGGCCAGGTGCGAGT +
Preference number: 4 (lower is better)
Translates to: TRSHELISACGWKDPQSAPPPGT*PGPGAS
Trigger: ACTCGCACCTGGCCCGGGTCACGTGCCGGGTGGGGG...AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGCACTTTCTGCTCCTTaGGGAACTGCAGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTALSAP*GTAVPC
Trigger: ACAAGGCACTGCAGTTCCTCAAGGAGCAGAAAGTGC...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGCGGCAGAGCTTCCCTaGAGCTGGGCCCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRAAELP*SWAQAS
Trigger: CGAGGCCTGGGCCCAGCTTCAGGGAAGCTCTGCCGC...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGTCCCAGCAGGGGCTGTaGGGGCTCTCCATCTGTGCA +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQSQQGL*GLSICA
Trigger: TGCACAGATGGAGAGCCCTCACAGCCCCTGCTGGGA...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGACTCGGCGGCCAGCTCTaGAGCCACGGCGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRLGGQL*SHGVHC
Trigger: GCAGTGGACGCCGTGGCTGCAGAGCTGGCCGCCGAG...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAACTCCTGCTAGGTGCCTaGCCAGGTCCTGAGACTGCA +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKLLLGA*PGPETA
Trigger: TGCAGTCTCAGGACCTGGGCAGGCACCTAGCAGGAG...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCCCCCGCAGGGCTGTGTaGTTGTTGAGCAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPPRRAV*LLSRRR
Trigger: CCTCCGCCTGCTCAACAAGCACACAGCCCTGCGGGG...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGGTGGAGAACTCGTCGTaGCCCAGCTCGGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQVENSS*PSSGLD
Trigger: GTCCAGCCCCGAGCTGGGGCACGACGAGTTCTCCAC...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGACTGCGCAAGAAGTCCTaGAGCCGCCGCGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRLRKKS*SRRASP
Trigger: GGGGGAGGCGCGGCGGCTGCAGGACTTCTTGCGCAG...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCTGGGCCAGGCGACCTTaGCGGCTCTCCCACATTCGG +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPWARRP*RLSHIR
Trigger: CCGAATGTGGGAGAGCCGGCAAGGTCGCCTGGCCCA...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGCGCTGGGCAGGTCCTTaGCATGCTCCATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQRWAGP*HAPWSW
Trigger: CCAGCTCCATGGAGCATGGCAAGGACCTGCCCAGCG...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGATGGCACAGCCGGAGGTaGTCCTGCAGGCGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRWHSRR*SCRRSR
Trigger: GCGGGAGCGCCTGCAGGAGCACCTCCGGCTGTGCCA...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGAAGCTGCTGCTGCTTGTaGTGCACCCGCGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGSCCCL*CTRARA
Trigger: AGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCT...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGAACCCAGCTCAGCGCTaGGCACCAGTGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGENPAQR*APVAPG
Trigger: GCCAGGAGCCACTGGTGCGCAGCGCTGAGCTGGGTT...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAAAGGCCTCCATCTCCTaGTTGCGGCACAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKKASIS*LRHSIP
Trigger: GGGGATGCTGTGCCGCAAGCAGGAGATGGAGGCCTT...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGTGCTCCAGCTTCTCCTaGCGGATGAGCTCGGTGCGC +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQCSSFS*RMSSVR
Trigger: GCGCACCGAGCTCATCCGCCAGGAGAAGCTGGAGCA...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCCGATGTCCGTCTCAATaGCTTCGTGCTTCCGTACTG +
Preference number: 4 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTRCPSQ*LRASVL
Trigger: CAGTACGGAAGCACGAAGCCATTGAGACGGACATCG...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAATGGCTAGAGCCTGCGTaGAGAACTCGTCGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGEWLEPA*RTRRAP
Trigger: TGGGGCACGACGAGTTCTCCACGCAGGCTCTAGCCA...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAATCCAGGGTTGGCCGGTaGCTTCGAATCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKSRVGR*LRISSS
Trigger: GGAGGAGGAGATTCGAAGCCACCGGCCAACCCTGGA...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCCTGCCTCAGGCAGGGTaGCCGGCCCTTCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPLPQAG*PALLQR
Trigger: CCTCTGAAGAAGGGCCGGCCACCCTGCCTGAGGCAG...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACGGCTATACTCGCTCTaGGCCCGCTCCACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGRLYSL*ARSTSP
Trigger: GGGAGAGGTGGAGCGGGCCCAGAGCGAGTATAGCCG...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGAAATCCCTGGAAGCCGTaGGCCTGGGCCAGGCGACCT +
Preference number: 4 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGNPWKP*AWARRP
Trigger: AGGTCGCCTGGCCCAGGCCCACGGCTTCCAGGGATT...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGAATCCCTGGAAGCCGTaGGCCTGGGCCAGGCGACCT +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGENPWKP*AWARRP
Trigger: AGGTCGCCTGGCCCAGGCCCACGGCTTCCAGGGATT...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACCATGGAGCTGGCCATaGGCAGCCGCTCTGTCACCC +
Preference number: 4 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGPWSWP*AAALSP
Trigger: GGGTGACAGAGCGGCTGCCCATGGCCAGCTCCATGG...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCTTCTTCATGAGAAGCTaGACGCTGGGCAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTFFMRS*TLGRSL
Trigger: CAAGGACCTGCCCAGCGTCCAGCTTCTCATGAAGAA...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAATGGTCAATCATGTCCTaGCTGCTGGCCGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKWSIMS*LLAASW
Trigger: CCAGCTGGCGGCCAGCAGCCAGGACATGATTGACCA...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGGCTCTTCACCTGGGCTTGGCGGATaGATATCCGAGTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: MVMARVMPRVVLGTTGSSPGLGG*ISECSL
Trigger: CAGAGAGCACTCGGATATCCATCCGCCAAGCCCAGG...TGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGCGCGCTCCTGACCGATaGTGCTTGTGTCCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQRAPDR*CLCPGR
Trigger: TCTCCCGGGACACAAGCACCATCGGTCAGGAGCGCG...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGGCTCTTCACCGCGCTGGCTGCCTTaGCATCCTTGTAAAAGCCGA +
Preference number: 4 (lower is better)
Translates to: MVMARVMPRVVLGTTGSSPRWLP*HPCKSR
Trigger: TCGGCTTTTACAAGGATGCCAAGGCAGCCAGCGCGG...TGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACAGCAGGGCAGAGGCGCTaGCGGCCCGCACCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTAGQRR*RPAPSR
Trigger: CCGAGAGGGTGCGGGCCGTCAGCGCCTCTGCCCTGC...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GCCGCATATGCAGATGCTGCTCGGGGTCTTCAGTCTCACCTCTCCGTTGACAATACGCCAGAGCCGCCGTaGTTCCTCCAGCCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: AAYADAARGLQSHLSVDNTPEPP*FLQPGP
Trigger: CGGGCCCGGCTGGAGGAATCACGGCGGCTCTGGCGT...ATTGTCAACGGAGAGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAGGGCTGTGTGCTTGTTaGGCAGGCGGAGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRGLCAC*AGGGHR
Trigger: CCGGTGCCCTCCGCCTGCTCAACAAGCACACAGCCC...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTTTGATGGCCACTGCCTaGGCGGGATGGCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAALMATA*AGWPAA
Trigger: GGCTGCCGGCCATCCCGCTCAGGCAGTGGCCATCAA...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCGCCGCATGGTGGCCCTaGGGTCCTCCCAGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPAAWWP*GPPSRS
Trigger: AGACCGGCTGGGAGGACCTCAGGGCCACCATGCGGC...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCCATGGCCCCCAGCAATaGGCCCATTGGCCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPHGPQQ*AHWPAH
Trigger: ATGCGCTGGCCAATGGGCTCATTGCTGGGGGCCATG...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACATGGCCCCCAGCAATaGGCCCATTGGCCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGHGPQQ*AHWPAH
Trigger: ATGCGCTGGCCAATGGGCTCATTGCTGGGGGCCATG...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGCTCCCAGGCCACTGCTaGCTTCTGGAAGGCCTCGTG +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQLPGHC*LLEGLV
Trigger: CACGAGGCCTTCCAGAAGTCAGCAGTGGCCTGGGAG...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGGAGGAGGCAGAAAGTaGGCTGACTGTTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTGGGRK*ADCFML
Trigger: TAGCATGAAACAGTCAGCTCACTTTCTGCCTCCTCC...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp ATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGGCTCTTCAACACCTGGAAGCCATTaGGAGCAGCTGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: MVMARVMPRVVLGTTGSSTPGSH*EQLEME
Trigger: CTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGT...TGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGAGGCGGGCCGAGCTaGTGTCATTGTCCCAGTCCG +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQRGGPS*CHCPSP
Trigger: CGGACTGGGACAATGACAGCAGCTCGGCCCGCCTCT...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGGCTCTTCAAGGGTCACGATCGTTTaGTCGATCCACTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MVMARVMPRVVLGTTGSSRVTIV*SIHCSS
Trigger: GCTGCTGCAGTGGATCGAGCAAACGATCGTGACCCT...TGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCCCGCATGGCAGCCTTaGGGTCGAAGCGGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPPAWQP*GRSGRP
Trigger: TGGCCGCCCGCTTCGACCGCAAGGCTGCCATGCGGG...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCTGTGGCAATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTAGCCACGGCGTCCACTaGCTGCACCCGGCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: AVAMAAFTTRSHELISACSHGVH*LHPAAV
Trigger: TACAGCGGCCGGGTGCAGGCAGTGGACGCCGTGGCT...ACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCATTGCCACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAATGCCTTCTTGCCGTCTaGCAGACGCCGAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKCLLAV*QTPKLL
Trigger: CAGCAGTTTCGGCGTCTGGCAGACGGCAAGAAGGCA...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGGCCAGGAGGGCCTCTaGCTCAGGCAGGGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: MAAFTTRSHELISACGWKGQEGL*LRQGGR
Trigger: CCGGCCACCCTGCCTGAGGCAGAGGCCCTCCTGGCC...TTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGCCTCGGCCACGGCCTaGATGTGGCGGCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGASATA*MWRPIS
Trigger: GGAGATCGGCCGCCACATGCAGGCCGTGGCCGAGGC...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAAGGCAGAAGGCGAGTaGCCTCGCATGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGEKAEGE*PRMAGE
Trigger: TTCTCCTGCCATGCGAGGGCACTCGCCTTCTGCCTT...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGCTTGTGGCCAGAGGCTaGGGTTGGCTGCTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQLVARG*GWLLSG
Trigger: TCCACTGAGCAGCCAACCGCAGCCTCTGGCCACAAG...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAATCCTGCTGCCGCATATaGAGATGCTGCTCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGESCCRI*RCCSGS
Trigger: AGACCCCGAGCAGCATCTGCATATGCGGCAGCAGGA...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAACATGGCTGGGTGGCTaGTGCTGTGGACAGCATGGA +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKTWLGG*CCGQHG
Trigger: TCCATGCTGTCCACAGCAGCAGCCACCCAGCCATGT...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTAGTGCCGCTCCAGGGTaGGCACCCGGCTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAASAAPG*APGSAP
Trigger: AGGTGCAGAGCCGGGTGCCCACCCTGGAGCGGCACT...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAAACTGCTGCCACCTGTaGTTGAGCTGCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKNCCHL*LSCSWV
Trigger: CACCCAGGAGCAGCTCAACCACAGGTGGCAGCAGTT...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGCCTTGGCTTGGGTGGTaGTCTCCAGCTCGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQPWLGW*SPARPS
Trigger: GCTGGGACGAGCTGGAGACCACCACCCAAGCCAAGG...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGAAGAGGCTGCGGGCCTTaGCTTGGGTGGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGRGCGP*LGWWSP
Trigger: TGGAGACCACCACCCAAGCCAAGGCCCGCAGCCTCT...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAATCTTCCACATCGCGGTaGAACTGGTGCTGCTCGCGA +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKSSTSR*NWCCSR
Trigger: TCGCGAGCAGCACCAGTTCCACCGCGATGTGGAAGA...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCACCCGCGCCAGGGCTTaGCGTGCCCCGTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPTRARA*RAPCRK
Trigger: CTTCCTGCACGGGGCACGCCAAGCCCTGGCGCGGGT...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAACCCGCGCCAGGGCTTaGCGTGCCCCGTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGTRARA*RAPCRK
Trigger: CTTCCTGCACGGGGCACGCCAAGCCCTGGCGCGGGT...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCGGGTGCTTGTGTGGATaGTGGTGGCCGTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPGCLCG*WWPWLG
Trigger: ACCCAGCCACGGCCACCACCATCCACACAAGCACCC...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGCAGGGTGGCAGCATaGGCTGACTCGGTAGACCTG +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGEGRVAA*ADSVDL
Trigger: CAGGTCTACCGAGTCAGCCCATGCTGCCACCCTGCC...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGCACTTCTCCGTGGTATaGCACTCCCGCGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQHFSVV*HSRAGC
Trigger: GCAGCCAGCGCGGGAGTGCCATACCACGGAGAAGTG...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCTGGGGGCATGGTCATaGCCCGGGTCATGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPLGAWS*PGSCPG
Trigger: CCCGGGGCATGACCCGGGCCATGACCATGCCCCCAG...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGGGGAGGGAGTTGGCCTaGGACCTTGCCCCCAACTAC +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQGRELA*DLAPNY
Trigger: GTAGTTGGGGGCAAGGTCCCAGGCCAACTCCCTCCC...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGAGAGGGGGTTACCTaGGTCCCACCACCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGEGEGVT*VPPPVW
Trigger: CCAGACTGGTGGTGGGACCCAGGTAACCCCCTCTCC...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAAGATGGAGTGGCAGCTaGAGTTACAGGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKRWSGS*SYRVGV
Trigger: CACCCCCACCCTGTAACTCCAGCTGCCACTCCATCT...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAACCAGACTCAAGGCGGTaGCTGTCCCCGAACAACACA +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGEPDSRR*LSPNNT
Trigger: TGTGTTGTTCGGGGACAGCCACCGCCTTGAGTCTGG...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGGGCTGTGTGCTTGTTaGGCAGGCGGAGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGGLCAC*AGGGHR
Trigger: CCGGTGCCCTCCGCCTGCTCAACAAGCACACAGCCC...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCCATATTCCTGGCTGCTaGGCACGCCCTCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPHIPGC*ARPQPD
Trigger: GTCAGGCTGAGGGCGTGCTCAGCAGCCAGGAATATG...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTGGGCCTCGGCAGCGTTaGGGTCGCGGCCAGTCCCGT +
Preference number: 4 (lower is better)
Translates to: REAELFNHLLGQTQGGGCGPRQR*GRGQSR
Trigger: ACGGGACTGGCCGCGACCTCAACGCTGCCGAGGCCC...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGTTCCCGGACAGCCTTaGAGAAGCGGAACTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKVPGQP*RSGTCL
Trigger: CAGACAAGTTCCGCTTCTTCAAGGCTGTCCGGGAAC...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGCGCCGTGCCTGCAGCTaGGACAGCTTCTCTGAGATC +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGERRACS*DSFSEI
Trigger: GATCTCAGAGAAGCTGTCTCAGCTGCAGGCACGGCG...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAAAGCGGGCGGCCAGCTaGTCCAGCTTCTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGKRAAS*SSFSWR
Trigger: CCGCCAGGAGAAGCTGGAGCAGCTGGCCGCCCGCTT...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGACGGGCGGCCACCATCTaGCGCAAGAAGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRRAATI*RKKSQS
Trigger: GCTCTGGGACTTCTTGCGGCAGATGGTGGCCGCCCG...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGACGCACCCTCTCGGCCTaGACGGCGATGTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGRTLSA*TAMSAS
Trigger: GGAGGCAGACATCGCCGTGCAGGCCGAGAGGGTGCG...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGGCCAGGAGGTGCTGCTaGTCCCGCACCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGARRCC*SRTQAS
Trigger: TGAGGCCTGGGTGCGGGAGCAGCAGCACCTCCTGGC...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGCCAGGAGGTGCTGCTaGTCCCGCACCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGARRCC*SRTQAS
Trigger: TGAGGCCTGGGTGCGGGAGCAGCAGCACCTCCTGGC...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGACCAACTGCTGGCCCTaGTCCAGGGTGAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGETNCWP*SRVSFR
Trigger: CCTGAAGCTCACCCTGGAGCAGGGCCAGCAGTTGGT...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGTGCCTGGCTAGAGCCTaGGTGGAGAACTCGTCGTGC +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGECLARA*VENSSC
Trigger: GCACGACGAGTTCTCCACGCAGGCTCTAGCCAGGCA...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACAGTGGGCACCCGGCTCTaGACCTCGGGCGTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTVGTRL*TSGVRL
Trigger: GAGCCGCACGCCCGAGGTGCAGAGCCGGGTGCCCAC...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGAGACGCCGAAACTGCTaGCACCTGTGGTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQRRRNC*HLWLSC
Trigger: GCAGCTCAACCACAGGTGGCAGCAGTTTCGGCGTCT...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACAGGCCAGGAGGGCCTCTaGCTCAGGCAGGGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTGQEGL*LRQGGR
Trigger: CCGGCCACCCTGCCTGAGGCAGAGGCCCTCCTGGCC...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCTCTCCCCGCAGGGCTaGATGTTGGGCCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPLSPQG*MLGQEG
Trigger: GCCCTCCTGGCCCAACATGCAGCCCTGCGGGGAGAG...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCTGGCATCAAAGAGGCTaGGGGCCTTGGCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPWHQRG*GPWLGW
Trigger: CCACCCAAGCCAAGGCCCGCAGCCTCTTTGATGCCA...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTTCTCTCCACCTCCCCTaGACCCTGGTCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAASLHLP*TLVLLG
Trigger: GCCCAGGAGGACCAGGGTGCAGGGGAGGTGGAGAGA...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAACGAGTGCTCTCTGGGTaGTCGTGGTCAATCATGTCC +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGERVLSG*SWSIMS
Trigger: GGACATGATTGACCACGAGCACCCAGAGAGCACTCG...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGACCCTCAATCAGCTAGCCGGAGGTGCTCCTaGAGGCGCTCCCGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: TRSHELISACGWKDPQSASRRCS*RRSRRS
Trigger: AGAGCGGCGGGAGCGCCTGCAGGAGCACCTCCGGCT...AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCGGCCACGGTGGCCCGTaGAGCATGGCCCCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPGHGGP*SMAPSN
Trigger: ATTGCTGGGGGCCATGCTGCACGGGCCACCGTGGCC...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACCGCCAGGGCTTGGCGTaGCCCGTGCAGGAAGCGCTG +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYRQGLA*PVQEAL
Trigger: CAGCGCTTCCTGCACGGGGCACGCCAAGCCCTGGCG...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTTCCGGAAGCTGCTGCTaGTTGTGCTGCACCCGCGCC +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAASGSCC*LCCTRA
Trigger: GGCGCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGA...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCGCACAGTGTCGGCGCTaGAGGGCCTCGGCAGCGTTG +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPAQCRR*RASAAL
Trigger: CAACGCTGCCGAGGCCCTGCAGCGCCGACACTGTGC...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAATCGGGGAAGCTGCTGTaGTCAAGTCTCTGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKSGKLL*SSLCCP
Trigger: GGGACAACAGAGACTTGAGCACAGCAGCTTCCCCGA...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAGCCCTTCGGGGAAGCTaGTGTGCTCAAGTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGEALRGS*CAQVSV
Trigger: AACAGAGACTTGAGCACAGCAGCTTCCCCGAAGGGC...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGTCATCTGGCACTTCTaGCCCCAGGGCCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGEVIWHF*PQGLLQ
Trigger: CTGAAGCAGGCCCTGGGGGCAGAAGTGCCAGATGAC...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGCAAGGCGTCCAGGGTTaGCCGGTGGCTTCGAATCTC +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGEQGVQG*PVASNL
Trigger: GAGATTCGAAGCCACCGGCCAACCCTGGACGCCTTG...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCAGTGCCGCTCCAGGGTaGGCACCCGGCTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPSAAPG*APGSAP
Trigger: AGGTGCAGAGCCGGGTGCCCACCCTGGAGCGGCACT...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGACGGCTATACTCGCTCTaGGCCCGCTCCACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRRLYSL*ARSTSP
Trigger: GGGAGAGGTGGAGCGGGCCCAGAGCGAGTATAGCCG...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCTGTGGCAATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTCGTAGGAAGAGGCACTaGGGGTCAGCCTGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: AVAMAAFTTRSHELISACRRKRH*GSAWSR
Trigger: CCGGGACCAGGCTGACCCCCAGTGCCTCTTCCTACG...ACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCATTGCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp GCTGTGGCAATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTCTGCGGGCCTTGGCTTaGGTGGTGGTCTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: AVAMAAFTTRSHELISACLRALA*VVVSSS
Trigger: CGAGCTGGAGACCACCACCCAAGCCAAGGCCCGCAG...ACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCATTGCCACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGACAGCTCAGCTCGGTTaGCATCAAAGAGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQTAQLG*HQRGCG
Trigger: CCCGCAGCCTCTTTGATGCCAACCGAGCTGAGCTGT...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGCGTTCCCGCATGGGCTaGCACAAGGCCCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQRSRMG*HKALNF
Trigger: GAAGTTCAGGGCCTTGTGCCAGCCCATGCGGGAACG...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGACCATGGAGCTGGCCATaGGCAGCCGCTCTGTCACCC +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRPWSWP*AAALSP
Trigger: GGGTGACAGAGCGGCTGCCCATGGCCAGCTCCATGG...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGACCGCCAGCTGGTGGATaGTCTGCGCGTAGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRPPAGG*SARSRP
Trigger: TGGCCGACTACGCGCAGACCATCCACCAGCTGGCGG...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGATCGTCCTGCACCTGCTaGACCTGGGGGCTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRSSCTC*TWGLRA
Trigger: GGCCCTCAGCCCCCAGGTCCAGCAGGTGCAGGACGA...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGACCCCTGGAGGCACACTaGCTGTGGGTTCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRPLEAH*LWVREQ
Trigger: CTGCTCCCGAACCCACAGCCAGTGTGCCTCCAGGGG...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAGGATGGTGGTGGCCGTaGCTGGGTTCCGTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRGWWWP*LGSVPG
Trigger: ACCTGGGACGGAACCCAGCCACGGCCACCACCATCC...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACCTGGGGCATTGCAGATaGGGCCGGGCCCCGAGTCCG +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYLGHCR*GRAPSP
Trigger: CGGACTCGGGGCCCGGCCCCATCTGCAATGCCCCAG...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CACTGGAGGTCACTGTCAGAGGGAAATGAGACCAGGTCAGGGAAGCTCTCAGTGCTGGGGCATTGCAGATaGGGCCGGGCCCCGAGTCCG +
Preference number: 4 (lower is better)
Translates to: HWRSLSEGNETRSGKLSVLGHCR*GRAPSP
Trigger: CGGACTCGGGGCCCGGCCCCATCTGCAATGCCCCAG...CACTGAGAGCTTCCCTGACCTGGTCTCATTTCCCTCTGACAGTGACCTCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCTGCTCCTGGGCAGATaGCTCTGGGCCTCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPLLLGR*LWASRR
Trigger: CCGCCTCGAGGCCCAGAGCCATCTGCCCAGGAGCAG...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCATGGCACTCCCGCGCTaGCTGCCTTGGCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPMALPR*LPWHPC
Trigger: ACAAGGATGCCAAGGCAGCCAGCGCGGGAGTGCCAT...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGACAGGCACTTCTCCGTaGTATGGCACTCCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQTGTSP*YGTPAL
Trigger: CAGCGCGGGAGTGCCATACCACGGAGAAGTGCCTGT...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGATGCCCCGGGTGGTGCTaGGCACCACCGGCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRCPGWC*APPALQ
Trigger: CTGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCA...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCGGGTCATGCCCCGGGTaGTGCTGGGCACCACCGGCT +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVGSCPG*CWAPPA
Trigger: AGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCC...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCTGGGGGCATGGTCATaGCCCGGGTCATGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVLGAWS*PGSCPG
Trigger: CCCGGGGCATGACCCGGGCCATGACCATGCCCCCAG...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAAGAAGTCGGCGGGGGTaGGAGAGGGGGTTACCTGGG +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRRSRRG*ERGLPG
Trigger: CCCAGGTAACCCCCTCTCCCACCCCCGCCGACTTCT...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGCAGCCACTCCCCACATaGCCTATGTTGAGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGEQPLPT*PMLRVR
Trigger: CCGCACCCTCAACATAGGCCATGTGGGGAGTGGCTG...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGAGATGGAGTGGCAGCTaGAGTTACAGGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQRWSGS*SYRVGV
Trigger: CACCCCCACCCTGTAACTCCAGCTGCCACTCCATCT...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACCACACATGGCTGGGTaGCTGCTGCTGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGPHMAG*LLLWTA
Trigger: TGCTGTCCACAGCAGCAGCCACCCAGCCATGTGTGG...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACGCTTCTCCTGGCGGATaGGCTCGGTGCGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYASPGG*ARCAGP
Trigger: TGGCCCTGCGCACCGAGCTCATCCGCCAGGAGAAGC...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCAGGCCCCGGCCTCGCTaGGCATGGTGTAGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVRPRPR*AWCRAP
Trigger: TGGCGCTCTACACCATGCTCAGCGAGGCCGGGGCCT...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGCTGGATGCTCAGGGCTaGGGTGAGAGCTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGELDAQG*GESCLL
Trigger: AAGAAGGCAGCTCTCACCTCAGCCCTGAGCATCCAG...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAACCTGGCATCTCCGTGTaGGACAGAACATATTCCTGG +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKPGISV*DRTYSW
Trigger: CCAGGAATATGTTCTGTCTCACACGGAGATGCCAGG...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGCTGGCTTCTCAAGGGTaGGCTCTCGCCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQLASQG*ALALPC
Trigger: ACAAGGAAGGGCGAGAGCTCACCCTTGAGAAGCCAG...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGCTATCTACGCGCTCCTaGCCGATGGTGCTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGELSTRS*PMVLVS
Trigger: GGACACAAGCACCATCGGTCAGGAGCGCGTAGATAG...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTTCCCAGCAGGGGCTGTaGGGGCTCTCCATCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAASQQGL*GLSICA
Trigger: TGCACAGATGGAGAGCCCTCACAGCCCCTGCTGGGA...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCTCAGCCCCGACGGGTaGCACTGGGGGCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPLSPDG*HWGHGH
Trigger: ATGACCATGCCCCCAGTGTCACCCGTCGGGGCTGAG...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGACACCTGGAAGCCATTaGGAGCAGCTGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQTPGSH*EQLEME
Trigger: CTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGT...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGGTCTCACCTCTCCGTTaGCAATGCCTGCCCCTACTG +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQVSPLR*QCLPLL
Trigger: CAGTAGGGGCAGGCATTGTCAACGGAGAGGTGAGAC...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAACTGGTCTTGAACTCCTaGGCTCAAGTGACCCACTCA +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKLVLNS*AQVTHS
Trigger: TGAGTGGGTCACTTGAGCTCAGGAGTTCAAGACCAG...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp CTGTGGATGGAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGCCCGCATGGCAGCCTTaGGGTCGAAGCGGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LWMERPSISFKDTVLSWPPAWQP*GRSGRP
Trigger: TGGCCGCCCGCTTCGACCGCAAGGCTGCCATGCGGG...CGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTCCATCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCTGCTGCCTCGACAGCTaGCAGCTCCAGCCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPCCLDS*QLQPKV
Trigger: AACTTTGGGCTGGAGCTGGCAGCTGTCGAGGCAGCA...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CACTGGAGGTCACTGTCAGAGGGAAATGAGACCAGGTCAGGGAAGCTCTCAGTGAGCCACGGCGTCCACTaGCTGCACCCGGCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: HWRSLSEGNETRSGKLSVSHGVH*LHPAAV
Trigger: TACAGCGGCCGGGTGCAGGCAGTGGACGCCGTGGCT...CACTGAGAGCTTCCCTGACCTGGTCTCATTTCCCTCTGACAGTGACCTCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGACGGGCGGCCACCATCTaGCGCAAGAAGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGRAATI*RKKSQS
Trigger: GCTCTGGGACTTCTTGCGGCAGATGGTGGCCGCCCG...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGACCCTCAATCAGCTCGCACCCTCTCGGCCTaGACGGCGATGTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: TRSHELISACGWKDPQSARTLSA*TAMSAS
Trigger: GGAGGCAGACATCGCCGTGCAGGCCGAGAGGGTGCG...AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGACCCCGCAGGGCTGTGTaGTTGTTGAGCAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRPRRAV*LLSRRR
Trigger: CCTCCGCCTGCTCAACAAGCACACAGCCCTGCGGGG...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGGCTTGGAGTTCAGCTaGACGGGCAGAGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRGLEFS*TGRGLA
Trigger: AGCCAGGCCTCTGCCCGTGCAGCTGAACTCCAAGCC...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAGGACACCAGGCGCAGTaGGTCAACCAACCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRGHQAQ*VNQPGL
Trigger: GAGGCCTGGTTGGTTGACGCACTGCGCCTGGTGTCC...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCGTGGAGAACTCGTCGTaGCCCAGCTCGGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPVENSS*PSSGLD
Trigger: GTCCAGCCCCGAGCTGGGGCACGACGAGTTCTCCAC...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGTCCAGGGCCCGATGCTaGCTGGCTAGAGCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGSRARC*LARACV
Trigger: CACGCAGGCTCTAGCCAGGCAGCATCGGGCCCTGGA...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCTCCTCCAGGGCCCGATaGTGCCTGGCTAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPSSRAR*CLARAC
Trigger: GCAGGCTCTAGCCAGGCAGCATCGGGCCCTGGAGGA...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCTGCCTTCTTGCCGTCTaGCAGACGCCGAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPCLLAV*QTPKLL
Trigger: CAGCAGTTTCGGCGTCTGGCAGACGGCAAGAAGGCA...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGGCCTGGGTCTCCGTaGACTCTAAGTGGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGERPGSP*TLSGSS
Trigger: AGAACTACCACTTAGAGTGCACGGAGACCCAGGCCT...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAACAATCTTGCAGGAAATaGTGCTGCTCCCGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGEQSCRK*CCSRLS
Trigger: GGACAACCGGGAGCAGCAGCATTTCCTGCAAGATTG...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTCGGTGGAACTGGTGCTaGTCGCGAGAAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAARWNWC*SREACR
Trigger: CCTGCAGGCTTCTCGCGAGCAGCACCAGTTCCACCG...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGACGCTGGGCAGGTCCTTaGCATGCTCCATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRRWAGP*HAPWSW
Trigger: CCAGCTCCATGGAGCATGGCAAGGACCTGCCCAGCG...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGACCCTCAATCAGCTGCACCTAGAGCACGCTaGCGCTCCCTCAGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: TRSHELISACGWKDPQSAAPRAR*RSLRSA
Trigger: CGCGGACCTGAGGGAGCGGCAGCGTGCTCTAGGTGC...AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp GCCGCATATGCAGATGCTGCTCGGGGTCTTCAGTCTCACCTCTCCGTTGACAATGCACCTAGAGCACGCTaGCGCTCCCTCAGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: AAYADAARGLQSHLSVDNAPRAR*RSLRSA
Trigger: CGCGGACCTGAGGGAGCGGCAGCGTGCTCTAGGTGC...ATTGTCAACGGAGAGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGGCTCCTGACCGATGGTaGTTGTGTCCCGGGAGAACT +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQAPDRW*LCPGRT
Trigger: AGTTCTCCCGGGACACAAGCACCATCGGTCAGGAGC...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACACCGTGCAGGAAGCGCTaGAGCTCGTACGCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTPCRKR*SSYAAA
Trigger: GGCCGCGGCGTACGAGCTGCAGCGCTTCCTGCACGG...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CACTGGAGGTCACTGTCAGAGGGAAATGAGACCAGGTCAGGGAAGCTCTCAGTGGCTTGGCGTGCCCCGTaGAGGAAGCGCTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: HWRSLSEGNETRSGKLSVAWRAP*RKRCSS
Trigger: CGAGCTGCAGCGCTTCCTGCACGGGGCACGCCAAGC...CACTGAGAGCTTCCCTGACCTGGTCTCATTTCCCTCTGACAGTGACCTCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTCCCGTCCGGAAGCTaGTGCTGCTTGTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRVPSGS*CCLCCT
Trigger: GGTGCAGCACAAGCAGCAGCAGCTTCCGGACGGGAC...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACCCGTCGTCCTGCACCTaGTGGACCTGGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYPSSCT*WTWGLR
Trigger: CCTCAGCCCCCAGGTCCAGCAGGTGCAGGACGACGG...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CTGTGGATGGAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGCGGTGGCCGTCGTCCTaGACCTGCTGGACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LWMERPSISFKDTVLSWPRWPSS*TCWTWG
Trigger: CCCCCAGGTCCAGCAGGTGCAGGACGACGGCCACCG...CGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTCCATCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGATCATGCCCCGGGTGGTaGTGGGCACCACCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRSCPGW*WAPPAL
Trigger: AAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGA...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAATTGCCTAGACTGGAGTaGAGTGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKLPRLE*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACTCCAGTCTAGGCAA...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GCCGCATATGCAGATGCTGCTCGGGGTCTTCAGTCTCACCTCTCCGTTGACAATCCTCCTTCAGGCAGCTaGGCCGGCTCTCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: AAYADAARGLQSHLSVDNPPSGS*AGSPSQ
Trigger: CTGGGAGGGAGAGCCGGCCCAGCTGCCTGAAGGAGG...ATTGTCAACGGAGAGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCGCCAGGTCTCCCGCATaGCAGCCTTGCGGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPARSPA*QPCGRS
Trigger: GCTTCGACCGCAAGGCTGCCATGCGGGAGACCTGGC...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGATCGGCCACCAACTGCTaGCCCTGCTCCAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRSATNC*PCSRVS
Trigger: GCTCACCCTGGAGCAGGGCCAGCAGTTGGTGGCCGA...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGACGCTCCCACTGGGCTTaGAGTTCAGCTGCACGGGCA +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRRSHWA*SSAARA
Trigger: TGCCCGTGCAGCTGAACTCCAAGCCCAGTGGGAGCG...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGCAGTGGACAGCCCCAGCTCGGGGCTaGACACCAGGCGCAGTGCGT +
Preference number: 4 (lower is better)
Translates to: ERPSISFKDTVLSWPQWTAPARG*TPGAVR
Trigger: ACGCACTGCGCCTGGTGTCCAGCCCCGAGCTGGGGC...TGTCCACTGCGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCACTGGGGGTCAGCCTaGTCCCGGGTCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVHWGSA*SRVTSS
Trigger: CGAGGAGGTGACCCGGGACCAGGCTGACCCCCAGTG...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCTGGAAGCCGTGGGCCTaGGCCAGGCGACCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAAWKPWA*ARRPCR
Trigger: CCGGCAAGGTCGCCTGGCCCAGGCCCACGGCTTCCA...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCTGTGGCAATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTCCTTCAGATACCAGCTaGCGGCCAGCCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: AVAMAAFTTRSHELISACPSDTS*RPASRS
Trigger: GCTCCTGGAGGCTGGCCGCCAGCTGGTATCTGAAGG...ACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCATTGCCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAACCTCCCCTGCACCCTaGTCCTCCTGGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGTSPAP*SSWASA
Trigger: AGCACTGGCCCAGGAGGACCAGGGTGCAGGGGAGGT...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAACCTCCCCTGCACCCTaGTCCTCCTGGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRTSPAP*SSWASA
Trigger: AGCACTGGCCCAGGAGGACCAGGGTGCAGGGGAGGT...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGACCGCCAGCTGGTGGATaGTCTGCGCGTAGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRPPAGG*SARSRP
Trigger: TGGCCGACTACGCGCAGACCATCCACCAGCTGGCGG...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGCATTGGCCAGCGCATTaGCGCTATCTACGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGEHWPAH*RYLRAP
Trigger: AGGAGCGCGTAGATAGCGCCAATGCGCTGGCCAATG...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGGAGGCACACTGGCTGTaGGTTCGGGAGCAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGEAHWL*VREQAA
Trigger: AGCCGCCTGCTCCCGAACCCACAGCCAGTGTGCCTC...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCGGTGGTGGCCGTGGCTaGGTTCCGTCCCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVGGGRG*VPSQVV
Trigger: CACCACCTGGGACGGAACCCAGCCACGGCCACCACC...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGACCCTCAATCAGCTCTGCTCCTGGGCAGATaGCTCTGGGCCTCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TRSHELISACGWKDPQSALLLGR*LWASRR
Trigger: CCGCCTCGAGGCCCAGAGCCATCTGCCCAGGAGCAG...AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGACACTTCTCCGTGGTATaGCACTCCCGCGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRHFSVV*HSRAGC
Trigger: GCAGCCAGCGCGGGAGTGCCATACCACGGAGAAGTG...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCTGCCCCGGGTGGTGCTaGGCACCACCGGCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVCPGWC*APPALQ
Trigger: CTGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCA...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGAGTGGCTGAGACTGGCTaGGGCTGTAGCAATGCTTCC +
Preference number: 4 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGVAETG*GCSNAS
Trigger: GGAAGCATTGCTACAGCCCCAGCCAGTCTCAGCCAC...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGTTTGGAGCCCACTCTaGGGCTGTGATGTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKVWSPL*GCDVLV
Trigger: AACTAGCACATCACAGCCCCAGAGTGGGCTCCAAAC...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCGGCGCTGGTTCTCGCTaGGCCAGGTCTCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAAGAGSR*ARSPAW
Trigger: CCATGCGGGAGACCTGGCTCAGCGAGAACCAGCGCC...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGGCAGGGCAGAGGCGCTaGCGGCCCGCACCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQAGQRR*RPAPSR
Trigger: CCGAGAGGGTGCGGGCCGTCAGCGCCTCTGCCCTGC...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACATTGATGGCCACTGCCTaGGCGGGATGGCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATLMATA*AGWPAA
Trigger: GGCTGCCGGCCATCCCGCTCAGGCAGTGGCCATCAA...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTCGGGGCTCATGGCCCTaGATCTCTTTCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAARGSWP*ISFCRV
Trigger: GACCCTGCAGAAAGAGATTCAGGGCCATGAGCCCCG...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GCTGTGGCAATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTGGCTGGTCTGAGGGGTaGGGAACCAGAAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: AVAMAAFTTRSHELISACGWSEG*GTRRQK
Trigger: CTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCC...ACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCATTGCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp ATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAACGTGCCACGTTGTGCTaGCGAGCGGCGATGCGCTTG +
Preference number: 4 (lower is better)
Translates to: MAAFTTRSHELISACGWKRATLC*RAAMRL
Trigger: CAAGCGCATCGCCGCTCGGCAGCACAACGTGGCACG...TTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCAGCCGTGCCACGTTGTaGTGCCGAGCGGCGATGCGC +
Preference number: 4 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAASRATL*CRAAMR
Trigger: GCGCATCGCCGCTCGGCAGCACAACGTGGCACGGCT...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAAGTCCCAGAGCCGTaGCACGTTGTGCTGCCGAGC +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPEVPEP*HVVLPS
Trigger: GCTCGGCAGCACAACGTGGCACGGCTCTGGGACTTC...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGTCCTGGAACACCTTCTaGAGCTCCAGGTTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGESWNTF*SSRLRR
Trigger: CCTCCTCAACCTGGAGCTGCAGAAGGTGTTCCAGGA...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGCCTCCACCAGCTCGTaGAGCTGCAGCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: MAAFTTRSHELISACGWKASTSS*SCSRSS
Trigger: GGAGGACCTGCTGCAGCTGCACGAGCTGGTGGAGGC...TTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACGGCCCGCCGCGCCGCTaGCAACTCGCACAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: VDNACPYCRTASIGCPIYGPPRR*QLAQCL
Trigger: GAGGCACTGTGCGAGTTGGCAGCGGCGCGGCGGGCC...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACACCCTCGGCCACCAACTaGTGGCCCTGCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATPSATN*WPCSRV
Trigger: CACCCTGGAGCAGGGCCAGCAGTTGGTGGCCGAGGG...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTTGCCTGGCTAGAGCCTaGGTGGAGAACTCGTCGTGC +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAACLARA*VENSSC
Trigger: GCACGACGAGTTCTCCACGCAGGCTCTAGCCAGGCA...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGACCACAGCAGTCTGAGTaGGGCCTAGCCAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGPQQSE*GLARPG
Trigger: TCCAGGCCTGGCTAGGCCGCACTCAGACTGCTGTGG...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGCCATGAATGCCTGGTaGTTCTGCCACTTAGTATGC +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKAMNAW*FCHLVC
Trigger: GCATACTAAGTGGCAGAAGCACCAGGCATTCATGGC...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAGGCCTGGGCCTGGATTaGCTCCACCTCCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRGLGLD*LHLLLS
Trigger: AGAGAGAAGGAGGTGGAGGCAATCCAGGCCCAGGCC...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGCAGTGGACATGCTCGCGAGAAGCCTaGAGGCGCCGGCAGCGTTCC +
Preference number: 4 (lower is better)
Translates to: ERPSISFKDTVLSWPQWTCSREA*RRRQRS
Trigger: GGAACGCTGCCGGCGCCTGCAGGCTTCTCGCGAGCA...TGTCCACTGCGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGGTGCTTCTTCACCTCTaGCTGGGCACTCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQVLLHL*LGTQLI
Trigger: GATGAGCTGAGTGCCCAGGCAGAGGTGAAGAAGCAC...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGGGATGGATATCCGAGTaGTCTCTGGGTGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQGWISE*SLGARG
Trigger: ACCACGAGCACCCAGAGAGCACTCGGATATCCATCC...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGACCCTCAATCAGCTCCGTCCGGAAGCTGCTaGTGCTTGTGCTGCACCCGC +
Preference number: 4 (lower is better)
Translates to: TRSHELISACGWKDPQSAPSGSC*CLCCTR
Trigger: GCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGACGG...AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp GCCGCATATGCAGATGCTGCTCGGGGTCTTCAGTCTCACCTCTCCGTTGACAATCCGTCCGGAAGCTGCTaGTGCTTGTGCTGCACCCGC +
Preference number: 4 (lower is better)
Translates to: AAYADAARGLQSHLSVDNPSGSC*CLCCTR
Trigger: GCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGACGG...ATTGTCAACGGAGAGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGTCCCGTCCGGAAGCTaGTGCTGCTTGTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPVPSGS*CCLCCT
Trigger: GGTGCAGCACAAGCAGCAGCAGCTTCCGGACGGGAC...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGCAGAGCCAGGCCTCTaGCATCCCTGCATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAAAEPGL*HPCISS
Trigger: GGAAGAGATGCAGGGATGGCAGAGGCCTGGCTCTGC...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCAACCCAGCTCAGCGCTaGGCACCAGTGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVNPAQR*APVAPG
Trigger: GCCAGGAGCCACTGGTGCGCAGCGCTGAGCTGGGTT...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGACAACTTCGTCGACCGTaGAACCCAGCTCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRQLRRP*NPAQRC
Trigger: GCAGCGCTGAGCTGGGTTGCACGGTCGACGAAGTTG...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCCACTCCCGCGCTGGCTaGCTTGGCATCCTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPHSRAG*LGILVK
Trigger: TTTTACAAGGATGCCAAGGCAGCCAGCGCGGGAGTG...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGCACTCCCGCGCTGGCTaGCTTGGCATCCTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGEHSRAG*LGILVK
Trigger: TTTTACAAGGATGCCAAGGCAGCCAGCGCGGGAGTG...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGACCCTCAATCAGCTAATCAAAGGCGACGCTaGCCTGGGCCCTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TRSHELISACGWKDPQSANQRRR*PGPWPG
Trigger: GCCTGGCCAGGGCCCAGGGCAGCGTCGCCTTTGATT...AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACATCATGGCCCGGGTCATaGCCCGGGTGGTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATSWPGS*PGWCWA
Trigger: TGCCCAGCACCACCCGGGGCATGACCCGGGCCATGA...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGTTCTTAAGGAATCATaGCCTGAAGTCCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKVLKES*PEVLLP
Trigger: CGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAAC...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGTTCAAGCAATGCTCCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQFKQCS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGGAGCATTGCTTGAA...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGACTTCTCATCTGGCTaGTCCACATTCACGTCTTCG +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKDFSSG*STFTSS
Trigger: CGAAGACGTGAATGTGGACCAGCCAGATGAGAAGTC...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCTGCTCCAGCTTCTCCTaGCGGATGAGCTCGGTGCGC +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPCSSFS*RMSSVR
Trigger: GCGCACCGAGCTCATCCGCCAGGAGAAGCTGGAGCA...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCGGGCCCGATGCTGCCTaGCTAGAGCCTGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVGPDAA*LEPAWR
Trigger: TCTCCACGCAGGCTCTAGCCAGGCAGCATCGGGCCC...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACACACTGGGGGTCAGCCTaGTCCCGGGTCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTHWGSA*SRVTSS
Trigger: CGAGGAGGTGACCCGGGACCAGGCTGACCCCCAGTG...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCTCATCCGAGTGCAGCTaGGCCTGCAGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPSSECS*ACRLSS
Trigger: GCTGGAGAGCCTGCAGGCCCAGCTGCACTCGGATGA...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCTGGGCCAGTGCTTTaGCCTGGGCCTGGATTGCCT +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPPGPVL*PGPGLP
Trigger: AGGCAATCCAGGCCCAGGCCAAAGCACTGGCCCAGG...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTACATCGCGGTGGAACTaGTGCTGCTCGCGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAATSRWN*CCSREA
Trigger: GGCTTCTCGCGAGCAGCACCAGTTCCACCGCGATGT...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGCGAAGTTCCAGCTCGTaGCCCAGGCGTTTCCACATT +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQRSSSS*PRRFHI
Trigger: AATGTGGAAACGCCTGGGCCACGAGCTGGAACTTCG...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAATCCTTGGCCTTCTCCTaGCCCATCATGTGTAATTCC +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGESLAFS*PIMCNS
Trigger: GGAATTACACATGATGGGCCAGGAGAAGGCCAAGGA...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCCACTCAGCTCATCCTTaGCCTTCTCCTGGCCCATCA +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPHSAHP*PSPGPS
Trigger: TGATGGGCCAGGAGAAGGCCAAGGATGAGCTGAGTG...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAATATCCGAGTGCTCTCTaGGTGCTCGTGGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKYPSAL*VLVVNH
Trigger: ATGATTGACCACGAGCACCCAGAGAGCACTCGGATA...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGTACAGCTTGTCCACCTaGGCTTGGCGGATGGATATC +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQYSLST*AWRMDI
Trigger: GATATCCATCCGCCAAGCCCAGGTGGACAAGCTGTA...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGCGCGCTCCTGACCGATaGTGCTTGTGTCCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGRAPDR*CLCPGR
Trigger: TCTCCCGGGACACAAGCACCATCGGTCAGGAGCGCG...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTGCCACGGCCTGCATGTaGCGGCCGATCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: REAELFNHLLGQTQGGGCATACM*RPISSA
Trigger: GGCTGAGGAGATCGGCCGCCACATGCAGGCCGTGGC...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCGCATAGTGGCTCCTaGCCAGCAGCTCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPPHSGS*PAAPSP
Trigger: TGGGGAAGGAGCTGCTGGCCAGGAGCCACTATGCGG...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGCCACTGCTGACTTCTaGAAGGCCTCGTGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRATADF*KASCRL
Trigger: CAAGCGGCACGAGGCCTTCCAGAAGTCAGCAGTGGC...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACAGCCCACCAGGTCCCCTaGAGGCACACTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATAHQVP*RHTGCG
Trigger: CCCACAGCCAGTGTGCCTCCAGGGGACCTGGTGGGC...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGTCAGAAGCTGTCTaGCCGCCCACCAGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGVSEAV*PPTRSP
Trigger: AGGGGACCTGGTGGGCGGCCAGACAGCTTCTGACAC...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGGTTCCGTCCCAGGTaGTGTCAGAAGCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAAGFRPR*CQKLSG
Trigger: GCCAGACAGCTTCTGACACCACCTGGGACGGAACCC...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CTGTGGATGGAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGGGTGGTGGCCGTGGCTaGGTTCCGTCCCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LWMERPSISFKDTVLSWPGGGRG*VPSQVV
Trigger: CACCACCTGGGACGGAACCCAGCCACGGCCACCACC...CGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTCCATCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGGGGTGCTTGTGTGGATaGTGGTGGCCGTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGGCLCG*WWPWLG
Trigger: ACCCAGCCACGGCCACCACCATCCACACAAGCACCC...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGCCCTCCATCTGCTCCTaGGCAGATGGCTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGPSICS*ADGSGP
Trigger: AGGCCCAGAGCCATCTGCCCAGGAGCAGATGGAGGG...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAACAGGCACTTCTCCGTaGTATGGCACTCCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRTGTSP*YGTPAL
Trigger: CAGCGCGGGAGTGCCATACCACGGAGAAGTGCCTGT...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGCAGTGGACAAAGGCGACGCTGCCCTaGGCCCTGGCCAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: ERPSISFKDTVLSWPQWTKATLP*ALARLT
Trigger: TGTCAGCCTGGCCAGGGCCCAGGGCAGCGTCGCCTT...TGTCCACTGCGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGACACTGTGCTGAGTTaGCCGCAGTGGACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAADTVLS*PQWTAG
Trigger: CCCTGCTGTCCACTGCGGCCAACTCAGCACAGTGTC...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGACCTCTGACTGTCATCTaGCACTTCTGCCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRPLTVI*HFCPQG
Trigger: GCCCTGGGGGCAGAAGTGCCAGATGACAGTCAGAGG...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCGGTCCCTTGATCTACTaGAGAGCAGACGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPGPLIY*RADGKW
Trigger: CCACTTGCCGTCTGCTCTCCAGTAGATCAAGGGACC...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCCATCCATCTGCAGGTTaGCCTCATCCATCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPHPSAG*PHPSRA
Trigger: TGCTCTGGATGGATGAGGTCAACCTGCAGATGGATG...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGACCTCCAAAACCAGCTaGAGCCAGTCCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGETSKTS*SQSIFS
Trigger: GGAGAAGATGGACTGGCTTCAGCTGGTTTTGGAGGT...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACGGTGGCAGCATGGGCTaGCTCGGTAGACCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYGGSMG*LGRPAL
Trigger: CAGAGCAGGTCTACCGAGTCAGCCCATGCTGCCACC...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCAGCAGGCAGTTGTCCTaGCAAGAGGGCGGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPSRQLS*QEGGPC
Trigger: ACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCT...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGATCAAGGACACTGTGCTaGGTTGGCCGCAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRSRTLC*VGRSGQ
Trigger: CTGTCCACTGCGGCCAACTCAGCACAGTGTCCTTGA...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACACTGTCCACACCGTGGTaGGGGACAGAGGCACGAGGC +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTLSTPW*GTEARG
Trigger: GCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAG...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGTTTCCACCACTGGGCTaGGCAGTGGCTGAGACTGGC +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGFPPLG*AVAETG
Trigger: GCCAGTCTCAGCCACTGCTCAGCCCAGTGGTGGAAA...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAACATGGCTTCCCAGAGTaGCTTCATTCTGTTGATCAG +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGEHGFPE*LHSVDQ
Trigger: CTGATCAACAGAATGAAGTCACTCTGGGAAGCCATG...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGACCTTGCCAATTCTCTTaGCTTCCACGGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRPCQFS*LPRPGP
Trigger: AGGCCCTGGCCGTGGAAGGCAAGAGAATTGGCAAGG...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCTGTGGCAATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTAGGGAGTTGGCCAACTaGCGGTCATTGAGGGTCACG +
Preference number: 4 (lower is better)
Translates to: AVAMAAFTTRSHELISACRELAN*RSLRVT
Trigger: CGTGACCCTCAATGACCGGCAGTTGGCCAACTCCCT...ACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCATTGCCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGATGCTGCCTCGACAGCTaGCAGCTCCAGCCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRCCLDS*QLQPKV
Trigger: AACTTTGGGCTGGAGCTGGCAGCTGTCGAGGCAGCA...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCGTGCCACGTTGTGCTaGCGAGCGGCGATGCGCTTG +
Preference number: 4 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAARATLC*RAAMRL
Trigger: CAAGCGCATCGCCGCTCGGCAGCACAACGTGGCACG...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTACTCTTTCCCTGGGTTaGAGAAGCGCAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAATLSLG*RSAGQR
Trigger: CCTCTGCCCTGCGCTTCTGCAACCCAGGGAAAGAGT...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCACCAACTGCTGGCCCTaGTCCAGGGTGAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPTNCWP*SRVSFR
Trigger: CCTGAAGCTCACCCTGGAGCAGGGCCAGCAGTTGGT...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CACTGGAGGTCACTGTCAGAGGGAAATGAGACCAGGTCAGGGAAGCTCTCAGTGGGCTTGGAGTTCAGCTaGACGGGCAGAGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HWRSLSEGNETRSGKLSVGLEFS*TGRGLA
Trigger: AGCCAGGCCTCTGCCCGTGCAGCTGAACTCCAAGCC...CACTGAGAGCTTCCCTGACCTGGTCTCATTTCCCTCTGACAGTGACCTCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACATCCAGGGCCCGATGCTaGCTGGCTAGAGCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATSRARC*LARACV
Trigger: CACGCAGGCTCTAGCCAGGCAGCATCGGGCCCTGGA...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAAGGGTCTCGAACCTCTaGTGCACGACCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGRVSNL*CTTSRS
Trigger: GGACCTGGAGGTCGTGCAGCAGAGGTTCGAGACCCT...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGGCCAGACGCCGAAACTaGTGCCACCTGTGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGARRRN*CHLWLS
Trigger: GCTCAACCACAGGTGGCAGCAGTTTCGGCGTCTGGC...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCAGGCCTGGGTCTCCGTaGACTCTAAGTGGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPRPGSP*TLSGSS
Trigger: AGAACTACCACTTAGAGTGCACGGAGACCCAGGCCT...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCCAATCTTGCAGGAAATaGTGCTGCTCCCGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPQSCRK*CCSRLS
Trigger: GGACAACCGGGAGCAGCAGCATTTCCTGCAAGATTG...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAATGCCTGGTGCTTCTaGCACTTAGTATGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGENAWCF*HLVCRL
Trigger: CAACCTGCATACTAAGTGGCAGAAGCACCAGGCATT...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGATGGCATCAAAGAGGCTaGGGGCCTTGGCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRWHQRG*GPWLGW
Trigger: CCACCCAAGCCAAGGCCCGCAGCCTCTTTGATGCCA...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGCAGTGGACATCTCTCCACCTCCCCTaGACCCTGGTCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ERPSISFKDTVLSWPQWTSLHLP*TLVLLG
Trigger: GCCCAGGAGGACCAGGGTGCAGGGGAGGTGGAGAGA...TGTCCACTGCGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGATCATGTGTAATTCCTaGTCGCCCATCCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGEIMCNS*SPIQAS
Trigger: GGAGGCCTGGATGGGCGAGCAGGAATTACACATGAT...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGAATCATGTGTAATTCCTaGTCGCCCATCCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGIMCNS*SPIQAS
Trigger: GGAGGCCTGGATGGGCGAGCAGGAATTACACATGAT...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCAATCATGTCCTGGCTaGTGGCCGCCAGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPQSCPG*WPPAGG
Trigger: TCCACCAGCTGGCGGCCAGCAGCCAGGACATGATTG...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGCAGTGGACATGCTGCTGCTTGTGCTaGACCCGCGCCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ERPSISFKDTVLSWPQWTCCCLC*TRARAW
Trigger: CCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCA...TGTCCACTGCGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACATGCTGCTGCTTGTGCTaGACCCGCGCCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATCCCLC*TRARAW
Trigger: CCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCA...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACATCCGGAAGCTGCTGCTaGTTGTGCTGCACCCGCGCC +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTSGSCC*LCCTRA
Trigger: GGCGCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGA...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGCAGAGCCAGGCCTCTaGCATCCCTGCATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPAEPGL*HPCISS
Trigger: GGAAGAGATGCAGGGATGGCAGAGGCCTGGCTCTGC...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACACCAGTGGCTCCTGGCTaGAGAGCCAGGCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTPVAPG*RARPLP
Trigger: TGGCAGAGGCCTGGCTCTGCAGCCAGGAGCCACTGG...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCAGTGGCTCCTGGCTaGAGAGCCAGGCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: REAELFNHLLGQTQGGGCPVAPG*RARPLP
Trigger: TGGCAGAGGCCTGGCTCTGCAGCCAGGAGCCACTGG...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGTCTGCCCCCAGGGCCTaGTTCAGCTCTGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGSAPRA*FSSERF
Trigger: GAACCTCTCAGAGCTGAAGCAGGCCCTGGGGGCAGA...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCGTCATCTGGCACTTCTaGCCCCAGGGCCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPVIWHF*PQGLLQ
Trigger: CTGAAGCAGGCCCTGGGGGCAGAAGTGCCAGATGAC...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCGAGGCTGCGGTTGGCTaGTCAGTGGAAATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPEAAVG*SVEISP
Trigger: GGGGCTGATTTCCACTGAGCAGCCAACCGCAGCCTC...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GCCGCATATGCAGATGCTGCTCGGGGTCTTCAGTCTCACCTCTCCGTTGACAATGGCTTCCTGCTCCTGTaGTCCGCTCTCCTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: AAYADAARGLQSHLSVDNGFLLL*SALLVA
Trigger: GGCCACAAGGAGAGCGGAGCACAGGAGCAGGAAGCC...ATTGTCAACGGAGAGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGTGGAGACAAACACTGTaGCCTGAAAGCTCCGATTGC +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQWRQTL*PESSDC
Trigger: GCAATCGGAGCTTTCAGGGCACAGTGTTTGTCTCCA...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAGAGACTACAGGCACATaGCACTACACCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGEETTGT*HYTWLI
Trigger: AATTAGCCAGGTGTAGTGGCATGTGCCTGTAGTCTC...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGTCTGCCTCCATGGCATaGTCCAGCACCTTGCCAATT +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGESASMA*SSTLPI
Trigger: AATTGGCAAGGTGCTGGACCATGCCATGGAGGCAGA...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAGACTGCAGCTGGTTCTaGACCCCGCTAAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRDCSWF*TPLREL
Trigger: CAACTCCCTTAGCGGGGTCCAGAACCAGCTGCAGTC...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAAGCCCAAAGTTGTCCTaGGACACGAGGCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRSPKLS*DTRRWF
Trigger: GAACCAGCGCCTCGTGTCCCAGGACAACTTTGGGCT...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCTGGCTAGAGCCTGCGTaGAGAACTCGTCGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPWLEPA*RTRRAP
Trigger: TGGGGCACGACGAGTTCTCCACGCAGGCTCTAGCCA...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGTGGTTGAGCTGCTCCTaGGTGTTGACAATGCGGTCT +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGEWLSCS*VLTMRS
Trigger: AGACCGCATTGTCAACACCCAGGAGCAGCTCAACCA...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCTGCCTCAGGCAGGGTaGCCGGCCCTTCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: REAELFNHLLGQTQGGGCLPQAG*PALLQR
Trigger: CCTCTGAAGAAGGGCCGGCCACCCTGCCTGAGGCAG...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAAGCCTGGAGTGTCCCTaGCATCTCCGTGTGAGACAG +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRSLECP*HLRVRQ
Trigger: CTGTCTCACACGGAGATGCCAGGGACACTCCAGGCT...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCGCAGCATCAGCAGCCTaGAGTGTCCCTGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPAASAA*SVPGIS
Trigger: GGAGATGCCAGGGACACTCCAGGCTGCTGATGCTGC...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CACTGGAGGTCACTGTCAGAGGGAAATGAGACCAGGTCAGGGAAGCTCTCAGTGCCTTGGCTTGGGTGGTaGTCTCCAGCTCGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: HWRSLSEGNETRSGKLSVPWLGW*SPARPS
Trigger: GCTGGGACGAGCTGGAGACCACCACCCAAGCCAAGG...CACTGAGAGCTTCCCTGACCTGGTCTCATTTCCCTCTGACAGTGACCTCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACACTGCGGGCCTTGGCTTaGGTGGTGGTCTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATLRALA*VVVSSS
Trigger: CGAGCTGGAGACCACCACCCAAGCCAAGGCCCGCAG...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGCTTGCTCCAGCACCTaGTGCTTCTTCACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAAACSST*CFFTSA
Trigger: GGCAGAGGTGAAGAAGCACCAGGTGCTGGAGCAAGC...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGACATTGGCCAGCGCATTaGCGCTATCTACGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRHWPAH*RYLRAP
Trigger: AGGAGCGCGTAGATAGCGCCAATGCGCTGGCCAATG...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGACCCTCAATCAGCTTCCCGGGGACGCTCCTaGGCATCCATCTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: TRSHELISACGWKDPQSASRGRS*ASICRL
Trigger: CAACCTGCAGATGGATGCCCAGGAGCGTCCCCGGGA...AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACACCCCTGGAGGCACACTaGCTGTGGGTTCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATPLEAH*LWVREQ
Trigger: CTGCTCCCGAACCCACAGCCAGTGTGCCTCCAGGGG...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCGTGTCAGAAGCTGTCTaGCCGCCCACCAGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVVSEAV*PPTRSP
Trigger: AGGGGACCTGGTGGGCGGCCAGACAGCTTCTGACAC...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCGGGAGGGAGTTGGCCTaGGACCTTGCCCCCAACTAC +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVGRELA*DLAPNY
Trigger: GTAGTTGGGGGCAAGGTCCCAGGCCAACTCCCTCCC...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGTGGAAGCTTCTGGAATaGCACGGACAGAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQWKLLE*HGQRGT
Trigger: TGTTCCTCTCTGTCCGTGCCATTCCAGAAGCTTCCA...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp CTGTGGATGGAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGACAGGGAGTGCGGCCTaGTGCGGCCGTCGCACACAT +
Preference number: 4 (lower is better)
Translates to: LWMERPSISFKDTVLSWPTGSAA*CGRRTH
Trigger: ATGTGTGCGACGGCCGCACCAGGCCGCACTCCCTGT...CGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTCCATCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp GCTGTGGCAATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTCCAGACTCAAGGCGGTaGCTGTCCCCGAACAACACA +
Preference number: 4 (lower is better)
Translates to: AVAMAAFTTRSHELISACPDSRR*LSPNNT
Trigger: TGTGTTGTTCGGGGACAGCCACCGCCTTGAGTCTGG...ACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCATTGCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGCGGTTGGCTGCTCAGTaGAAATCAGCCCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGRLAAQ*KSAPRG
Trigger: TCCCCTGGGGGCTGATTTCCACTGAGCAGCCAACCG...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACAGCTCCGCTCTCCTTGTaGCCAGAGGCTGCGGTTGGC +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTAPLSL*PEAAVG
Trigger: GCCAACCGCAGCCTCTGGCCACAAGGAGAGCGGAGC...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGAGGTGAGAGAATCACTTaGGCCCAGGAATTCGAGACC +
Preference number: 4 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGGERIT*AQEFET
Trigger: GGTCTCGAATTCCTGGGCCCAAGTGATTCTCTCACC...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTCCAACTGCCGGTCATTaGGGGTCACGATCGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAAPTAGH*GSRSFA
Trigger: AGCAAACGATCGTGACCCTCAATGACCGGCAGTTGG...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATAGCTTCTCCTGGCGGATaGGCTCGGTGCGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PIIVSLQCPQACQLGVQIASPGG*ARCAGP
Trigger: TGGCCCTGCGCACCGAGCTCATCCGCCAGGAGAAGC...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATAGGCGCTGGTTCTCGCTaGGCCAGGTCTCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: PIIVSLQCPQACQLGVQIGAGSR*ARSPAW
Trigger: CCATGCGGGAGACCTGGCTCAGCGAGAACCAGCGCC...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGCTGGATGCTCAGGGCTaGGGTGAGAGCTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGLDAQG*GESCLL
Trigger: AAGAAGGCAGCTCTCACCTCAGCCCTGAGCATCCAG...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACCTCTCAGCCGGGCGTTaGTGGCCACTGCCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: VDNACPYCRTASIGCPIYLSAGR*WPLPER
Trigger: CCGCTCAGGCAGTGGCCATCAACGCCCGGCTGAGAG...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGCAGTGGACAAGCACGCCCTCAGCCTaGCGAGCATCCCGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: ERPSISFKDTVLSWPQWTSTPSA*RASRRN
Trigger: ATTCCTGCGGGATGCTCGTCAGGCTGAGGGCGTGCT...TGTCCACTGCGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACCATATTCCTGGCTGCTaGGCACGCCCTCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYHIPGC*ARPQPD
Trigger: GTCAGGCTGAGGGCGTGCTCAGCAGCCAGGAATATG...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGATGCTGCGCTGCGTCTTaGTTCTTCTTGTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRCCAAS*FFLCLL
Trigger: GAGGAGGCACAAGAAGAATCAAGACGCAGCGCAGCA...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CTGTGGATGGAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGGCTGGACCTGGGGGCTaGGGGCCTGAATGTCATGCT +
Preference number: 4 (lower is better)
Translates to: LWMERPSISFKDTVLSWPAGPGG*GPECHA
Trigger: AGCATGACATTCAGGCCCTCAGCCCCCAGGTCCAGC...CGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTCCATCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCCCTGTAAGCCCAGCTTaGAGACATGTTTGCGCTTTC +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPPVSPA*RHVCAF
Trigger: GAAAGCGCAAACATGTCTTCAAGCTGGGCTTACAGG...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp TCCCCTCTTCTATGTCCTGTTCTTAAGGAATCATGCCCTGAAGTCCTGCTGCCGCTCAGCCCCGACGGGTaGCACTGGGGGCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: SPLLCPVLKESCPEVLLPLSPDG*HWGHGH
Trigger: ATGACCATGCCCCCAGTGTCACCCGTCGGGGCTGAG...CGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGACATAGAAGAGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp CACTGGAGGTCACTGTCAGAGGGAAATGAGACCAGGTCAGGGAAGCTCTCAGTGGGGCTCCTGCGCCTCTaGCTGTCATCTGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: HWRSLSEGNETRSGKLSVGLLRL*LSSGTS
Trigger: AGAAGTGCCAGATGACAGTCAGAGGCGCAGGAGCCC...CACTGAGAGCTTCCCTGACCTGGTCTCATTTCCCTCTGACAGTGACCTCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGACAAACACTGTGCCCTaGAAGCTCCGATTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGETNTVP*KLRLPN
Trigger: GTTTGGCAATCGGAGCTTTCAGGGCACAGTGTTTGT...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACAAGAGGCGGGCCGAGCTaGTGTCATTGTCCCAGTCCG +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTRGGPS*CHCPSP
Trigger: CGGACTGGGACAATGACAGCAGCTCGGCCCGCCTCT...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGTCCAAGTGCACTTTCTaGTCCTTGAGGAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQSKCTF*SLRNCS
Trigger: ACTGCAGTTCCTCAAGGAGCAGAAAGTGCACTTGGA...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAAGGGTCACGATCGTTTaGTCGATCCACTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRRVTIV*SIHCSS
Trigger: GCTGCTGCAGTGGATCGAGCAAACGATCGTGACCCT...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACAAGCGGGCGGCCAGCTaGTCCAGCTTCTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: VDNACPYCRTASIGCPIYKRAAS*SSFSWR
Trigger: CCGCCAGGAGAAGCTGGAGCAGCTGGCCGCCCGCTT...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGTCTCAATGGCTTCGTaGTTCCGTACTGCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAAVSMAS*FRTAAS
Trigger: CGAGGCAGCAGTACGGAAGCACGAAGCCATTGAGAC...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTACTCGGCGGCCAGCTCTaGAGCCACGGCGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLLGGQL*SHGVHC
Trigger: GCAGTGGACGCCGTGGCTGCAGAGCTGGCCGCCGAG...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACAGAAGTCCCAGAGCCGTaGCACGTTGTGCTGCCGAGC +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATEVPEP*HVVLPS
Trigger: GCTCGGCAGCACAACGTGGCACGGCTCTGGGACTTC...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACACCAGCTCGTGCAGCTaGAGCAGGTCCTCCACTCCT +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYTSSCS*SRSSTP
Trigger: AGGAGTGGAGGACCTGCTGCAGCTGCACGAGCTGGT...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCGCTCCGACACCAGCTaGGGGTCGCAAGGTCTATAC +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVRSDTS*GSQGLY
Trigger: GTATAGACCTTGCGACCCGCAGCTGGTGTCGGAGCG...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACAGGACACCAGGCGCAGTaGGTCAACCAACCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATGHQAQ*VNQPGL
Trigger: GAGGCCTGGTTGGTTGACGCACTGCGCCTGGTGTCC...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCAGCCCGTTGAGCCACTaGTCCTTCTCCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVSPLSH*SFSSTQ
Trigger: CTGGGTGGAGGAGAAGGAGCAGTGGCTCAACGGGCT...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGGCAGCCAGGGCATTTaGCTCTCGAGTCAGTTCGCC +
Preference number: 4 (lower is better)
Translates to: MAAFTTRSHELISACGWKGSQGI*LSSQFA
Trigger: GGCGAACTGACTCGAGAGGCAAATGCCCTGGCTGCC...TTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACGGCGTTGATGGCCACTaGCTGAGCGGGATGGCCGGC +
Preference number: 4 (lower is better)
Translates to: VDNACPYCRTASIGCPIYGVDGH*LSGMAG
Trigger: GCCGGCCATCCCGCTCAGGCAGTGGCCATCAACGCC...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGGCCATGAATGCCTGGTaGTTCTGCCACTTAGTATGC +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQAMNAW*FCHLVC
Trigger: GCATACTAAGTGGCAGAAGCACCAGGCATTCATGGC...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTCAGCTCGGCCATGAATaGCTGGTGCTTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAAQLGHE*LVLLPL
Trigger: AAGTGGCAGAAGCACCAGGCATTCATGGCCGAGCTG...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCTCGCGGTGGAACTGGTaGTGCTCGCGAGAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAASRWNW*CSREAC
Trigger: GCAGGCTTCTCGCGAGCAGCACCAGTTCCACCGCGA...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGTGGCACAGCCGGAGGTaGTCCTGCAGGCGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQWHSRR*SCRRSR
Trigger: GCGGGAGCGCCTGCAGGAGCACCTCCGGCTGTGCCA...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGCTCCTGACCGATGGTaGTTGTGTCCCGGGAGAACT +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPAPDRW*LCPGRT
Trigger: AGTTCTCCCGGGACACAAGCACCATCGGTCAGGAGC...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACAGGAGGAGAAGCGGTCTaGCCGGGCCTCTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATGGEAV*PGLYLC
Trigger: GCAGAGATAGAGGCCCGGGCAGACCGCTTCTCCTCC...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCCTTCCCCATGTCGATaGAGGAGGAGAAGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPPSPCR*RRRSGL
Trigger: CAGACCGCTTCTCCTCCTGCATCGACATGGGGAAGG...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACCAACTTCGTCGACCGTaGAACCCAGCTCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYQLRRP*NPAQRC
Trigger: GCAGCGCTGAGCTGGGTTGCACGGTCGACGAAGTTG...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACAAGGCCTCCATCTCCTaGTTGCGGCACAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYKASIS*LRHSIP
Trigger: GGGGATGCTGTGCCGCAAGCAGGAGATGGAGGCCTT...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGACCCTCAATCAGCTCTCTGCCGTCTTTGCTaGGGAGCACAACAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TRSHELISACGWKDPQSALCRLC*GAQQAP
Trigger: AGGGGCCTGTTGTGCTCCGCAGCAAAGACGGCAGAG...AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACCTCTGCCGTCTTTGCTaGGGAGCACAACAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYLCRLC*GAQQAP
Trigger: AGGGGCCTGTTGTGCTCCGCAGCAAAGACGGCAGAG...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCGTTCTCTGCCGTCTTTaGTGCGGAGCACAACAGGCC +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPVLCRL*CGAQQA
Trigger: GGCCTGTTGTGCTCCGCAGCAAAGACGGCAGAGAAC...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGCTCGCTCTCGTTCTCTaGCGTCTTTGCTGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGLALVL*RLCCGA
Trigger: TGCTCCGCAGCAAAGACGGCAGAGAACGAGAGCGAG...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCTCGCTCTCGTTCTCTaGCGTCTTTGCTGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPLALVL*RLCCGA
Trigger: TGCTCCGCAGCAAAGACGGCAGAGAACGAGAGCGAG...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCAAGGCAGAAGGCGAGTaGCCTCGCATGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPKAEGE*PRMAGE
Trigger: TTCTCCTGCCATGCGAGGGCACTCGCCTTCTGCCTT...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCTGGCTGGGTGGCTGCTaGTGTGGACAGCATGGACCT +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVWLGGC*CGQHGP
Trigger: AGGTCCATGCTGTCCACAGCAGCAGCCACCCAGCCA...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTGGCGCTCTGCCTCCATaGCATGGTCCAGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: REAELFNHLLGQTQGGGCGALPP*HGPAPC
Trigger: GCAAGGTGCTGGACCATGCCATGGAGGCAGAGCGCC...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCGACTGCAGCTGGTTCTaGACCCCGCTAAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPDCSWF*TPLREL
Trigger: CAACTCCCTTAGCGGGGTCCAGAACCAGCTGCAGTC...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAGCCCAAAGTTGTCCTaGGACACGAGGCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGSPKLS*DTRRWF
Trigger: GAACCAGCGCCTCGTGTCCCAGGACAACTTTGGGCT...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCAGCTCTGCTCTAGCTTaGCCACCCGCTCCGACACCA +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVSSALA*PPAPTP
Trigger: TGGTGTCGGAGCGGGTGGCCAAGCTAGAGCAGAGCT...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGTCTAGCCGCTCCCACTaGGCTTGGAGTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGSSRSH*AWSSAA
Trigger: TGCAGCTGAACTCCAAGCCCAGTGGGAGCGGCTAGA...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACAGCCAGTGCTTTGGCCTaGGCCTGGATTGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTASALA*AWIAST
Trigger: GGTGGAGGCAATCCAGGCCCAGGCCAAAGCACTGGC...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCTGTGGCAATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTCGAAGTTCCAGCTCGTaGCCCAGGCGTTTCCACATT +
Preference number: 4 (lower is better)
Translates to: AVAMAAFTTRSHELISACRSSSS*PRRFHI
Trigger: AATGTGGAAACGCCTGGGCCACGAGCTGGAACTTCG...ACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCATTGCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGACTCTCTGGGTGCTCGTaGTCAATCATGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRLSGCS*SIMSWL
Trigger: CAGCCAGGACATGATTGACCACGAGCACCCAGAGAG...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGAGCTCGCGGCGGAGCTaGCACAGCCGGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQSSRRS*HSRRCS
Trigger: GGAGCACCTCCGGCTGTGCCAGCTCCGCCGCGAGCT...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACACCGCATAGTGGCTCCTaGCCAGCAGCTCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATPHSGS*PAAPSP
Trigger: TGGGGAAGGAGCTGCTGGCCAGGAGCCACTATGCGG...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCGCCACTGCTGACTTCTaGAAGGCCTCGTGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVATADF*KASCRL
Trigger: CAAGCGGCACGAGGCCTTCCAGAAGTCAGCAGTGGC...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATAGCCCACCAGGTCCCCTaGAGGCACACTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PIIVSLQCPQACQLGVQIAHQVP*RHTGCG
Trigger: CCCACAGCCAGTGTGCCTCCAGGGGACCTGGTGGGC...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CACTGGAGGTCACTGTCAGAGGGAAATGAGACCAGGTCAGGGAAGCTCTCAGTGGGGTTCCGTCCCAGGTaGTGTCAGAAGCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: HWRSLSEGNETRSGKLSVGFRPR*CQKLSG
Trigger: GCCAGACAGCTTCTGACACCACCTGGGACGGAACCC...CACTGAGAGCTTCCCTGACCTGGTCTCATTTCCCTCTGACAGTGACCTCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCTCGGTAGACCTGCTCTaGGGCATTGCAGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVSVDLL*GIADGA
Trigger: GGCCCCATCTGCAATGCCCCAGAGCAGGTCTACCGA...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTGGCAGGGTGGCAGCATaGGCTGACTCGGTAGACCTG +
Preference number: 4 (lower is better)
Translates to: REAELFNHLLGQTQGGGCGRVAA*ADSVDL
Trigger: CAGGTCTACCGAGTCAGCCCATGCTGCCACCCTGCC...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCGCGCTGGCTGCCTTaGCATCCTTGTAAAAGCCGA +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPPRWLP*HPCKSR
Trigger: TCGGCTTTTACAAGGATGCCAAGGCAGCCAGCGCGG...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCGCTCATCTCTGCCTGTaGATGGAAAGACCCTCAATC +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPAHLCL*MERPSI
Trigger: GATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGC...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp CTGTGGATGGAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGGGAGAGGGGGTTACCTaGGTCCCACCACCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LWMERPSISFKDTVLSWPGEGVT*VPPPVW
Trigger: CCAGACTGGTGGTGGGACCCAGGTAACCCCCTCTCC...CGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTCCATCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCGCCATTGAGAGCAGCTaGAGATGGAGTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPAIESS*RWSGSW
Trigger: CCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGC...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGGATGGCATGTGCCTGTaGTTCAGGCTACTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGDGMCL*FRLLGR
Trigger: CCTCCCGAGTAGCCTGAACCACAGGCACATGCCATC...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAACTTCCATCAACATCTaGAGACAAACACTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGETSINI*RQTLCP
Trigger: AGGGCACAGTGTTTGTCTCCAGATGTTGATGGAAGT...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGATCTGGTCTACCGGTTTaGAGCCCACTCTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGSGLPV*SPLWGC
Trigger: ACAGCCCCAGAGTGGGCTCCAAACCGGTAGACCAGA...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CAA 72 bp ACTGTCCCTGGCAGTTTCCTGAACGGAGGGAGGGAGTaGGCCTGGGACCTTGCCCCCAACTACTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: TVPGSFLNGGRE*AWDLAPNYLFF
Trigger: GAAGAACAAGTAGTTGGGGGCAAGGTCCCAGGCCAACTCCCTCCCTCCGTTCAGGAAACTGCCAGGGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGACCAACTGCCGGTCATTaGGGGTCACGATCGTTTGCT +
Preference number: 4 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRPTAGH*GSRSFA
Trigger: AGCAAACGATCGTGACCCTCAATGACCGGCAGTTGG...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACCGGTGCGGTAGGAGTTaGAGGACTGCAGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYRCGRS*RTAAGS
Trigger: AGAACCAGCTGCAGTCCTTCAACTCCTACCGCACCG...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGATGTCATTCACCGCGGTaGTTTGTGCTGCAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRCHSPR*FVLQGC
Trigger: ACACCCTTGCAGCACAAATCACCGCGGTGAATGACA...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCTGCTGCGCTGCGTCTTaGTTCTTCTTGTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPCCAAS*FFLCLL
Trigger: GAGGAGGCACAAGAAGAATCAAGACGCAGCGCAGCA...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCGGGGCTCATGGCCCTaGATCTCTTTCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: REAELFNHLLGQTQGGGCRGSWP*ISFCRV
Trigger: GACCCTGCAGAAAGAGATTCAGGGCCATGAGCCCCG...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp CACTGGAGGTCACTGTCAGAGGGAAATGAGACCAGGTCAGGGAAGCTCTCAGTGCTATCTACGCGCTCCTaGCCGATGGTGCTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: HWRSLSEGNETRSGKLSVLSTRS*PMVLVS
Trigger: GGACACAAGCACCATCGGTCAGGAGCGCGTAGATAG...CACTGAGAGCTTCCCTGACCTGGTCTCATTTCCCTCTGACAGTGACCTCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGCTGAGACAGCTTCTCTaGGATCTCCTCGGCCGCATA +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGLRQLL*DLLGRI
Trigger: TATGCGGCCGAGGAGATCTCAGAGAAGCTGTCTCAG...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCGCCGTGCCTGCAGCTaGGACAGCTTCTCTGAGATC +
Preference number: 4 (lower is better)
Translates to: REAELFNHLLGQTQGGGCRRACS*DSFSEI
Trigger: GATCTCAGAGAAGCTGTCTCAGCTGCAGGCACGGCG...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGCAGTGGACATCCCTGGCAGTTTCCTaGACGGAGGGAGGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ERPSISFKDTVLSWPQWTSLAVS*TEGGSW
Trigger: CCAACTCCCTCCCTCCGTTCAGGAAACTGCCAGGGA...TGTCCACTGCGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp GAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGCAGTGGACACCACATGGCCTATGTTaGGGGTGCGGCACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ERPSISFKDTVLSWPQWTPHGLC*GCGTVH
Trigger: GTGGACAGTGCCGCACCCTCAACATAGGCCATGTGG...TGTCCACTGCGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp CTGTGGATGGAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGGGCCTGCTTCAGCTCTaGGAGGTTCCTGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LWMERPSISFKDTVLSWPGLLQL*EVPGWS
Trigger: AGACCAGCCAGGAACCTCTCAGAGCTGAAGCAGGCC...CGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTCCATCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACAGGCCTGCTTCAGCTCTaGGAGGTTCCTGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTGLLQL*EVPGWS
Trigger: AGACCAGCCAGGAACCTCTCAGAGCTGAAGCAGGCC...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACAGGGCTCCTGCGCCTCTaGCTGTCATCTGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATGLLRL*LSSGTS
Trigger: AGAAGTGCCAGATGACAGTCAGAGGCGCAGGAGCCC...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGACACCCAGAGGCGGTaGGAGAAGCTGAGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPDTQRR*EKLSCL
Trigger: TAAACAGCTCAGCTTCTCTCACCGCCTCTGGGTGTC...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGATCTCAGATCCCTGTCTaGGGTCCCTTGATCTACTGG +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRSQIPV*GPLIYW
Trigger: CCAGTAGATCAAGGGACCTCAGACAGGGATCTGAGA...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCTTAACCAAGGTGAACTaGTGCCTGCTTAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPLTKVN*CLLRRG
Trigger: TCCTCTCCTAAGCAGGCAGCAGTTCACCTTGGTTAA...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp CACTGGAGGTCACTGTCAGAGGGAAATGAGACCAGGTCAGGGAAGCTCTCAGTGAGGGAGTTGGCCAACTaGCGGTCATTGAGGGTCACG +
Preference number: 4 (lower is better)
Translates to: HWRSLSEGNETRSGKLSVRELAN*RSLRVT
Trigger: CGTGACCCTCAATGACCGGCAGTTGGCCAACTCCCT...CACTGAGAGCTTCCCTGACCTGGTCTCATTTCCCTCTGACAGTGACCTCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCGTGCTTCCGTACTGCTaGCTCGACAGCTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAAVLPYC*LDSCQL
Trigger: GAGCTGGCAGCTGTCGAGGCAGCAGTACGGAAGCAC...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAATTCGTGCTTCCGTACTaGTGCCTCGACAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: MAAFTTRSHELISACGWKFVLPY*CLDSCQ
Trigger: CTGGCAGCTGTCGAGGCAGCAGTACGGAAGCACGAA...TTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGTCTCAATGGCTTCGTaGTTCCGTACTGCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPVSMAS*FRTAAS
Trigger: CGAGGCAGCAGTACGGAAGCACGAAGCCATTGAGAC...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACAACCAGCTCGTGCAGCTaGAGCAGGTCCTCCACTCCT +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATTSSCS*SRSSTP
Trigger: AGGAGTGGAGGACCTGCTGCAGCTGCACGAGCTGGT...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CTGTGGATGGAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGCGCTCCGACACCAGCTaGGGGTCGCAAGGTCTATAC +
Preference number: 4 (lower is better)
Translates to: LWMERPSISFKDTVLSWPRSDTS*GSQGLY
Trigger: GTATAGACCTTGCGACCCGCAGCTGGTGTCGGAGCG...CGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTCCATCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGGGAAGTCATCCAAGCTaGGCAAGAAGTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGGSHPS*ARSPAA
Trigger: GGCTGCAGGACTTCTTGCGCAGCTTGGATGACTTCC...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp TCCCCTCTTCTATGTCCTGTTCTTAAGGAATCATGCCCTGAAGTCCTGCTGCCGCCACAGCAGTCTGAGTaGGGCCTAGCCAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SPLLCPVLKESCPEVLLPPQQSE*GLARPG
Trigger: TCCAGGCCTGGCTAGGCCGCACTCAGACTGCTGTGG...CGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGACATAGAAGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGTGTCGGCGTGGATGTTaGCTTCAGATACCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGCRRGC*LQIPAG
Trigger: GCCAGCTGGTATCTGAAGGCAACATCCACGCCGACA...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGCCTCTCAATGGAGTCTaGCTTTTCCCGAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQPLNGV*LFPNLV
Trigger: GACAAGATTCGGGAAAAGGCAGACTCCATTGAGAGG...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGATGCAGGAAATGCTGCTaGTCCCGGTTGTCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRCRKCC*SRLSRR
Trigger: TCTTCGGGACAACCGGGAGCAGCAGCATTTCCTGCA...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGATGCAGGAAATGCTGCTaGTCCCGGTTGTCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGCRKCC*SRLSRR
Trigger: TCTTCGGGACAACCGGGAGCAGCAGCATTTCCTGCA...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCTCTTGCAGGAAATGCTaGTGCTCCCGGTTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPSCRKC*CSRLSR
Trigger: TCGGGACAACCGGGAGCAGCAGCATTTCCTGCAAGA...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCTGTGGCAATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTTTCTGCCACTTAGTATaGAGGTTGCGGGCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: AVAMAAFTTRSHELISACFCHLV*RLRASS
Trigger: TGACGAGGCCCGCAACCTGCATACTAAGTGGCAGAA...ACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCATTGCCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGAAATGCCTGGTGCTTCTaGCACTTAGTATGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGNAWCF*HLVCRL
Trigger: CAACCTGCATACTAAGTGGCAGAAGCACCAGGCATT...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACATCGTCCCAGCGCCTGTaGAGGTCTCTCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTSSQRL*RSLSFS
Trigger: GGAGAAGCTGAGAGACCTGCACAGGCGCTGGGACGA...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCTCGTCCCAGCGCCTGTaGAGGTCTCTCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAASSQRL*RSLSFS
Trigger: GGAGAAGCTGAGAGACCTGCACAGGCGCTGGGACGA...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACAGGCAGGTCCTTGCCATaGTCCATGGAGCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATGRSLP*SMELAM
Trigger: CATGGCCAGCTCCATGGAGCATGGCAAGGACCTGCC...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGACCACGAGCTCATCTCTaGCTGTGGATGGAAAGACCC +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGPRAHL*LWMERP
Trigger: GGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGG...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAGGGTATGATGGCATGTaGCTGTGGTTCAGGCTACTC +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRGYDGM*LWFRLL
Trigger: GAGTAGCCTGAACCACAGGCACATGCCATCATACCC...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGCCTGAAAGCTCCGATTaGCAAACCAGAGACAAAGGA +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQPESSD*QTRDKG
Trigger: TCCTTTGTCTCTGGTTTGGCAATCGGAGCTTTCAGG...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGAGGCCACCAAGGAGTaGCCACTTCCATCAACATCT +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAAEATKE*PLPSTS
Trigger: AGATGTTGATGGAAGTGGGCACTCCTTGGTGGCCTC...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGACAGTGCCCCCAGGCTTaGCAGCTTGGAGTGCAAATA +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGQCPQA*QLGVQI
Trigger: TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTG...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTTCTGCCTCCATGGCATaGTCCAGCACCTTGCCAATT +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAASASMA*SSTLPI
Trigger: AATTGGCAAGGTGCTGGACCATGCCATGGAGGCAGA...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGACGCTCCCACTGGGCTTaGAGTTCAGCTGCACGGGCA +
Preference number: 4 (lower is better)
Translates to: IVSLQCPQACQLGVQIPRRSHWA*SSAARA
Trigger: TGCCCGTGCAGCTGAACTCCAAGCCCAGTGGGAGCG...TCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACACAAGGCGTCCAGGGTTaGCCGGTGGCTTCGAATCTC +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTQGVQG*PVASNL
Trigger: GAGATTCGAAGCCACCGGCCAACCCTGGACGCCTTG...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCAACTGCTGCCACCTGTaGTTGAGCTGCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVNCCHL*LSCSWV
Trigger: CACCCAGGAGCAGCTCAACCACAGGTGGCAGCAGTT...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGTCCCGCAGGAATCCCTaGAAGCCGTGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQSRRNP*KPWAWA
Trigger: GGCCCAGGCCCACGGCTTCCAGGGATTCCTGCGGGA...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCGTTCCCGCATGGGCTaGCACAAGGCCCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: REAELFNHLLGQTQGGGCRSRMG*HKALNF
Trigger: GAAGTTCAGGGCCTTGTGCCAGCCCATGCGGGAACG...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACAACATCGCGGTGGAACTaGTGCTGCTCGCGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATTSRWN*CCSREA
Trigger: GGCTTCTCGCGAGCAGCACCAGTTCCACCGCGATGT...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCTCTCTGGGTGCTCGTaGTCAATCATGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPLSGCS*SIMSWL
Trigger: CAGCCAGGACATGATTGACCACGAGCACCCAGAGAG...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCTTGTCCACCTGGGCTTaGCGGATGGATATCCGAGTG +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPLSTWA*RMDIRV
Trigger: CACTCGGATATCCATCCGCCAAGCCCAGGTGGACAA...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCTGCTTGTGTGGATGGTaGTGGCCGTGGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAACLCGW*WPWLGS
Trigger: GGAACCCAGCCACGGCCACCACCATCCACACAAGCA...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGAGTGACACTGGGGGCATaGTCATGGCCCGGGTCATGC +
Preference number: 4 (lower is better)
Translates to: IVSLQCPQACQLGVQIPRVTLGA*SWPGSC
Trigger: GCATGACCCGGGCCATGACCATGCCCCCAGTGTCAC...TCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGCAGCTGGAAGCTTCTaGAATGGCACGGACAGAGAG +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGAAGSF*NGTDRE
Trigger: CTCTCTGTCCGTGCCATTCCAGAAGCTTCCAGCTGC...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAAGGGGAGTCTGCAGCTaGAAGCTTCTGGAATGGCAC +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGRGVCS*KLLEWH
Trigger: GTGCCATTCCAGAAGCTTCCAGCTGCAGACTCCCCT...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACACAGCCACTCCCCACATaGCCTATGTTGAGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTQPLPT*PMLRVR
Trigger: CCGCACCCTCAACATAGGCCATGTGGGGAGTGGCTG...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACAGCGAGTGCCCTCGCATaGCAGGAGAATGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATASALA*QENDPE
Trigger: CTCAGGGTCATTCTCCTGCCATGCGAGGGCACTCGC...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGACACGCTTTTCCTGTTaGAGGCCACCAAGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGTRFSC*RPPRSA
Trigger: GGCACTCCTTGGTGGCCTCCAACAGGAAAAGCGTGT...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CAA 72 bp ATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTaGACCTTGGCAACAGACCCTAGCAGCAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: MDSSPVTVPGDG*TLATDPSSRQL
Trigger: CAACTGCCTGCTGCTAGGGTCTGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.6
ENST00000529997.5
ENST00000533211.6
ENST00000617502.4
CDS-3UTR TCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTAGCAGGGCCAGCCCGTTaGGCCACTGCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLAGPAR*ATAPSP
Trigger: AGGAGAAGGAGCAGTGGCTCAACGGGCTGGCCCTGC...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGTGTCATTCACCGCGGTaGTTTGTGCTGCAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGCHSPR*FVLQGC
Trigger: ACACCCTTGCAGCACAAATCACCGCGGTGAATGACA...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CTGTGGATGGAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGGCTGCTCCTGGGTGTTaGCAATGCGGTCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LWMERPSISFKDTVLSWPAAPGC*QCGLCL
Trigger: CAGGCAAAGACCGCATTGTCAACACCCAGGAGCAGC...CGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTCCATCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACACTGGCTTCTCAAGGGTaGGCTCTCGCCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTLASQG*ALALPC
Trigger: ACAAGGAAGGGCGAGAGCTCACCCTTGAGAAGCCAG...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCATCCATCTGCAGGTTaGCCTCATCCATCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPHPSAG*PHPSRA
Trigger: TGCTCTGGATGGATGAGGTCAACCTGCAGATGGATG...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGACCTGTAAGCCCAGCTTaGAGACATGTTTGCGCTTTC +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRPVSPA*RHVCAF
Trigger: GAAAGCGCAAACATGTCTTCAAGCTGGGCTTACAGG...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CTGTGGATGGAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGTGGACTCGTCCCCAGTaGCAGTTCCTGGTGATGGGT +
Preference number: 4 (lower is better)
Translates to: LWMERPSISFKDTVLSWPWTRPQ*QFLVMG
Trigger: ACCCATCACCAGGAACTGTCACTGGGGACGAGTCCA...CGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTCCATCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACATGGACTCGTCCCCAGTaGCAGTTCCTGGTGATGGGT +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATWTRPQ*QFLVMG
Trigger: ACCCATCACCAGGAACTGTCACTGGGGACGAGTCCA...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp CACTGGAGGTCACTGTCAGAGGGAAATGAGACCAGGTCAGGGAAGCTCTCAGTGACTCGGTCTTCGTCATaGCTGATGATAGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: HWRSLSEGNETRSGKLSVTRSSS*LMIGPQ
Trigger: CTGCGGGCCTATCATCAGTCATGACGAAGACCGAGT...CACTGAGAGCTTCCCTGACCTGGTCTCATTTCCCTCTGACAGTGACCTCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAAGCACCCCCAAGGTATaGCTGTCTCTTCAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGSTPKV*LSLQWR
Trigger: TCTCCACTGAAGAGACAGTCATACCTTGGGGGTGCT...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTACTCTTTCCCTGGGTTaGAGAAGCGCAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: REAELFNHLLGQTQGGGCTLSLG*RSAGQR
Trigger: CCTCTGCCCTGCGCTTCTGCAACCCAGGGAAAGAGT...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGACCCTCAATCAGCTGGCCTCCATGTCGTTTaGATCGGCCTGGAACTGGTA +
Preference number: 4 (lower is better)
Translates to: TRSHELISACGWKDPQSAGLHVV*IGLELV
Trigger: TACCAGTTCCAGGCCGATGCAAACGACATGGAGGCC...AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp GCCGCATATGCAGATGCTGCTCGGGGTCTTCAGTCTCACCTCTCCGTTGACAATGGCCTCCATGTCGTTTaGATCGGCCTGGAACTGGTA +
Preference number: 4 (lower is better)
Translates to: AAYADAARGLQSHLSVDNGLHVV*IGLELV
Trigger: TACCAGTTCCAGGCCGATGCAAACGACATGGAGGCC...ATTGTCAACGGAGAGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp TCCCCTCTTCTATGTCCTGTTCTTAAGGAATCATGCCCTGAAGTCCTGCTGCCGAGCCCGTTGAGCCACTaGTCCTTCTCCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: SPLLCPVLKESCPEVLLPSPLSH*SFSSTQ
Trigger: CTGGGTGGAGGAGAAGGAGCAGTGGCTCAACGGGCT...CGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGACATAGAAGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACAAGACGCCGAAACTGCTaGCACCTGTGGTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATRRRNC*HLWLSC
Trigger: GCAGCTCAACCACAGGTGGCAGCAGTTTCGGCGTCT...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp TCCCCTCTTCTATGTCCTGTTCTTAAGGAATCATGCCCTGAAGTCCTGCTGCCGGGCAGCCAGGGCATTTaGCTCTCGAGTCAGTTCGCC +
Preference number: 4 (lower is better)
Translates to: SPLLCPVLKESCPEVLLPGSQGI*LSSQFA
Trigger: GGCGAACTGACTCGAGAGGCAAATGCCCTGGCTGCC...CGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGACATAGAAGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGTTCTGCCACTTAGTATaGAGGTTGCGGGCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGFCHLV*RLRASS
Trigger: TGACGAGGCCCGCAACCTGCATACTAAGTGGCAGAA...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCCGCATATGCAGATGCTGCTCGGGGTCTTCAGTCTCACCTCTCCGTTGACAATCAGCTCGGCCATGAATaGCTGGTGCTTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: AAYADAARGLQSHLSVDNQLGHE*LVLLPL
Trigger: AAGTGGCAGAAGCACCAGGCATTCATGGCCGAGCTG...ATTGTCAACGGAGAGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGAGGCCTGGGCCTGGATTaGCTCCACCTCCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: IVSLQCPQACQLGVQIPRGLGLD*LHLLLS
Trigger: AGAGAGAAGGAGGTGGAGGCAATCCAGGCCCAGGCC...TCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACGTGCTTCTTCACCTCTaGCTGGGCACTCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYVLLHL*LGTQLI
Trigger: GATGAGCTGAGTGCCCAGGCAGAGGTGAAGAAGCAC...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGAGCTGCTGCTGCTTGTaGTGCACCCGCGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQSCCCL*CTRARA
Trigger: AGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCT...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGATCCATTAACACTGGGTaGTTGTGTGGATGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRSINTG*LCGWWW
Trigger: CCACCACCATCCACACAAGCACCCAGTGTTAATGGA...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GCCGCATATGCAGATGCTGCTCGGGGTCTTCAGTCTCACCTCTCCGTTGACAATGCCCTTCGGGGAAGCTaGTGTGCTCAAGTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: AAYADAARGLQSHLSVDNALRGS*CAQVSV
Trigger: AACAGAGACTTGAGCACAGCAGCTTCCCCGAAGGGC...ATTGTCAACGGAGAGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTATCATGCCCCGGGTGGTaGTGGGCACCACCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLSCPGW*WAPPAL
Trigger: AAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGA...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGATCATGGCCCGGGTCATaGCCCGGGTGGTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGSWPGS*PGWCWA
Trigger: TGCCCAGCACCACCCGGGGCATGACCCGGGCCATGA...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGATCTGCCCCCAGGGCCTaGTTCAGCTCTGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: IVSLQCPQACQLGVQIPRSAPRA*FSSERF
Trigger: GAACCTCTCAGAGCTGAAGCAGGCCCTGGGGGCAGA...TCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGGGGAAATTATCCTaGAGGCTCTCTGGTCTACCG +
Preference number: 4 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRRGKLS*RLSGLP
Trigger: CGGTAGACCAGAGAGCCTGCAGGATAATTTCCCCCT...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCAGCTGTCAAAGTCTGTaGGTGACAGCGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPSCQSL*VTACCS
Trigger: TGAGCAGCACGCTGTCACCCACAGACTTTGACAGCT...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GCTGTGGCAATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTGACTTCTCATCTGGCTaGTCCACATTCACGTCTTCG +
Preference number: 4 (lower is better)
Translates to: AVAMAAFTTRSHELISACDFSSG*STFTSS
Trigger: CGAAGACGTGAATGTGGACCAGCCAGATGAGAAGTC...ACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCATTGCCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTAGCCAGGTCTCCCGCATaGCAGCCTTGCGGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLARSPA*QPCGRS
Trigger: GCTTCGACCGCAAGGCTGCCATGCGGGAGACCTGGC...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACAAGCCTGGAGTGTCCCTaGCATCTCCGTGTGAGACAG +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATSLECP*HLRVRQ
Trigger: CTGTCTCACACGGAGATGCCAGGGACACTCCAGGCT...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGGCCTCCAGGAGCCCGTaGATCCGTTCCCCATTGGCG +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQASRSP*IRSPLA
Trigger: CGCCAATGGGGAACGGATCCACGGGCTCCTGGAGGC...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGACGAATCTTGTCGGCGTaGATGTTGCCTTCAGATACC +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRRILSA*MLPSDT
Trigger: GGTATCTGAAGGCAACATCCACGCCGACAAGATTCG...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACCAGGGCTTTCAGCTCTaGCTTCTCAAGGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYQGFQL*LLKGEL
Trigger: GAGCTCACCCTTGAGAAGCCAGAGCTGAAAGCCCTG...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATAAGAGGCTGCGGGCCTTaGCTTGGGTGGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PIIVSLQCPQACQLGVQIRGCGP*LGWWSP
Trigger: TGGAGACCACCACCCAAGCCAAGGCCCGCAGCCTCT...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACGCCAGTGCTTTGGCCTaGGCCTGGATTGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: VDNACPYCRTASIGCPIYASALA*AWIAST
Trigger: GGTGGAGGCAATCCAGGCCCAGGCCAAAGCACTGGC...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCACTCAGCTCATCCTTaGCCTTCTCCTGGCCCATCA +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVHSAHP*PSPGPS
Trigger: TGATGGGCCAGGAGAAGGCCAAGGATGAGCTGAGTG...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAAGACGCTGTGGCAATaGCTGCATTCACCACCCGTA +
Preference number: 4 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRKTLWQ*LHSPPV
Trigger: TACGGGTGGTGAATGCAGCCATTGCCACAGCGTCTT...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCCTGTCGACTGTCCCTaGCAGTTTCCTGAACGGAGG +
Preference number: 4 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAAPVDCP*QFPERR
Trigger: CCTCCGTTCAGGAAACTGCCAGGGACAGTCGACAGG...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCAGAGGGGAAGCCACCTaGGAAGCCTTTGTCCCTATT +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPRGEAT*EAFVPI
Trigger: AATAGGGACAAAGGCTTCCCAGGTGGCTTCCCCTCT...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACAGAGAGGACACAGGCTTaGGCAGAGAGGCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTERTQA*AERLWS
Trigger: TGACCACAGCCTCTCTGCCCAAGCCTGTGTCCTCTC...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGATCCACCTGTTGGCTGTaGAACAGTAAATCTACCCAT +
Preference number: 4 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGSTCWL*NSKSTH
Trigger: ATGGGTAGATTTACTGTTCCACAGCCAACAGGTGGA...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGTATGCACGATGGCGTTaGAAGCTAGTCCATCTCTCC +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGYARWR*KLVHLS
Trigger: GGAGAGATGGACTAGCTTTCAACGCCATCGTGCATA...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTGCCGCATGGTGGCCCTaGGGTCCTCCCAGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVAAWWP*GPPSRS
Trigger: AGACCGGCTGGGAGGACCTCAGGGCCACCATGCGGC...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTAAGCACGCCCTCAGCCTaGCGAGCATCCCGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLSTPSA*RASRRN
Trigger: ATTCCTGCGGGATGCTCGTCAGGCTGAGGGCGTGCT...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCAGAGCTTCAGCTCGTaGCAATCTTGCAGGAAATGC +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPQSFSS*QSCRKC
Trigger: GCATTTCCTGCAAGATTGTCACGAGCTGAAGCTCTG...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp ATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAACCTCCAAAACCAGCTaGAGCCAGTCCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: MAAFTTRSHELISACGWKTSKTS*SQSIFS
Trigger: GGAGAAGATGGACTGGCTTCAGCTGGTTTTGGAGGT...TTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGACTGTCCACACCGTGGTaGGGGACAGAGGCACGAGGC +
Preference number: 4 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGLSTPW*GTEARG
Trigger: GCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAG...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATAGGCTGGTCTGAGGGGTaGGGAACCAGAAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PIIVSLQCPQACQLGVQIGWSEG*GTRRQK
Trigger: CTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCC...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACGTGCTTCCGTACTGCTaGCTCGACAGCTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VDNACPYCRTASIGCPIYVLPYC*LDSCQL
Trigger: GAGCTGGCAGCTGTCGAGGCAGCAGTACGGAAGCAC...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp CTGTGGATGGAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGGGAAGTCATCCAAGCTaGGCAAGAAGTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LWMERPSISFKDTVLSWPGSHPS*ARSPAA
Trigger: GGCTGCAGGACTTCTTGCGCAGCTTGGATGACTTCC...CGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTCCATCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp GAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGCAGTGGACATCTTGCAGGAAATGCTaGTGCTCCCGGTTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: ERPSISFKDTVLSWPQWTSCRKC*CSRLSR
Trigger: TCGGGACAACCGGGAGCAGCAGCATTTCCTGCAAGA...TGTCCACTGCGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp GTTGATCAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTCGGTGGAACTGGTGCTaGTCGCGAGAAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VDQFIGTCHFSDPCLRSLRWNWC*SREACR
Trigger: CCTGCAGGCTTCTCGCGAGCAGCACCAGTTCCACCG...AAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTGATCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACACGAGTGCTCTCTGGGTaGTCGTGGTCAATCATGTCC +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATRVLSG*SWSIMS
Trigger: GGACATGATTGACCACGAGCACCCAGAGAGCACTCG...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTCCGTGCAGGAAGCGCTaGAGCTCGTACGCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVPCRKR*SSYAAA
Trigger: GGCCGCGGCGTACGAGCTGCAGCGCTTCCTGCACGG...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCGGCCTCTGCCATCCCTaGATCTCTTCCAAACACAAG +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVGLCHP*ISSKHK
Trigger: CTTGTGTTTGGAAGAGATGCAGGGATGGCAGAGGCC...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACAACACAGTACACGTTCTaGCAGGACCTGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTTQYTF*QDLLAA
Trigger: GGCTGCCAACAGGTCCTGGCAGAACGTGTACTGTGT...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CTGTGGATGGAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGGCAGAAGAGAAGGGCTaGCCTTGGGAACATGGACTC +
Preference number: 4 (lower is better)
Translates to: LWMERPSISFKDTVLSWPAEEKG*PWEHGL
Trigger: GAGTCCATGTTCCCAAGGGCAGCCCTTCTCTTCTGC...CGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTCCATCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAAAGAAGGGGAGTCTaGAGCTGGAAGCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPERRGV*SWKLLE
Trigger: TTCCAGAAGCTTCCAGCTGCAGACTCCCCTTCTTTC...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCGCAATGGGCTGTGATTaGGCCACTGCAGTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAAAMGCD*ATAVQL
Trigger: AAGCTGGACTGCAGTGGCGCAATCACAGCCCATTGC...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp TCCCCTCTTCTATGTCCTGTTCTTAAGGAATCATGCCCTGAAGTCCTGCTGCCGGCCCTGAAGTCCTGCTaGCGCATATGCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: SPLLCPVLKESCPEVLLPALKSC*RICRCC
Trigger: GCAGCATCTGCATATGCGGCAGCAGGACTTCAGGGC...CGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGACATAGAAGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTTTGATGTCACTGTACTaGCCCTGGATTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAALMSLY*PWISKL
Trigger: CAGCTTGGAAATCCAGGGCCAGTACAGTGACATCAA...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGATCGGCCACCAACTGCTaGCCCTGCTCCAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGSATNC*PCSRVS
Trigger: GCTCACCCTGGAGCAGGGCCAGCAGTTGGTGGCCGA...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACGACAGAACATATTCCTaGCTGCTGAGCACGCCCTCA +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYDRTYS*LLSTPS
Trigger: TGAGGGCGTGCTCAGCAGCCAGGAATATGTTCTGTC...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACGCAGCATCAGCAGCCTaGAGTGTCCCTGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: VDNACPYCRTASIGCPIYAASAA*SVPGIS
Trigger: GGAGATGCCAGGGACACTCCAGGCTGCTGATGCTGC...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGCCTTCAGATACCAGCTaGCGGCCAGCCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQPSDTS*RPASRS
Trigger: GCTCCTGGAGGCTGGCCGCCAGCTGGTATCTGAAGG...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCTGTGCCTCCTCTCAATaGAGTCTGCCTTTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPCASSQ*SLPFPE
Trigger: TTCGGGAAAAGGCAGACTCCATTGAGAGGAGGCACA...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGAACAGCTCAGCTCGGTTaGCATCAAAGAGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: IVSLQCPQACQLGVQIPRTAQLG*HQRGCG
Trigger: CCCGCAGCCTCTTTGATGCCAACCGAGCTGAGCTGT...TCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GTTGATCAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTCCTGGGCCAGTGCTTTaGCCTGGGCCTGGATTGCCT +
Preference number: 4 (lower is better)
Translates to: VDQFIGTCHFSDPCLRSLPGPVL*PGPGLP
Trigger: AGGCAATCCAGGCCCAGGCCAAAGCACTGGCCCAGG...AAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTGATCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCTCCTTGGCCTTCTCCTaGCCCATCATGTGTAATTCC +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPSLAFS*PIMCNS
Trigger: GGAATTACACATGATGGGCCAGGAGAAGGCCAAGGA...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATATCGGTAGACCTGCTCTaGGGCATTGCAGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: PIIVSLQCPQACQLGVQISVDLL*GIADGA
Trigger: GGCCCCATCTGCAATGCCCCAGAGCAGGTCTACCGA...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTCTGACTGTCATCTaGCACTTCTGCCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PIIVSLQCPQACQLGVQIPLTVI*HFCPQG
Trigger: GCCCTGGGGGCAGAAGTGCCAGATGACAGTCAGAGG...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACACAGCTGGAGATGGAGTaGCAGCTGGAGTTACAGGGT +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTQLEME*QLELQG
Trigger: ACCCTGTAACTCCAGCTGCCACTCCATCTCCAGCTG...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGAGCCAGAGGCTGCGGTTaGCTGCTCAGTGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: IVSLQCPQACQLGVQIPRARGCG*LLSGNQ
Trigger: CTGATTTCCACTGAGCAGCCAACCGCAGCCTCTGGC...TCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCGGCTCTTCAAGAGCTTaGAGGCTGGGGAAACGTGAG +
Preference number: 4 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAAGSSRA*RLGKRE
Trigger: CTCACGTTTCCCCAGCCTCCAAGCTCTTGAAGAGCC...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTGTCAACCCAGCACACTaGAGGTCACTGTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: REAELFNHLLGQTQGGGCVNPAH*RSLSEG
Trigger: TCCCTCTGACAGTGACCTCCAGTGTGCTGGGTTGAC...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CAA 72 bp TTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTaGGAGTGCAAATACCTAGATTCCCTGAGCACCCCC +
Preference number: 4 (lower is better)
Translates to: LLFPFSAPRLAS*ECKYLDSLSTP
Trigger: GGGGGTGCTCAGGGAATCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp ATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGAGTCAAAGTCTGTGGGTaGCAGCGTGCTGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: IVSLQCPQACQLGVQIPRVKVCG*QRAAHG
Trigger: ACCATGAGCAGCACGCTGTCACCCACAGACTTTGAC...TCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCTATGCACGATGGCGTTaGAAGCTAGTCCATCTCTCC +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVYARWR*KLVHLS
Trigger: GGAGAGATGGACTAGCTTTCAACGCCATCGTGCATA...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGAGCAGGCAGTTGTCCTaGCAAGAGGGCGGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQSRQLS*QEGGPC
Trigger: ACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCT...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGTCCAAGTGCACTTTCTaGTCCTTGAGGAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGSKCTF*SLRNCS
Trigger: ACTGCAGTTCCTCAAGGAGCAGAAAGTGCACTTGGA...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGACCCTCAATCAGCTTCTGGCCGGTGTTTATaGACGATGGCGTTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: TRSHELISACGWKDPQSASGRCL*TMALKA
Trigger: AGCTTTCAACGCCATCGTGCATAAACACCGGCCAGA...AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATATTCGTGCTTCCGTACTaGTGCCTCGACAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PIIVSLQCPQACQLGVQIFVLPY*CLDSCQ
Trigger: CTGGCAGCTGTCGAGGCAGCAGTACGGAAGCACGAA...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACCACCGCGGTGATTTGTaGTGCAAGGGTGTTCATTTC +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYHRGDL*CKGVHF
Trigger: GAAATGAACACCCTTGCAGCACAAATCACCGCGGTG...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCACCGCGGTGATTTGTaGTGCAAGGGTGTTCATTTC +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVHRGDL*CKGVHF
Trigger: GAAATGAACACCCTTGCAGCACAAATCACCGCGGTG...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGGCCAGACGCCGAAACTaGTGCCACCTGTGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQARRRN*CHLWLS
Trigger: GCTCAACCACAGGTGGCAGCAGTTTCGGCGTCTGGC...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GTTGATCAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGGCAGGTCCTTGCCATaGTCCATGGAGCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: VDQFIGTCHFSDPCLRSLGRSLP*SMELAM
Trigger: CATGGCCAGCTCCATGGAGCATGGCAAGGACCTGCC...AAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTGATCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGCAATCATGTCCTGGCTaGTGGCCGCCAGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQQSCPG*WPPAGG
Trigger: TCCACCAGCTGGCGGCCAGCAGCCAGGACATGATTG...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp TCCCCTCTTCTATGTCCTGTTCTTAAGGAATCATGCCCTGAAGTCCTGCTGCCGACACAGTACACGTTCTaGCAGGACCTGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SPLLCPVLKESCPEVLLPTQYTF*QDLLAA
Trigger: GGCTGCCAACAGGTCCTGGCAGAACGTGTACTGTGT...CGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGACATAGAAGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACGTTCTCTGCCGTCTTTaGTGCGGAGCACAACAGGCC +
Preference number: 4 (lower is better)
Translates to: VDNACPYCRTASIGCPIYVLCRL*CGAQQA
Trigger: GGCCTGTTGTGCTCCGCAGCAAAGACGGCAGAGAAC...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGATGCCGCATATGCAGATaGTGCTCGGGGTCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: IVSLQCPQACQLGVQIPRCRICR*CSGSSV
Trigger: GACTGAAGACCCCGAGCAGCATCTGCATATGCGGCA...TCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGACATGCCCTGAAGTCCTaGTGCCGCATATGCAGATGC +
Preference number: 4 (lower is better)
Translates to: IVSLQCPQACQLGVQIPRHALKS*CRICRC
Trigger: GCATCTGCATATGCGGCAGCAGGACTTCAGGGCATG...TCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGATCACTGTACTGGCCCTaGATTTCCAAGCTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGSLYWP*ISKLSK
Trigger: CTTTGACAGCTTGGAAATCCAGGGCCAGTACAGTGA...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGATCCACACTGATGTCTTaGATCTGGAATCGAAGGATG +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRSTLMS*IWNRRM
Trigger: CATCCTTCGATTCCAGATCCAAGACATCAGTGTGGA...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTAAGCTCTGCTCTAGCTTaGCCACCCGCTCCGACACCA +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLSSALA*PPAPTP
Trigger: TGGTGTCGGAGCGGGTGGCCAAGCTAGAGCAGAGCT...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GTTGATCAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTTCCAGGGTTGGCCGGTaGCTTCGAATCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VDQFIGTCHFSDPCLRSLSRVGR*LRISSS
Trigger: GGAGGAGGAGATTCGAAGCCACCGGCCAACCCTGGA...AAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTGATCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CTGTGGATGGAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGTGGTTGAGCTGCTCCTaGGTGTTGACAATGCGGTCT +
Preference number: 4 (lower is better)
Translates to: LWMERPSISFKDTVLSWPWLSCS*VLTMRS
Trigger: AGACCGCATTGTCAACACCCAGGAGCAGCTCAACCA...CGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTCCATCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACAGACAGAACATATTCCTaGCTGCTGAGCACGCCCTCA +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATDRTYS*LLSTPS
Trigger: TGAGGGCGTGCTCAGCAGCCAGGAATATGTTCTGTC...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGACCCTCAATCAGCTCGAATCTTGTCGGCGTaGATGTTGCCTTCAGATACC +
Preference number: 4 (lower is better)
Translates to: TRSHELISACGWKDPQSARILSA*MLPSDT
Trigger: GGTATCTGAAGGCAACATCCACGCCGACAAGATTCG...AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp ACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGACCCTCAATCAGCTTCGGCCATGAATGCCTaGTGCTTCTGCCACTTAGTA +
Preference number: 4 (lower is better)
Translates to: TRSHELISACGWKDPQSASAMNA*CFCHLV
Trigger: TACTAAGTGGCAGAAGCACCAGGCATTCATGGCCGA...AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACTCTTCCACATCGCGGTaGAACTGGTGCTGCTCGCGA +
Preference number: 4 (lower is better)
Translates to: VDNACPYCRTASIGCPIYSSTSR*NWCCSR
Trigger: TCGCGAGCAGCACCAGTTCCACCGCGATGTGGAAGA...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTGCCTTCTGGAGCCGGTaGCCGTCGTCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVAFWSR*PSSCTC
Trigger: GCAGGTGCAGGACGACGGCCACCGGCTCCAGAAGGC...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGCCTTGATGCCTTGCTaGTTCTTGATGACTAGATCC +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPALMPC*FLMTRS
Trigger: GGATCTAGTCATCAAGAACCAGCAAGGCATCAAGGC...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTATTGTGTGGATGGTGGTaGCCGTGGCTGGGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLLCGWW*PWLGSV
Trigger: GACGGAACCCAGCCACGGCCACCACCATCCACACAA...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GTTGATCAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTTGCTTGTGTGGATGGTaGTGGCCGTGGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: VDQFIGTCHFSDPCLRSLCLCGW*WPWLGS
Trigger: GGAACCCAGCCACGGCCACCACCATCCACACAAGCA...AAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTGATCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGATGGCACTCCCGCGCTaGCTGCCTTGGCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQMALPR*LPWHPC
Trigger: ACAAGGATGCCAAGGCAGCCAGCGCGGGAGTGCCAT...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGCTCACCTCATCCTTaGCCTGGAATAAATATTCTT +
Preference number: 4 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQSSPHP*PGINIL
Trigger: AAGAATATTTATTCCAGGCCAAGGATGAGGTGAGCT...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTAGCGAGTGCCCTCGCATaGCAGGAGAATGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLASALA*QENDPE
Trigger: CTCAGGGTCATTCTCCTGCCATGCGAGGGCACTCGC...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCATCTCCATGGCACAGTaGAGATTCGTCTTCTACAGA +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPISMAQ*RFVFYR
Trigger: TCTGTAGAAGACGAATCTTCACTGTGCCATGGAGAT...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACCTTCTGTCTCCACACTaGTGTCTTGGATCTGGAATC +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYLLSPH*CLGSGI
Trigger: GATTCCAGATCCAAGACATCAGTGTGGAGACAGAAG...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GTTGATCAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGCTGCTCCTGGGTGTTaGCAATGCGGTCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: VDQFIGTCHFSDPCLRSLAAPGC*QCGLCL
Trigger: CAGGCAAAGACCGCATTGTCAACACCCAGGAGCAGC...AAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTGATCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCTCTGGTTTTTCTTCATaGGAAGCTGGACGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAASGFSS*EAGRWA
Trigger: TGCCCAGCGTCCAGCTTCTCATGAAGAAAAACCAGA...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACATCTGGTTTTTCTTCATaGGAAGCTGGACGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATSGFSS*EAGRWA
Trigger: TGCCCAGCGTCCAGCTTCTCATGAAGAAAAACCAGA...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACGTTCCCGGACAGCCTTaGAGAAGCGGAACTTGTCTG +
Preference number: 4 (lower is better)
Translates to: VDNACPYCRTASIGCPIYVPGQP*RSGTCL
Trigger: CAGACAAGTTCCGCTTCTTCAAGGCTGTCCGGGAAC...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGACCACATGGCCTATGTTaGGGGTGCGGCACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGPHGLC*GCGTVH
Trigger: GTGGACAGTGCCGCACCCTCAACATAGGCCATGTGG...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACTGTCTGAGGTCCCTTaGTCTACTGGAGAGCAGACG +
Preference number: 4 (lower is better)
Translates to: PIIVSLQCPQACQLGVQILSEVP*STGEQT
Trigger: CGTCTGCTCTCCAGTAGATCAAGGGACCTCAGACAG...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTAGACTTAGTCGGGTATaGTGGCATGTGCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: REAELFNHLLGQTQGGGCRLSRV*WHVPVV
Trigger: AACCACAGGCACATGCCATCATACCCGACTAAGTCT...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCATGGTCCAGCACCTTaGCAATTCTCTTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAAHGPAP*QFSCLP
Trigger: TGGAAGGCAAGAGAATTGGCAAGGTGCTGGACCATG...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCAGAAATTGCTGCGCTaGGTCTTGATTCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: KLSCLITSLARLKAVAVPQKLLR*VLILLV
Trigger: CACAAGAAGAATCAAGACGCAGCGCAGCAATTTCTG...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAACATTCCAGCATCTGCTaGTTCTTGAGCAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: MAAFTTRSHELISACGWKHSSIC*FLSRML
Trigger: CAACATCCTGCTCAAGAAGCAGCAGATGCTGGAATG...TTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR GCA 90 bp GTGAAGAAAATTGTGCACCAGGGAAGGAGTCCCTCATTGCTTTTTAACATGAATCCGTCGTCCTGCACCTaGTGGACCTGGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VKKIVHQGRSPSLLFNMNPSSCT*WTWGLR
Trigger: CCTCAGCCCCCAGGTCCAGCAGGTGCAGGACGACGG...ATTCATGTTAAAAAGCAATGAGGGACTCCTTCCCTGGTGCACAATTTTCTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTTCCATTAACACTGGGTaGTTGTGTGGATGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: REAELFNHLLGQTQGGGCSINTG*LCGWWW
Trigger: CCACCACCATCCACACAAGCACCCAGTGTTAATGGA...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTAATCAAAGGCGACGCTaGCCTGGGCCCTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVNQRRR*PGPWPG
Trigger: GCCTGGCCAGGGCCCAGGGCAGCGTCGCCTTTGATT...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCTTGATGTCACTGTACTaGCCCTGGATTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVLMSLY*PWISKL
Trigger: CAGCTTGGAAATCCAGGGCCAGTACAGTGACATCAA...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGTCTAGCCGCTCCCACTaGGCTTGGAGTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQSSRSH*AWSSAA
Trigger: TGCAGCTGAACTCCAAGCCCAGTGGGAGCGGCTAGA...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGATTCTTCATGAGAAGCTaGACGCTGGGCAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: IVSLQCPQACQLGVQIPRFFMRS*TLGRSL
Trigger: CAAGGACCTGCCCAGCGTCCAGCTTCTCATGAAGAA...TCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTACCTGGGCTTGGCGGATaGATATCCGAGTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLPGLGG*ISECSL
Trigger: CAGAGAGCACTCGGATATCCATCCGCCAAGCCCAGG...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GTGAAGAAAATTGTGCACCAGGGAAGGAGTCCCTCATTGCTTTTTAACATGAATAAGGCGACGCTGCCCTaGGCCCTGGCCAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: VKKIVHQGRSPSLLFNMNKATLP*ALARLT
Trigger: TGTCAGCCTGGCCAGGGCCCAGGGCAGCGTCGCCTT...ATTCATGTTAAAAAGCAATGAGGGACTCCTTCCCTGGTGCACAATTTTCTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGATCCTGCAGGCTCTCTaGTCTACCGGTTTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQILQAL*STGLEP
Trigger: GGGCTCCAAACCGGTAGACCAGAGAGCCTGCAGGAT...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTCTGTCTCCACACTaGTGTCTTGGATCTGGAATC +
Preference number: 4 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAALLSPH*CLGSGI
Trigger: GATTCCAGATCCAAGACATCAGTGTGGAGACAGAAG...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR TCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGACGGTGCGGTAGGAGTTaGAGGACTGCAGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGRCGRS*RTAAGS
Trigger: AGAACCAGCTGCAGTCCTTCAACTCCTACCGCACCG...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GTGAAGAAAATTGTGCACCAGGGAAGGAGTCCCTCATTGCTTTTTAACATGAATGAGCGGCGATGCGCTTaGTGTCGTGGTAGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: VKKIVHQGRSPSLLFNMNERRCA*CRGSAR
Trigger: CCGAGCGCTACCACGACATCAAGCGCATCGCCGCTC...ATTCATGTTAAAAAGCAATGAGGGACTCCTTCCCTGGTGCACAATTTTCTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAGTGACTTCATTCTGTTaGTCAGTTTATTGGAACCTG +
Preference number: 4 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRVTSFC*SVYWNL
Trigger: CAGGTTCCAATAAACTGATCAACAGAATGAAGTCAC...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GCCGCATATGCAGATGCTGCTCGGGGTCTTCAGTCTCACCTCTCCGTTGACAATCTTCTACAGATCAGATaGTCCAAACAGGCATCTCAG +
Preference number: 4 (lower is better)
Translates to: AAYADAARGLQSHLSVDNLLQIR*SKQASQ
Trigger: CTGAGATGCCTGTTTGGAGCATCTGATCTGTAGAAG...ATTGTCAACGGAGAGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GTGAAGAAAATTGTGCACCAGGGAAGGAGTCCCTCATTGCTTTTTAACATGAATTCCTCCAGGGCCCGATaGTGCCTGGCTAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VKKIVHQGRSPSLLFNMNSSRAR*CLARAC
Trigger: GCAGGCTCTAGCCAGGCAGCATCGGGCCCTGGAGGA...ATTCATGTTAAAAAGCAATGAGGGACTCCTTCCCTGGTGCACAATTTTCTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GTTGATCAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGGATGGATATCCGAGTaGTCTCTGGGTGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: VDQFIGTCHFSDPCLRSLGWISE*SLGARG
Trigger: ACCACGAGCACCCAGAGAGCACTCGGATATCCATCC...AAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTGATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGACCTTCCCCATGTCGATaGAGGAGGAGAAGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGPSPCR*RRRSGL
Trigger: CAGACCGCTTCTCCTCCTGCATCGACATGGGGAAGG...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTATCGGGGAAGCTGCTGTaGTCAAGTCTCTGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLSGKLL*SSLCCP
Trigger: GGGACAACAGAGACTTGAGCACAGCAGCTTCCCCGA...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTAGCAGAAGAGAAGGGCTaGCCTTGGGAACATGGACTC +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLAEEKG*PWEHGL
Trigger: GAGTCCATGTTCCCAAGGGCAGCCCTTCTCTTCTGC...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTTCACTGTACTGGCCCTaGATTTCCAAGCTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: REAELFNHLLGQTQGGGCSLYWP*ISKLSK
Trigger: CTTTGACAGCTTGGAAATCCAGGGCCAGTACAGTGA...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACTCCACACTGATGTCTTaGATCTGGAATCGAAGGATG +
Preference number: 4 (lower is better)
Translates to: THLEAIESSWRWSGSWSYSTLMS*IWNRRM
Trigger: CATCCTTCGATTCCAGATCCAAGACATCAGTGTGGA...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CCA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGATCTCTGCCTCATCCTTaGCCTGGAATAAATATTCTT +
Preference number: 4 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRSLPHP*PGINIL
Trigger: AAGAATATTTATTCCAGGCCAAGGATGAGGCAGAGA...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CTGTGGATGGAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGATCTCTGCCTGTGGATaGAAAGACCCTCAATCAGCT +
Preference number: 4 (lower is better)
Translates to: LWMERPSISFKDTVLSWPISACG*KDPQSA
Trigger: AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGAT...CGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTCCATCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTATCAGCTTTCCACCACTaGGCTGAGCAGTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLSAFHH*AEQWLR
Trigger: TCTCAGCCACTGCTCAGCCCAGTGGTGGAAAGCTGA...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGAATGGGGCTGCCTTCCTaGAAAAACGGTTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: IVSLQCPQACQLGVQIPRMGLPS*KNGCLC
Trigger: ACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCAT...TCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGCCTGGCATCTCCGTGTaGGACAGAACATATTCCTGG +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQPGISV*DRTYSW
Trigger: CCAGGAATATGTTCTGTCTCACACGGAGATGCCAGG...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GTGAAGAAAATTGTGCACCAGGGAAGGAGTCCCTCATTGCTTTTTAACATGAATGCTGGACCTGGGGGCTaGGGGCCTGAATGTCATGCT +
Preference number: 4 (lower is better)
Translates to: VKKIVHQGRSPSLLFNMNAGPGG*GPECHA
Trigger: AGCATGACATTCAGGCCCTCAGCCCCCAGGTCCAGC...ATTCATGTTAAAAAGCAATGAGGGACTCCTTCCCTGGTGCACAATTTTCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGACTGAGACAGCTTCTCTaGGATCTCCTCGGCCGCATA +
Preference number: 4 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGLRQLL*DLLGRI
Trigger: TATGCGGCCGAGGAGATCTCAGAGAAGCTGTCTCAG...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCAGGCAGAAAGTGAGCTaGCTGTTTCATGCTATTAGG +
Preference number: 4 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAARQKVS*LFHAIR
Trigger: CCTAATAGCATGAAACAGTCAGCTCACTTTCTGCCT...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR TCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGAGTTTGAGGCCAAGGTaGGAGAATCACTTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQSLRPR*ENHLGP
Trigger: TGGGCCCAAGTGATTCTCTCACCTTGGCCTCAAACT...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTCCCACTCTGGGGCTGTaGTGTGCTAGTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVPTLGL*CASSGP
Trigger: AGGCCCAGAACTAGCACATCACAGCCCCAGAGTGGG...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTAGGCCTCTGCCATCCCTaGATCTCTTCCAAACACAAG +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLGLCHP*ISSKHK
Trigger: CTTGTGTTTGGAAGAGATGCAGGGATGGCAGAGGCC...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGAATGCCTGCCCCTACTaGAGGACTGCTTCAATTGGC +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQNACPY*RTASIG
Trigger: GCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATT...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGATCCGTTGACAATGCCTaGCCCTACTGCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGSVDNA*PYCRTA
Trigger: AGCAGTCCTGCAGTAGGGGCAGGCATTGTCAACGGA...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp TCCCCTCTTCTATGTCCTGTTCTTAAGGAATCATGCCCTGAAGTCCTGCTGCCGTTGTTAGCGTCTGAGTaGTCTAAGGTCCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SPLLCPVLKESCPEVLLPLLASE*SKVQGP
Trigger: AGGACCTTGGACCTTAGACCACTCAGACGCTAACAA...CGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGACATAGAAGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTAAGCTGTCAAAGTCTGTaGGTGACAGCGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLSCQSL*VTACCS
Trigger: TGAGCAGCACGCTGTCACCCACAGACTTTGACAGCT...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTACGATGTCCGTCTCAATaGCTTCGTGCTTCCGTACTG +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLRCPSQ*LRASVL
Trigger: CAGTACGGAAGCACGAAGCCATTGAGACGGACATCG...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATATGTGCCTCCTCTCAATaGAGTCTGCCTTTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: PIIVSLQCPQACQLGVQICASSQ*SLPFPE
Trigger: TTCGGGAAAAGGCAGACTCCATTGAGAGGAGGCACA...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGATTGTCCACCTGGGCTTaGCGGATGGATATCCGAGTG +
Preference number: 4 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGLSTWA*RMDIRV
Trigger: CACTCGGATATCCATCCGCCAAGCCCAGGTGGACAA...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGTACAGCTTGTCCACCTaGGCTTGGCGGATGGATATC +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQYSLST*AWRMDI
Trigger: GATATCCATCCGCCAAGCCCAGGTGGACAAGCTGTA...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GTGAAGAAAATTGTGCACCAGGGAAGGAGTCCCTCATTGCTTTTTAACATGAATTCCCGGGGACGCTCCTaGGCATCCATCTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: VKKIVHQGRSPSLLFNMNSRGRS*ASICRL
Trigger: CAACCTGCAGATGGATGCCCAGGAGCGTCCCCGGGA...ATTCATGTTAAAAAGCAATGAGGGACTCCTTCCCTGGTGCACAATTTTCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGACATGCCACTACACCTaGCTAATTTTTGTAGAGATG +
Preference number: 4 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGTCHYT*LIFVEM
Trigger: CATCTCTACAAAAATTAGCCAGGTGTAGTGGCATGT...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GTTGATCAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTCAGAGCTTCAGCTCGTaGCAATCTTGCAGGAAATGC +
Preference number: 4 (lower is better)
Translates to: VDQFIGTCHFSDPCLRSLQSFSS*QSCRKC
Trigger: GCATTTCCTGCAAGATTGTCACGAGCTGAAGCTCTG...AAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTGATCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GTGAAGAAAATTGTGCACCAGGGAAGGAGTCCCTCATTGCTTTTTAACATGAATTCCCTGGCAGTTTCCTaGACGGAGGGAGGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: VKKIVHQGRSPSLLFNMNSLAVS*TEGGSW
Trigger: CCAACTCCCTCCCTCCGTTCAGGAAACTGCCAGGGA...ATTCATGTTAAAAAGCAATGAGGGACTCCTTCCCTGGTGCACAATTTTCTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGATGGGGAAACGTGAGATaGAGGAGACCAGAACGGAAG +
Preference number: 4 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGWGNVR*RRPERK
Trigger: CTTCCGTTCTGGTCTCCTTCATCTCACGTTTCCCCA...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp GCCGCATATGCAGATGCTGCTCGGGGTCTTCAGTCTCACCTCTCCGTTGACAATGTGTATAGGAAACAATaGAAGAACACGCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: AAYADAARGLQSHLSVDNVYRKQ*KNTLFL
Trigger: CAGGAAAAGCGTGTTCTTTCATTGTTTCCTATACAC...ATTGTCAACGGAGAGGTGAGACTGAAGACCCCGAGCAGCATCTGCATATGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GTTGATCAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTTCTGGCCGGTGTTTATaGACGATGGCGTTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: VDQFIGTCHFSDPCLRSLSGRCL*TMALKA
Trigger: AGCTTTCAACGCCATCGTGCATAAACACCGGCCAGA...AAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTGATCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCTTCAGCCAGATTGAATaGATTCTGCAGATTATAGTG +
Preference number: 4 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPFSQIE*ILQIIV
Trigger: CACTATAATCTGCAGAATGCATTCAATCTGGCTGAA...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTCCTTGCCAATTCTCTTaGCTTCCACGGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVPCQFS*LPRPGP
Trigger: AGGCCCTGGCCGTGGAAGGCAAGAGAATTGGCAAGG...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTACATGGTCCAGCACCTTaGCAATTCTCTTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLHGPAP*QFSCLP
Trigger: TGGAAGGCAAGAGAATTGGCAAGGTGCTGGACCATG...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGAATTGTTTCCCTTCAGTaGCCCCAGGCTTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGIVSLQ*PQACQL
Trigger: AAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGACGCATATGCAGATGCTaGTCGGGGTCTTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGRICRC*SGSSVS
Trigger: TGAGACTGAAGACCCCGAGCAGCATCTGCATATGCG...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGTCGGCCATGAATGCCTaGTGCTTCTGCCACTTAGTA +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQSAMNA*CFCHLV
Trigger: TACTAAGTGGCAGAAGCACCAGGCATTCATGGCCGA...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTATATCCGAGTGCTCTCTaGGTGCTCGTGGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLYPSAL*VLVVNH
Trigger: ATGATTGACCACGAGCACCCAGAGAGCACTCGGATA...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACGCCTTGATGCCTTGCTaGTTCTTGATGACTAGATCC +
Preference number: 4 (lower is better)
Translates to: VDNACPYCRTASIGCPIYALMPC*FLMTRS
Trigger: GGATCTAGTCATCAAGAACCAGCAAGGCATCAAGGC...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTTCTGCCAGGACCTGTTaGCAGCCTTCTTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVSARTC*QPSSRR
Trigger: CCTTCGGGAAGAAGGCTGCCAACAGGTCCTGGCAGA...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTGCCATTGAGAGCAGCTaGAGATGGAGTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVAIESS*RWSGSW
Trigger: CCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGC...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATAGGCTTCCCAAAGTGCTaGGATTATAAGCGTGAACCA +
Preference number: 4 (lower is better)
Translates to: PIIVSLQCPQACQLGVQIGFPKC*DYKREP
Trigger: TGGTTCACGCTTATAATCCCAGCACTTTGGGAAGCC...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTGGGAAGCTCTCAGTGTaGCACGGCTCTTCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVGKLSV*HGSSRA
Trigger: AGCTCTTGAAGAGCCGTGTCACACTGAGAGCTTCCC...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTAGCCATCTCTCTCCATTaGTTTGTGCTGCCTGCATTT +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLAISLH*FVLPAF
Trigger: AAATGCAGGCAGCACAAATCAATGGAGAGAGATGGC...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTAGGTGTTTCAGAGTCATaGCACACTTGGTTTGGCTAC +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLGVSES*HTWFGY
Trigger: GTAGCCAAACCAAGTGTGTCATGACTCTGAAACACC...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCTGCAGATTATAGTGTaGATTACACTTCTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: EKLSCLITSLARLKAVAVLQIIV*ITLLQR
Trigger: TCTCTGAAGAAGTGTAATGCACACTATAATCTGCAG...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACAGTGTGTATATTTACATaGTTGGGCTGTAAAGTCACC +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATVCIFT*LGCKVT
Trigger: GGTGACTTTACAGCCCAAGCATGTAAATATACACAC...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGACCCCTACTGCAGGACTaGTTCAATTGGCTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGPLLQD*FNWLSY
Trigger: ATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGG...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGGCTCACTGTAACCTCTaGTTCCCAGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQAHCNL*FPGSSN
Trigger: ATTGCTTGAACCTGGGAAGCAGAGGTTACAGTGAGC...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GTGAAGAAAATTGTGCACCAGGGAAGGAGTCCCTCATTGCTTTTTAACATGAATGCTTGCTCCAGCACCTaGTGCTTCTTCACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VKKIVHQGRSPSLLFNMNACSST*CFFTSA
Trigger: GGCAGAGGTGAAGAAGCACCAGGTGCTGGAGCAAGC...ATTCATGTTAAAAAGCAATGAGGGACTCCTTCCCTGGTGCACAATTTTCTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGAAAAGAGGCTTGGCATTaGTCAACCCAGCACACTGGA +
Preference number: 4 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGKEAWH*STQHTG
Trigger: TCCAGTGTGCTGGGTTGACCAATGCCAAGCCTCTTT...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGATGAATACTGCTTGTTaGCATCATCCCAACCCATGG +
Preference number: 4 (lower is better)
Translates to: TRDKGEATRSFLILHQIQMNTAC*HHPNPW
Trigger: CCATGGGTTGGGATGATGTCAACAAGCAGTATTCAT...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACACTGCAGATTATAGTGTaGATTACACTTCTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATLQIIV*ITLLQR
Trigger: TCTCTGAAGAAGTGTAATGCACACTATAATCTGCAG...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACATTCAGCCAGATTGAATaGATTCTGCAGATTATAGTG +
Preference number: 4 (lower is better)
Translates to: PTTSLELNSRREGLPLGTFSQIE*ILQIIV
Trigger: CACTATAATCTGCAGAATGCATTCAATCTGGCTGAA...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR GCA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTACAGAAATTGCTGCGCTaGGTCTTGATTCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLQKLLR*VLILLV
Trigger: CACAAGAAGAATCAAGACGCAGCGCAGCAATTTCTG...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGACCCAGAACATCTCCATaGCACAGTGAAGATTCGTCT +
Preference number: 4 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGPRTSP*HSEDSS
Trigger: AGACGAATCTTCACTGTGCCATGGAGATGTTCTGGG...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GTGAAGAAAATTGTGCACCAGGGAAGGAGTCCCTCATTGCTTTTTAACATGAATCAGGGCTTTCAGCTCTaGCTTCTCAAGGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VKKIVHQGRSPSLLFNMNQGFQL*LLKGEL
Trigger: GAGCTCACCCTTGAGAAGCCAGAGCTGAAAGCCCTG...ATTCATGTTAAAAAGCAATGAGGGACTCCTTCCCTGGTGCACAATTTTCTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GTGAAGAAAATTGTGCACCAGGGAAGGAGTCCCTCATTGCTTTTTAACATGAATCAGCTGGAGATGGAGTaGCAGCTGGAGTTACAGGGT +
Preference number: 4 (lower is better)
Translates to: VKKIVHQGRSPSLLFNMNQLEME*QLELQG
Trigger: ACCCTGTAACTCCAGCTGCCACTCCATCTCCAGCTG...ATTCATGTTAAAAAGCAATGAGGGACTCCTTCCCTGGTGCACAATTTTCTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp GTGAAGAAAATTGTGCACCAGGGAAGGAGTCCCTCATTGCTTTTTAACATGAATAGGTGGAGGTTGCAATaGGCTGTGATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: VKKIVHQGRSPSLLFNMNRWRLQ*AVIAPL
Trigger: CAGTGGCGCAATCACAGCCCATTGCAACCTCCACCT...ATTCATGTTAAAAAGCAATGAGGGACTCCTTCCCTGGTGCACAATTTTCTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGACAGGACTGCTTCAATTaGCTGTCCTATTTACACTTA +
Preference number: 4 (lower is better)
Translates to: IVSLQCPQACQLGVQIPRQDCFN*LSYLHL
Trigger: TAAGTGTAAATAGGACAGCCAATTGAAGCAGTCCTG...TCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CAA 72 bp ATGCTTCATACCTGGTGTTTCAGAGTCATGACACACTaGGTTTGGCTACATCTCAGTAGCCACACATGGCTG +
Preference number: 4 (lower is better)
Translates to: MLHTWCFRVMTH*VWLHLSSHTWL
Trigger: CAGCCATGTGTGGCTACTGAGATGTAGCCAAACCAAGTGTGTCATGACTCTGAAACACCAGGTATGAAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CAA 72 bp AGTCACCTCATGGCTTCCCAGAGTGACTTCATTCTGTaGATCAGTTTATTGGAACCTGCCACTTCTCAGATC +
Preference number: 4 (lower is better)
Translates to: SHLMASQSDFIL*ISLLEPATSQI
Trigger: GATCTGAGAAGTGGCAGGTTCCAATAAACTGATCAACAGAATGAAGTCACTCTGGGAAGCCATGAGGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
3UTR CAA 72 bp TTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATaGGCTGTCCTATTTACACTTACGTGTCGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: LTMPAPTAGLLQ*AVLFTLTCRVK
Trigger: TTTAACACGACACGTAAGTGTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR GCA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTCATTCCAGCATCTGCTaGTTCTTGAGCAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVHSSIC*FLSRML
Trigger: CAACATCCTGCTCAAGAAGCAGCAGATGCTGGAATG...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTTGTAAAGTCACCTCATaGCTTCCCAGAGTGACTTCA +
Preference number: 4 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVCKVTS*LPRVTS
Trigger: TGAAGTCACTCTGGGAAGCCATGAGGTGACTTTACA...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR TCA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTTTCCACTTAGTCCCATaGCAGATTGTTCTAGTTACG +
Preference number: 4 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVFHLVP*QIVLVT
Trigger: CGTAACTAGAACAATCTGTCATGGGACTAAGTGGAA...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CCA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGAGTATATTTACATGCTTaGGCTGTAAAGTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGVYLHA*AVKSPH
Trigger: ATGAGGTGACTTTACAGCCCAAGCATGTAAATATAC...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS CCA 90 bp CTCGCGGGCTCTTCCCCGCCCCGAACCTCCCACCTGCGGGCCCACTaGCACCCGCGGCGCTCAGAGGCTCTAGGTGGCTCCCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: LAGSSPPRTSHLRAH*HPRRSEALGGSRRR
Trigger: CCGCCGCCGGGAGCCACCTAGAGCCTCTGAGCGCCGCGGGTGCCAGTGGGCCCGCAGGTGGGAGGTTCGGGGCGGGGAAGAGCCCGCGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611817.5
CDS GCA 90 bp TCCACAGGCCCCGGCCTCGCTGAGCATGGTGTAGAGCGCCAGGGCTaGCTCCAAGGCCCGCGCTCGCTCGCCTGCCCGGGCCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: STGPGLAEHGVERQG*LQGPRSLACPGLQL
Trigger: GAGCTGCAGGCCCGGGCAGGCGAGCGAGCGCGGGCCTTGGAGGCAGCCCTGGCGCTCTACACCATGCTCAGCGAGGCCGGGGCCTGTGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp GCCTCGGCAGCGTTGAGGTCGCGGCCAGTCCCGTCCGGAAGCTGCTaGTGCTTGTGCTGCACCCGCGCCAGGGCTTGGCGTGCCCCGTGC +
Preference number: 5 (lower is better)
Translates to: ASAALRSRPVPSGSC*CLCCTRARAWRAPC
Trigger: GCACGGGGCACGCCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGACGGGACTGGCCGCGACCTCAACGCTGCCGAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp AGGGCCTCGGCAGCGTTGAGGTCGCGGCCAGTCCCGTCCGGAAGCTaGTGCTGCTTGTGCTGCACCCGCGCCAGGGCTTGGCGTGCCCCG +
Preference number: 5 (lower is better)
Translates to: RASAALRSRPVPSGS*CCLCCTRARAWRAP
Trigger: CGGGGCACGCCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGACGGGACTGGCCGCGACCTCAACGCTGCCGAGGCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp CCGTCCGGAAGCTGCTGCTGCTTGTGCTGCACCCGCGCCAGGGCTTaGCGTGCCCCGTGCAGGAAGCGCTGCAGCTCGTACGCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: PSGSCCCLCCTRARA*RAPCRKRCSSYAAA
Trigger: GGCCGCGGCGTACGAGCTGCAGCGCTTCCTGCACGGGGCACGCCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGACGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp CCGGCTATACTCGCTCTGGGCCCGCTCCACCTCTCCCCGCAGGGCTaGATGTTGGGCCAGGAGGGCCTCTGCCTCAGGCAGGGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: PAILALGPLHLSPQG*MLGQEGLCLRQGGR
Trigger: CCGGCCACCCTGCCTGAGGCAGAGGCCCTCCTGGCCCAACATGCAGCCCTGCGGGGAGAGGTGGAGCGGGCCCAGAGCGAGTATAGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp AGGTCATCCAGCTCGCGGCGGAGCTGGCACAGCCGGAGGTGCTCCTaGAGGCGCTCCCGCCGCTCTCCAGCCAGCTCCTTCAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: RSSSSRRSWHSRRCS*RRSRRSPASSFRPA
Trigger: TGCCGGCCTGAAGGAGCTGGCTGGAGAGCGGCGGGAGCGCCTGCAGGAGCACCTCCGGCTGTGCCAGCTCCGCCGCGAGCTGGATGACCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp CGGAAGCTGCTGCTGCTTGTGCTGCACCCGCGCCAGGGCTTGGCGTaGCCCGTGCAGGAAGCGCTGCAGCTCGTACGCCGCGGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: RKLLLLVLHPRQGLA*PVQEALQLVRRGQH
Trigger: GTGCTGGCCGCGGCGTACGAGCTGCAGCGCTTCCTGCACGGGGCACGCCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCTTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp GCGTTGAGGTCGCGGCCAGTCCCGTCCGGAAGCTGCTGCTGCTTGTaGTGCACCCGCGCCAGGGCTTGGCGTGCCCCGTGCAGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: ALRSRPVPSGSCCCL*CTRARAWRAPCRKR
Trigger: GCGCTTCCTGCACGGGGCACGCCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGACGGGACTGGCCGCGACCTCAACGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp TCGGCAGCGTTGAGGTCGCGGCCAGTCCCGTCCGGAAGCTGCTGCTaGTTGTGCTGCACCCGCGCCAGGGCTTGGCGTGCCCCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: SAALRSRPVPSGSCC*LCCTRARAWRAPCR
Trigger: CCTGCACGGGGCACGCCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGACGGGACTGGCCGCGACCTCAACGCTGCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp CCAGGGTGGGCACCCGGCTCTGCACCTCGGGCGTGCGGCTCAGTGTaGGGGGCAGGGCTGCTGCCTGTTCCCTCAAGGCGTCCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: PGWAPGSAPRACGSV*GAGLLPVPSRRPGL
Trigger: CAACCCTGGACGCCTTGAGGGAACAGGCAGCAGCCCTGCCCCCCACACTGAGCCGCACGCCCGAGGTGCAGAGCCGGGTGCCCACCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 90 bp GGCCTCAGCTTCACCCACCTCCCAGAGGAAACGCCAGAGCCGCCGTaGTTCCTCCAGCCGGGCCCGCCGCGCCGCTGCCAACTCGCACAG +
Preference number: 5 (lower is better)
Translates to: GLSFTHLPEETPEPP*FLQPGPPRRCQLAQ
Trigger: CTGTGCGAGTTGGCAGCGGCGCGGCGGGCCCGGCTGGAGGAATCACGGCGGCTCTGGCGTTTCCTCTGGGAGGTGGGTGAAGCTGAGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp TTGAGGTCGCGGCCAGTCCCGTCCGGAAGCTGCTGCTGCTTGTGCTaGACCCGCGCCAGGGCTTGGCGTGCCCCGTGCAGGAAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: LRSRPVPSGSCCCLC*TRARAWRAPCRKRC
Trigger: GCAGCGCTTCCTGCACGGGGCACGCCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGACGGGACTGGCCGCGACCTCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp CGAGGCGGCAGGGTGGCAGCATGGGCTGACTCGGTAGACCTGCTCTaGGGCATTGCAGATGGGGCCGGGCCCCGAGTCCGGGTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: RGGRVAAWADSVDLL*GIADGAGPRVRVCL
Trigger: GAGGCAGACCCGGACTCGGGGCCCGGCCCCATCTGCAATGCCCCAGAGCAGGTCTACCGAGTCAGCCCATGCTGCCACCCTGCCGCCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 90 bp GGCAGATGGCTCTGGGCCTCGAGGCGGCAGGGTGGCAGCATGGGCTaGCTCGGTAGACCTGCTCTGGGGCATTGCAGATGGGGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: GRWLWASRRQGGSMG*LGRPALGHCRWGRA
Trigger: GGCCCGGCCCCATCTGCAATGCCCCAGAGCAGGTCTACCGAGTCAGCCCATGCTGCCACCCTGCCGCCTCGAGGCCCAGAGCCATCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp AGCTCCAGGTTGAGGAGGAGCCGCTCCCGCCGGGCGGCCACCATCTaGCGCAAGAAGTCCCAGAGCCGTGCCACGTTGTGCTGCCGAGCG +
Preference number: 5 (lower is better)
Translates to: SSRLRRSRSRRAATI*RKKSQSRATLCCRA
Trigger: CGCTCGGCAGCACAACGTGGCACGGCTCTGGGACTTCTTGCGGCAGATGGTGGCCGCCCGGCGGGAGCGGCTCCTCCTCAACCTGGAGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp AGAGGCGCTGACGGCCCGCACCCTCTCGGCCTGCACGGCGATGTCTaGCTCCACCAGCTCGTGCAGCTGCAGCAGGTCCTCCACTCCTGC +
Preference number: 5 (lower is better)
Translates to: RGADGPHPLGLHGDV*LHQLVQLQQVLHSC
Trigger: GCAGGAGTGGAGGACCTGCTGCAGCTGCACGAGCTGGTGGAGGCAGACATCGCCGTGCAGGCCGAGAGGGTGCGGGCCGTCAGCGCCTCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp TGTTCCAGGTCATCCAGCTCGCGGCGGAGCTGGCACAGCCGGAGGTaGTCCTGCAGGCGCTCCCGCCGCTCTCCAGCCAGCTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: CSRSSSSRRSWHSRR*SCRRSRRSPASSFR
Trigger: CCTGAAGGAGCTGGCTGGAGAGCGGCGGGAGCGCCTGCAGGAGCACCTCCGGCTGTGCCAGCTCCGCCGCGAGCTGGATGACCTGGAACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp CAGCCAGTTCCCAGGGCCTCCAGTCGCTGTCGTAGGAAGAGGCACTaGGGGTCAGCCTGGTCCCGGGTCACCTCCTCGCCCAGGGCTCGC +
Preference number: 5 (lower is better)
Translates to: QPVPRASSRCRRKRH*GSAWSRVTSSPRAR
Trigger: GCGAGCCCTGGGCGAGGAGGTGACCCGGGACCAGGCTGACCCCCAGTGCCTCTTCCTACGACAGCGACTGGAGGCCCTGGGAACTGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp CGCTCCTGGATCCACTGTTCCAGGTCATCCAGCTCGCGGCGGAGCTaGCACAGCCGGAGGTGCTCCTGCAGGCGCTCCCGCCGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: RSWIHCSRSSSSRRS*HSRRCSCRRSRRSP
Trigger: TGGAGAGCGGCGGGAGCGCCTGCAGGAGCACCTCCGGCTGTGCCAGCTCCGCCGCGAGCTGGATGACCTGGAACAGTGGATCCAGGAGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp AAGCTGTCTGGCCGCCCACCAGGTCCCCTGGAGGCACACTGGCTGTaGGTTCGGGAGCAGGCGGCTGTTTCCGCCGCTCCTCCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: KLSGRPPGPLEAHWL*VREQAAVSAAPPPP
Trigger: GGGAGGAGGAGGAGCGGCGGAAACAGCCGCCTGCTCCCGAACCCACAGCCAGTGTGCCTCCAGGGGACCTGGTGGGCGGCCAGACAGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000532650.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 90 bp CCTGCAGGCGCCGGCAGCGTTCCCGCATGGGCTGGCACAAGGCCCTaGACTTCTCCTCCACGGCCCTCGAGGTTCTCTCCACCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: PAGAGSVPAWAGTRP*TSPPRPSRFSPPPL
Trigger: CAGGGGAGGTGGAGAGAACCTCGAGGGCCGTGGAGGAGAAGTTCAGGGCCTTGTGCCAGCCCATGCGGGAACGCTGCCGGCGCCTGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp CGCACCCTCTCGGCCTGCACGGCGATGTCTGCCTCCACCAGCTCGTaGAGCTGCAGCAGGTCCTCCACTCCTGCTAGGTGCCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RTLSACTAMSASTSS*SCSRSSTPARCLPR
Trigger: CCTGGGCAGGCACCTAGCAGGAGTGGAGGACCTGCTGCAGCTGCACGAGCTGGTGGAGGCAGACATCGCCGTGCAGGCCGAGAGGGTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp GTTGATGGCCACTGCCTGAGCGGGATGGCCGGCAGCCAGGGCATTTaGCTCTCGAGTCAGTTCGCCCACCCGGGCGGCGATGGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: VDGHCLSGMAGSQGI*LSSQFAHPGGDGLQ
Trigger: CTGGAGGCCATCGCCGCCCGGGTGGGCGAACTGACTCGAGAGGCAAATGCCCTGGCTGCCGGCCATCCCGCTCAGGCAGTGGCCATCAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp AGGGCCTCCAGTCGCTGTCGTAGGAAGAGGCACTGGGGGTCAGCCTaGTCCCGGGTCACCTCCTCGCCCAGGGCTCGCAGCCGGCTATAC +
Preference number: 5 (lower is better)
Translates to: RASSRCRRKRHWGSA*SRVTSSPRARSRLY
Trigger: GTATAGCCGGCTGCGAGCCCTGGGCGAGGAGGTGACCCGGGACCAGGCTGACCCCCAGTGCCTCTTCCTACGACAGCGACTGGAGGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS-3UTR CAA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAACCGCAGGGCTGCATGTaGGGCCAGGAGGGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKPQGCM*GQEGLC
Trigger: GCAGAGGCCCTCCTGGCCCAACATGCAGCCCTGCGG...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCCCATTGGCCAGCGCATaGGCGCTATCTACGCGCTCC +
Preference number: 5 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTPLASA*ALSTRS
Trigger: GGAGCGCGTAGATAGCGCCAATGCGCTGGCCAATGG...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS TCA 90 bp CATGCTCGTAGGCACAGTGTCGGCGCTGCAGGGCCTCGGCAGCGTTaGGGTCGCGGCCAGTCCCGTCCGGAAGCTGCTGCTGCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: HARRHSVGAAGPRQR*GRGQSRPEAAAACA
Trigger: AGCACAAGCAGCAGCAGCTTCCGGACGGGACTGGCCGCGACCTCAACGCTGCCGAGGCCCTGCAGCGCCGACACTGTGCCTACGAGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp AGGGCCCGATGCTGCCTGGCTAGAGCCTGCGTGGAGAACTCGTCGTaGCCCAGCTCGGGGCTGGACACCAGGCGCAGTGCGTCAACCAAC +
Preference number: 5 (lower is better)
Translates to: RARCCLARACVENSS*PSSGLDTRRSASTN
Trigger: GTTGGTTGACGCACTGCGCCTGGTGTCCAGCCCCGAGCTGGGGCACGACGAGTTCTCCACGCAGGCTCTAGCCAGGCAGCATCGGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp CTCCCAGCCGGTCTGCACCTCTCTCAGCCGGGCGTTGATGGCCACTaGCTGAGCGGGATGGCCGGCAGCCAGGGCATTTGCCTCTCGAGT +
Preference number: 5 (lower is better)
Translates to: LPAGLHLSQPGVDGH*LSGMAGSQGICLSS
Trigger: ACTCGAGAGGCAAATGCCCTGGCTGCCGGCCATCCCGCTCAGGCAGTGGCCATCAACGCCCGGCTGAGAGAGGTGCAGACCGGCTGGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp GAATCTCCTCCTCCAGGGCCCGATGCTGCCTGGCTAGAGCCTGCGTaGAGAACTCGTCGTGCCCCAGCTCGGGGCTGGACACCAGGCGCA +
Preference number: 5 (lower is better)
Translates to: ESPPPGPDAAWLEPA*RTRRAPARGWTPGA
Trigger: TGCGCCTGGTGTCCAGCCCCGAGCTGGGGCACGACGAGTTCTCCACGCAGGCTCTAGCCAGGCAGCATCGGGCCCTGGAGGAGGAGATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp TTGGCCGGTGGCTTCGAATCTCCTCCTCCAGGGCCCGATGCTGCCTaGCTAGAGCCTGCGTGGAGAACTCGTCGTGCCCCAGCTCGGGGC +
Preference number: 5 (lower is better)
Translates to: LAGGFESPPPGPDAA*LEPAWRTRRAPARG
Trigger: GCCCCGAGCTGGGGCACGACGAGTTCTCCACGCAGGCTCTAGCCAGGCAGCATCGGGCCCTGGAGGAGGAGATTCGAAGCCACCGGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp TGCTCGCGAGAAGCCTGCAGGCGCCGGCAGCGTTCCCGCATGGGCTaGCACAAGGCCCTGAACTTCTCCTCCACGGCCCTCGAGGTTCTC +
Preference number: 5 (lower is better)
Translates to: CSREACRRRQRSRMG*HKALNFSSTALEVL
Trigger: GAGAACCTCGAGGGCCGTGGAGGAGAAGTTCAGGGCCTTGTGCCAGCCCATGCGGGAACGCTGCCGGCGCCTGCAGGCTTCTCGCGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp TGTCAGAAGCTGTCTGGCCGCCCACCAGGTCCCCTGGAGGCACACTaGCTGTGGGTTCGGGAGCAGGCGGCTGTTTCCGCCGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: CQKLSGRPPGPLEAH*LWVREQAAVSAAPP
Trigger: AGGAGGAGCGGCGGAAACAGCCGCCTGCTCCCGAACCCACAGCCAGTGTGCCTCCAGGGGACCTGGTGGGCGGCCAGACAGCTTCTGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000532650.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp GTCCCAGGTGGTGTCAGAAGCTGTCTGGCCGCCCACCAGGTCCCCTaGAGGCACACTGGCTGTGGGTTCGGGAGCAGGCGGCTGTTTCCG +
Preference number: 5 (lower is better)
Translates to: VPGGVRSCLAAHQVP*RHTGCGFGSRRLFP
Trigger: CGGAAACAGCCGCCTGCTCCCGAACCCACAGCCAGTGTGCCTCCAGGGGACCTGGTGGGCGGCCAGACAGCTTCTGACACCACCTGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000532650.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS-3UTR CAA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGATCCCGCATGGCAGCCTaGCGGTCGAAGCGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGSRMAA*RSKRAA
Trigger: GGCCGCCCGCTTCGACCGCAAGGCTGCCATGCGGGA...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGGGGCAGAGGCCTGGCTaGCCCCAGGGTGACCCTCGG +
Preference number: 5 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQGQRPG*PQGDPR
Trigger: CCGAGGGTCACCCTGGGGCAAGCCAGGCCTCTGCCC...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAACGGAGGGAGGGAGTaGGCCTGGGACCTTGCCCCC +
Preference number: 5 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGENGGRE*AWDLAP
Trigger: GGGGGCAAGGTCCCAGGCCAACTCCCTCCCTCCGTT...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS TCA 90 bp CAGCCGGTCTGCACCTCTCTCAGCCGGGCGTTGATGGCCACTGCCTaGGCGGGATGGCCGGCAGCCAGGGCATTTGCCTCTCGAGTCAGT +
Preference number: 5 (lower is better)
Translates to: QPVCTSLSRALMATA*AGWPAARAFASRVS
Trigger: ACTGACTCGAGAGGCAAATGCCCTGGCTGCCGGCCATCCCGCTCAGGCAGTGGCCATCAACGCCCGGCTGAGAGAGGTGCAGACCGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp CTTCGAATCTCCTCCTCCAGGGCCCGATGCTGCCTGGCTAGAGCCTaGGTGGAGAACTCGTCGTGCCCCAGCTCGGGGCTGGACACCAGG +
Preference number: 5 (lower is better)
Translates to: LRISSSRARCCLARA*VENSSCPSSGLDTR
Trigger: CCTGGTGTCCAGCCCCGAGCTGGGGCACGACGAGTTCTCCACGCAGGCTCTAGCCAGGCAGCATCGGGCCCTGGAGGAGGAGATTCGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp TCCAGGGTTGGCCGGTGGCTTCGAATCTCCTCCTCCAGGGCCCGATaGTGCCTGGCTAGAGCCTGCGTGGAGAACTCGTCGTGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: SRVGRWLRISSSRAR*CLARACVENSSCPS
Trigger: GCTGGGGCACGACGAGTTCTCCACGCAGGCTCTAGCCAGGCAGCATCGGGCCCTGGAGGAGGAGATTCGAAGCCACCGGCCAACCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp TCATCTTCCACATCGCGGTGGAACTGGTGCTGCTCGCGAGAAGCCTaGAGGCGCCGGCAGCGTTCCCGCATGGGCTGGCACAAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: SSSTSRWNWCCSREA*RRRQRSRMGWHKAL
Trigger: CAGGGCCTTGTGCCAGCCCATGCGGGAACGCTGCCGGCGCCTGCAGGCTTCTCGCGAGCAGCACCAGTTCCACCGCGATGTGGAAGATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp GGCAGGGCTGCTGCCTGTTCCCTCAAGGCGTCCAGGGTTGGCCGGTaGCTTCGAATCTCCTCCTCCAGGGCCCGATGCTGCCTGGCTAGA +
Preference number: 5 (lower is better)
Translates to: GRAAACSLKASRVGR*LRISSSRARCCLAR
Trigger: TCTAGCCAGGCAGCATCGGGCCCTGGAGGAGGAGATTCGAAGCCACCGGCCAACCCTGGACGCCTTGAGGGAACAGGCAGCAGCCCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp ACGGCCCTCGAGGTTCTCTCCACCTCCCCTGCACCCTGGTCCTCCTaGGCCAGTGCTTTGGCCTGGGCCTGGATTGCCTCCACCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TALEVLSTSPAPWSS*ASALAWAWIASTSF
Trigger: GAAGGAGGTGGAGGCAATCCAGGCCCAGGCCAAAGCACTGGCCCAGGAGGACCAGGGTGCAGGGGAGGTGGAGAGAACCTCGAGGGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS-3UTR CAA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGCCGCAGGGCTGCATGTaGGGCCAGGAGGGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGEPQGCM*GQEGLC
Trigger: GCAGAGGCCCTCCTGGCCCAACATGCAGCCCTGCGG...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS CCA 90 bp TGGCTAGAGCCTGCGTGGAGAACTCGTCGTGCCCCAGCTCGGGGCTaGACACCAGGCGCAGTGCGTCAACCAACCAGGCCTCCATGTCGT +
Preference number: 5 (lower is better)
Translates to: WLEPAWRTRRAPARG*TPGAVRQPTRPPCR
Trigger: ACGACATGGAGGCCTGGTTGGTTGACGCACTGCGCCTGGTGTCCAGCCCCGAGCTGGGGCACGACGAGTTCTCCACGCAGGCTCTAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp GCTCGTGGTCAATCATGTCCTGGCTGCTGGCCGCCAGCTGGTGGATaGTCTGCGCGTAGTCGGCCAGGGCTTGCTCCAGCACCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: ARGQSCPGCWPPAGG*SARSRPGLAPAPGA
Trigger: AGCACCAGGTGCTGGAGCAAGCCCTGGCCGACTACGCGCAGACCATCCACCAGCTGGCGGCCAGCAGCCAGGACATGATTGACCACGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS-3UTR CAA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCAGGAGCCTCAGCAGGTaGCGTCCGTCCCGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPRSLSR*RPSRRS
Trigger: CGACCTCCGGGACGGACGCAACCTGCTGAGGCTCCT...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGCTCCAGCCCAAAGTaGTCCTGGGACACGAGGCGC +
Preference number: 5 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGESSSPK*SWDTRR
Trigger: GCGCCTCGTGTCCCAGGACAACTTTGGGCTGGAGCT...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGAGGGCTGTGTGCTTGTaGAGCAGGCGGAGGGCACCG +
Preference number: 5 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQRAVCL*SRRRAP
Trigger: CGGTGCCCTCCGCCTGCTCAACAAGCACACAGCCCT...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACCGCTCCCACTGGGCTaGGAGTTCAGCTGCACGGGC +
Preference number: 5 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGPLPLG*EFSCTG
Trigger: GCCCGTGCAGCTGAACTCCAAGCCCAGTGGGAGCGG...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGCCTTTTCCCGAATCTaGTCGGCGTGGATGTTGCCT +
Preference number: 5 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTAFSRI*SAWMLP
Trigger: AGGCAACATCCACGCCGACAAGATTCGGGAAAAGGC...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CAA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGACACCCGCGCCAGGGCTaGGCGTGCCCCGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRHPRQG*ACPVQE
Trigger: TTCCTGCACGGGGCACGCCAAGCCCTGGCGCGGGTG...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCAACGGAGGGAGGGAGTaGGCCTGGGACCTTGCCCCC +
Preference number: 5 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPNGGRE*AWDLAP
Trigger: GGGGGCAAGGTCCCAGGCCAACTCCCTCCCTCCGTT...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS GCA 90 bp CCAGCTCGTGCAGCTGCAGCAGGTCCTCCACTCCTGCTAGGTGCCTaGCCAGGTCCTGAGACTGCAGCCGGCCCTTCATCTCTTCCATCC +
Preference number: 5 (lower is better)
Translates to: PARAAAAGPPLLLGA*PGPETAAGPSSLPS
Trigger: GGATGGAAGAGATGAAGGGCCGGCTGCAGTCTCAGGACCTGGGCAGGCACCTAGCAGGAGTGGAGGACCTGCTGCAGCTGCACGAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp GGAGAACTCGTCGTGCCCCAGCTCGGGGCTGGACACCAGGCGCAGTaGGTCAACCAACCAGGCCTCCATGTCGTTTGCATCGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: GELVVPQLGAGHQAQ*VNQPGLHVVCIGLE
Trigger: TTCCAGGCCGATGCAAACGACATGGAGGCCTGGTTGGTTGACGCACTGCGCCTGGTGTCCAGCCCCGAGCTGGGGCACGACGAGTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp CAGGCTGACAGGCACTTCTCCGTGGTATGGCACTCCCGCGCTGGCTaGCTTGGCATCCTTGTAAAAGCCGAGGCTCCCACGCCGCAGGAC +
Preference number: 5 (lower is better)
Translates to: QADRHFSVVWHSRAG*LGILVKAEAPTPQD
Trigger: GTCCTGCGGCGTGGGAGCCTCGGCTTTTACAAGGATGCCAAGGCAGCCAGCGCGGGAGTGCCATACCACGGAGAAGTGCCTGTCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000530775.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp TCCGAGTGCTCTCTGGGTGCTCGTGGTCAATCATGTCCTGGCTGCTaGCCGCCAGCTGGTGGATGGTCTGCGCGTAGTCGGCCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: SECSLGARGQSCPGC*PPAGGWSARSRPGL
Trigger: AAGCCCTGGCCGACTACGCGCAGACCATCCACCAGCTGGCGGCCAGCAGCCAGGACATGATTGACCACGAGCACCCAGAGAGCACTCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS-3UTR CAA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAACGCTCCCAAGCCTTGTaGATGTCCGAGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKRSQAL*MSEMSR
Trigger: CCGGCTCATCTCGGACATCAACAAGGCTTGGGAGCG...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGGGGCAGAGGCCTGGCTaGCCCCAGGGTGACCCTCGG +
Preference number: 5 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGGQRPG*PQGDPR
Trigger: CCGAGGGTCACCCTGGGGCAAGCCAGGCCTCTGCCC...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp ACTGGGGGCATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCAAGACGGCCCAGAAATaGCTGCGCTGCGTCTTGATT +
Preference number: 5 (lower is better)
Translates to: TGGMVMARVMPRVVLGTTKTAQK*LRCVLI
Trigger: AATCAAGACGCAGCGCAGCAATTTCTGGGCCGTCTT...GGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CAA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAATCCAGCCAGTCTTTGTaGGCAGCCAGCTCGGCCATG +
Preference number: 5 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGESSQSL*AASSAM
Trigger: CATGGCCGAGCTGGCTGCCAACAAAGACTGGCTGGA...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCAAGAGGCTGCGGGCCTaGGCTTGGGTGGTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPKRLRA*AWVVVS
Trigger: GGAGACCACCACCCAAGCCAAGGCCCGCAGCCTCTT...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp ATGGTCATGGCCCGGGTCATGCCCCGGGTGGTGCTGGGCACCACCGGCTCTTCAGGTGATGGGTTGACCTaGGCAACAGACCCTAGCAGC +
Preference number: 5 (lower is better)
Translates to: MVMARVMPRVVLGTTGSSGDGLT*ATDPSS
Trigger: GCTGCTAGGGTCTGTTGCCAAGGTCAACCCATCACC...TGAAGAGCCGGTGGTGCCCAGCACCACCCGGGGCATGACCCGGGCCATGACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS GCA 90 bp GTCACCCACAAAATCTCATCTTCCACATCGCGGTGGAACTGGTGCTaGTCGCGAGAAGCCTGCAGGCGCCGGCAGCGTTCCCGCATGGGC +
Preference number: 5 (lower is better)
Translates to: VTHKISSSTSRWNWC*SREACRRRQRSRMG
Trigger: GCCCATGCGGGAACGCTGCCGGCGCCTGCAGGCTTCTCGCGAGCAGCACCAGTTCCACCGCGATGTGGAAGATGAGATTTTGTGGGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp ATATCCGAGTGCTCTCTGGGTGCTCGTGGTCAATCATGTCCTGGCTaGTGGCCGCCAGCTGGTGGATGGTCTGCGCGTAGTCGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: ISECSLGARGQSCPG*WPPAGGWSARSRPG
Trigger: CCCTGGCCGACTACGCGCAGACCATCCACCAGCTGGCGGCCAGCAGCCAGGACATGATTGACCACGAGCACCCAGAGAGCACTCGGATAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp GCAGGCCGTTCCCGTGCACCCTGCTCACTCCGTTCCCATTCATGCTaGCAGCTGCTAGTTACAGAGCCCAGGGCCCAGAGTCCATGCTCC +
Preference number: 5 (lower is better)
Translates to: AGRSRAPCSLRSHSC*QLLVTEPRAQSPCS
Trigger: GGAGCATGGACTCTGGGCCCTGGGCTCTGTAACTAGCAGCTGGCAGCATGAATGGGAACGGAGTGAGCAGGGTGCACGGGAACGGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617502.5
CDS CCA 90 bp GCGCCGCTGCCAACTCGCACAGTGCCTCATAGCTCTGCTCTAGCTTaGCCACCCGCTCCGACACCAGCTGCGGGTCGCAAGGTCTATACT +
Preference number: 5 (lower is better)
Translates to: APLPTRTVPHSSALA*PPAPTPAAGRKVYT
Trigger: AGTATAGACCTTGCGACCCGCAGCTGGTGTCGGAGCGGGTGGCCAAGCTAGAGCAGAGCTATGAGGCACTGTGCGAGTTGGCAGCGGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp CGCTCTGTCACCCACAAAATCTCATCTTCCACATCGCGGTGGAACTaGTGCTGCTCGCGAGAAGCCTGCAGGCGCCGGCAGCGTTCCCGC +
Preference number: 5 (lower is better)
Translates to: RSVTHKISSSTSRWN*CCSREACRRRQRSR
Trigger: GCGGGAACGCTGCCGGCGCCTGCAGGCTTCTCGCGAGCAGCACCAGTTCCACCGCGATGTGGAAGATGAGATTTTGTGGGTGACAGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp GGCAGCCGCTCTGTCACCCACAAAATCTCATCTTCCACATCGCGGTaGAACTGGTGCTGCTCGCGAGAAGCCTGCAGGCGCCGGCAGCGT +
Preference number: 5 (lower is better)
Translates to: GSRSVTHKISSSTSR*NWCCSREACRRRQR
Trigger: ACGCTGCCGGCGCCTGCAGGCTTCTCGCGAGCAGCACCAGTTCCACCGCGATGTGGAAGATGAGATTTTGTGGGTGACAGAGCGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS-3UTR CAA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAAGCCGCTCCCAAGCCTaGTTGATGTCCGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKSRSQA*LMSEMS
Trigger: GCTCATCTCGGACATCAACAAGGCTTGGGAGCGGCT...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCAGCTCCAGCCCAAAGTaGTCCTGGGACACGAGGCGC +
Preference number: 5 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPSSSPK*SWDTRR
Trigger: GCGCCTCGTGTCCCAGGACAACTTTGGGCTGGAGCT...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGACTGGGCCAGGCGACCTaGCCGGCTCTCCCACATTCG +
Preference number: 5 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRLGQAT*PALPHS
Trigger: CGAATGTGGGAGAGCCGGCAAGGTCGCCTGGCCCAG...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAACAGCTCAGCTCGGTaGGCATCAAAGAGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGENSSAR*ASKRLR
Trigger: CCGCAGCCTCTTTGATGCCAACCGAGCTGAGCTGTT...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGGTAGTCGGCCAGGGCTaGCTCCAGCACCTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQVVGQG*LQHLVL
Trigger: AAGCACCAGGTGCTGGAGCAAGCCCTGGCCGACTAC...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGCCAGCAATGAGCCCATaGGCCAGCGCATTGGCGCTA +
Preference number: 5 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQPAMSP*ASALAL
Trigger: TAGCGCCAATGCGCTGGCCAATGGGCTCATTGCTGG...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAATTCTGCCAGGACCTGTaGGCAGCCTTCTTCCCGAAG +
Preference number: 5 (lower is better)
Translates to: RVRHCPHRGEGQRHEAGEFCQDL*AAFFPK
Trigger: CTTCGGGAAGAAGGCTGCCAACAGGTCCTGGCAGAA...TTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAATTCTGCCAGGACCTGTaGGCAGCCTTCTTCCCGAAG +
Preference number: 5 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKFCQDL*AAFFPK
Trigger: CTTCGGGAAGAAGGCTGCCAACAGGTCCTGGCAGAA...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACTCTGGTCTACCGGTTaGGAGCCCACTCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGLWSTG*EPTLGL
Trigger: CAGCCCCAGAGTGGGCTCCAAACCGGTAGACCAGAG...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS GCA 90 bp CATGCAGGCCGTTCCCGTGCACCCTGCTCACTCCGTTCCCATTCATaGTGCCAGCTGCTAGTTACAGAGCCCAGGGCCCAGAGTCCATGC +
Preference number: 5 (lower is better)
Translates to: HAGRSRAPCSLRSHS*CQLLVTEPRAQSPC
Trigger: GCATGGACTCTGGGCCCTGGGCTCTGTAACTAGCAGCTGGCAGCATGAATGGGAACGGAGTGAGCAGGGTGCACGGGAACGGCCTGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617502.5
CDS CCA 90 bp GCTCGCAGGGCATCCTCCAGTCGCTTCCCTCGAAGTTCCAGCTCGTaGCCCAGGCGTTTCCACATTTCCTGCAGCTCAGCCAGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: ARRASSSRFPRSSSS*PRRFHISCSSASSG
Trigger: TCCAGAGCTGGCTGAGCTGCAGGAAATGTGGAAACGCCTGGGCCACGAGCTGGAACTTCGAGGGAAGCGACTGGAGGATGCCCTGCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS-3UTR CAA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGACCCCGCTAAGGGAGTaGGCCAACTGCCGGTCATTG +
Preference number: 5 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQTPLRE*ANCRSL
Trigger: CAATGACCGGCAGTTGGCCAACTCCCTTAGCGGGGT...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGACCCCGCTAAGGGAGTaGGCCAACTGCCGGTCATTG +
Preference number: 5 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGETPLRE*ANCRSL
Trigger: CAATGACCGGCAGTTGGCCAACTCCCTTAGCGGGGT...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTTCCCGCATGGCAGCCTaGCGGTCGAAGCGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: REAELFNHLLGQTQGGGCSRMAA*RSKRAA
Trigger: GGCCGCCCGCTTCGACCGCAAGGCTGCCATGCGGGA...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGTCAAGGCGTCCAGGGTaGGCCGGTGGCTTCGAATCT +
Preference number: 5 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGESRRPG*AGGFES
Trigger: AGATTCGAAGCCACCGGCCAACCCTGGACGCCTTGA...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGAACAGCTCAGCTCGGTaGGCATCAAAGAGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQNSSAR*ASKRLR
Trigger: CCGCAGCCTCTTTGATGCCAACCGAGCTGAGCTGTT...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAAGGCCGGCATACAGCTaGTCCACCTGGGCTTGGCGG +
Preference number: 5 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRRPAYS*STWAWR
Trigger: CCGCCAAGCCCAGGTGGACAAGCTGTATGCCGGCCT...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACACACCCGCGCCAGGGCTaGGCGTGCCCCGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATHPRQG*ACPVQE
Trigger: TTCCTGCACGGGGCACGCCAAGCCCTGGCGCGGGTG...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACAAGGGCCTCGGCAGCGTaGAGGTCGCGGCCAGTCCCG +
Preference number: 5 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATRASAA*RSRPVP
Trigger: CGGGACTGGCCGCGACCTCAACGCTGCCGAGGCCCT...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCAGGGCCTCGGCAGCGTaGAGGTCGCGGCCAGTCCCG +
Preference number: 5 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAARASAA*RSRPVP
Trigger: CGGGACTGGCCGCGACCTCAACGCTGCCGAGGCCCT...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGCCCACATGGCCTATGTaGAGGGTGCGGCACTGTCCA +
Preference number: 5 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQPTWPM*RVRHCP
Trigger: TGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS GCA 90 bp TCTGTCACCCACAAAATCTCATCTTCCACATCGCGGTGGAACTGGTaGTGCTCGCGAGAAGCCTGCAGGCGCCGGCAGCGTTCCCGCATG +
Preference number: 5 (lower is better)
Translates to: SVTHKISSSTSRWNW*CSREACRRRQRSRM
Trigger: CATGCGGGAACGCTGCCGGCGCCTGCAGGCTTCTCGCGAGCAGCACCAGTTCCACCGCGATGTGGAAGATGAGATTTTGTGGGTGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp CTCAGCGCTGCGCACCAGTGGCTCCTGGCTGCAGAGCCAGGCCTCTaGCATCCCTGCATCTCTTCCAAACACAAGCACCTCCAAAACCAG +
Preference number: 5 (lower is better)
Translates to: LSAAHQWLLAAEPGL*HPCISSKHKHLQNQ
Trigger: CTGGTTTTGGAGGTGCTTGTGTTTGGAAGAGATGCAGGGATGGCAGAGGCCTGGCTCTGCAGCCAGGAGCCACTGGTGCGCAGCGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp GCGCACCAGTGGCTCCTGGCTGCAGAGCCAGGCCTCTGCCATCCCTaGATCTCTTCCAAACACAAGCACCTCCAAAACTGGCAGGATCGG +
Preference number: 5 (lower is better)
Translates to: AHQWLLAAEPGLCHP*ISSKHKHLQNWQDR
Trigger: CCGATCCTGCCAGTTTTGGAGGTGCTTGTGTTTGGAAGAGATGCAGGGATGGCAGAGGCCTGGCTCTGCAGCCAGGAGCCACTGGTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532650.1
CDS GCA 90 bp CTCAGCGCTGCGCACCAGTGGCTCCTGGCTGCAGAGCCAGGCCTCTaGCATCCCTGCATCTCTTCCAAACACAAGCACCTCCAAAACTGG +
Preference number: 5 (lower is better)
Translates to: LSAAHQWLLAAEPGL*HPCISSKHKHLQNW
Trigger: CCAGTTTTGGAGGTGCTTGTGTTTGGAAGAGATGCAGGGATGGCAGAGGCCTGGCTCTGCAGCCAGGAGCCACTGGTGCGCAGCGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532650.1
CDS CCA 90 bp TTTTCCCGAATCTTGTCGGCGTGGATGTTGCCTTCAGATACCAGCTaGCGGCCAGCCTCCAGGAGCCCGTGGATCCGTTCCCCATTGGCG +
Preference number: 5 (lower is better)
Translates to: FSRILSAWMLPSDTS*RPASRSPWIRSPLA
Trigger: CGCCAATGGGGAACGGATCCACGGGCTCCTGGAGGCTGGCCGCCAGCTGGTATCTGAAGGCAACATCCACGCCGACAAGATTCGGGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp GCTGGACGCTGGGCAGGTCCTTGCCATGCTCCATGGAGCTGGCCATaGGCAGCCGCTCTGTCACCCACAAAATCTCATCTTCCACATCGC +
Preference number: 5 (lower is better)
Translates to: AGRWAGPCHAPWSWP*AAALSPTKSHLPHR
Trigger: GCGATGTGGAAGATGAGATTTTGTGGGTGACAGAGCGGCTGCCCATGGCCAGCTCCATGGAGCATGGCAAGGACCTGCCCAGCGTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp CCAGCCAGCTCCTTCAGGCCGGCATACAGCTTGTCCACCTGGGCTTaGCGGATGGATATCCGAGTGCTCTCTGGGTGCTCGTGGTCAATC +
Preference number: 5 (lower is better)
Translates to: PASSFRPAYSLSTWA*RMDIRVLSGCSWSI
Trigger: GATTGACCACGAGCACCCAGAGAGCACTCGGATATCCATCCGCCAAGCCCAGGTGGACAAGCTGTATGCCGGCCTGAAGGAGCTGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp GCTGAGACAGCTTCTCTGAGATCTCCTCGGCCGCATAGTGGCTCCTaGCCAGCAGCTCCTTCCCCATGTCGATGCAGGAGGAGAAGCGGT +
Preference number: 5 (lower is better)
Translates to: AETASLRSPRPHSGS*PAAPSPCRCRRRSG
Trigger: ACCGCTTCTCCTCCTGCATCGACATGGGGAAGGAGCTGCTGGCCAGGAGCCACTATGCGGCCGAGGAGATCTCAGAGAAGCTGTCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000532902.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS-3UTR CAA 90 bp ATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGGCAGGGCCAGCCCGTaGAGCCACTGCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: MAAFTTRSHELISACGWKGRASP*SHCSFS
Trigger: GGAGAAGGAGCAGTGGCTCAACGGGCTGGCCCTGCC...TTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CAA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACGGCAGGGCCAGCCCGTaGAGCCACTGCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: THLEAIESSWRWSGSWSYGRASP*SHCSFS
Trigger: GGAGAAGGAGCAGTGGCTCAACGGGCTGGCCCTGCC...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGAGAGCTGCCTTCTaGCCGTCTGCCAGACGCCGA +
Preference number: 5 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRVRAAF*PSARRR
Trigger: TCGGCGTCTGGCAGACGGCAAGAAGGCAGCTCTCAC...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAGCCTCTATCTCTGCCTaGATGCCTTGCTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKASISA*MPCWFL
Trigger: CAAGAACCAGCAAGGCATCAAGGCAGAGATAGAGGC...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGAGGACACAGGCTaGGGCAGAGAGGCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAAGEDTG*GREAVV
Trigger: GACCACAGCCTCTCTGCCCAAGCCTGTGTCCTCTCC...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS GCA 90 bp TTCCCTCGAAGTTCCAGCTCGTGGCCCAGGCGTTTCCACATTTCCTaGAGCTCAGCCAGCTCTGGACCTGCTGCTGCTGCACCTAGAGCA +
Preference number: 5 (lower is better)
Translates to: FPRSSSSWPRRFHIS*SSASSGPAAAAPRA
Trigger: TGCTCTAGGTGCAGCAGCAGCAGGTCCAGAGCTGGCTGAGCTGCAGGAAATGTGGAAACGCCTGGGCCACGAGCTGGAACTTCGAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp GAGGAGAAGCGGTCTGCCCGGGCCTCTATCTCTGCCTTGATGCCTTaGTGGTTCTTGATGACTAGATCCGCGGAGGACACATCCCGGGGA +
Preference number: 5 (lower is better)
Translates to: EEKRSARASISALMP*WFLMTRSAEDTSRG
Trigger: TCCCCGGGATGTGTCCTCCGCGGATCTAGTCATCAAGAACCAGCAAGGCATCAAGGCAGAGATAGAGGCCCGGGCAGACCGCTTCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000532902.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp GCGCACCAGTGGCTCCTGGCTGCAGAGCCAGGCCTCTGCCATCCCTaGATCTCTTCCAAACACAAGCACCTCCAAAACCAGCTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: AHQWLLAAEPGLCHP*ISSKHKHLQNQLKP
Trigger: TGGCTTCAGCTGGTTTTGGAGGTGCTTGTGTTTGGAAGAGATGCAGGGATGGCAGAGGCCTGGCTCTGCAGCCAGGAGCCACTGGTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS-3UTR CAA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCAGGAGCCTCAGCAGGTaGCGTCCGTCCCGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAARSLSR*RPSRRS
Trigger: CGACCTCCGGGACGGACGCAACCTGCTGAGGCTCCT...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCAGGGCTGTGTGCTTGTaGAGCAGGCGGAGGGCACCG +
Preference number: 5 (lower is better)
Translates to: EKLSCLITSLARLKAVAVRAVCL*SRRRAP
Trigger: CGGTGCCCTCCGCCTGCTCAACAAGCACACAGCCCT...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp ACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGACCCTCAATCAGCTCGCAGGGCTGTGTGCTaGTTGAGCAGGCGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: TRSHELISACGWKDPQSARRAVC*LSRRRA
Trigger: TGCCCTCCGCCTGCTCAACAAGCACACAGCCCTGCG...AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CAA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACACCGCTCCCACTGGGCTaGGAGTTCAGCTGCACGGGC +
Preference number: 5 (lower is better)
Translates to: PTTSLELNSRREGLPLGTPLPLG*EFSCTG
Trigger: GCCCGTGCAGCTGAACTCCAAGCCCAGTGGGAGCGG...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGATCAAGGCGTCCAGGGTaGGCCGGTGGCTTCGAATCT +
Preference number: 5 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRSRRPG*AGGFES
Trigger: AGATTCGAAGCCACCGGCCAACCCTGGACGCCTTGA...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGATGCTGCCACCTGTGGTaGAGCTGCTCCTGGGTGTTG +
Preference number: 5 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRCCHLW*SCSWVL
Trigger: CAACACCCAGGAGCAGCTCAACCACAGGTGGCAGCA...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAGTGAGAGCTGCCTTCTaGCCGTCTGCCAGACGCCGA +
Preference number: 5 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRVRAAF*PSARRR
Trigger: TCGGCGTCTGGCAGACGGCAAGAAGGCAGCTCTCAC...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGCGGCAGCCAGGGCATTaGCCTCTCGAGTCAGTTCGC +
Preference number: 5 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGRQPGH*PLESVR
Trigger: GCGAACTGACTCGAGAGGCAAATGCCCTGGCTGCCG...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGACGGCAGCCAGGGCATTaGCCTCTCGAGTCAGTTCGC +
Preference number: 5 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGRQPGH*PLESVR
Trigger: GCGAACTGACTCGAGAGGCAAATGCCCTGGCTGCCG...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCTGCTGCTGCTCCCGGTaGTCCCGAAGACGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: EKLSCLITSLARLKAVAVCCCSR*SRRRPR
Trigger: TCTGGGCCGTCTTCGGGACAACCGGGAGCAGCAGCA...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACAAGAGGCTGCGGGCCTaGGCTTGGGTGGTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: THLEAIESSWRWSGSWSYKRLRA*AWVVVS
Trigger: GGAGACCACCACCCAAGCCAAGGCCCGCAGCCTCTT...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACGCCTCCATCTCCTGCTaGCGGCACAGCATCCCCTCC +
Preference number: 5 (lower is better)
Translates to: THLEAIESSWRWSGSWSYASISC*RHSIPS
Trigger: GGAGGGGATGCTGTGCCGCAAGCAGGAGATGGAGGC...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGACGTTCTCTGCCGTCTTaGCTGCGGAGCACAACAGGC +
Preference number: 5 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRRSLPS*LRSTTG
Trigger: GCCTGTTGTGCTCCGCAGCAAAGACGGCAGAGAACG...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCGGACACTGTGCTGAGTaGGCCGCAGTGGACAGCAGG +
Preference number: 5 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPGHCAE*AAVDSR
Trigger: CCTGCTGTCCACTGCGGCCAACTCAGCACAGTGTCC...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CAA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGCCAGAGGCTGCGGTaGGCTGCTCAGTGGAAATCA +
Preference number: 5 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAAGQRLR*AAQWKS
Trigger: TGATTTCCACTGAGCAGCCAACCGCAGCCTCTGGCC...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS GCA 90 bp TCTCAATGGAGTCTGCCTTTTCCCGAATCTTGTCGGCGTGGATGTTaGCTTCAGATACCAGCTGGCGGCCAGCCTCCAGGAGCCCGTGGA +
Preference number: 5 (lower is better)
Translates to: SQWSLPFPESCRRGC*LQIPAGGQPPGARG
Trigger: TCCACGGGCTCCTGGAGGCTGGCCGCCAGCTGGTATCTGAAGGCAACATCCACGCCGACAAGATTCGGGAAAAGGCAGACTCCATTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 90 bp TGCCTCCTCTCAATGGAGTCTGCCTTTTCCCGAATCTTGTCGGCGTaGATGTTGCCTTCAGATACCAGCTGGCGGCCAGCCTCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: CLLSMESAFSRILSA*MLPSDTSWRPASRS
Trigger: GCTCCTGGAGGCTGGCCGCCAGCTGGTATCTGAAGGCAACATCCACGCCGACAAGATTCGGGAAAAGGCAGACTCCATTGAGAGGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS-3UTR CAA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAGAGGGTCACGATCGTTaGCTCGATCCACTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: AELFNHLLGQTQGGGCPREGHDR*LDPLQQ
Trigger: CTGCTGCAGTGGATCGAGCAAACGATCGTGACCCTC...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGTTGCTGCGCTGCGTCTaGATTCTTCTTGTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQLLRCV*ILLVPP
Trigger: AGGAGGCACAAGAAGAATCAAGACGCAGCGCAGCAA...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAAGACGGCCCAGAAATaGCTGCGCTGCGTCTTGATT +
Preference number: 5 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQKTAQK*LRCVLI
Trigger: AATCAAGACGCAGCGCAGCAATTTCTGGGCCGTCTT...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTTGCTGCTGCTCCCGGTaGTCCCGAAGACGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: REAELFNHLLGQTQGGGCCCCSR*SRRRPR
Trigger: TCTGGGCCGTCTTCGGGACAACCGGGAGCAGCAGCA...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAGCTCTCGCCCTTCCTaGTCCACCTTGTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGSSRPS*STLSSQ
Trigger: CTGGCTGGACAAGGTGGACAAGGAAGGGCGAGAGCT...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCTTCTTGAGCAGGATGTaGACGCTGGTGAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPFLSRM*TLVRSL
Trigger: CAAGGACCTCACCAGCGTCAACATCCTGCTCAAGAA...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGGCCTCTATCTCTGCCTaGATGCCTTGCTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQASISA*MPCWFL
Trigger: CAAGAACCAGCAAGGCATCAAGGCAGAGATAGAGGC...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCCCACATGGCCTATGTaGAGGGTGCGGCACTGTCCA +
Preference number: 5 (lower is better)
Translates to: KLSCLITSLARLKAVAVPPTWPM*RVRHCP
Trigger: TGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCCAGGAGGTGGAGGTaGCAATGGGCTGTGATTGCG +
Preference number: 5 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPPRRWR*QWAVIA
Trigger: CGCAATCACAGCCCATTGCAACCTCCACCTCCTGGG...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS TCA 90 bp GCAATGAGCCCATTGGCCAGCGCATTGGCGCTATCTACGCGCTCCTaGCCGATGGTGCTTGTGTCCCGGGAGAACTCTCGGAATTTGTCT +
Preference number: 5 (lower is better)
Translates to: AMSPLASALALSTRS*PMVLVSRENSRNLS
Trigger: AGACAAATTCCGAGAGTTCTCCCGGGACACAAGCACCATCGGTCAGGAGCGCGTAGATAGCGCCAATGCGCTGGCCAATGGGCTCATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp CTAAGGGAGTTGGCCAACTGCCGGTCATTGAGGGTCACGATCGTTTaGTCGATCCACTGCAGCAGCTCCGAGGCCAGGGACTCGTATTTC +
Preference number: 5 (lower is better)
Translates to: LRELANCRSLRVTIV*SIHCSSSEARDSYF
Trigger: GAAATACGAGTCCCTGGCCTCGGAGCTGCTGCAGTGGATCGAGCAAACGATCGTGACCCTCAATGACCGGCAGTTGGCCAACTCCCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 90 bp TCTCTTCCAAACACAAGCACCTCCAAAACTGGCAGGATCGGGGGTTaGAGGAAGATGGTGGGTCAGAGTGGCCACTGGCAGGGCACAGTG +
Preference number: 5 (lower is better)
Translates to: SLPNTSTSKTGRIGG*RKMVGQSGHWQGTV
Trigger: CACTGTGCCCTGCCAGTGGCCACTCTGACCCACCATCTTCCTGCAACCCCCGATCCTGCCAGTTTTGGAGGTGCTTGTGTTTGGAAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532650.1
CDS-3UTR CAA 90 bp GCAGCAGGCAGTTGTCCTGACAAGAGGGCGGTCCCTGTCGACTGTCCCTGGCAGTTATGCACGATGGCGTaGAAAGCTAGTCCATCTCTC +
Preference number: 5 (lower is better)
Translates to: AAGSCPDKRAVPVDCPWQLCTMA*KASPSL
Trigger: GAGAGATGGACTAGCTTTCAACGCCATCGTGCATAA...CTGCCAGGGACAGTCGACAGGGACCGCCCTCTTGTCAGGACAACTGCCTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGAGGGTCACGATCGTTaGCTCGATCCACTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGEGHDR*LDPLQQ
Trigger: CTGCTGCAGTGGATCGAGCAAACGATCGTGACCCTC...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCCTTTCTCGGTAAACTaGGGCGGCTTCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPPFSVN*GGFSTV
Trigger: CACCGTGGAGAAGCCGCCCAAGTTTACCGAGAAAGG...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGACCTTTCTCGGTAAACTaGGGCGGCTTCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRPFSVN*GGFSTV
Trigger: CACCGTGGAGAAGCCGCCCAAGTTTACCGAGAAAGG...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp ATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAATGCTGCCACCTGTGGTaGAGCTGCTCCTGGGTGTTG +
Preference number: 5 (lower is better)
Translates to: MAAFTTRSHELISACGWKCCHLW*SCSWVL
Trigger: CAACACCCAGGAGCAGCTCAACCACAGGTGGCAGCA...TTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CAA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACTGGGCCAGGCGACCTaGCCGGCTCTCCCACATTCG +
Preference number: 5 (lower is better)
Translates to: PIIVSLQCPQACQLGVQILGQAT*PALPHS
Trigger: CGAATGTGGGAGAGCCGGCAAGGTCGCCTGGCCCAG...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCTCCAGCCAGTCTTTGTaGGCAGCCAGCTCGGCCATG +
Preference number: 5 (lower is better)
Translates to: EKLSCLITSLARLKAVAVSSQSL*AASSAM
Trigger: CATGGCCGAGCTGGCTGCCAACAAAGACTGGCTGGA...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAAGGCCTCGTGCCGCTaGATGAGGCTCTCAACTTCG +
Preference number: 5 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGKASCR*MRLSTS
Trigger: CGAAGTTGAGAGCCTCATCAAGCGGCACGAGGCCTT...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CACTGGAGGTCACTGTCAGAGGGAAATGAGACCAGGTCAGGGAAGCTCTCAGTGCGTTCTCTGCCGTCTTaGCTGCGGAGCACAACAGGC +
Preference number: 5 (lower is better)
Translates to: HWRSLSEGNETRSGKLSVRSLPS*LRSTTG
Trigger: GCCTGTTGTGCTCCGCAGCAAAGACGGCAGAGAACG...CACTGAGAGCTTCCCTGACCTGGTCTCATTTCCCTCTGACAGTGACCTCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCGGTGATGGGTTGACCTaGGCAACAGACCCTAGCAGC +
Preference number: 5 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPGDGLT*ATDPSS
Trigger: GCTGCTAGGGTCTGTTGCCAAGGTCAACCCATCACC...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGAGGCACGAGGCTGGGGAAAATTTTTGTGTCTAACTaGTCTCATAGCCCTCACCGC +
Preference number: 5 (lower is better)
Translates to: GCGTVHTVVRDRGTRLGKIFVSN*SHSPHR
Trigger: GCGGTGAGGGCTATGAGACAAGTTAGACACAAAAAT...TTTCCCCAGCCTCGTGCCTCTGTCCCTCACCACGGTGTGGACAGTGCCGCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS TCA 90 bp TCATCTTGCAGCTGTTTGAAGCGTCCTTCCAGCACGCTGGCATACTaGGCAGGGTTGATGAAAGCAGCTGGTGAAAGCAGGAGGCCCCCG +
Preference number: 5 (lower is better)
Translates to: SSCSCLKRPSSTLAY*AGLMKAAGESRRPP
Trigger: CGGGGGCCTCCTGCTTTCACCAGCTGCTTTCATCAACCCTGCTCAGTATGCCAGCGTGCTGGAAGGACGCTTCAAACAGCTGCAAGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617502.5
CDS GCA 90 bp CTGCTGCTCCCGGTTGTCCCGAAGACGGCCCAGAAATTGCTGCGCTaGGTCTTGATTCTTCTTGTGCCTCCTCTCAATGGAGTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: LLLPVVPKTAQKLLR*VLILLVPPLNGVCL
Trigger: AAGGCAGACTCCATTGAGAGGAGGCACAAGAAGAATCAAGACGCAGCGCAGCAATTTCTGGGCCGTCTTCGGGACAACCGGGAGCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS-3UTR CAA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCGCCGAGCTGCTGTCATaGTCCCAGTCCGAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAAAELLS*SQSESG
Trigger: TCCTGACTCGGACTGGGACAATGACAGCAGCTCGGC...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTTGCACTTTCTGCTCCTaGAGGAACTGCAGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAACTFCS*RNCSAL
Trigger: CAAGGCACTGCAGTTCCTCAAGGAGCAGAAAGTGCA...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCCTCCACACTGATGTCTaGGATCTGGAATCGAAGGAT +
Preference number: 5 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPLHTDV*DLESKD
Trigger: ATCCTTCGATTCCAGATCCAAGACATCAGTGTGGAG...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGACAGGACTTCTTCTCCTTGTaGTCTTCTGTCTCCACACTG +
Preference number: 5 (lower is better)
Translates to: PTWPMLRVRHCPHRGEGQDFFSL*SSVSTL
Trigger: CAGTGTGGAGACAGAAGACAACAAGGAGAAGAAGTC...CTGTCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGAGTGCCCGCTGACTTCTTCTCCTaGTTGTCTTCTGTCTCCACA +
Preference number: 5 (lower is better)
Translates to: RFLAGLRGEEPEGRRRVPADFFS*LSSVST
Trigger: TGTGGAGACAGAAGACAACAAGGAGAAGAAGTCAGC...GGGCACTCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGAGCTGACTTCTTCTCCTaGTTGTCTTCTGTCTCCACA +
Preference number: 5 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGADFFS*LSSVST
Trigger: TGTGGAGACAGAAGACAACAAGGAGAAGAAGTCAGC...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAAGAAGCAGGGCATCCTaGGCTGACTTCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRRSRAS*ADFFSL
Trigger: CAAGGAGAAGAAGTCAGCCAAGGATGCCCTGCTTCT...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp ATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGCCAACTGCCGGTCATaGAGGGTCACGATCGTTTGC +
Preference number: 5 (lower is better)
Translates to: MAAFTTRSHELISACGWKANCRS*RVTIVC
Trigger: GCAAACGATCGTGACCCTCAATGACCGGCAGTTGGC...TTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CAA 90 bp CACTGGAGGTCACTGTCAGAGGGAAATGAGACCAGGTCAGGGAAGCTCTCAGTGAGCCGCTCCCAAGCCTaGTTGATGTCCGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: HWRSLSEGNETRSGKLSVSRSQA*LMSEMS
Trigger: GCTCATCTCGGACATCAACAAGGCTTGGGAGCGGCT...CACTGAGAGCTTCCCTGACCTGGTCTCATTTCCCTCTGACAGTGACCTCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACGCAGGGCTGTGTGCTaGTTGAGCAGGCGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: PIIVSLQCPQACQLGVQIRRAVC*LSRRRA
Trigger: TGCCCTCCGCCTGCTCAACAAGCACACAGCCCTGCG...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAAGCTGCTCCTGGGTGTaGACAATGCGGTCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGSCSWV*TMRSLP
Trigger: AGGCAAAGACCGCATTGTCAACACCCAGGAGCAGCT...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp ATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAATGGATCCGTTCCCCATaGGCGTCCATGGTGCTCATG +
Preference number: 5 (lower is better)
Translates to: MAAFTTRSHELISACGWKWIRSP*ASMVLM
Trigger: CATGAGCACCATGGACGCCAATGGGGAACGGATCCA...TTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CAA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGATTGTCGGCGTGGATGTaGCCTTCAGATACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGLSAWM*PSDTSW
Trigger: CCAGCTGGTATCTGAAGGCAACATCCACGCCGACAA...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGCCTTTTCCCGAATCTaGTCGGCGTGGATGTTGCCT +
Preference number: 5 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGAFSRI*SAWMLP
Trigger: AGGCAACATCCACGCCGACAAGATTCGGGAAAAGGC...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CTCAAGGCGGTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTCAGCTCGTGACAATCTaGCAGGAAATGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: LKAVAVPEQHTWKPLRAAQLVTI*QEMLLL
Trigger: GAGCAGCAGCATTTCCTGCAAGATTGTCACGAGCTG...AGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCACCGCCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCTTGTCCAGCCAGTCTTaGTTGGCAGCCAGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAALSSQS*LAASSA
Trigger: GGCCGAGCTGGCTGCCAACAAAGACTGGCTGGACAA...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGCAGTGGACAAGCTCTCGCCCTTCCTaGTCCACCTTGTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: ERPSISFKDTVLSWPQWTSSRPS*STLSSQ
Trigger: CTGGCTGGACAAGGTGGACAAGGAAGGGCGAGAGCT...TGTCCACTGCGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CAA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGAAGCATCTGCTGCTTCTaGAGCAGGATGTTGACGCTG +
Preference number: 5 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRSICCF*SRMLTL
Trigger: CAGCGTCAACATCCTGCTCAAGAAGCAGCAGATGCT...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp ACCCGTAGCCACGAGCTCATCTCTGCCTGTGGATGGAAAGACCCTCAATCAGCTCTTGTCCACCTGGGCTaGGCGGATGGATATCCGAGT +
Preference number: 5 (lower is better)
Translates to: TRSHELISACGWKDPQSALVHLG*ADGYPS
Trigger: ACTCGGATATCCATCCGCCAAGCCCAGGTGGACAAG...AGCTGATTGAGGGTCTTTCCATCCACAGGCAGAGATGAGCTCGTGGCTACGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CAA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACCTTGTCCACCTGGGCTaGGCGGATGGATATCCGAGT +
Preference number: 5 (lower is better)
Translates to: THLEAIESSWRWSGSWSYLVHLG*ADGYPS
Trigger: ACTCGGATATCCATCCGCCAAGCCCAGGTGGACAAG...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGCAGTGGACACCTGACCGATGGTGCTaGTGTCCCGGGAGAACTCTC +
Preference number: 5 (lower is better)
Translates to: ERPSISFKDTVLSWPQWTPDRWC*CPGRTL
Trigger: GAGAGTTCTCCCGGGACACAAGCACCATCGGTCAGG...TGTCCACTGCGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CAA 90 bp TCCCCTCTTCTATGTCCTGTTCTTAAGGAATCATGCCCTGAAGTCCTGCTGCCGCCATTGGCCAGCGCATaGGCGCTATCTACGCGCTCC +
Preference number: 5 (lower is better)
Translates to: SPLLCPVLKESCPEVLLPPLASA*ALSTRS
Trigger: GGAGCGCGTAGATAGCGCCAATGCGCTGGCCAATGG...CGGCAGCAGGACTTCAGGGCATGATTCCTTAAGAACAGGACATAGAAGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp GCTGTGGCAATGGCTGCATTCACCACCCGTAGCCACGAGCTCATCTCTGCCTGTAGTTCCCGGACAGCCTaGAAGAAGCGGAACTTGTCT +
Preference number: 5 (lower is better)
Translates to: AVAMAAFTTRSHELISACSSRTA*KKRNLS
Trigger: AGACAAGTTCCGCTTCTTCAAGGCTGTCCGGGAACT...ACAGGCAGAGATGAGCTCGTGGCTACGGGTGGTGAATGCAGCCATTGCCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CAA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGCATCCATCTGCAGGTaGACCTCATCCATCCAGAGC +
Preference number: 5 (lower is better)
Translates to: KLSCLITSLARLKAVAVPASICR*TSSIQS
Trigger: GCTCTGGATGGATGAGGTCAACCTGCAGATGGATGC...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CACTGGAGGTCACTGTCAGAGGGAAATGAGACCAGGTCAGGGAAGCTCTCAGTGAAGGCCTCGTGCCGCTaGATGAGGCTCTCAACTTCG +
Preference number: 5 (lower is better)
Translates to: HWRSLSEGNETRSGKLSVKASCR*MRLSTS
Trigger: CGAAGTTGAGAGCCTCATCAAGCGGCACGAGGCCTT...CACTGAGAGCTTCCCTGACCTGGTCTCATTTCCCTCTGACAGTGACCTCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp CCACTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGTCCTGTAAGCCCAGCTaGAAGACATGTTTGCGCTTT +
Preference number: 5 (lower is better)
Translates to: PLPTWPMLRVRHCPHRGESCKPS*KTCLRF
Trigger: AAAGCGCAAACATGTCTTCAAGCTGGGCTTACAGGA...CTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGATCCTGTAAGCCCAGCTaGAAGACATGTTTGCGCTTT +
Preference number: 5 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGSCKPS*KTCLRF
Trigger: AAAGCGCAAACATGTCTTCAAGCTGGGCTTACAGGA...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGATGTTTAATCACCTCCTaGGCCAGACTCAAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRCLITS*ARLKAV
Trigger: CACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACA...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp TCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGAAGGCGATGTTTAATCACCTCCTaGGCCAGACTCAAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: SERFLAGLRGEEPEGRRRCLITS*ARLKAV
Trigger: CACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACA...TCGCCTTCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS TCA 90 bp GGCAGCTGGGCCGGCTCTCCCTCCCAGAACATCTCCATGGCACAGTaGAGATTCGTCTTCTACAGATCAGATGCTCCAAACAGGCATCTC +
Preference number: 5 (lower is better)
Translates to: GSWAGSPSQNISMAQ*RFVFYRSDAPNRHL
Trigger: GAGATGCCTGTTTGGAGCATCTGATCTGTAGAAGACGAATCTTCACTGTGCCATGGAGATGTTCTGGGAGGGAGAGCCGGCCCAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.7
ENST00000533211.6
ENST00000611817.5
ENST00000647510.2
CDS TCA 90 bp GGGGGTTGGCCTTCAGTAACTGCTCGGCAATGTCATTCACCGCGGTaGTTTGTGCTGCAAGGGTGTTCATTTCAGGCTCCAGGGTCTCGA +
Preference number: 5 (lower is better)
Translates to: GGWPSVTARQCHSPR*FVLQGCSFQAPGSR
Trigger: TCGAGACCCTGGAGCCTGAAATGAACACCCTTGCAGCACAAATCACCGCGGTGAATGACATTGCCGAGCAGTTACTGAAGGCCAACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 90 bp TCTCCTCCCATCCCGAGAGCACTGTTCCCTGTTCCTACCCCAGCTTaGAGACATGTTTGCGCTTTCGGTAATCAAAGGCGACGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: SPPIPRALFPVPTPA*RHVCAFGNQRRRCP
Trigger: AGGGCAGCGTCGCCTTTGATTACCGAAAGCGCAAACATGTCTTCAAGCTGGGGTAGGAACAGGGAACAGTGCTCTCGGGATGGGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530775.1
CDS-3UTR CAA 90 bp AAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCTGCACTTTCTGCTCCTaGAGGAACTGCAGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: KLSCLITSLARLKAVAVPCTFCS*RNCSAL
Trigger: CAAGGCACTGCAGTTCCTCAAGGAGCAGAAAGTGCA...GGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACATGGATCCGTTCCCCATaGGCGTCCATGGTGCTCATG +
Preference number: 5 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATWIRSP*ASMVLM
Trigger: CATGAGCACCATGGACGCCAATGGGGAACGGATCCA...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCTTGTCGGCGTGGATGTaGCCTTCAGATACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: EKLSCLITSLARLKAVAVLSAWM*PSDTSW
Trigger: CCAGCTGGTATCTGAAGGCAACATCCACGCCGACAA...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCAGCTCGTGACAATCTaGCAGGAAATGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: EAELFNHLLGQTQGGGCPQLVTI*QEMLLL
Trigger: GAGCAGCAGCATTTCCTGCAAGATTGTCACGAGCTG...GGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGACCTTCCTTGTCCACCTaGTCCAGCCAGTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRPSLST*SSQSLL
Trigger: CAACAAAGACTGGCTGGACAAGGTGGACAAGGAAGG...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGTTCTTGAGCAGGATGTaGACGCTGGTGAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGFLSRM*TLVRSL
Trigger: CAAGGACCTCACCAGCGTCAACATCCTGCTCAAGAA...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GTTGATCAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTAGGCCGGCATACAGCTaGTCCACCTGGGCTTGGCGG +
Preference number: 5 (lower is better)
Translates to: VDQFIGTCHFSDPCLRSLRPAYS*STWAWR
Trigger: CCGCCAAGCCCAGGTGGACAAGCTGTATGCCGGCCT...AAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTGATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAAGTTCCCGGACAGCCTaGAAGAAGCGGAACTTGTCT +
Preference number: 5 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGSSRTA*KKRNLS
Trigger: AGACAAGTTCCGCTTCTTCAAGGCTGTCCGGGAACT...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGACCACCTGGGAAGCCTTaGTCCCTATTCTGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGPPGKP*SLFCFS
Trigger: GGAAAAGCAGAATAGGGACAAAGGCTTCCCAGGTGG...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGACCCAGGCTTGCCAGCTaGGAGTGCAAATACCTAGAT +
Preference number: 5 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGPRLAS*ECKYLD
Trigger: ATCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGG...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS CCA 90 bp CTCCTTCAGGCAGCTGGGCCGGCTCTCCCTCCCAGAACATCTCCATaGCACAGTGAAGATTCGTCTTCTACAGATCAGATGCTCCAAACA +
Preference number: 5 (lower is better)
Translates to: LLQAAGPALPPRTSP*HSEDSSSTDQMLQT
Trigger: TGTTTGGAGCATCTGATCTGTAGAAGACGAATCTTCACTGTGCCATGGAGATGTTCTGGGAGGGAGAGCCGGCCCAGCTGCCTGAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.7
ENST00000533211.6
ENST00000611817.5
ENST00000647510.2
CDS-3UTR CAA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACGCCGAGCTGCTGTCATaGTCCCAGTCCGAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: VDNACPYCRTASIGCPIYAELLS*SQSESG
Trigger: TCCTGACTCGGACTGGGACAATGACAGCAGCTCGGC...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACTCGGGATCCAGCAGCTaGGTAAGTCCCAGTTCCTTT +
Preference number: 5 (lower is better)
Translates to: THLEAIESSWRWSGSWSYSGSSS*VSPSSF
Trigger: AAAGGAACTGGGACTTACCAAGCTGCTGGATCCCGA...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCAGCTGCTCCTGGGTGTaGACAATGCGGTCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAASCSWV*TMRSLP
Trigger: AGGCAAAGACCGCATTGTCAACACCCAGGAGCAGCT...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCTTCCTTGTCCACCTaGTCCAGCCAGTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: EKLSCLITSLARLKAVAVPSLST*SSQSLL
Trigger: CAACAAAGACTGGCTGGACAAGGTGGACAAGGAAGG...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACCCAGCAATGAGCCCATaGGCCAGCGCATTGGCGCTA +
Preference number: 5 (lower is better)
Translates to: VDNACPYCRTASIGCPIYPAMSP*ASALAL
Trigger: TAGCGCCAATGCGCTGGCCAATGGGCTCATTGCTGG...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCGCATCCATCTGCAGGTaGACCTCATCCATCCAGAGC +
Preference number: 5 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAAASICR*TSSIQS
Trigger: GCTCTGGATGGATGAGGTCAACCTGCAGATGGATGC...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGAGCCTCCATCTCCTGCTaGCGGCACAGCATCCCCTCC +
Preference number: 5 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGASISC*RHSIPS
Trigger: GGAGGGGATGCTGTGCCGCAAGCAGGAGATGGAGGC...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp CTCCCCACATGGCCTATGTTGAGGGTGCGGCACTGTCCACACCGTGGTGAGGGAATCTCTGCCTCATCCTaGGCCTGGAATAAATATTCT +
Preference number: 5 (lower is better)
Translates to: LPTWPMLRVRHCPHRGEGISASS*AWNKYS
Trigger: AGAATATTTATTCCAGGCCAAGGATGAGGCAGAGAT...TCCCTCACCACGGTGTGGACAGTGCCGCACCCTCAACATAGGCCATGTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTATGTGCTCCGCTCTCCTaGTGGCCAGAGGCTGCGGTT +
Preference number: 5 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLCAPLS*WPEAAV
Trigger: AACCGCAGCCTCTGGCCACAAGGAGAGCGGAGCACA...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp ACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGAGTGGCAGCTGGAGTTACGGGTTTCTCCTTGGTTaGTTAGCGTCTGAGTGGTCT +
Preference number: 5 (lower is better)
Translates to: THLEAIESSWRWSGSWSYGFLLG*LASEWS
Trigger: AGACCACTCAGACGCTAACAAACCAAGGAGAAACCC...GTAACTCCAGCTGCCACTCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp TTCAGCTCTGAGAGGTTCCTGGCTGGTCTGAGGGGTGAGGAACCAGAAGGCAGACTCCACACTGATGTCTaGGATCTGGAATCGAAGGAT +
Preference number: 5 (lower is better)
Translates to: FSSERFLAGLRGEEPEGRLHTDV*DLESKD
Trigger: ATCCTTCGATTCCAGATCCAAGACATCAGTGTGGAG...TCTGCCTTCTGGTTCCTCACCCCTCAGACCAGCCAGGAACCTCTCAGAGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTAGAAGCAGGGCATCCTaGGCTGACTTCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: REAELFNHLLGQTQGGGCRSRAS*ADFFSL
Trigger: CAAGGAGAAGAAGTCAGCCAAGGATGCCCTGCTTCT...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp AGAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTTCGGGATCCAGCAGCTaGGTAAGTCCCAGTTCCTTT +
Preference number: 5 (lower is better)
Translates to: REAELFNHLLGQTQGGGCSGSSS*VSPSSF
Trigger: AAAGGAACTGGGACTTACCAAGCTGCTGGATCCCGA...ACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATAGCCAACTGCCGGTCATaGAGGGTCACGATCGTTTGC +
Preference number: 5 (lower is better)
Translates to: PIIVSLQCPQACQLGVQIANCRS*RVTIVC
Trigger: GCAAACGATCGTGACCCTCAATGACCGGCAGTTGGC...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTACGCTCCCAAGCCTTGTaGATGTCCGAGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLRSQAL*MSEMSR
Trigger: CCGGCTCATCTCGGACATCAACAAGGCTTGGGAGCG...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp CTGTGGATGGAAAGACCCTCAATCAGCTTCAAGGACACTGTGCTGAGTTGGCCGAGCATCTGCTGCTTCTaGAGCAGGATGTTGACGCTG +
Preference number: 5 (lower is better)
Translates to: LWMERPSISFKDTVLSWPSICCF*SRMLTL
Trigger: CAGCGTCAACATCCTGCTCAAGAAGCAGCAGATGCT...CGGCCAACTCAGCACAGTGTCCTTGAAGCTGATTGAGGGTCTTTCCATCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CAA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCATGCCTTGCTGGTTCTaGATGACTAGATCCGCGGAG +
Preference number: 5 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAAMPCWF*MTRSAE
Trigger: CTCCGCGGATCTAGTCATCAAGAACCAGCAAGGCAT...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCCCCGACTTGCCCCCAACTACTaGTTCTTCTTAAAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: AELFNHLLGQTQGGGCPRLAPNY*FFLKKL
Trigger: CAGCTTCTTTAAGAAGAACAAGTAGTTGGGGGCAAG...TCGGGGACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GTGGCTGTCCCCGAACAACACACCTGGAAGCCATTGAGAGCAGCTGGAGATGGATGCCATCTCTCTCCATaGATTTGTGCTGCCTGCATT +
Preference number: 5 (lower is better)
Translates to: VAVPEQHTWKPLRAAGDGCHLSP*ICAACI
Trigger: AATGCAGGCAGCACAAATCAATGGAGAGAGATGGCA...TCCATCTCCAGCTGCTCTCAATGGCTTCCAGGTGTGTTGTTCGGGGACAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCGACTTCTTCTCCTTGTaGTCTTCTGTCTCCACACTG +
Preference number: 5 (lower is better)
Translates to: EKLSCLITSLARLKAVAVDFFSL*SSVSTL
Trigger: CAGTGTGGAGACAGAAGACAACAAGGAGAAGAAGTC...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp CCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGAACAATTCACCGCGGTGATTaGTGCTGCAAGGGTGTTCAT +
Preference number: 5 (lower is better)
Translates to: PTTSLELNSRREGLPLGTIHRGD*CCKGVH
Trigger: ATGAACACCCTTGCAGCACAAATCACCGCGGTGAAT...TGTTCCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GAGAAGCTGAGCTGTTTAATCACCTCCTTGGCCAGACTCAAGGCGGTGGCTGTCGAGAACTCTCGGAATTaGTCTCGGAGCATAGTCACA +
Preference number: 5 (lower is better)
Translates to: EKLSCLITSLARLKAVAVENSRN*SRSIVT
Trigger: TGTGACTATGCTCCGAGACAAATTCCGAGAGTTCTC...GACAGCCACCGCCTTGAGTCTGGCCAAGGAGGTGATTAAACAGCTCAGCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp GGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCTTGGGCTGTTGATCAGTTTATaGGAACCTGCCACTTCTCAG +
Preference number: 5 (lower is better)
Translates to: GSHHQSGIKQQKRRAALGLLISL*EPATSQ
Trigger: CTGAGAAGTGGCAGGTTCCAATAAACTGATCAACAG...CCCAAGGGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACAGTCTCACCTCTCCGTaGACAATGCCTGCCCCTACT +
Preference number: 5 (lower is better)
Translates to: VDNACPYCRTASIGCPIYSLTSP*TMPAPT
Trigger: AGTAGGGGCAGGCATTGTCAACGGAGAGGTGAGACT...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp AACATGGACTCGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACCTTGGCAACATTATGCACGATGGCGTaGAAAGCTAGTCCATCTCTC +
Preference number: 5 (lower is better)
Translates to: NMDSSPVTVPGDGLTLATLCTMA*KASPSL
Trigger: GAGAGATGGACTAGCTTTCAACGCCATCGTGCATAA...TGTTGCCAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACGAGTCCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529997.5
ENST00000533211.6
CDS-3UTR CAA 90 bp ATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACCTAGAATTCACCGCGGTGATTaGTGCTGCAAGGGTGTTCAT +
Preference number: 5 (lower is better)
Translates to: IVSLQCPQACQLGVQIPRIHRGD*CCKGVH
Trigger: ATGAACACCCTTGCAGCACAAATCACCGCGGTGAAT...TCTAGGTATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp GTTGACAATGCCTGCCCCTACTGCAGGACTGCTTCAATTGGCTGTCCTATTTACTTGCTGCGCTGCGTCTaGATTCTTCTTGTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: VDNACPYCRTASIGCPIYLLRCV*ILLVPP
Trigger: AGGAGGCACAAGAAGAATCAAGACGCAGCGCAGCAA...GTAAATAGGACAGCCAATTGAAGCAGTCCTGCAGTAGGGGCAGGCATTGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTGTAGTCGGCCAGGGCTaGCTCCAGCACCTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVVVGQG*LQHLVL
Trigger: AAGCACCAGGTGCTGGAGCAAGCCCTGGCCGACTAC...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATAATGCCTTGCTGGTTCTaGATGACTAGATCCGCGGAG +
Preference number: 5 (lower is better)
Translates to: PIIVSLQCPQACQLGVQIMPCWF*MTRSAE
Trigger: CTCCGCGGATCTAGTCATCAAGAACCAGCAAGGCAT...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp GTTGATCAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTAACACGCTTTTCCTGTaGGAGGCCACCAAGGAGTGC +
Preference number: 5 (lower is better)
Translates to: VDQFIGTCHFSDPCLRSLNTLFL*EATKEC
Trigger: GCACTCCTTGGTGGCCTCCAACAGGAAAAGCGTGTT...AAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTGATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGATCAGTGCCCCCAGGCTaGCCAGCTTGGAGTGCAAAT +
Preference number: 5 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGSVPPG*PAWSAN
Trigger: ATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGA...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCCAGCTCACCTCATCCTaGGCCTGGAATAAATATTCT +
Preference number: 5 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAAQLTSS*AWNKYS
Trigger: AGAATATTTATTCCAGGCCAAGGATGAGGTGAGCTG...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529997.5
CDS-3UTR CAA 90 bp TTACCTGGGTCCCACCACCAGTCTGGAATTAAACAGCAGAAGAGAAGGGCTGCCGCAGGACTGCTTCAATaGGCTGTCCTATTTACACTT +
Preference number: 5 (lower is better)
Translates to: LPGSHHQSGIKQQKRRAAAGLLQ*AVLFTL
Trigger: AAGTGTAAATAGGACAGCCAATTGAAGCAGTCCTGC...GGCAGCCCTTCTCTTCTGCTGTTTAATTCCAGACTGGTGGTGGGACCCAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp GTGAAGAAAATTGTGCACCAGGGAAGGAGTCCCTCATTGCTTTTTAACATGAATCCTGACCGATGGTGCTaGTGTCCCGGGAGAACTCTC +
Preference number: 5 (lower is better)
Translates to: VKKIVHQGRSPSLLFNMNPDRWC*CPGRTL
Trigger: GAGAGTTCTCCCGGGACACAAGCACCATCGGTCAGG...ATTCATGTTAAAAAGCAATGAGGGACTCCTTCCCTGGTGCACAATTTTCTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp CAGTTTATTGGAACCTGCCACTTCTCAGATCCCTGTCTGAGGTCCCTTGATCTAGAGAACTCTCGGAATTaGTCTCGGAGCATAGTCACA +
Preference number: 5 (lower is better)
Translates to: QFIGTCHFSDPCLRSLDLENSRN*SRSIVT
Trigger: TGTGACTATGCTCCGAGACAAATTCCGAGAGTTCTC...TAGATCAAGGGACCTCAGACAGGGATCTGAGAAGTGGCAGGTTCCAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp CCAATTATTGTTTCCCTTCAGTGCCCCCAGGCTTGCCAGCTTGGAGTGCAAATACATGAATACTGCTTGTaGACATCATCCCAACCCATG +
Preference number: 5 (lower is better)
Translates to: PIIVSLQCPQACQLGVQIHEYCL*TSSQPM
Trigger: CATGGGTTGGGATGATGTCAACAAGCAGTATTCATG...TATTTGCACTCCAAGCTGGCAAGCCTGGGGGCACTGAAGGGAAACAATAATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS GCA 90 bp GAACATCTCCATGGCACAGTGAAGATTCGTCTTCTACAGATCAGATaGTCCAAACAGGCATCTCAGCGCTTCTCAGCTCCTCTCATTTAT +
Preference number: 5 (lower is better)
Translates to: EHLHGTVKIRLLQIR*SKQASQRFSAPLIY
Trigger: ATAAATGAGAGGAGCTGAGAAGCGCTGAGATGCCTGTTTGGAGCATCTGATCTGTAGAAGACGAATCTTCACTGTGCCATGGAGATGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.7
ENST00000533211.6
ENST00000611817.5
ENST00000647510.2
CDS-3UTR CAA 90 bp ATGACTAAAGATGGGGCTGCCTTCCTGGAAAAACGGTTGTCTGTGTGTATAGGACTTGCCCCCAACTACTaGTTCTTCTTAAAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: MTKDGAAFLEKRLSVCIGLAPNY*FFLKKL
Trigger: CAGCTTCTTTAAGAAGAACAAGTAGTTGGGGGCAAG...TCCTATACACACAGACAACCGTTTTTCCAGGAAGGCAGCCCCATCTTTAGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGGGAAGGAGTCCCTCATaGCTTTTTAACATGAATACT +
Preference number: 5 (lower is better)
Translates to: TRDKGEATRSFLILHQIQGRSPS*LFNMNT
Trigger: AGTATTCATGTTAAAAAGCAATGAGGGACTCCTTCC...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp ACCAGAGACAAAGGAGAAGCCACCCGCTCCTTTCTAATACTTCATCAGATCCAGTGTATATTTACATGCTaGGGCTGTAAAGTCACCTCA +
Preference number: 5 (lower is better)
Translates to: TRDKGEATRSFLILHQIQCIFTC*GCKVTS
Trigger: TGAGGTGACTTTACAGCCCAAGCATGTAAATATACA...CTGGATCTGATGAAGTATTAGAAAGGAGCGGGTGGCTTCTCCTTTGTCTCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS-3UTR CAA 90 bp ATTCTTCCACTTAGTCCCATGACAGATTGTTCTAGTTACGCGTATCCACCTGTTAGGTATTTAAAGTTGTaGTCCTCTTCCATGCTTCAT +
Preference number: 5 (lower is better)
Translates to: ILPLSPMTDCSSYAYPPVRYLKL*SSSMLH
Trigger: ATGAAGCATGGAAGAGGACAACAACTTTAAATACCT...AACAGGTGGATACGCGTAACTAGAACAATCTGTCATGGGACTAAGTGGAAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533211.6
CDS GCA 72 bp CCCGGCCTCGCTGAGCATGGTGTAGAGCGCCAGGGCTaGCTCCAAGGCCCGCGCTCGCTCGCCTGCCCGGGC +
Preference number: 6 (lower is better)
Translates to: PGLAEHGVERQG*LQGPRSLACPG
Trigger: GCCCGGGCAGGCGAGCGAGCGCGGGCCTTGGAGGCAGCCCTGGCGCTCTACACCATGCTCAGCGAGGCCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp TCATCCAGCTCGCGGCGGAGCTGGCACAGCCGGAGGTaGTCCTGCAGGCGCTCCCGCCGCTCTCCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: SSSSRRSWHSRR*SCRRSRRSPAS
Trigger: GCTGGCTGGAGAGCGGCGGGAGCGCCTGCAGGAGCACCTCCGGCTGTGCCAGCTCCGCCGCGAGCTGGATGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp TTGTGCTGCACCCGCGCCAGGGCTTGGCGTGCCCCGTaGAGGAAGCGCTGCAGCTCGTACGCCGCGGCCAGC +
Preference number: 6 (lower is better)
Translates to: LCCTRARAWRAP*RKRCSSYAAAS
Trigger: GCTGGCCGCGGCGTACGAGCTGCAGCGCTTCCTGCACGGGGCACGCCAAGCCCTGGCGCGGGTGCAGCACAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp CGGCCAGTCCCGTCCGGAAGCTGCTGCTGCTTGTGCTaGACCCGCGCCAGGGCTTGGCGTGCCCCGTGCAGG +
Preference number: 6 (lower is better)
Translates to: RPVPSGSCCCLC*TRARAWRAPCR
Trigger: CCTGCACGGGGCACGCCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGACGGGACTGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp TCGCGGCCAGTCCCGTCCGGAAGCTGCTGCTGCTTGTaGTGCACCCGCGCCAGGGCTTGGCGTGCCCCGTGC +
Preference number: 6 (lower is better)
Translates to: SRPVPSGSCCCL*CTRARAWRAPC
Trigger: GCACGGGGCACGCCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGACGGGACTGGCCGCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp TCTTCCCCGCCCCGAACCTCCCACCTGCGGGCCCACTaGCACCCGCGGCGCTCAGAGGCTCTAGGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: SSPPRTSHLRAH*HPRRSEALGGS
Trigger: GGAGCCACCTAGAGCCTCTGAGCGCCGCGGGTGCCAGTGGGCCCGCAGGTGGGAGGTTCGGGGCGGGGAAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611817.5
CDS CAA 90 bp CCCGTCCGGAAGCTGCTGCTGCTTGTGCTGCACCCGCGCCAGGGCTaGGCGTGCCCCGTGCAGGAAGCGCTGCAGCTCGTACGCCGCGGC +
Preference number: 6 (lower is better)
Translates to: PVRKLLLLVLHPRQG*ACPVQEALQLVRRG
Trigger: GCCGCGGCGTACGAGCTGCAGCGCTTCCTGCACGGGGCACGCCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGACGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp CTGCTGCTTGTGCTGCACCCGCGCCAGGGCTTGGCGTaGCCCGTGCAGGAAGCGCTGCAGCTCGTACGCCGC +
Preference number: 6 (lower is better)
Translates to: LLLVLHPRQGLA*PVQEALQLVRR
Trigger: GCGGCGTACGAGCTGCAGCGCTTCCTGCACGGGGCACGCCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp TTGCCTCTCGAGTCAGTTCGCCCACCCGGGCGGCGATaGCCTCCAGGTCCCGCTCCGTGCCGGCCAGCTTGC +
Preference number: 6 (lower is better)
Translates to: LPLESVRPPGRR*PPGPAPCRPAC
Trigger: GCAAGCTGGCCGGCACGGAGCGGGACCTGGAGGCCATCGCCGCCCGGGTGGGCGAACTGACTCGAGAGGCAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 90 bp GCAGCGTTGAGGTCGCGGCCAGTCCCGTCCGGAAGCTGCTGCTGCTaGTGCTGCACCCGCGCCAGGGCTTGGCGTGCCCCGTGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: AALRSRPVPSGSCCC*CCTRARAWRAPCRK
Trigger: CTTCCTGCACGGGGCACGCCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGACGGGACTGGCCGCGACCTCAACGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 72 bp TTCACCCACCTCCCAGAGGAAACGCCAGAGCCGCCGTaGTTCCTCCAGCCGGGCCCGCCGCGCCGCTGCCAA +
Preference number: 6 (lower is better)
Translates to: FTHLPEETPEPP*FLQPGPPRRCQ
Trigger: TTGGCAGCGGCGCGGCGGGCCCGGCTGGAGGAATCACGGCGGCTCTGGCGTTTCCTCTGGGAGGTGGGTGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 72 bp CCTCCCAGCCGGTCTGCACCTCTCTCAGCCGGGCGTTaGTGGCCACTGCCTGAGCGGGATGGCCGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: PPSRSAPLSAGR*WPLPERDGRQP
Trigger: TGGCTGCCGGCCATCCCGCTCAGGCAGTGGCCATCAACGCCCGGCTGAGAGAGGTGCAGACCGGCTGGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 72 bp AGGCACAGTGTCGGCGCTGCAGGGCCTCGGCAGCGTTaGGGTCGCGGCCAGTCCCGTCCGGAAGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: RHSVGAAGPRQR*GRGQSRPEAAA
Trigger: AGCAGCAGCTTCCGGACGGGACTGGCCGCGACCTCAACGCTGCCGAGGCCCTGCAGCGCCGACACTGTGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp CGCCGCATGGTGGCCCTGAGGTCCTCCCAGCCGGTCTaGACCTCTCTCAGCCGGGCGTTGATGGCCACTGCC +
Preference number: 6 (lower is better)
Translates to: RRMVALRSSQPV*TSLSRALMATA
Trigger: GGCAGTGGCCATCAACGCCCGGCTGAGAGAGGTGCAGACCGGCTGGGAGGACCTCAGGGCCACCATGCGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp TTGAGGTCGCGGCCAGTCCCGTCCGGAAGCTGCTGCTaGTTGTGCTGCACCCGCGCCAGGGCTTGGCGTGCC +
Preference number: 6 (lower is better)
Translates to: LRSRPVPSGSCC*LCCTRARAWRA
Trigger: GGCACGCCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGACGGGACTGGCCGCGACCTCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp GCGTTGAGGTCGCGGCCAGTCCCGTCCGGAAGCTGCTaGTGCTTGTGCTGCACCCGCGCCAGGGCTTGGCGT +
Preference number: 6 (lower is better)
Translates to: ALRSRPVPSGSC*CLCCTRARAWR
Trigger: ACGCCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGACGGGACTGGCCGCGACCTCAACGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp GCAGCGTTGAGGTCGCGGCCAGTCCCGTCCGGAAGCTaGTGCTGCTTGTGCTGCACCCGCGCCAGGGCTTGG +
Preference number: 6 (lower is better)
Translates to: AALRSRPVPSGS*CCLCCTRARAW
Trigger: CCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCTTCCGGACGGGACTGGCCGCGACCTCAACGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp GCACGCTCCTCGGCCAGGGCCTCTAGCCGCTCCCACTaGGCTTGGAGTTCAGCTGCACGGGCAGAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: ARSSARASSRSH*AWSSAARAEAW
Trigger: CCAGGCCTCTGCCCGTGCAGCTGAACTCCAAGCCCAGTGGGAGCGGCTAGAGGCCCTGGCCGAGGAGCGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp TCCTCGCCCAGGGCTCGCAGCCGGCTATACTCGCTCTaGGCCCGCTCCACCTCTCCCCGCAGGGCTGCATGT +
Preference number: 6 (lower is better)
Translates to: SSPRARSRLYSL*ARSTSPRRAAC
Trigger: ACATGCAGCCCTGCGGGGAGAGGTGGAGCGGGCCCAGAGCGAGTATAGCCGGCTGCGAGCCCTGGGCGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp CCCAGGGCCTCCAGTCGCTGTCGTAGGAAGAGGCACTaGGGGTCAGCCTGGTCCCGGGTCACCTCCTCGCCC +
Preference number: 6 (lower is better)
Translates to: PRASSRCRRKRH*GSAWSRVTSSP
Trigger: GGGCGAGGAGGTGACCCGGGACCAGGCTGACCCCCAGTGCCTCTTCCTACGACAGCGACTGGAGGCCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp CTGTCTGGCCGCCCACCAGGTCCCCTGGAGGCACACTaGCTGTGGGTTCGGGAGCAGGCGGCTGTTTCCGCC +
Preference number: 6 (lower is better)
Translates to: LSGRPPGPLEAH*LWVREQAAVSA
Trigger: GGCGGAAACAGCCGCCTGCTCCCGAACCCACAGCCAGTGTGCCTCCAGGGGACCTGGTGGGCGGCCAGACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000532650.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp GCCTTCTGGAGCCGGTGGCCGTCGTCCTGCACCTGCTaGACCTGCGGAGCCCCGGGTCAGAGTCAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: AFWSRWPSSCTC*TCGAPGQSQAE
Trigger: CTCTGCCTGACTCTGACCCGGGGCTCCGCAGGTCCAGCAGGTGCAGGACGACGGCCACCGGCTCCAGAAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532902.1
CDS CAA 72 bp CCACTGCCTGAGCGGGATGGCCGGCAGCCAGGGCATTaGCCTCTCGAGTCAGTTCGCCCACCCGGGCGGCGA +
Preference number: 6 (lower is better)
Translates to: PLPERDGRQPGH*PLESVRPPGRR
Trigger: TCGCCGCCCGGGTGGGCGAACTGACTCGAGAGGCAAATGCCCTGGCTGCCGGCCATCCCGCTCAGGCAGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 72 bp GCCGTGCCACGTTGTGCTGCCGAGCGGCGATGCGCTTaGTGTCGTGGTAGCGCTCGGCGGCCAGCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: AVPRCAAERRCA*CRGSARRPALQ
Trigger: CTGCAGAGCTGGCCGCCGAGCGCTACCACGACATCAAGCGCATCGCCGCTCGGCAGCACAACGTGGCACGGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp TTGAGGAGGAGCCGCTCCCGCCGGGCGGCCACCATCTaGCGCAAGAAGTCCCAGAGCCGTGCCACGTTGTGC +
Preference number: 6 (lower is better)
Translates to: LRRSRSRRAATI*RKKSQSRATLC
Trigger: GCACAACGTGGCACGGCTCTGGGACTTCTTGCGGCAGATGGTGGCCGCCCGGCGGGAGCGGCTCCTCCTCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp TGCTGCCTGGCTAGAGCCTGCGTGGAGAACTCGTCGTaGCCCAGCTCGGGGCTGGACACCAGGCGCAGTGCG +
Preference number: 6 (lower is better)
Translates to: CCLARACVENSS*PSSGLDTRRSA
Trigger: CGCACTGCGCCTGGTGTCCAGCCCCGAGCTGGGGCACGACGAGTTCTCCACGCAGGCTCTAGCCAGGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp TCCTCCTCCAGGGCCCGATGCTGCCTGGCTAGAGCCTaGGTGGAGAACTCGTCGTGCCCCAGCTCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: SSSRARCCLARA*VENSSCPSSGL
Trigger: CAGCCCCGAGCTGGGGCACGACGAGTTCTCCACGCAGGCTCTAGCCAGGCAGCATCGGGCCCTGGAGGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp CACTGCCTGAGCGGGATGGCCGGCAGCCAGGGCATTTaGCTCTCGAGTCAGTTCGCCCACCCGGGCGGCGAT +
Preference number: 6 (lower is better)
Translates to: HCLSGMAGSQGI*LSSQFAHPGGD
Trigger: ATCGCCGCCCGGGTGGGCGAACTGACTCGAGAGGCAAATGCCCTGGCTGCCGGCCATCCCGCTCAGGCAGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp AATCCCTGGAAGCCGTGGGCCTGGGCCAGGCGACCTTaGCGGCTCTCCCACATTCGGCCCAGCTCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: NPWKPWAWARRP*RLSHIRPSSSQ
Trigger: CTGGGAGGAGCTGGGCCGAATGTGGGAGAGCCGGCAAGGTCGCCTGGCCCAGGCCCACGGCTTCCAGGGATT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp CCTCCAGGGCCCGATGCTGCCTGGCTAGAGCCTGCGTaGAGAACTCGTCGTGCCCCAGCTCGGGGCTGGACA +
Preference number: 6 (lower is better)
Translates to: PPGPDAAWLEPA*RTRRAPARGWT
Trigger: TGTCCAGCCCCGAGCTGGGGCACGACGAGTTCTCCACGCAGGCTCTAGCCAGGCAGCATCGGGCCCTGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp GAAGCCTGCAGGCGCCGGCAGCGTTCCCGCATGGGCTaGCACAAGGCCCTGAACTTCTCCTCCACGGCCCTC +
Preference number: 6 (lower is better)
Translates to: EACRRRQRSRMG*HKALNFSSTAL
Trigger: GAGGGCCGTGGAGGAGAAGTTCAGGGCCTTGTGCCAGCCCATGCGGGAACGCTGCCGGCGCCTGCAGGCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp ATCCACTGTTCCAGGTCATCCAGCTCGCGGCGGAGCTaGCACAGCCGGAGGTGCTCCTGCAGGCGCTCCCGC +
Preference number: 6 (lower is better)
Translates to: IHCSRSSSSRRS*HSRRCSCRRSR
Trigger: GCGGGAGCGCCTGCAGGAGCACCTCCGGCTGTGCCAGCTCCGCCGCGAGCTGGATGACCTGGAACAGTGGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp AGCTGCTGCTGCTTGTGCTGCACCCGCGCCAGGGCTTaGCGTGCCCCGTGCAGGAAGCGCTGCAGCTCGTAC +
Preference number: 6 (lower is better)
Translates to: SCCCLCCTRARA*RAPCRKRCSSY
Trigger: GTACGAGCTGCAGCGCTTCCTGCACGGGGCACGCCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp GGTGTCAGAAGCTGTCTGGCCGCCCACCAGGTCCCCTaGAGGCACACTGGCTGTGGGTTCGGGAGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: GVRSCLAAHQVP*RHTGCGFGSRR
Trigger: CCGCCTGCTCCCGAACCCACAGCCAGTGTGCCTCCAGGGGACCTGGTGGGCGGCCAGACAGCTTCTGACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000532650.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp AGGGTGGCAGCATGGGCTGACTCGGTAGACCTGCTCTaGGGCATTGCAGATGGGGCCGGGCCCCGAGTCCGG +
Preference number: 6 (lower is better)
Translates to: RVAAWADSVDLL*GIADGAGPRVR
Trigger: CCGGACTCGGGGCCCGGCCCCATCTGCAATGCCCCAGAGCAGGTCTACCGAGTCAGCCCATGCTGCCACCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp GGTCTGCACCTCTCTCAGCCGGGCGTTGATGGCCACTaGCTGAGCGGGATGGCCGGCAGCCAGGGCATTTGC +
Preference number: 6 (lower is better)
Translates to: GLHLSQPGVDGH*LSGMAGSQGIC
Trigger: GCAAATGCCCTGGCTGCCGGCCATCCCGCTCAGGCAGTGGCCATCAACGCCCGGCTGAGAGAGGTGCAGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp CCCGTCCCCTCGCTCTCGCGTCCTCCTTCAGGCAGCTaGGCCGGCTCTCCCTCCCAGAACATCTCCATGGCA +
Preference number: 6 (lower is better)
Translates to: PVPSLSRPPSGS*AGSPSQNISMA
Trigger: TGCCATGGAGATGTTCTGGGAGGGAGAGCCGGCCCAGCTGCCTGAAGGAGGACGCGAGAGCGAGGGGACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309996.7
ENST00000533211.6
ENST00000611817.5
ENST00000647510.2
CDS CCA 72 bp CCTGCGTGGAGAACTCGTCGTGCCCCAGCTCGGGGCTaGACACCAGGCGCAGTGCGTCAACCAACCAGGCCT +
Preference number: 6 (lower is better)
Translates to: PAWRTRRAPARG*TPGAVRQPTRP
Trigger: AGGCCTGGTTGGTTGACGCACTGCGCCTGGTGTCCAGCCCCGAGCTGGGGCACGACGAGTTCTCCACGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp CAGGGCTGCTGCCTGTTCCCTCAAGGCGTCCAGGGTTaGCCGGTGGCTTCGAATCTCCTCCTCCAGGGCCCG +
Preference number: 6 (lower is better)
Translates to: QGCCLFPQGVQG*PVASNLLLQGP
Trigger: CGGGCCCTGGAGGAGGAGATTCGAAGCCACCGGCCAACCCTGGACGCCTTGAGGGAACAGGCAGCAGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 72 bp GCAGGGCTGCTGCCTGTTCCCTCAAGGCGTCCAGGGTaGGCCGGTGGCTTCGAATCTCCTCCTCCAGGGCCC +
Preference number: 6 (lower is better)
Translates to: AGLLPVPSRRPG*AGGFESPPPGP
Trigger: GGGCCCTGGAGGAGGAGATTCGAAGCCACCGGCCAACCCTGGACGCCTTGAGGGAACAGGCAGCAGCCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 72 bp AAGCTGCTGCTGCTTGTGCTGCACCCGCGCCAGGGCTaGGCGTGCCCCGTGCAGGAAGCGCTGCAGCTCGTA +
Preference number: 6 (lower is better)
Translates to: KLLLLVLHPRQG*ACPVQEALQLV
Trigger: TACGAGCTGCAGCGCTTCCTGCACGGGGCACGCCAAGCCCTGGCGCGGGTGCAGCACAAGCAGCAGCAGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 72 bp TGCACCTCTCTCAGCCGGGCGTTGATGGCCACTGCCTaGGCGGGATGGCCGGCAGCCAGGGCATTTGCCTCT +
Preference number: 6 (lower is better)
Translates to: CTSLSRALMATA*AGWPAARAFAS
Trigger: AGAGGCAAATGCCCTGGCTGCCGGCCATCCCGCTCAGGCAGTGGCCATCAACGCCCGGCTGAGAGAGGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 72 bp CTCTGGGCCTCGAGGCGGCAGGGTGGCAGCATGGGCTaGCTCGGTAGACCTGCTCTGGGGCATTGCAGATGG +
Preference number: 6 (lower is better)
Translates to: LWASRRQGGSMG*LGRPALGHCRW
Trigger: CCATCTGCAATGCCCCAGAGCAGGTCTACCGAGTCAGCCCATGCTGCCACCCTGCCGCCTCGAGGCCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp GGCCGGTGGCTTCGAATCTCCTCCTCCAGGGCCCGATaGTGCCTGGCTAGAGCCTGCGTGGAGAACTCGTCG +
Preference number: 6 (lower is better)
Translates to: GRWLRISSSRAR*CLARACVENSS
Trigger: CGACGAGTTCTCCACGCAGGCTCTAGCCAGGCAGCATCGGGCCCTGGAGGAGGAGATTCGAAGCCACCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp GCTGCCTGTTCCCTCAAGGCGTCCAGGGTTGGCCGGTaGCTTCGAATCTCCTCCTCCAGGGCCCGATGCTGC +
Preference number: 6 (lower is better)
Translates to: AACSLKASRVGR*LRISSSRARCC
Trigger: GCAGCATCGGGCCCTGGAGGAGGAGATTCGAAGCCACCGGCCAACCCTGGACGCCTTGAGGGAACAGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 90 bp CGCTCCCGCCGCTCTCCAGCCAGCTCCTTCAGGCCGGCATACAGCTaGTCCACCTGGGCTTGGCGGATGGATATCCGAGTGCTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: RSRRSPASSFRPAYS*STWAWRMDIRVLSG
Trigger: CCCAGAGAGCACTCGGATATCCATCCGCCAAGCCCAGGTGGACAAGCTGTATGCCGGCCTGAAGGAGCTGGCTGGAGAGCGGCGGGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp GTCGTGCCCCAGCTCGGGGCTGGACACCAGGCGCAGTaGGTCAACCAACCAGGCCTCCATGTCGTTTGCATC +
Preference number: 6 (lower is better)
Translates to: VVPQLGAGHQAQ*VNQPGLHVVCI
Trigger: GATGCAAACGACATGGAGGCCTGGTTGGTTGACGCACTGCGCCTGGTGTCCAGCCCCGAGCTGGGGCACGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp CCTGAGCCAGGTCCCGGCCCTTCGGGGAAGCTGCTGTaGTCAAGTCTCTGTTGTCCCAGCAGGGGCTGTGAG +
Preference number: 6 (lower is better)
Translates to: PEPGPGPSGKLL*SSLCCPSRGCE
Trigger: CTCACAGCCCCTGCTGGGACAACAGAGACTTGAGCACAGCAGCTTCCCCGAAGGGCCGGGACCTGGCTCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000532650.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp CAGCTGCTAGTTACAGAGCCCAGGGCCCAGAGTCCATaGTCCCCGCTGGCAGGGGGCCAGTTTCTGTTCCCC +
Preference number: 6 (lower is better)
Translates to: QLLVTEPRAQSP*SPLAGGQFLFP
Trigger: GGGGAACAGAAACTGGCCCCCTGCCAGCGGGGAGCATGGACTCTGGGCCCTGGGCTCTGTAACTAGCAGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617502.5
CDS CCA 72 bp GGCTTCGAATCTCCTCCTCCAGGGCCCGATGCTGCCTaGCTAGAGCCTGCGTGGAGAACTCGTCGTGCCCCA +
Preference number: 6 (lower is better)
Translates to: GFESPPPGPDAA*LEPAWRTRRAP
Trigger: TGGGGCACGACGAGTTCTCCACGCAGGCTCTAGCCAGGCAGCATCGGGCCCTGGAGGAGGAGATTCGAAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp CAATCATGTCCTGGCTGCTGGCCGCCAGCTGGTGGATaGTCTGCGCGTAGTCGGCCAGGGCTTGCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: QSCPGCWPPAGG*SARSRPGLAPA
Trigger: TGCTGGAGCAAGCCCTGGCCGACTACGCGCAGACCATCCACCAGCTGGCGGCCAGCAGCCAGGACATGATTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp GCACCCGGCCGCTGTAGGCCACGATGTCCGTCTCAATaGCTTCGTGCTTCCGTACTGCTGCCTCGACAGCTG +
Preference number: 6 (lower is better)
Translates to: APGRCRPRCPSQ*LRASVLLPRQL
Trigger: CAGCTGTCGAGGCAGCAGTACGGAAGCACGAAGCCATTGAGACGGACATCGTGGCCTACAGCGGCCGGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp CCAACTCGCACAGTGCCTCATAGCTCTGCTCTAGCTTaGCCACCCGCTCCGACACCAGCTGCGGGTCGCAAG +
Preference number: 6 (lower is better)
Translates to: PTRTVPHSSALA*PPAPTPAAGRK
Trigger: CTTGCGACCCGCAGCTGGTGTCGGAGCGGGTGGCCAAGCTAGAGCAGAGCTATGAGGCACTGTGCGAGTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp TCTCTGGGTGCTCGTGGTCAATCATGTCCTGGCTGCTaGCCGCCAGCTGGTGGATGGTCTGCGCGTAGTCGG +
Preference number: 6 (lower is better)
Translates to: SLGARGQSCPGC*PPAGGWSARSR
Trigger: CCGACTACGCGCAGACCATCCACCAGCTGGCGGCCAGCAGCCAGGACATGATTGACCACGAGCACCCAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp CTTCTCCGTGGTATGGCACTCCCGCGCTGGCTGCCTTaGCATCCTTGTAAAAGCCGAGGCTCCCACGCCGCA +
Preference number: 6 (lower is better)
Translates to: LLRGMALPRWLP*HPCKSRGSHAA
Trigger: TGCGGCGTGGGAGCCTCGGCTTTTACAAGGATGCCAAGGCAGCCAGCGCGGGAGTGCCATACCACGGAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000530775.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 90 bp CGCTCCTCCCAGGCCACTGCTGACTTCTGGAAGGCCTCGTGCCGCTaGATGAGGCTCTCAACTTCGTCGACCGTGCAACCCAGCTCAGCG +
Preference number: 6 (lower is better)
Translates to: RSSQATADFWKASCR*MRLSTSSTVQPSSA
Trigger: CGCTGAGCTGGGTTGCACGGTCGACGAAGTTGAGAGCCTCATCAAGCGGCACGAGGCCTTCCAGAAGTCAGCAGTGGCCTGGGAGGAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000532650.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 72 bp AGGTCCTCCACTCCTGCTAGGTGCCTGCCCAGGTCCTaGGACTGCAGCCGGCCCTTCATCTCTTCCATCCAG +
Preference number: 6 (lower is better)
Translates to: RSSTPARCLPRS*DCSRPFISSIQ
Trigger: CTGGATGGAAGAGATGAAGGGCCGGCTGCAGTCTCAGGACCTGGGCAGGCACCTAGCAGGAGTGGAGGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 72 bp CCATTGGCCAGCGCATTGGCGCTATCTACGCGCTCCTaGCCGATGGTGCTTGTGTCCCGGGAGAACTCTCGG +
Preference number: 6 (lower is better)
Translates to: PLASALALSTRS*PMVLVSRENSR
Trigger: CCGAGAGTTCTCCCGGGACACAAGCACCATCGGTCAGGAGCGCGTAGATAGCGCCAATGCGCTGGCCAATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp GCGCAGTGCGTCAACCAACCAGGCCTCCATGTCGTTTaGATCGGCCTGGAACTGGTAGAGGCTGGCGGCTTG +
Preference number: 6 (lower is better)
Translates to: AQCVNQPGLHVV*IGLELVEAGGL
Trigger: CAAGCCGCCAGCCTCTACCAGTTCCAGGCCGATGCAAACGACATGGAGGCCTGGTTGGTTGACGCACTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp GGGCAAACAGCTCAGCTCGGTTGGCATCAAAGAGGCTaGGGGCCTTGGCTTGGGTGGTGGTCTCCAGCTCGT +
Preference number: 6 (lower is better)
Translates to: GQTAQLGWHQRG*GPWLGWWSPAR
Trigger: ACGAGCTGGAGACCACCACCCAAGCCAAGGCCCGCAGCCTCTTTGATGCCAACCGAGCTGAGCTGTTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000530665.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
ENST00000682471.1
CDS GCA 72 bp TGCTCTCTGGGTGCTCGTGGTCAATCATGTCCTGGCTaGTGGCCGCCAGCTGGTGGATGGTCTGCGCGTAGT +
Preference number: 6 (lower is better)
Translates to: CSLGARGQSCPG*WPPAGGWSARS
Trigger: ACTACGCGCAGACCATCCACCAGCTGGCGGCCAGCAGCCAGGACATGATTGACCACGAGCACCCAGAGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp AGGCACTTCTCCGTGGTATGGCACTCCCGCGCTGGCTaGCTTGGCATCCTTGTAAAAGCCGAGGCTCCCACG +
Preference number: 6 (lower is better)
Translates to: RHFSVVWHSRAG*LGILVKAEAPT
Trigger: CGTGGGAGCCTCGGCTTTTACAAGGATGCCAAGGCAGCCAGCGCGGGAGTGCCATACCACGGAGAAGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000530775.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp CGTTCCCGTGCACCCTGCTCACTCCGTTCCCATTCATaGTGCCAGCTGCTAGTTACAGAGCCCAGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: RSRAPCSLRSHS*CQLLVTEPRAQ
Trigger: CTGGGCCCTGGGCTCTGTAACTAGCAGCTGGCAGCATGAATGGGAACGGAGTGAGCAGGGTGCACGGGAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617502.5
CDS CCA 72 bp ATCTTGTCGGCGTGGATGTTGCCTTCAGATACCAGCTaGCGGCCAGCCTCCAGGAGCCCGTGGATCCGTTCC +
Preference number: 6 (lower is better)
Translates to: ILSAWMLPSDTS*RPASRSPWIRS
Trigger: GGAACGGATCCACGGGCTCCTGGAGGCTGGCCGCCAGCTGGTATCTGAAGGCAACATCCACGCCGACAAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp TGGCGGATGGATATCCGAGTGCTCTCTGGGTGCTCGTaGTCAATCATGTCCTGGCTGCTGGCCGCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: WRMDIRVLSGCS*SIMSWLLAASW
Trigger: CCAGCTGGCGGCCAGCAGCCAGGACATGATTGACCACGAGCACCCAGAGAGCACTCGGATATCCATCCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp GCCAGCTCCTTCAGGCCGGCATACAGCTTGTCCACCTaGGCTTGGCGGATGGATATCCGAGTGCTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: ASSFRPAYSLST*AWRMDIRVLSG
Trigger: CCCAGAGAGCACTCGGATATCCATCCGCCAAGCCCAGGTGGACAAGCTGTATGCCGGCCTGAAGGAGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp GCTTCTCTGAGATCTCCTCGGCCGCATAGTGGCTCCTaGCCAGCAGCTCCTTCCCCATGTCGATGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: ASLRSPRPHSGS*PAAPSPCRCRR
Trigger: CCTCCTGCATCGACATGGGGAAGGAGCTGCTGGCCAGGAGCCACTATGCGGCCGAGGAGATCTCAGAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000532902.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 72 bp AGGGCACAGCAGCTCTGGGCAAACAGCTCAGCTCGGTaGGCATCAAAGAGGCTGCGGGCCTTGGCTTGGGTG +
Preference number: 6 (lower is better)
Translates to: RAQQLWANSSAR*ASKRLRALAWV
Trigger: CACCCAAGCCAAGGCCCGCAGCCTCTTTGATGCCAACCGAGCTGAGCTGTTTGCCCAGAGCTGCTGTGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000530665.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
ENST00000682471.1
CDS CAA 72 bp CGCTCTCCAGCCAGCTCCTTCAGGCCGGCATACAGCTaGTCCACCTGGGCTTGGCGGATGGATATCCGAGTG +
Preference number: 6 (lower is better)
Translates to: RSPASSFRPAYS*STWAWRMDIRV
Trigger: CACTCGGATATCCATCCGCCAAGCCCAGGTGGACAAGCTGTATGCCGGCCTGAAGGAGCTGGCTGGAGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 72 bp AGAACATATTCCTGGCTGCTGAGCACGCCCTCAGCCTaGCGAGCATCCCGCAGGAATCCCTGGAAGCCGTGG +
Preference number: 6 (lower is better)
Translates to: RTYSWLLSTPSA*RASRRNPWKPW
Trigger: CCACGGCTTCCAGGGATTCCTGCGGGATGCTCGTCAGGCTGAGGGCGTGCTCAGCAGCCAGGAATATGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 72 bp CCGACACCAGGGCTTTCAGCTCTGGCTTCTCAAGGGTaGGCTCTCGCCCTTCCTTGTCCACCTTGTCCAGCC +
Preference number: 6 (lower is better)
Translates to: PTPGLSALASQG*ALALPCPPCPA
Trigger: GGCTGGACAAGGTGGACAAGGAAGGGCGAGAGCTCACCCTTGAGAAGCCAGAGCTGAAAGCCCTGGTGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000530665.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp TTGGCCAACTGCCGGTCATTGAGGGTCACGATCGTTTaGTCGATCCACTGCAGCAGCTCCGAGGCCAGGGAC +
Preference number: 6 (lower is better)
Translates to: LANCRSLRVTIV*SIHCSSSEARD
Trigger: GTCCCTGGCCTCGGAGCTGCTGCAGTGGATCGAGCAAACGATCGTGACCCTCAATGACCGGCAGTTGGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp CTCTGCTCTAGCTTGGCCACCCGCTCCGACACCAGCTaGGGGTCGCAAGGTCTATACTCTTTCCCTGGGTTG +
Preference number: 6 (lower is better)
Translates to: LCSSLATRSDTS*GSQGLYSFPGL
Trigger: CAACCCAGGGAAAGAGTATAGACCTTGCGACCCGCAGCTGGTGTCGGAGCGGGTGGCCAAGCTAGAGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp AAAATCTCATCTTCCACATCGCGGTGGAACTGGTGCTaGTCGCGAGAAGCCTGCAGGCGCCGGCAGCGTTCC +
Preference number: 6 (lower is better)
Translates to: KISSSTSRWNWC*SREACRRRQRS
Trigger: GGAACGCTGCCGGCGCCTGCAGGCTTCTCGCGAGCAGCACCAGTTCCACCGCGATGTGGAAGATGAGATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp CACAAAATCTCATCTTCCACATCGCGGTGGAACTGGTaGTGCTCGCGAGAAGCCTGCAGGCGCCGGCAGCGT +
Preference number: 6 (lower is better)
Translates to: HKISSSTSRWNW*CSREACRRRQR
Trigger: ACGCTGCCGGCGCCTGCAGGCTTCTCGCGAGCAGCACCAGTTCCACCGCGATGTGGAAGATGAGATTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp TCCCGTGCACCCTGCTCACTCCGTTCCCATTCATGCTaGCAGCTGCTAGTTACAGAGCCCAGGGCCCAGAGT +
Preference number: 6 (lower is better)
Translates to: SRAPCSLRSHSC*QLLVTEPRAQS
Trigger: ACTCTGGGCCCTGGGCTCTGTAACTAGCAGCTGGCAGCATGAATGGGAACGGAGTGAGCAGGGTGCACGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617502.5
CDS CCA 72 bp TCCTTCAGGCCGGCATACAGCTTGTCCACCTGGGCTTaGCGGATGGATATCCGAGTGCTCTCTGGGTGCTCG +
Preference number: 6 (lower is better)
Translates to: SFRPAYSLSTWA*RMDIRVLSGCS
Trigger: CGAGCACCCAGAGAGCACTCGGATATCCATCCGCCAAGCCCAGGTGGACAAGCTGTATGCCGGCCTGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp TGTGGGCCCCTTCCACAGCCTCATAGTAAAACTCGCTaGCCTCATGCAGGCCGTTCCCGTGCACCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: CGPLPQPHSKTR*PHAGRSRAPCS
Trigger: TGAGCAGGGTGCACGGGAACGGCCTGCATGAGGCCAGCGAGTTTTACTATGAGGCTGTGGAAGGGGCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617502.5
CDS CAA 72 bp GTTGGCCAACTGCCGGTCATTGAGGGTCACGATCGTTaGCTCGATCCACTGCAGCAGCTCCGAGGCCAGGGA +
Preference number: 6 (lower is better)
Translates to: VGQLPVIEGHDR*LDPLQQLRGQG
Trigger: TCCCTGGCCTCGGAGCTGCTGCAGTGGATCGAGCAAACGATCGTGACCCTCAATGACCGGCAGTTGGCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 72 bp CTCCTTCAGGCCGGCATACAGCTTGTCCACCTGGGCTaGGCGGATGGATATCCGAGTGCTCTCTGGGTGCTC +
Preference number: 6 (lower is better)
Translates to: LLQAGIQLVHLG*ADGYPSALWVL
Trigger: GAGCACCCAGAGAGCACTCGGATATCCATCCGCCAAGCCCAGGTGGACAAGCTGTATGCCGGCCTGAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 72 bp CAGGCCACTGCTGACTTCTGGAAGGCCTCGTGCCGCTaGATGAGGCTCTCAACTTCGTCGACCGTGCAACCC +
Preference number: 6 (lower is better)
Translates to: QATADFWKASCR*MRLSTSSTVQP
Trigger: GGGTTGCACGGTCGACGAAGTTGAGAGCCTCATCAAGCGGCACGAGGCCTTCCAGAAGTCAGCAGTGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000532650.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 90 bp CTCTCAATGGAGTCTGCCTTTTCCCGAATCTTGTCGGCGTGGATGTaGCCTTCAGATACCAGCTGGCGGCCAGCCTCCAGGAGCCCGTGG +
Preference number: 6 (lower is better)
Translates to: LSMESAFSRILSAWM*PSDTSWRPASRSPW
Trigger: CCACGGGCTCCTGGAGGCTGGCCGCCAGCTGGTATCTGAAGGCAACATCCACGCCGACAAGATTCGGGAAAAGGCAGACTCCATTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 90 bp AGGGTCTGGTTTTTCTTCATGAGAAGCTGGACGCTGGGCAGGTCCTaGCCATGCTCCATGGAGCTGGCCATGGGCAGCCGCTCTGTCACC +
Preference number: 6 (lower is better)
Translates to: RVWFFFMRSWTLGRS*PCSMELAMGSRSVT
Trigger: GGTGACAGAGCGGCTGCCCATGGCCAGCTCCATGGAGCATGGCAAGGACCTGCCCAGCGTCCAGCTTCTCATGAAGAAAAACCAGACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 90 bp TCCAGCCAGCTCCTTCAGGCCGGCATACAGCTTGTCCACCTGGGCTaGGCGGATGGATATCCGAGTGCTCTCTGGGTGCTCGTGGTCAAT +
Preference number: 6 (lower is better)
Translates to: SSQLLQAGIQLVHLG*ADGYPSALWVLVVN
Trigger: ATTGACCACGAGCACCCAGAGAGCACTCGGATATCCATCCGCCAAGCCCAGGTGGACAAGCTGTATGCCGGCCTGAAGGAGCTGGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 72 bp GCATCAGCAGCCTGGAGTGTCCCTGGCATCTCCGTGTaGGACAGAACATATTCCTGGCTGCTGAGCACGCCC +
Preference number: 6 (lower is better)
Translates to: ASAAWSVPGISV*DRTYSWLLSTP
Trigger: GGGCGTGCTCAGCAGCCAGGAATATGTTCTGTCTCACACGGAGATGCCAGGGACACTCCAGGCTGCTGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp CGAGGCCAGGGACTCGTATTTCTCCACCAGGCGCTCTaGCTCCATGGCATGGTCCAGCACCTTGCCAATTCT +
Preference number: 6 (lower is better)
Translates to: RGQGLVFLHQAL*LHGMVQHLANS
Trigger: AGAATTGGCAAGGTGCTGGACCATGCCATGGAGGCAGAGCGCCTGGTGGAGAAATACGAGTCCCTGGCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp TGTGCAGACTCCATTAACACTGGGTGCTTGTGTGGATaGTGGTGGCCGTGGCTGGGTTCCGTCCCAGGTGGT +
Preference number: 6 (lower is better)
Translates to: CADSINTGCLCG*WWPWLGSVPGG
Trigger: ACCACCTGGGACGGAACCCAGCCACGGCCACCACCATCCACACAAGCACCCAGTGTTAATGGAGTCTGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000532650.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 72 bp TGGACCCCGCTAAGGGAGTTGGCCAACTGCCGGTCATaGAGGGTCACGATCGTTTGCTCGATCCACTGCAGC +
Preference number: 6 (lower is better)
Translates to: WTPLRELANCRS*RVTIVCSIHCS
Trigger: GCTGCAGTGGATCGAGCAAACGATCGTGACCCTCAATGACCGGCAGTTGGCCAACTCCCTTAGCGGGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 72 bp GAGTCTGCCTTTTCCCGAATCTTGTCGGCGTGGATGTaGCCTTCAGATACCAGCTGGCGGCCAGCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: ESAFSRILSAWM*PSDTSWRPASR
Trigger: CCTGGAGGCTGGCCGCCAGCTGGTATCTGAAGGCAACATCCACGCCGACAAGATTCGGGAAAAGGCAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 90 bp GCTAAGGGAGTTGGCCAACTGCCGGTCATTGAGGGTCACGATCGTTaGCTCGATCCACTGCAGCAGCTCCGAGGCCAGGGACTCGTATTT +
Preference number: 6 (lower is better)
Translates to: AKGVGQLPVIEGHDR*LDPLQQLRGQGLVF
Trigger: AAATACGAGTCCCTGGCCTCGGAGCTGCTGCAGTGGATCGAGCAAACGATCGTGACCCTCAATGACCGGCAGTTGGCCAACTCCCTTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 90 bp TCGATGCAGGAGGAGAAGCGGTCTGCCCGGGCCTCTATCTCTGCCTaGATGCCTTGCTGGTTCTTGATGACTAGATCCGCGGAGGACACA +
Preference number: 6 (lower is better)
Translates to: SMQEEKRSARASISA*MPCWFLMTRSAEDT
Trigger: TGTGTCCTCCGCGGATCTAGTCATCAAGAACCAGCAAGGCATCAAGGCAGAGATAGAGGCCCGGGCAGACCGCTTCTCCTCCTGCATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000532902.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 72 bp CTGGCCCTGGATTTCCAAGCTGTCAAAGTCTGTGGGTaGCAGCGTGCTGCTCATGGTGGTAGGCGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: LALDFQAVKVCG*QRAAHGGRRLP
Trigger: AGGAAGCCGCCTACCACCATGAGCAGCACGCTGTCACCCACAGACTTTGACAGCTTGGAAATCCAGGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.7
ENST00000533211.6
ENST00000611817.5
ENST00000647510.2
CDS TCA 72 bp CGCTCCCTCAGGTCCGCGATCCGGGGCTCATGGCCCTaGATCTCTTTCTGCAGGGTCTGGTTTTTCTTCATG +
Preference number: 6 (lower is better)
Translates to: RSLRSAIRGSWP*ISFCRVWFFFM
Trigger: CATGAAGAAAAACCAGACCCTGCAGAAAGAGATTCAGGGCCATGAGCCCCGGATCGCGGACCTGAGGGAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 72 bp TCAGGCTCCTTACAGGAACTCCCCTCCCTCTGGACCTaGCTCATGGCTCACCTGTGTCACTCCCAACTCTCC +
Preference number: 6 (lower is better)
Translates to: SGSLQELPSLWT*LMAHLCHSQLS
Trigger: GGAGAGTTGGGAGTGACACAGGTGAGCCATGAGTCAGGTCCAGAGGGAGGGGAGTTCCTGTAAGGAGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530775.1
CDS GCA 72 bp AGTCTGCCTTTTCCCGAATCTTGTCGGCGTGGATGTTaGCTTCAGATACCAGCTGGCGGCCAGCCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: SLPFPESCRRGC*LQIPAGGQPPG
Trigger: TCCTGGAGGCTGGCCGCCAGCTGGTATCTGAAGGCAACATCCACGCCGACAAGATTCGGGAAAAGGCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp AACACAAGCACCTCCAAAACTGGCAGGATCGGGGGTTaGAGGAAGATGGTGGGTCAGAGTGGCCACTGGCAG +
Preference number: 6 (lower is better)
Translates to: NTSTSKTGRIGG*RKMVGQSGHWQ
Trigger: CTGCCAGTGGCCACTCTGACCCACCATCTTCCTGCAACCCCCGATCCTGCCAGTTTTGGAGGTGCTTGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532650.1
CDS CCA 72 bp GTCTCTCAGCTTCTCCGACACCAGGGCTTTCAGCTCTaGCTTCTCAAGGGTGAGCTCTCGCCCTTCCTTGTC +
Preference number: 6 (lower is better)
Translates to: VSQLLRHQGFQL*LLKGELSPFLV
Trigger: GACAAGGAAGGGCGAGAGCTCACCCTTGAGAAGCCAGAGCTGAAAGCCCTGGTGTCGGAGAAGCTGAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000530665.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp TCTGTCACCCACAAAATCTCATCTTCCACATCGCGGTaGAACTGGTGCTGCTCGCGAGAAGCCTGCAGGCGC +
Preference number: 6 (lower is better)
Translates to: SVTHKISSSTSR*NWCCSREACRR
Trigger: GCGCCTGCAGGCTTCTCGCGAGCAGCACCAGTTCCACCGCGATGTGGAAGATGAGATTTTGTGGGTGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp GTCTCTCAGCTTCTCCGACACCAGGGCTTTCAGCTCTaGCTTCTCAAGGGTGAGCTCTCGCCCTTCCTGGTT +
Preference number: 6 (lower is better)
Translates to: VSQLLRHQGFQL*LLKGELSPFLV
Trigger: AACCAGGAAGGGCGAGAGCTCACCCTTGAGAAGCCAGAGCTGAAAGCCCTGGTGTCGGAGAAGCTGAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682471.1
CDS CAA 72 bp AAGGACTGCAGCTGGTTCTGGACCCCGCTAAGGGAGTaGGCCAACTGCCGGTCATTGAGGGTCACGATCGTT +
Preference number: 6 (lower is better)
Translates to: KDCSWFWTPLRE*ANCRSLRVTIV
Trigger: AACGATCGTGACCCTCAATGACCGGCAGTTGGCCAACTCCCTTAGCGGGGTCCAGAACCAGCTGCAGTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 72 bp CTGCTGCTCCCGGTTGTCCCGAAGACGGCCCAGAAATaGCTGCGCTGCGTCTTGATTCTTCTTGTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: LLLPVVPKTAQK*LRCVLILLVPP
Trigger: AGGAGGCACAAGAAGAATCAAGACGCAGCGCAGCAATTTCTGGGCCGTCTTCGGGACAACCGGGAGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 72 bp GAGGAGAAGCGGTCTGCCCGGGCCTCTATCTCTGCCTaGATGCCTTGCTGGTTCTTGATGACTAGATCCGCG +
Preference number: 6 (lower is better)
Translates to: EEKRSARASISA*MPCWFLMTRSA
Trigger: CGCGGATCTAGTCATCAAGAACCAGCAAGGCATCAAGGCAGAGATAGAGGCCCGGGCAGACCGCTTCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000532902.1
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp TCAATGGAGTCTGCCTTTTCCCGAATCTTGTCGGCGTaGATGTTGCCTTCAGATACCAGCTGGCGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: SMESAFSRILSA*MLPSDTSWRPA
Trigger: GGCTGGCCGCCAGCTGGTATCTGAAGGCAACATCCACGCCGACAAGATTCGGGAAAAGGCAGACTCCATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp TCTCCGCCTCCCTCATCTACACTATCCCCAAGTGGCTaGCCTGGTTACTCCACTCAGGCTCCTTACAGGAAC +
Preference number: 6 (lower is better)
Translates to: SPPPSSTLSPSG*PGYSTQAPYRN
Trigger: GTTCCTGTAAGGAGCCTGAGTGGAGTAACCAGGCCAGCCACTTGGGGATAGTGTAGATGAGGGAGGCGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530775.1
CDS CAA 90 bp TTCTTCTTGTGCCTCCTCTCAATGGAGTCTGCCTTTTCCCGAATCTaGTCGGCGTGGATGTTGCCTTCAGATACCAGCTGGCGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: FFLCLLSMESAFSRI*SAWMLPSDTSWRPA
Trigger: GGCTGGCCGCCAGCTGGTATCTGAAGGCAACATCCACGCCGACAAGATTCGGGAAAAGGCAGACTCCATTGAGAGGAGGCACAAGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 90 bp CAGGAAATGCTGCTGCTCCCGGTTGTCCCGAAGACGGCCCAGAAATaGCTGCGCTGCGTCTTGATTCTTCTTGTGCCTCCTCTCAATGGA +
Preference number: 6 (lower is better)
Translates to: QEMLLLPVVPKTAQK*LRCVLILLVPPLNG
Trigger: TCCATTGAGAGGAGGCACAAGAAGAATCAAGACGCAGCGCAGCAATTTCTGGGCCGTCTTCGGGACAACCGGGAGCAGCAGCATTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 72 bp TCCCGAAGACGGCCCAGAAATTGCTGCGCTGCGTCTTaGTTCTTCTTGTGCCTCCTCTCAATGGAGTCTGCC +
Preference number: 6 (lower is better)
Translates to: SRRRPRNCCAAS*FFLCLLSMESA
Trigger: GGCAGACTCCATTGAGAGGAGGCACAAGAAGAATCAAGACGCAGCGCAGCAATTTCTGGGCCGTCTTCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp CCGGTTGTCCCGAAGACGGCCCAGAAATTGCTGCGCTaGGTCTTGATTCTTCTTGTGCCTCCTCTCAATGGA +
Preference number: 6 (lower is better)
Translates to: PVVPKTAQKLLR*VLILLVPPLNG
Trigger: TCCATTGAGAGGAGGCACAAGAAGAATCAAGACGCAGCGCAGCAATTTCTGGGCCGTCTTCGGGACAACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp GCAGCTGGGCCGGCTCTCCCTCCCAGAACATCTCCATaGCACAGTGAAGATTCGTCTTCTACAGATCAGATG +
Preference number: 6 (lower is better)
Translates to: AAGPALPPRTSP*HSEDSSSTDQM
Trigger: CATCTGATCTGTAGAAGACGAATCTTCACTGTGCCATGGAGATGTTCTGGGAGGGAGAGCCGGCCCAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.7
ENST00000533211.6
ENST00000611817.5
ENST00000647510.2
CDS TCA 72 bp AGCTGTTTGAAGCGTCCTTCCAGCACGCTGGCATACTaGGCAGGGTTGATGAAAGCAGCTGGTGAAAGCAGG +
Preference number: 6 (lower is better)
Translates to: SCLKRPSSTLAY*AGLMKAAGESR
Trigger: CCTGCTTTCACCAGCTGCTTTCATCAACCCTGCTCAGTATGCCAGCGTGCTGGAAGGACGCTTCAAACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617502.5
CDS GCA 72 bp CTGCTCGGCAATGTCATTCACCGCGGTGATTTGTGCTaGAAGGGTGTTCATTTCAGGCTCCAGGGTCTCGAA +
Preference number: 6 (lower is better)
Translates to: LLGNVIHRGDLC*KGVHFRLQGLE
Trigger: TTCGAGACCCTGGAGCCTGAAATGAACACCCTTGCAGCACAAATCACCGCGGTGAATGACATTGCCGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp TCTTTCTGCAGGGTCTGGTTTTTCTTCATGAGAAGCTaGACGCTGGGCAGGTCCTTGCCATGCTCCATGGAG +
Preference number: 6 (lower is better)
Translates to: SFCRVWFFFMRS*TLGRSLPCSME
Trigger: CTCCATGGAGCATGGCAAGGACCTGCCCAGCGTCCAGCTTCTCATGAAGAAAAACCAGACCCTGCAGAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CAA 72 bp TGCCTCCTCTCAATGGAGTCTGCCTTTTCCCGAATCTaGTCGGCGTGGATGTTGCCTTCAGATACCAGCTGG +
Preference number: 6 (lower is better)
Translates to: CLLSMESAFSRI*SAWMLPSDTSW
Trigger: CCAGCTGGTATCTGAAGGCAACATCCACGCCGACAAGATTCGGGAAAAGGCAGACTCCATTGAGAGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 72 bp GCCGGCTCTCCCTCCCAGAACATCTCCATGGCACAGTaGAGATTCGTCTTCTACAGATCAGATGCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: AGSPSQNISMAQ*RFVFYRSDAPN
Trigger: GTTTGGAGCATCTGATCTGTAGAAGACGAATCTTCACTGTGCCATGGAGATGTTCTGGGAGGGAGAGCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.7
ENST00000533211.6
ENST00000611817.5
ENST00000647510.2
CDS TCA 72 bp CCTTCAGTAACTGCTCGGCAATGTCATTCACCGCGGTaGTTTGTGCTGCAAGGGTGTTCATTTCAGGCTCCA +
Preference number: 6 (lower is better)
Translates to: PSVTARQCHSPR*FVLQGCSFQAP
Trigger: TGGAGCCTGAAATGAACACCCTTGCAGCACAAATCACCGCGGTGAATGACATTGCCGAGCAGTTACTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS TCA 72 bp ATCCCGAGAGCACTGTTCCCTGTTCCTACCCCAGCTTaGAGACATGTTTGCGCTTTCGGTAATCAAAGGCGA +
Preference number: 6 (lower is better)
Translates to: IPRALFPVPTPA*RHVCAFGNQRR
Trigger: TCGCCTTTGATTACCGAAAGCGCAAACATGTCTTCAAGCTGGGGTAGGAACAGGGAACAGTGCTCTCGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530775.1
CDS GCA 72 bp GTCTTGATTCTTCTTGTGCCTCCTCTCAATGGAGTCTaGCTTTTCCCGAATCTTGTCGGCGTGGATGTTGCC +
Preference number: 6 (lower is better)
Translates to: VLILLVPPLNGV*LFPNLVGVDVA
Trigger: GGCAACATCCACGCCGACAAGATTCGGGAAAAGGCAGACTCCATTGAGAGGAGGCACAAGAAGAATCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS CCA 72 bp CCTCAGGCTGGAGTCCAGCGTCAGGGGATTCAAGAATaGTGGGAATTTCAAGGAGTGGCAAAAAGAGTTACG +
Preference number: 6 (lower is better)
Translates to: PQAGVQRQGIQE*WEFQGVAKRVT
Trigger: CGTAACTCTTTTTGCCACTCCTTGAAATTCCCACCATTCTTGAATCCCCTGACGCTGGACTCCAGCCTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617502.5
CDS CAA 72 bp ATTTCTAGGCCTGACACGGCTGGGTTTCTCCTTGGTTaGTTAGCGTCTGAGTGGTCTAAGGTCCAAGGTCCT +
Preference number: 6 (lower is better)
Translates to: ISRPDTAGFLLG*LASEWSKVQGP
Trigger: AGGACCTTGGACCTTAGACCACTCAGACGCTAACAAACCAAGGAGAAACCCAGCCGTGTCAGGCCTAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.7
ENST00000533211.6
ENST00000611817.5
ENST00000647510.2
CDS CAA 72 bp GGCTGGTCCACATTCACGTCTTCGGGATCCAGCAGCTaGGTAAGTCCCAGTTCCTTTTCAGCCAGATTGAAT +
Preference number: 6 (lower is better)
Translates to: GWSTFTSSGSSS*VSPSSFSARLN
Trigger: ATTCAATCTGGCTGAAAAGGAACTGGGACTTACCAAGCTGCTGGATCCCGAAGACGTGAATGTGGACCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2
CDS GCA 72 bp CATGGCACAGTGAAGATTCGTCTTCTACAGATCAGATaGTCCAAACAGGCATCTCAGCGCTTCTCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: HGTVKIRLLQIR*SKQASQRFSAP
Trigger: AGGAGCTGAGAAGCGCTGAGATGCCTGTTTGGAGCATCTGATCTGTAGAAGACGAATCTTCACTGTGCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309996.7
ENST00000533211.6
ENST00000611817.5
ENST00000647510.2
CDS GCA 72 bp CTTGGTAAGTCCCAGTTCCTTTTCAGCCAGATTGAATaGATTCTGCAGATTATAGTGTGCATTACACTTCTT +
Preference number: 6 (lower is better)
Translates to: LGKSQFLFSQIE*ILQIIVCITLL
Trigger: AAGAAGTGTAATGCACACTATAATCTGCAGAATGCATTCAATCTGGCTGAAAAGGAACTGGGACTTACCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309996.7
ENST00000529997.5
ENST00000533211.6
ENST00000611817.5
ENST00000617502.5
ENST00000647510.2