Pregenerated sensors for SPINK1 (Homo sapiens)
Ensembl gene IDs: ENSG00000164266Ensembl transcript IDs: ENST00000296695.10, ENST00000505722.1, ENST00000510027.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATCTCTGCTTCACTCCTGTTGCACTTTATTTACACCTCATCTTCTaGCATTTGCCCCAAGTTATAAGAAGCCATCCTATACATGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: YLCFTPVALYLHLIF*HLPQVIRSHPIHAH Trigger: ATGAGCATGTATAGGATGGCTTCTTATAACTTGGGGCAAATGCCAGAAGATGAGGTGTAAATAAAGTGCAACAGGAGTGAAGCAGAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| 3UTR TCA 90 bp | GTGTTGAATCTATTTCTCTGTATCACATCACCTACTTATGGTCACTaGGGAAATGAAGCTTTACTGAAACTGGCTTTCATATCCATAAGT | + |
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Preference number: 1 (lower is better) Translates to: VLNLFLCITSPTYGH*GNEALLKLAFISIS Trigger: ACTTATGGATATGAAAGCCAGTTTCAGTAAAGCTTCATTTCCTCAGTGACCATAAGTAGGTGATGTGATACAGAGAAATAGATTCAACAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCATCCTATACATGCTCATGATGTTTTCTTAGTCATAAGCACAAGTAAGACATGGTCACTGAGGAAATaGAGCTTTACTGAAACTGGC | + |
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Preference number: 2 (lower is better) Translates to: SHPIHAHDVFLVISTSKTWSLRK*SFTETG Trigger: GCCAGTTTCAGTAAAGCTTCATTTCCTCAGTGACCA...TGTCTTACTTGTGCTTATGACTAAGAAAACATCATGAGCATGTATAGGATGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCATCCTATACATGCTCATGATGTTTTCTTAGTCATAAGCACAAGTAAGACACCTACTTATGGTCACTaGGGAAATGAAGCTTTACTG | + |
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Preference number: 2 (lower is better) Translates to: SHPIHAHDVFLVISTSKTPTYGH*GNEALL Trigger: CAGTAAAGCTTCATTTCCTCAGTGACCATAAGTAGG...TGTCTTACTTGTGCTTATGACTAAGAAAACATCATGAGCATGTATAGGATGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| 3UTR-3UTR TCA 90 bp | CCTATACATGCTCATGATGTTTTCTTAGTCATAAGCACAAGTAAGACAGGGAATGTTTCAGTTGCTGAGTaGGATAGGAAATCTGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: PIHAHDVFLVISTSKTGNVSVAE*DRKSVL Trigger: CAACACAGATTTCCTATCTCACTCAGCAACTGAAAC...ATTCCCTGTCTTACTTGTGCTTATGACTAAGAAAACATCATGAGCATGTATAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCATCCTATACATGCTCATGATGTTTTCTTAGTCATAAGCACAAGTAAGACATTGCTTTTCTCGGGGTaGGATTCATATTATCAGTAC | + |
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Preference number: 2 (lower is better) Translates to: SHPIHAHDVFLVISTSKTLLFSG*DSYYQY Trigger: GTACTGATAATATGAATCTCACCCCGAGAAAAGCAA...TGTCTTACTTGTGCTTATGACTAAGAAAACATCATGAGCATGTATAGGATGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| 3UTR CCA 72 bp | TTCACTCCTGTTGCACTTTATTTACACCTCATCTTCTaGCATTTGCCCCAAGTTATAAGAAGCCATCCTATA | + |
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Preference number: 3 (lower is better) Translates to: FTPVALYLHLIF*HLPQVIRSHPI Trigger: TATAGGATGGCTTCTTATAACTTGGGGCAAATGCCAGAAGATGAGGTGTAAATAAAGTGCAACAGGAGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| 3UTR TCA 72 bp | CTATTTCTCTGTATCACATCACCTACTTATGGTCACTaGGGAAATGAAGCTTTACTGAAACTGGCTTTCATA | + |
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Preference number: 3 (lower is better) Translates to: LFLCITSPTYGH*GNEALLKLAFI Trigger: TATGAAAGCCAGTTTCAGTAAAGCTTCATTTCCTCAGTGACCATAAGTAGGTGATGTGATACAGAGAAATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR TCA 90 bp | ACAATAAGGCCAGTCAGGCCTCGCGGTGACCTGATGGGATTTCAAAACCTTGGTGGCCTCGCGGTGACCTaGTGGGATTTCAAAACCTTG | + |
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Preference number: 4 (lower is better) Translates to: TIRPVRPRGDLMGFQNLGGLAVT*WDFKTL Trigger: CAAGGTTTTGAAATCCCATCAGGTCACCGCGAGGCC...ACCAAGGTTTTGAAATCCCATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS-3UTR TCA 90 bp | ACAATAAGGCCAGTCAGGCCTCGCGGTGACCTGATGGGATTTCAAAACCTTGGTAGTCAGGCCTCGCGGTaGCCTGATGGGATTTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: TIRPVRPRGDLMGFQNLGSQASR*PDGISK Trigger: TTTTGAAATCCCATCAGGTCACCGCGAGGCCTGACT...ACCAAGGTTTTGAAATCCCATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS-3UTR TCA 90 bp | ACAATAAGGCCAGTCAGGCCTCGCGGTGACCTGATGGGATTTCAAAACCTTGGTACAGGGCCAAGGCACTaGGAAGAAAGATGCCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: TIRPVRPRGDLMGFQNLGTGPRH*EERCLL Trigger: TAACAGGCATCTTTCTTCTCAGTGCCTTGGCCCTGT...ACCAAGGTTTTGAAATCCCATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS-3UTR CCA 90 bp | ACAATAAGGCCAGTCAGGCCTCGCGGTGACCTGATGGGATTTCAAAACCTTGGTTGCCTGTTACCTTCATaGCTGAAGTTCTGCGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TIRPVRPRGDLMGFQNLGCLLPS*LKFCVQ Trigger: CTGGACGCAGAACTTCAGCCATGAAGGTAACAGGCA...ACCAAGGTTTTGAAATCCCATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS-3UTR TCA 90 bp | TATTCAACAATAAGGCCAGTCAGGCCTCGCGGTGACCTGATGGGATTTCAAAACCGTCCAGAGGTCAGTTaGAAACTGCACCGCACTTAC | + |
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Preference number: 4 (lower is better) Translates to: YSTIRPVRPRGDLMGFQNRPEVS*KLHRTY Trigger: GTAAGTGCGGTGCAGTTTTCAACTGACCTCTGGACG...GTTTTGAAATCCCATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGTTGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS-3UTR GCA 90 bp | ACAATAAGGCCAGTCAGGCCTCGCGGTGACCTGATGGGATTTCAAAACCTTGGTTCATGGCTGAAGTTCTaGGTCCAGAGGTCAGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: TIRPVRPRGDLMGFQNLGSWLKF*VQRSVE Trigger: TTCAACTGACCTCTGGACGCAGAACTTCAGCCATGA...ACCAAGGTTTTGAAATCCCATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS-3UTR TCA 90 bp | TCAACAATAAGGCCAGTCAGGCCTCGCGGTGACCTGATGGGATTTCAAAACCTTCAAGGCCCAGATTTTTaGATGAGGATAGAAGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: STIRPVRPRGDLMGFQNLQGPDF*MRIEVW Trigger: CCAGACTTCTATCCTCATTCAAAAATCTGGGCCTTG...AAGGTTTTGAAATCCCATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS-3UTR TCA 90 bp | CCTATACATGCTCATGATGTTTTCTTAGTCATAAGCACAAGTAAGACAGGGAATCAGGCTGGTCTCAGGTaGTCCACCTGCATCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PIHAHDVFLVISTSKTGNQAGLR*STCIGL Trigger: GAGGCCGATGCAGGTGGATCACCTGAGACCAGCCTG...ATTCCCTGTCTTACTTGTGCTTATGACTAAGAAAACATCATGAGCATGTATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR CCA 90 bp | AGCCATCCTATACATGCTCATGATGTTTTCTTAGTCATAAGCACAAGTAAGACAAGGCGCCCGCCACCATaGGGTTTCACCATGTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: SHPIHAHDVFLVISTSKTRRPPP*GFTMLA Trigger: GGCCAACATGGTGAAACCCCATGGTGGCGGGCGCCT...TGTCTTACTTGTGCTTATGACTAAGAAAACATCATGAGCATGTATAGGATGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR GCA 90 bp | ATTTATTCAACAATAAGGCCAGTCAGGCCTCGCGGTGACCTGATGGGATTTCAAAGGTCAGTTGAAAACTaGACCGCACTTACCACGTCT | + |
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Preference number: 4 (lower is better) Translates to: IYSTIRPVRPRGDLMGFQRSVEN*TALTTS Trigger: AGACGTGGTAAGTGCGGTGCAGTTTTCAACTGACCT...TTGAAATCCCATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGTTGAATAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS-3UTR CCA 90 bp | TATTCAACAATAAGGCCAGTCAGGCCTCGCGGTGACCTGATGGGATTTCAAAACGTTCATTGTAACATTTaGCCTCTCTTCCCAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: YSTIRPVRPRGDLMGFQNVHCNI*PLFPGS Trigger: ACTCCCTGGGAAGAGAGGCCAAATGTTACAATGAAC...GTTTTGAAATCCCATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGTTGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS-3UTR CCA 90 bp | ATTTATTCAACAATAAGGCCAGTCAGGCCTCGCGGTGACCTGATGGGATTTCAAGGGATTTCAAAACCTTaGTTCTCAGCAAGGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: IYSTIRPVRPRGDLMGFQGISKP*FSARPR Trigger: TCTGGGCCTTGCTGAGAACCAAGGTTTTGAAATCCC...TTGAAATCCCATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGTTGAATAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS-3UTR GCA 90 bp | ATCTATTTCTCTGTATCACATCACCTACTTATGGTCACTGAGGAAATGAAGCTTACAGGAGTGAGCCACTaGACCCGGCTGGCATTCTAT | + |
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Preference number: 4 (lower is better) Translates to: IYFSVSHHLLMVTEEMKLTGVSH*TRLAFY Trigger: ATAGAATGCCAGCCGGGTGCAGTGGCTCACTCCTGT...AAGCTTCATTTCCTCAGTGACCATAAGTAGGTGATGTGATACAGAGAAATAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR CCA 90 bp | AGCCATCCTATACATGCTCATGATGTTTTCTTAGTCATAAGCACAAGTAAGACAAGCCTCCTGAGTAGCTaGTATTATAGGCGCCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: SHPIHAHDVFLVISTSKTSLLSS*YYRRPP Trigger: TGGCGGGCGCCTATAATACCAGCTACTCAGGAGGCT...TGTCTTACTTGTGCTTATGACTAAGAAAACATCATGAGCATGTATAGGATGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR TCA 90 bp | ATCTATTTCTCTGTATCACATCACCTACTTATGGTCACTGAGGAAATGAAGCTTCGTCCAGAGGTCAGTTaGAAACTGCACCGCACTTAC | + |
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Preference number: 4 (lower is better) Translates to: IYFSVSHHLLMVTEEMKLRPEVS*KLHRTY Trigger: GTAAGTGCGGTGCAGTTTTCAACTGACCTCTGGACG...AAGCTTCATTTCCTCAGTGACCATAAGTAGGTGATGTGATACAGAGAAATAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR TCA 90 bp | ATCTATTTCTCTGTATCACATCACCTACTTATGGTCACTGAGGAAATGAAGCTTTCTGCCTCAGCCTCCTaGGTAGCTGGTATTATAGGC | + |
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Preference number: 4 (lower is better) Translates to: IYFSVSHHLLMVTEEMKLSASAS*VAGIIG Trigger: GCCTATAATACCAGCTACTCAGGAGGCTGAGGCAGA...AAGCTTCATTTCCTCAGTGACCATAAGTAGGTGATGTGATACAGAGAAATAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR TCA 90 bp | CCTATACATGCTCATGATGTTTTCTTAGTCATAAGCACAAGTAAGACAGGGAATACAGGGCCAAGGCACTaGGAAGAAAGATGCCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: PIHAHDVFLVISTSKTGNTGPRH*EERCLL Trigger: TAACAGGCATCTTTCTTCTCAGTGCCTTGGCCCTGT...ATTCCCTGTCTTACTTGTGCTTATGACTAAGAAAACATCATGAGCATGTATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR CCA 90 bp | CCTATACATGCTCATGATGTTTTCTTAGTCATAAGCACAAGTAAGACAGGGAATTGCCTGTTACCTTCATaGCTGAAGTTCTGCGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PIHAHDVFLVISTSKTGNCLLPS*LKFCVQ Trigger: CTGGACGCAGAACTTCAGCCATGAAGGTAACAGGCA...ATTCCCTGTCTTACTTGTGCTTATGACTAAGAAAACATCATGAGCATGTATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR CCA 90 bp | ATTTATTCAACAATAAGGCCAGTCAGGCCTCGCGGTGACCTGATGGGATTTCAAATGAGGATAGAAGTCTaGCGTTTCCGATTTTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: IYSTIRPVRPRGDLMGFQMRIEV*RFRFSK Trigger: TTTTGAAAATCGGAAACGCCAGACTTCTATCCTCAT...TTGAAATCCCATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGTTGAATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS-3UTR CCA 90 bp | ATCTATTTCTCTGTATCACATCACCTACTTATGGTCACTGAGGAAATGAAGCTTGCCACTGCACCCGGCTaGCATTCTATTCTTTTCATG | + |
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Preference number: 4 (lower is better) Translates to: IYFSVSHHLLMVTEEMKLATAPG*HSILFM Trigger: CATGAAAAGAATAGAATGCCAGCCGGGTGCAGTGGC...AAGCTTCATTTCCTCAGTGACCATAAGTAGGTGATGTGATACAGAGAAATAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR GCA 90 bp | CCTATACATGCTCATGATGTTTTCTTAGTCATAAGCACAAGTAAGACAGGGAATAGGTCAGTTGAAAACTaGACCGCACTTACCACGTCT | + |
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Preference number: 4 (lower is better) Translates to: PIHAHDVFLVISTSKTGNRSVEN*TALTTS Trigger: AGACGTGGTAAGTGCGGTGCAGTTTTCAACTGACCT...ATTCCCTGTCTTACTTGTGCTTATGACTAAGAAAACATCATGAGCATGTATAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR GCA 90 bp | CCTATACATGCTCATGATGTTTTCTTAGTCATAAGCACAAGTAAGACAGGGAATTCATGGCTGAAGTTCTaGGTCCAGAGGTCAGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: PIHAHDVFLVISTSKTGNSWLKF*VQRSVE Trigger: TTCAACTGACCTCTGGACGCAGAACTTCAGCCATGA...ATTCCCTGTCTTACTTGTGCTTATGACTAAGAAAACATCATGAGCATGTATAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR TCA 90 bp | ATCTATTTCTCTGTATCACATCACCTACTTATGGTCACTGAGGAAATGAAGCTTTGGTCACTGAGGAAATaGAGCTTTACTGAAACTGGC | + |
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Preference number: 4 (lower is better) Translates to: IYFSVSHHLLMVTEEMKLWSLRK*SFTETG Trigger: GCCAGTTTCAGTAAAGCTTCATTTCCTCAGTGACCA...AAGCTTCATTTCCTCAGTGACCATAAGTAGGTGATGTGATACAGAGAAATAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR CCA 90 bp | ATCTATTTCTCTGTATCACATCACCTACTTATGGTCACTGAGGAAATGAAGCTTGTTCATTGTAACATTTaGCCTCTCTTCCCAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: IYFSVSHHLLMVTEEMKLVHCNI*PLFPGS Trigger: ACTCCCTGGGAAGAGAGGCCAAATGTTACAATGAAC...AAGCTTCATTTCCTCAGTGACCATAAGTAGGTGATGTGATACAGAGAAATAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR TCA 90 bp | CCTATACATGCTCATGATGTTTTCTTAGTCATAAGCACAAGTAAGACAGGGAATCCTACTTATGGTCACTaGGGAAATGAAGCTTTACTG | + |
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Preference number: 4 (lower is better) Translates to: PIHAHDVFLVISTSKTGNPTYGH*GNEALL Trigger: CAGTAAAGCTTCATTTCCTCAGTGACCATAAGTAGG...ATTCCCTGTCTTACTTGTGCTTATGACTAAGAAAACATCATGAGCATGTATAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR TCA 90 bp | ATCTATTTCTCTGTATCACATCACCTACTTATGGTCACTGAGGAAATGAAGCTTGTTTCAGTTGCTGAGTaGGATAGGAAATCTGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: IYFSVSHHLLMVTEEMKLVSVAE*DRKSVL Trigger: CAACACAGATTTCCTATCTCACTCAGCAACTGAAAC...AAGCTTCATTTCCTCAGTGACCATAAGTAGGTGATGTGATACAGAGAAATAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR TCA 90 bp | ATCTATTTCTCTGTATCACATCACCTACTTATGGTCACTGAGGAAATGAAGCTTCAGGGAATATTAGCATaGTGCTTGAGACATGCTAAG | + |
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Preference number: 4 (lower is better) Translates to: IYFSVSHHLLMVTEEMKLQGILA*CLRHAK Trigger: CTTAGCATGTCTCAAGCATCATGCTAATATTCCCTG...AAGCTTCATTTCCTCAGTGACCATAAGTAGGTGATGTGATACAGAGAAATAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR TCA 90 bp | ATCTATTTCTCTGTATCACATCACCTACTTATGGTCACTGAGGAAATGAAGCTTTTGCTTTTCTCGGGGTaGGATTCATATTATCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: IYFSVSHHLLMVTEEMKLLLFSG*DSYYQY Trigger: GTACTGATAATATGAATCTCACCCCGAGAAAAGCAA...AAGCTTCATTTCCTCAGTGACCATAAGTAGGTGATGTGATACAGAGAAATAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR GCA 90 bp | CCTATACATGCTCATGATGTTTTCTTAGTCATAAGCACAAGTAAGACAGGGAATCTGCTTCACTCCTGTTaGACTTTATTTACACCTCAT | + |
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Preference number: 4 (lower is better) Translates to: PIHAHDVFLVISTSKTGNLLHSC*TLFTPH Trigger: ATGAGGTGTAAATAAAGTGCAACAGGAGTGAAGCAG...ATTCCCTGTCTTACTTGTGCTTATGACTAAGAAAACATCATGAGCATGTATAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR CCA 90 bp | CCTATACATGCTCATGATGTTTTCTTAGTCATAAGCACAAGTAAGACAGGGAATTTACACCTCATCTTCTaGCATTTGCCCCAAGTTATA | + |
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Preference number: 4 (lower is better) Translates to: PIHAHDVFLVISTSKTGNLHLIF*HLPQVI Trigger: TATAACTTGGGGCAAATGCCAGAAGATGAGGTGTAA...ATTCCCTGTCTTACTTGTGCTTATGACTAAGAAAACATCATGAGCATGTATAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR CCA 90 bp | ATCTATTTCTCTGTATCACATCACCTACTTATGGTCACTGAGGAAATGAAGCTTATTCTATTCTTTTCATaGATCCTTTCTTGGCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: IYFSVSHHLLMVTEEMKLILFFS*ILSWPL Trigger: AAGGGGCCAAGAAAGGATCCATGAAAAGAATAGAAT...AAGCTTCATTTCCTCAGTGACCATAAGTAGGTGATGTGATACAGAGAAATAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR GCA 90 bp | AGCCATCCTATACATGCTCATGATGTTTTCTTAGTCATAAGCACAAGTAAGACAAAAAATATGTATCTCTaGTTCACTCCTGTTGCACTT | + |
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Preference number: 4 (lower is better) Translates to: SHPIHAHDVFLVISTSKTKNMYL*FTPVAL Trigger: AAGTGCAACAGGAGTGAAGCAGAGATACATATTTTT...TGTCTTACTTGTGCTTATGACTAAGAAAACATCATGAGCATGTATAGGATGGCT 36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS TCA 90 bp | ATGCCTGTTACCTTCATGGCTGAAGTTCTGCGTCCAGAGGTCAGTTaGAAACTGCACCGCACTTACCACGTCTCTTCAGAAGCCTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: MPVTFMAEVLRPEVS*KLHRTYHVSSEAWD Trigger: GTCCCAGGCTTCTGAAGAGACGTGGTAAGTGCGGTGCAGTTTTCAACTGACCTCTGGACGCAGAACTTCAGCCATGAAGGTAACAGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS GCA 90 bp | TTACCTTCATGGCTGAAGTTCTGCGTCCAGAGGTCAGTTGAAAACTaGACCGCACTTACCACGTCTCTTCAGAAGCCTGGGACTGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: LPSWLKFCVQRSVEN*TALTTSLQKPGTGR Trigger: CCTTCCAGTCCCAGGCTTCTGAAGAGACGTGGTAAGTGCGGTGCAGTTTTCAACTGACCTCTGGACGCAGAACTTCAGCCATGAAGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS-3UTR CAA 90 bp | ACAATAAGGCCAGTCAGGCCTCGCGGTGACCTGATGGGATTTCAAAACCTTGGTTGGGATTTCAAAACCTaGGTTCTCAGCAAGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: TIRPVRPRGDLMGFQNLGWDFKT*VLSKAQ Trigger: CTGGGCCTTGCTGAGAACCAAGGTTTTGAAATCCCA...ACCAAGGTTTTGAAATCCCATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS TCA 90 bp | AGTCAGCTCCAGTGTTACCAGATAGACTCAACAGGGCCAAGGCACTaGGAAGAAAGATGCCTGTTACCTTCATGGCTGAAGTTCTGCGTC | + |
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Preference number: 5 (lower is better) Translates to: SQLQCYQIDSTGPRH*EERCLLPSWLKFCV Trigger: GACGCAGAACTTCAGCCATGAAGGTAACAGGCATCTTTCTTCTCAGTGCCTTGGCCCTGTTGAGTCTATCTGGTAACACTGGAGCTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296695.10 ENST00000510027.2 |
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| CDS-3UTR CAA 90 bp | TATTCAACAATAAGGCCAGTCAGGCCTCGCGGTGACCTGATGGGATTTCAAAACGCGTCCAGAGGTCAGTaGAAAACTGCACCGCACTTA | + |
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Preference number: 5 (lower is better) Translates to: YSTIRPVRPRGDLMGFQNASRGQ*KTAPHL Trigger: TAAGTGCGGTGCAGTTTTCAACTGACCTCTGGACGC...GTTTTGAAATCCCATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGTTGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS TCA 90 bp | ATTCAGATACATTTATTCAACAATAAGGCCAGTCAGGCCTCGCGGTaGCCTGATGGGATTTCAAAACCTTGGTTCTCAGCAAGGCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: IQIHLFNNKASQASR*PDGISKPWFSARPR Trigger: TCTGGGCCTTGCTGAGAACCAAGGTTTTGAAATCCCATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGTTGAATAAATGTATCTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296695.10 ENST00000505722.1 |
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| CDS-3UTR CAA 90 bp | TCAACAATAAGGCCAGTCAGGCCTCGCGGTGACCTGATGGGATTTCAAAACCTTACAGGGTCATATATCTaGGTGCATCCATTAAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: STIRPVRPRGDLMGFQNLTGSYI*VHPLSS Trigger: TGAACTTAATGGATGCACCAAGATATATGACCCTGT...AAGGTTTTGAAATCCCATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS-3UTR CAA 90 bp | AGCCATCCTATACATGCTCATGATGTTTTCTTAGTCATAAGCACAAGTAAGACAGCGTCCAGAGGTCAGTaGAAAACTGCACCGCACTTA | + |
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Preference number: 5 (lower is better) Translates to: SHPIHAHDVFLVISTSKTASRGQ*KTAPHL Trigger: TAAGTGCGGTGCAGTTTTCAACTGACCTCTGGACGC...TGTCTTACTTGTGCTTATGACTAAGAAAACATCATGAGCATGTATAGGATGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR CAA 90 bp | ATCTATTTCTCTGTATCACATCACCTACTTATGGTCACTGAGGAAATGAAGCTTCTCATCTTCTGGCATTaGCCCCAAGTTATAAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: IYFSVSHHLLMVTEEMKLLIFWH*PQVIRS Trigger: GCTTCTTATAACTTGGGGCAAATGCCAGAAGATGAG...AAGCTTCATTTCCTCAGTGACCATAAGTAGGTGATGTGATACAGAGAAATAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS CCA 90 bp | CTCAAGTTTGTACTCACCGATTTTCAAAACATAACACGCATTCATTaGGATAAGTATTTCCATCAGTCCCACAGACAGGGTCATATATCT | + |
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Preference number: 5 (lower is better) Translates to: LKFVLTDFQNITRIH*DKYFHQSHRQGHIS Trigger: AGATATATGACCCTGTCTGTGGGACTGATGGAAATACTTATCCCAATGAATGCGTGTTATGTTTTGAAAATCGGTGAGTACAAACTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR CAA 90 bp | ATCTATTTCTCTGTATCACATCACCTACTTATGGTCACTGAGGAAATGAAGCTTTCTGCTTCACTCCTGTaGCACTTTATTTACACCTCA | + |
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Preference number: 5 (lower is better) Translates to: IYFSVSHHLLMVTEEMKLSASLL*HFIYTS Trigger: TGAGGTGTAAATAAAGTGCAACAGGAGTGAAGCAGA...AAGCTTCATTTCCTCAGTGACCATAAGTAGGTGATGTGATACAGAGAAATAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR CAA 90 bp | ATCTATTTCTCTGTATCACATCACCTACTTATGGTCACTGAGGAAATGAAGCTTACAGGGTCATATATCTaGGTGCATCCATTAAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: IYFSVSHHLLMVTEEMKLTGSYI*VHPLSS Trigger: TGAACTTAATGGATGCACCAAGATATATGACCCTGT...AAGCTTCATTTCCTCAGTGACCATAAGTAGGTGATGTGATACAGAGAAATAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS-3UTR CAA 90 bp | ATCTATTTCTCTGTATCACATCACCTACTTATGGTCACTGAGGAAATGAAGCTTATGCTAAGGTTTCAGTaGCTGAGTGAGATAGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: IYFSVSHHLLMVTEEMKLMLRFQ*LSEIGN Trigger: ATTTCCTATCTCACTCAGCAACTGAAACCTTAGCAT...AAGCTTCATTTCCTCAGTGACCATAAGTAGGTGATGTGATACAGAGAAATAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510027.2 |
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| CDS GCA 72 bp | TGGCTGAAGTTCTGCGTCCAGAGGTCAGTTGAAAACTaGACCGCACTTACCACGTCTCTTCAGAAGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: WLKFCVQRSVEN*TALTTSLQKPG Trigger: CCCAGGCTTCTGAAGAGACGTGGTAAGTGCGGTGCAGTTTTCAACTGACCTCTGGACGCAGAACTTCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS TCA 72 bp | ACCTTCATGGCTGAAGTTCTGCGTCCAGAGGTCAGTTaGAAACTGCACCGCACTTACCACGTCTCTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: TFMAEVLRPEVS*KLHRTYHVSSE Trigger: TTCTGAAGAGACGTGGTAAGTGCGGTGCAGTTTTCAACTGACCTCTGGACGCAGAACTTCAGCCATGAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296695.10 |
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| CDS TCA 72 bp | CAGTGTTACCAGATAGACTCAACAGGGCCAAGGCACTaGGAAGAAAGATGCCTGTTACCTTCATGGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: QCYQIDSTGPRH*EERCLLPSWLK Trigger: CTTCAGCCATGAAGGTAACAGGCATCTTTCTTCTCAGTGCCTTGGCCCTGTTGAGTCTATCTGGTAACACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296695.10 ENST00000510027.2 |
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| CDS GCA 72 bp | GAAGAAAGATGCCTGTTACCTTCATGGCTGAAGTTCTaGGTCCAGAGGTCAGTTGAAAACTGCACCGCACTT | + |
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Preference number: 6 (lower is better) Translates to: EERCLLPSWLKF*VQRSVENCTAL Trigger: AAGTGCGGTGCAGTTTTCAACTGACCTCTGGACGCAGAACTTCAGCCATGAAGGTAACAGGCATCTTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296695.10 ENST00000510027.2 |
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| CDS TCA 72 bp | CATTTATTCAACAATAAGGCCAGTCAGGCCTCGCGGTaGCCTGATGGGATTTCAAAACCTTGGTTCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: HLFNNKASQASR*PDGISKPWFSA Trigger: TGCTGAGAACCAAGGTTTTGAAATCCCATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGTTGAATAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296695.10 ENST00000505722.1 |
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