RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPINK5 (Homo sapiens)

Ensembl gene IDs: ENSG00000133710

Ensembl transcript IDs: ENST00000256084.8, ENST00000359874.7, ENST00000398454.5, ENST00000476697.7, ENST00000481286.5, ENST00000507988.5, ENST00000508733.5, ENST00000521206.5

Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACAGACAGCATTGTAATCAGGACATTTTGAGGGCTCAGACTTGGTaGAGATGTCTTTATACCCTCAGATCACAGAGTCTAGGAGGAAAG +
Preference number: 1 (lower is better)
Translates to: DRQHCNQDILRAQTW*RCLYTLRSQSLGGK
Trigger: CTTTCCTCCTAGACTCTGTGATCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACAATGCTGTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
3UTR CCA 90 bp TTGGACAGACAGCATTGTAATCAGGACATTTTGAGGGCTCAGACTTaGTGGAGATGTCTTTATACCCTCAGATCACAGAGTCTAGGAGGA +
Preference number: 1 (lower is better)
Translates to: LDRQHCNQDILRAQT*WRCLYTLRSQSLGG
Trigger: TCCTCCTAGACTCTGTGATCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACAATGCTGTCTGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
3UTR CAA 90 bp CCCAGAAAGGGTGTTCTGCTGAGTTTACTTTTATTGAACAGGCAGTaGGACAGACAGCATTGTAATCAGGACATTTTGAGGGCTCAGACT +
Preference number: 2 (lower is better)
Translates to: PRKGVLLSLLLLNRQ*DRQHCNQDILRAQT
Trigger: AGTCTGAGCCCTCAAAATGTCCTGATTACAATGCTGTCTGTCCAACTGCCTGTTCAATAAAAGTAAACTCAGCAGAACACCCTTTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256084.8
3UTR-3UTR GCA 90 bp GCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTGGCATTTTCAGCTTCTTTTCAGCTCAGCACACATTaGACACTTATTGCCATGCGT +
Preference number: 2 (lower is better)
Translates to: AFRRILVSPSRLAFSASFQLSTH*TLIAMR
Trigger: ACGCATGGCAATAAGTGTGCAATGTGTGCTGAGCTG...AAAAGAAGCTGAAAATGCCAAGCGAGAGGGTGAAACTAGAATTCGACGAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476697.7
3UTR CAA 90 bp TTATTGAACAGGCAGTTGGACAGACAGCATTGTAATCAGGACATTTaGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGATCA +
Preference number: 2 (lower is better)
Translates to: LLNRQLDRQHCNQDI*RAQTWWRCLYTLRS
Trigger: TGATCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACAATGCTGTCTGTCCAACTGCCTGTTCAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
3UTR-3UTR GCA 90 bp GCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTGGCATTTTCAGCTTCTTTTACATTGCACACTTATTaGCATGCGTCTTCCCATCAG +
Preference number: 2 (lower is better)
Translates to: AFRRILVSPSRLAFSASFTLHTY*HASSHQ
Trigger: CTGATGGGAAGACGCATGGCAATAAGTGTGCAATGT...AAAAGAAGCTGAAAATGCCAAGCGAGAGGGTGAAACTAGAATTCGACGAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476697.7
3UTR-3UTR GCA 90 bp CTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTGATCATTTTCCCTTGTaGATCCAAGTCTTCCATCTC +
Preference number: 2 (lower is better)
Translates to: LAKILFSISSNSSFTLSLDHFPL*IQVFHL
Trigger: GAGATGGAAGACTTGGATGCACAAGGGAAAATGATC...AAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000476697.7
3UTR TCA 72 bp GGCAGTTGGACAGACAGCATTGTAATCAGGACATTTTaGGGGCTCAGACTTGGTGGAGATGTCTTTATACCC +
Preference number: 3 (lower is better)
Translates to: GSWTDSIVIRTF*GLRLGGDVFIP
Trigger: GGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACAATGCTGTCTGTCCAACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
3UTR-3UTR CAA 90 bp TCCTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCACAGCTCAGCACACATaGCACACTTATTGCCATGCG +
Preference number: 3 (lower is better)
Translates to: SLQKSFSAFRRILVSPSRTAQHT*HTYCHA
Trigger: CGCATGGCAATAAGTGTGCAATGTGTGCTGAGCTGT...GCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR GCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGACGGGGGCATGCTGGCTaGGGTGGTTCCTGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRRGHAG*GGSWGA
Trigger: AGCACCCCAGGAACCACCGCAGCCAGCATGCCCCCG...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCCGGGGGCATGCTGGCTaGGGTGGTTCCTGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLRGHAG*GGSWGA
Trigger: AGCACCCCAGGAACCACCGCAGCCAGCATGCCCCCG...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGACAGACGGGGGCATGCTaGCTGCGGTGGTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRQTGAC*LRWFLG
Trigger: CCCCAGGAACCACCGCAGCCAGCATGCCCCCGTCTG...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCTGTTGCCATGCATCCTaGCGTCAGGGCCACGGACTG +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLCCHAS*RQGHGL
Trigger: CAGTCCGTGGCCCTGACGGCAGGATGCATGGCAACA...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp TCCTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTGTTGCCATGCATCCTaGCGTCAGGGCCACGGACTG +
Preference number: 4 (lower is better)
Translates to: SLQKSFSAFRRILVSPSRCCHAS*RQGHGL
Trigger: CAGTCCGTGGCCCTGACGGCAGGATGCATGGCAACA...GCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR GCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGATGGTTCCTGGGGTGCTaGTCTCCTCACACTTCCCTG +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRWFLGC*SPHTSL
Trigger: CAGGGAAGTGTGAGGAGAGCAGCACCCCAGGAACCA...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGCGTCAGACGGGGGCATaGTGGCTGCGGTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRRQTGA*WLRWFL
Trigger: CAGGAACCACCGCAGCCAGCATGCCCCCGTCTGACG...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAGTCAGGGCCACGGACTaGATCACTCTCCCGTGTACA +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRVRATD*ITLPCT
Trigger: TGTACACGGGAGAGTGATCCAGTCCGTGGCCCTGAC...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATCAGACGGGGGCATGCTaGCTGCGGTGGTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDQTGAC*LRWFLG
Trigger: CCCCAGGAACCACCGCAGCCAGCATGCCCCCGTCTG...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCTCCTCCGCTTCATTCTaGACCTGTCTGCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLSSASF*TCLHWS
Trigger: GGACCAGTGCAGACAGGTTCAGAATGAAGCGGAGGA...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359874.7
CDS-3UTR GCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAGCACATTTGTTGCCATaGATCCTGCCGTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRAHLLP*ILPSGP
Trigger: TGGCCCTGACGGCAGGATGCATGGCAACAAATGTGC...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCCGTCAGACGGGGGCATaGTGGCTGCGGTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFRQTGA*WLRWFL
Trigger: CAGGAACCACCGCAGCCAGCATGCCCCCGTCTGACG...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCCTCCTCCACCACCACTaGAACCATGTCCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLLLHHH*NHVLQH
Trigger: ATGCTGCAGGACATGGTTCCAGTGGTGGTGGAGGAG...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGGCATGCTGGCTGCGGTaGTTCCTGGGGTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRACWLR*FLGCCS
Trigger: AGAGCAGCACCCCAGGAACCACCGCAGCCAGCATGC...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGATGGCAGCATCTTGTATaGGGCAAAGAGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRWQHLV*GKEPRA
Trigger: TGCCCTTGGCTCTTTGCCTCATACAAGATGCTGCCA...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGATCAGCACATTCGTCCTaGGTGTTTCCTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRSAHSS*VFPPPP
Trigger: TGGTGGAGGAGGAAACACTCAGGACGAATGTGCTGA...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp GCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTGGCATTTTCAGCTTCTTTTGCACATTTGTTGCCATaGATCCTGCCGTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: AFRRILVSPSRLAFSASFAHLLP*ILPSGP
Trigger: TGGCCCTGACGGCAGGATGCATGGCAACAAATGTGC...AAAAGAAGCTGAAAATGCCAAGCGAGAGGGTGAAACTAGAATTCGACGAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR GCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAACAGGGCACATTTGTTaGCATGCATCCTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRTGHIC*HASCRQ
Trigger: CTGACGGCAGGATGCATGGCAACAAATGTGCCCTGT...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp TTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTGGCATTTTCAGCTTCACAGGGCACATTTGTTaGCATGCATCCTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: FSISSNSSFTLSLGIFSFTGHIC*HASCRQ
Trigger: CTGACGGCAGGATGCATGGCAACAAATGTGCCCTGT...GAAGCTGAAAATGCCAAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGCGGTGGTTCCTGGGGTaGTGCTCTCCTCACACTTCC +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRRWFLG*CSPHTS
Trigger: GGAAGTGTGAGGAGAGCAGCACCCCAGGAACCACCG...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp CTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTGTCAGGGCCACGGACTaGATCACTCTCCCGTGTACA +
Preference number: 4 (lower is better)
Translates to: LAKILFSISSNSSFTLSLVRATD*ITLPCT
Trigger: TGTACACGGGAGAGTGATCCAGTCCGTGGCCCTGAC...AAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCATCAGCACCGTGCACTaGGTCATTCTCTCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLISTVH*VILSRA
Trigger: TGCCCTAGAGAGAATGACCCAGTGCACGGTGCTGAT...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGCATGCTGGCTGCGGTaGTTCCTGGGGTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGACWLR*FLGCCS
Trigger: AGAGCAGCACCCCAGGAACCACCGCAGCCAGCATGC...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCCAAGGGCAGAAGCACTaGCACTGTGGCTATCTTCAT +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLQGQKH*HCGYLH
Trigger: ATGAAGATAGCCACAGTGTCAGTGCTTCTGCCCTTG...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp TCCTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTGGCAGCATCTTGTATaGGGCAAAGAGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SLQKSFSAFRRILVSPSRWQHLV*GKEPRA
Trigger: TGCCCTTGGCTCTTTGCCTCATACAAGATGCTGCCA...GCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR GCA 90 bp TCCTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTACAGGTCCACTCCATaGATTGCTCAGCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SLQKSFSAFRRILVSPSRYRSTP*IAQLVQ
Trigger: CTGCACCAGCTGAGCAATGCATGGAGTGGACCTGTA...GCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR GCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAAGGGCCGAAAAGCACTaGATACATCCTGCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRRAEKH*IHPALD
Trigger: ATCCAGAGCAGGATGTATGCAGTGCTTTTCGGCCCT...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCTGTTGCCATGCATCCTaGCGTCAGGGCCACGGACTG +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFCCHAS*RQGHGL
Trigger: CAGTCCGTGGCCCTGACGGCAGGATGCATGGCAACA...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CTTGTGCATCCAAGTCTTCCATCTCTAACAAAGGGCCGAAAAGCACTGCATACAACAGAGCACAGTCCTTaGCATCAACTTGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: LVHPSLPSLTKGRKALHTTEHSP*HQLAPN
Trigger: ATTGGGAGCAAGTTGATGGCAAGGACTGTGCTCTGT...TGTATGCAGTGCTTTTCGGCCCTTTGTTAGAGATGGAAGACTTGGATGCACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR TCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCTGGCTATCTTCATGTTaGAGACGATGCAAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLWLSSC*RRCKSP
Trigger: AGGCGACTTGCATCGTCTTCAACATGAAGATAGCCA...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCCCTGGCCCTCTTCTGTaGTTTTGCTTCTTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLPGPLL*FCFFFQ
Trigger: CTGGAAAAAGAAGCAAAATCACAGAAGAGGGCCAGG...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAGTAATCAGGACATTTTaGGGGCTCAGACTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRVIRTF*GLRLGG
Trigger: TCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTAC...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCCCTGCTCTGGATTACTaGTCTTACATTCCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLPALDY*SYIPLH
Trigger: GTGAAGGGGAATGTAAGAGCAGTAATCCAGAGCAGG...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCTGTTGCCATGGGTCTTaGCATCTGGGCCACGCACAG +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFCCHGS*HLGHAQ
Trigger: CTGTGCGTGGCCCAGATGGCAAGACCCATGGCAACA...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTTGTTGCCATGGGTCTTaGCATCTGGGCCACGCACAG +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGCCHGS*HLGHAQ
Trigger: CTGTGCGTGGCCCAGATGGCAAGACCCATGGCAACA...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CTTGTGCATCCAAGTCTTCCATCTCTAACAAAGGGCCGAAAAGCACTGCATACATCCTTGCCATCAACTTaGTCCCAATCTCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LVHPSLPSLTKGRKALHTSLPST*SQSPGK
Trigger: TTTTCCAGGAGATTGGGAGCAAGTTGATGGCAAGGA...TGTATGCAGTGCTTTTCGGCCCTTTGTTAGAGATGGAAGACTTGGATGCACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR GCA 90 bp CTTGTGCATCCAAGTCTTCCATCTCTAACAAAGGGCCGAAAAGCACTGCATACACTGCATACATCTATGTaGCAGAACTCAGACAGAGCA +
Preference number: 4 (lower is better)
Translates to: LVHPSLPSLTKGRKALHTLHTSM*QNSDRA
Trigger: TGCTCTGTCTGAGTTCTGGCACATAGATGTATGCAG...TGTATGCAGTGCTTTTCGGCCCTTTGTTAGAGATGGAAGACTTGGATGCACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATGTCAGGGCCACGGACTaGATCACTCTCCCGTGTACA +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDVRATD*ITLPCT
Trigger: TGTACACGGGAGAGTGATCCAGTCCGTGGCCCTGAC...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCATGCATTTTGCCATCTaGGCCACGGACAGGATTATG +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLMHFAI*ATDRIM
Trigger: CATAATCCTGTCCGTGGCCCAGATGGCAAAATGCAT...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
3UTR CAA 72 bp AGGCAGTTGGACAGACAGCATTGTAATCAGGACATTTaGAGGGCTCAGACTTGGTGGAGATGTCTTTATACC +
Preference number: 4 (lower is better)
Translates to: RQLDRQHCNQDI*RAQTWWRCLYT
Trigger: GGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACAATGCTGTCTGTCCAACTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp CTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTCAAGGGCAGAAGCACTaGCACTGTGGCTATCTTCAT +
Preference number: 4 (lower is better)
Translates to: LAKILFSISSNSSFTLSLQGQKH*HCGYLH
Trigger: ATGAAGATAGCCACAGTGTCAGTGCTTCTGCCCTTG...AAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR TCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAGCAAAGCTCTGCATATaGGGTTGCTTTTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRAKLCI*GCFSRF
Trigger: GAATCTGGAAAAGCAACCTCATATGCAGAGCTTTGC...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCCTTCTTCTTCAAGTTTaGACACACTGGCACACATGG +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLLLLQV*THWHTW
Trigger: CCATGTGTGCCAGTGTGTTCAAACTTGAAGAAGAAG...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGACGTATCAGGTTTTCATaGCAGAGCATGCAAGGATTG +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRRIRFS*QSMQGL
Trigger: CAATCCTTGCATGCTCTGTCATGAAAACCTGATACG...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCGATGGTGAAGGTAGGTaGTTCAGAACTGGGGTTTAT +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLDGEGR*FRTGVY
Trigger: ATAAACCCCAGTTCTGAATCACCTACCTTCACCATC...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTACAGGTCCACTCCATaGATTGCTCAGCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRYRSTP*IAQLVQ
Trigger: CTGCACCAGCTGAGCAATGCATGGAGTGGACCTGTA...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCACATTGCACACTTATTaGCATGCGTCTTCCCATCAG +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLTLHTY*HASSHQ
Trigger: CTGATGGGAAGACGCATGGCAATAAGTGTGCAATGT...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp TTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTGGCATTTTCAGCTTCACATTGCACACTTATTaGCATGCGTCTTCCCATCAG +
Preference number: 4 (lower is better)
Translates to: FSISSNSSFTLSLGIFSFTLHTY*HASSHQ
Trigger: CTGATGGGAAGACGCATGGCAATAAGTGTGCAATGT...GAAGCTGAAAATGCCAAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR GCA 90 bp TCCTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCCAGCTCAGCACACATTaGACACTTATTGCCATGCGT +
Preference number: 4 (lower is better)
Translates to: SLQKSFSAFRRILVSPSRQLSTH*TLIAMR
Trigger: ACGCATGGCAATAAGTGTGCAATGTGTGCTGAGCTG...GCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR GCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATGCACATTTGTTGCCATaGATCCTGCCGTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDAHLLP*ILPSGP
Trigger: TGGCCCTGACGGCAGGATGCATGGCAACAAATGTGC...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAACTGGAACCATGTCCTaGAGCATTTCTCTGATCTTC +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRTGTMS*SISLIF
Trigger: GAAGATCAGAGAAATGCTGCAGGACATGGTTCCAGT...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCCTCCTCCACCACCACTaGAACCATGTCCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFLLHHH*NHVLQH
Trigger: ATGCTGCAGGACATGGTTCCAGTGGTGGTGGAGGAG...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCTTGAGGGCTCAGACTTaGTGGAGATGTCTTTATACC +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLLRAQT*WRCLYT
Trigger: GGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAA...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp CTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTTGGCTATCTTCATGTTaGAGACGATGCAAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: LAKILFSISSNSSFTLSLWLSSC*RRCKSP
Trigger: AGGCGACTTGCATCGTCTTCAACATGAAGATAGCCA...AAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR TCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATTGGCAGCATCTTGTATaGGGCAAAGAGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDWQHLV*GKEPRA
Trigger: TGCCCTTGGCTCTTTGCCTCATACAAGATGCTGCCA...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGATCATGGCACATTTCCTaGTCTTCATTCTTACTGGCA +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRSWHIS*SSFLLA
Trigger: TGCCAGTAAGAATGAAGATCAGGAAATGTGCCATGA...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp TTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTGGCATTTTCAGCTTCTCATGGCACATTTCCTaGTCTTCATTCTTACTGGCA +
Preference number: 4 (lower is better)
Translates to: FSISSNSSFTLSLGIFSFSWHIS*SSFLLA
Trigger: TGCCAGTAAGAATGAAGATCAGGAAATGTGCCATGA...GAAGCTGAAAATGCCAAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR TCA 90 bp CTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTCCTGGCCCTCTTCTGTaGTTTTGCTTCTTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LAKILFSISSNSSFTLSLPGPLL*FCFFFQ
Trigger: CTGGAAAAAGAAGCAAAATCACAGAAGAGGGCCAGG...AAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR TCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATTCAGCACATTCGTCCTaGGTGTTTCCTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDSAHSS*VFPPPP
Trigger: TGGTGGAGGAGGAAACACTCAGGACGAATGTGCTGA...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCTACAGGTCCACTCCATaGATTGCTCAGCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFYRSTP*IAQLVQ
Trigger: CTGCACCAGCTGAGCAATGCATGGAGTGGACCTGTA...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCGATCATTTTCCCTTGTaGATCCAAGTCTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLDHFPL*IQVFHL
Trigger: GAGATGGAAGACTTGGATGCACAAGGGAAAATGATC...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTACAGGGCACATTTGTTaGCATGCATCCTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGTGHIC*HASCRQ
Trigger: CTGACGGCAGGATGCATGGCAACAAATGTGCCCTGT...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAGCTTTCGATATTCACTaGAAAGCTCTGCATATGAGG +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRAFDIH*KALHMR
Trigger: CCTCATATGCAGAGCTTTGCAGTGAATATCGAAAGC...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCGCACAGCTCCTGAACTaGTTCTCTCTTAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLAQLLN*FSLNFF
Trigger: GAAAAAGTTAAGAGAGAAGCAGTTCAGGAGCTGTGC...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCTTCTTTCTGGAAGACTaGCTTACACATGGCACACTT +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLFFLED*LTHGTL
Trigger: AAGTGTGCCATGTGTAAGGCAGTCTTCCAGAAAGAA...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGATTCTTTCTGGAAGACTaGCTTACACATGGCACACTT +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRFFLED*LTHGTL
Trigger: AAGTGTGCCATGTGTAAGGCAGTCTTCCAGAAAGAA...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCTATTGCCATGTGTCTTaGCATCTGGACCCCGGACAG +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFYCHVS*HLDPGQ
Trigger: CTGTCCGGGGTCCAGATGGCAAGACACATGGCAATA...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTTATTGCCATGTGTCTTaGCATCTGGACCCCGGACAG +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGYCHVS*HLDPGQ
Trigger: CTGTCCGGGGTCCAGATGGCAAGACACATGGCAATA...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAGCACATTTATTGATGTaGATCTTGCCATATGGGCCT +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRAHLLM*ILPYGP
Trigger: AGGCCCATATGGCAAGATGCACATCAATAAATGTGC...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGACACACTTCCCTGTACTaGGGATGTGTGTATTTGTTT +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRHTSLY*GCVYLF
Trigger: AAACAAATACACACATCCGCAGTACAGGGAAGTGTG...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp TCCTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCACTGCTCTGGATTACTaGTCTTACATTCCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SLQKSFSAFRRILVSPSRTALDY*SYIPLH
Trigger: GTGAAGGGGAATGTAAGAGCAGTAATCCAGAGCAGT...GCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR GCA 90 bp TTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTGGCATTTTCAGCTTCACAGGCTCACAAAACTaGTCTGGATTACTGCTCTTA +
Preference number: 4 (lower is better)
Translates to: FSISSNSSFTLSLGIFSFTGSQN*SGLLLL
Trigger: TAAGAGCAGTAATCCAGAGCAGTTTTGTGAGCCTGT...GAAGCTGAAAATGCCAAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR GCA 90 bp CTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTAGGGCCGAAAAGCACTaGATACATCTATGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LAKILFSISSNSSFTLSLRAEKH*IHLCAR
Trigger: TCTGGCACATAGATGTATGCAGTGCTTTTCGGCCCT...AAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTACAATTCAGCTCTGTTaGGGCAGTAGCCTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGTIQLC*GSSLGS
Trigger: GCTCCCAAGGCTACTGCCCCAACAGAGCTGAATTGT...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATACAATTCAGCTCTGTTaGGGCAGTAGCCTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDTIQLC*GSSLGS
Trigger: GCTCCCAAGGCTACTGCCCCAACAGAGCTGAATTGT...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCCTTTTTACACCAATTTaGGACCCGGTTTTCGCATTC +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLLFTPI*DPVFAF
Trigger: GAATGCGAAAACCGGGTCCCAAATTGGTGTAAAAAG...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCGCATACATCCTGCTCTaGATTACTGCTCTTACATTC +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLAYILL*ITALTF
Trigger: GAATGTAAGAGCAGTAATCCAGAGCAGGATGTATGC...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCATCAGCACCGTGCACTaGGTCATTCTCTCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFISTVH*VILSRA
Trigger: TGCCCTAGAGAGAATGACCCAGTGCACGGTGCTGAT...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGGCTATCTTCATGTTaGAGACGATGCAAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRWLSSC*RRCKSP
Trigger: AGGCGACTTGCATCGTCTTCAACATGAAGATAGCCA...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGCCTGGCCCTCTTCTGTaGTTTTGCTTCTTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRPGPLL*FCFFFQ
Trigger: CTGGAAAAAGAAGCAAAATCACAGAAGAGGGCCAGG...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCGGGCTGTCTTCCTCTTaGGAAGCTCTAACATGGGAT +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFGLSSS*EALTWD
Trigger: ATCCCATGTTAGAGCTTCTCAAGAGGAAGACAGCCC...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGGGCTGTCTTCCTCTTaGGAAGCTCTAACATGGGAT +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGGLSSS*EALTWD
Trigger: ATCCCATGTTAGAGCTTCTCAAGAGGAAGACAGCCC...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCGGAGCTCTTGCTAAATaGCTGGCCCTCTTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFGALAK*LALFCD
Trigger: ATCACAGAAGAGGGCCAGGCATTTAGCAAGAGCTCC...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATGGAGCTCTTGCTAAATaGCTGGCCCTCTTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDGALAK*LALFCD
Trigger: ATCACAGAAGAGGGCCAGGCATTTAGCAAGAGCTCC...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTAGGGCCGAAAAGCACTaGATACATCCTGCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGRAEKH*IHPALD
Trigger: ATCCAGAGCAGGATGTATGCAGTGCTTTTCGGCCCT...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp GCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTGGCATTTTCAGCTTCTTTTGATCATTTTCCCTTGTaGATCCAAGTCTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: AFRRILVSPSRLAFSASFDHFPL*IQVFHL
Trigger: GAGATGGAAGACTTGGATGCACAAGGGAAAATGATC...AAAAGAAGCTGAAAATGCCAAGCGAGAGGGTGAAACTAGAATTCGACGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGCAGCTCAGCACACATTaGACACTTATTGCCATGCGT +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRQLSTH*TLIAMR
Trigger: ACGCATGGCAATAAGTGTGCAATGTGTGCTGAGCTG...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCTTTTCTTTTGCTTCTTaGTGGAAGAAGGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLFSFAS*WKKASH
Trigger: GTGTGAAGCCTTCTTCCAGCAAGAAGCAAAAGAAAA...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCTTAGAAAGACAGCTCTaGACATGTAGCACTTGTTTG +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLLERQL*TCSTCL
Trigger: CAAACAAGTGCTACATGTGCAGAGCTGTCTTTCTAA...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAAGTTTCGAAATTCACTaGACTCATCTGTACTCATCC +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRSFEIH*THLYSS
Trigger: GGATGAGTACAGATGAGTGCAGTGAATTTCGAAACT...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359874.7
CDS-3UTR CCA 90 bp GCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTGGCATTTTCAGCTTCTTTTCTTTTTACACCAATTTaGGACCCGGTTTTCGCATTC +
Preference number: 4 (lower is better)
Translates to: AFRRILVSPSRLAFSASFLFTPI*DPVFAF
Trigger: GAATGCGAAAACCGGGTCCCAAATTGGTGTAAAAAG...AAAAGAAGCTGAAAATGCCAAGCGAGAGGGTGAAACTAGAATTCGACGAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGATTTCACCCTCTCGCTTaGCATTTTCAGCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRFHPLA*HFQLLL
Trigger: TAAAAGAAGCTGAAAATGCCAAGCGAGAGGGTGAAA...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp TTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTGGCATTTTCAGCTTCTTTCACCCTCTCGCTTaGCATTTTCAGCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: FSISSNSSFTLSLGIFSFFHPLA*HFQLLL
Trigger: TAAAAGAAGCTGAAAATGCCAAGCGAGAGGGTGAAA...GAAGCTGAAAATGCCAAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGATGCATTTTGCCATCTaGGCCACGGACAGGATTATG +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRMHFAI*ATDRIM
Trigger: CATAATCCTGTCCGTGGCCCAGATGGCAAAATGCAT...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGACACACTGGCACACATaGCACACTTGTTTCCATGCA +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRTHWHT*HTCFHA
Trigger: TGCATGGAAACAAGTGTGCCATGTGTGCCAGTGTGT...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGACAGTCCCATTTGATCTaGAGCGAGAATACTCATTTT +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRQSHLI*SENTHF
Trigger: AAAATGAGTATTCTCGCTCCAGATCAAATGGGACTG...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAAAGATAACCTATCCTaGGCAATACTCGGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLKDNLS*AILGSL
Trigger: AAGACTACCGAGTATTGCCCAGGATAGGTTATCTTT...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp GCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTGGCATTTTCAGCTTCTTTTTTGCTCCCAATCTCCTaGAAAAAGACAAGTGTGACA +
Preference number: 4 (lower is better)
Translates to: AFRRILVSPSRLAFSASFLLPIS*KKTSVT
Trigger: TGTCACACTTGTCTTTTTCCAGGAGATTGGGAGCAA...AAAAGAAGCTGAAAATGCCAAGCGAGAGGGTGAAACTAGAATTCGACGAAATGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR TCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGGCAAAGCTCTGCATATaGGGTTGCTTTTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRAKLCI*GCFSRF
Trigger: GAATCTGGAAAAGCAACCTCATATGCAGAGCTTTGC...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCGTAATCAGGACATTTTaGGGGCTCAGACTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFVIRTF*GLRLGG
Trigger: TCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTAC...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTCCTGCTCTGGATTACTaGTCTTACATTCCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGPALDY*SYIPLH
Trigger: GTGAAGGGGAATGTAAGAGCAGTAATCCAGAGCAGG...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATCAGCTCAGCACACATTaGACACTTATTGCCATGCGT +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDQLSTH*TLIAMR
Trigger: ACGCATGGCAATAAGTGTGCAATGTGTGCTGAGCTG...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGATTTGTTTCTAGCTCGTaGTTCAGCCTTTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRFVSSS*FSLFLF
Trigger: GAAAAGAAAAAGGCTGAAGCACGAGCTAGAAACAAA...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCGATCGTTCTCTCTGGTaGAAGCAAGTTTTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFDRSLW*KQVFRS
Trigger: GGAACGGAAAACTTGCTTGCACCAGAGAGAACGATC...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATCGTTCTCTCTGGTaGAAGCAAGTTTTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGDRSLW*KQVFRS
Trigger: GGAACGGAAAACTTGCTTGCACCAGAGAGAACGATC...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCCCACGGACAGGATTATaGTCCCTGGTGCATATAAGT +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFPRTGL*SLVHIS
Trigger: ACTTATATGCACCAGGGAGCATAATCCTGTCCGTGG...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATCCACGGACAGGATTATaGTCCCTGGTGCATATAAGT +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDPRTGL*SLVHIS
Trigger: ACTTATATGCACCAGGGAGCATAATCCTGTCCGTGG...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCTTTCCATCAGCACCGTaGACTGGGTCATTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFFPSAP*TGSFSL
Trigger: TAGAGAGAATGACCCAGTGCACGGTGCTGATGGAAA...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATTTTCCATCAGCACCGTaGACTGGGTCATTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDFPSAP*TGSFSL
Trigger: TAGAGAGAATGACCCAGTGCACGGTGCTGATGGAAA...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGCCGTCCGTTTTTCCTaGATTTGCGGTATTCACTAC +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGAVRFS*ICGIHY
Trigger: GTAGTGAATACCGCAAATCCAGGAAAAACGGACGGC...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATGCCGTCCGTTTTTCCTaGATTTGCGGTATTCACTAC +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDAVRFS*ICGIHY
Trigger: GTAGTGAATACCGCAAATCCAGGAAAAACGGACGGC...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCATGCATTTTTCCATCTaGGCCCTGGATGGGGTCATT +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFMHFSI*ALDGVI
Trigger: AATGACCCCATCCAGGGCCCAGATGGAAAAATGCAT...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATATGCATTTTTCCATCTaGGCCCTGGATGGGGTCATT +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDMHFSI*ALDGVI
Trigger: AATGACCCCATCCAGGGCCCAGATGGAAAAATGCAT...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTACACACTGGCACACATaGCACACTTGTTTCCATGCA +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGTHWHT*HTCFHA
Trigger: TGCATGGAAACAAGTGTGCCATGTGTGCCAGTGTGT...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGTGCATCTTGCCATATaGGCCTCGAACAGGGTTATT +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGVHLAI*ASNRVI
Trigger: AATAACCCTGTTCGAGGCCCATATGGCAAGATGCAC...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATGTGCATCTTGCCATATaGGCCTCGAACAGGGTTATT +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDVHLAI*ASNRVI
Trigger: AATAACCCTGTTCGAGGCCCATATGGCAAGATGCAC...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTTGAGGGCTCAGACTTaGTGGAGATGTCTTTATACC +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRLRAQT*WRCLYT
Trigger: GGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAA...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp TCCTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCCTCACAAAACTGCTCTaGATTACTGCTCTTACATTC +
Preference number: 4 (lower is better)
Translates to: SLQKSFSAFRRILVSPSRLTKLL*ITALTF
Trigger: GAATGTAAGAGCAGTAATCCAGAGCAGTTTTGTGAG...GCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR TCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGCTCTTTCTTCTTGTTaGAAGAAGGCCTCACACATG +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGALSSC*KKASHM
Trigger: CATGTGTGAGGCCTTCTTTCAACAAGAAGAAAGAGC...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCCTTCTTCTTCAAGTTTaGACACACTGGCACACATGG +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFLLLQV*THWHTW
Trigger: CCATGTGTGCCAGTGTGTTCAAACTTGAAGAAGAAG...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATCGTATCAGGTTTTCATaGCAGAGCATGCAAGGATTG +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDRIRFS*QSMQGL
Trigger: CAATCCTTGCATGCTCTGTCATGAAAACCTGATACG...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCGATGGTGAAGGTAGGTaGTTCAGAACTGGGGTTTAT +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFDGEGR*FRTGVY
Trigger: ATAAACCCCAGTTCTGAATCACCTACCTTCACCATC...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp TCCTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCATGTTTTCCCATCTGTaGCACAAACAGCTTCATAAT +
Preference number: 4 (lower is better)
Translates to: SLQKSFSAFRRILVSPSRMFSHL*HKQLHN
Trigger: ATTATGAAGCTGTTTGTGGCACAGATGGGAAAACAT...GCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR GCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATACATTGCACACTTATTaGCATGCGTCTTCCCATCAG +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDTLHTY*HASSHQ
Trigger: CTGATGGGAAGACGCATGGCAATAAGTGTGCAATGT...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATGAACACAAGTTGCCATaGATTTTCCCATCTGGACCA +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDEHKLP*IFPSGP
Trigger: TGGTCCAGATGGGAAAATGCATGGCAACTTGTGTTC...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGACATGGAACACAAGTTaGCATGCATTTTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRTWNTS*HAFSHL
Trigger: CAGATGGGAAAATGCATGGCAACTTGTGTTCCATGT...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGGCACAGCTCCTGAACTaGTTCTCTCTTAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRAQLLN*FSLNFF
Trigger: GAAAAAGTTAAGAGAGAAGCAGTTCAGGAGCTGTGC...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGAATGACGATATTCACTaGACAGCTCCTGAACTGCTT +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRNDDIH*TAPELL
Trigger: AAGCAGTTCAGGAGCTGTGCAGTGAATATCGTCATT...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATACTGGAACCATGTCCTaGAGCATTTCTCTGATCTTC +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDTGTMS*SISLIF
Trigger: GAAGATCAGAGAAATGCTGCAGGACATGGTTCCAGT...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGGATTGTTGTACGATTTaGCATCAGCATCACGTACAG +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRDCCTI*HQHHVQ
Trigger: CTGTACGTGATGCTGATGGCAAATCGTACAACAATC...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTCCTTTCTCCTGTATTaGTCCTGTCTTCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRSFLLY*SCLHPL
Trigger: AAGAGGATGAAGACAGGAGCAATACAGGAGAAAGGA...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCCATTATTTGAGGGCTTaGTACTTGATTTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLHYLRA*YLISLH
Trigger: ATGAAGAGAAATCAAGTAGCAAGCCCTCAAATAATG...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAAGTTTCGAAATTCACTaGACTCATCCTTTGCATTAT +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRSFEIH*THPLHY
Trigger: ATAATGCAAAGGATGAGTGCAGTGAATTTCGAAACT...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256084.8
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGATACTCGGTAGTCTTTaGACATCTCAGAATCCAGAG +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRILGSL*TSQNPE
Trigger: CTCTGGATTCTGAGATGTGCAAAGACTACCGAGTAT...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAAAAAATTTCTTATCCTaGGGACAGAACAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRKNFLS*GQNSFP
Trigger: TGGAAAACTGTTCTGTCCCCAGGATAAGAAATTTTT...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCAGTAGGCTTGACACATaGAACACAAGTTGCCATGCA +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFSRLDT*NTSCHA
Trigger: TGCATGGCAACTTGTGTTCCATGTGTCAAGCCTACT...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTAGTAGGCTTGACACATaGAACACAAGTTGCCATGCA +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGSRLDT*NTSCHA
Trigger: TGCATGGCAACTTGTGTTCCATGTGTCAAGCCTACT...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTTCATGGCACATTTCCTaGTCTTCATTCTTACTGGCA +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGSWHIS*SSFLLA
Trigger: TGCCAGTAAGAATGAAGATCAGGAAATGTGCCATGA...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCAAGACTGAAAATCAGTaGGTCCATTCCCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFKTENQ*VHSQKL
Trigger: GAGCTTTTGGGAATGGACTCACTGATTTTCAGTCTT...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATAAGACTGAAAATCAGTaGGTCCATTCCCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDKTENQ*VHSQKL
Trigger: GAGCTTTTGGGAATGGACTCACTGATTTTCAGTCTT...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCACATGGAACACAAGTTaGCATGCATTTTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFTWNTS*HAFSHL
Trigger: CAGATGGGAAAATGCATGGCAACTTGTGTTCCATGT...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCGCTTTCGATATTCACTaGAAAGCTCTGCATATGAGG +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFAFDIH*KALHMR
Trigger: CCTCATATGCAGAGCTTTGCAGTGAATATCGAAAGC...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGACTGCAGATTTCCTTTaGAGCTTCTCTTTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRTADFL*SFSFSL
Trigger: AAGGCTAAAAGAGAAGCTGCAAAGGAAATCTGCAGT...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTAATGACGATATTCACTaGACAGCTCCTGAACTGCTT +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGNDDIH*TAPELL
Trigger: AAGCAGTTCAGGAGCTGTGCAGTGAATATCGTCATT...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTTTTCTTTTGCTTCTTaGTGGAAGAAGGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRFSFAS*WKKASH
Trigger: GTGTGAAGCCTTCTTCCAGCAAGAAGCAAAAGAAAA...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCGATTGTTGTACGATTTaGCATCAGCATCACGTACAG +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFDCCTI*HQHHVQ
Trigger: CTGTACGTGATGCTGATGGCAAATCGTACAACAATC...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCTCCTTTCTCCTGTATTaGTCCTGTCTTCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFSFLLY*SCLHPL
Trigger: AAGAGGATGAAGACAGGAGCAATACAGGAGAAAGGA...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGAGCTTTCCATTTCTCTaGATGCTTCGAAATTCACGA +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRSFPFL*MLRNSR
Trigger: TCGTGAATTTCGAAGCATGCAGAGAAATGGAAAGCT...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCGCACATTTATTGATGTaGATCTTGCCATATGGGCCT +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFAHLLM*ILPYGP
Trigger: AGGCCCATATGGCAAGATGCACATCAATAAATGTGC...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTATACTCGGTAGTCTTTaGACATCTCAGAATCCAGAG +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGILGSL*TSQNPE
Trigger: CTCTGGATTCTGAGATGTGCAAAGACTACCGAGTAT...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTCACACTTCCCTGTACTaGGGATGTGTGTATTTGTTT +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGHTSLY*GCVYLF
Trigger: AAACAAATACACACATCCGCAGTACAGGGAAGTGTG...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCCATTCTGAACCTGTCTaGACTGGTCCTTTGCATTAT +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFHSEPV*TGPLHY
Trigger: ATAATGCAAAGGACCAGTGCAGACAGGTTCAGAATG...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359874.7
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGAGGTTGTCTAAATTTTaGATCCTCCGCTTCATTCTG +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRRLSKF*ILRFIL
Trigger: CAGAATGAAGCGGAGGATGCAAAATTTAGACAACCT...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359874.7
CDS-3UTR CCA 90 bp GCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTGGCATTTTCAGCTTCTTTTAAAAATTTCTTATCCTaGGGACAGAACAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: AFRRILVSPSRLAFSASFKNFLS*GQNSFP
Trigger: TGGAAAACTGTTCTGTCCCCAGGATAAGAAATTTTT...AAAAGAAGCTGAAAATGCCAAGCGAGAGGGTGAAACTAGAATTCGACGAAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCCTTTTTACACCAATTTaGGACCCGGTTTTCGCATTC +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFLFTPI*DPVFAF
Trigger: GAATGCGAAAACCGGGTCCCAAATTGGTGTAAAAAG...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCGCATACATCCTGCTCTaGATTACTGCTCTTACATTC +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFAYILL*ITALTF
Trigger: GAATGTAAGAGCAGTAATCCAGAGCAGGATGTATGC...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATAGCTCTAACATGGGATaGCTTTTCTTGAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDSSNMG*LFLKLC
Trigger: GCAAAGCTTCAAGAAAAGCCATCCCATGTTAGAGCT...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTTTACACATGGTACACTaGTTGTTGTACGATTTGCCA +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGLHMVH*LLYDLP
Trigger: TGGCAAATCGTACAACAATCAGTGTACCATGTGTAA...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATTTACACATGGTACACTaGTTGTTGTACGATTTGCCA +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDLHMVH*LLYDLP
Trigger: TGGCAAATCGTACAACAATCAGTGTACCATGTGTAA...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR TCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTCGATCAAAGATGCTCTaGCACATAGCACATTTATTG +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGRSKML*HIAHLL
Trigger: CAATAAATGTGCTATGTGTCAGAGCATCTTTGATCG...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGATGTTTTCCCATCTGTaGCACAAACAGCTTCATAAT +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRMFSHL*HKQLHN
Trigger: ATTATGAAGCTGTTTGTGGCACAGATGGGAAAACAT...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTTTGTTTCTAGCTCGTaGTTCAGCCTTTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRFVSSS*FSLFLF
Trigger: GAAAAGAAAAAGGCTGAAGCACGAGCTAGAAACAAA...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATACTGCAGATTTCCTTTaGAGCTTCTCTTTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDTADFL*SFSFSL
Trigger: AAGGCTAAAAGAGAAGCTGCAAAGGAAATCTGCAGT...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATTTCTCTTTTGACTTTTaGTCTGGGTTCAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDFSFDF*SGFSSF
Trigger: GAAAGAGCTGAACCCAGAGCAAAAGTCAAAAGAGAA...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTAGCTTTCCATTTCTCTaGATGCTTCGAAATTCACGA +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGSFPFL*MLRNSR
Trigger: TCGTGAATTTCGAAGCATGCAGAGAAATGGAAAGCT...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCTTAGAAAGACAGCTCTaGACATGTAGCACTTGTTTG +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFLERQL*TCSTCL
Trigger: CAAACAAGTGCTACATGTGCAGAGCTGTCTTTCTAA...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTTTTCACCCTCTCGCTTaGCATTTTCAGCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGFHPLA*HFQLLL
Trigger: TAAAAGAAGCTGAAAATGCCAAGCGAGAGGGTGAAA...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATCAGTCCCATTTGATCTaGAGCGAGAATACTCATTTT +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDQSHLI*SENTHF
Trigger: AAAATGAGTATTCTCGCTCCAGATCAAATGGGACTG...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTAAAGATAACCTATCCTaGGCAATACTCGGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGKDNLS*AILGSL
Trigger: AAGACTACCGAGTATTGCCCAGGATAGGTTATCTTT...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTATGTTTTCCCATCTGTaGCACAAACAGCTTCATAAT +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGMFSHL*HKQLHN
Trigger: ATTATGAAGCTGTTTGTGGCACAGATGGGAAAACAT...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTTTAGCCTTTGCTCTTaGTCTTTCTTCTTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRFSLCS*SFFLLK
Trigger: TTTCAACAAGAAGAAAGAGCAAGAGCAAAGGCTAAA...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CCA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGAAAAATTTCTTATCCTaGGGACAGAACAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRKNFLS*GQNSFP
Trigger: TGGAAAACTGTTCTGTCCCCAGGATAAGAAATTTTT...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTTTTAGCCTTTGCTCTTaGTCTTTCTTCTTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGFSLCS*SFFLLK
Trigger: TTTCAACAAGAAGAAAGAGCAAGAGCAAAGGCTAAA...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCTTCTCTTTCCAATTTTaGTTTACACATGGTACACTG +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFFSFQF*FTHGTL
Trigger: CAGTGTACCATGTGTAAAGCAAAATTGGAAAGAGAA...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATTTCTCTTTCCAATTTTaGTTTACACATGGTACACTG +
Preference number: 4 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDFSFQF*FTHGTL
Trigger: CAGTGTACCATGTGTAAAGCAAAATTGGAAAGAGAA...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR GCA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCCATTATTTGAGGGCTTaGTACTTGATTTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFHYLRA*YLISLH
Trigger: ATGAAGAGAAATCAAGTAGCAAGCCCTCAAATAATG...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS GCA 90 bp GTCATTCGTCAGACGGGGGCATGCTGGCTGCGGTGGTTCCTGGGGTaGTGCTCTCCTCACACTTCCCTGTACTGCGGATGTGTGTATTTG +
Preference number: 5 (lower is better)
Translates to: VIRQTGACWLRWFLG*CSPHTSLYCGCVYL
Trigger: CAAATACACACATCCGCAGTACAGGGAAGTGTGAGGAGAGCAGCACCCCAGGAACCACCGCAGCCAGCATGCCCCCGTCTGACGAATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS GCA 90 bp ATTCGTCAGACGGGGGCATGCTGGCTGCGGTGGTTCCTGGGGTGCTaGTCTCCTCACACTTCCCTGTACTGCGGATGTGTGTATTTGTTT +
Preference number: 5 (lower is better)
Translates to: IRQTGACWLRWFLGC*SPHTSLYCGCVYLF
Trigger: AAACAAATACACACATCCGCAGTACAGGGAAGTGTGAGGAGAGCAGCACCCCAGGAACCACCGCAGCCAGCATGCCCCCGTCTGACGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS GCA 90 bp CATCCTGGCAACAGAGGCCAAGGAACGCCCAGGTTGTCTAAATTTTaGATCCTCCGCTTCATTCTGAACCTGTCTGCACTGGTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: HPGNRGQGTPRLSKF*ILRFILNLSALVLC
Trigger: GCAAAGGACCAGTGCAGACAGGTTCAGAATGAAGCGGAGGATGCAAAATTTAGACAACCTGGGCGTTCCTTGGCCTCTGTTGCCAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359874.7
CDS TCA 90 bp AAAGAGCCAAGGGCAGAAGCACTGACACTGTGGCTATCTTCATGTTaGAGACGATGCAAGTCGCCTACAGGTCCACTCCATGCATTGCTC +
Preference number: 5 (lower is better)
Translates to: KEPRAEALTLWLSSC*RRCKSPTGPLHALL
Trigger: GAGCAATGCATGGAGTGGACCTGTAGGCGACTTGCATCGTCTTCAACATGAAGATAGCCACAGTGTCAGTGCTTCTGCCCTTGGCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256084.8
ENST00000359874.7
ENST00000398454.5
ENST00000476697.7
ENST00000507988.5
ENST00000508733.5
ENST00000521206.5
CDS TCA 90 bp ACTGGCAGCATCTTGTATGAGGCAAAGAGCCAAGGGCAGAAGCACTaGCACTGTGGCTATCTTCATGTTGAAGACGATGCAAGTCGCCTA +
Preference number: 5 (lower is better)
Translates to: TGSILYEAKSQGQKH*HCGYLHVEDDASRL
Trigger: TAGGCGACTTGCATCGTCTTCAACATGAAGATAGCCACAGTGTCAGTGCTTCTGCCCTTGGCTCTTTGCCTCATACAAGATGCTGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256084.8
ENST00000359874.7
ENST00000398454.5
ENST00000476697.7
ENST00000507988.5
ENST00000508733.5
ENST00000521206.5
CDS TCA 90 bp GCCTACAGGTCCACTCCATGCATTGCTCAGCTGGTGCAGTATGACTaGACTCGGGGCGATGCAGTTTACTTTTATAAAGCACTGGTGACA +
Preference number: 5 (lower is better)
Translates to: AYRSTPCIAQLVQYD*TRGDAVYFYKALVT
Trigger: TGTCACCAGTGCTTTATAAAAGTAAACTGCATCGCCCCGAGTTCAGTCATACTGCACCAGCTGAGCAATGCATGGAGTGGACCTGTAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521206.5
CDS GCA 90 bp CGATGCAAGTCGCCTACAGGTCCACTCCATGCATTGCTCAGCTGGTaGAGTATGACTGAACTCGGGGCGATGCAGTTTACTTTTATAAAG +
Preference number: 5 (lower is better)
Translates to: RCKSPTGPLHALLSW*SMTELGAMQFTFIK
Trigger: CTTTATAAAAGTAAACTGCATCGCCCCGAGTTCAGTCATACTGCACCAGCTGAGCAATGCATGGAGTGGACCTGTAGGCGACTTGCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521206.5
CDS CCA 90 bp AGACGATGCAAGTCGCCTACAGGTCCACTCCATGCATTGCTCAGCTaGTGCAGTATGACTGAACTCGGGGCGATGCAGTTTACTTTTATA +
Preference number: 5 (lower is better)
Translates to: RRCKSPTGPLHALLS*CSMTELGAMQFTFI
Trigger: TATAAAAGTAAACTGCATCGCCCCGAGTTCAGTCATACTGCACCAGCTGAGCAATGCATGGAGTGGACCTGTAGGCGACTTGCATCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521206.5
CDS-3UTR CAA 90 bp CTTGTGCATCCAAGTCTTCCATCTCTAACAAAGGGCCGAAAAGCACTGCATACAGGTCCACTCCATGCATaGCTCAGCTGGTGCAGTATG +
Preference number: 5 (lower is better)
Translates to: LVHPSLPSLTKGRKALHTGPLHA*LSWCSM
Trigger: CATACTGCACCAGCTGAGCAATGCATGGAGTGGACC...TGTATGCAGTGCTTTTCGGCCCTTTGTTAGAGATGGAAGACTTGGATGCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CAA 90 bp CTTGTGCATCCAAGTCTTCCATCTCTAACAAAGGGCCGAAAAGCACTGCATACAGTTGGGGCAGTAGCCTaGGGAGCTCTTGCTAAATGC +
Preference number: 5 (lower is better)
Translates to: LVHPSLPSLTKGRKALHTVGAVA*GALAKC
Trigger: GCATTTAGCAAGAGCTCCCAAGGCTACTGCCCCAAC...TGTATGCAGTGCTTTTCGGCCCTTTGTTAGAGATGGAAGACTTGGATGCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS GCA 90 bp CTTCCATCTCTAACAAAGGGCCGAAAAGCACTGCATACATCTATGTaGCAGAACTCAGACAGAGCACAGTCCTTGCCATCAACTTGCTCC +
Preference number: 5 (lower is better)
Translates to: LPSLTKGRKALHTSM*QNSDRAQSLPSTCS
Trigger: GGAGCAAGTTGATGGCAAGGACTGTGCTCTGTCTGAGTTCTGGCACATAGATGTATGCAGTGCTTTTCGGCCCTTTGTTAGAGATGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS GCA 90 bp CACTGCATACATCTATGTGCCAGAACTCAGACAGAGCACAGTCCTTaGCATCAACTTGCTCCCAATCTCCTGGAAAAAGACAAGTGTGAC +
Preference number: 5 (lower is better)
Translates to: HCIHLCARTQTEHSP*HQLAPNLLEKDKCD
Trigger: GTCACACTTGTCTTTTTCCAGGAGATTGGGAGCAAGTTGATGGCAAGGACTGTGCTCTGTCTGAGTTCTGGCACATAGATGTATGCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CAA 90 bp CTTGTGCATCCAAGTCTTCCATCTCTAACAAAGGGCCGAAAAGCACTGCATACAACAGCTCAGCACACATaGCACACTTATTGCCATGCG +
Preference number: 5 (lower is better)
Translates to: LVHPSLPSLTKGRKALHTTAQHT*HTYCHA
Trigger: CGCATGGCAATAAGTGTGCAATGTGTGCTGAGCTGT...TGTATGCAGTGCTTTTCGGCCCTTTGTTAGAGATGGAAGACTTGGATGCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS CCA 90 bp CTCAGACAGAGCACAGTCCTTGCCATCAACTTGCTCCCAATCTCCTaGAAAAAGACAAGTGTGACATGTATGAGATCCTTTCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LRQSTVLAINLLPIS*KKTSVTCMRSFLPS
Trigger: GGAAGGAAGAAAGGATCTCATACATGTCACACTTGTCTTTTTCCAGGAGATTGGGAGCAAGTTGATGGCAAGGACTGTGCTCTGTCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CAA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAGTGGCTATCTTCATGTaGAAGACGATGCAAGTCGCC +
Preference number: 5 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRVAIFM*KTMQVA
Trigger: GGCGACTTGCATCGTCTTCAACATGAAGATAGCCAC...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTCACAGGGCACATTTGTaGCCATGCATCCTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: LAKILFSISSNSSFTLSLHRAHL*PCILPS
Trigger: TGACGGCAGGATGCATGGCAACAAATGTGCCCTGTG...AAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CAA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCTGGGCTGTCTTCCTCTaGAGAAGCTCTAACATGGGA +
Preference number: 5 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLWAVFL*RSSNMG
Trigger: TCCCATGTTAGAGCTTCTCAAGAGGAAGACAGCCCA...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGGATTGTTGTAGGTTaGGCCATCGTCACCACAGAC +
Preference number: 5 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLRIVVG*AIVTTD
Trigger: GTCTGTGGTGACGATGGCCAAACCTACAACAATCCT...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAAGGATTGTTGTAGGTTaGGCCATCGTCACCACAGAC +
Preference number: 5 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRRIVVG*AIVTTD
Trigger: GTCTGTGGTGACGATGGCCAAACCTACAACAATCCT...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp GCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTGGCATTTTCAGCTTCTTTTGACAGAGCACAGTCCTaGCCATCAACTTGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: AFRRILVSPSRLAFSASFDRAQS*PSTCSQ
Trigger: TTGGGAGCAAGTTGATGGCAAGGACTGTGCTCTGTC...AAAAGAAGCTGAAAATGCCAAGCGAGAGGGTGAAACTAGAATTCGACGAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS TCA 90 bp TTTCCTCCTCCACCACCACTGGAACCATGTCCTGCAGCATTTCTCTaGTCTTCCTCTTCTTTCCTCTTTCTTTCCTCATTTTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: FPPPPPLEPCPAAFL*SSSSFLFLSSFSFW
Trigger: CCAGAAAGAAAATGAGGAAAGAAAGAGGAAAGAAGAGGAAGATCAGAGAAATGCTGCAGGACATGGTTCCAGTGGTGGTGGAGGAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256084.8
ENST00000359874.7
ENST00000398454.5
ENST00000507988.5
ENST00000508733.5
CDS-3UTR CAA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGGGTCCACTCCATGCATaGCTCAGCTGGTGCAGTATG +
Preference number: 5 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRGPLHA*LSWCSM
Trigger: CATACTGCACCAGCTGAGCAATGCATGGAGTGGACC...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCCTTACTGGCAGCATCTaGTATGAGGCAAAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLLTGSI*YEAKSQ
Trigger: TTGGCTCTTTGCCTCATACAAGATGCTGCCAGTAAG...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGACACATTGCACACTTATaGCCATGCGTCTTCCCATCA +
Preference number: 5 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRHIAHL*PCVFPS
Trigger: TGATGGGAAGACGCATGGCAATAAGTGTGCAATGTG...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CTTGTGCATCCAAGTCTTCCATCTCTAACAAAGGGCCGAAAAGCACTGCATACAGTTTCACCCTCTCGCTaGGCATTTTCAGCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: LVHPSLPSLTKGRKALHTVSPSR*AFSASF
Trigger: AAAAGAAGCTGAAAATGCCAAGCGAGAGGGTGAAAC...TGTATGCAGTGCTTTTCGGCCCTTTGTTAGAGATGGAAGACTTGGATGCACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CAA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGCACAGGGCACATTTGTaGCCATGCATCCTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRHRAHL*PCILPS
Trigger: TGACGGCAGGATGCATGGCAACAAATGTGCCCTGTG...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGACAAGGAACGCCCAGGTaGTCTAAATTTTGCATCCTC +
Preference number: 5 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRQGTPR*SKFCIL
Trigger: GAGGATGCAAAATTTAGACAACCTGGGCGTTCCTTG...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359874.7
CDS CCA 90 bp CACCACAGACAGGCTTTAAATCCTTTGGACAAAGATAACCTATCCTaGGCAATACTCGGTAGTCTTTGCACATCTCAGAATCCAGAGAAC +
Preference number: 5 (lower is better)
Translates to: HHRQALNPLDKDNLS*AILGSLCTSQNPEN
Trigger: GTTCTCTGGATTCTGAGATGTGCAAAGACTACCGAGTATTGCCCAGGATAGGTTATCTTTGTCCAAAGGATTTAAAGCCTGTCTGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATGGTCCACTCCATGCATaGCTCAGCTGGTGCAGTATG +
Preference number: 5 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDGPLHA*LSWCSM
Trigger: CATACTGCACCAGCTGAGCAATGCATGGAGTGGACC...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGTTGGGGCAGTAGCCTaGGGAGCTCTTGCTAAATGC +
Preference number: 5 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGVGAVA*GALAKC
Trigger: GCATTTAGCAAGAGCTCCCAAGGCTACTGCCCCAAC...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATGTTGGGGCAGTAGCCTaGGGAGCTCTTGCTAAATGC +
Preference number: 5 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDVGAVA*GALAKC
Trigger: GCATTTAGCAAGAGCTCCCAAGGCTACTGCCCCAAC...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CTTGTGCATCCAAGTCTTCCATCTCTAACAAAGGGCCGAAAAGCACTGCATACACACAGTGCACATCTGTaGTCATATGTTTTCCCATCT +
Preference number: 5 (lower is better)
Translates to: LVHPSLPSLTKGRKALHTHSAHL*SYVFPS
Trigger: AGATGGGAAAACATATGACAACAGATGTGCACTGTG...TGTATGCAGTGCTTTTCGGCCCTTTGTTAGAGATGGAAGACTTGGATGCACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CAA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAGTTTCACCCTCTCGCTaGGCATTTTCAGCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRVSPSR*AFSASF
Trigger: AAAAGAAGCTGAAAATGCCAAGCGAGAGGGTGAAAC...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATCACAGGGCACATTTGTaGCCATGCATCCTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDHRAHL*PCILPS
Trigger: TGACGGCAGGATGCATGGCAACAAATGTGCCCTGTG...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCTGCTTGGAAGTAGGCTaGACACATGGAACACAAGTT +
Preference number: 5 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLCLEVG*THGTQV
Trigger: AACTTGTGTTCCATGTGTCAAGCCTACTTCCAAGCA...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGACCGTTTTTCCTGGATTaGCGGTATTCACTACACAAC +
Preference number: 5 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRPFFLD*RYSLHN
Trigger: GTTGTGTAGTGAATACCGCAAATCCAGGAAAAACGG...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCTTATTGATGTGCATCTaGCCATATGGGCCTCGAACA +
Preference number: 5 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLLLMCI*PYGPRT
Trigger: TGTTCGAGGCCCATATGGCAAGATGCACATCAATAA...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAGCTTTTCTTGAAGCTTaGCCCTTTCCAAAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRAFLEA*PFPKLL
Trigger: CAGAAGCTTTGGAAAGGGCAAAGCTTCAAGAAAAGC...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCATGGGATGGCTTTTCTaGAAGCTTTGCCCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLMGWLF*KLCPFQ
Trigger: TTGGAAAGGGCAAAGCTTCAAGAAAAGCCATCCCAT...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCTTTGAGGGCTCAGACTaGGTGGAGATGTCTTTATAC +
Preference number: 5 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLFEGSD*VEMSLY
Trigger: GTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAA...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS GCA 90 bp CCGAAATTCACTGCAGATTTCCTTTGCAGCTTCTCTTTTAGCCTTTaGTCTTGCTCTTTCTTCTTGTTGAAAGAAGGCCTCACACATGGA +
Preference number: 5 (lower is better)
Translates to: PKFTADFLCSFSFSL*SCSFFLLKEGLTHG
Trigger: TCCATGTGTGAGGCCTTCTTTCAACAAGAAGAAAGAGCAAGAGCAAAGGCTAAAAGAGAAGCTGCAAAGGAAATCTGCAGTGAATTTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256084.8
ENST00000359874.7
ENST00000398454.5
ENST00000507988.5
ENST00000508733.5
CDS-3UTR CAA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGGTGGCTATCTTCATGTaGAAGACGATGCAAGTCGCC +
Preference number: 5 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRVAIFM*KTMQVA
Trigger: GGCGACTTGCATCGTCTTCAACATGAAGATAGCCAC...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTCTTACTGGCAGCATCTaGTATGAGGCAAAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: LAKILFSISSNSSFTLSLLTGSI*YEAKSQ
Trigger: TTGGCTCTTTGCCTCATACAAGATGCTGCCAGTAAG...AAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CAA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCCACAGTGCACATCTGTaGTCATATGTTTTCCCATCT +
Preference number: 5 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLHSAHL*SYVFPS
Trigger: AGATGGGAAAACATATGACAACAGATGTGCACTGTG...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTCACATTGCACACTTATaGCCATGCGTCTTCCCATCA +
Preference number: 5 (lower is better)
Translates to: LAKILFSISSNSSFTLSLHIAHL*PCVFPS
Trigger: TGATGGGAAGACGCATGGCAATAAGTGTGCAATGTG...AAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CAA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCGCTCTGCATATGAGGTaGCTTTTCCAGATTCTCTTT +
Preference number: 5 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLALHMR*LFQILF
Trigger: AAAGAGAATCTGGAAAAGCAACCTCATATGCAGAGC...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGATTCTTCTTCTTCTGCTaGGAAGAAGACCTCACACAT +
Preference number: 5 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRFFFFC*EEDLTH
Trigger: ATGTGTGAGGTCTTCTTCCAAGCAGAAGAAGAAGAA...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCTGCTCTTTCTTCTTGTaGAAAGAAGGCCTCACACAT +
Preference number: 5 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLCSFFL*KEGLTH
Trigger: ATGTGTGAGGCCTTCTTTCAACAAGAAGAAAGAGCA...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGGTCTGCACTGGTCCTTaGCATTATTTGAGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRVCTGP*HYLRAC
Trigger: GCAAGCCCTCAAATAATGCAAAGGACCAGTGCAGAC...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359874.7
CDS GCA 90 bp ATTCACGACACAGATCCTCTTTGTCATTGCTCCTTTCTCCTGTATTaGTCCTTTCTCCTGTATTGCTCCTGTCTTCATCCTCTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: IHDTDPLCHCSFLLY*SFLLYCSCLHPLSF
Trigger: AAAAGAAAGAGGATGAAGACAGGAGCAATACAGGAGAAAGGAGCAATACAGGAGAAAGGAGCAATGACAAAGAGGATCTGTGTCGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256084.8
ENST00000359874.7
ENST00000398454.5
ENST00000508733.5
CDS CCA 90 bp CATGTAGCACTTGTTTGTATAGAACTTTCCATCAGCACCGTGCACTaGGTCATTCTCTCTAGGGCAGATGAGTTCATTGTTCCTTATATA +
Preference number: 5 (lower is better)
Translates to: HVALVCIELSISTVH*VILSRADEFIVPYI
Trigger: TATATAAGGAACAATGAACTCATCTGCCCTAGAGAGAATGACCCAGTGCACGGTGCTGATGGAAAGTTCTATACAAACAAGTGCTACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp TCCTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCACTTTTTACACCAATTaGGGACCCGGTTTTCGCATT +
Preference number: 5 (lower is better)
Translates to: SLQKSFSAFRRILVSPSRTFYTN*GPGFRI
Trigger: AATGCGAAAACCGGGTCCCAAATTGGTGTAAAAAGT...GCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CAA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCACAGCTCAGCACACATaGCACACTTATTGCCATGCG +
Preference number: 5 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFTAQHT*HTYCHA
Trigger: CGCATGGCAATAAGTGTGCAATGTGTGCTGAGCTGT...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTACAGCTCAGCACACATaGCACACTTATTGCCATGCG +
Preference number: 5 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGTAQHT*HTYCHA
Trigger: CGCATGGCAATAAGTGTGCAATGTGTGCTGAGCTGT...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCTTTCCAGATTCTCTTTaGTTTCTAGCTCGTGCTTCA +
Preference number: 5 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLFPDSL*FLARAS
Trigger: TGAAGCACGAGCTAGAAACAAAAGAGAATCTGGAAA...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGTTCCATTCCTCACTaGGTCCCGAAATTCACTGCA +
Preference number: 5 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRCSIPH*VPKFTA
Trigger: TGCAGTGAATTTCGGGACCAAGTGAGGAATGGAACA...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGACATCCTTTGCATTATTaGAGGGCTTGCTACTTGATT +
Preference number: 5 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRHPLHY*RACYLI
Trigger: AATCAAGTAGCAAGCCCTCAAATAATGCAAAGGATG...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256084.8
CDS-3UTR CAA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGCACTGCACTCATCCTTaGCATTATTTGAGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRHCTHP*HYLRAC
Trigger: GCAAGCCCTCAAATAATGCAAAGGATGAGTGCAGTG...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256084.8
CDS-3UTR CAA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATTGGGCTGTCTTCCTCTaGAGAAGCTCTAACATGGGA +
Preference number: 5 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDWAVFL*RSSNMG
Trigger: TCCCATGTTAGAGCTTCTCAAGAGGAAGACAGCCCA...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCGATGTGTGTATTTGTTaGGCGTATCAGGTTTTCATG +
Preference number: 5 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLDVCIC*AYQVFM
Trigger: CATGAAAACCTGATACGCCAAACAAATACACACATC...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGAGATGTGTGTATTTGTTaGGCGTATCAGGTTTTCATG +
Preference number: 5 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRDVCIC*AYQVFM
Trigger: CATGAAAACCTGATACGCCAAACAAATACACACATC...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp TGTAATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCGCTCCGAAGAATTCTTaGTATATACAGATGGTGAAG +
Preference number: 5 (lower is better)
Translates to: CNQDILRAQTWWRCLYTLAPKNS*YIQMVK
Trigger: CTTCACCATCTGTATATACAAAGAATTCTTCGGAGC...GAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGTAATCAGGACATTTaGAGGGCTCAGACTTGGTGG +
Preference number: 5 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRCNQDI*RAQTWW
Trigger: CCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGACTGAGTTTACTTTTATaGAACAGGCAGTTGGACAGA +
Preference number: 5 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRLSLLL*NRQLDR
Trigger: TCTGTCCAACTGCCTGTTCAATAAAAGTAAACTCAG...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCCTTACTGGCAGCATCTaGTATGAGGCAAAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFLTGSI*YEAKSQ
Trigger: TTGGCTCTTTGCCTCATACAAGATGCTGCCAGTAAG...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGACACGTGGCACATTTATaGATGAACATTATTCCATCA +
Preference number: 5 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRHVAHL*MNIIPS
Trigger: TGATGGAATAATGTTCATCAATAAATGTGCCACGTG...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp AATCAGGACATTTTGAGGGCTCAGACTTGGTGGAGATGTCTTTATACCCTCAGATTTTCCAGTATCATTTaGCACGTGGCACATTTATTG +
Preference number: 5 (lower is better)
Translates to: NQDILRAQTWWRCLYTLRFSSII*HVAHLL
Trigger: CAATAAATGTGCCACGTGCAAAATGATACTGGAAAA...TCTGAGGGTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAAATGTCCTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATCACATTGCACACTTATaGCCATGCGTCTTCCCATCA +
Preference number: 5 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDHIAHL*PCVFPS
Trigger: TGATGGGAAGACGCATGGCAATAAGTGTGCAATGTG...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATCTGATCCAGTCCCATTaGATCTGGAGCGAGAATACT +
Preference number: 5 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDLIQSH*IWSENT
Trigger: AGTATTCTCGCTCCAGATCAAATGGGACTGGATCAG...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCCTGATCCAGTCCCATTaGATCTGGAGCGAGAATACT +
Preference number: 5 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFLIQSH*IWSENT
Trigger: AGTATTCTCGCTCCAGATCAAATGGGACTGGATCAG...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGATGGGATGGCTTTTCTaGAAGCTTTGCCCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRMGWLF*KLCPFQ
Trigger: TTGGAAAGGGCAAAGCTTCAAGAAAAGCCATCCCAT...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTTTGAGGGCTCAGACTaGGTGGAGATGTCTTTATAC +
Preference number: 5 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRFEGSD*VEMSLY
Trigger: GTATAAAGACATCTCCACCAAGTCTGAGCCCTCAAA...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTTGTAATCAGGACATTTaGAGGGCTCAGACTTGGTGG +
Preference number: 5 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGCNQDI*RAQTWW
Trigger: CCACCAAGTCTGAGCCCTCAAAATGTCCTGATTACA...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATGTTTCACCCTCTCGCTaGGCATTTTCAGCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDVSPSR*AFSASF
Trigger: AAAAGAAGCTGAAAATGCCAAGCGAGAGGGTGAAAC...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTTGCTTGGAAGTAGGCTaGACACATGGAACACAAGTT +
Preference number: 5 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGCLEVG*THGTQV
Trigger: AACTTGTGTTCCATGTGTCAAGCCTACTTCCAAGCA...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTCCGTTTTTCCTGGATTaGCGGTATTCACTACACAAC +
Preference number: 5 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGPFFLD*RYSLHN
Trigger: GTTGTGTAGTGAATACCGCAAATCCAGGAAAAACGG...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATTTATTGATGTGCATCTaGCCATATGGGCCTCGAACA +
Preference number: 5 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDLLMCI*PYGPRT
Trigger: TGTTCGAGGCCCATATGGCAAGATGCACATCAATAA...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGCGGATGTGTGTATTaGTTTGGCGTATCAGGTTTT +
Preference number: 5 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRCGCVY*FGVSGF
Trigger: AAAACCTGATACGCCAAACAAATACACACATCCGCA...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTCACGTGGCACATTTATaGATGAACATTATTCCATCA +
Preference number: 5 (lower is better)
Translates to: LAKILFSISSNSSFTLSLHVAHL*MNIIPS
Trigger: TGATGGAATAATGTTCATCAATAAATGTGCCACGTG...AAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CAA 90 bp CTTGCAAAAATCCTTTTCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTTTTTTCCAGTATCATTTaGCACGTGGCACATTTATTG +
Preference number: 5 (lower is better)
Translates to: LAKILFSISSNSSFTLSLFSSII*HVAHLL
Trigger: CAATAAATGTGCCACGTGCAAAATGATACTGGAAAA...AAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGATTTTTGCAAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS-3UTR CAA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTCACAGTGCACATCTGTaGTCATATGTTTTCCCATCT +
Preference number: 5 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGHSAHL*SYVFPS
Trigger: AGATGGGAAAACATATGACAACAGATGTGCACTGTG...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATACTTTTTACACCAATTaGGGACCCGGTTTTCGCATT +
Preference number: 5 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDTFYTN*GPGFRI
Trigger: AATGCGAAAACCGGGTCCCAAATTGGTGTAAAAAGT...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCACTTTTTACACCAATTaGGGACCCGGTTTTCGCATT +
Preference number: 5 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFTFYTN*GPGFRI
Trigger: AATGCGAAAACCGGGTCCCAAATTGGTGTAAAAAGT...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATGCTCTGCATATGAGGTaGCTTTTCCAGATTCTCTTT +
Preference number: 5 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDALHMR*LFQILF
Trigger: AAAGAGAATCTGGAAAAGCAACCTCATATGCAGAGC...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTTTCTTCTTCTTCTGCTaGGAAGAAGACCTCACACAT +
Preference number: 5 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGFFFFC*EEDLTH
Trigger: ATGTGTGAGGTCTTCTTCCAAGCAGAAGAAGAAGAA...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATTGCTCTTTCTTCTTGTaGAAAGAAGGCCTCACACAT +
Preference number: 5 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDCSFFL*KEGLTH
Trigger: ATGTGTGAGGCCTTCTTTCAACAAGAAGAAAGAGCA...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTCTTCCATTTTTCATTaGTTCCCGATACTCAGCACA +
Preference number: 5 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRSSIFH*FPILST
Trigger: TGTGCTGAGTATCGGGAACAAATGAAAAATGGAAGA...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCTGCGGATGTGTGTATTaGTTTGGCGTATCAGGTTTT +
Preference number: 5 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFCGCVY*FGVSGF
Trigger: AAAACCTGATACGCCAAACAAATACACACATCCGCA...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGGTCCTTTGCATTATTaGAGGGCTTGCTACTTGATT +
Preference number: 5 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGGPLHY*RACYLI
Trigger: AATCAAGTAGCAAGCCCTCAAATAATGCAAAGGACC...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359874.7
CDS-3UTR CAA 90 bp GCAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGCCTGATTTTGATATaGACTGCAGAGTTTCACAAT +
Preference number: 5 (lower is better)
Translates to: ANKTSSEEFFVYTDGEGRCLILI*TAEFHN
Trigger: ATTGTGAAACTCTGCAGTCAATATCAAAATCAGGCA...CCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTTTTCCAGATTCTCTTTaGTTTCTAGCTCGTGCTTCA +
Preference number: 5 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGFPDSL*FLARAS
Trigger: TGAAGCACGAGCTAGAAACAAAAGAGAATCTGGAAA...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATTTTTTCTTTTGCTTCTaGCTGGAAGAAGGCTTCACA +
Preference number: 5 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDFFFCF*LEEGFT
Trigger: TGTGAAGCCTTCTTCCAGCAAGAAGCAAAAGAAAAA...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTTTTTTCTTTTGCTTCTaGCTGGAAGAAGGCTTCACA +
Preference number: 5 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGFFFCF*LEEGFT
Trigger: TGTGAAGCCTTCTTCCAGCAAGAAGCAAAAGAAAAA...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCTTTTCAGCTTCTCTTTaGACTTTTGCTCTGGGTTCA +
Preference number: 5 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFFSASL*TFALGS
Trigger: TGAACCCAGAGCAAAAGTCAAAAGAGAAGCTGAAAA...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCTCTTCCATTTTTCATTaGTTCCCGATACTCAGCACA +
Preference number: 5 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFSSIFH*FPILST
Trigger: TGTGCTGAGTATCGGGAACAAATGAAAAATGGAAGA...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCCAGGCTTTAAATCCTTaGGACAAAGATAACCTATCC +
Preference number: 5 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFQALNP*DKDNLS
Trigger: GGATAGGTTATCTTTGTCCAAAGGATTTAAAGCCTG...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATCAGGCTTTAAATCCTTaGGACAAAGATAACCTATCC +
Preference number: 5 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDQALNP*DKDNLS
Trigger: GGATAGGTTATCTTTGTCCAAAGGATTTAAAGCCTG...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATGCTCCGAAGAATTCTTaGTATATACAGATGGTGAAG +
Preference number: 5 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDAPKNS*YIQMVK
Trigger: CTTCACCATCTGTATATACAAAGAATTCTTCGGAGC...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CAAATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTCTGAGTTTACTTTTATaGAACAGGCAGTTGGACAGA +
Preference number: 5 (lower is better)
Translates to: QIRQAPKNSLYIQMVKVGLSLLL*NRQLDR
Trigger: TCTGTCCAACTGCCTGTTCAATAAAAGTAAACTCAG...ACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp CCCAAAAGCTCTGTATTGTTTTCTATAGCAAATAAGACAAGCTCCGAAGAATTCCACGTGGCACATTTATaGATGAACATTATTCCATCA +
Preference number: 5 (lower is better)
Translates to: PKSSVLFSIANKTSSEEFHVAHL*MNIIPS
Trigger: TGATGGAATAATGTTCATCAATAAATGTGCCACGTG...GAATTCTTCGGAGCTTGTCTTATTTGCTATAGAAAACAATACAGAGCTTTTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS-3UTR CAA 90 bp ATAAGACAAGCTCCGAAGAATTCTTTGTATATACAGATGGTGAAGGTAGGTGATACATGTAGCACTTGTTaGTATAGAACTTTCCATCAG +
Preference number: 5 (lower is better)
Translates to: IRQAPKNSLYIQMVKVGDTCSTC*YRTFHQ
Trigger: CTGATGGAAAGTTCTATACAAACAAGTGCTACATGT...ATCACCTACCTTCACCATCTGTATATACAAAGAATTCTTCGGAGCTTGTCTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS GCA 72 bp ACGGGGGCATGCTGGCTGCGGTGGTTCCTGGGGTGCTaGTCTCCTCACACTTCCCTGTACTGCGGATGTGTG +
Preference number: 6 (lower is better)
Translates to: TGACWLRWFLGC*SPHTSLYCGCV
Trigger: CACACATCCGCAGTACAGGGAAGTGTGAGGAGAGCAGCACCCCAGGAACCACCGCAGCCAGCATGCCCCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS GCA 72 bp CAGACGGGGGCATGCTGGCTGCGGTGGTTCCTGGGGTaGTGCTCTCCTCACACTTCCCTGTACTGCGGATGT +
Preference number: 6 (lower is better)
Translates to: QTGACWLRWFLG*CSPHTSLYCGC
Trigger: ACATCCGCAGTACAGGGAAGTGTGAGGAGAGCAGCACCCCAGGAACCACCGCAGCCAGCATGCCCCCGTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS CCA 72 bp AACAATCTTCCTGTCATTCGTCAGACGGGGGCATGCTaGCTGCGGTGGTTCCTGGGGTGCTGCTCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: NNLPVIRQTGAC*LRWFLGCCSPH
Trigger: GTGAGGAGAGCAGCACCCCAGGAACCACCGCAGCCAGCATGCCCCCGTCTGACGAATGACAGGAAGATTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS CAA 72 bp AGACGATGCAAGTCGCCTACAGGTCCACTCCATGCATaGCTCAGCTGGTGCAGTATGACTGAACTCGGGGCG +
Preference number: 6 (lower is better)
Translates to: RRCKSPTGPLHA*LSWCSMTELGA
Trigger: CGCCCCGAGTTCAGTCATACTGCACCAGCTGAGCAATGCATGGAGTGGACCTGTAGGCGACTTGCATCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521206.5
CDS GCA 72 bp TCGCCTACAGGTCCACTCCATGCATTGCTCAGCTGGTaGAGTATGACTGAACTCGGGGCGATGCAGTTTACT +
Preference number: 6 (lower is better)
Translates to: SPTGPLHALLSW*SMTELGAMQFT
Trigger: AGTAAACTGCATCGCCCCGAGTTCAGTCATACTGCACCAGCTGAGCAATGCATGGAGTGGACCTGTAGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521206.5
CDS CCA 72 bp AAGTCGCCTACAGGTCCACTCCATGCATTGCTCAGCTaGTGCAGTATGACTGAACTCGGGGCGATGCAGTTT +
Preference number: 6 (lower is better)
Translates to: KSPTGPLHALLS*CSMTELGAMQF
Trigger: AAACTGCATCGCCCCGAGTTCAGTCATACTGCACCAGCTGAGCAATGCATGGAGTGGACCTGTAGGCGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521206.5
CDS CAA 90 bp CAAAGAGCCAAGGGCAGAAGCACTGACACTGTGGCTATCTTCATGTaGAAGACGATGCAAGTCGCCTACAGGTCCACTCCATGCATTGCT +
Preference number: 6 (lower is better)
Translates to: QRAKGRSTDTVAIFM*KTMQVAYRSTPCIA
Trigger: AGCAATGCATGGAGTGGACCTGTAGGCGACTTGCATCGTCTTCAACATGAAGATAGCCACAGTGTCAGTGCTTCTGCCCTTGGCTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256084.8
ENST00000359874.7
ENST00000398454.5
ENST00000476697.7
ENST00000507988.5
ENST00000508733.5
ENST00000521206.5
CDS GCA 72 bp AACAGAGGCCAAGGAACGCCCAGGTTGTCTAAATTTTaGATCCTCCGCTTCATTCTGAACCTGTCTGCACTG +
Preference number: 6 (lower is better)
Translates to: NRGQGTPRLSKF*ILRFILNLSAL
Trigger: CAGTGCAGACAGGTTCAGAATGAAGCGGAGGATGCAAAATTTAGACAACCTGGGCGTTCCTTGGCCTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359874.7
CDS CAA 72 bp AAATCATCACAATTCAGCTCTGTTGGGGCAGTAGCCTaGGGAGCTCTTGCTAAATGCCTGGCCCTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: KSSQFSSVGAVA*GALAKCLALFC
Trigger: ACAGAAGAGGGCCAGGCATTTAGCAAGAGCTCCCAAGGCTACTGCCCCAACAGAGCTGAATTGTGATGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256084.8
ENST00000359874.7
ENST00000398454.5
ENST00000476697.7
ENST00000507988.5
ENST00000508733.5
CDS CAA 72 bp ACTCATCCTGGCAACAGAGGCCAAGGAACGCCCAGGTaGTCTAAATTTTGCATCCTCCGCTTCATTCTGAAC +
Preference number: 6 (lower is better)
Translates to: THPGNRGQGTPR*SKFCILRFILN
Trigger: GTTCAGAATGAAGCGGAGGATGCAAAATTTAGACAACCTGGGCGTTCCTTGGCCTCTGTTGCCAGGATGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359874.7
CDS GCA 72 bp CTAACAAAGGGCCGAAAAGCACTGCATACATCTATGTaGCAGAACTCAGACAGAGCACAGTCCTTGCCATCA +
Preference number: 6 (lower is better)
Translates to: LTKGRKALHTSM*QNSDRAQSLPS
Trigger: TGATGGCAAGGACTGTGCTCTGTCTGAGTTCTGGCACATAGATGTATGCAGTGCTTTTCGGCCCTTTGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS TCA 72 bp ATCTTGTATGAGGCAAAGAGCCAAGGGCAGAAGCACTaGCACTGTGGCTATCTTCATGTTGAAGACGATGCA +
Preference number: 6 (lower is better)
Translates to: ILYEAKSQGQKH*HCGYLHVEDDA
Trigger: TGCATCGTCTTCAACATGAAGATAGCCACAGTGTCAGTGCTTCTGCCCTTGGCTCTTTGCCTCATACAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256084.8
ENST00000359874.7
ENST00000398454.5
ENST00000476697.7
ENST00000507988.5
ENST00000508733.5
ENST00000521206.5
CDS TCA 72 bp TCCACTCCATGCATTGCTCAGCTGGTGCAGTATGACTaGACTCGGGGCGATGCAGTTTACTTTTATAAAGCA +
Preference number: 6 (lower is better)
Translates to: STPCIAQLVQYD*TRGDAVYFYKA
Trigger: TGCTTTATAAAAGTAAACTGCATCGCCCCGAGTTCAGTCATACTGCACCAGCTGAGCAATGCATGGAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521206.5
CDS CCA 72 bp TGGGCTGTCTTCCTCTTGAGAAGCTCTAACATGGGATaGCTTTTCTTGAAGCTTTGCCCTTTCCAAAGCTTC +
Preference number: 6 (lower is better)
Translates to: WAVFLLRSSNMG*LFLKLCPFQSF
Trigger: GAAGCTTTGGAAAGGGCAAAGCTTCAAGAAAAGCCATCCCATGTTAGAGCTTCTCAAGAGGAAGACAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS CAA 72 bp ATGCTCCCTGGTGCATATAAGTGTTCCATTCCTCACTaGGTCCCGAAATTCACTGCAGATTTCCTTTGCAGC +
Preference number: 6 (lower is better)
Translates to: MLPGAYKCSIPH*VPKFTADFLCS
Trigger: GCTGCAAAGGAAATCTGCAGTGAATTTCGGGACCAAGTGAGGAATGGAACACTTATATGCACCAGGGAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256084.8
ENST00000359874.7
ENST00000398454.5
ENST00000507988.5
ENST00000508733.5
CDS CAA 72 bp ACATCTATGTGCCAGAACTCAGACAGAGCACAGTCCTaGCCATCAACTTGCTCCCAATCTCCTGGAAAAAGA +
Preference number: 6 (lower is better)
Translates to: TSMCQNSDRAQS*PSTCSQSPGKR
Trigger: TCTTTTTCCAGGAGATTGGGAGCAAGTTGATGGCAAGGACTGTGCTCTGTCTGAGTTCTGGCACATAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS CAA 90 bp CCAAAGCTTCTGTTAGAAAGACAGCTCTGCACATGTAGCACTTGTTaGTATAGAACTTTCCATCAGCACCGTGCACTGGGTCATTCTCTC +
Preference number: 6 (lower is better)
Translates to: PKLLLERQLCTCSTC*YRTFHQHRALGHSL
Trigger: GAGAGAATGACCCAGTGCACGGTGCTGATGGAAAGTTCTATACAAACAAGTGCTACATGTGCAGAGCTGTCTTTCTAACAGAAGCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS CAA 90 bp TGTTGTAGGTTTGGCCATCGTCACCACAGACAGGCTTTAAATCCTTaGGACAAAGATAACCTATCCTGGGCAATACTCGGTAGTCTTTGC +
Preference number: 6 (lower is better)
Translates to: CCRFGHRHHRQALNP*DKDNLSWAILGSLC
Trigger: GCAAAGACTACCGAGTATTGCCCAGGATAGGTTATCTTTGTCCAAAGGATTTAAAGCCTGTCTGTGGTGACGATGGCCAAACCTACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS CAA 90 bp ATCTATGTGCCAGAACTCAGACAGAGCACAGTCCTTGCCATCAACTaGCTCCCAATCTCCTGGAAAAAGACAAGTGTGACATGTATGAGA +
Preference number: 6 (lower is better)
Translates to: IYVPELRQSTVLAIN*LPISWKKTSVTCMR
Trigger: TCTCATACATGTCACACTTGTCTTTTTCCAGGAGATTGGGAGCAAGTTGATGGCAAGGACTGTGCTCTGTCTGAGTTCTGGCACATAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476697.7
CDS GCA 72 bp TTGCTTTACACATGGTACACTGATTGTTGTACGATTTaGCATCAGCATCACGTACAGGATCACTCTCCCGAG +
Preference number: 6 (lower is better)
Translates to: LLYTWYTDCCTI*HQHHVQDHSPE
Trigger: CTCGGGAGAGTGATCCTGTACGTGATGCTGATGGCAAATCGTACAACAATCAGTGTACCATGTGTAAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256084.8
ENST00000359874.7
ENST00000398454.5
ENST00000507988.5
ENST00000508733.5
CDS CAA 72 bp GAGCTCTTGCTAAATGCCTGGCCCTCTTCTGTGATTTaGCTTCTTTTTCCAGTATCATTTTGCACGTGGCAC +
Preference number: 6 (lower is better)
Translates to: ELLLNAWPSSVI*LLFPVSFCTWH
Trigger: GTGCCACGTGCAAAATGATACTGGAAAAAGAAGCAAAATCACAGAAGAGGGCCAGGCATTTAGCAAGAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000256084.8
ENST00000359874.7
ENST00000398454.5
ENST00000476697.7
ENST00000507988.5
ENST00000508733.5
ENST00000521206.5
CDS CAA 72 bp TTTGGCCATCGTCACCACAGACAGGCTTTAAATCCTTaGGACAAAGATAACCTATCCTGGGCAATACTCGGT +
Preference number: 6 (lower is better)
Translates to: FGHRHHRQALNP*DKDNLSWAILG
Trigger: ACCGAGTATTGCCCAGGATAGGTTATCTTTGTCCAAAGGATTTAAAGCCTGTCTGTGGTGACGATGGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS TCA 72 bp CCAGGTTGTCTAAATTTTGCATCCTCCGCTTCATTCTaGACCTGTCTGCACTGGTCCTTTGCATTATTTGAG +
Preference number: 6 (lower is better)
Translates to: PGCLNFASSASF*TCLHWSFALFE
Trigger: CTCAAATAATGCAAAGGACCAGTGCAGACAGGTTCAGAATGAAGCGGAGGATGCAAAATTTAGACAACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359874.7
CDS GCA 72 bp CACATAATGACGATATTCACTGCACAGCTCCTGAACTaGTTCTCTCTTAACTTTTTCAGCCTCGACTTTCCC +
Preference number: 6 (lower is better)
Translates to: HIMTIFTAQLLN*FSLNFFSLDFP
Trigger: GGGAAAGTCGAGGCTGAAAAAGTTAAGAGAGAAGCAGTTCAGGAGCTGTGCAGTGAATATCGTCATTATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256084.8
ENST00000359874.7
ENST00000398454.5
ENST00000507988.5
ENST00000508733.5
CDS GCA 72 bp ACAGATCCTCTTTGTCATTGCTCCTTTCTCCTGTATTaGTCCTTTCTCCTGTATTGCTCCTGTCTTCATCCT +
Preference number: 6 (lower is better)
Translates to: TDPLCHCSFLLY*SFLLYCSCLHP
Trigger: AGGATGAAGACAGGAGCAATACAGGAGAAAGGAGCAATACAGGAGAAAGGAGCAATGACAAAGAGGATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256084.8
ENST00000359874.7
ENST00000398454.5
ENST00000508733.5
CDS CCA 72 bp CAGGCTTTAAATCCTTTGGACAAAGATAACCTATCCTaGGCAATACTCGGTAGTCTTTGCACATCTCAGAAT +
Preference number: 6 (lower is better)
Translates to: QALNPLDKDNLS*AILGSLCTSQN
Trigger: ATTCTGAGATGTGCAAAGACTACCGAGTATTGCCCAGGATAGGTTATCTTTGTCCAAAGGATTTAAAGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256084.8
ENST00000359874.7
CDS TCA 72 bp GCTTCTCTTTCCAATTTTGCTTTACACATGGTACACTaGTTGTTGTACGATTTGCCATCAGCATCACGTACA +
Preference number: 6 (lower is better)
Translates to: ASLSNFALHMVH*LLYDLPSASRT
Trigger: TGTACGTGATGCTGATGGCAAATCGTACAACAATCAGTGTACCATGTGTAAAGCAAAATTGGAAAGAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256084.8
ENST00000359874.7
ENST00000398454.5
ENST00000508733.5
CDS CAA 72 bp TCAGCATTTCGTCGAATTCTAGTTTCACCCTCTCGCTaGGCATTTTCAGCTTCTTTTAAACTTGTAAAGTAT +
Preference number: 6 (lower is better)
Translates to: SAFRRILVSPSR*AFSASFKLVKY
Trigger: ATACTTTACAAGTTTAAAAGAAGCTGAAAATGCCAAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481286.5