RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPICE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163611

Ensembl transcript IDs: ENST00000295872.8, ENST00000460832.1, ENST00000467618.1, ENST00000480527.1, ENST00000495812.5, ENST00000496105.1, ENST00000496859.1

Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTAATTTGTCCAAAGTACACAGCTCAAGTGGCAGAAATGGCATTTaGGGCAAGATTTCTGGTTTCAGTACTTGCATCCTTAGCTACTGT +
Preference number: 1 (lower is better)
Translates to: INLSKVHSSSGRNGI*GKISGFSTCILSYC
Trigger: ACAGTAGCTAAGGATGCAAGTACTGAAACCAGAAATCTTGCCTCAAATGCCATTTCTGCCACTTGAGCTGTGTACTTTGGACAAATTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR TCA 90 bp AGCATTTACATACCTCTAACTGATAGGTCTACTATGAGATTCAAATaGGATAATGGTGATACCACAGCTTATAGTACGGTGTCTGCCACA +
Preference number: 1 (lower is better)
Translates to: SIYIPLTDRSTMRFK*DNGDTTAYSTVSAT
Trigger: TGTGGCAGACACCGTACTATAAGCTGTGGTATCACCATTATCTCATTTGAATCTCATAGTAGACCTATCAGTTAGAGGTATGTAAATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR CCA 90 bp CTGTGGATGTTGTTATCAATCCAGTATCTCTGCCAACCTGTAATTTaGAAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTC +
Preference number: 1 (lower is better)
Translates to: LWMLLSIQYLCQPVI*KTVNFRLSKLLAAF
Trigger: GAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGATTGATAACAACATCCACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR TCA 90 bp ATATGCCCAGCATGTTTTCTTTCAATCTCTAGACATCTTTTCAGGTaGAATACCTCTAAATTTCAAGCACTGTGTGCAATTGTTAATCTG +
Preference number: 1 (lower is better)
Translates to: ICPACFLSISRHLFR*NTSKFQALCAIVNL
Trigger: CAGATTAACAATTGCACACAGTGCTTGAAATTTAGAGGTATTTCACCTGAAAAGATGTCTAGAGATTGAAAGAAAACATGCTGGGCATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR-3UTR TCA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGAGGTAAGAGGATTGCTTaGACCCAGGAGACTGAGGTG +
Preference number: 2 (lower is better)
Translates to: FELFTQVENSYHRAREQRGKRIA*TQETEV
Trigger: CACCTCAGTCTCCTGGGTTCAAGCAATCCTCTTACC...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR-3UTR TCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGTTGAACCCAGGAGACTaGGGTGGCAGTGAACCAGAT +
Preference number: 2 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKLNPGD*GGSEPD
Trigger: ATCTGGTTCACTGCCACCTCAGTCTCCTGGGTTCAA...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR-3UTR CCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAAATTAGCTGGGCGTGGTaGCATGAACCTATAATCCTA +
Preference number: 2 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKISWAW*HEPIIL
Trigger: TAGGATTATAGGTTCATGCCACCACGCCCAGCTAAT...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR CAA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTaGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGGAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: QYLCQPVIWKTVNFR*SKLLAAFWGILEKS
Trigger: TGACTTCTCCAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR-3UTR CCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGCAAATTAGCTGGGCGTaGTGGCATGAACCTATAATC +
Preference number: 2 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKQISWA*WHEPII
Trigger: GATTATAGGTTCATGCCACCACGCCCAGCTAATTTG...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR-3UTR CCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGAATACACAAATTAGCTaGGCGTGGTGGCATGAACCT +
Preference number: 2 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKNTQIS*AWWHEP
Trigger: AGGTTCATGCCACCACGCCCAGCTAATTTGTGTATT...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR-3UTR TCA 90 bp ATCCAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCGGTGTTACATATTCCTaGAAGCCAGACTCTAATCAC +
Preference number: 2 (lower is better)
Translates to: IQYLCQPVIWKTVNFRLSGVTYS*KPDSNH
Trigger: GTGATTAGAGTCTGGCTTTCAGGAATATGTAACACC...GCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR CAA 90 bp ATGAGTCTAAACACAAGTAATCTCAGTTTGAATTGTTCACTCAGGTaGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAA +
Preference number: 2 (lower is better)
Translates to: MSLNTSNLSLNCSLR*RIPIIEPGSRDHSK
Trigger: TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAACTGAGATTACTTGTGTTTAGACTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR CAA 90 bp ACTGTGGATGTTGTTATCAATCCAGTATCTCTGCCAACCTGTAATTaGGAAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTT +
Preference number: 2 (lower is better)
Translates to: TVDVVINPVSLPTCN*ENCKFQVEQVISSF
Trigger: AAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGATTGATAACAACATCCACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR-3UTR GCA 90 bp ATCCAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCGCAACCACTCTTACCTaGTTAAGCAAATATAAACAA +
Preference number: 2 (lower is better)
Translates to: IQYLCQPVIWKTVNFRLSATTLT*LSKYKQ
Trigger: TTGTTTATATTTGCTTAAGCAGGTAAGAGTGGTTGC...GCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR-3UTR CAA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGTGTAATCCCGGCACTTaGGGAAACCAAGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILCNPGT*GNQGRW
Trigger: CCACCTGCCTTGGTTTCCCAAAGTGCCGGGATTACA...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR TCA 72 bp TCCAAAGTACACAGCTCAAGTGGCAGAAATGGCATTTaGGGCAAGATTTCTGGTTTCAGTACTTGCATCCTT +
Preference number: 3 (lower is better)
Translates to: SKVHSSSGRNGI*GKISGFSTCIL
Trigger: AAGGATGCAAGTACTGAAACCAGAAATCTTGCCTCAAATGCCATTTCTGCCACTTGAGCTGTGTACTTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR-3UTR CAA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGGGAGCTGTAGGTCAGTaGGTTGTTGAAAACTTATTT +
Preference number: 3 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILGAVGQ*VVENLF
Trigger: AAATAAGTTTTCAACAACCAACTGACCTACAGCTCC...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR-3UTR CAA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGACACTCCCAGGCCTATaGTTTTTAAGGCTGTATATT +
Preference number: 3 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKTLPGL*FLRLYI
Trigger: AATATACAGCCTTAAAAACAATAGGCCTGGGAGTGT...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR-3UTR CAA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGACAAGTAATCTCAGTTaGAATTGTTCACTCAGGTTG +
Preference number: 3 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILTSNLS*NCSLRL
Trigger: CAACCTGAGTGAACAATTCAAACTGAGATTACTTGT...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR TCA 72 bp ATACCTCTAACTGATAGGTCTACTATGAGATTCAAATaGGATAATGGTGATACCACAGCTTATAGTACGGTG +
Preference number: 3 (lower is better)
Translates to: IPLTDRSTMRFK*DNGDTTAYSTV
Trigger: CACCGTACTATAAGCTGTGGTATCACCATTATCTCATTTGAATCTCATAGTAGACCTATCAGTTAGAGGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR CCA 72 bp GTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTaGGGCATACTGGAGAAGTCATATGTTATCAAAATA +
Preference number: 3 (lower is better)
Translates to: VNFRLSKLLAAF*GILEKSYVIKI
Trigger: TATTTTGATAACATATGACTTCTCCAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR TCA 72 bp GCATGTTTTCTTTCAATCTCTAGACATCTTTTCAGGTaGAATACCTCTAAATTTCAAGCACTGTGTGCAATT +
Preference number: 3 (lower is better)
Translates to: ACFLSISRHLFR*NTSKFQALCAI
Trigger: AATTGCACACAGTGCTTGAAATTTAGAGGTATTTCACCTGAAAAGATGTCTAGAGATTGAAAGAAAACATGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAACCCCAACCGGGCGCCTaGATCCCAGGCAACAGACAG +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKPQPGA*IPGNRQ
Trigger: CTGTCTGTTGCCTGGGATCCAGGCGCCCGGTTGGGG...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAAGTCCCTAAGGCTCGTTaGGACTGCGAGCTGCAAGCC +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKVPKAR*DCELQA
Trigger: GGCTTGCAGCTCGCAGTCCCAACGAGCCTTAGGGAC...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGTGCTCTGCAGACCCTTaGCCTCGCGACCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: KFHSQGAVGQLVVENLFECSADP*PRDLST
Trigger: GGTGGACAGGTCGCGAGGTCAAGGGTCTGCAGAGCA...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGAGGAGGGTCTGGCACCTaGGACAGTTTAACGGGCAAC +
Preference number: 4 (lower is better)
Translates to: FELFTQVENSYHRAREQRGGSGT*DSLTGN
Trigger: GTTGCCCGTTAAACTGTCTCAGGTGCCAGACCCTCC...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGCGCGGCTGCGCTTCCTaGAGTAAGGATTCCCCAACC +
Preference number: 4 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKRGCAS*SKDSPT
Trigger: GGTTGGGGAATCCTTACTTCAGGAAGCGCAGCCGCG...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGCATCTCAACCTGCCTTaGAGTCGGTCCCGACTGCCG +
Preference number: 4 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILHLNLP*SRSRLP
Trigger: CGGCAGTCGGGACCGACTGCAAGGCAGGTTGAGATG...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAACGGAGTCCATCCCCTTaGTCTCCTCTGGGCTCAATA +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKRSPSP*SPLGSI
Trigger: TATTGAGCCCAGAGGAGAGCAAGGGGATGGACTCCG...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGAGTAATCCCGGCACTTTaGGAAACCAAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: FELFTQVENSYHRAREQRVIPAL*ETKAGG
Trigger: TCCACCTGCCTTGGTTTCCCAAAGTGCCGGGATTAC...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGACCACAATGGGACCCTaGGAGGAATCAGGAGCCACT +
Preference number: 4 (lower is better)
Translates to: KFHSQGAVGQLVVENLFETTMGP*EESGAT
Trigger: AGTGGCTCCTGATTCCTCTCAGGGTCCCATTGTGGT...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATGGGTGATAGGGTCTTaGTTTACCACAATGGGACCC +
Preference number: 4 (lower is better)
Translates to: FELFTQVENSYHRAREQRWVIGS*FTTMGP
Trigger: GGGTCCCATTGTGGTAAATCAAGACCCTATCACCCA...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGAAGCCTGTAAGACCCTaGCTGCTCTGCAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: KFHSQGAVGQLVVENLFEKPVRP*LLCRPL
Trigger: CAAGGGTCTGCAGAGCAGTCAGGGTCTTACAGGCTT...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAAGTGACCATGTACTGCTaGAGTCTTGCCTGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKVTMYC*SLACVA
Trigger: TGCTACACAGGCAAGACTTCAGCAGTACATGGTCAC...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAAGGAGCAGGACGAGTTTaGACAGTCCTTCTCAATACG +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKGAGRV*TVLLNT
Trigger: CGTATTGAGAAGGACTGTTCAAACTCGTCCTGCTCC...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCCAGGCAACAGACAGATaGCACCACCGTTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSQATDR*HHRSPH
Trigger: GTGGGGAGAACGGTGGTGGCATCTGTCTGTTGCCTG...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAAGCTTTCTGGGGCTTCTaGTCCTGGAATAGATACCTC +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKAFWGF*SWNRYL
Trigger: GAGGTATCTATTCCAGGAGCAGAAGCCCCAGAAAGC...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCTCGGGAGTTGCCCGATaGACGGTTAGATCAGTCACG +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSSGVAR*TVRSVT
Trigger: CGTGACTGATCTAACCGTTCATCGGGCAACTCCCGA...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAATGTGGCTCCGCTTTCTaGTGCCTGAATTTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKCGSAF*CLNFLS
Trigger: AGACAAGAAATTCAGGCATCAGAAAGCGGAGCCACA...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGACTCTCCATCTCTGAGTaGAGAGACGATTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: FELFTQVENSYHRAREQRLSISE*RDDSLH
Trigger: GTGAAGAGAATCGTCTCTTCACTCAGAGATGGAGAG...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAAGACAGTACTACATTTTaGGCTTTCTGGGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKDSTTF*AFWGFC
Trigger: GCAGAAGCCCCAGAAAGCTCAAAATGTAGTACTGTC...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp ATCCAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCTTGAACCCAGGAGACTaGGGTGGCAGTGAACCAGAT +
Preference number: 4 (lower is better)
Translates to: IQYLCQPVIWKTVNFRLSLNPGD*GGSEPD
Trigger: ATCTGGTTCACTGCCACCTCAGTCTCCTGGGTTCAA...GCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGGGTAAGAGGATTGCTTaGACCCAGGAGACTGAGGTG +
Preference number: 4 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILGKRIA*TQETEV
Trigger: CACCTCAGTCTCCTGGGTTCAAGCAATCCTCTTACC...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGGGCAGGTGGATCATTTaGGGTCAGGAGTTCGAGATC +
Preference number: 4 (lower is better)
Translates to: KFHSQGAVGQLVVENLFEGRWII*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAAATGATCCACCTGCC...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGGTTGGGACTGCGAGCTaGAAGCCTCAGATCCATCAT +
Preference number: 4 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKVGTAS*KPQIHH
Trigger: ATGATGGATCTGAGGCTTGCAGCTCGCAGTCCCAAC...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCAAGGCTCGTTGGGACTaGGAGCTGCAAGCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSKARWD*ELQASD
Trigger: ATCTGAGGCTTGCAGCTCGCAGTCCCAACGAGCCTT...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGTTTGTTCTCAGCTGCTaGCCATCTCCCAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILFVLSC*PSPSTG
Trigger: CCCAGTACTGGGAGATGGGCAGCAGCTGAGAACAAA...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAATCATTTGTTCTCAGCTaGTGCCCATCTCCCAGTACT +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKSFVLS*CPSPST
Trigger: AGTACTGGGAGATGGGCAGCAGCTGAGAACAAATGA...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAAGTTATCTGGAGGGTCTaGCACCTGAGACAGTTTAAC +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKVIWRV*HLRQFN
Trigger: GTTAAACTGTCTCAGGTGCCAGACCCTCCAGATAAC...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAAGCTCTTCTGAGAATGTaGGGCTTCTTGACTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKALLRM*GFLTVE
Trigger: CTCAACAGTCAAGAAGCCCCACATTCTCAGAAGAGC...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAATCCCACTTCCTGAGGTaGCATTTAGTGGAGAACAAG +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKSHFLR*HLVENK
Trigger: CTTGTTCTCCACTAAATGCCACCTCAGGAAGTGGGA...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGGTAGATTCTTCAGGCTaGAGCCTGGTTTGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: KFHSQGAVGQLVVENLFEVDSSG*SLVWSL
Trigger: GAGACTCCAAACCAGGCTTCAGCCTGAAGAATCTAC...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGCTGTTTTTGCTTCCTTaGGTTCAGCACGTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKLFLLP*VQHVSH
Trigger: GTGGGACACGTGCTGAACTCAAGGAAGCAAAAACAG...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGGCTCTGAGAGGTAACTaGACAGGTGACATTGGTGGA +
Preference number: 4 (lower is better)
Translates to: KFHSQGAVGQLVVENLFEALRGN*TGDIGG
Trigger: TCCACCAATGTCACCTGTTCAGTTACCTCTCAGAGC...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGCTTCAGTCCATGCTCTaGGAGGTAACTGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKLQSML*EVTEQV
Trigger: CACCTGTTCAGTTACCTCTCAGAGCATGGACTGAAG...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGCATTTGGAAACCCTGTaGGCCTACGAGGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILHLETL*AYEETA
Trigger: AGCTGTTTCCTCGTAGGCGCACAGGGTTTCCAAATG...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGAGCCACTGTTACATTTaGAAACCCTGTGCGCCTACG +
Preference number: 4 (lower is better)
Translates to: KFHSQGAVGQLVVENLFESHCYI*KPCAPT
Trigger: CGTAGGCGCACAGGGTTTCCAAATGTAACAGTGGCT...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATACAACTGGACGCTCTaGACTGTCCATAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: FELFTQVENSYHRAREQRYNWTL*TVHNSS
Trigger: AGAAGAGTTATGGACAGTCCAGAGCGTCCAGTTGTA...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp ATCCAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAGTTGGAGGAAGTCGTaGAGCAGGACGAGTTTGAAC +
Preference number: 4 (lower is better)
Translates to: IQYLCQPVIWKTVNFRLSSWRKS*SRTSLN
Trigger: GTTCAAACTCGTCCTGCTCCACGACTTCCTCCAACT...GCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATGGGGCTTCTGCTCCTaGAATAGATACCTCAATTGT +
Preference number: 4 (lower is better)
Translates to: FELFTQVENSYHRAREQRWGFCS*NRYLNC
Trigger: ACAATTGAGGTATCTATTCCAGGAGCAGAAGCCCCA...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGAATTAGCTGGGCGTGGTaGCATGAACCTATAATCCTA +
Preference number: 4 (lower is better)
Translates to: FELFTQVENSYHRAREQRISWAW*HEPIIL
Trigger: TAGGATTATAGGTTCATGCCACCACGCCCAGCTAAT...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGCACAGCGGTTCACTCTaGCAAATGACATTTGCACTC +
Preference number: 4 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKHSGSL*QMTFAL
Trigger: GAGTGCAAATGTCATTTGTCAGAGTGAACCGCTGTG...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAAATTCTCACTTTCTCCTaGCTGGCTATTAACAGTTCC +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKILTFS*LAINSS
Trigger: GGAACTGTTAATAGCCAGTCAGGAGAAAGTGAGAAT...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAATGGAGGAGTTATTTGTaGCTGGGTTGCTATTTTCTG +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKWRSYL*LGCYFL
Trigger: CAGAAAATAGCAACCCAGTCACAAATAACTCCTCCA...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGCTGTCAGAGCATCAATaGGCTCTCGATGATCACCTA +
Preference number: 4 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKLSEHQ*ALDDHL
Trigger: TAGGTGATCATCGAGAGCTCATTGATGCTCTGACAG...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGGTTGCTCATCTGTTGTaGCCATGTACTGCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKVAHLL*PCTAEV
Trigger: GACTTCAGCAGTACATGGTCACAACAGATGAGCAAC...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCCAGCCACTTCCTCTCTaGACATCAATGGCACTGAGA +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSQPLPL*TSMALR
Trigger: TCTCAGTGCCATTGATGTTCAGAGAGGAAGTGGCTG...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCATTGCAGAGGGGCTGTaGGAGGTTAACAAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSIAEGL*EVNKRS
Trigger: GCTCCTTTTGTTAACCTCTCACAGCCCCTCTGCAAT...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp ATCCAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCGAATGTGGGGCTTCTTaGCTGTTGAGTGTTGGAATG +
Preference number: 4 (lower is better)
Translates to: IQYLCQPVIWKTVNFRLSECGAS*LLSVGM
Trigger: CATTCCAACACTCAACAGTCAAGAAGCCCCACATTC...GCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGTTGTATTTATCCCGCTaGCGGGAGAGACAGTACTAC +
Preference number: 4 (lower is better)
Translates to: KFHSQGAVGQLVVENLFELYLSR*RERQYY
Trigger: GTAGTACTGTCTCTCCCGTCAGCGGGATAAATACAA...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGTTCAGAGCAGCTCTTTaGTCCCCTGATGAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILFRAAL*SPDERA
Trigger: TGCTCTTTCATCAGGGGAGCAAAGAGCTGCTCTGAA...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAAGGCTTGGAAAGAGCATaGAAATTCGGTTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKGLERA*KFGFLF
Trigger: GAAAAGGAAACCGAATTTGCATGCTCTTTCCAAGCC...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp ATCCAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCGTACTGCTGAAGTCTTaGCTGTGTAGCAGCGTTTTC +
Preference number: 4 (lower is better)
Translates to: IQYLCQPVIWKTVNFRLSVLLKS*LCSSVF
Trigger: GAAAACGCTGCTACACAGGCAAGACTTCAGCAGTAC...GCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATTTAAGTTGCTCTTCTaGCTGGGTGGTGTTAACAAC +
Preference number: 4 (lower is better)
Translates to: FELFTQVENSYHRAREQRFKLLF*LGGVNN
Trigger: GTTGTTAACACCACCCAGGCAGAAGAGCAACTTAAA...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGTGCTGCTCTATCAACTaGAGTAGTTTTCCACGAGCC +
Preference number: 4 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKCCSIN*SSFPRA
Trigger: GGCTCGTGGAAAACTACTGCAGTTGATAGAGCAGCA...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGACCAACAAGTTTCTGCTaGTCTATCAACTGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: FELFTQVENSYHRAREQRPTSFC*SINCSS
Trigger: ACTACTGCAGTTGATAGAGCAGCAGAAACTTGTTGG...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGAGTTGCTCTTCTGCCTaGGTGGTGTTAACAACACAG +
Preference number: 4 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILSCSSA*VVLTTQ
Trigger: CTGTGTTGTTAACACCACCCAGGCAGAAGAGCAACT...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGGATTTGTGTATTTCATaGCGGCGTACCAGATCTTCG +
Preference number: 4 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKDLCIS*RRTRSS
Trigger: CGAAGATCTGGTACGCCGTCATGAAATACACAAATC...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAAGTATTCGTGTTAGACTaGGAGTTTAGAGAGTTATCC +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKVFVLD*EFRELS
Trigger: GGATAACTCTCTAAACTCTCAGTCTAACACGAATAC...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCGAGACTCTCCATCTCTaGGTGAAGAGACGATTCTCT +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSETLHL*VKRRFS
Trigger: AGAGAATCGTCTCTTCACTCAGAGATGGAGAGTCTC...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCAGACTGAGGTGGCAGTaGACCAGATTATACAACTGC +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSRLRWQ*TRLYNC
Trigger: GCAGTTGTATAATCTGGTTCACTGCCACCTCAGTCT...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGCTCAATTGTCCTCTTTaGTCCTTCAGTCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKLNCPL*SFSPCS
Trigger: AGAGCATGGACTGAAGGAGCAAAGAGGACAATTGAG...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp ATCCAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCCTTGATTTACCACAATaGGACCCTGAGAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: IQYLCQPVIWKTVNFRLSLDLPQ*DPERNQ
Trigger: CTGATTCCTCTCAGGGTCCCATTGTGGTAAATCAAG...GCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGAACTTCTTTACGTAGCTaGATCTCACTCTCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: FELFTQVENSYHRAREQRTSLRS*ISLSLR
Trigger: CCTTAAAGAGAGTGAGATCCAGCTACGTAAAGAAGT...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGATGGCACTGAGACATTaGCATTTACAACTGGACGCT +
Preference number: 4 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKMALRH*HLQLDA
Trigger: AGCGTCCAGTTGTAAATGCCAATGTCTCAGTGCCAT...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCCAGATTCATGTTATCTaGAGGGTCTGGCACCTGAGA +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSQIHVI*RVWHLR
Trigger: TCTCAGGTGCCAGACCCTCCAGATAACATGAATCTG...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGTTGACTGTTGAGTGTTaGAATGGGAATTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILLTVEC*NGNCRG
Trigger: CCCTCTGCAATTCCCATTCCAACACTCAACAGTCAA...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp ATCCAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAATACACAAATTAGCTaGGCGTGGTGGCATGAACCT +
Preference number: 4 (lower is better)
Translates to: IQYLCQPVIWKTVNFRLSNTQIS*AWWHEP
Trigger: AGGTTCATGCCACCACGCCCAGCTAATTTGTGTATT...GCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGAGTACACAGCTCAAGTaGCAGAAATGGCATTTGAGG +
Preference number: 4 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKSTQLK*QKWHLR
Trigger: CCTCAAATGCCATTTCTGCCACTTGAGCTGTGTACT...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp ATCCAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCCATGTATCATGTGTTTaGGGACATCCAGGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: IQYLCQPVIWKTVNFRLSHVSCV*GHPGWN
Trigger: ATTCCAACCTGGATGTCCTCAAACACATGATACATG...GCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGGAACATCAATGGCACTaGGACATTGGCATTTACAAC +
Preference number: 4 (lower is better)
Translates to: KFHSQGAVGQLVVENLFEEHQWH*DIGIYN
Trigger: GTTGTAAATGCCAATGTCTCAGTGCCATTGATGTTC...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGAACGATTCTCTTCACTTaGATTCTGAATGTCTGTATC +
Preference number: 4 (lower is better)
Translates to: FELFTQVENSYHRAREQRTILFT*ILNVCI
Trigger: GATACAGACATTCAGAATTCAAGTGAAGAGAATCGT...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGAGGAAGACATTATGTCTaGCTTTCAAATGGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: FELFTQVENSYHRAREQRGRHYV*LSNGKD
Trigger: ATCTTTCCCATTTGAAAGTCAGACATAATGTCTTCC...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGAACTTGTTCCAGTTGTTaGCTTGTCTCTACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: FELFTQVENSYHRAREQRTCSSC*LVSTSL
Trigger: TAAAGAAGTAGAGACAAGGCAACAACTGGAACAAGT...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGGTGAGTGATATCAGTTaGTCATCTGTTGTGACCATG +
Preference number: 4 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILVSDIS*SSVVTM
Trigger: CATGGTCACAACAGATGAGCAACTGATATCACTCAC...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCGAGAGAATTTTAAGTTaGTCTTCTGCCTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSERILS*SSAWVV
Trigger: CACCACCCAGGCAGAAGAGCAACTTAAAATTCTCTC...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAACTGTTTCTCAATCTTTaGTCTTGGATTAAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKLFLNL*SWIKRC
Trigger: ACACCTCTTAATCCAAGAGCAAAGATTGAGAAACAG...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCAATTATTTCCACAGTTaGAGGAAGTCGTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSNYFHS*RKSWSR
Trigger: CCTGCTCCACGACTTCCTCCAACTGTGGAAATAATT...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCCAAATTAGCTGGGCGTaGTGGCATGAACCTATAATC +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSQISWA*WHEPII
Trigger: GATTATAGGTTCATGCCACCACGCCCAGCTAATTTG...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCGCACAGCATAGGCTTTaGAGAAAGACTGCCTATGTT +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSAQHRL*RKTAYV
Trigger: AACATAGGCAGTCTTTCTCCAAAGCCTATGCTGTGC...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR CAA 72 bp AACACAAGTAATCTCAGTTTGAATTGTTCACTCAGGTaGAGAATTCCTATCATAGAGCCAGGGAGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: NTSNLSLNCSLR*RIPIIEPGSRD
Trigger: ATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAACTGAGATTACTTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR CAA 72 bp TGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTaGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTG +
Preference number: 4 (lower is better)
Translates to: CQPVIWKTVNFR*SKLLAAFWGIL
Trigger: CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCACATCATTAAGAGCCTaGGGTTCTATGACAGACTCA +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSTSLRA*GSMTDS
Trigger: TGAGTCTGTCATAGAACCTCAGGCTCTTAATGATGT...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGGTTGCTATTTTCTGCTaGATGTCAGTCCACAACTTA +
Preference number: 4 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKVAIFC*MSVHNL
Trigger: TAAGTTGTGGACTGACATTCAGCAGAAAATAGCAAC...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCTCAATGAGCTCTCGATaGTCACCTAATACTTGTTCC +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSSMSSR*SPNTCS
Trigger: GGAACAAGTATTAGGTGATCATCGAGAGCTCATTGA...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGCTTCTCAATACGTCCTaGAGAGGAGAGAATTTTAAG +
Preference number: 4 (lower is better)
Translates to: KFHSQGAVGQLVVENLFELLNTS*RGENFK
Trigger: CTTAAAATTCTCTCCTCTTCAGGACGTATTGAGAAG...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGATGTGCCTTGATAGCTaGATTCTGCAATGTCAAATC +
Preference number: 4 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILMCLDS*ILQCQI
Trigger: GATTTGACATTGCAGAATTCAGCTATCAAGGCACAT...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGTTTAACAGCTGTTTTTaGTTCCTTGAGTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILFNSCF*FLEFST
Trigger: CGTGCTGAACTCAAGGAAGCAAAAACAGCTGTTAAA...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp ATCCAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAGTCTGCAGAGGTTGTaGTACCTGATGATATGTTTT +
Preference number: 4 (lower is better)
Translates to: IQYLCQPVIWKTVNFRLSSLQRL*YLMICF
Trigger: AAAACATATCATCAGGTAGCACAACCTCTGCAGACT...GCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAAAGAAGTCATGTCACTTaGACTTTCTTGTTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKRSHVT*TFLFVQ
Trigger: TTGAACAAACAAGAAAGTGCAAGTGACATGACTTCT...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGAAACCAACAAGTTTCTaGTGCTCTATCAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: KFHSQGAVGQLVVENLFEKPTSF*CSINCS
Trigger: ACTGCAGTTGATAGAGCAGCAGAAACTTGTTGGTTT...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGTCACTTTCTCCTGACTaGCTATTAACAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILSLSPD*LLTVPS
Trigger: AGAAGGAACTGTTAATAGCCAGTCAGGAGAAAGTGA...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGCTTTCTGGGGCATACTaGAGAAGTCATATGTTATCA +
Preference number: 4 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILLSGAY*RSHMLS
Trigger: TGATAACATATGACTTCTCCAGTATGCCCCAGAAAG...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAATGCCAACCTGTAATTTaGAAAACTGTAAATTTCAGG +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKCQPVI*KTVNFR
Trigger: CCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCA...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAAATGAAGCACATAAAGTaGCTACAATATTGCCTAGTA +
Preference number: 4 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKMKHIK*LQYCLV
Trigger: TACTAGGCAATATTGTAGCCACTTTATGTGCTTCAT...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGTTGAGGCAAGATTTCTaGTTTCAGTACTTGCATCCT +
Preference number: 4 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKLRQDF*FQYLHP
Trigger: AGGATGCAAGTACTGAAACCAGAAATCTTGCCTCAA...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCTCTTGCATCTGGTATTaGTCAGAAAGAATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSSCIWY*SERISF
Trigger: GAAGGAGATTCTTTCTGATCAATACCAGATGCAAGA...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR TCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCCCGCTTTCTGATGCCTaGATTTCTTGTCTGTTATTT +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSPLSDA*ISCLLF
Trigger: AAATAACAGACAAGAAATTCAGGCATCAGAAAGCGG...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCCTGACAAATGACATTTaGACTCTCAAAACACAGAGC +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSLTNDI*TLKTQS
Trigger: GCTCTGTGTTTTGAGAGTGCAAATGTCATTTGTCAG...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGTCTTCTGTTAGTTGTTaGAGAAACCTGTCTGTATTC +
Preference number: 4 (lower is better)
Translates to: KFHSQGAVGQLVVENLFESSVSC*RNLSVF
Trigger: GAATACAGACAGGTTTCTCCAACAACTAACAGAAGA...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCTGTTTTTCTTCGGCTTaGAAAGAGCATGCAAATTCG +
Preference number: 4 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSCFSSA*KEHANS
Trigger: CGAATTTGCATGCTCTTTCCAAGCCGAAGAAAAACA...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGCTCAATCTTTGCTCTTaGATTAAGAGGTGTGAATCT +
Preference number: 4 (lower is better)
Translates to: KFHSQGAVGQLVVENLFELNLCS*IKRCES
Trigger: AGATTCACACCTCTTAATCCAAGAGCAAAGATTGAG...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGTTCACTTATGATACATaGGTAGAAAGAGCAAACCAG +
Preference number: 4 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILFTYDT*VERANQ
Trigger: CTGGTTTGCTCTTTCTACCCATGTATCATAAGTGAA...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR GCA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGGCAACCACTCTTACCTaGTTAAGCAAATATAAACAA +
Preference number: 4 (lower is better)
Translates to: KFHSQGAVGQLVVENLFEATTLT*LSKYKQ
Trigger: TTGTTTATATTTGCTTAAGCAGGTAAGAGTGGTTGC...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CCA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGCTCAAAAATATGTGCTaGAAAATTCTTGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKLKNMC*KILGQI
Trigger: AATCTGGCCAAGAATTTTCCAGCACATATTTTTGAG...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295872.8
3UTR CAA 72 bp GTTGTTATCAATCCAGTATCTCTGCCAACCTGTAATTaGGAAAACTGTAAATTTCAGGTTGAGCAAGTTATT +
Preference number: 4 (lower is better)
Translates to: VVINPVSLPTCN*ENCKFQVEQVI
Trigger: AATAACTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGATTGATAACAAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS CCA 90 bp GCCGCGGCTGCGCTTCCTGAAGTAAGGATTCCCCAACCGGGCGCCTaGATCCCAGGCAACAGACAGATGCCACCACCGTTCTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: AAAALPEVRIPQPGA*IPGNRQMPPPFSPP
Trigger: GGGTGGGGAGAACGGTGGTGGCATCTGTCTGTTGCCTGGGATCCAGGCGCCCGGTTGGGGAATCCTTACTTCAGGAAGCGCAGCCGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS GCA 90 bp CTGTGCAAAAGCTCCCGAAAGCGGTGCGCACGCGCATACTCGAGGTaGTCTGGCGCCACGCACAAACATACCCAGACACGCACCCTGACA +
Preference number: 5 (lower is better)
Translates to: LCKSSRKRCARAYSR*SGATHKHTQTRTLT
Trigger: TGTCAGGGTGCGTGTCTGGGTATGTTTGTGCGTGGCGCCAGAGCACCTCGAGTATGCGCGTGCGCACCGCTTTCGGGAGCTTTTGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496859.1
CDS CCA 90 bp CAAAAGCTCCCGAAAGCGGTGCGCACGCGCATACTCGAGGTGCTCTaGCGCCACGCACAAACATACCCAGACACGCACCCTGACACGTAC +
Preference number: 5 (lower is better)
Translates to: QKLPKAVRTRILEVL*RHAQTYPDTHPDTY
Trigger: GTACGTGTCAGGGTGCGTGTCTGGGTATGTTTGTGCGTGGCGCCAGAGCACCTCGAGTATGCGCGTGCGCACCGCTTTCGGGAGCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496859.1
CDS GCA 90 bp GAGCACCCCCAATTACCAGCTCTGTGCAAAAGCTCCCGAAAGCGGTaGGCACGCGCATACTCGAGGTGCTCTGGCGCCACGCACAAACAT +
Preference number: 5 (lower is better)
Translates to: EHPQLPALCKSSRKR*ARAYSRCSGATHKH
Trigger: ATGTTTGTGCGTGGCGCCAGAGCACCTCGAGTATGCGCGTGCGCACCGCTTTCGGGAGCTTTTGCACAGAGCTGGTAATTGGGGGTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496859.1
CDS TCA 90 bp AATGACATTTGCACTCTCAAAACACAGAGCCGCGGCTGCGCTTCCTaGAGTAAGGATTCCCCAACCGGGCGCCTGGATCCCAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: NDICTLKTQSRGCAS*SKDSPTGRLDPRQQ
Trigger: CTGTTGCCTGGGATCCAGGCGCCCGGTTGGGGAATCCTTACTTCAGGAAGCGCAGCCGCGGCTCTGTGTTTTGAGAGTGCAAATGTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS TCA 90 bp GGTCCCAAAGCACCCTGGATAGTTTGCCTCTCTCCTGCTACACGGTaGACTCCCCCAACGCTACAATCGAGCACCCCCAATTACCAGCTC +
Preference number: 5 (lower is better)
Translates to: GPKAPWIVCLSPATR*TPPTLQSSTPNYQL
Trigger: GAGCTGGTAATTGGGGGTGCTCGATTGTAGCGTTGGGGGAGTTCACCGTGTAGCAGGAGAGAGGCAAACTATCCAGGGTGCTTTGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000460832.1
ENST00000496859.1
CDS CCA 90 bp TCAGCTGCTGCCCATCTCCCAGTACTGGGAGCTCTTCTGAGAATGTaGGGCTTCTTGACTGTTGAGTGTTGGAATGGGAATTGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: SAAAHLPVLGALLRM*GFLTVECWNGNCRG
Trigger: CCCTCTGCAATTCCCATTCCAACACTCAACAGTCAAGAAGCCCCACATTCTCAGAAGAGCTCCCAGTACTGGGAGATGGGCAGCAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS TCA 90 bp CTTTCTTACACCAACTCGGGGACCACAGCGGTTCACTCTGACAAATaGCATAGGAGGAGCCTTCTGAGAAGCCCCTCTGACATCCATCGA +
Preference number: 5 (lower is better)
Translates to: LSYTNSGTTAVHSDK*HRRSLLRSPSDIHR
Trigger: TCGATGGATGTCAGAGGGGCTTCTCAGAAGGCTCCTCCTATGTCATTTGTCAGAGTGAACCGCTGTGGTCCCCGAGTTGGTGTAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460832.1
CDS TCA 90 bp GGGTTAACTTCCACGGACTCCTCAAAACTCACAGGAGGAGCCTTCTaGGAAGCCCCTCTGACATCCATCGATTTAAATGACGCTCCCGGT +
Preference number: 5 (lower is better)
Translates to: GLTSTDSSKLTGGAF*EAPLTSIDLNDAPG
Trigger: ACCGGGAGCGTCATTTAAATCGATGGATGTCAGAGGGGCTTCTCAGAAGGCTCCTCCTGTGAGTTTTGAGGAGTCCGTGGAAGTTAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496859.1
CDS TCA 90 bp CCCAGTACTGGGAGCTCTTCTGAGAATGTGGGGCTTCTTGACTGTTaGGTGTTGGAATGGGAATTGCAGAGGGGCTGTGAGAGGTTAACA +
Preference number: 5 (lower is better)
Translates to: PSTGSSSENVGLLDC*VLEWELQRGCERLT
Trigger: TGTTAACCTCTCACAGCCCCTCTGCAATTCCCATTCCAACACTCAACAGTCAAGAAGCCCCACATTCTCAGAAGAGCTCCCAGTACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS TCA 90 bp GGAAAATTCTTGGCCAGATTCATGTTATCTGGAGGGTCTGGCACCTaGGACAGTTTAACGGGCAACTCTTCCTGTGGGAATTCAGCCACT +
Preference number: 5 (lower is better)
Translates to: GKFLARFMLSGGSGT*DSLTGNSSCGNSAT
Trigger: AGTGGCTGAATTCCCACAGGAAGAGTTGCCCGTTAAACTGTCTCAGGTGCCAGACCCTCCAGATAACATGAATCTGGCCAAGAATTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS-3UTR CAA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGCTGCTCTGCAGACCCTaGACCTCGCGACCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILLLCRP*TSRPVH
Trigger: GTGGACAGGTCGCGAGGTCAAGGGTCTGCAGAGCAG...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS TCA 90 bp TTCCTGTGGGAATTCAGCCACTTCCTCTCTGAACATCAATGGCACTaGGACATTGGCATTTACAACTGGACGCTCTGGACTGTCCATAAC +
Preference number: 5 (lower is better)
Translates to: FLWEFSHFLSEHQWH*DIGIYNWTLWTVHN
Trigger: GTTATGGACAGTCCAGAGCGTCCAGTTGTAAATGCCAATGTCTCAGTGCCATTGATGTTCAGAGAGGAAGTGGCTGAATTCCCACAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CCA 90 bp ATGTGCTGGAAAATTCTTGGCCAGATTCATGTTATCTGGAGGGTCTaGCACCTGAGACAGTTTAACGGGCAACTCTTCCTGTGGGAATTC +
Preference number: 5 (lower is better)
Translates to: MCWKILGQIHVIWRV*HLRQFNGQLFLWEF
Trigger: GAATTCCCACAGGAAGAGTTGCCCGTTAAACTGTCTCAGGTGCCAGACCCTCCAGATAACATGAATCTGGCCAAGAATTTTCCAGCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS-3UTR CAA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGTCATCTCAACCTGCCTaGCAGTCGGTCCCGACTGCC +
Preference number: 5 (lower is better)
Translates to: KFHSQGAVGQLVVENLFESSQPA*QSVPTA
Trigger: GGCAGTCGGGACCGACTGCAAGGCAGGTTGAGATGA...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGGTTCTCCCCACCCTTTaGGTAGCCCTGGTCCCTAAG +
Preference number: 5 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKVLPTL*VALVPK
Trigger: CTTAGGGACCAGGGCTACCAAAAGGGTGGGGAGAAC...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGAGAGCCACTGTTACATTaGGAAACCCTGTGCGCCTAC +
Preference number: 5 (lower is better)
Translates to: FELFTQVENSYHRAREQREPLLH*ETLCAY
Trigger: GTAGGCGCACAGGGTTTCCAAATGTAACAGTGGCTC...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGAGCTGAGGTAAGAGGATaGCTTGAACCCAGGAGACTG +
Preference number: 5 (lower is better)
Translates to: FELFTQVENSYHRAREQRAEVRG*LEPRRL
Trigger: CAGTCTCCTGGGTTCAAGCAATCCTCTTACCTCAGC...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS GCA 90 bp GTCATTATGTCCTTTCTTTGTATTAATGACTCATTTGTTCTCAGCTaGTGCCCATCTCCCAGTACTGGGAGCTCTTCTGAGAATGTGGGG +
Preference number: 5 (lower is better)
Translates to: VIMSFLCINDSFVLS*CPSPSTGSSSENVG
Trigger: CCCCACATTCTCAGAAGAGCTCCCAGTACTGGGAGATGGGCAGCAGCTGAGAACAAATGAGTCATTAATACAAAGAAAGGACATAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS-3UTR CAA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAACCTCAATTGTCCTCTTaGCTCCTTCAGTCCATGCTC +
Preference number: 5 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKPQLSS*LLQSML
Trigger: GAGCATGGACTGAAGGAGCAAAGAGGACAATTGAGG...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS TCA 90 bp TCTTCTTGTATTTATCCCGCTGACGGGAGAGACAGTACTACATTTTaGGCTTTCTGGGGCTTCTGCTCCTGGAATAGATACCTCAATTGT +
Preference number: 5 (lower is better)
Translates to: SSCIYPADGRDSTTF*AFWGFCSWNRYLNC
Trigger: ACAATTGAGGTATCTATTCCAGGAGCAGAAGCCCCAGAAAGCTCAAAATGTAGTACTGTCTCTCCCGTCAGCGGGATAAATACAAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000467618.1
CDS GCA 90 bp ATTATGTCCTTTCTTTGTATTAATGACTCATTTGTTCTCAGCTGCTaGCCATCTCCCAGTACTGGGAGCTCTTCTGAGAATGTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: IMSFLCINDSFVLSC*PSPSTGSSSENVGL
Trigger: AAGCCCCACATTCTCAGAAGAGCTCCCAGTACTGGGAGATGGGCAGCAGCTGAGAACAAATGAGTCATTAATACAAAGAAAGGACATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CCA 90 bp CCAATTTTGTTCCTTCTCAATTATTTCCACAGTTGGAGGAAGTCGTaGAGCAGGACGAGTTTGAACAGTCCTTCTCAATACGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: PILFLLNYFHSWRKS*SRTSLNSPSQYVLK
Trigger: CTTCAGGACGTATTGAGAAGGACTGTTCAAACTCGTCCTGCTCCACGACTTCCTCCAACTGTGGAAATAATTGAGAAGGAACAAAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CCA 90 bp GGTCTTCTCTTCCCAATTTTGTTCCTTCTCAATTATTTCCACAGTTaGAGGAAGTCGTGGAGCAGGACGAGTTTGAACAGTCCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: GLLFPILFLLNYFHS*RKSWSRTSLNSPSQ
Trigger: TTGAGAAGGACTGTTCAAACTCGTCCTGCTCCACGACTTCCTCCAACTGTGGAAATAATTGAGAAGGAACAAAATTGGGAAGAGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS-3UTR CAA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGCCAGATCTTCGGGAGTaGCCCGATGAACGGTTAGAT +
Preference number: 5 (lower is better)
Translates to: KFHSQGAVGQLVVENLFEPDLRE*PDERLD
Trigger: ATCTAACCGTTCATCGGGCAACTCCCGAAGATCTGG...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGAAGTCTCTTGACAGCATaGGTAGCATTCAGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: FELFTQVENSYHRAREQRSLLTA*VAFRAA
Trigger: AGCTGCTCTGAATGCTACCAATGCTGTCAAGAGACT...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGACTGGTTTGGAGTCTCTaGACAGCATTGGTAGCATTC +
Preference number: 5 (lower is better)
Translates to: FELFTQVENSYHRAREQRLVWSL*TALVAF
Trigger: GAATGCTACCAATGCTGTCAAGAGACTCCAAACCAG...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGAAATGGCACTGAGACATaGGCATTTACAACTGGACGC +
Preference number: 5 (lower is better)
Translates to: FELFTQVENSYHRAREQRNGTET*AFTTGR
Trigger: GCGTCCAGTTGTAAATGCCAATGTCTCAGTGCCATT...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAAGGAGAGAATTTTAAGTaGCTCTTCTGCCTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKGENFK*LFCLGG
Trigger: ACCACCCAGGCAGAAGAGCAACTTAAAATTCTCTCC...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAACAATTATTTCCACAGTaGGAGGAAGTCGTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKQLFPQ*EEVVEQ
Trigger: CTGCTCCACGACTTCCTCCAACTGTGGAAATAATTG...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCTGTAATCCCGGCACTTaGGGAAACCAAGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSCNPGT*GNQGRW
Trigger: CCACCTGCCTTGGTTTCCCAAAGTGCCGGGATTACA...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS TCA 90 bp TCAATTGTCCTCTTTGCTCCTTCAGTCCATGCTCTGAGAGGTAACTaGACAGGTGACATTGGTGGAGAAAGATTCAAACCAACAAGTTTC +
Preference number: 5 (lower is better)
Translates to: SIVLFAPSVHALRGN*TGDIGGERFKPTSF
Trigger: GAAACTTGTTGGTTTGAATCTTTCTCCACCAATGTCACCTGTTCAGTTACCTCTCAGAGCATGGACTGAAGGAGCAAAGAGGACAATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS GCA 90 bp TCACTTGCACTTTCTTGTTTGTTCAACTCCCGGAGTCCATCCCCTTaGTCTCCTCTGGGCTCAATAATATTATTCATATGTGCCTTGATA +
Preference number: 5 (lower is better)
Translates to: SLALSCLFNSRSPSP*SPLGSIILFICALI
Trigger: TATCAAGGCACATATGAATAATATTATTGAGCCCAGAGGAGAGCAAGGGGATGGACTCCGGGAGTTGAACAAACAAGAAAGTGCAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS GCA 90 bp ACAGGTGACATTGGTGGAGAAAGATTCAAACCAACAAGTTTCTGCTaGTCTATCAACTGCAGTAGTTTTCCACGAGCCTCCATACTTTGT +
Preference number: 5 (lower is better)
Translates to: TGDIGGERFKPTSFC*SINCSSFPRASILC
Trigger: ACAAAGTATGGAGGCTCGTGGAAAACTACTGCAGTTGATAGAGCAGCAGAAACTTGTTGGTTTGAATCTTTCTCCACCAATGTCACCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS-3UTR CAA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGAGGCTGAAGCCTGGTTaGGAGTCTCTTGACAGCATT +
Preference number: 5 (lower is better)
Translates to: KFHSQGAVGQLVVENLFERLKPG*ESLDSI
Trigger: AATGCTGTCAAGAGACTCCAAACCAGGCTTCAGCCT...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGGCTGTTTTTGCTTCCTaGAGTTCAGCACGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILAVFAS*SSARVP
Trigger: TGGGACACGTGCTGAACTCAAGGAAGCAAAAACAGC...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp TCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGATCATTCAAAAAGAATGTGGGGCTTCTaGACTGTTGAGTGTTGGAAT +
Preference number: 5 (lower is better)
Translates to: SLRLRIPIIEPGSRDHSKRMWGF*TVECWN
Trigger: ATTCCAACACTCAACAGTCAAGAAGCCCCACATTCT...TTTTGAATGATCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS TCA 90 bp CTAAGACGAAGAATTTCAGCTGTCAGAGCATCAATGAGCTCTCGATaGTCACCTAATACTTGTTCCAGTTGTTGCCTTGTCTCTACTTCT +
Preference number: 5 (lower is better)
Translates to: LRRRISAVRASMSSR*SPNTCSSCCLVSTS
Trigger: AGAAGTAGAGACAAGGCAACAACTGGAACAAGTATTAGGTGATCATCGAGAGCTCATTGATGCTCTGACAGCTGAAATTCTTCGTCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS TCA 90 bp GGACTGTCCATAACTCTTCTACCTGTGGCTCCGCTTTCTGATGCCTaGATTTCTTGTCTGTTATTTATCACAGGACAGTTCTTAATAGCA +
Preference number: 5 (lower is better)
Translates to: GLSITLLPVAPLSDA*ISCLLFITGQFLIA
Trigger: TGCTATTAAGAACTGTCCTGTGATAAATAACAGACAAGAAATTCAGGCATCAGAAAGCGGAGCCACAGGTAGAAGAGTTATGGACAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS-3UTR CAA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGCTTGCACTTTCTTGTTaGTTCAACTCCCGGAGTCCA +
Preference number: 5 (lower is better)
Translates to: KFHSQGAVGQLVVENLFELALSC*FNSRSP
Trigger: TGGACTCCGGGAGTTGAACAAACAAGAAAGTGCAAG...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp ATCCAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCGTCACTTGCACTTTCTaGTTTGTTCAACTCCCGGAG +
Preference number: 5 (lower is better)
Translates to: IQYLCQPVIWKTVNFRLSVTCTF*FVQLPE
Trigger: CTCCGGGAGTTGAACAAACAAGAAAGTGCAAGTGAC...GCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp TTTGAATTGTTCACTCAGGTTGAGAATTCCTATCATAGAGCCAGGGAGCAGAGAAAAGAGCTTCAAGTCTaGGCTTTACCTCTTACAAGC +
Preference number: 5 (lower is better)
Translates to: FELFTQVENSYHRAREQRKELQV*ALPLTS
Trigger: GCTTGTAAGAGGTAAAGCCAAGACTTGAAGCTCTTT...TCTCTGCTCCCTGGCTCTATGATAGGAATTCTCAACCTGAGTGAACAATTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS TCA 90 bp TGTTCTCCAAATCTTCTCCCATGTGAGAGACTCTCCATCTCTGAGTaGAGAGACGATTCTCTTCACTTGAATTCTGAATGTCTGTATCAA +
Preference number: 5 (lower is better)
Translates to: CSPNLLPCERLSISE*RDDSLHLNSECLYQ
Trigger: TTGATACAGACATTCAGAATTCAAGTGAAGAGAATCGTCTCTTCACTCAGAGATGGAGAGTCTCTCACATGGGAGAAGATTTGGAGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS-3UTR CAA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCTTGGGTGATAGGGTCTaGATTTACCACAATGGGACC +
Preference number: 5 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSLGDRV*IYHNGT
Trigger: GGTCCCATTGTGGTAAATCAAGACCCTATCACCCAA...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGGTAAGTCTGCAGAGGTaGTGCTACCTGATGATATGT +
Preference number: 5 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKVSLQR*CYLMIC
Trigger: ACATATCATCAGGTAGCACAACCTCTGCAGACTTAC...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCTGGAGCAGGACGAGTTaGAACAGTCCTTCTCAATAC +
Preference number: 5 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSWSRTS*NSPSQY
Trigger: GTATTGAGAAGGACTGTTCAAACTCGTCCTGCTCCA...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGAGACAGTACTACATTTaGAGCTTTCTGGGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILRQYYI*SFLGLL
Trigger: CAGAAGCCCCAGAAAGCTCAAAATGTAGTACTGTCT...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS TCA 90 bp GGCGTTCCTGGAGGAGTTATTTGTGACTGGGTTGCTATTTTCTGCTaGATGTCAGTCCACAACTTACTAATTAACTCAAAATTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: GVPGGVICDWVAIFC*MSVHNLLINSKFSS
Trigger: AGAAGAGAATTTTGAGTTAATTAGTAAGTTGTGGACTGACATTCAGCAGAAAATAGCAACCCAGTCACAAATAACTCCTCCAGGAACGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295872.8
ENST00000467618.1
ENST00000496105.1
CDS TCA 90 bp AATCAGGAGATCTGCCTTCTAATCCCATTTCTGTCACTTATCCTGTaGGTTAGGGCTATTTCTTTCTGTGCAAAATTGAAGGCACCAAAA +
Preference number: 5 (lower is better)
Translates to: NQEICLLIPFLSLIL*VRAISFCAKLKAPK
Trigger: TTTTGGTGCCTTCAATTTTGCACAGAAAGAAATAGCCCTAACTCACAGGATAAGTGACAGAAATGGGATTAGAAGGCAGATCTCCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496105.1
CDS GCA 90 bp TTAGCACTAACTGATATTATCCCAAATATTGATTTGTTTGTTGCCTaGTCCCCTACTCAAATGCTAGAGTATTCAAGCCCACACATGGCA +
Preference number: 5 (lower is better)
Translates to: LALTDIIPNIDLFVA*SPTQMLEYSSPHMA
Trigger: TGCCATGTGTGGGCTTGAATACTCTAGCATTTGAGTAGGGGAGCAGGCAACAAACAAATCAATATTTGGGATAATATCAGTTAGTGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496105.1
CDS-3UTR CAA 90 bp ATCCAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCTCATGTATCATGTGTTaGAGGACATCCAGGTTGGAA +
Preference number: 5 (lower is better)
Translates to: IQYLCQPVIWKTVNFRLSSCIMC*RTSRLE
Trigger: TTCCAACCTGGATGTCCTCAAACACATGATACATGA...GCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGGTATTAATGACTCATTaGTTCTCAGCTGCTGCCCAT +
Preference number: 5 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILVLMTH*FSAAAH
Trigger: ATGGGCAGCAGCTGAGAACAAATGAGTCATTAATAC...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGCCTAGTTGTGTGACCTaGAGAAAATACCTCCTTGTA +
Preference number: 5 (lower is better)
Translates to: KFHSQGAVGQLVVENLFEPSCVT*RKYLLV
Trigger: TACAAGGAGGTATTTTCTCAAGGTCACACAACTAGG...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp ATCCAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCTGGCAGAAATGGCATTaGAGGCAAGATTTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: IQYLCQPVIWKTVNFRLSWQKWH*RQDFWF
Trigger: AAACCAGAAATCTTGCCTCAAATGCCATTTCTGCCA...GCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS CCA 90 bp AGTCTGCAGAGGTTGTGCTACCTGATGATATGTTTTTCTTCGGCTTaGAAAGAGCATGCAAATTCGGTTTCCTTTTCACTTTATTTAACA +
Preference number: 5 (lower is better)
Translates to: SLQRLCYLMICFSSA*KEHANSVSFSLYLT
Trigger: TGTTAAATAAAGTGAAAAGGAAACCGAATTTGCATGCTCTTTCCAAGCCGAAGAAAAACATATCATCAGGTAGCACAACCTCTGCAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS-3UTR CAA 90 bp ATCCAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCTTTCTCCAACACATCTaGCATCTGGTATTGATCAGA +
Preference number: 5 (lower is better)
Translates to: IQYLCQPVIWKTVNFRLSFLQHI*HLVLIR
Trigger: TCTGATCAATACCAGATGCAAGATGTGTTGGAGAAA...GCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCGAGGAAACAGCTCTTTaGCTGCAGCTATTAGATGAT +
Preference number: 5 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSEETAL*LQLLDD
Trigger: ATCATCTAATAGCTGCAGCAAAAGAGCTGTTTCCTC...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp AAAACTGTAAATTTCAGGTTGAGCAAGTTATTAGCAGCTTTCTGGGGCATACTGACACTCCCAGGCCTATaGTTTTTAAGGCTGTATATT +
Preference number: 5 (lower is better)
Translates to: KTVNFRLSKLLAAFWGILTLPGL*FLRLYI
Trigger: AATATACAGCCTTAAAAACAATAGGCCTGGGAGTGT...CAGTATGCCCCAGAAAGCTGCTAATAACTTGCTCAACCTGAAATTTACAGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS TCA 90 bp CTCTCCTCTGGGCTCAATAATATTATTCATATGTGCCTTGATAGCTaGATTCTGCAATGTCAAATCAGCAATTCGTGTCATTATGTCCTT +
Preference number: 5 (lower is better)
Translates to: LSSGLNNIIHMCLDS*ILQCQISNSCHYVL
Trigger: AAGGACATAATGACACGAATTGCTGATTTGACATTGCAGAATTCAGCTATCAAGGCACATATGAATAATATTATTGAGCCCAGAGGAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS TCA 90 bp TCAACCAGAAATAAGACATATGAGTCCCCTTCAAACACCAATGTTTaGACATCTCAGAGAACACATCAATTACTGGTACATGGAGCTTTT +
Preference number: 5 (lower is better)
Translates to: STRNKTYESPSNTNV*TSQRTHQLLVHGAF
Trigger: AAAAGCTCCATGTACCAGTAATTGATGTGTTCTCTGAGATGTTCAAACATTGGTGTTTGAAGGGGACTCATATGTCTTATTTCTGGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496105.1
CDS-3UTR CAA 90 bp AAGTTTCATTCACAGGGAGCTGTAGGTCAGTTGGTTGTTGAAAACTTATTTGAGCTCATTAAAGATAGATaGGGTGATAGGGTCTTGATT +
Preference number: 5 (lower is better)
Translates to: KFHSQGAVGQLVVENLFELIKDR*GDRVLI
Trigger: AATCAAGACCCTATCACCCAATCTATCTTTAATGAG...CTCAAATAAGTTTTCAACAACCAACTGACCTACAGCTCCCTGTGAATGAAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCTACTTGTTCCAGTTGTaGCCTTGTCTCTACTTCTTT +
Preference number: 5 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSYLFQL*PCLYFF
Trigger: AAAGAAGTAGAGACAAGGCAACAACTGGAACAAGTA...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCGGAGCTGTAGGTCAGTaGGTTGTTGAAAACTTATTT +
Preference number: 5 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSGAVGQ*VVENLF
Trigger: AAATAAGTTTTCAACAACCAACTGACCTACAGCTCC...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGACAAGTAATCTCAGTTaGAATTGTTCACTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKTSNLS*NCSLRL
Trigger: CAACCTGAGTGAACAATTCAAACTGAGATTACTTGT...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp CAGTATCTCTGCCAACCTGTAATTTGGAAAACTGTAAATTTCAGGTTGAGCAAGACTGTAAATTTCAGGTaGAGCAAGTTATTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: QYLCQPVIWKTVNFRLSKTVNFR*SKLLAA
Trigger: AGCTGCTAATAACTTGCTCAACCTGAAATTTACAGT...CTTGCTCAACCTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAGAGATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS CCA 90 bp TTATTAAGAACAAACTCAGTGAGACTTGACTTCACTTATGATACATaGGTAGAAAGAGCAAACCAGCCTTCTTCATTCTGTTTCTCAATC +
Preference number: 5 (lower is better)
Translates to: LLRTNSVRLDFTYDT*VERANQPSSFCFSI
Trigger: GATTGAGAAACAGAATGAAGAAGGCTGGTTTGCTCTTTCTACCCATGTATCATAAGTGAAGTCAAGTCTCACTGAGTTTGTTCTTAATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000467618.1
CDS-3UTR CAA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCTTATTTGTGACTGGGTaGCTATTTTCTGCTGAATGT +
Preference number: 5 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSLFVTG*LFSAEC
Trigger: ACATTCAGCAGAAAATAGCAACCCAGTCACAAATAA...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS-3UTR CAA 90 bp GAAAGCCAGACTCTAATCACACAGAGGAATTTTATTGTAAGTTACATGCAAAGCCTGCCAACCTGTAATTaGGAAAACTGTAAATTTCAG +
Preference number: 5 (lower is better)
Translates to: ESQTLITQRNFIVSYMQSLPTCN*ENCKFQ
Trigger: CTGAAATTTACAGTTTTCCAAATTACAGGTTGGCAG...GCTTTGCATGTAACTTACAATAAAATTCCTCTGTGTGATTAGAGTCTGGCTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS GCA 90 bp CTGGGCTCAATAATATTATTCATATGTGCCTTGATAGCTGAATTCTaGAATGTCAAATCAGCAATTCGTGTCATTATGTCCTTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: LGSIILFICALIAEF*NVKSAIRVIMSFLC
Trigger: ACAAAGAAAGGACATAATGACACGAATTGCTGATTTGACATTGCAGAATTCAGCTATCAAGGCACATATGAATAATATTATTGAGCCCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS GCA 72 bp CCCAACCGGGCGCCTGGATCCCAGGCAACAGACAGATaGCACCACCGTTCTCCCCACCCTTTTGGTAGCCCT +
Preference number: 6 (lower is better)
Translates to: PNRAPGSQATDR*HHRSPHPFGSP
Trigger: AGGGCTACCAAAAGGGTGGGGAGAACGGTGGTGGCATCTGTCTGTTGCCTGGGATCCAGGCGCCCGGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS GCA 72 bp AGCTCCCGAAAGCGGTGCGCACGCGCATACTCGAGGTaGTCTGGCGCCACGCACAAACATACCCAGACACGC +
Preference number: 6 (lower is better)
Translates to: SSRKRCARAYSR*SGATHKHTQTR
Trigger: GCGTGTCTGGGTATGTTTGTGCGTGGCGCCAGAGCACCTCGAGTATGCGCGTGCGCACCGCTTTCGGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496859.1
CDS CCA 72 bp CCGAAAGCGGTGCGCACGCGCATACTCGAGGTGCTCTaGCGCCACGCACAAACATACCCAGACACGCACCCT +
Preference number: 6 (lower is better)
Translates to: PKAVRTRILEVL*RHAQTYPDTHP
Trigger: AGGGTGCGTGTCTGGGTATGTTTGTGCGTGGCGCCAGAGCACCTCGAGTATGCGCGTGCGCACCGCTTTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496859.1
CDS TCA 72 bp TGCACTCTCAAAACACAGAGCCGCGGCTGCGCTTCCTaGAGTAAGGATTCCCCAACCGGGCGCCTGGATCCC +
Preference number: 6 (lower is better)
Translates to: CTLKTQSRGCAS*SKDSPTGRLDP
Trigger: GGGATCCAGGCGCCCGGTTGGGGAATCCTTACTTCAGGAAGCGCAGCCGCGGCTCTGTGTTTTGAGAGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS GCA 72 bp CAATTACCAGCTCTGTGCAAAAGCTCCCGAAAGCGGTaGGCACGCGCATACTCGAGGTGCTCTGGCGCCACG +
Preference number: 6 (lower is better)
Translates to: QLPALCKSSRKR*ARAYSRCSGAT
Trigger: CGTGGCGCCAGAGCACCTCGAGTATGCGCGTGCGCACCGCTTTCGGGAGCTTTTGCACAGAGCTGGTAATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496859.1
CDS CAA 90 bp GATCCCAGGCAACAGACAGATGCCACCACCGTTCTCCCCACCCTTTaGGTAGCCCTGGTCCCTAAGGCTCGTTGGGACTGCGAGCTGCAA +
Preference number: 6 (lower is better)
Translates to: DPRQQTDATTVLPTL*VALVPKARWDCELQ
Trigger: TTGCAGCTCGCAGTCCCAACGAGCCTTAGGGACCAGGGCTACCAAAAGGGTGGGGAGAACGGTGGTGGCATCTGTCTGTTGCCTGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS CAA 72 bp CAACAGACAGATGCCACCACCGTTCTCCCCACCCTTTaGGTAGCCCTGGTCCCTAAGGCTCGTTGGGACTGC +
Preference number: 6 (lower is better)
Translates to: QQTDATTVLPTL*VALVPKARWDC
Trigger: GCAGTCCCAACGAGCCTTAGGGACCAGGGCTACCAAAAGGGTGGGGAGAACGGTGGTGGCATCTGTCTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS CCA 72 bp CCCACCCTTTTGGTAGCCCTGGTCCCTAAGGCTCGTTaGGACTGCGAGCTGCAAGCCTCAGATCCATCATCT +
Preference number: 6 (lower is better)
Translates to: PTLLVALVPKAR*DCELQASDPSS
Trigger: AGATGATGGATCTGAGGCTTGCAGCTCGCAGTCCCAACGAGCCTTAGGGACCAGGGCTACCAAAAGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS TCA 72 bp GCACCCTGGATAGTTTGCCTCTCTCCTGCTACACGGTaGACTCCCCCAACGCTACAATCGAGCACCCCCAAT +
Preference number: 6 (lower is better)
Translates to: APWIVCLSPATR*TPPTLQSSTPN
Trigger: ATTGGGGGTGCTCGATTGTAGCGTTGGGGGAGTTCACCGTGTAGCAGGAGAGAGGCAAACTATCCAGGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000460832.1
ENST00000496859.1
CDS GCA 72 bp AACGCTACAATCGAGCACCCCCAATTACCAGCTCTGTaGAAAAGCTCCCGAAAGCGGTGCGCACGCGCATAC +
Preference number: 6 (lower is better)
Translates to: NATIEHPQLPAL*KSSRKRCARAY
Trigger: GTATGCGCGTGCGCACCGCTTTCGGGAGCTTTTGCACAGAGCTGGTAATTGGGGGTGCTCGATTGTAGCGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460832.1
ENST00000496859.1
CDS GCA 72 bp CGGTCCCAAAGCACCCTGGATAGTTTGCCTCTCTCCTaGTACACGGTGAACTCCCCCAACGCTACAATCGAG +
Preference number: 6 (lower is better)
Translates to: RSQSTLDSLPLS*YTVNSPNATIE
Trigger: CTCGATTGTAGCGTTGGGGGAGTTCACCGTGTAGCAGGAGAGAGGCAAACTATCCAGGGTGCTTTGGGACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460832.1
ENST00000496859.1
CDS TCA 72 bp TTCTTACACCAACTCGGGGACCACAGCGGTTCACTCTaGCAAATGACATCTTGCAGTCGGTCCCGACTGCCG +
Preference number: 6 (lower is better)
Translates to: FLHQLGDHSGSL*QMTSCSRSRLP
Trigger: CGGCAGTCGGGACCGACTGCAAGATGTCATTTGTCAGAGTGAACCGCTGTGGTCCCCGAGTTGGTGTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480527.1
CDS CAA 90 bp GCCCATCTCCCAGTACTGGGAGCTCTTCTGAGAATGTGGGGCTTCTaGACTGTTGAGTGTTGGAATGGGAATTGCAGAGGGGCTGTGAGA +
Preference number: 6 (lower is better)
Translates to: AHLPVLGALLRMWGF*TVECWNGNCRGAVR
Trigger: TCTCACAGCCCCTCTGCAATTCCCATTCCAACACTCAACAGTCAAGAAGCCCCACATTCTCAGAAGAGCTCCCAGTACTGGGAGATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS TCA 72 bp GGGAGCTCTTCTGAGAATGTGGGGCTTCTTGACTGTTaGGTGTTGGAATGGGAATTGCAGAGGGGCTGTGAG +
Preference number: 6 (lower is better)
Translates to: GSSSENVGLLDC*VLEWELQRGCE
Trigger: CTCACAGCCCCTCTGCAATTCCCATTCCAACACTCAACAGTCAAGAAGCCCCACATTCTCAGAAGAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS TCA 72 bp TTCTTACACCAACTCGGGGACCACAGCGGTTCACTCTaGCAAATGACATCAGCTCTGTGCAAAAGCTCCCGA +
Preference number: 6 (lower is better)
Translates to: FLHQLGDHSGSL*QMTSALCKSSR
Trigger: TCGGGAGCTTTTGCACAGAGCTGATGTCATTTGTCAGAGTGAACCGCTGTGGTCCCCGAGTTGGTGTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495812.5
CDS CCA 72 bp GCCCATCTCCCAGTACTGGGAGCTCTTCTGAGAATGTaGGGCTTCTTGACTGTTGAGTGTTGGAATGGGAAT +
Preference number: 6 (lower is better)
Translates to: AHLPVLGALLRM*GFLTVECWNGN
Trigger: ATTCCCATTCCAACACTCAACAGTCAAGAAGCCCCACATTCTCAGAAGAGCTCCCAGTACTGGGAGATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CAA 72 bp CCAGTACTGGGAGCTCTTCTGAGAATGTGGGGCTTCTaGACTGTTGAGTGTTGGAATGGGAATTGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: PVLGALLRMWGF*TVECWNGNCRG
Trigger: CCCTCTGCAATTCCCATTCCAACACTCAACAGTCAAGAAGCCCCACATTCTCAGAAGAGCTCCCAGTACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS TCA 72 bp TTGGCCAGATTCATGTTATCTGGAGGGTCTGGCACCTaGGACAGTTTAACGGGCAACTCTTCCTGTGGGAAT +
Preference number: 6 (lower is better)
Translates to: LARFMLSGGSGT*DSLTGNSSCGN
Trigger: ATTCCCACAGGAAGAGTTGCCCGTTAAACTGTCTCAGGTGCCAGACCCTCCAGATAACATGAATCTGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS TCA 72 bp TCCACGGACTCCTCAAAACTCACAGGAGGAGCCTTCTaGGAAGCCCCTCTGACATCCATCGATTTAAATGAC +
Preference number: 6 (lower is better)
Translates to: STDSSKLTGGAF*EAPLTSIDLND
Trigger: GTCATTTAAATCGATGGATGTCAGAGGGGCTTCTCAGAAGGCTCCTCCTGTGAGTTTTGAGGAGTCCGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496859.1
CDS CCA 72 bp TGGCACCTGAGACAGTTTAACGGGCAACTCTTCCTGTaGGAATTCAGCCACTTCCTCTCTGAACATCAATGG +
Preference number: 6 (lower is better)
Translates to: WHLRQFNGQLFL*EFSHFLSEHQW
Trigger: CCATTGATGTTCAGAGAGGAAGTGGCTGAATTCCCACAGGAAGAGTTGCCCGTTAAACTGTCTCAGGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CAA 90 bp TGTGCTACTGGAAAAGTAGAAGTCATGTCACTTGCACTTTCTTGTTaGTTCAACTCCCGGAGTCCATCCCCTTGCTCTCCTCTGGGCTCA +
Preference number: 6 (lower is better)
Translates to: CATGKVEVMSLALSC*FNSRSPSPCSPLGS
Trigger: TGAGCCCAGAGGAGAGCAAGGGGATGGACTCCGGGAGTTGAACAAACAAGAAAGTGCAAGTGACATGACTTCTACTTTTCCAGTAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CAA 90 bp AGACTGTGCTACTGGAAAAGTAGAAGTCATGTCACTTGCACTTTCTaGTTTGTTCAACTCCCGGAGTCCATCCCCTTGCTCTCCTCTGGG +
Preference number: 6 (lower is better)
Translates to: RLCYWKSRSHVTCTF*FVQLPESIPLLSSG
Trigger: CCCAGAGGAGAGCAAGGGGATGGACTCCGGGAGTTGAACAAACAAGAAAGTGCAAGTGACATGACTTCTACTTTTCCAGTAGCACAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS TCA 72 bp TTCTTACACCAACTCGGGGACCACAGCGGTTCACTCTaGCAAATGACATTTGCACTCTCAAAACACAGAGCC +
Preference number: 6 (lower is better)
Translates to: FLHQLGDHSGSL*QMTFALSKHRA
Trigger: GGCTCTGTGTTTTGAGAGTGCAAATGTCATTTGTCAGAGTGAACCGCTGTGGTCCCCGAGTTGGTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295872.8
CDS TCA 72 bp TTCTTACACCAACTCGGGGACCACAGCGGTTCACTCTaGCAAATGACATCTACTTCCTCTAGATTCGGATGG +
Preference number: 6 (lower is better)
Translates to: FLHQLGDHSGSL*QMTSTSSRFGW
Trigger: CCATCCGAATCTAGAGGAAGTAGATGTCATTTGTCAGAGTGAACCGCTGTGGTCCCCGAGTTGGTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496859.1
CDS CAA 90 bp GGGAATTCAGCCACTTCCTCTCTGAACATCAATGGCACTGAGACATaGGCATTTACAACTGGACGCTCTGGACTGTCCATAACTCTTCTA +
Preference number: 6 (lower is better)
Translates to: GNSATSSLNINGTET*AFTTGRSGLSITLL
Trigger: TAGAAGAGTTATGGACAGTCCAGAGCGTCCAGTTGTAAATGCCAATGTCTCAGTGCCATTGATGTTCAGAGAGGAAGTGGCTGAATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS TCA 72 bp GAATTCAGCCACTTCCTCTCTGAACATCAATGGCACTaGGACATTGGCATTTACAACTGGACGCTCTGGACT +
Preference number: 6 (lower is better)
Translates to: EFSHFLSEHQWH*DIGIYNWTLWT
Trigger: AGTCCAGAGCGTCCAGTTGTAAATGCCAATGTCTCAGTGCCATTGATGTTCAGAGAGGAAGTGGCTGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS TCA 72 bp CGGTTCACTCTGACAAATGACATAGGAGGAGCCTTCTaGGAAGCCCCTCTGACATCCATCGATTTAAATGAC +
Preference number: 6 (lower is better)
Translates to: RFTLTNDIGGAF*EAPLTSIDLND
Trigger: GTCATTTAAATCGATGGATGTCAGAGGGGCTTCTCAGAAGGCTCCTCCTATGTCATTTGTCAGAGTGAACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460832.1
CDS GCA 72 bp TCGCCTCACACACAGTTGCAACCATTCTTTTCCCTCTaGTTGGAACACTCATTAGGCTCACTCTCTTCTCTA +
Preference number: 6 (lower is better)
Translates to: SPHTQLQPFFSL*LEHSLGSLSSL
Trigger: TAGAGAAGAGAGTGAGCCTAATGAGTGTTCCAAGCAGAGGGAAAAGAATGGTTGCAACTGTGTGTGAGGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496859.1
CDS CCA 72 bp AAAATTCTTGGCCAGATTCATGTTATCTGGAGGGTCTaGCACCTGAGACAGTTTAACGGGCAACTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: KILGQIHVIWRV*HLRQFNGQLFL
Trigger: CAGGAAGAGTTGCCCGTTAAACTGTCTCAGGTGCCAGACCCTCCAGATAACATGAATCTGGCCAAGAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CAA 72 bp TGTGTATTTCATGACGGCGTACCAGATCTTCGGGAGTaGCCCGATGAACGGTTAGATCAGTCACGGTATTAT +
Preference number: 6 (lower is better)
Translates to: CVFHDGVPDLRE*PDERLDQSRYY
Trigger: ATAATACCGTGACTGATCTAACCGTTCATCGGGCAACTCCCGAAGATCTGGTACGCCGTCATGAAATACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295872.8
ENST00000460832.1
ENST00000480527.1
ENST00000495812.5
CDS CAA 72 bp GGAAAAGTAGAAGTCATGTCACTTGCACTTTCTTGTTaGTTCAACTCCCGGAGTCCATCCCCTTGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: GKVEVMSLALSC*FNSRSPSPCSP
Trigger: AGGAGAGCAAGGGGATGGACTCCGGGAGTTGAACAAACAAGAAAGTGCAAGTGACATGACTTCTACTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS GCA 72 bp TCCTTTCTTTGTATTAATGACTCATTTGTTCTCAGCTaGTGCCCATCTCCCAGTACTGGGAGCTCTTCTGAG +
Preference number: 6 (lower is better)
Translates to: SFLCINDSFVLS*CPSPSTGSSSE
Trigger: CTCAGAAGAGCTCCCAGTACTGGGAGATGGGCAGCAGCTGAGAACAAATGAGTCATTAATACAAAGAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CAA 72 bp TTGGAAACCCTGTGCGCCTACGAGGAAACAGCTCTTTaGCTGCAGCTATTAGATGATCAGATTTCTCCAACA +
Preference number: 6 (lower is better)
Translates to: LETLCAYEETAL*LQLLDDQISPT
Trigger: TGTTGGAGAAATCTGATCATCTAATAGCTGCAGCAAAAGAGCTGTTTCCTCGTAGGCGCACAGGGTTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295872.8
ENST00000480527.1
ENST00000495812.5
ENST00000496105.1
CDS CAA 72 bp AACACAGCTGGCTCAAAAATATGTGCTGGAAAATTCTaGGCCAGATTCATGTTATCTGGAGGGTCTGGCACC +
Preference number: 6 (lower is better)
Translates to: NTAGSKICAGKF*ARFMLSGGSGT
Trigger: GGTGCCAGACCCTCCAGATAACATGAATCTGGCCAAGAATTTTCCAGCACATATTTTTGAGCCAGCTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CAA 90 bp CTGTTACATTTGGAAACCCTGTGCGCCTACGAGGAAACAGCTCTTTaGCTGCAGCTATTAGATGATCAGATTTCTCCAACACATCTTGCA +
Preference number: 6 (lower is better)
Translates to: LLHLETLCAYEETAL*LQLLDDQISPTHLA
Trigger: TGCAAGATGTGTTGGAGAAATCTGATCATCTAATAGCTGCAGCAAAAGAGCTGTTTCCTCGTAGGCGCACAGGGTTTCCAAATGTAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295872.8
ENST00000480527.1
ENST00000495812.5
ENST00000496105.1
CDS CAA 90 bp AGGTTCTATGACAGACTCATTAAAGATAGATTGGGTGATAGGGTCTaGATTTACCACAATGGGACCCTGAGAGGAATCAGGAGCCACTGT +
Preference number: 6 (lower is better)
Translates to: RFYDRLIKDRLGDRV*IYHNGTLRGIRSHC
Trigger: ACAGTGGCTCCTGATTCCTCTCAGGGTCCCATTGTGGTAAATCAAGACCCTATCACCCAATCTATCTTTAATGAGTCTGTCATAGAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295872.8
ENST00000495812.5
ENST00000496105.1
CDS CAA 90 bp GTCACTTGCACTTTCTTGTTTGTTCAACTCCCGGAGTCCATCCCCTaGCTCTCCTCTGGGCTCAATAATATTATTCATATGTGCCTTGAT +
Preference number: 6 (lower is better)
Translates to: VTCTFLFVQLPESIP*LSSGLNNIIHMCLD
Trigger: ATCAAGGCACATATGAATAATATTATTGAGCCCAGAGGAGAGCAAGGGGATGGACTCCGGGAGTTGAACAAACAAGAAAGTGCAAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CCA 72 bp TTCCTTCTCAATTATTTCCACAGTTGGAGGAAGTCGTaGAGCAGGACGAGTTTGAACAGTCCTTCTCAATAC +
Preference number: 6 (lower is better)
Translates to: FLLNYFHSWRKS*SRTSLNSPSQY
Trigger: GTATTGAGAAGGACTGTTCAAACTCGTCCTGCTCCACGACTTCCTCCAACTGTGGAAATAATTGAGAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CAA 72 bp GACAGACTCATTAAAGATAGATTGGGTGATAGGGTCTaGATTTACCACAATGGGACCCTGAGAGGAATCAGG +
Preference number: 6 (lower is better)
Translates to: DRLIKDRLGDRV*IYHNGTLRGIR
Trigger: CCTGATTCCTCTCAGGGTCCCATTGTGGTAAATCAAGACCCTATCACCCAATCTATCTTTAATGAGTCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295872.8
ENST00000480527.1
ENST00000495812.5
ENST00000496105.1
CDS CAA 72 bp ATGATGGCGTTCCTGGAGGAGTTATTTGTGACTGGGTaGCTATTTTCTGCTGAATGTCAGTCCACAACTTAC +
Preference number: 6 (lower is better)
Translates to: MMAFLEELFVTG*LFSAECQSTTY
Trigger: GTAAGTTGTGGACTGACATTCAGCAGAAAATAGCAACCCAGTCACAAATAACTCCTCCAGGAACGCCATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295872.8
ENST00000467618.1
ENST00000496105.1
CDS GCA 72 bp TTTCTTTGTATTAATGACTCATTTGTTCTCAGCTGCTaGCCATCTCCCAGTACTGGGAGCTCTTCTGAGAAT +
Preference number: 6 (lower is better)
Translates to: FLCINDSFVLSC*PSPSTGSSSEN
Trigger: ATTCTCAGAAGAGCTCCCAGTACTGGGAGATGGGCAGCAGCTGAGAACAAATGAGTCATTAATACAAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS GCA 72 bp CTTTCTTGTTTGTTCAACTCCCGGAGTCCATCCCCTTaGTCTCCTCTGGGCTCAATAATATTATTCATATGT +
Preference number: 6 (lower is better)
Translates to: LSCLFNSRSPSP*SPLGSIILFIC
Trigger: ACATATGAATAATATTATTGAGCCCAGAGGAGAGCAAGGGGATGGACTCCGGGAGTTGAACAAACAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CAA 72 bp AGCCTGAGGTTCTATGACAGACTCATTAAAGATAGATaGGGTGATAGGGTCTTGATTTACCACAATGGGACC +
Preference number: 6 (lower is better)
Translates to: SLRFYDRLIKDR*GDRVLIYHNGT
Trigger: GGTCCCATTGTGGTAAATCAAGACCCTATCACCCAATCTATCTTTAATGAGTCTGTCATAGAACCTCAGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295872.8
ENST00000495812.5
ENST00000496105.1
CDS CAA 72 bp ACTTTCTTGTTTGTTCAACTCCCGGAGTCCATCCCCTaGCTCTCCTCTGGGCTCAATAATATTATTCATATG +
Preference number: 6 (lower is better)
Translates to: TFLFVQLPESIP*LSSGLNNIIHM
Trigger: CATATGAATAATATTATTGAGCCCAGAGGAGAGCAAGGGGATGGACTCCGGGAGTTGAACAAACAAGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CAA 90 bp ATCATTAAGAGCCTGAGGTTCTATGACAGACTCATTAAAGATAGATaGGGTGATAGGGTCTTGATTTACCACAATGGGACCCTGAGAGGA +
Preference number: 6 (lower is better)
Translates to: IIKSLRFYDRLIKDR*GDRVLIYHNGTLRG
Trigger: TCCTCTCAGGGTCCCATTGTGGTAAATCAAGACCCTATCACCCAATCTATCTTTAATGAGTCTGTCATAGAACCTCAGGCTCTTAATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295872.8
ENST00000495812.5
ENST00000496105.1
CDS TCA 72 bp AATCTTCTCCCATGTGAGAGACTCTCCATCTCTGAGTaGAGAGACGATTCTCTTCACTTGAATTCTGAATGT +
Preference number: 6 (lower is better)
Translates to: NLLPCERLSISE*RDDSLHLNSEC
Trigger: ACATTCAGAATTCAAGTGAAGAGAATCGTCTCTTCACTCAGAGATGGAGAGTCTCTCACATGGGAGAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS TCA 72 bp TTAAATCATGAATTTGTGACCAACCAGTCCATGCTCTaGGAGGTAACTGAACAGGTGACATTGGTGGAGAAA +
Preference number: 6 (lower is better)
Translates to: LNHEFVTNQSML*EVTEQVTLVEK
Trigger: TTTCTCCACCAATGTCACCTGTTCAGTTACCTCTCAGAGCATGGACTGGTTGGTCACAAATTCATGATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496105.1
CDS CCA 72 bp TGTCATTTGAGGAAGCCTAGAATAAACAGAGAGCCCTaGGGAAATGCATTACCATCTTTTTCCAGCAATTTC +
Preference number: 6 (lower is better)
Translates to: CHLRKPRINREP*GNALPSFSSNF
Trigger: GAAATTGCTGGAAAAAGATGGTAATGCATTTCCCCAGGGCTCTCTGTTTATTCTAGGCTTCCTCAAATGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496105.1
CDS CAA 72 bp TCCACTTCATGTATCATGTGTTTGAGGACATCCAGGTaGGAATTAGTCCTATTTGGTAAGTCTGCAGAGGTT +
Preference number: 6 (lower is better)
Translates to: STSCIMCLRTSR*ELVLFGKSAEV
Trigger: AACCTCTGCAGACTTACCAAATAGGACTAATTCCAACCTGGATGTCCTCAAACACATGATACATGAAGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CAA 90 bp ATTTCATGTTCCACTTCATGTATCATGTGTTTGAGGACATCCAGGTaGGAATTAGTCCTATTTGGTAAGTCTGCAGAGGTTGTGCTACCT +
Preference number: 6 (lower is better)
Translates to: ISCSTSCIMCLRTSR*ELVLFGKSAEVVLP
Trigger: AGGTAGCACAACCTCTGCAGACTTACCAAATAGGACTAATTCCAACCTGGATGTCCTCAAACACATGATACATGAAGTGGAACATGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CAA 90 bp TCCCCTTGCTCTCCTCTGGGCTCAATAATATTATTCATATGTGCCTaGATAGCTGAATTCTGCAATGTCAAATCAGCAATTCGTGTCATT +
Preference number: 6 (lower is better)
Translates to: SPCSPLGSIILFICA*IAEFCNVKSAIRVI
Trigger: AATGACACGAATTGCTGATTTGACATTGCAGAATTCAGCTATCAAGGCACATATGAATAATATTATTGAGCCCAGAGGAGAGCAAGGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CCA 72 bp AGGTTGTGCTACCTGATGATATGTTTTTCTTCGGCTTaGAAAGAGCATGCAAATTCGGTTTCCTTTTCACTT +
Preference number: 6 (lower is better)
Translates to: RLCYLMICFSSA*KEHANSVSFSL
Trigger: AAGTGAAAAGGAAACCGAATTTGCATGCTCTTTCCAAGCCGAAGAAAAACATATCATCAGGTAGCACAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CAA 90 bp AAGTCTGCAGAGGTTGTGCTACCTGATGATATGTTTTTCTTCGGCTaGGAAAGAGCATGCAAATTCGGTTTCCTTTTCACTTTATTTAAC +
Preference number: 6 (lower is better)
Translates to: KSAEVVLPDDMFFFG*ERACKFGFLFTLFN
Trigger: GTTAAATAAAGTGAAAAGGAAACCGAATTTGCATGCTCTTTCCAAGCCGAAGAAAAACATATCATCAGGTAGCACAACCTCTGCAGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS TCA 72 bp AGTTGTTGGAGAAACCTGTCTGTATTCGTGTTAGACTaGGAGTTTAGAGAGTTATCCAACTCATTCTCATTC +
Preference number: 6 (lower is better)
Translates to: SCWRNLSVFVLD*EFRELSNSFSF
Trigger: GAATGAGAATGAGTTGGATAACTCTCTAAACTCTCAGTCTAACACGAATACAGACAGGTTTCTCCAACAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS GCA 72 bp ACTGATATTATCCCAAATATTGATTTGTTTGTTGCCTaGTCCCCTACTCAAATGCTAGAGTATTCAAGCCCA +
Preference number: 6 (lower is better)
Translates to: TDIIPNIDLFVA*SPTQMLEYSSP
Trigger: TGGGCTTGAATACTCTAGCATTTGAGTAGGGGAGCAGGCAACAAACAAATCAATATTTGGGATAATATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496105.1
CDS CAA 72 bp TCTTCCATTTCATGTTCCACTTCATGTATCATGTGTTaGAGGACATCCAGGTTGGAATTAGTCCTATTTGGT +
Preference number: 6 (lower is better)
Translates to: SSISCSTSCIMC*RTSRLELVLFG
Trigger: ACCAAATAGGACTAATTCCAACCTGGATGTCCTCAAACACATGATACATGAAGTGGAACATGAAATGGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS CAA 72 bp CACTTAGCACTAACTGATATTATCCCAAATATTGATTaGTTTGTTGCCTGCTCCCCTACTCAAATGCTAGAG +
Preference number: 6 (lower is better)
Translates to: HLALTDIIPNID*FVACSPTQMLE
Trigger: CTCTAGCATTTGAGTAGGGGAGCAGGCAACAAACAAATCAATATTTGGGATAATATCAGTTAGTGCTAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496105.1
CDS TCA 72 bp GGAGGAGTTATTTGTGACTGGGTTGCTATTTTCTGCTaGATGTCAGTCCACAACTTACTAATTAACTCAAAA +
Preference number: 6 (lower is better)
Translates to: GGVICDWVAIFC*MSVHNLLINSK
Trigger: TTTTGAGTTAATTAGTAAGTTGTGGACTGACATTCAGCAGAAAATAGCAACCCAGTCACAAATAACTCCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295872.8
ENST00000467618.1
ENST00000496105.1
CDS CAA 90 bp GGACAGGAAAGAACGCAGTTGCAAATCCACAACTTGCTTTGTAACTaGATAAATCACATAACCTCTTTGTACCTCAGTTTACTTATTCAT +
Preference number: 6 (lower is better)
Translates to: GQERTQLQIHNLLCN*INHITSLYLSLLIH
Trigger: ATGAATAAGTAAACTGAGGTACAAAGAGGTTATGTGATTTATCAAGTTACAAAGCAAGTTGTGGATTTGCAACTGCGTTCTTTCCTGTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496105.1
CDS TCA 72 bp GGGCTCAATAATATTATTCATATGTGCCTTGATAGCTaGATTCTGCAATGTCAAATCAGCAATTCGTGTCAT +
Preference number: 6 (lower is better)
Translates to: GLNNIIHMCLDS*ILQCQISNSCH
Trigger: ATGACACGAATTGCTGATTTGACATTGCAGAATTCAGCTATCAAGGCACATATGAATAATATTATTGAGCCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295872.8
ENST00000496105.1
CDS TCA 72 bp AATAAGACATATGAGTCCCCTTCAAACACCAATGTTTaGACATCTCAGAGAACACATCAATTACTGGTACAT +
Preference number: 6 (lower is better)
Translates to: NKTYESPSNTNV*TSQRTHQLLVH
Trigger: ATGTACCAGTAATTGATGTGTTCTCTGAGATGTTCAAACATTGGTGTTTGAAGGGGACTCATATGTCTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496105.1
CDS CAA 72 bp AGAACGCAGTTGCAAATCCACAACTTGCTTTGTAACTaGATAAATCACATAACCTCTTTGTACCTCAGTTTA +
Preference number: 6 (lower is better)
Translates to: RTQLQIHNLLCN*INHITSLYLSL
Trigger: TAAACTGAGGTACAAAGAGGTTATGTGATTTATCAAGTTACAAAGCAAGTTGTGGATTTGCAACTGCGTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496105.1