RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPHK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000063176

Ensembl transcript IDs: ENST00000245222.9, ENST00000340932.7, ENST00000426514.2, ENST00000593308.1, ENST00000597434.5, ENST00000598088.5, ENST00000598574.1, ENST00000599029.2, ENST00000599033.1, ENST00000599748.5, ENST00000600537.5, ENST00000601704.1, ENST00000601712.5

Found 724 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCAGCAGCGCAGCCCGCGAGATGCCGCTACGCACCCAGCACAGGTaGACCAGGCCGTCGTCGAAGCGCGCATGCGGAGCTGCCACCAGG +
Preference number: 1 (lower is better)
Translates to: RSSAAREMPLRTQHR*TRPSSKRACGAATR
Trigger: CCTGGTGGCAGCTCCGCATGCGCGCTTCGACGACGGCCTGGTGCACCTGTGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGCTGCTGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR TCA 90 bp CTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACTaGGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCCC +
Preference number: 1 (lower is better)
Translates to: LSHPGRVGAGGKRQD*ALPRKGGPRSDARP
Trigger: GGGCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR GCA 90 bp CTACGCACCCAGCACAGGTGCACCAGGCCGTCGTCGAAGCGCGCATaGGGAGCTGCCACCAGGTCAGCGCCTAGGTGGCTGGGCGAGATG +
Preference number: 1 (lower is better)
Translates to: LRTQHRCTRPSSKRA*GAATRSAPRWLGEM
Trigger: CATCTCGCCCAGCCACCTAGGCGCTGACCTGGTGGCAGCTCCGCATGCGCGCTTCGACGACGGCCTGGTGCACCTGTGCTGGGTGCGTAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR TCA 90 bp CGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTCACTaGGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCG +
Preference number: 1 (lower is better)
Translates to: RSGWGEAAGPDRPTH*GLPQPVHSRSCHWA
Trigger: CGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR GCA 90 bp CCCGGGCAGCCAGGAGGCCCAGTGAGCAGTGTACCGATGCCAGGGTaGATCTGTGCCTGTAGCGGCCCATACTCCACCTGCTCCCCGTCC +
Preference number: 1 (lower is better)
Translates to: PGQPGGPVSSVPMPG*ICACSGPYSTCSPS
Trigger: GGACGGGGAGCAGGTGGAGTATGGGCCGCTACAGGCACAGATGCACCCTGGCATCGGTACACTGCTCACTGGGCCTCCTGGCTGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR CCA 90 bp CAGCGGGAGCCCGAGGCCAGCGTCACGGAGAGCAGGTCCAGTGGGTaGCCACCACCCCGGCACAGCAACAGTGAGCAGTTGAGCAACAGG +
Preference number: 1 (lower is better)
Translates to: QREPEASVTESRSSG*PPPRHSNSEQLSNR
Trigger: CCTGTTGCTCAACTGCTCACTGTTGCTGTGCCGGGGTGGTGGCCACCCACTGGACCTGCTCTCCGTGACGCTGGCCTCGGGCTCCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR TCA 90 bp CTGCCACCAGGTCAGCGCCTAGGTGGCTGGGCGAGATGGCCAACATaGGCACAAAGTCCCCCTCCAGCGTCACCCAGTCTGGGGGCAGCG +
Preference number: 1 (lower is better)
Translates to: LPPGQRLGGWARWPT*AQSPPPASPSLGAA
Trigger: CGCTGCCCCCAGACTGGGTGACGCTGGAGGGGGACTTTGTGCTCATGTTGGCCATCTCGCCCAGCCACCTAGGCGCTGACCTGGTGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR GCA 90 bp CCGATGCCAGGGTGCATCTGTGCCTGTAGCGGCCCATACTCCACCTaGTCCCCGTCCACTGTGAGCACGCCGCGTGGTGTGAGCGGCTCT +
Preference number: 1 (lower is better)
Translates to: PMPGCICACSGPYST*SPSTVSTPRGVSGS
Trigger: AGAGCCGCTCACACCACGCGGCGTGCTCACAGTGGACGGGGAGCAGGTGGAGTATGGGCCGCTACAGGCACAGATGCACCCTGGCATCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR TCA 90 bp GGTCCAGTGGGTGGCCACCACCCCGGCACAGCAACAGTGAGCAGTTaGGCAACAGGTCGAGGCCCAGGGCTGGCTCAAATCCCCCGTGCT +
Preference number: 1 (lower is better)
Translates to: GPVGGHHPGTATVSS*ATGRGPGLAQIPRA
Trigger: AGCACGGGGGATTTGAGCCAGCCCTGGGCCTCGACCTGTTGCTCAACTGCTCACTGTTGCTGTGCCGGGGTGGTGGCCACCCACTGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR CCA 90 bp TCGTCGAAGCGCGCATGCGGAGCTGCCACCAGGTCAGCGCCTAGGTaGCTGGGCGAGATGGCCAACATGAGCACAAAGTCCCCCTCCAGC +
Preference number: 1 (lower is better)
Translates to: SSKRACGAATRSAPR*LGEMANMSTKSPSS
Trigger: GCTGGAGGGGGACTTTGTGCTCATGTTGGCCATCTCGCCCAGCCACCTAGGCGCTGACCTGGTGGCAGCTCCGCATGCGCGCTTCGACGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR TCA 90 bp GGAGAGCAGGTCCAGTGGGTGGCCACCACCCCGGCACAGCAACAGTaGGCAGTTGAGCAACAGGTCGAGGCCCAGGGCTGGCTCAAATCC +
Preference number: 1 (lower is better)
Translates to: GEQVQWVATTPAQQQ*AVEQQVEAQGWLKS
Trigger: GGATTTGAGCCAGCCCTGGGCCTCGACCTGTTGCTCAACTGCTCACTGTTGCTGTGCCGGGGTGGTGGCCACCCACTGGACCTGCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR CCA 90 bp AAGAGACAGGTAGGAAAGCAGCTGGCAATGAGACCACGAAGGCCATaGCCCAGGCCCACCACAGCCGTGGGGCCACCTCCAGGCGACTCC +
Preference number: 1 (lower is better)
Translates to: KRQVGKQLAMRPRRP*PRPTTAVGPPPGDS
Trigger: GGAGTCGCCTGGAGGTGGCCCCACGGCTGTGGTGGGCCTGGGCCATGGCCTTCGTGGTCTCATTGCCAGCTGCTTTCCTACCTGTCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR CCA 90 bp CCCAGTGTGAAGCGGGCACTGCCCAAGGCCCTGAAGCGCTCGCTCTaGATATCCACATCTGACACGAAGCCCCAGGCCACAGACAGGAAG +
Preference number: 1 (lower is better)
Translates to: PSVKRALPKALKRSL*ISTSDTKPQATDRK
Trigger: CTTCCTGTCTGTGGCCTGGGGCTTCGTGTCAGATGTGGATATCCAGAGCGAGCGCTTCAGGGCCTTGGGCAGTGCCCGCTTCACACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR TCA 90 bp GGCACTGCCCAAGGCCCTGAAGCGCTCGCTCTGGATATCCACATCTaGCACGAAGCCCCAGGCCACAGACAGGAAGGAGAAACAGCGGGA +
Preference number: 1 (lower is better)
Translates to: GTAQGPEALALDIHI*HEAPGHRQEGETAG
Trigger: TCCCGCTGTTTCTCCTTCCTGTCTGTGGCCTGGGGCTTCGTGTCAGATGTGGATATCCAGAGCGAGCGCTTCAGGGCCTTGGGCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR CCA 90 bp AGTGCCTCCCATGCCAGGCAGAGTTCTGGGCGCTCGGGATACAGCTaGGAAGCAGGCAGGCAAAAATGTCCAGGAGCTGGGGGTGAGCAT +
Preference number: 1 (lower is better)
Translates to: SASHARQSSGRSGYS*EAGRQKCPGAGGEH
Trigger: ATGCTCACCCCCAGCTCCTGGACATTTTTGCCTGCCTGCTTCCCAGCTGTATCCCGAGCGCCCAGAACTCTGCCTGGCATGGGAGGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR CCA 90 bp CATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTaGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCC +
Preference number: 1 (lower is better)
Translates to: HFSLTVTTPTFQHHV*SHESERNPETGPGP
Trigger: GGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR CCA 90 bp AGCCGTGGGGCCACCTCCAGGCGACTCCTTACGGGGCCAGGTTCCTaGTCATCTTTCATTTGCTCCCTACAATTCACTGAGTGCCTCCCA +
Preference number: 1 (lower is better)
Translates to: SRGATSRRLLTGPGS*SSFICSLQFTECLP
Trigger: TGGGAGGCACTCAGTGAATTGTAGGGAGCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCGCCTGGAGGTGGCCCCACGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR TCA 90 bp GGGGCCAGGTTCCTGGTCATCTTTCATTTGCTCCCTACAATTCACTaGGTGCCTCCCATGCCAGGCAGAGTTCTGGGCGCTCGGGATACA +
Preference number: 1 (lower is better)
Translates to: GARFLVIFHLLPTIH*VPPMPGRVLGARDT
Trigger: TGTATCCCGAGCGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGTGAATTGTAGGGAGCAAATGAAAGATGACCAGGAACCTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR GCA 90 bp CCAGGTTCCTGGTCATCTTTCATTTGCTCCCTACAATTCACTGAGTaGCTCCCATGCCAGGCAGAGTTCTGGGCGCTCGGGATACAGCTG +
Preference number: 1 (lower is better)
Translates to: PGSWSSFICSLQFTE*LPCQAEFWALGIQL
Trigger: CAGCTGTATCCCGAGCGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGTGAATTGTAGGGAGCAAATGAAAGATGACCAGGAACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR-3UTR CCA 90 bp ACCAGGCCGTCGTCGAAGCGCGCATGCGGAGCTGCCACCAGGTCAGCGCCTAGGCTCAGGCTCAGCCCCTaGACCAGCTCCCGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: TRPSSKRACGAATRSAPRLRLSP*TSSRAW
Trigger: CCACGCCCGGGAGCTGGTCCAGGGGCTGAGCCTGAG...CCTAGGCGCTGACCTGGTGGCAGCTCCGCATGCGCGCTTCGACGACGGCCTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR CCA 90 bp CAGCGCAGCCCGCGAGATGCCGCTACGCACCCAGCACAGGTGCACCAGGCCGTCGCACGAGGCAGGCTATaGGCAGGGGTGGGCGAGGCA +
Preference number: 2 (lower is better)
Translates to: QRSPRDAATHPAQVHQAVARGRL*AGVGEA
Trigger: TGCCTCGCCCACCCCTGCCCATAGCCTGCCTCGTGC...GACGGCCTGGTGCACCTGTGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR GCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTGTCAGGACTGAGCCCTaGCCCGTAAGGGCGGCCCCA +
Preference number: 2 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTVRTEP*PVRAAP
Trigger: TGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGAC...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR TCA 90 bp CCATGGCCAAGAAAAGGCGCAGCAGCGCAGCCCGCGAGATGCCGCTACGCACCCAGAACGATGCAGGGGTaGGTGGGCCATGGGCGGGGC +
Preference number: 2 (lower is better)
Translates to: PWPRKGAAAQPARCRYAPRTMQG*VGHGRG
Trigger: GCCCCGCCCATGGCCCACTCACCCCTGCATCGTTCT...GGGTGCGTAGCGGCATCTCGCGGGCTGCGCTGCTGCGCCTTTTCTTGGCCATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR GCA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACCGGGGCCAGGGCCCCTaGCACCACAACTCTAGCAGC +
Preference number: 2 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDRGQGP*HHNSSS
Trigger: GCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCG...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR GCA 90 bp CCATGGCCAAGAAAAGGCGCAGCAGCGCAGCCCGCGAGATGCCGCTACGCACCCCCCGTGCTGGTTCACTaGTCCGGCCAGCGCGTTGCC +
Preference number: 2 (lower is better)
Translates to: PWPRKGAAAQPARCRYAPPVLVH*SGQRVA
Trigger: GGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGG...GGGTGCGTAGCGGCATCTCGCGGGCTGCGCTGCTGCGCCTTTTCTTGGCCATGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR CCA 90 bp GGCCAAGAAAAGGCGCAGCAGCGCAGCCCGCGAGATGCCGCTACGCACCCAGCAGGAGAGCAGGTCCAGTaGGTGGCCACCACCCCGGCA +
Preference number: 2 (lower is better)
Translates to: GQEKAQQRSPRDAATHPAGEQVQ*VATTPA
Trigger: TGCCGGGGTGGTGGCCACCCACTGGACCTGCTCTCC...TGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGCTGCTGCGCCTTTTCTTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR CCA 90 bp GGCCAAGAAAAGGCGCAGCAGCGCAGCCCGCGAGATGCCGCTACGCACCCAGCACCCGGGCATCAGGGGTaGGAAGTGGGAGCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: GQEKAQQRSPRDAATHPAPGHQG*EVGAQR
Trigger: CCTCTGGGCTCCCACTTCCCACCCCTGATGCCCGGG...TGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGCTGCTGCGCCTTTTCTTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR GCA 90 bp CCAGGAGGCCCAGTGAGCAGTGTACCGATGCCAGGGTGCATCTGTGCCTGTAGCCTCCGGCCAGCGCGTTaGCCGAGCCGCAGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: PGGPVSSVPMPGCICACSLRPAR*PSRRGG
Trigger: TCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAG...GCTACAGGCACAGATGCACCCTGGCATCGGTACACTGCTCACTGGGCCTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR CCA 90 bp CCATGGCCAAGAAAAGGCGCAGCAGCGCAGCCCGCGAGATGCCGCTACGCACCCGGTAGGTGTGCAGTGTaGCGAGGCCCAGCACCGTGC +
Preference number: 2 (lower is better)
Translates to: PWPRKGAAAQPARCRYAPGRCAV*RGPAPC
Trigger: GCACGGTGCTGGGCCTCGCCACACTGCACACCTACC...GGGTGCGTAGCGGCATCTCGCGGGCTGCGCTGCTGCGCCTTTTCTTGGCCATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR CCA 90 bp GAGACCACGAAGGCCATGGCCCAGGCCCACCACAGCCGTGGGGCCACCTCCAGGTGCCAGGCAGAGTTCTaGGCGCTCGGGATACAGCTG +
Preference number: 2 (lower is better)
Translates to: ETTKAMAQAHHSRGATSRCQAEF*ALGIQL
Trigger: CAGCTGTATCCCGAGCGCCCAGAACTCTGCCTGGCA...CCTGGAGGTGGCCCCACGGCTGTGGTGGGCCTGGGCCATGGCCTTCGTGGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR CAA 90 bp GCTGGCTCAAATCCCCCGTGCTGGTTCACTGCTCCGGCCAGCGCGTaGCCCGAGCCGCAGGGGAGGATGCCCACAGGCATCTTCACAGCT +
Preference number: 2 (lower is better)
Translates to: AGSNPPCWFTAPASA*PEPQGRMPTGIFTA
Trigger: AGCTGTGAAGATGCCTGTGGGCATCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGGGGATTTGAGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR CCA 90 bp TGGTTCACTGCTCCGGCCAGCGCGTTGCCCGAGCCGCAGGGGAGGATGCCCACAACCAGCTCCCGGGCGTaGTTCTGTCGTTCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: WFTAPASALPEPQGRMPTTSSRA*FCRSVW
Trigger: CCAGACAGAACGACAGAACCACGCCCGGGAGCTGGT...TGTGGGCATCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAGCAGTGAACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR CAA 90 bp AGGTCCAGTGGGTGGCCACCACCCCGGCACAGCAACAGTGAGCAGTaGAGCAACAGGTCGAGGCCCAGGGCTGGCTCAAATCCCCCGTGC +
Preference number: 2 (lower is better)
Translates to: RSSGWPPPRHSNSEQ*SNRSRPRAGSNPPC
Trigger: GCACGGGGGATTTGAGCCAGCCCTGGGCCTCGACCTGTTGCTCAACTGCTCACTGTTGCTGTGCCGGGGTGGTGGCCACCCACTGGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR TCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACTaGGCCCTGCCCCGTAAGGGC +
Preference number: 2 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGGKRQD*ALPRKG
Trigger: GCCCTTACGGGGCAGGGCTCAGTCCTGACGCTTGCC...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR TCA 90 bp GGTAGGAGAGGCGTCCGCGGTAGGTGTGCAGTGTGGCGAGGCCCAGCACCGTGCCCGGCACAGCAACAGTaGGCAGTTGAGCAACAGGTC +
Preference number: 2 (lower is better)
Translates to: GRRGVRGRCAVWRGPAPCPAQQQ*AVEQQV
Trigger: GACCTGTTGCTCAACTGCTCACTGTTGCTGTGCCGG...GCACGGTGCTGGGCCTCGCCACACTGCACACCTACCGCGGACGCCTCTCCTACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR GCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGTCAGGACTGAGCCCTaGCCCGTAAGGGCGGCCCCA +
Preference number: 2 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGVRTEP*PVRAAP
Trigger: TGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGAC...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR GCA 90 bp AGCCAGCTCTGGGCCCCCACCGTTGAGGGACAGGATGGGCAGGGGTTCTGGCGAAGCCGCAGGGGAGGATaGCCACAGGCATCTTCACAG +
Preference number: 2 (lower is better)
Translates to: SQLWAPTVEGQDGQGFWRSRRGG*PQASSQ
Trigger: CTGTGAAGATGCCTGTGGGCATCCTCCCCTGCGGCT...TCGCCAGAACCCCTGCCCATCCTGTCCCTCAACGGTGGGGGCCCAGAGCTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR GCA 90 bp GCCCAGGCCCACCACAGCCGTGGGGCCACCTCCAGGCGACTCCTTACGGGGCCACTACAATTCACTGAGTaGCTCCCATGCCAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: AQAHHSRGATSRRLLTGPLQFTE*LPCQAE
Trigger: CTCTGCCTGGCATGGGAGGCACTCAGTGAATTGTAG...TGGCCCCGTAAGGAGTCGCCTGGAGGTGGCCCCACGGCTGTGGTGGGCCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR-3UTR CCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGCCGGGTAGGAGCAGGTaGCAAGCGTCAGGACTGAGC +
Preference number: 2 (lower is better)
Translates to: APPGLIGQLNGGTGVDGAPGRSR*QASGLS
Trigger: GCTCAGTCCTGACGCTTGCCACCTGCTCCTACCCGG...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR TCA 90 bp CCGGCCGACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGAAGCGAGCGCAATCCTaGGACGGGGCCAGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: PADSLRPTPASTFQVLSLKRAQS*DGARAP
Trigger: AGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTT...CAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR GCA 90 bp GAAGAGGCAGGTCAGACACAGAACGATGCAGGGGTGAGTGGGCCATGGGCGGGGGGCTCAAATCCCCCGTaGTGGTTCACTGCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: EEAGQTQNDAGVSGPWAGGSNPP*WFTAPA
Trigger: GGCCGGAGCAGTGAACCAGCACGGGGGATTTGAGCC...CCCCGCCCATGGCCCACTCACCCCTGCATCGTTCTGTGTCTGACCTGCCTCTTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR CCA 90 bp CTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGATTCCAGCATCACGTCTaGTCCCATGAAAGCGAGCGC +
Preference number: 2 (lower is better)
Translates to: LNGGTGVDGARLRALTGRFQHHV*SHESER
Trigger: GCGCTCGCTTTCATGGGACCAGACGTGATGCTGGAA...TCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR CCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTTTCCAGCATCACGTCTaGTCCCATGAAAGCGAGCGC +
Preference number: 2 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTFQHHV*SHESER
Trigger: GCGCTCGCTTTCATGGGACCAGACGTGATGCTGGAA...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR CCA 90 bp CCAGGAGGCCCAGTGAGCAGTGTACCGATGCCAGGGTGCATCTGTGCCTGTAGCGGCTATGGGCAGGGGTaGGCGAGGCAGGTTCCACAG +
Preference number: 2 (lower is better)
Translates to: PGGPVSSVPMPGCICACSGYGQG*ARQVPQ
Trigger: CTGTGGAACCTGCCTCGCCCACCCCTGCCCATAGCC...GCTACAGGCACAGATGCACCCTGGCATCGGTACACTGCTCACTGGGCCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR TCA 90 bp AGTGAGCAGTTGAGCAACAGGTCGAGGCCCAGGGCTGGCTCAAATCCCCCGTGCCGTCTCCCGAGACCGTaGCGATGCCATCCCACTCAC +
Preference number: 2 (lower is better)
Translates to: SEQLSNRSRPRAGSNPPCRLPRP*RCHPTH
Trigger: GTGAGTGGGATGGCATCGTCACGGTCTCGGGAGACG...GCACGGGGGATTTGAGCCAGCCCTGGGCCTCGACCTGTTGCTCAACTGCTCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR CCA 90 bp GGAATTACGGGGGCCCCTTCGGAGACGGGTGAGTGTAGAGCTGCCTTGGGAGAGCCGTTCAGCACCTCATaGAGCAGCCCGTCTCCCGAG +
Preference number: 2 (lower is better)
Translates to: GITGAPSETGECRAALGEPFSTS*SSPSPE
Trigger: CTCGGGAGACGGGCTGCTCCATGAGGTGCTGAACGG...CTCTCCCAAGGCAGCTCTACACTCACCCGTCTCCGAAGGGGCCCCCGTAATTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR CCA 90 bp GGCCAAGAAAAGGCGCAGCAGCGCAGCCCGCGAGATGCCGCTACGCACCCAGCAAGTGTAGAGCTGCCTTaGGAGAGCCAGGAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: GQEKAQQRSPRDAATHPASVELP*ESQEVK
Trigger: CTTCACCTCCTGGCTCTCCCAAGGCAGCTCTACACT...TGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGCTGCTGCGCCTTTTCTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR TCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACAGGCCCCGCCCTCATTaGTCAGGCACTACCCTCGGG +
Preference number: 2 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDRPRPH*SGTTLG
Trigger: CCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCT...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR TCA 90 bp GAAGAGGCAGGTCAGACACAGAACGATGCAGGGGTGAGTGGGCCATGGGCGGGGGCAACAGTGAGCAGTTaGGCAACAGGTCGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: EEAGQTQNDAGVSGPWAGATVSS*ATGRGP
Trigger: TGGGCCTCGACCTGTTGCTCAACTGCTCACTGTTGC...CCCCGCCCATGGCCCACTCACCCCTGCATCGTTCTGTGTCTGACCTGCCTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR TCA 90 bp GGAATTACGGGGGCCCCTTCGGAGACGGGTGAGTGTAGAGCTGCCTTGGGAGAGCACTGCCCAAGGCCCTaGAGCGCTCGCTCTGGATAT +
Preference number: 2 (lower is better)
Translates to: GITGAPSETGECRAALGEHCPRP*SARSGY
Trigger: ATATCCAGAGCGAGCGCTTCAGGGCCTTGGGCAGTG...CTCTCCCAAGGCAGCTCTACACTCACCCGTCTCCGAAGGGGCCCCCGTAATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR TCA 90 bp GCCCACCACAGCCGTGGGGCCACCTCCAGGCGACTCCTTACGGGGCCAGGTTCCGCTGATTTACTTGACTaGCTGTGGGTTTGGCTGAGT +
Preference number: 2 (lower is better)
Translates to: AHHSRGATSRRLLTGPGSADLLD*LWVWLS
Trigger: ACTCAGCCAAACCCACAGTCAGTCAAGTAAATCAGC...GGAACCTGGCCCCGTAAGGAGTCGCCTGGAGGTGGCCCCACGGCTGTGGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR-3UTR CCA 90 bp CCGGCCGACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGCCGGGTAGGAGCAGGTaGCAAGCGTCAGGACTGAGC +
Preference number: 2 (lower is better)
Translates to: PADSLRPTPASTFQVLSLPGRSR*QASGLS
Trigger: GCTCAGTCCTGACGCTTGCCACCTGCTCCTACCCGG...CAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR CCA 90 bp GCTGGTTCACTGCTCCGGCCAGCGCGTTGCCCGAGCCGCAGGGGAGGATGCCCATTCTGTCGTTCTGTCTaGATGAGGTTGAAGGACAGC +
Preference number: 2 (lower is better)
Translates to: AGSLLRPARCPSRRGGCPFCRSV*MRLKDS
Trigger: GCTGTCCTTCAACCTCATCCAGACAGAACGACAGAA...TGGGCATCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAGCAGTGAACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR CCA 90 bp GCACTGCCCAAGGCCCTGAAGCGCTCGCTCTGGATATCCACATCTGACACGAAGGTCGAGGCCCAGGGCTaGCTCAAATCCCCCGTGCTG +
Preference number: 2 (lower is better)
Translates to: ALPKALKRSLWISTSDTKVEAQG*LKSPVL
Trigger: CAGCACGGGGGATTTGAGCCAGCCCTGGGCCTCGAC...CTTCGTGTCAGATGTGGATATCCAGAGCGAGCGCTTCAGGGCCTTGGGCAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR TCA 90 bp CCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCAAGCGAGCGCAATCCTaGGACGGGGCCAGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: PVHSRSCHWATRKIDSALKRAQS*DGARAP
Trigger: AGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTT...GAGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR CCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGTTCCAGCATCACGTCTaGTCCCATGAAAGCGAGCGC +
Preference number: 2 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQFQHHV*SHESER
Trigger: GCGCTCGCTTTCATGGGACCAGACGTGATGCTGGAA...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR TCA 90 bp CTACAATTCACTGAGTGCCTCCCATGCCAGGCAGAGTTCTGGGCGCTCGGGATAGACTGTGGGTTTGGCTaGGTGGGAGATATAGGGGTC +
Preference number: 2 (lower is better)
Translates to: LQFTECLPCQAEFWALGIDCGFG*VGDIGV
Trigger: GACCCCTATATCTCCCACTCAGCCAAACCCACAGTC...TATCCCGAGCGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGTGAATTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR-3UTR TCA 90 bp CTTTCATTTGCTCCCTACAATTCACTGAGTGCCTCCCATGCCAGGCAGAGTTCTTCCAGGAGCTGGGGGTaGGCATCCCACAGGCAGGCT +
Preference number: 2 (lower is better)
Translates to: LSFAPYNSLSASHARQSSSRSWG*ASHRQA
Trigger: AGCCTGCCTGTGGGATGCTCACCCCCAGCTCCTGGA...AGAACTCTGCCTGGCATGGGAGGCACTCAGTGAATTGTAGGGAGCAAATGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR-3UTR CCA 90 bp CCAGGTTCCTGGTCATCTTTCATTTGCTCCCTACAATTCACTGAGTGCCTCCCACGCTCGGGATACAGCTaGGAAGCAGGCAGGCAAAAA +
Preference number: 2 (lower is better)
Translates to: PGSWSSFICSLQFTECLPRSGYS*EAGRQK
Trigger: TTTTTGCCTGCCTGCTTCCCAGCTGTATCCCGAGCG...TGGGAGGCACTCAGTGAATTGTAGGGAGCAAATGAAAGATGACCAGGAACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR CCA 72 bp CCAGCGGAGGCAGCAGGTGGTCGGGCGGGCCGCAGGTaGAGGCCCCTACCCGGGCATCAGGGGTGGGAAGTG +
Preference number: 3 (lower is better)
Translates to: PAEAAGGRAGRR*RPLPGHQGWEV
Trigger: CACTTCCCACCCCTGATGCCCGGGTAGGGGCCTCCACCTGCGGCCCGCCCGACCACCTGCTGCCTCCGCTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR TCA 72 bp GAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTaGCCGGCCGACTCACTGAGGCCTACCCCAGCCAGT +
Preference number: 3 (lower is better)
Translates to: EAPEWMGRGCGP*PADSLRPTPAS
Trigger: ACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR GCA 72 bp GCCCAGGGCTGGCTCAAATCCCCCGTGCTGGTTCACTaGTCCGGCCAGCGCGTTGCCCGAGCCGCAGGGGAG +
Preference number: 3 (lower is better)
Translates to: AQGWLKSPVLVH*SGQRVARAAGE
Trigger: CTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGGGGATTTGAGCCAGCCCTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR CCA 72 bp GACCACGAAGGCCATGGCCCAGGCCCACCACAGCCGTaGGGCCACCTCCAGGCGACTCCTTACGGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: DHEGHGPGPPQP*GHLQATPYGAR
Trigger: CCTGGCCCCGTAAGGAGTCGCCTGGAGGTGGCCCCACGGCTGTGGTGGGCCTGGGCCATGGCCTTCGTGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR GCA 72 bp GCAGCCCGCGAGATGCCGCTACGCACCCAGCACAGGTaGACCAGGCCGTCGTCGAAGCGCGCATGCGGAGCT +
Preference number: 3 (lower is better)
Translates to: AAREMPLRTQHR*TRPSSKRACGA
Trigger: AGCTCCGCATGCGCGCTTCGACGACGGCCTGGTGCACCTGTGCTGGGTGCGTAGCGGCATCTCGCGGGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR TCA 72 bp CCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACTaGGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGAC +
Preference number: 3 (lower is better)
Translates to: PGRVGAGGKRQD*ALPRKGGPRSD
Trigger: GTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR GCA 72 bp CAGCACAGGTGCACCAGGCCGTCGTCGAAGCGCGCATaGGGAGCTGCCACCAGGTCAGCGCCTAGGTGGCTG +
Preference number: 3 (lower is better)
Translates to: QHRCTRPSSKRA*GAATRSAPRWL
Trigger: CAGCCACCTAGGCGCTGACCTGGTGGCAGCTCCGCATGCGCGCTTCGACGACGGCCTGGTGCACCTGTGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR CAA 90 bp CTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCTCAGGCTCCGCCCCATaGGAATGTAGGCCCCGCCCC +
Preference number: 3 (lower is better)
Translates to: LIGQLNGGTGVDGARLRASGSAP*ECRPRP
Trigger: GGGGCGGGGCCTACATTCCAATGGGGCGGAGCCTGA...GGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR CAA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGTCAGGCTCCGCCCCATaGGAATGTAGGCCCCGCCCC +
Preference number: 3 (lower is better)
Translates to: APPGLIGQLNGGTGVDGASGSAP*ECRPRP
Trigger: GGGGCGGGGCCTACATTCCAATGGGGCGGAGCCTGA...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR CAA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCAGGCTCCGCCCCATaGGAATGTAGGCCCCGCCCC +
Preference number: 3 (lower is better)
Translates to: PMKASAILRRGQGPCHHNSGSAP*ECRPRP
Trigger: GGGGCGGGGCCTACATTCCAATGGGGCGGAGCCTGA...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
3UTR-3UTR CAA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACCAGGCCCCGCCCTCATaGATCAGGCACTACCCTCGG +
Preference number: 3 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDQAPPS*IRHYPR
Trigger: CCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTG...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR TCA 72 bp TGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTCACTaGGGCCTACCCCAGCCAGTACATTCCAGGTCCTGT +
Preference number: 3 (lower is better)
Translates to: WGEAAGPDRPTH*GLPQPVHSRSC
Trigger: ACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR GCA 72 bp TGGCCAAGAAAAGGCGCAGCAGCGCAGCCCGCGAGATaGCGCTACGCACCCAGCACAGGTGCACCAGGCCGT +
Preference number: 3 (lower is better)
Translates to: WPRKGAAAQPAR*RYAPSTGAPGR
Trigger: ACGGCCTGGTGCACCTGTGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGCTGCTGCGCCTTTTCTTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR CCA 72 bp GGAACCTGCCCCTCCTGGGCTGATTGGCCAGCTAAATaGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGC +
Preference number: 3 (lower is better)
Translates to: GTCPSWADWPAK*RHRSGWGEAAG
Trigger: GCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGCAGGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR CAA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTTCAGGCTCCGCCCCATaGGAATGTAGGCCCCGCCCC +
Preference number: 3 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPISGSAP*ECRPRP
Trigger: GGGGCGGGGCCTACATTCCAATGGGGCGGAGCCTGA...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR TCA 72 bp GGCGGCCCCAGATCAGACGCCAGGCCCCGCCCTCATTaGTCAGGCACTACCCTCGGGACGAGCCCATTTCTC +
Preference number: 3 (lower is better)
Translates to: GGPRSDARPRPH*SGTTLGTSPFL
Trigger: GAGAAATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATCTGGGGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR GCA 72 bp GGGTGCATCTGTGCCTGTAGCGGCCCATACTCCACCTaGTCCCCGTCCACTGTGAGCACGCCGCGTGGTGTG +
Preference number: 3 (lower is better)
Translates to: GCICACSGPYST*SPSTVSTPRGV
Trigger: CACACCACGCGGCGTGCTCACAGTGGACGGGGAGCAGGTGGAGTATGGGCCGCTACAGGCACAGATGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR CCA 72 bp CGCGCATGCGGAGCTGCCACCAGGTCAGCGCCTAGGTaGCTGGGCGAGATGGCCAACATGAGCACAAAGTCC +
Preference number: 3 (lower is better)
Translates to: RACGAATRSAPR*LGEMANMSTKS
Trigger: GGACTTTGTGCTCATGTTGGCCATCTCGCCCAGCCACCTAGGCGCTGACCTGGTGGCAGCTCCGCATGCGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR CCA 72 bp GTAGGAAAGCAGCTGGCAATGAGACCACGAAGGCCATaGCCCAGGCCCACCACAGCCGTGGGGCCACCTCCA +
Preference number: 3 (lower is better)
Translates to: VGKQLAMRPRRP*PRPTTAVGPPP
Trigger: TGGAGGTGGCCCCACGGCTGTGGTGGGCCTGGGCCATGGCCTTCGTGGTCTCATTGCCAGCTGCTTTCCTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR-3UTR CAA 90 bp TCCAGCATCACGTCTGGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGTCAGGCTCCGCCCCATaGGAATGTAGGCCCCGCCCC +
Preference number: 3 (lower is better)
Translates to: SSITSGPMKASAILRRGQSGSAP*ECRPRP
Trigger: GGGGCGGGGCCTACATTCCAATGGGGCGGAGCCTGA...CTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR CAA 90 bp GAAGAGGCAGGTCAGACACAGAACGATGCAGGGGTGAGTGGGCCATGGGCGGGGAGGGTCAGCTCCGACTaGGCACGAGGCAGGCTATGG +
Preference number: 3 (lower is better)
Translates to: EEAGQTQNDAGVSGPWAGRVSSD*ARGRLW
Trigger: CCATAGCCTGCCTCGTGCCAAGTCGGAGCTGACCCT...CCCCGCCCATGGCCCACTCACCCCTGCATCGTTCTGTGTCTGACCTGCCTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR TCA 72 bp TCAGCACCTCATGGAGCAGCCCGTCTCCCGAGACCGTaGCGATGCCATCCCACTCACTCAGGCTCAGCCCCT +
Preference number: 3 (lower is better)
Translates to: SAPHGAARLPRP*RCHPTHSGSAP
Trigger: AGGGGCTGAGCCTGAGTGAGTGGGATGGCATCGTCACGGTCTCGGGAGACGGGCTGCTCCATGAGGTGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR TCA 72 bp GGTGGCCACCACCCCGGCACAGCAACAGTGAGCAGTTaGGCAACAGGTCGAGGCCCAGGGCTGGCTCAAATC +
Preference number: 3 (lower is better)
Translates to: GGHHPGTATVSS*ATGRGPGLAQI
Trigger: GATTTGAGCCAGCCCTGGGCCTCGACCTGTTGCTCAACTGCTCACTGTTGCTGTGCCGGGGTGGTGGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR TCA 72 bp GGTCAGCGCCTAGGTGGCTGGGCGAGATGGCCAACATaGGCACAAAGTCCCCCTCCAGCGTCACCCAGTCTG +
Preference number: 3 (lower is better)
Translates to: GQRLGGWARWPT*AQSPPPASPSL
Trigger: CAGACTGGGTGACGCTGGAGGGGGACTTTGTGCTCATGTTGGCCATCTCGCCCAGCCACCTAGGCGCTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR GCA 72 bp CCAGGAGGCCCAGTGAGCAGTGTACCGATGCCAGGGTaGATCTGTGCCTGTAGCGGCCCATACTCCACCTGC +
Preference number: 3 (lower is better)
Translates to: PGGPVSSVPMPG*ICACSGPYSTC
Trigger: GCAGGTGGAGTATGGGCCGCTACAGGCACAGATGCACCCTGGCATCGGTACACTGCTCACTGGGCCTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR-3UTR CAA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACCAGGCCCCGCCCTCATaGATCAGGCACTACCCTCGG +
Preference number: 3 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDQAPPS*IRHYPR
Trigger: CCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTG...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR CCA 72 bp AAGCGGGCACTGCCCAAGGCCCTGAAGCGCTCGCTCTaGATATCCACATCTGACACGAAGCCCCAGGCCACA +
Preference number: 3 (lower is better)
Translates to: KRALPKALKRSL*ISTSDTKPQAT
Trigger: TGTGGCCTGGGGCTTCGTGTCAGATGTGGATATCCAGAGCGAGCGCTTCAGGGCCTTGGGCAGTGCCCGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
3UTR CCA 72 bp CATGCCAGGCAGAGTTCTGGGCGCTCGGGATACAGCTaGGAAGCAGGCAGGCAAAAATGTCCAGGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: HARQSSGRSGYS*EAGRQKCPGAG
Trigger: CCCAGCTCCTGGACATTTTTGCCTGCCTGCTTCCCAGCTGTATCCCGAGCGCCCAGAACTCTGCCTGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR CCA 72 bp CAATTCACTGAGTGCCTCCCATGCCAGGCAGAGTTCTaGGCGCTCGGGATACAGCTGGGAAGCAGGCAGGCA +
Preference number: 3 (lower is better)
Translates to: QFTECLPCQAEF*ALGIQLGSRQA
Trigger: TGCCTGCCTGCTTCCCAGCTGTATCCCGAGCGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGTGAATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR CCA 72 bp TTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTaGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGG +
Preference number: 3 (lower is better)
Translates to: LTVTTPTFQHHV*SHESERNPETG
Trigger: CCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR CCA 72 bp GGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTaGGCGACGCGTAAAATAGACTCCGCCCTCAGCCAT +
Preference number: 3 (lower is better)
Translates to: GLPQPVHSRSCH*ATRKIDSALSH
Trigger: ATGGCTGAGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR-3UTR CAA 90 bp CTCCAGGCGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCTCCCTGGCAGGCTGATTTACTaGACTGACTGTGGGTTTGGC +
Preference number: 3 (lower is better)
Translates to: LQATPYGARFLVIFHLLPGRLIY*TDCGFG
Trigger: GCCAAACCCACAGTCAGTCAAGTAAATCAGCCTGCC...AGGGAGCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCGCCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR GCA 72 bp TTCATTTGCTCCCTACAATTCACTGAGTGCCTCCCATaGCAGGCAGAGTTCTGGGCGCTCGGGATACAGCTG +
Preference number: 3 (lower is better)
Translates to: FICSLQFTECLP*QAEFWALGIQL
Trigger: CAGCTGTATCCCGAGCGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGTGAATTGTAGGGAGCAAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR GCA 72 bp TGGTCATCTTTCATTTGCTCCCTACAATTCACTGAGTaGCTCCCATGCCAGGCAGAGTTCTGGGCGCTCGGG +
Preference number: 3 (lower is better)
Translates to: WSSFICSLQFTE*LPCQAEFWALG
Trigger: CCCGAGCGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGTGAATTGTAGGGAGCAAATGAAAGATGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR TCA 72 bp TTCCTGGTCATCTTTCATTTGCTCCCTACAATTCACTaGGTGCCTCCCATGCCAGGCAGAGTTCTGGGCGCT +
Preference number: 3 (lower is better)
Translates to: FLVIFHLLPTIH*VPPMPGRVLGA
Trigger: AGCGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGTGAATTGTAGGGAGCAAATGAAAGATGACCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR GCA 90 bp TGGCCCAGGCCCACCACAGCCGTGGGGCCACCTCCAGGCGACTCCTTACGGGGCGGTGGCGGCCCCATCTaGCCGGAAGGTGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: WPRPTTAVGPPPGDSLRGGGGPI*PEGASG
Trigger: GCCACTCGCACCTTCCGGGCAGATGGGGCCGCCACC...GCCCCGTAAGGAGTCGCCTGGAGGTGGCCCCACGGCTGTGGTGGGCCTGGGCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR TCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTTCCTCCGGGAGCCACTaGGAGGCCGTCGGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTSSGSH*EAVGVG
Trigger: CCCGACGCCGACGGCCTCTCAGTGGCTCCCGGAGGA...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS-3UTR GCA 90 bp AGCGTCAGGACTGAGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCCTCCGGCCAGCGCGTTaGCCGAGCCGCAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SVRTEPCPVRAAPDQTPGLRPAR*PSRRGG
Trigger: TCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAG...GCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGAGGCAGCCAGTGGCGGTaGGGGCGGGGCCATGGCCTT +
Preference number: 4 (lower is better)
Translates to: LNGGTGVDGARLRALTGRGSQWR*GRGHGL
Trigger: AAGGCCATGGCCCCGCCCCCACCGCCACTGGCTGCC...TCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTGGAGGAGCGGGGTGCTaGCAGCCAGTGGCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTGGAGC*QPVAVG
Trigger: CCCCACCGCCACTGGCTGCCAGCACCCCGCTCCTCC...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp AGCGTCAGGACTGAGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCGCACGCCGCGTGGTGTaGGCGGCTCTAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: SVRTEPCPVRAAPDQTPGARRVV*AALGGR
Trigger: CCTTCCGCCTAGAGCCGCTCACACCACGCGGCGTGC...GCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACCGAGGCTGCGGGCCCTaGCCGGCCGACTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDRGCGP*PADSLR
Trigger: CCTCAGTGAGTCGGCCGGTCAGGGCCCGCAGCCTCG...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp AGCCAGCTCTGGGCCCCCACCGTTGAGGGACAGGATGGGCAGGGGTTCTGGCGACTCCGGCCAGCGCGTTaGCCGAGCCGCAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SQLWAPTVEGQDGQGFWRLRPAR*PSRRGG
Trigger: TCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAG...TCGCCAGAACCCCTGCCCATCCTGTCCCTCAACGGTGGGGGCCCAGAGCTGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTGTGCTCCTAGGCCCGTaGCCCCAGCTCCCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTVLLGP*PQLPVS
Trigger: GCTGACCGGGAGCTGGGGCCACGGGCCTAGGAGCAC...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTCAGGCTCAGCCCCTaGACCAGCTCCCGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LNGGTGVDGARLRALTGRLRLSP*TSSRAW
Trigger: CCACGCCCGGGAGCTGGTCCAGGGGCTGAGCCTGAG...TCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAGCGGAGGCAGCAGGTaGTCGGGCGGGCCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHSGGSR*SGGPQV
Trigger: CACCTGCGGCCCGCCCGACCACCTGCTGCCTCCGCT...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACAGCGGAGGCAGCAGGTaGTCGGGCGGGCCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDSGGSR*SGGPQV
Trigger: CACCTGCGGCCCGCCCGACCACCTGCTGCCTCCGCT...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp AGCGTCAGGACTGAGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCCAGCGTCACCCAGTCTaGGGGCAGCGGGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SVRTEPCPVRAAPDQTPGQRHPV*GQRGAQ
Trigger: CTGGGCACCCCGCTGCCCCCAGACTGGGTGACGCTG...GCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GGTAGGAGAGGCGTCCGCGGTAGGTGTGCAGTGTGGCGAGGCCCAGCACCGTGCAGAACGATGCAGGGGTaGGTGGGCCATGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: GRRGVRGRCAVWRGPAPCRTMQG*VGHGRG
Trigger: GCCCCGCCCATGGCCCACTCACCCCTGCATCGTTCT...GCACGGTGCTGGGCCTCGCCACACTGCACACCTACCGCGGACGCCTCTCCTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR TCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTAGAACGATGCAGGGGTaGGTGGGCCATGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTRTMQG*VGHGRG
Trigger: GCCCCGCCCATGGCCCACTCACCCCTGCATCGTTCT...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACCTGGGCCCCCACCGTTaGGGGACAGGATGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHLGPHR*GTGWAG
Trigger: CCCTGCCCATCCTGTCCCTCAACGGTGGGGGCCCAG...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTAAGCGAGCGCAATCCTaGGACGGGGCCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTKRAQS*DGARAP
Trigger: AGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTT...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTGGCAAGCGTCAGGACTaGGCCCTGCCCCGTAAGGGC +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTGKRQD*ALPRKG
Trigger: GCCCTTACGGGGCAGGGCTCAGTCCTGACGCTTGCC...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp CTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCGAGGCTGCGGGCCCTaGCCGGCCGACTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: LIGQLNGGTGVDGARLRARGCGP*PADSLR
Trigger: CCTCAGTGAGTCGGCCGGTCAGGGCCCGCAGCCTCG...GGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACATCCTCCGGGAGCCACTaGGAGGCCGTCGGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATSSGSH*EAVGVG
Trigger: CCCGACGCCGACGGCCTCTCAGTGGCTCCCGGAGGA...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340932.7
ENST00000600537.5
CDS-3UTR TCA 90 bp GGCCCACCACAGCCGTGGGGCCACCTCCAGGCGACTCCTTACGGGGCCAGGTTCTCCAGGAGCTGGGGGTaGGCATCCCACAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GPPQPWGHLQATPYGARFSRSWG*ASHRQA
Trigger: AGCCTGCCTGTGGGATGCTCACCCCCAGCTCCTGGA...GAACCTGGCCCCGTAAGGAGTCGCCTGGAGGTGGCCCCACGGCTGTGGTGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR GCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTCATCTGCCCGGAAGGTaGGAGTGGCTCTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTHLPGR*EWLCAG
Trigger: CCCGGCGCAGAGCCACTCGCACCTTCCGGGCAGATG...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACACTCCGGCCAGCGCGTTaGCCGAGCCGCAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATLRPAR*PSRRGG
Trigger: TCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAG...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp GGTAGGAGAGGCGTCCGCGGTAGGTGTGCAGTGTGGCGAGGCCCAGCACCGTGCCCCGTGCTGGTTCACTaGTCCGGCCAGCGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: GRRGVRGRCAVWRGPAPCPVLVH*SGQRVA
Trigger: GGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGG...GCACGGTGCTGGGCCTCGCCACACTGCACACCTACCGCGGACGCCTCTCCTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR GCA 90 bp AGCGTCAGGACTGAGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCGCGCAGCCCGCGAGATaGCGCTACGCACCCAGCACA +
Preference number: 4 (lower is better)
Translates to: SVRTEPCPVRAAPDQTPGAQPAR*RYAPST
Trigger: TGTGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGC...GCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACGTGCTCCTAGGCCCGTaGCCCCAGCTCCCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDVLLGP*PQLPVS
Trigger: GCTGACCGGGAGCTGGGGCCACGGGCCTAGGAGCAC...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTGCGTGGGCCTCGGGCTaGGTAGGAGCCAAACTCGCC +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTAWASG*VGAKLA
Trigger: GGCGAGTTTGGCTCCTACCCAGCCCGAGGCCCACGC...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GACCACGAAGGCCATGGCCCAGGCCCACCACAGCCGTGGGGCCACCTCCAGGCGGGTTCTCTTCGTAGGTaGCGGCCCCATCTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: DHEGHGPGPPQPWGHLQAGSLRR*RPHLPG
Trigger: TCCGGGCAGATGGGGCCGCCACCTACGAAGAGAACC...CGCCTGGAGGTGGCCCCACGGCTGTGGTGGGCCTGGGCCATGGCCTTCGTGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp GCCCAGGCCCACCACAGCCGTGGGGCCACCTCCAGGCGACTCCTTACGGGGCCACCGTTCAGCACCTCATaGAGCAGCCCGTCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: AQAHHSRGATSRRLLTGPPFSTS*SSPSPE
Trigger: CTCGGGAGACGGGCTGCTCCATGAGGTGCTGAACGG...TGGCCCCGTAAGGAGTCGCCTGGAGGTGGCCCCACGGCTGTGGTGGGCCTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp AGCGTCAGGACTGAGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCGGAGAGCAGGTCCAGTaGGTGGCCACCACCCCGGCA +
Preference number: 4 (lower is better)
Translates to: SVRTEPCPVRAAPDQTPGGEQVQ*VATTPA
Trigger: TGCCGGGGTGGTGGCCACCCACTGGACCTGCTCTCC...GCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTGCACGAGGCAGGCTATaGGCAGGGGTGGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTARGRL*AGVGEA
Trigger: TGCCTCGCCCACCCCTGCCCATAGCCTGCCTCGTGC...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGAGTCCCCAGCCAGCTCTaGGCCCCCACCGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LNGGTGVDGARLRALTGRVPSQL*APTVEG
Trigger: TCCCTCAACGGTGGGGGCCCAGAGCTGGCTGGGGAC...TCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCAGCGGAGGCAGCAGGTaGTCGGGCGGGCCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRASGGSR*SGGPQV
Trigger: CACCTGCGGCCCGCCCGACCACCTGCTGCCTCCGCT...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAAGCGGAGGCAGCAGGTaGTCGGGCGGGCCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATSGGSR*SGGPQV
Trigger: CACCTGCGGCCCGCCCGACCACCTGCTGCCTCCGCT...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACCAGCGTCACCCAGTCTaGGGGCAGCGGGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHQRHPV*GQRGAQ
Trigger: CTGGGCACCCCGCTGCCCCCAGACTGGGTGACGCTG...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACCAGCGTCACCCAGTCTaGGGGCAGCGGGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDQRHPV*GQRGAQ
Trigger: CTGGGCACCCCGCTGCCCCCAGACTGGGTGACGCTG...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACCAGGGTGCAGCAGCCTaGGACCTCGGCCAACGGGAC +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHQGAAA*DLGQRD
Trigger: GTCCCGTTGGCCGAGGTCTCAGGCTGCTGCACCCTG...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGCTGGGCCCCCACCGTTaGGGGACAGGATGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGALGPHR*GTGWAG
Trigger: CCCTGCCCATCCTGTCCCTCAACGGTGGGGGCCCAG...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTGCGGACAGCCCAGGCTaGAGTGGCTACCACGCTCCA +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTADSPG*SGYHAP
Trigger: TGGAGCGTGGTAGCCACTTCAGCCTGGGCTGTCCGC...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GGCTCAAATCCCCCGTGCTGGTTCACTGCTCCGGCCAGCGCGTTGCCCGAGCCGGCGGACAGCCCAGGCTaGAGTGGCTACCACGCTCCA +
Preference number: 4 (lower is better)
Translates to: GSNPPCWFTAPASALPEPADSPG*SGYHAP
Trigger: TGGAGCGTGGTAGCCACTTCAGCCTGGGCTGTCCGC...CGGCTCGGGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGGGGATTTGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR TCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCGCACGCCGCGTGGTGTaGGCGGCTCTAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRAARRVV*AALGGR
Trigger: CCTTCCGCCTAGAGCCGCTCACACCACGCGGCGTGC...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACGCACGCCGCGTGGTGTaGGCGGCTCTAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNARRVV*AALGGR
Trigger: CCTTCCGCCTAGAGCCGCTCACACCACGCGGCGTGC...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp AGCGTCAGGACTGAGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCCTGAGTCTGAGGGGCTaGGGCTTCGCAGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SVRTEPCPVRAAPDQTPGLSLRG*GFAGCS
Trigger: GCTGCACCCTGCGAAGCCGCAGCCCCTCAGACTCAG...GCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GCTGGTTCACTGCTCCGGCCAGCGCGTTGCCCGAGCCGCAGGGGAGGATGCCCAGGCCCATACTCCACCTaGTCCCCGTCCACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: AGSLLRPARCPSRRGGCPGPYST*SPSTVS
Trigger: GCTCACAGTGGACGGGGAGCAGGTGGAGTATGGGCC...TGGGCATCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAGCAGTGAACCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR GCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACCGGGGCCAGGGCCCCTaGCACCACAACTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHRGQGP*HHNSSS
Trigger: GCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCG...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACGTCAGGACTGAGCCCTaGCCCGTAAGGGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDVRTEP*PVRAAP
Trigger: TGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGAC...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCGGGTGTCTGGCCGCCTaGTCTCCAGGGAGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRAGCLAA*SPGSGW
Trigger: CCACCCGCTCCCTGGAGAGCAGGCGGCCAGACACCC...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599748.5
CDS-3UTR CCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTCTCCCGGTCAGCTCCTaGTCTGGCCTCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTLPVSS*SGLWSC
Trigger: GCAGGACCAGAGGCCAGACCAGGAGCTGACCGGGAG...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245222.9
ENST00000598088.5
CDS-3UTR CCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCGTGCTCCTAGGCCCGTaGCCCCAGCTCCCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRAVLLGP*PQLPVS
Trigger: GCTGACCGGGAGCTGGGGCCACGGGCCTAGGAGCAC...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGGAGGAGCGGGGTGCTaGCAGCCAGTGGCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQGGAGC*QPVAVG
Trigger: CCCCACCGCCACTGGCTGCCAGCACCCCGCTCCTCC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACGCGTGGGCCTCGGGCTaGGTAGGAGCCAAACTCGCC +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHAWASG*VGAKLA
Trigger: GGCGAGTTTGGCTCCTACCCAGCCCGAGGCCCACGC...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GCCCAGGCCCACCACAGCCGTGGGGCCACCTCCAGGCGACTCCTTACGGGGCCAGCCTGGCTTCAGGTTTaGGGCGCAGCCGCTGTATGT +
Preference number: 4 (lower is better)
Translates to: AQAHHSRGATSRRLLTGPAWLQV*GAAAVC
Trigger: ACATACAGCGGCTGCGCCCCAAACCTGAAGCCAGGC...TGGCCCCGTAAGGAGTCGCCTGGAGGTGGCCCCACGGCTGTGGTGGGCCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACCTCAGGCTCAGCCCCTaGACCAGCTCCCGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNLRLSP*TSSRAW
Trigger: CCACGCCCGGGAGCTGGTCCAGGGGCTGAGCCTGAG...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GGCTCAAATCCCCCGTGCTGGTTCACTGCTCCGGCCAGCGCGTTGCCCGAGCCGGTCGAGGCCCAGGGCTaGCTCAAATCCCCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSNPPCWFTAPASALPEPVEAQG*LKSPVL
Trigger: CAGCACGGGGGATTTGAGCCAGCCCTGGGCCTCGAC...CGGCTCGGGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGGGGATTTGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACAGCAGGTCCAGTGGGTaGCCACCACCCCGGCACAGC +
Preference number: 4 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDSRSSG*PPPRHS
Trigger: GCTGTGCCGGGGTGGTGGCCACCCACTGGACCTGCT...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GGCCAAGAAAAGGCGCAGCAGCGCAGCCCGCGAGATGCCGCTACGCACCCAGCAAGCAGGTCCAGTGGGTaGCCACCACCCCGGCACAGC +
Preference number: 4 (lower is better)
Translates to: GQEKAQQRSPRDAATHPASRSSG*PPPRHS
Trigger: GCTGTGCCGGGGTGGTGGCCACCCACTGGACCTGCT...TGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGCTGCTGCGCCTTTTCTTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp CCATGGCCAAGAAAAGGCGCAGCAGCGCAGCCCGCGAGATGCCGCTACGCACCCGGAGAGCAGGTCCAGTaGGTGGCCACCACCCCGGCA +
Preference number: 4 (lower is better)
Translates to: PWPRKGAAAQPARCRYAPGEQVQ*VATTPA
Trigger: TGCCGGGGTGGTGGCCACCCACTGGACCTGCTCTCC...GGGTGCGTAGCGGCATCTCGCGGGCTGCGCTGCTGCGCCTTTTCTTGGCCATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp AGCGTCAGGACTGAGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCGGCTATGGGCAGGGGTaGGCGAGGCAGGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: SVRTEPCPVRAAPDQTPGGYGQG*ARQVPQ
Trigger: CTGTGGAACCTGCCTCGCCCACCCCTGCCCATAGCC...GCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ACCAGGCCGTCGTCGAAGCGCGCATGCGGAGCTGCCACCAGGTCAGCGCCTAGGGGCTATGGGCAGGGGTaGGCGAGGCAGGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: TRPSSKRACGAATRSAPRGYGQG*ARQVPQ
Trigger: CTGTGGAACCTGCCTCGCCCACCCCTGCCCATAGCC...CCTAGGCGCTGACCTGGTGGCAGCTCCGCATGCGCGCTTCGACGACGGCCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp CTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGAGGCTATGGGCAGGGGTaGGCGAGGCAGGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: LNGGTGVDGARLRALTGRGYGQG*ARQVPQ
Trigger: CTGTGGAACCTGCCTCGCCCACCCCTGCCCATAGCC...TCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACGCACGAGGCAGGCTATaGGCAGGGGTGGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDARGRL*AGVGEA
Trigger: TGCCTCGCCCACCCCTGCCCATAGCCTGCCTCGTGC...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GGCCAAGAAAAGGCGCAGCAGCGCAGCCCGCGAGATGCCGCTACGCACCCAGCAGTCCCCAGCCAGCTCTaGGCCCCCACCGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GQEKAQQRSPRDAATHPAVPSQL*APTVEG
Trigger: TCCCTCAACGGTGGGGGCCCAGAGCTGGCTGGGGAC...TGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGCTGCTGCGCCTTTTCTTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACCCCGGGCATCAGGGGTaGGAAGTGGGAGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDPGHQG*EVGAQR
Trigger: CCTCTGGGCTCCCACTTCCCACCCCTGATGCCCGGG...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACCCCGGGCATCAGGGGTaGGAAGTGGGAGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHPGHQG*EVGAQR
Trigger: CCTCTGGGCTCCCACTTCCCACCCCTGATGCCCGGG...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACCAGCGTCACCCAGTCTaGGGGCAGCGGGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNQRHPV*GQRGAQ
Trigger: CTGGGCACCCCGCTGCCCCCAGACTGGGTGACGCTG...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACATGGAGGCACCGGAGTaGATGGGGCGAGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHMEAPE*MGRGCG
Trigger: CCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCAT...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR CAA 72 bp AATCCCCCGTGCTGGTTCACTGCTCCGGCCAGCGCGTaGCCCGAGCCGCAGGGGAGGATGCCCACAGGCATC +
Preference number: 4 (lower is better)
Translates to: NPPCWFTAPASA*PEPQGRMPTGI
Trigger: GATGCCTGTGGGCATCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGGGGATT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR TCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACACAGGGTGCAGCAGCCTaGGACCTCGGCCAACGGGAC +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATQGAAA*DLGQRD
Trigger: GTCCCGTTGGCCGAGGTCTCAGGCTGCTGCACCCTG...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACACTCGGAGCAGACAGGTaGGGGCAGTGGCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATLGADR*GQWPSA
Trigger: AGCGCTGGGCCACTGCCCTCACCTGTCTGCTCCGAG...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCTCGGAGCAGACAGGTaGGGGCAGTGGCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRALGADR*GQWPSA
Trigger: AGCGCTGGGCCACTGCCCTCACCTGTCTGCTCCGAG...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACCTCGGAGCAGACAGGTaGGGGCAGTGGCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNLGADR*GQWPSA
Trigger: AGCGCTGGGCCACTGCCCTCACCTGTCTGCTCCGAG...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp AGCGTCAGGACTGAGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCCGTCTCCCGAGACCGTaGCGATGCCATCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: SVRTEPCPVRAAPDQTPGRLPRP*RCHPTH
Trigger: GTGAGTGGGATGGCATCGTCACGGTCTCGGGAGACG...GCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp CTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACGTCTCCCGAGACCGTaGCGATGCCATCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: LNGGTGVDGARLRALTGRRLPRP*RCHPTH
Trigger: GTGAGTGGGATGGCATCGTCACGGTCTCGGGAGACG...TCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAAGAACGATGCAGGGGTaGGTGGGCCATGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATRTMQG*VGHGRG
Trigger: GCCCCGCCCATGGCCCACTCACCCCTGCATCGTTCT...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp GAAGAGGCAGGTCAGACACAGAACGATGCAGGGGTGAGTGGGCCATGGGCGGGGCTGGGCCCCCACCGTTaGGGGACAGGATGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EEAGQTQNDAGVSGPWAGLGPHR*GTGWAG
Trigger: CCCTGCCCATCCTGTCCCTCAACGGTGGGGGCCCAG...CCCCGCCCATGGCCCACTCACCCCTGCATCGTTCTGTGTCTGACCTGCCTCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR TCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGCTGGGCCCCCACCGTTaGGGGACAGGATGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQLGPHR*GTGWAG
Trigger: CCCTGCCCATCCTGTCCCTCAACGGTGGGGGCCCAG...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTGGGCCCCCACCGTTaGGGGACAGGATGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQLGPHR*GTGWAG
Trigger: CCCTGCCCATCCTGTCCCTCAACGGTGGGGGCCCAG...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACGCGGACAGCCCAGGCTaGAGTGGCTACCACGCTCCA +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHADSPG*SGYHAP
Trigger: TGGAGCGTGGTAGCCACTTCAGCCTGGGCTGTCCGC...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGCACGCCGCGTGGTGTaGGCGGCTCTAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQARRVV*AALGGR
Trigger: CCTTCCGCCTAGAGCCGCTCACACCACGCGGCGTGC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGCACGCCGCGTGGTGTaGGCGGCTCTAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQARRVV*AALGGR
Trigger: CCTTCCGCCTAGAGCCGCTCACACCACGCGGCGTGC...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp CCGTTCAGCACCTCATGGAGCAGCCCGTCTCCCGAGACCGTGACGATGCCATCCGCACGCCGCGTGGTGTaGGCGGCTCTAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: PFSTSWSSPSPETVTMPSARRVV*AALGGR
Trigger: CCTTCCGCCTAGAGCCGCTCACACCACGCGGCGTGC...GGATGGCATCGTCACGGTCTCGGGAGACGGGCTGCTCCATGAGGTGCTGAACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR TCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAAAGCGAGCGCAATCCTaGGACGGGGCCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATKRAQS*DGARAP
Trigger: AGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTT...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACGGCAAGCGTCAGGACTaGGCCCTGCCCCGTAAGGGC +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNGKRQD*ALPRKG
Trigger: GCCCTTACGGGGCAGGGCTCAGTCCTGACGCTTGCC...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACGACCGGCCGACTCACTaGGGCCTACCCCAGCCAGTA +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHDRPTH*GLPQPV
Trigger: TACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGGTC...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGCATGGAGGAGCGGGGTaGTGGCAGCCAGTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGAHGGAG*WQPVAV
Trigger: CACCGCCACTGGCTGCCAGCACCCCGCTCCTCCATG...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATCTGCCCGGAAGGTaGGAGTGGCTCTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRAHLPGR*EWLCAG
Trigger: CCCGGCGCAGAGCCACTCGCACCTTCCGGGCAGATG...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACACATCTGCCCGGAAGGTaGGAGTGGCTCTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATHLPGR*EWLCAG
Trigger: CCCGGCGCAGAGCCACTCGCACCTTCCGGGCAGATG...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGGTGGCGGCCCCATCTaGCCGGAAGGTGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQGGGPI*PEGASG
Trigger: GCCACTCGCACCTTCCGGGCAGATGGGGCCGCCACC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp GGCCCACCACAGCCGTGGGGCCACCTCCAGGCGACTCCTTACGGGGCCAGGTTCAGCCGCAGGGGAGGATaGCCACAGGCATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: GPPQPWGHLQATPYGARFSRRGG*PQASSQ
Trigger: CTGTGAAGATGCCTGTGGGCATCCTCCCCTGCGGCT...GAACCTGGCCCCGTAAGGAGTCGCCTGGAGGTGGCCCCACGGCTGTGGTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR GCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTCTCCGGCCAGCGCGTTaGCCGAGCCGCAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGLRPAR*PSRRGG
Trigger: TCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAG...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACACCCGTGCTGGTTCACTaGTCCGGCCAGCGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATPVLVH*SGQRVA
Trigger: GGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGG...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGCCCGTGCTGGTTCACTaGTCCGGCCAGCGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGAPVLVH*SGQRVA
Trigger: GGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGG...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GGCCCAGGGCTGGCTCAAATCCCCCGTGCTGGTTCACTGCTCCGGCCAGCGCGTTCGTCGAAGCGCGCATaGGGAGCTGCCACCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GPGLAQIPRAGSLLRPARSSKRA*GAATRS
Trigger: TGACCTGGTGGCAGCTCCGCATGCGCGCTTCGACGA...ACGCGCTGGCCGGAGCAGTGAACCAGCACGGGGGATTTGAGCCAGCCCTGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR GCA 90 bp CTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGATCGTCGAAGCGCGCATaGGGAGCTGCCACCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LNGGTGVDGARLRALTGRSSKRA*GAATRS
Trigger: TGACCTGGTGGCAGCTCCGCATGCGCGCTTCGACGA...TCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTTCGTCGAAGCGCGCATaGGGAGCTGCCACCAGGTCA +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTSSKRA*GAATRS
Trigger: TGACCTGGTGGCAGCTCCGCATGCGCGCTTCGACGA...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACCGCACCCAGCACAGGTaGACCAGGCCGTCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHRTQHR*TRPSSK
Trigger: CTTCGACGACGGCCTGGTGCACCTGTGCTGGGTGCG...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAGCGCAGCCCGCGAGATaGCGCTACGCACCCAGCACA +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATAQPAR*RYAPST
Trigger: TGTGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGC...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGCGGGGCCAGGGCCCCTaGCACCACAACTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGARGQGP*HHNSSS
Trigger: GCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCG...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACCGGGGCCAGGGCCCCTaGCACCACAACTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNRGQGP*HHNSSS
Trigger: GCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCG...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACATCAGCTCTCCAACACTaGGCCCGCCGGGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATSALQH*ARRVLR
Trigger: CCGGAGGACCCGGCGGGCCCAGTGTTGGAGAGCTGA...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000600537.5
CDS-3UTR CCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGGCAGTGGCCCAGCGCTaGGCCTCGGCACGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGAAVAQR*ASARFS
Trigger: AGAGAACCGTGCCGAGGCCCAGCGCTGGGCCACTGC...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAGCAGTGGCCCAGCGCTaGGCCTCGGCACGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATAVAQR*ASARFS
Trigger: AGAGAACCGTGCCGAGGCCCAGCGCTGGGCCACTGC...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTCTCAGGCTCAGCCCCTaGACCAGCTCCCGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPILRLSP*TSSRAW
Trigger: CCACGCCCGGGAGCTGGTCCAGGGGCTGAGCCTGAG...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGCTCAGGCTCAGCCCCTaGACCAGCTCCCGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQLRLSP*TSSRAW
Trigger: CCACGCCCGGGAGCTGGTCCAGGGGCTGAGCCTGAG...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCGTTCAGCACCTCATGGAGCAGCCCGTCTCCCGAGACCGTGACGATGCCATCCCTCAGGCTCAGCCCCTaGACCAGCTCCCGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PFSTSWSSPSPETVTMPSLRLSP*TSSRAW
Trigger: CCACGCCCGGGAGCTGGTCCAGGGGCTGAGCCTGAG...GGATGGCATCGTCACGGTCTCGGGAGACGGGCTGCTCCATGAGGTGCTGAACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp GGCTCAAATCCCCCGTGCTGGTTCACTGCTCCGGCCAGCGCGTTGCCCGAGCCGCCGTTCAGCACCTCATaGAGCAGCCCGTCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: GSNPPCWFTAPASALPEPPFSTS*SSPSPE
Trigger: CTCGGGAGACGGGCTGCTCCATGAGGTGCTGAACGG...CGGCTCGGGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGGGGATTTGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACGTCGAGGCCCAGGGCTaGCTCAAATCCCCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDVEAQG*LKSPVL
Trigger: CAGCACGGGGGATTTGAGCCAGCCCTGGGCCTCGAC...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAAGCAGGTCCAGTGGGTaGCCACCACCCCGGCACAGC +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATSRSSG*PPPRHS
Trigger: GCTGTGCCGGGGTGGTGGCCACCCACTGGACCTGCT...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp AGCGTCAGGACTGAGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCGGGTCAGCTCCGACTTaGCACGAGGCAGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: SVRTEPCPVRAAPDQTPGGSAPT*HEAGYG
Trigger: CCCATAGCCTGCCTCGTGCCAAGTCGGAGCTGACCC...GCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACGATGGGCAGGGGTTCTaGCGAGCCAGGAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDDGQGF*RARRGQ
Trigger: CTGGCCTCTCCTGGCTCGCCAGAACCCCTGCCCATC...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCGTCCCCAGCCAGCTCTaGGCCCCCACCGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LIGQLNGGTGVDGARLRAVPSQL*APTVEG
Trigger: TCCCTCAACGGTGGGGGCCCAGAGCTGGCTGGGGAC...GGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACGTCCCCAGCCAGCTCTaGGCCCCCACCGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNVPSQL*APTVEG
Trigger: TCCCTCAACGGTGGGGGCCCAGAGCTGGCTGGGGAC...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp TGGTTCACTGCTCCGGCCAGCGCGTTGCCCGAGCCGCAGGGGAGGATGCCCACAAGGTCAGCGCCTAGGTaGCTGGGCGAGATGGCCAAC +
Preference number: 4 (lower is better)
Translates to: WFTAPASALPEPQGRMPTRSAPR*LGEMAN
Trigger: GTTGGCCATCTCGCCCAGCCACCTAGGCGCTGACCT...TGTGGGCATCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAGCAGTGAACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTCCGGGTAGGAGCAGGTaGCAAGCGTCAGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTPGRSR*QASGLS
Trigger: GCTCAGTCCTGACGCTTGCCACCTGCTCCTACCCGG...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGATGGAGGCACCGGAGTaGATGGGGCGAGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGAMEAPE*MGRGCG
Trigger: CCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCAT...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCATGGAGGCACCGGAGTaGATGGGGCGAGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: LIGQLNGGTGVDGARLRAMEAPE*MGRGCG
Trigger: CCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCAT...GGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACAGGGTGCAGCAGCCTaGGACCTCGGCCAACGGGAC +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQQGAAA*DLGQRD
Trigger: GTCCCGTTGGCCGAGGTCTCAGGCTGCTGCACCCTG...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp AGAAACAGCGGGAGCCCGAGGCCAGCGTCACGGAGAGCAGGTCCAGTGGGTGGCCGTCTCCCGAGACCGTaGCGATGCCATCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: RNSGSPRPASRRAGPVGGRLPRP*RCHPTH
Trigger: GTGAGTGGGATGGCATCGTCACGGTCTCGGGAGACG...GCCACCCACTGGACCTGCTCTCCGTGACGCTGGCCTCGGGCTCCCGCTGTTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR TCA 90 bp AGCGTCAGGACTGAGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCCACTGCCCAAGGCCCTaGAGCGCTCGCTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: SVRTEPCPVRAAPDQTPGHCPRP*SARSGY
Trigger: ATATCCAGAGCGAGCGCTTCAGGGCCTTGGGCAGTG...GCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTCTGGGCCCCCACCGTTaGGGGACAGGATGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGLGPHR*GTGWAG
Trigger: CCCTGCCCATCCTGTCCCTCAACGGTGGGGGCCCAG...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACGCGGACAGCCCAGGCTaGAGTGGCTACCACGCTCCA +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNADSPG*SGYHAP
Trigger: TGGAGCGTGGTAGCCACTTCAGCCTGGGCTGTCCGC...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp CTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCGCGGACAGCCCAGGCTaGAGTGGCTACCACGCTCCA +
Preference number: 4 (lower is better)
Translates to: LIGQLNGGTGVDGARLRAADSPG*SGYHAP
Trigger: TGGAGCGTGGTAGCCACTTCAGCCTGGGCTGTCCGC...GGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACAGCCAGGAGGCCCAGTaGGCAGTGTACCGATGCCAG +
Preference number: 4 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDSQEAQ*AVYRCQ
Trigger: CTGGCATCGGTACACTGCTCACTGGGCCTCCTGGCT...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAAAGCGAGCGCAATCCTaGGACGGGGCCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQKRAQS*DGARAP
Trigger: AGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTT...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAAGGCCCCGCCCTCATTaGTCAGGCACTACCCTCGGG +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATRPRPH*SGTTLG
Trigger: CCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCT...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp CCGGCCGACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGCGAGGCTGCGGGCCCTaGCCGGCCGACTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: PADSLRPTPASTFQVLSLRGCGP*PADSLR
Trigger: CCTCAGTGAGTCGGCCGGTCAGGGCCCGCAGCCTCG...CAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GAAGCAGGCAGGCAAAAATGTCCAGGAGCTGGGGGTGAGCATCCCACAGGCAGGTCCTCCGGGAGCCACTaGGAGGCCGTCGGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: EAGRQKCPGAGGEHPTGRSSGSH*EAVGVG
Trigger: CCCGACGCCGACGGCCTCTCAGTGGCTCCCGGAGGA...CCTGCCTGTGGGATGCTCACCCCCAGCTCCTGGACATTTTTGCCTGCCTGCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR TCA 90 bp GGTAGGAGAGGCGTCCGCGGTAGGTGTGCAGTGTGGCGAGGCCCAGCACCGTGCGTAGCAGGTCAGGGGTaGTCTCTGGTCCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GRRGVRGRCAVWRGPAPCVAGQG*SLVLLL
Trigger: GAGCAGCAGGACCAGAGATCACCCCTGACCTGCTAC...GCACGGTGCTGGGCCTCGCCACACTGCACACCTACCGCGGACGCCTCTCCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR GCA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTCATGGAGGAGCGGGGTaGTGGCAGCCAGTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPIHGGAG*WQPVAV
Trigger: CACCGCCACTGGCTGCCAGCACCCCGCTCCTCCATG...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACATGGAGGAGCGGGGTaGTGGCAGCCAGTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQHGGAG*WQPVAV
Trigger: CACCGCCACTGGCTGCCAGCACCCCGCTCCTCCATG...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp CTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCTGCGGCTTCGCAGGGTaGAGCAGCCTGAGACCTCGG +
Preference number: 4 (lower is better)
Translates to: LIGQLNGGTGVDGARLRACGFAG*SSLRPR
Trigger: CCGAGGTCTCAGGCTGCTGCACCCTGCGAAGCCGCA...GGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GGCCCAGGGCTGGCTCAAATCCCCCGTGCTGGTTCACTGCTCCGGCCAGCGCGTAGCCGCAGGGGAGGATaGCCACAGGCATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: GPGLAQIPRAGSLLRPARSRRGG*PQASSQ
Trigger: CTGTGAAGATGCCTGTGGGCATCCTCCCCTGCGGCT...ACGCGCTGGCCGGAGCAGTGAACCAGCACGGGGGATTTGAGCCAGCCCTGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR GCA 90 bp TGGGAAGCAGGCAGGCAAAAATGTCCAGGAGCTGGGGGTGAGCATCCCACAGGCCTCCGGCCAGCGCGTTaGCCGAGCCGCAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: WEAGRQKCPGAGGEHPTGLRPAR*PSRRGG
Trigger: TCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAG...GCCTGTGGGATGCTCACCCCCAGCTCCTGGACATTTTTGCCTGCCTGCTTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR GCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACCCGTGCTGGTTCACTaGTCCGGCCAGCGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQPVLVH*SGQRVA
Trigger: GGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGG...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp GGCCAAGAAAAGGCGCAGCAGCGCAGCCCGCGAGATGCCGCTACGCACCCAGCAGGCTCAAATCCCCCGTaGTGGTTCACTGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: GQEKAQQRSPRDAATHPAGSNPP*WFTAPA
Trigger: GGCCGGAGCAGTGAACCAGCACGGGGGATTTGAGCC...TGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGCTGCTGCGCCTTTTCTTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR GCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACCGCACCCAGCACAGGTaGACCAGGCCGTCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNRTQHR*TRPSSK
Trigger: CTTCGACGACGGCCTGGTGCACCTGTGCTGGGTGCG...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp GACTTGGCACGAGGCAGGCTATGGGCAGGGGTGGGCGAGGCAGGTTCCACAGTGCGCACCCAGCACAGGTaGACCAGGCCGTCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: DLARGRLWAGVGEAGSTVRTQHR*TRPSSK
Trigger: CTTCGACGACGGCCTGGTGCACCTGTGCTGGGTGCG...CACTGTGGAACCTGCCTCGCCCACCCCTGCCCATAGCCTGCCTCGTGCCAAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR GCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACACGCACCCAGCACAGGTaGACCAGGCCGTCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATRTQHR*TRPSSK
Trigger: CTTCGACGACGGCCTGGTGCACCTGTGCTGGGTGCG...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTGTCAGGACTGAGCCCTaGCCCGTAAGGGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPIVRTEP*PVRAAP
Trigger: TGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGAC...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGTCAGGACTGAGCCCTaGCCCGTAAGGGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQVRTEP*PVRAAP
Trigger: TGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGAC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCACAGGCCCTCTCCCTaGCCTCTGCCCGGATTCTGC +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRAHRPSP*PLPGFC
Trigger: GCAGAATCCGGGCAGAGGGCAGGGAGAGGGCCTGTG...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599748.5
CDS-3UTR GCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACACGCAGCCGCTGTATGTaGAGGGCCTGGTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATRSRCM*RAWSCC
Trigger: GCAGCAGGACCAGGCCCTGCACATACAGCGGCTGCG...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600537.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAATCAGCTCTCCAACACTaGGCCCGCCGGGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQSALQH*ARRVLR
Trigger: CCGGAGGACCCGGCGGGCCCAGTGTTGGAGAGCTGA...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000600537.5
CDS-3UTR CCA 90 bp GACCACGAAGGCCATGGCCCAGGCCCACCACAGCCGTGGGGCCACCTCCAGGCGACATCAACGGGACCCTaGCCCTGGGTCTTAAGCCAT +
Preference number: 4 (lower is better)
Translates to: DHEGHGPGPPQPWGHLQATSTGP*PWVLSH
Trigger: ATGGCTTAAGACCCAGGGCCAGGGTCCCGTTGATGT...CGCCTGGAGGTGGCCCCACGGCTGTGGTGGGCCTGGGCCATGGCCTTCGTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGCTCCCGGTCAGCTCCTaGTCTGGCCTCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGALPVSS*SGLWSC
Trigger: GCAGGACCAGAGGCCAGACCAGGAGCTGACCGGGAG...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245222.9
ENST00000598088.5
CDS-3UTR CCA 90 bp CCGGCCGACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGAGGAGCGGGGTGCTaGCAGCCAGTGGCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PADSLRPTPASTFQVLSLGGAGC*QPVAVG
Trigger: CCCCACCGCCACTGGCTGCCAGCACCCCGCTCCTCC...CAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACGAGCCAAACTCGCCATaGAGGAGCGGGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHEPNSP*RSGVLA
Trigger: TGCCAGCACCCCGCTCCTCCATGGCGAGTTTGGCTC...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAGGTGAGGGCAAAGCGTaGGCCTCGGGCTGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATGEGKA*ASGWVG
Trigger: TCCTACCCAGCCCGAGGCCCACGCTTTGCCCTCACC...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTGCCTGGCTTCAGGTTTaGGGCGCAGCCGCTGTATGT +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTAWLQV*GAAAVC
Trigger: ACATACAGCGGCTGCGCCCCAAACCTGAAGCCAGGC...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGCCCATCCCCGGGCAGTaGCAGTCCTCGGAGCAGACA +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGAPIPGQ*QSSEQT
Trigger: TGTCTGCTCCGAGGACTGCCACTGCCCGGGGATGGG...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACACCCATCCCCGGGCAGTaGCAGTCCTCGGAGCAGACA +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATPIPGQ*QSSEQT
Trigger: TGTCTGCTCCGAGGACTGCCACTGCCCGGGGATGGG...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTACCAGCTCCCGGGCGTaGTTCTGTCGTTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTTSSRA*FCRSVW
Trigger: CCAGACAGAACGACAGAACCACGCCCGGGAGCTGGT...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGGTCGAGGCCCAGGGCTaGCTCAAATCCCCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGAVEAQG*LKSPVL
Trigger: CAGCACGGGGGATTTGAGCCAGCCCTGGGCCTCGAC...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAGTCGAGGCCCAGGGCTaGCTCAAATCCCCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATVEAQG*LKSPVL
Trigger: CAGCACGGGGGATTTGAGCCAGCCCTGGGCCTCGAC...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTGGAGAGCAGGTCCAGTaGGTGGCCACCACCCCGGCA +
Preference number: 4 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPIGEQVQ*VATTPA
Trigger: TGCCGGGGTGGTGGCCACCCACTGGACCTGCTCTCC...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGGAGAGCAGGTCCAGTaGGTGGCCACCACCCCGGCA +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQGEQVQ*VATTPA
Trigger: TGCCGGGGTGGTGGCCACCCACTGGACCTGCTCTCC...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGGAGAGCAGGTCCAGTaGGTGGCCACCACCCCGGCA +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQGEQVQ*VATTPA
Trigger: TGCCGGGGTGGTGGCCACCCACTGGACCTGCTCTCC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCGGTAGGTGTGCAGTGTaGCGAGGCCCAGCACCGTGC +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRAGRCAV*RGPAPC
Trigger: GCACGGTGCTGGGCCTCGCCACACTGCACACCTACC...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAGGTAGGTGTGCAGTGTaGCGAGGCCCAGCACCGTGC +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATGRCAV*RGPAPC
Trigger: GCACGGTGCTGGGCCTCGCCACACTGCACACCTACC...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACAGGCAGGTTCCACAGTaGCGGGGAGGTAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDRQVPQ*RGGRRG
Trigger: GCCTCTCCTACCTCCCCGCCACTGTGGAACCTGCCT...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTGCACGAGGCAGGCTATaGGCAGGGGTGGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPIARGRL*AGVGEA
Trigger: TGCCTCGCCCACCCCTGCCCATAGCCTGCCTCGTGC...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGCACGAGGCAGGCTATaGGCAGGGGTGGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQARGRL*AGVGEA
Trigger: TGCCTCGCCCACCCCTGCCCATAGCCTGCCTCGTGC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GACTTGGCACGAGGCAGGCTATGGGCAGGGGTGGGCGAGGCAGGTTCCACAGTGGATGGGCAGGGGTTCTaGCGAGCCAGGAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: DLARGRLWAGVGEAGSTVDGQGF*RARRGQ
Trigger: CTGGCCTCTCCTGGCTCGCCAGAACCCCTGCCCATC...CACTGTGGAACCTGCCTCGCCCACCCCTGCCCATAGCCTGCCTCGTGCCAAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACGATGGGCAGGGGTTCTaGCGAGCCAGGAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNDGQGF*RARRGQ
Trigger: CTGGCCTCTCCTGGCTCGCCAGAACCCCTGCCCATC...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp CTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCTGGGAGCCCAGAGGATaGGGGAATTACGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LIGQLNGGTGVDGARLRAWEPRG*GNYGGP
Trigger: GGGGCCCCCGTAATTCCCCCATCCTCTGGGCTCCCA...GGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTGGGAGCCCAGAGGATaGGGGAATTACGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNWEPRG*GNYGGP
Trigger: GGGGCCCCCGTAATTCCCCCATCCTCTGGGCTCCCA...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACCCGGGCATCAGGGGTaGGAAGTGGGAGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQPGHQG*EVGAQR
Trigger: CCTCTGGGCTCCCACTTCCCACCCCTGATGCCCGGG...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp CCGGCCGACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGAGCGGAGGCAGCAGGTaGTCGGGCGGGCCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PADSLRPTPASTFQVLSLSGGSR*SGGPQV
Trigger: CACCTGCGGCCCGCCCGACCACCTGCTGCCTCCGCT...CAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TGTGAAGCGGGCACTGCCCAAGGCCCTGAAGCGCTCGCTCTGGATATCCACATCAGCGGAGGCAGCAGGTaGTCGGGCGGGCCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: CEAGTAQGPEALALDIHISGGSR*SGGPQV
Trigger: CACCTGCGGCCCGCCCGACCACCTGCTGCCTCCGCT...GATGTGGATATCCAGAGCGAGCGCTTCAGGGCCTTGGGCAGTGCCCGCTTCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp AGTGAGCAGTTGAGCAACAGGTCGAGGCCCAGGGCTGGCTCAAATCCCCCGTGCCAGCGTCACCCAGTCTaGGGGCAGCGGGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SEQLSNRSRPRAGSNPPCQRHPV*GQRGAQ
Trigger: CTGGGCACCCCGCTGCCCCCAGACTGGGTGACGCTG...GCACGGGGGATTTGAGCCAGCCCTGGGCCTCGACCTGTTGCTCAACTGCTCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACCAGCCCAGGCTGAAGTaGCTACCACGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHQPRLK*LPRSMA
Trigger: GGCCATGGAGCGTGGTAGCCACTTCAGCCTGGGCTG...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCATGGCCAAGAAAAGGCGCAGCAGCGCAGCCCGCGAGATGCCGCTACGCACCCCAGCCCAGGCTGAAGTaGCTACCACGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: PWPRKGAAAQPARCRYAPQPRLK*LPRSMA
Trigger: GGCCATGGAGCGTGGTAGCCACTTCAGCCTGGGCTG...GGGTGCGTAGCGGCATCTCGCGGGCTGCGCTGCTGCGCCTTTTCTTGGCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp GCTGGTTCACTGCTCCGGCCAGCGCGTTGCCCGAGCCGCAGGGGAGGATGCCCAGTCAGGGGTGATCTCTaGTCCTGCTGCTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AGSLLRPARCPSRRGGCPVRGDL*SCCSSA
Trigger: AGCAGAGGAGCAGCAGGACCAGAGATCACCCCTGAC...TGGGCATCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAGCAGTGAACCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp CGAAGGCCATGGCCCAGGCCCACCACAGCCGTGGGGCCACCTCCAGGCGACTCCCGCTCGGGATACAGCTaGGAAGCAGGCAGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: RRPWPRPTTAVGPPPGDSRSGYS*EAGRQK
Trigger: TTTTTGCCTGCCTGCTTCCCAGCTGTATCCCGAGCG...GGAGTCGCCTGGAGGTGGCCCCACGGCTGTGGTGGGCCTGGGCCATGGCCTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
3UTR CAA 72 bp GGGCGGCCCCAGATCAGACGCCAGGCCCCGCCCTCATaGATCAGGCACTACCCTCGGGACGAGCCCATTTCT +
Preference number: 4 (lower is better)
Translates to: GRPQIRRQAPPS*IRHYPRDEPIS
Trigger: AGAAATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATCTGGGGCCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTCTCGGAGCAGACAGGTaGGGGCAGTGGCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGLGADR*GQWPSA
Trigger: AGCGCTGGGCCACTGCCCTCACCTGTCTGCTCCGAG...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp ACTGAGTGCCTCCCATGCCAGGCAGAGTTCTGGGCGCTCGGGATACAGCTGGGACTCGGAGCAGACAGGTaGGGGCAGTGGCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: TECLPCQAEFWALGIQLGLGADR*GQWPSA
Trigger: AGCGCTGGGCCACTGCCCTCACCTGTCTGCTCCGAG...TCCCAGCTGTATCCCGAGCGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR TCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACACGTCTCCCGAGACCGTaGCGATGCCATCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATRLPRP*RCHPTH
Trigger: GTGAGTGGGATGGCATCGTCACGGTCTCGGGAGACG...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp CTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGAGCAACAGTGAGCAGTTaGGCAACAGGTCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LNGGTGVDGARLRALTGRATVSS*ATGRGP
Trigger: TGGGCCTCGACCTGTTGCTCAACTGCTCACTGTTGC...TCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GGCTCAAATCCCCCGTGCTGGTTCACTGCTCCGGCCAGCGCGTTGCCCGAGCCGGCAACAGTGAGCAGTTaGGCAACAGGTCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GSNPPCWFTAPASALPEPATVSS*ATGRGP
Trigger: TGGGCCTCGACCTGTTGCTCAACTGCTCACTGTTGC...CGGCTCGGGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGGGGATTTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR TCA 90 bp CTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACCGGCACAGCAACAGTaGGCAGTTGAGCAACAGGTC +
Preference number: 4 (lower is better)
Translates to: LNGGTGVDGARLRALTGRPAQQQ*AVEQQV
Trigger: GACCTGTTGCTCAACTGCTCACTGTTGCTGTGCCGG...TCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GGCTCAAATCCCCCGTGCTGGTTCACTGCTCCGGCCAGCGCGTTGCCCGAGCCGCTGGATATCCACATCTaGCACGAAGCCCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GSNPPCWFTAPASALPEPLDIHI*HEAPGH
Trigger: GTGGCCTGGGGCTTCGTGTCAGATGTGGATATCCAG...CGGCTCGGGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGGGGATTTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR TCA 90 bp AGAAACAGCGGGAGCCCGAGGCCAGCGTCACGGAGAGCAGGTCCAGTGGGTGGCCACTGCCCAAGGCCCTaGAGCGCTCGCTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: RNSGSPRPASRRAGPVGGHCPRP*SARSGY
Trigger: ATATCCAGAGCGAGCGCTTCAGGGCCTTGGGCAGTG...GCCACCCACTGGACCTGCTCTCCGTGACGCTGGCCTCGGGCTCCCGCTGTTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR TCA 90 bp CTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGAGCGAGATGGCCAACATaGGCACAAAGTCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LNGGTGVDGARLRALTGRARWPT*AQSPPP
Trigger: TGGAGGGGGACTTTGTGCTCATGTTGGCCATCTCGC...TCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGCGGACAGCCCAGGCTaGAGTGGCTACCACGCTCCA +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQADSPG*SGYHAP
Trigger: TGGAGCGTGGTAGCCACTTCAGCCTGGGCTGTCCGC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTTGCGGCTTCGCAGGGTaGAGCAGCCTGAGACCTCGG +
Preference number: 4 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPICGFAG*SSLRPR
Trigger: CCGAGGTCTCAGGCTGCTGCACCCTGCGAAGCCGCA...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAATGCGGCTTCGCAGGGTaGAGCAGCCTGAGACCTCGG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQCGFAG*SSLRPR
Trigger: CCGAGGTCTCAGGCTGCTGCACCCTGCGAAGCCGCA...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGCTGAGTCTGAGGGGCTaGGGCTTCGCAGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQLSLRG*GFAGCS
Trigger: GCTGCACCCTGCGAAGCCGCAGCCCCTCAGACTCAG...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTGAGTCTGAGGGGCTaGGGCTTCGCAGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQLSLRG*GFAGCS
Trigger: GCTGCACCCTGCGAAGCCGCAGCCCCTCAGACTCAG...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTCATCTGCCCGGAAGGTaGGAGTGGCTCTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGHLPGR*EWLCAG
Trigger: CCCGGCGCAGAGCCACTCGCACCTTCCGGGCAGATG...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp CCGGCCGACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGTGGCGGCCCCATCTaGCCGGAAGGTGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: PADSLRPTPASTFQVLSLGGGPI*PEGASG
Trigger: GCCACTCGCACCTTCCGGGCAGATGGGGCCGCCACC...CAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAGCCGCAGGGGAGGATaGCCACAGGCATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHSRRGG*PQASSQ
Trigger: CTGTGAAGATGCCTGTGGGCATCCTCCCCTGCGGCT...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACCTCCGGCCAGCGCGTTaGCCGAGCCGCAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDLRPAR*PSRRGG
Trigger: TCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAG...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAGGCTCAAATCCCCCGTaGTGGTTCACTGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATGSNPP*WFTAPA
Trigger: GGCCGGAGCAGTGAACCAGCACGGGGGATTTGAGCC...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACATCGTCGAAGCGCGCATaGGGAGCTGCCACCAGGTCA +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATSSKRA*GAATRS
Trigger: TGACCTGGTGGCAGCTCCGCATGCGCGCTTCGACGA...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp AGTGAGCAGTTGAGCAACAGGTCGAGGCCCAGGGCTGGCTCAAATCCCCCGTGCGCGCAGCCCGCGAGATaGCGCTACGCACCCAGCACA +
Preference number: 4 (lower is better)
Translates to: SEQLSNRSRPRAGSNPPCAQPAR*RYAPST
Trigger: TGTGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGC...GCACGGGGGATTTGAGCCAGCCCTGGGCCTCGACCTGTTGCTCAACTGCTCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR GCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAGGCCCATACTCCACCTaGTCCCCGTCCACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATGPYST*SPSTVS
Trigger: GCTCACAGTGGACGGGGAGCAGGTGGAGTATGGGCC...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACGGCCCATACTCCACCTaGTCCCCGTCCACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNGPYST*SPSTVS
Trigger: GCTCACAGTGGACGGGGAGCAGGTGGAGTATGGGCC...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGGAGCCAAACTCGCCATaGAGGAGCGGGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGAEPNSP*RSGVLA
Trigger: TGCCAGCACCCCGCTCCTCCATGGCGAGTTTGGCTC...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAGAGCCAAACTCGCCATaGAGGAGCGGGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATEPNSP*RSGVLA
Trigger: TGCCAGCACCCCGCTCCTCCATGGCGAGTTTGGCTC...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCGGTTCTCTTCGTAGGTaGCGGCCCCATCTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRAGSLRR*RPHLPG
Trigger: TCCGGGCAGATGGGGCCGCCACCTACGAAGAGAACC...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAGGTTCTCTTCGTAGGTaGCGGCCCCATCTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATGSLRR*RPHLPG
Trigger: TCCGGGCAGATGGGGCCGCCACCTACGAAGAGAACC...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACCCATCCCCGGGCAGTaGCAGTCCTCGGAGCAGACA +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQPIPGQ*QSSEQT
Trigger: TGTCTGCTCCGAGGACTGCCACTGCCCGGGGATGGG...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACACCAGCTCCCGGGCGTaGTTCTGTCGTTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDTSSRA*FCRSVW
Trigger: CCAGACAGAACGACAGAACCACGCCCGGGAGCTGGT...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCCGTTCAGCACCTCATaGAGCAGCCCGTCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRAPFSTS*SSPSPE
Trigger: CTCGGGAGACGGGCTGCTCCATGAGGTGCTGAACGG...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACCCGTTCAGCACCTCATaGAGCAGCCCGTCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNPFSTS*SSPSPE
Trigger: CTCGGGAGACGGGCTGCTCCATGAGGTGCTGAACGG...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGTCGAGGCCCAGGGCTaGCTCAAATCCCCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQVEAQG*LKSPVL
Trigger: CAGCACGGGGGATTTGAGCCAGCCCTGGGCCTCGAC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGGTAGGTGTGCAGTGTaGCGAGGCCCAGCACCGTGC +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQGRCAV*RGPAPC
Trigger: GCACGGTGCTGGGCCTCGCCACACTGCACACCTACC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCAGGTTCCACAGTaGCGGGGAGGTAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGARQVPQ*RGGRRG
Trigger: GCCTCTCCTACCTCCCCGCCACTGTGGAACCTGCCT...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACAGGCAGGTTCCACAGTaGCGGGGAGGTAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNRQVPQ*RGGRRG
Trigger: GCCTCTCCTACCTCCCCGCCACTGTGGAACCTGCCT...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCAGGCAGGTTCCACAGTaGCGGGGAGGTAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRARQVPQ*RGGRRG
Trigger: GCCTCTCCTACCTCCCCGCCACTGTGGAACCTGCCT...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGGCTATGGGCAGGGGTaGGCGAGGCAGGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQGYGQG*ARQVPQ
Trigger: CTGTGGAACCTGCCTCGCCCACCCCTGCCCATAGCC...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGGCTATGGGCAGGGGTaGGCGAGGCAGGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQGYGQG*ARQVPQ
Trigger: CTGTGGAACCTGCCTCGCCCACCCCTGCCCATAGCC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTTGGGAGCCCAGAGGATaGGGGAATTACGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPIWEPRG*GNYGGP
Trigger: GGGGCCCCCGTAATTCCCCCATCCTCTGGGCTCCCA...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAATGGGAGCCCAGAGGATaGGGGAATTACGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQWEPRG*GNYGGP
Trigger: GGGGCCCCCGTAATTCCCCCATCCTCTGGGCTCCCA...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACAGGTCAGCGCCTAGGTaGCTGGGCGAGATGGCCAAC +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNRSAPR*LGEMAN
Trigger: GTTGGCCATCTCGCCCAGCCACCTAGGCGCTGACCT...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCAGGTCAGCGCCTAGGTaGCTGGGCGAGATGGCCAAC +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRARSAPR*LGEMAN
Trigger: GTTGGCCATCTCGCCCAGCCACCTAGGCGCTGACCT...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACACAGCCCAGGCTGAAGTaGCTACCACGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATQPRLK*LPRSMA
Trigger: GGCCATGGAGCGTGGTAGCCACTTCAGCCTGGGCTG...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACCAGCCCAGGCTGAAGTaGCTACCACGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNQPRLK*LPRSMA
Trigger: GGCCATGGAGCGTGGTAGCCACTTCAGCCTGGGCTG...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCCGGGTAGGAGCAGGTaGCAAGCGTCAGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRAPGRSR*QASGLS
Trigger: GCTCAGTCCTGACGCTTGCCACCTGCTCCTACCCGG...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGAGGAACCTGCCCCTCCTaGGCTGATTGGCCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: LNGGTGVDGARLRALTGRGTCPS*ADWPAK
Trigger: TTTAGCTGGCCAATCAGCCCAGGAGGGGCAGGTTCC...TCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp AGCGTCAGGACTGAGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCGGAACCTGCCCCTCCTaGGCTGATTGGCCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: SVRTEPCPVRAAPDQTPGGTCPS*ADWPAK
Trigger: TTTAGCTGGCCAATCAGCCCAGGAGGGGCAGGTTCC...GCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAATCGAGAACACGGCCTaGGTAGGGCCAGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATIENTA*VGPERP
Trigger: GGGCCTCTCTGGCCCTACCCAGGCCGTGTTCTCGAT...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGGTCAGCTCCTGGTCTaGCCTCTGGGTGTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQGQLLV*PLGVWP
Trigger: CGGCCAGACACCCAGAGGCCAGACCAGGAGCTGACC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599748.5
CDS-3UTR TCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTGACCCCCAAAGGGATTaGCCAATAGAAGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTDPQRD*PIEATG
Trigger: CCCGGTTGCTTCTATTGGTCAATCCCTTTGGGGGTC...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACGTCTCCCGAGACCGTaGCGATGCCATCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQRLPRP*RCHPTH
Trigger: GTGAGTGGGATGGCATCGTCACGGTCTCGGGAGACG...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACCCGGCACAGCAACAGTaGGCAGTTGAGCAACAGGTC +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHPAQQQ*AVEQQV
Trigger: GACCTGTTGCTCAACTGCTCACTGTTGCTGTGCCGG...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGCACTGCCCAAGGCCCTaGAGCGCTCGCTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGAHCPRP*SARSGY
Trigger: ATATCCAGAGCGAGCGCTTCAGGGCCTTGGGCAGTG...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACACACTGCCCAAGGCCCTaGAGCGCTCGCTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATHCPRP*SARSGY
Trigger: ATATCCAGAGCGAGCGCTTCAGGGCCTTGGGCAGTG...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp CCGGCCGACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGAGAACGATGCAGGGGTaGGTGGGCCATGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: PADSLRPTPASTFQVLSLRTMQG*VGHGRG
Trigger: GCCCCGCCCATGGCCCACTCACCCCTGCATCGTTCT...CAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp CCATGGCCAAGAAAAGGCGCAGCAGCGCAGCCCGCGAGATGCCGCTACGCACCCGCGAGATGGCCAACATaGGCACAAAGTCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PWPRKGAAAQPARCRYAPARWPT*AQSPPP
Trigger: TGGAGGGGGACTTTGTGCTCATGTTGGCCATCTCGC...GGGTGCGTAGCGGCATCTCGCGGGCTGCGCTGCTGCGCCTTTTCTTGGCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR TCA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTAGCCAGGAGGCCCAGTaGGCAGTGTACCGATGCCAG +
Preference number: 4 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPISQEAQ*AVYRCQ
Trigger: CTGGCATCGGTACACTGCTCACTGGGCCTCCTGGCT...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAAGCCAGGAGGCCCAGTaGGCAGTGTACCGATGCCAG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQSQEAQ*AVYRCQ
Trigger: CTGGCATCGGTACACTGCTCACTGGGCCTCCTGGCT...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTAGGCCCCGCCCTCATTaGTCAGGCACTACCCTCGGG +
Preference number: 4 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGRPRPH*SGTTLG
Trigger: CCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCT...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGACCGGCCGACTCACTaGGGCCTACCCCAGCCAGTA +
Preference number: 4 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGDRPTH*GLPQPV
Trigger: TACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGGTC...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp TTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCATGAAAGCGAGCGAGGCTGCGGGCCCTaGCCGGCCGACTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: LTVTTPTFQHHVWSHESERGCGP*PADSLR
Trigger: CCTCAGTGAGTCGGCCGGTCAGGGCCCGCAGCCTCG...CTCGCTTTCATGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACGTAGCAGGTCAGGGGTaGTCTCTGGTCCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNVAGQG*SLVLLL
Trigger: GAGCAGCAGGACCAGAGATCACCCCTGACCTGCTAC...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS-3UTR GCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTTGCGGCTTCGCAGGGTaGAGCAGCCTGAGACCTCGG +
Preference number: 4 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGCGFAG*SSLRPR
Trigger: CCGAGGTCTCAGGCTGCTGCACCCTGCGAAGCCGCA...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACGGTGGCGGCCCCATCTaGCCGGAAGGTGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDGGGPI*PEGASG
Trigger: GCCACTCGCACCTTCCGGGCAGATGGGGCCGCCACC...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGCCGCAGGGGAGGATaGCCACAGGCATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGASRRGG*PQASSQ
Trigger: CTGTGAAGATGCCTGTGGGCATCCTCCCCTGCGGCT...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAAGCCGCAGGGGAGGATaGCCACAGGCATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATSRRGG*PQASSQ
Trigger: CTGTGAAGATGCCTGTGGGCATCCTCCCCTGCGGCT...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGGCTCAAATCCCCCGTaGTGGTTCACTGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQGSNPP*WFTAPA
Trigger: GGCCGGAGCAGTGAACCAGCACGGGGGATTTGAGCC...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTTCGTCGAAGCGCGCATaGGGAGCTGCCACCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPISSKRA*GAATRS
Trigger: TGACCTGGTGGCAGCTCCGCATGCGCGCTTCGACGA...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCGCGCAGCCCGCGAGATaGCGCTACGCACCCAGCACA +
Preference number: 4 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTAQPAR*RYAPST
Trigger: TGTGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGC...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp CTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCGTACCGATGCCAGGGTaGATCTGTGCCTGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: LIGQLNGGTGVDGARLRAVPMPG*ICACSG
Trigger: GCCGCTACAGGCACAGATGCACCCTGGCATCGGTAC...GGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCGTACCGATGCCAGGGTaGATCTGTGCCTGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRAVPMPG*ICACSG
Trigger: GCCGCTACAGGCACAGATGCACCCTGGCATCGGTAC...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAGTACCGATGCCAGGGTaGATCTGTGCCTGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATVPMPG*ICACSG
Trigger: GCCGCTACAGGCACAGATGCACCCTGGCATCGGTAC...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCCGGGGCCAGGGCCCCTaGCACCACAACTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTRGQGP*HHNSSS
Trigger: GCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCG...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGCTGCGCCTACGAAGTaGAGCGCGAGATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQAAPTK*SARSGS
Trigger: GCTCCCTGATCTCGCGCTGCACTTCGTAGGCGCAGC...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598088.5
CDS-3UTR CCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACACGGGACCCTGGCCCTaGGTCTTAAGCCATAGTAGG +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHTGPWP*VLSHSR
Trigger: CCTACTATGGCTTAAGACCCAGGGCCAGGGTCCCGT...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
CDS-3UTR CCA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGGCAGCCAGTGGCGGTaGGGGCGGGGCCATGGCCTT +
Preference number: 4 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPGSQWR*GRGHGL
Trigger: AAGGCCATGGCCCCGCCCCCACCGCCACTGGCTGCC...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCACCTCCAGGCGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCTGGAGGAGCGGGGTGCTaGCAGCCAGTGGCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PPPGDSLRGQVPGHLSFAGGAGC*QPVAVG
Trigger: CCCCACCGCCACTGGCTGCCAGCACCCCGCTCCTCC...AGCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCGCCTGGAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCGCCTGGCTTCAGGTTTaGGGCGCAGCCGCTGTATGT +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRAAWLQV*GAAAVC
Trigger: ACATACAGCGGCTGCGCCCCAAACCTGAAGCCAGGC...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAGCCTGGCTTCAGGTTTaGGGCGCAGCCGCTGTATGT +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATAWLQV*GAAAVC
Trigger: ACATACAGCGGCTGCGCCCCAAACCTGAAGCCAGGC...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGGTTCTCTTCGTAGGTaGCGGCCCCATCTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQGSLRR*RPHLPG
Trigger: TCCGGGCAGATGGGGCCGCCACCTACGAAGAGAACC...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCGCAGTGGCCCAGCGCTaGGCCTCGGCACGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTAVAQR*ASARFS
Trigger: AGAGAACCGTGCCGAGGCCCAGCGCTGGGCCACTGC...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACACCAGCTCCCGGGCGTaGTTCTGTCGTTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNTSSRA*FCRSVW
Trigger: CCAGACAGAACGACAGAACCACGCCCGGGAGCTGGT...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GCCACCTCCAGGCGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCCTCAGGCTCAGCCCCTaGACCAGCTCCCGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ATSRRLLTGPGSWSSFICLRLSP*TSSRAW
Trigger: CCACGCCCGGGAGCTGGTCCAGGGGCTGAGCCTGAG...GCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCGCCTGGAGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGTCAAATCCCCCGTGCTaGTTCACTGCTCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGASNPPC*FTAPAS
Trigger: GCTGGCCGGAGCAGTGAACCAGCACGGGGGATTTGA...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAAGGCAGGTTCCACAGTaGCGGGGAGGTAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQRQVPQ*RGGRRG
Trigger: GCCTCTCCTACCTCCCCGCCACTGTGGAACCTGCCT...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp TCCAGCATCACGTCTGGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGCACGAGGCAGGCTATaGGCAGGGGTGGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: SSITSGPMKASAILRRGQARGRL*AGVGEA
Trigger: TGCCTCGCCCACCCCTGCCCATAGCCTGCCTCGTGC...CTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GAAGAGGCAGGTCAGACACAGAACGATGCAGGGGTGAGTGGGCCATGGGCGGGGGGGTCAGCTCCGACTTaGCACGAGGCAGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: EEAGQTQNDAGVSGPWAGGSAPT*HEAGYG
Trigger: CCCATAGCCTGCCTCGTGCCAAGTCGGAGCTGACCC...CCCCGCCCATGGCCCACTCACCCCTGCATCGTTCTGTGTCTGACCTGCCTCTTC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGGGTCAGCTCCGACTTaGCACGAGGCAGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQGSAPT*HEAGYG
Trigger: CCCATAGCCTGCCTCGTGCCAAGTCGGAGCTGACCC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCGTCCCCAGCCAGCTCTaGGCCCCCACCGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTVPSQL*APTVEG
Trigger: TCCCTCAACGGTGGGGGCCCAGAGCTGGCTGGGGAC...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GGTAGGAGAGGCGTCCGCGGTAGGTGTGCAGTGTGGCGAGGCCCAGCACCGTGCAGTGTAGAGCTGCCTTaGGAGAGCCAGGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GRRGVRGRCAVWRGPAPCSVELP*ESQEVK
Trigger: CTTCACCTCCTGGCTCTCCCAAGGCAGCTCTACACT...GCACGGTGCTGGGCCTCGCCACACTGCACACCTACCGCGGACGCCTCTCCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTTGGGAGCCCAGAGGATaGGGGAATTACGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGWEPRG*GNYGGP
Trigger: GGGGCCCCCGTAATTCCCCCATCCTCTGGGCTCCCA...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCGGCCGACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGCCCGGGCATCAGGGGTaGGAAGTGGGAGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PADSLRPTPASTFQVLSLPGHQG*EVGAQR
Trigger: CCTCTGGGCTCCCACTTCCCACCCCTGATGCCCGGG...CAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGCCGGGTAGGAGCAGGTaGCAAGCGTCAGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQPGRSR*QASGLS
Trigger: GCTCAGTCCTGACGCTTGCCACCTGCTCCTACCCGG...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp AGCGTCAGGACTGAGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCGATTGGCCAGCTAAATaGAGGCACCGGAGTGGATGG +
Preference number: 4 (lower is better)
Translates to: SVRTEPCPVRAAPDQTPGDWPAK*RHRSGW
Trigger: CCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATC...GCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTGATTGGCCAGCTAAATaGAGGCACCGGAGTGGATGG +
Preference number: 4 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTDWPAK*RHRSGW
Trigger: CCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATC...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
3UTR CAA 72 bp GGGTGGCCACCACCCCGGCACAGCAACAGTGAGCAGTaGAGCAACAGGTCGAGGCCCAGGGCTGGCTCAAAT +
Preference number: 4 (lower is better)
Translates to: GWPPPRHSNSEQ*SNRSRPRAGSN
Trigger: ATTTGAGCCAGCCCTGGGCCTCGACCTGTTGCTCAACTGCTCACTGTTGCTGTGCCGGGGTGGTGGCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR TCA 90 bp AGCTGGGAAGCAGGCAGGCAAAAATGTCCAGGAGCTGGGGGTGAGCATCCCACACAGGGTGCAGCAGCCTaGGACCTCGGCCAACGGGAC +
Preference number: 4 (lower is better)
Translates to: SWEAGRQKCPGAGGEHPTQGAAA*DLGQRD
Trigger: GTCCCGTTGGCCGAGGTCTCAGGCTGCTGCACCCTG...TGTGGGATGCTCACCCCCAGCTCCTGGACATTTTTGCCTGCCTGCTTCCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR TCA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACGACCCCCAAAGGGATTaGCCAATAGAAGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDDPQRD*PIEATG
Trigger: CCCGGTTGCTTCTATTGGTCAATCCCTTTGGGGGTC...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACGACCCCCAAAGGGATTaGCCAATAGAAGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHDPQRD*PIEATG
Trigger: CCCGGTTGCTTCTATTGGTCAATCCCTTTGGGGGTC...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAGCAACAGTGAGCAGTTaGGCAACAGGTCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATATVSS*ATGRGP
Trigger: TGGGCCTCGACCTGTTGCTCAACTGCTCACTGTTGC...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGCCGGCACAGCAACAGTaGGCAGTTGAGCAACAGGTC +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGAPAQQQ*AVEQQV
Trigger: GACCTGTTGCTCAACTGCTCACTGTTGCTGTGCCGG...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACCCGGCACAGCAACAGTaGGCAGTTGAGCAACAGGTC +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNPAQQQ*AVEQQV
Trigger: GACCTGTTGCTCAACTGCTCACTGTTGCTGTGCCGG...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCTGGATATCCACATCTaGCACGAAGCCCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRALDIHI*HEAPGH
Trigger: GTGGCCTGGGGCTTCGTGTCAGATGTGGATATCCAG...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACACTGGATATCCACATCTaGCACGAAGCCCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATLDIHI*HEAPGH
Trigger: GTGGCCTGGGGCTTCGTGTCAGATGTGGATATCCAG...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGCACTGCCCAAGGCCCTaGAGCGCTCGCTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQHCPRP*SARSGY
Trigger: ATATCCAGAGCGAGCGCTTCAGGGCCTTGGGCAGTG...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCGCGAGATGGCCAACATaGGCACAAAGTCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRAARWPT*AQSPPP
Trigger: TGGAGGGGGACTTTGTGCTCATGTTGGCCATCTCGC...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACGCGAGATGGCCAACATaGGCACAAAGTCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNARWPT*AQSPPP
Trigger: TGGAGGGGGACTTTGTGCTCATGTTGGCCATCTCGC...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp GGAATTACGGGGGCCCCTTCGGAGACGGGTGAGTGTAGAGCTGCCTTGGGAGAGAGCCAGGAGGCCCAGTaGGCAGTGTACCGATGCCAG +
Preference number: 4 (lower is better)
Translates to: GITGAPSETGECRAALGESQEAQ*AVYRCQ
Trigger: CTGGCATCGGTACACTGCTCACTGGGCCTCCTGGCT...CTCTCCCAAGGCAGCTCTACACTCACCCGTCTCCGAAGGGGCCCCCGTAATTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR TCA 90 bp TCCAGCATCACGTCTGGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGAGGCCCCGCCCTCATTaGTCAGGCACTACCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SSITSGPMKASAILRRGQRPRPH*SGTTLG
Trigger: CCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCT...CTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGGTGGCGGCCCCATCTaGCCGGAAGGTGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPGGGPI*PEGASG
Trigger: GCCACTCGCACCTTCCGGGCAGATGGGGCCGCCACC...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACCCCGTGCTGGTTCACTaGTCCGGCCAGCGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDPVLVH*SGQRVA
Trigger: GGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGG...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp TCCAGCATCACGTCTGGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGCGCACCCAGCACAGGTaGACCAGGCCGTCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: SSITSGPMKASAILRRGQRTQHR*TRPSSK
Trigger: CTTCGACGACGGCCTGGTGCACCTGTGCTGGGTGCG...CTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGCAGCCCGCGAGATaGCGCTACGCACCCAGCACA +
Preference number: 4 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDAQPAR*RYAPST
Trigger: TGTGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGC...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGTACCGATGCCAGGGTaGATCTGTGCCTGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQVPMPG*ICACSG
Trigger: GCCGCTACAGGCACAGATGCACCCTGGCATCGGTAC...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAATGCAGGGCCTGGTCCTaGTGCTCCTCTGCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQCRAWS*CSSASR
Trigger: CCTTGAAGCAGAGGAGCAGCAGGACCAGGCCCTGCA...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600537.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAACGGGACCCTGGCCCTaGGTCTTAAGCCATAGTAGG +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATTGPWP*VLSHSR
Trigger: CCTACTATGGCTTAAGACCCAGGGCCAGGGTCCCGT...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTGGGCCTCGGGCTaGGTAGGAGCCAAACTCGCC +
Preference number: 4 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDAWASG*VGAKLA
Trigger: GGCGAGTTTGGCTCCTACCCAGCCCGAGGCCCACGC...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TCCAGCATCACGTCTGGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGTGAGGGCAAAGCGTaGGCCTCGGGCTGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: SSITSGPMKASAILRRGQGEGKA*ASGWVG
Trigger: TCCTACCCAGCCCGAGGCCCACGCTTTGCCCTCACC...CTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGCCTGGCTTCAGGTTTaGGGCGCAGCCGCTGTATGT +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQAWLQV*GAAAVC
Trigger: ACATACAGCGGCTGCGCCCCAAACCTGAAGCCAGGC...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGTTCTCTTCGTAGGTaGCGGCCCCATCTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGGSLRR*RPHLPG
Trigger: TCCGGGCAGATGGGGCCGCCACCTACGAAGAGAACC...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TCCAGCATCACGTCTGGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGCCCATCCCCGGGCAGTaGCAGTCCTCGGAGCAGACA +
Preference number: 4 (lower is better)
Translates to: SSITSGPMKASAILRRGQPIPGQ*QSSEQT
Trigger: TGTCTGCTCCGAGGACTGCCACTGCCCGGGGATGGG...CTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CAGCGCAGCCCGCGAGATGCCGCTACGCACCCAGCACAGGTGCACCAGGCCGTCATCATGGGAAGCACGTaGTTCTTACACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: QRSPRDAATHPAQVHQAVIMGST*FLHHCQ
Trigger: CTGGCAGTGGTGTAAGAACCACGTGCTTCCCATGAT...GACGGCCTGGTGCACCTGTGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp GCCCAGGCCCACCACAGCCGTGGGGCCACCTCCAGGCGACTCCTTACGGGGCCACAGCTTCAGAGATCATaGGAAGCACGTGGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: AQAHHSRGATSRRLLTGPQLQRS*EARGSY
Trigger: GTAAGAACCACGTGCTTCCCATGATCTCTGAAGCTG...TGGCCCCGTAAGGAGTCGCCTGGAGGTGGCCCCACGGCTGTGGTGGGCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCACTCAGGCTCAGCCCCTaGACCAGCTCCCGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPLRLSP*TSSRAW
Trigger: CCACGCCCGGGAGCTGGTCCAGGGGCTGAGCCTGAG...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAATCAAATCCCCCGTGCTaGTTCACTGCTCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQSNPPC*FTAPAS
Trigger: GCTGGCCGGAGCAGTGAACCAGCACGGGGGATTTGA...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCGTCGAGGCCCAGGGCTaGCTCAAATCCCCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTVEAQG*LKSPVL
Trigger: CAGCACGGGGGATTTGAGCCAGCCCTGGGCCTCGAC...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACAGCAGGTCCAGTGGGTaGCCACCACCCCGGCACAGC +
Preference number: 4 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDSRSSG*PPPRHS
Trigger: GCTGTGCCGGGGTGGTGGCCACCCACTGGACCTGCT...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TGGTTCACTGCTCCGGCCAGCGCGTTGCCCGAGCCGCAGGGGAGGATGCCCACACTGAAGCGCTCGCTCTaGATATCCACATCTGACACG +
Preference number: 4 (lower is better)
Translates to: WFTAPASALPEPQGRMPTLKRSL*ISTSDT
Trigger: CGTGTCAGATGTGGATATCCAGAGCGAGCGCTTCAG...TGTGGGCATCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAGCAGTGAACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCGGTAGGTGTGCAGTGTaGCGAGGCCCAGCACCGTGC +
Preference number: 4 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTGRCAV*RGPAPC
Trigger: GCACGGTGCTGGGCCTCGCCACACTGCACACCTACC...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GGAATTACGGGGGCCCCTTCGGAGACGGGTGAGTGTAGAGCTGCCTTGGGAGAGAGGCAGGTTCCACAGTaGCGGGGAGGTAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GITGAPSETGECRAALGERQVPQ*RGGRRG
Trigger: GCCTCTCCTACCTCCCCGCCACTGTGGAACCTGCCT...CTCTCCCAAGGCAGCTCTACACTCACCCGTCTCCGAAGGGGCCCCCGTAATTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp GCACTGCCCAAGGCCCTGAAGCGCTCGCTCTGGATATCCACATCTGACACGAAGCCCGGGCATCAGGGGTaGGAAGTGGGAGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ALPKALKRSLWISTSDTKPGHQG*EVGAQR
Trigger: CCTCTGGGCTCCCACTTCCCACCCCTGATGCCCGGG...CTTCGTGTCAGATGTGGATATCCAGAGCGAGCGCTTCAGGGCCTTGGGCAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAGGCTACCACGCTCCATaGCCAAGAAAAGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATGYHAP*PRKGAA
Trigger: TGCTGCGCCTTTTCTTGGCCATGGAGCGTGGTAGCC...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCGGCTACCACGCTCCATaGCCAAGAAAAGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRAGYHAP*PRKGAA
Trigger: TGCTGCGCCTTTTCTTGGCCATGGAGCGTGGTAGCC...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TCCAGCATCACGTCTGGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGAGGCCCCCGACGTGCTaGCCCTTCCCTCTTGGACGT +
Preference number: 4 (lower is better)
Translates to: SSITSGPMKASAILRRGQRPPTC*PFPLGR
Trigger: ACGTCCAAGAGGGAAGGGCCAGCACGTCGGGGGCCT...CTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS-3UTR CCA 90 bp CTCCAGGCGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCTCCCTGGCCCACCACAGCCGTaGGGCCACCTCCAGGCGACT +
Preference number: 4 (lower is better)
Translates to: LQATPYGARFLVIFHLLPGPPQP*GHLQAT
Trigger: AGTCGCCTGGAGGTGGCCCCACGGCTGTGGTGGGCC...AGGGAGCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCGCCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp GAAGCAGGCAGGCAAAAATGTCCAGGAGCTGGGGGTGAGCATCCCACAGGCAGGAGACCACGAAGGCCATaGCCCAGGCCCACCACAGCC +
Preference number: 4 (lower is better)
Translates to: EAGRQKCPGAGGEHPTGRRPRRP*PRPTTA
Trigger: GGCTGTGGTGGGCCTGGGCCATGGCCTTCGTGGTCT...CCTGCCTGTGGGATGCTCACCCCCAGCTCCTGGACATTTTTGCCTGCCTGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACATGTATGTGCAGGGCCTaGTCCTGCTGCTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATCMCRA*SCCSSA
Trigger: AGCAGAGGAGCAGCAGGACCAGGCCCTGCACATACA...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600537.5
CDS-3UTR TCA 90 bp GACTTGGCACGAGGCAGGCTATGGGCAGGGGTGGGCGAGGCAGGTTCCACAGTGGACCCCCAAAGGGATTaGCCAATAGAAGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: DLARGRLWAGVGEAGSTVDPQRD*PIEATG
Trigger: CCCGGTTGCTTCTATTGGTCAATCCCTTTGGGGGTC...CACTGTGGAACCTGCCTCGCCCACCCCTGCCCATAGCCTGCCTCGTGCCAAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR TCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAGACCCCCAAAGGGATTaGCCAATAGAAGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATDPQRD*PIEATG
Trigger: CCCGGTTGCTTCTATTGGTCAATCCCTTTGGGGGTC...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp CCGTTCAGCACCTCATGGAGCAGCCCGTCTCCCGAGACCGTGACGATGCCATCCCCGGCACAGCAACAGTaGGCAGTTGAGCAACAGGTC +
Preference number: 4 (lower is better)
Translates to: PFSTSWSSPSPETVTMPSPAQQQ*AVEQQV
Trigger: GACCTGTTGCTCAACTGCTCACTGTTGCTGTGCCGG...GGATGGCATCGTCACGGTCTCGGGAGACGGGCTGCTCCATGAGGTGCTGAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR TCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTGGATATCCACATCTaGCACGAAGCCCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQLDIHI*HEAPGH
Trigger: GTGGCCTGGGGCTTCGTGTCAGATGTGGATATCCAG...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGCTGGATATCCACATCTaGCACGAAGCCCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQLDIHI*HEAPGH
Trigger: GTGGCCTGGGGCTTCGTGTCAGATGTGGATATCCAG...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp TTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCATGAAAGCGAGAGAACGATGCAGGGGTaGGTGGGCCATGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LTVTTPTFQHHVWSHESERTMQG*VGHGRG
Trigger: GCCCCGCCCATGGCCCACTCACCCCTGCATCGTTCT...CTCGCTTTCATGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACGACCGGCCGACTCACTaGGGCCTACCCCAGCCAGTA +
Preference number: 4 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDDRPTH*GLPQPV
Trigger: TACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGGTC...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACGAGGGTAGGTGTAGATaGAGAAGTAGGCCGCTGAGT +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHEGRCR*RSRPLS
Trigger: ACTCAGCGGCCTACTTCTGCATCTACACCTACCCTC...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACGAGGGTAGGTGTAGATaGAGAAGTAGGCCGCTGAGT +
Preference number: 4 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDEGRCR*RSRPLS
Trigger: ACTCAGCGGCCTACTTCTGCATCTACACCTACCCTC...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp CTCCAGGCGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCTCCCTCATCTGCCCGGAAGGTaGGAGTGGCTCTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: LQATPYGARFLVIFHLLPHLPGR*EWLCAG
Trigger: CCCGGCGCAGAGCCACTCGCACCTTCCGGGCAGATG...AGGGAGCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCGCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR GCA 90 bp TTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCATGAAAGCGAGCCCGTGCTGGTTCACTaGTCCGGCCAGCGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: LTVTTPTFQHHVWSHESEPVLVH*SGQRVA
Trigger: GGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGG...CTCGCTTTCATGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCGGCCCATACTCCACCTaGTCCCCGTCCACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTGPYST*SPSTVS
Trigger: GCTCACAGTGGACGGGGAGCAGGTGGAGTATGGGCC...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp AGTGAGCAGTTGAGCAACAGGTCGAGGCCCAGGGCTGGCTCAAATCCCCCGTGCGTACCGATGCCAGGGTaGATCTGTGCCTGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: SEQLSNRSRPRAGSNPPCVPMPG*ICACSG
Trigger: GCCGCTACAGGCACAGATGCACCCTGGCATCGGTAC...GCACGGGGGATTTGAGCCAGCCCTGGGCCTCGACCTGTTGCTCAACTGCTCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR GCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGCGTTGCGCTTGTTCCTaGGCTCTATGCTCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQRCACS*ALCSLP
Trigger: CGGCAGAGAGCATAGAGCGCAGGAACAAGCGCAACG...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS-3UTR GCA 90 bp TCCAGCATCACGTCTGGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGTTCCCAAGCAGCGGCTaGGCCTACGAAGTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: SSITSGPMKASAILRRGQFPSSG*AYEVQR
Trigger: GCGCTGCACTTCGTAGGCGCAGCCGCTGCTTGGGAA...CTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598088.5
CDS-3UTR CCA 90 bp TTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCATGAAAGCGAGTCAGCTCTCCAACACTaGGCCCGCCGGGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LTVTTPTFQHHVWSHESESALQH*ARRVLR
Trigger: CCGGAGGACCCGGCGGGCCCAGTGTTGGAGAGCTGA...CTCGCTTTCATGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245222.9
ENST00000340932.7
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAACATCAACGGGACCCTaGCCCTGGGTCTTAAGCCAT +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATTSTGP*PWVLSH
Trigger: ATGGCTTAAGACCCAGGGCCAGGGTCCCGTTGATGT...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000600537.5
CDS-3UTR CCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACACATCAACGGGACCCTaGCCCTGGGTCTTAAGCCAT +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNTSTGP*PWVLSH
Trigger: ATGGCTTAAGACCCAGGGCCAGGGTCCCGTTGATGT...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000600537.5
CDS-3UTR CCA 90 bp TTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCATGAAAGCGAGGCAGTGGCCCAGCGCTaGGCCTCGGCACGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LTVTTPTFQHHVWSHESEAVAQR*ASARFS
Trigger: AGAGAACCGTGCCGAGGCCCAGCGCTGGGCCACTGC...CTCGCTTTCATGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp AGTGAGCAGTTGAGCAACAGGTCGAGGCCCAGGGCTGGCTCAAATCCCCCGTGCACCAGCTCCCGGGCGTaGTTCTGTCGTTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SEQLSNRSRPRAGSNPPCTSSRA*FCRSVW
Trigger: CCAGACAGAACGACAGAACCACGCCCGGGAGCTGGT...GCACGGGGGATTTGAGCCAGCCCTGGGCCTCGACCTGTTGCTCAACTGCTCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp TCCAGCATCACGTCTGGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGCCGTTCAGCACCTCATaGAGCAGCCCGTCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: SSITSGPMKASAILRRGQPFSTS*SSPSPE
Trigger: CTCGGGAGACGGGCTGCTCCATGAGGTGCTGAACGG...CTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTTCAAATCCCCCGTGCTaGTTCACTGCTCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGSNPPC*FTAPAS
Trigger: GCTGGCCGGAGCAGTGAACCAGCACGGGGGATTTGA...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp AGTGAGCAGTTGAGCAACAGGTCGAGGCCCAGGGCTGGCTCAAATCCCCCGTGCTCAAATCCCCCGTGCTaGTTCACTGCTCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SEQLSNRSRPRAGSNPPCSNPPC*FTAPAS
Trigger: GCTGGCCGGAGCAGTGAACCAGCACGGGGGATTTGA...GCACGGGGGATTTGAGCCAGCCCTGGGCCTCGACCTGTTGCTCAACTGCTCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCGGGTCAGCTCCGACTTaGCACGAGGCAGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTGSAPT*HEAGYG
Trigger: CCCATAGCCTGCCTCGTGCCAAGTCGGAGCTGACCC...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACGATGGGCAGGGGTTCTaGCGAGCCAGGAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDDGQGF*RARRGQ
Trigger: CTGGCCTCTCCTGGCTCGCCAGAACCCCTGCCCATC...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAAGTGTAGAGCTGCCTTaGGAGAGCCAGGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATSVELP*ESQEVK
Trigger: CTTCACCTCCTGGCTCTCCCAAGGCAGCTCTACACT...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGTGTAGAGCTGCCTTaGGAGAGCCAGGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGASVELP*ESQEVK
Trigger: CTTCACCTCCTGGCTCTCCCAAGGCAGCTCTACACT...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GCACTGCCCAAGGCCCTGAAGCGCTCGCTCTGGATATCCACATCTGACACGAAGTGGGAGCCCAGAGGATaGGGGAATTACGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ALPKALKRSLWISTSDTKWEPRG*GNYGGP
Trigger: GGGGCCCCCGTAATTCCCCCATCCTCTGGGCTCCCA...CTTCGTGTCAGATGTGGATATCCAGAGCGAGCGCTTCAGGGCCTTGGGCAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp TTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCATGAAAGCGAGCCCGGGCATCAGGGGTaGGAAGTGGGAGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LTVTTPTFQHHVWSHESEPGHQG*EVGAQR
Trigger: CCTCTGGGCTCCCACTTCCCACCCCTGATGCCCGGG...CTCGCTTTCATGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCGGCCGACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGAGGTCAGCGCCTAGGTaGCTGGGCGAGATGGCCAAC +
Preference number: 4 (lower is better)
Translates to: PADSLRPTPASTFQVLSLRSAPR*LGEMAN
Trigger: GTTGGCCATCTCGCCCAGCCACCTAGGCGCTGACCT...CAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGGCTACCACGCTCCATaGCCAAGAAAAGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQGYHAP*PRKGAA
Trigger: TGCTGCGCCTTTTCTTGGCCATGGAGCGTGGTAGCC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp CCGGCCGACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGCAGCCCAGGCTGAAGTaGCTACCACGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: PADSLRPTPASTFQVLSLQPRLK*LPRSMA
Trigger: GGCCATGGAGCGTGGTAGCCACTTCAGCCTGGGCTG...CAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAATGGAGGCACCGGAGTaGATGGGGCGAGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPMEAPE*MGRGCG
Trigger: CCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCAT...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCGATTGGCCAGCTAAATaGAGGCACCGGAGTGGATGG +
Preference number: 4 (lower is better)
Translates to: LIGQLNGGTGVDGARLRADWPAK*RHRSGW
Trigger: CCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATC...GGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCGATTGGCCAGCTAAATaGAGGCACCGGAGTGGATGG +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRADWPAK*RHRSGW
Trigger: CCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATC...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGGAACCTGCCCCTCCTaGGCTGATTGGCCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQGTCPS*ADWPAK
Trigger: TTTAGCTGGCCAATCAGCCCAGGAGGGGCAGGTTCC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCACAGGGTGCAGCAGCCTaGGACCTCGGCCAACGGGAC +
Preference number: 4 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPQGAAA*DLGQRD
Trigger: GTCCCGTTGGCCGAGGTCTCAGGCTGCTGCACCCTG...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGACCCCCAAAGGGATTaGCCAATAGAAGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQDPQRD*PIEATG
Trigger: CCCGGTTGCTTCTATTGGTCAATCCCTTTGGGGGTC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR TCA 90 bp AGCTGGGAAGCAGGCAGGCAAAAATGTCCAGGAGCTGGGGGTGAGCATCCCACACGTCTCCCGAGACCGTaGCGATGCCATCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: SWEAGRQKCPGAGGEHPTRLPRP*RCHPTH
Trigger: GTGAGTGGGATGGCATCGTCACGGTCTCGGGAGACG...TGTGGGATGCTCACCCCCAGCTCCTGGACATTTTTGCCTGCCTGCTTCCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR TCA 90 bp CCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCAGAACGATGCAGGGGTaGGTGGGCCATGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: PVHSRSCHWATRKIDSALRTMQG*VGHGRG
Trigger: GCCCCGCCCATGGCCCACTCACCCCTGCATCGTTCT...GAGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAAGGCCCCGCCCTCATTaGTCAGGCACTACCCTCGGG +
Preference number: 4 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPRPRPH*SGTTLG
Trigger: CCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCT...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp CCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCGGCAAGCGTCAGGACTaGGCCCTGCCCCGTAAGGGC +
Preference number: 4 (lower is better)
Translates to: PVHSRSCHWATRKIDSALGKRQD*ALPRKG
Trigger: GCCCTTACGGGGCAGGGCTCAGTCCTGACGCTTGCC...GAGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp ACCTCCAGGCGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCTCCCTGAGTCTGAGGGGCTaGGGCTTCGCAGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TSRRLLTGPGSWSSFICSLSLRG*GFAGCS
Trigger: GCTGCACCCTGCGAAGCCGCAGCCCCTCAGACTCAG...GGAGCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCGCCTGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR GCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACGAGGGTAGGTGTAGATaGAGAAGTAGGCCGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNEGRCR*RSRPLS
Trigger: ACTCAGCGGCCTACTTCTGCATCTACACCTACCCTC...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCAGCCGCAGGGGAGGATaGCCACAGGCATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTSRRGG*PQASSQ
Trigger: CTGTGAAGATGCCTGTGGGCATCCTCCCCTGCGGCT...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTTCAGACACAGAACGATaGAGGGGTGAGTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPISDTER*RGEWAM
Trigger: CATGGCCCACTCACCCCTGCATCGTTCTGTGTCTGA...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAATCAGACACAGAACGATaGAGGGGTGAGTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQSDTER*RGEWAM
Trigger: CATGGCCCACTCACCCCTGCATCGTTCTGTGTCTGA...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR GCA 90 bp CCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCGCGCAGCCCGCGAGATaGCGCTACGCACCCAGCACA +
Preference number: 4 (lower is better)
Translates to: PVHSRSCHWATRKIDSALAQPAR*RYAPST
Trigger: TGTGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGC...GAGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp CCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCCGGGGCCAGGGCCCCTaGCACCACAACTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: PVHSRSCHWATRKIDSALRGQGP*HHNSSS
Trigger: GCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCG...GAGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCAGTCAGGACTGAGCCCTaGCCCGTAAGGGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPVRTEP*PVRAAP
Trigger: TGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGAC...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGTGTTCCTGCGCTCTATaGTCTCTGCCGTTATCGCCC +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQCSCAL*SLPLSP
Trigger: GGGCGATAACGGCAGAGAGCATAGAGCGCAGGAACA...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS-3UTR GCA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGAGAGGCCCCCGACGTaGTGGCCCTTCCCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPERPPT*WPFPLG
Trigger: TCCAAGAGGGAAGGGCCAGCACGTCGGGGGCCTCTC...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS-3UTR GCA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCCCTCTGCCCGGATTCTaGCTCCTCCTTTCGCTCACC +
Preference number: 4 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTPLPGF*LLLSLT
Trigger: GGTGAGCGAAAGGAGGAGGCAGAATCCGGGCAGAGG...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599748.5
CDS-3UTR CCA 90 bp AATTCACTGAGTGCCTCCCATGCCAGGCAGAGTTCTGGGCGCTCGGGATACAGCGAGCCAAACTCGCCATaGAGGAGCGGGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: NSLSASHARQSSGRSGYSEPNSP*RSGVLA
Trigger: TGCCAGCACCCCGCTCCTCCATGGCGAGTTTGGCTC...GCTGTATCCCGAGCGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGTGAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp TTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCATGAAAGCGAGGGTGAGGGCAAAGCGTaGGCCTCGGGCTGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: LTVTTPTFQHHVWSHESEGEGKA*ASGWVG
Trigger: TCCTACCCAGCCCGAGGCCCACGCTTTGCCCTCACC...CTCGCTTTCATGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATTTGCTCCCTACAATTCACTGAGTGCCTCCCATGCCAGGCAGAGTTCTGGGCGGCAGTGGCCCAGCGCTaGGCCTCGGCACGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: ICSLQFTECLPCQAEFWAAVAQR*ASARFS
Trigger: AGAGAACCGTGCCGAGGCCCAGCGCTGGGCCACTGC...CGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGTGAATTGTAGGGAGCAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp CTACAATTCACTGAGTGCCTCCCATGCCAGGCAGAGTTCTGGGCGCTCGGGATACCCATCCCCGGGCAGTaGCAGTCCTCGGAGCAGACA +
Preference number: 4 (lower is better)
Translates to: LQFTECLPCQAEFWALGIPIPGQ*QSSEQT
Trigger: TGTCTGCTCCGAGGACTGCCACTGCCCGGGGATGGG...TATCCCGAGCGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGTGAATTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACATCATGGGAAGCACGTaGTTCTTACACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHIMGST*FLHHCQ
Trigger: CTGGCAGTGGTGTAAGAACCACGTGCTTCCCATGAT...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ACCAGGCCGTCGTCGAAGCGCGCATGCGGAGCTGCCACCAGGTCAGCGCCTAGGCAGCTTCAGAGATCATaGGAAGCACGTGGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: TRPSSKRACGAATRSAPRQLQRS*EARGSY
Trigger: GTAAGAACCACGTGCTTCCCATGATCTCTGAAGCTG...CCTAGGCGCTGACCTGGTGGCAGCTCCGCATGCGCGCTTCGACGACGGCCTGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCAGGAGAGCAGGTCCAGTaGGTGGCCACCACCCCGGCA +
Preference number: 4 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPGEQVQ*VATTPA
Trigger: TGCCGGGGTGGTGGCCACCCACTGGACCTGCTCTCC...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACCTGAAGCGCTCGCTCTaGATATCCACATCTGACACG +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNLKRSL*ISTSDT
Trigger: CGTGTCAGATGTGGATATCCAGAGCGAGCGCTTCAG...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACGGGTCAGCTCCGACTTaGCACGAGGCAGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDGSAPT*HEAGYG
Trigger: CCCATAGCCTGCCTCGTGCCAAGTCGGAGCTGACCC...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCAGTCCCCAGCCAGCTCTaGGCCCCCACCGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPVPSQL*APTVEG
Trigger: TCCCTCAACGGTGGGGGCCCAGAGCTGGCTGGGGAC...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGAGTGTAGAGCTGCCTTaGGAGAGCCAGGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQSVELP*ESQEVK
Trigger: CTTCACCTCCTGGCTCTCCCAAGGCAGCTCTACACT...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTAGTGTAGAGCTGCCTTaGGAGAGCCAGGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPISVELP*ESQEVK
Trigger: CTTCACCTCCTGGCTCTCCCAAGGCAGCTCTACACT...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAAGTGTAGAGCTGCCTTaGGAGAGCCAGGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQSVELP*ESQEVK
Trigger: CTTCACCTCCTGGCTCTCCCAAGGCAGCTCTACACT...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAATTCCAGCATCACGTCTaGTCCCATGAAAGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQFQHHV*SHESER
Trigger: GCGCTCGCTTTCATGGGACCAGACGTGATGCTGGAA...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACTCCAGGTCCTGTCATTaGGCGACGCGTAAAATAGAC +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHSRSCH*ATRKID
Trigger: GTCTATTTTACGCGTCGCCCAATGACAGGACCTGGA...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp AGCGTCAGGACTGAGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCAATTGCTTTTTAGATTaGGGACGGAGGACGCGCATG +
Preference number: 4 (lower is better)
Translates to: SVRTEPCPVRAAPDQTPGNCFLD*GRRTRM
Trigger: CATGCGCGTCCTCCGTCCCCAATCTAAAAAGCAATT...GCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGTCAGGGGTGATCTCTaGTCCTGCTGCTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGVRGDL*SCCSSA
Trigger: AGCAGAGGAGCAGCAGGACCAGAGATCACCCCTGAC...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS-3UTR CCA 90 bp TTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCATGAAAGCGAGTCCTGGTCTGGCCTCTaGGTGTCTGGCCGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LTVTTPTFQHHVWSHESESWSGL*VSGRLL
Trigger: GAGCAGGCGGCCAGACACCCAGAGGCCAGACCAGGA...CTCGCTTTCATGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599748.5
CDS-3UTR TCA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCACGTCTCCCGAGACCGTaGCGATGCCATCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPRLPRP*RCHPTH
Trigger: GTGAGTGGGATGGCATCGTCACGGTCTCGGGAGACG...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACCACTGCCCAAGGCCCTaGAGCGCTCGCTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDHCPRP*SARSGY
Trigger: ATATCCAGAGCGAGCGCTTCAGGGCCTTGGGCAGTG...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAAGCCAGGAGGCCCAGTaGGCAGTGTACCGATGCCAG +
Preference number: 4 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPSQEAQ*AVYRCQ
Trigger: CTGGCATCGGTACACTGCTCACTGGGCCTCCTGGCT...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGCATCTGCTGGTCCTCTaGTCTGTTACATCAACGGGA +
Preference number: 4 (lower is better)
Translates to: APPGLIGQLNGGTGVDGAHLLVL*SVTSTG
Trigger: TCCCGTTGATGTAACAGAGCAGAGGACCAGCAGATG...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
CDS-3UTR GCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACACATCTGCTGGTCCTCTaGTCTGTTACATCAACGGGA +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATHLLVL*SVTSTG
Trigger: TCCCGTTGATGTAACAGAGCAGAGGACCAGCAGATG...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000600537.5
CDS-3UTR GCA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCACTGAGTCTGAGGGGCTaGGGCTTCGCAGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPLSLRG*GFAGCS
Trigger: GCTGCACCCTGCGAAGCCGCAGCCCCTCAGACTCAG...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTTCAGACACAGAACGATaGAGGGGTGAGTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGSDTER*RGEWAM
Trigger: CATGGCCCACTCACCCCTGCATCGTTCTGTGTCTGA...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GGAATTACGGGGGCCCCTTCGGAGACGGGTGAGTGTAGAGCTGCCTTGGGAGAGTCAGACACAGAACGATaGAGGGGTGAGTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: GITGAPSETGECRAALGESDTER*RGEWAM
Trigger: CATGGCCCACTCACCCCTGCATCGTTCTGTGTCTGA...CTCTCCCAAGGCAGCTCTACACTCACCCGTCTCCGAAGGGGCCCCCGTAATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR GCA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCACGCACCCAGCACAGGTaGACCAGGCCGTCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPRTQHR*TRPSSK
Trigger: CTTCGACGACGGCCTGGTGCACCTGTGCTGGGTGCG...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGGCCCATACTCCACCTaGTCCCCGTCCACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPGPYST*SPSTVS
Trigger: GCTCACAGTGGACGGGGAGCAGGTGGAGTATGGGCC...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACGTACCGATGCCAGGGTaGATCTGTGCCTGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDVPMPG*ICACSG
Trigger: GCCGCTACAGGCACAGATGCACCCTGGCATCGGTAC...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTTTCCCTCTTGGACGTTaGGCTTGTTCCTGCGCTCTA +
Preference number: 4 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPIFPLGR*ACSCAL
Trigger: TAGAGCGCAGGAACAAGCGCAACGTCCAAGAGGGAA...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS-3UTR GCA 90 bp GCCACCTCCAGGCGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCACTGAGTGCCTCCCATaGCAGGCAGAGTTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: ATSRRLLTGPGSWSSFICTECLP*QAEFWA
Trigger: CGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGT...GCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCGCCTGGAGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp TCCAGCATCACGTCTGGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGACGGGACCCTGGCCCTaGGTCTTAAGCCATAGTAGG +
Preference number: 4 (lower is better)
Translates to: SSITSGPMKASAILRRGQTGPWP*VLSHSR
Trigger: CCTACTATGGCTTAAGACCCAGGGCCAGGGTCCCGT...CTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
CDS-3UTR CCA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCATCATGGGAAGCACGTaGTTCTTACACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: DQTPGPALIDQALPSGRAIMGST*FLHHCQ
Trigger: CTGGCAGTGGTGTAAGAACCACGTGCTTCCCATGAT...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCATCATGGGAAGCACGTaGTTCTTACACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LIGQLNGGTGVDGARLRAIMGST*FLHHCQ
Trigger: CTGGCAGTGGTGTAAGAACCACGTGCTTCCCATGAT...GGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAATCATGGGAAGCACGTaGTTCTTACACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATIMGST*FLHHCQ
Trigger: CTGGCAGTGGTGTAAGAACCACGTGCTTCCCATGAT...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCACCGTTCAGCACCTCATaGAGCAGCCCGTCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPPFSTS*SSPSPE
Trigger: CTCGGGAGACGGGCTGCTCCATGAGGTGCTGAACGG...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCATGAAAGCGAGCCGTTCAGCACCTCATaGAGCAGCCCGTCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: LTVTTPTFQHHVWSHESEPFSTS*SSPSPE
Trigger: CTCGGGAGACGGGCTGCTCCATGAGGTGCTGAACGG...CTCGCTTTCATGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACTCAAATCCCCCGTGCTaGTTCACTGCTCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDSNPPC*FTAPAS
Trigger: GCTGGCCGGAGCAGTGAACCAGCACGGGGGATTTGA...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTGAAGCGCTCGCTCTaGATATCCACATCTGACACG +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQLKRSL*ISTSDT
Trigger: CGTGTCAGATGTGGATATCCAGAGCGAGCGCTTCAG...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp CCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCGGCTATGGGCAGGGGTaGGCGAGGCAGGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: PVHSRSCHWATRKIDSALGYGQG*ARQVPQ
Trigger: CTGTGGAACCTGCCTCGCCCACCCCTGCCCATAGCC...GAGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCATGAAAGCGAGGGGTCAGCTCCGACTTaGCACGAGGCAGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: LTVTTPTFQHHVWSHESEGSAPT*HEAGYG
Trigger: CCCATAGCCTGCCTCGTGCCAAGTCGGAGCTGACCC...CTCGCTTTCATGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCAGATGGGCAGGGGTTCTaGCGAGCCAGGAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPDGQGF*RARRGQ
Trigger: CTGGCCTCTCCTGGCTCGCCAGAACCCCTGCCCATC...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCGATGGGCAGGGGTTCTaGCGAGCCAGGAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PVHSRSCHWATRKIDSALDGQGF*RARRGQ
Trigger: CTGGCCTCTCCTGGCTCGCCAGAACCCCTGCCCATC...GAGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GCCCTGAAGCGCTCGCTCTGGATATCCACATCTGACACGAAGCCCCAGGCCACAGGCTACCACGCTCCATaGCCAAGAAAAGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: ALKRSLWISTSDTKPQATGYHAP*PRKGAA
Trigger: TGCTGCGCCTTTTCTTGGCCATGGAGCGTGGTAGCC...TGTGGCCTGGGGCTTCGTGTCAGATGTGGATATCCAGAGCGAGCGCTTCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCGGCTACCACGCTCCATaGCCAAGAAAAGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTGYHAP*PRKGAA
Trigger: TGCTGCGCCTTTTCTTGGCCATGGAGCGTGGTAGCC...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTTTCCAGCATCACGTCTaGTCCCATGAAAGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGFQHHV*SHESER
Trigger: GCGCTCGCTTTCATGGGACCAGACGTGATGCTGGAA...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAATTGCTTTTTAGATTaGGGACGGAGGACGCGCATG +
Preference number: 4 (lower is better)
Translates to: GPMKASAILRRGQGPCHHNCFLD*GRRTRM
Trigger: CATGCGCGTCCTCCGTCCCCAATCTAAAAAGCAATT...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp AGCTGGGAAGCAGGCAGGCAAAAATGTCCAGGAGCTGGGGGTGAGCATCCCACATGCCAGGCAGAGTTCTaGGCGCTCGGGATACAGCTG +
Preference number: 4 (lower is better)
Translates to: SWEAGRQKCPGAGGEHPTCQAEF*ALGIQL
Trigger: CAGCTGTATCCCGAGCGCCCAGAACTCTGCCTGGCA...TGTGGGATGCTCACCCCCAGCTCCTGGACATTTTTGCCTGCCTGCTTCCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR TCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACGCAACAGTGAGCAGTTaGGCAACAGGTCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDATVSS*ATGRGP
Trigger: TGGGCCTCGACCTGTTGCTCAACTGCTCACTGTTGC...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGAGATGGCCAACATaGGCACAAAGTCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDARWPT*AQSPPP
Trigger: TGGAGGGGGACTTTGTGCTCATGTTGGCCATCTCGC...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GCCACCTCCAGGCGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCGAAAGCAGCTGGCAATaGGACCACGAAGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: ATSRRLLTGPGSWSSFICESSWQ*DHEGHG
Trigger: GCCATGGCCTTCGTGGTCTCATTGCCAGCTGCTTTC...GCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCGCCTGGAGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR GCA 90 bp CCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCGGCTCAAATCCCCCGTaGTGGTTCACTGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: PVHSRSCHWATRKIDSALGSNPP*WFTAPA
Trigger: GGCCGGAGCAGTGAACCAGCACGGGGGATTTGAGCC...GAGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp TCCAGCATCACGTCTGGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGTCAGACACAGAACGATaGAGGGGTGAGTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: SSITSGPMKASAILRRGQSDTER*RGEWAM
Trigger: CATGGCCCACTCACCCCTGCATCGTTCTGTGTCTGA...CTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CAGGTTCCTGGTCATCTTTCATTTGCTCCCTACAATTCACTGAGTGCCTCCCATGGCAGCCAGTGGCGGTaGGGGCGGGGCCATGGCCTT +
Preference number: 4 (lower is better)
Translates to: QVPGHLSFAPYNSLSASHGSQWR*GRGHGL
Trigger: AAGGCCATGGCCCCGCCCCCACCGCCACTGGCTGCC...ATGGGAGGCACTCAGTGAATTGTAGGGAGCAAATGAAAGATGACCAGGAACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp CGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCTCCCTACAATTCGCGTGGGCCTCGGGCTaGGTAGGAGCCAAACTCGCC +
Preference number: 4 (lower is better)
Translates to: RLLTGPGSWSSFICSLQFAWASG*VGAKLA
Trigger: GGCGAGTTTGGCTCCTACCCAGCCCGAGGCCCACGC...GAATTGTAGGGAGCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACACAGCTTCAGAGATCATaGGAAGCACGTGGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATQLQRS*EARGSY
Trigger: GTAAGAACCACGTGCTTCCCATGATCTCTGAAGCTG...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTTCTGTCGTTCTGTCTaGATGAGGTTGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: PMKASAILRRGQGPCHHNFCRSV*MRLKDS
Trigger: GCTGTCCTTCAACCTCATCCAGACAGAACGACAGAA...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp CTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCTTCTGTCGTTCTGTCTaGATGAGGTTGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: LIGQLNGGTGVDGARLRAFCRSV*MRLKDS
Trigger: GCTGTCCTTCAACCTCATCCAGACAGAACGACAGAA...GGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACATTCTGTCGTTCTGTCTaGATGAGGTTGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATFCRSV*MRLKDS
Trigger: GCTGTCCTTCAACCTCATCCAGACAGAACGACAGAA...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CCA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAACCAGCTCCCGGGCGTaGTTCTGTCGTTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPTSSRA*FCRSVW
Trigger: CCAGACAGAACGACAGAACCACGCCCGGGAGCTGGT...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTCTGAAGCGCTCGCTCTaGATATCCACATCTGACACG +
Preference number: 4 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGLKRSL*ISTSDT
Trigger: CGTGTCAGATGTGGATATCCAGAGCGAGCGCTTCAG...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCAAGGTCAGCGCCTAGGTaGCTGGGCGAGATGGCCAAC +
Preference number: 4 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPRSAPR*LGEMAN
Trigger: GTTGGCCATCTCGCCCAGCCACCTAGGCGCTGACCT...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCGGCCGACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGTTCCAGCATCACGTCTaGTCCCATGAAAGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: PADSLRPTPASTFQVLSLFQHHV*SHESER
Trigger: GCGCTCGCTTTCATGGGACCAGACGTGATGCTGGAA...CAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGTCCAGGTCCTGTCATTaGGCGACGCGTAAAATAGAC +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQSRSCH*ATRKID
Trigger: GTCTATTTTACGCGTCGCCCAATGACAGGACCTGGA...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCCTCCCGGTCAGCTCCTaGTCTGGCCTCTGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: PVHSRSCHWATRKIDSALLPVSS*SGLWVS
Trigger: AGACACCCAGAGGCCAGACCAGGAGCTGACCGGGAG...GAGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599748.5
CDS-3UTR CCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGAAACGCCCGAAGCGTaGGGTCGGAAATTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGETPEA*GRKFPD
Trigger: ATCTGGAAATTTCCGACCCCACGCTTCGGGCGTTTC...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598088.5
CDS-3UTR TCA 90 bp GCCACCTCCAGGCGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCGACCCCCAAAGGGATTaGCCAATAGAAGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: ATSRRLLTGPGSWSSFICDPQRD*PIEATG
Trigger: CCCGGTTGCTTCTATTGGTCAATCCCTTTGGGGGTC...GCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCGCCTGGAGGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR TCA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCACTGGATATCCACATCTaGCACGAAGCCCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPLDIHI*HEAPGH
Trigger: GTGGCCTGGGGCTTCGTGTCAGATGTGGATATCCAG...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp GCGACGCGTAAAATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTCATCTGCTGGTCCTCTaGTCTGTTACATCAACGGGA +
Preference number: 4 (lower is better)
Translates to: ATRKIDSALSHPGRVGAGHLLVL*SVTSTG
Trigger: TCCCGTTGATGTAACAGAGCAGAGGACCAGCAGATG...ACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTATTTTACGCGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
CDS-3UTR GCA 90 bp AGCGTCAGGACTGAGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCAGCGACTGCCTTTATTaGATAGACCTTTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: SVRTEPCPVRAAPDQTPGSDCLY*IDLFNC
Trigger: GCAATTGAAAAGGTCTATGCAATAAAGGCAGTCGCT...GCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GGTTCCTGGTCATCTTTCATTTGCTCCCTACAATTCACTGAGTGCCTCCCATGCTCAGCTCTCCAACACTaGGCCCGCCGGGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GSWSSFICSLQFTECLPCSALQH*ARRVLR
Trigger: CCGGAGGACCCGGCGGGCCCAGTGTTGGAGAGCTGA...GCATGGGAGGCACTCAGTGAATTGTAGGGAGCAAATGAAAGATGACCAGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp CGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCTCCCTACAATTCGGTGAGGGCAAAGCGTaGGCCTCGGGCTGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: RLLTGPGSWSSFICSLQFGEGKA*ASGWVG
Trigger: TCCTACCCAGCCCGAGGCCCACGCTTTGCCCTCACC...GAATTGTAGGGAGCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGTTCTGTCGTTCTGTCTaGATGAGGTTGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQFCRSV*MRLKDS
Trigger: GCTGTCCTTCAACCTCATCCAGACAGAACGACAGAA...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCATCAAATCCCCCGTGCTaGTTCACTGCTCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPSNPPC*FTAPAS
Trigger: GCTGGCCGGAGCAGTGAACCAGCACGGGGGATTTGA...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TCCAGCATCACGTCTGGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGCTGAAGCGCTCGCTCTaGATATCCACATCTGACACG +
Preference number: 4 (lower is better)
Translates to: SSITSGPMKASAILRRGQLKRSL*ISTSDT
Trigger: CGTGTCAGATGTGGATATCCAGAGCGAGCGCTTCAG...CTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCATGAAAGCGAGGGAACCTGCCCCTCCTaGGCTGATTGGCCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: LTVTTPTFQHHVWSHESEGTCPS*ADWPAK
Trigger: TTTAGCTGGCCAATCAGCCCAGGAGGGGCAGGTTCC...CTCGCTTTCATGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTAATTGCTTTTTAGATTaGGGACGGAGGACGCGCATG +
Preference number: 4 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPINCFLD*GRRTRM
Trigger: CATGCGCGTCCTCCGTCCCCAATCTAAAAAGCAATT...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCACTGGCCCTTCCCTCTTaGACGTTGCGCTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPLALPS*TLRLFL
Trigger: CAGGAACAAGCGCAACGTCCAAGAGGGAAGGGCCAG...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS-3UTR CCA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCCAGGTCTCACTGTCCTaGCCTGACCTTCAGCTCTTA +
Preference number: 4 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTQVSLS*PDLQLL
Trigger: TAAGAGCTGAAGGTCAGGCCAGGACAGTGAGACCTG...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598088.5
CDS-3UTR TCA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCAGCAACAGTGAGCAGTTaGGCAACAGGTCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPATVSS*ATGRGP
Trigger: TGGGCCTCGACCTGTTGCTCAACTGCTCACTGTTGC...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp CAGGTTCCTGGTCATCTTTCATTTGCTCCCTACAATTCACTGAGTGCCTCCCATCATGGAGGAGCGGGGTaGTGGCAGCCAGTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: QVPGHLSFAPYNSLSASHHGGAG*WQPVAV
Trigger: CACCGCCACTGGCTGCCAGCACCCCGCTCCTCCATG...ATGGGAGGCACTCAGTGAATTGTAGGGAGCAAATGAAAGATGACCAGGAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR GCA 90 bp GGTTCCTGGTCATCTTTCATTTGCTCCCTACAATTCACTGAGTGCCTCCCATGCTGCGGCTTCGCAGGGTaGAGCAGCCTGAGACCTCGG +
Preference number: 4 (lower is better)
Translates to: GSWSSFICSLQFTECLPCCGFAG*SSLRPR
Trigger: CCGAGGTCTCAGGCTGCTGCACCCTGCGAAGCCGCA...GCATGGGAGGCACTCAGTGAATTGTAGGGAGCAAATGAAAGATGACCAGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR GCA 90 bp CAGGTTCCTGGTCATCTTTCATTTGCTCCCTACAATTCACTGAGTGCCTCCCATCCCGTGCTGGTTCACTaGTCCGGCCAGCGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: QVPGHLSFAPYNSLSASHPVLVH*SGQRVA
Trigger: GGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGG...ATGGGAGGCACTCAGTGAATTGTAGGGAGCAAATGAAAGATGACCAGGAACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR GCA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCATCAGACACAGAACGATaGAGGGGTGAGTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPSDTER*RGEWAM
Trigger: CATGGCCCACTCACCCCTGCATCGTTCTGTGTCTGA...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCAGCGCTCTATGCTCTCTaGCGTTATCGCCCGGCTAGT +
Preference number: 4 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPALYAL*RYRPAS
Trigger: ACTAGCCGGGCGATAACGGCAGAGAGCATAGAGCGC...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS-3UTR CCA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCACAGGTCTCACTGTCCTaGCCTGACCTTCAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPQVSLS*PDLQLS
Trigger: GGAGAGCTGAAGGTCAGGCCAGGACAGTGAGACCTG...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245222.9
ENST00000340932.7
CDS-3UTR CCA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCAACGGGACCCTGGCCCTaGGTCTTAAGCCATAGTAGG +
Preference number: 4 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPTGPWP*VLSHSR
Trigger: CCTACTATGGCTTAAGACCCAGGGCCAGGGTCCCGT...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
CDS-3UTR CCA 90 bp ATTTGCTCCCTACAATTCACTGAGTGCCTCCCATGCCAGGCAGAGTTCTGGGCGACGGGACCCTGGCCCTaGGTCTTAAGCCATAGTAGG +
Preference number: 4 (lower is better)
Translates to: ICSLQFTECLPCQAEFWATGPWP*VLSHSR
Trigger: CCTACTATGGCTTAAGACCCAGGGCCAGGGTCCCGT...CGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGTGAATTGTAGGGAGCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp TCCAGCATCACGTCTGGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGATCATGGGAAGCACGTaGTTCTTACACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: SSITSGPMKASAILRRGQIMGST*FLHHCQ
Trigger: CTGGCAGTGGTGTAAGAACCACGTGCTTCCCATGAT...CTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp CAAAAATGTCCAGGAGCTGGGGGTGAGCATCCCACAGGCAGGCTGATTTACTTGACCAGCTCCCGGGCGTaGTTCTGTCGTTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: QKCPGAGGEHPTGRLIYLTSSRA*FCRSVW
Trigger: CCAGACAGAACGACAGAACCACGCCCGGGAGCTGGT...CAAGTAAATCAGCCTGCCTGTGGGATGCTCACCCCCAGCTCCTGGACATTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp TGCTCCCTACAATTCACTGAGTGCCTCCCATGCCAGGCAGAGTTCTGGGCGCTCACGGGGCCAGGTTCCTaGTCATCTTTCATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: CSLQFTECLPCQAEFWALTGPGS*SSFICS
Trigger: GGAGCAAATGAAAGATGACCAGGAACCTGGCCCCGT...GAGCGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGTGAATTGTAGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR GCA 90 bp CCACCTCCAGGCGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCTGAGGGTAGGTGTAGATaGAGAAGTAGGCCGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PPPGDSLRGQVPGHLSFAEGRCR*RSRPLS
Trigger: ACTCAGCGGCCTACTTCTGCATCTACACCTACCCTC...AGCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCGCCTGGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCAACATCAACGGGACCCTaGCCCTGGGTCTTAAGCCAT +
Preference number: 4 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPTSTGP*PWVLSH
Trigger: ATGGCTTAAGACCCAGGGCCAGGGTCCCGTTGATGT...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
CDS-3UTR CCA 90 bp CCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCACATCAACGGGACCCTaGCCCTGGGTCTTAAGCCAT +
Preference number: 4 (lower is better)
Translates to: PVHSRSCHWATRKIDSALTSTGP*PWVLSH
Trigger: ATGGCTTAAGACCCAGGGCCAGGGTCCCGTTGATGT...GAGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
CDS-3UTR CCA 90 bp CCGGCCGACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGCAGCTTCAGAGATCATaGGAAGCACGTGGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: PADSLRPTPASTFQVLSLQLQRS*EARGSY
Trigger: GTAAGAACCACGTGCTTCCCATGATCTCTGAAGCTG...CAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TCCAGCATCACGTCTGGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGCAGCTTCAGAGATCATaGGAAGCACGTGGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: SSITSGPMKASAILRRGQQLQRS*EARGSY
Trigger: GTAAGAACCACGTGCTTCCCATGATCTCTGAAGCTG...CTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp TGTGAAGCGGGCACTGCCCAAGGCCCTGAAGCGCTCGCTCTGGATATCCACATCTTCTGTCGTTCTGTCTaGATGAGGTTGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: CEAGTAQGPEALALDIHIFCRSV*MRLKDS
Trigger: GCTGTCCTTCAACCTCATCCAGACAGAACGACAGAA...GATGTGGATATCCAGAGCGAGCGCTTCAGGGCCTTGGGCAGTGCCCGCTTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CCA 90 bp TTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCATGAAAGCGAGCTGAAGCGCTCGCTCTaGATATCCACATCTGACACG +
Preference number: 4 (lower is better)
Translates to: LTVTTPTFQHHVWSHESELKRSL*ISTSDT
Trigger: CGTGTCAGATGTGGATATCCAGAGCGAGCGCTTCAG...CTCGCTTTCATGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACTCCAGGTCCTGTCATTaGGCGACGCGTAAAATAGAC +
Preference number: 4 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDSRSCH*ATRKID
Trigger: GTCTATTTTACGCGTCGCCCAATGACAGGACCTGGA...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp GGCGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCTCCCTACAATGACTGTGGGTTTGGCTaGGTGGGAGATATAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GDSLRGQVPGHLSFAPYNDCGFG*VGDIGV
Trigger: GACCCCTATATCTCCCACTCAGCCAAACCCACAGTC...ATTGTAGGGAGCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR GCA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCACATCTGCTGGTCCTCTaGTCTGTTACATCAACGGGA +
Preference number: 4 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPHLLVL*SVTSTG
Trigger: TCCCGTTGATGTAACAGAGCAGAGGACCAGCAGATG...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
CDS-3UTR GCA 90 bp CCACCTCCAGGCGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCTCATCTGCTGGTCCTCTaGTCTGTTACATCAACGGGA +
Preference number: 4 (lower is better)
Translates to: PPPGDSLRGQVPGHLSFAHLLVL*SVTSTG
Trigger: TCCCGTTGATGTAACAGAGCAGAGGACCAGCAGATG...AGCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCGCCTGGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR GCA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAAGCGACTGCCTTTATTaGATAGACCTTTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: SHESERNPETGPGPLPPQSDCLY*IDLFNC
Trigger: GCAATTGAAAAGGTCTATGCAATAAAGGCAGTCGCT...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp ACCTCCAGGCGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCTCCATCATGGGAAGCACGTaGTTCTTACACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: TSRRLLTGPGSWSSFICSIMGST*FLHHCQ
Trigger: CTGGCAGTGGTGTAAGAACCACGTGCTTCCCATGAT...GGAGCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCGCCTGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACCAGCTTCAGAGATCATaGGAAGCACGTGGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDQLQRS*EARGSY
Trigger: GTAAGAACCACGTGCTTCCCATGATCTCTGAAGCTG...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CCA 90 bp GCCACCTCCAGGCGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCTTCTGTCGTTCTGTCTaGATGAGGTTGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: ATSRRLLTGPGSWSSFICFCRSV*MRLKDS
Trigger: GCTGTCCTTCAACCTCATCCAGACAGAACGACAGAA...GCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCGCCTGGAGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp CAAAAATGTCCAGGAGCTGGGGGTGAGCATCCCACAGGCAGGCTGATTTACTTGTCATCCCTCCCTTCGTaGTATCCTCAACCTACCCCC +
Preference number: 4 (lower is better)
Translates to: QKCPGAGGEHPTGRLIYLSSLPS*YPQPTP
Trigger: GGGGGTAGGTTGAGGATACCACGAAGGGAGGGATGA...CAAGTAAATCAGCCTGCCTGTGGGATGCTCACCCCCAGCTCCTGGACATTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR GCA 90 bp GGCGACTCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCTCCCTACAATCTACAATTCACTGAGTaGCTCCCATGCCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GDSLRGQVPGHLSFAPYNLQFTE*LPCQAE
Trigger: CTCTGCCTGGCATGGGAGGCACTCAGTGAATTGTAG...ATTGTAGGGAGCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGAGTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CCA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCATTCTGTCGTTCTGTCTaGATGAGGTTGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPFCRSV*MRLKDS
Trigger: GCTGTCCTTCAACCTCATCCAGACAGAACGACAGAA...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCAGCGACTGCCTTTATTaGATAGACCTTTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTSDCLY*IDLFNC
Trigger: GCAATTGAAAAGGTCTATGCAATAAAGGCAGTCGCT...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR GCA 90 bp TTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCATGAAAGCGAGAGCGACTGCCTTTATTaGATAGACCTTTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: LTVTTPTFQHHVWSHESESDCLY*IDLFNC
Trigger: GCAATTGAAAAGGTCTATGCAATAAAGGCAGTCGCT...CTCGCTTTCATGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR TCA 90 bp TCCTTACGGGGCCAGGTTCCTGGTCATCTTTCATTTGCTCCCTACAATTCACTGGCTGATTTACTTGACTaGCTGTGGGTTTGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SLRGQVPGHLSFAPYNSLADLLD*LWVWLS
Trigger: ACTCAGCCAAACCCACAGTCAGTCAAGTAAATCAGC...CAGTGAATTGTAGGGAGCAAATGAAAGATGACCAGGAACCTGGCCCCGTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR GCA 90 bp ATTTGCTCCCTACAATTCACTGAGTGCCTCCCATGCCAGGCAGAGTTCTGGGCGTGGTCATCTTTCATTTaGTCCCTACAATTCACTGAG +
Preference number: 4 (lower is better)
Translates to: ICSLQFTECLPCQAEFWAWSSFI*SLQFTE
Trigger: CTCAGTGAATTGTAGGGAGCAAATGAAAGATGACCA...CGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGTGAATTGTAGGGAGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS GCA 90 bp GCGCTGGGCCTCGGCACGGTTCTCTTCGTAGGTGGCGGCCCCATCTaGCCGGAAGGTGCGAGTGGCTCTGCGCCGGGCCCCGCGCCGGCC +
Preference number: 5 (lower is better)
Translates to: ALGLGTVLFVGGGPI*PEGASGSAPGPAPA
Trigger: GGCCGGCGCGGGGCCCGGCGCAGAGCCACTCGCACCTTCCGGGCAGATGGGGCCGCCACCTACGAAGAGAACCGTGCCGAGGCCCAGCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000245222.9
ENST00000597434.5
ENST00000598088.5
ENST00000598574.1
ENST00000599029.2
ENST00000599748.5
ENST00000600537.5
ENST00000601704.1
ENST00000601712.5
CDS CCA 90 bp GCGGGAGAGGCCGAGAGCTGGGCGGGGCCTCGCGCTTCGGGAGACTaGCCGCCATCGTGGGTGAGGGCCGACGCGCAGCGGAGACGACGT +
Preference number: 5 (lower is better)
Translates to: AGEAESWAGPRASGD*PPSWVRADAQRRRR
Trigger: ACGTCGTCTCCGCTGCGCGTCGGCCCTCACCCACGATGGCGGCCAGTCTCCCGAAGCGCGAGGCCCCGCCCAGCTCTCGGCCTCTCCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597434.5
CDS CCA 90 bp GAGAGCTGGGCGGGGCCTCGCGCTTCGGGAGACTGGCCGCCATCGTaGGTGAGGGCCGACGCGCAGCGGAGACGACGTCGCGGCCCCATA +
Preference number: 5 (lower is better)
Translates to: ESWAGPRASGDWPPS*VRADAQRRRRRGPI
Trigger: TATGGGGCCGCGACGTCGTCTCCGCTGCGCGTCGGCCCTCACCCACGATGGCGGCCAGTCTCCCGAAGCGCGAGGCCCCGCCCAGCTCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597434.5
CDS CCA 90 bp GGGCAGTGGCCCAGCGCTGGGCCTCGGCACGGTTCTCTTCGTAGGTaGCGGCCCCATCTGCCCGGAAGGTGCGAGTGGCTCTGCGCCGGG +
Preference number: 5 (lower is better)
Translates to: GQWPSAGPRHGSLRR*RPHLPGRCEWLCAG
Trigger: CCCGGCGCAGAGCCACTCGCACCTTCCGGGCAGATGGGGCCGCCACCTACGAAGAGAACCGTGCCGAGGCCCAGCGCTGGGCCACTGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000245222.9
ENST00000597434.5
ENST00000598088.5
ENST00000598574.1
ENST00000599029.2
ENST00000599748.5
ENST00000600537.5
ENST00000601704.1
ENST00000601712.5
CDS CCA 90 bp GGCGGGGCCATGGCCTTAGCCCTGACCAGGGTGCTCCTAGGCCCGTaGCCCCAGCTCCCGGTCAGCTCCTGGTCTGGCCTACGCCGGGTC +
Preference number: 5 (lower is better)
Translates to: GGAMALALTRVLLGP*PQLPVSSWSGLRRV
Trigger: GACCCGGCGTAGGCCAGACCAGGAGCTGACCGGGAGCTGGGGCCACGGGCCTAGGAGCACCCTGGTCAGGGCTAAGGCCATGGCCCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597434.5
CDS TCA 90 bp CTTCAGCTCTCCAACACTGGGCCCGCCGGGTCCTCCGGGAGCCACTaGGAGGCCGTCGGCGTCGGGCCAGAGCGTCACCGCGCGACGCAT +
Preference number: 5 (lower is better)
Translates to: LQLSNTGPAGSSGSH*EAVGVGPERHRATH
Trigger: ATGCGTCGCGCGGTGACGCTCTGGCCCGACGCCGACGGCCTCTCAGTGGCTCCCGGAGGACCCGGCGGGCCCAGTGTTGGAGAGCTGAAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340932.7
ENST00000600537.5
ENST00000601712.5
CDS CCA 90 bp GGCGGGGCCATGGCCTTAGCCCTGACCAGGGTGCTCCTAGGCCCGTaGCCCCAGCTCCCGGTCAGCTCCTGGTCTGGCCTCTGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: GGAMALALTRVLLGP*PQLPVSSWSGLWSC
Trigger: GCAGGACCAGAGGCCAGACCAGGAGCTGACCGGGAGCTGGGGCCACGGGCCTAGGAGCACCCTGGTCAGGGCTAAGGCCATGGCCCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245222.9
ENST00000598088.5
CDS GCA 90 bp CAGCCCGTGGGCAGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTaGTGGAAGTGCTGGAGTCTGAGTCCTCCCGCGGGCCCCCGTGCT +
Preference number: 5 (lower is better)
Translates to: QPVGSSGLSSIEGRR*WKCWSLSPPAGPRA
Trigger: AGCACGGGGGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGAGCTGCCCACGGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597434.5
CDS CCA 90 bp GGCGGGGCCATGGCCTTAGCCCTGACCAGGGTGCTCCTAGGCCCGTaGCCCCAGCTCCCGGTCAGCTCCTGGTCTGGCCTCTGGGTGTCT +
Preference number: 5 (lower is better)
Translates to: GGAMALALTRVLLGP*PQLPVSSWSGLWVS
Trigger: AGACACCCAGAGGCCAGACCAGGAGCTGACCGGGAGCTGGGGCCACGGGCCTAGGAGCACCCTGGTCAGGGCTAAGGCCATGGCCCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599748.5
CDS CCA 90 bp GGCGGGGCCATGGCCTTAGCCCTGACCAGGGTGCTCCTAGGCCCGTaGCCCCAGCTCCCGGTCAGCTCCTGGTCTGGCCTCTGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: GGAMALALTRVLLGP*PQLPVSSWSGLCGK
Trigger: CTTCCCACAGAGGCCAGACCAGGAGCTGACCGGGAGCTGGGGCCACGGGCCTAGGAGCACCCTGGTCAGGGCTAAGGCCATGGCCCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598574.1
ENST00000599029.2
CDS CCA 90 bp CCTCGGCCAACGGGACCAGGCCACCCCGGGGCCTGGCTTCAGGTTTaGGGCGCAGCCGCTGTATGTGCAGGGCCTGGTCCTGCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: PRPTGPGHPGAWLQV*GAAAVCAGPGPAAP
Trigger: AGGAGCAGCAGGACCAGGCCCTGCACATACAGCGGCTGCGCCCCAAACCTGAAGCCAGGCCCCGGGGTGGCCTGGTCCCGTTGGCCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600537.5
CDS CCA 90 bp CCCGTGGGCAGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTaGAAGTGCTGGAGTCTGAGTCCTCCCGCGGGCCCCCGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: PVGSSGLSSIEGRRC*KCWSLSPPAGPRAG
Trigger: ACCAGCACGGGGGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGAGCTGCCCACGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597434.5
CDS TCA 90 bp CCACATGCGAGCGCCTGCAAGGGGCAGGGGCCAAGAGCTGGTCCCTaGGCACTGACCTGGGTGTCTGGCCGCCTGCTCTCCAGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: PHASACKGQGPRAGP*ALTWVSGRLLSRER
Trigger: CCGCTCCCTGGAGAGCAGGCGGCCAGACACCCAGGTCAGTGCTCAGGGACCAGCTCTTGGCCCCTGCCCCTTGCAGGCGCTCGCATGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598574.1
ENST00000599029.2
CDS GCA 90 bp CAGCCCGTGGGCAGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTaGTGGAAGTGCTGGAGTCTGAGTCCTCCCGCGGGCGATGCCAGG +
Preference number: 5 (lower is better)
Translates to: QPVGSSGLSSIEGRR*WKCWSLSPPAGDAR
Trigger: CCTGGCATCGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGAGCTGCCCACGGGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599029.2
CDS CCA 90 bp GGCGGGGCCATGGCCTTAGCCCTGACCAGGGTGCTCCTAGGCCCGTaGCCCCAGCTCCCGGTCAGCTCCTGGTCTGGCCTCCTTAGGAAC +
Preference number: 5 (lower is better)
Translates to: GGAMALALTRVLLGP*PQLPVSSWSGLLRN
Trigger: GTTCCTAAGGAGGCCAGACCAGGAGCTGACCGGGAGCTGGGGCCACGGGCCTAGGAGCACCCTGGTCAGGGCTAAGGCCATGGCCCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593308.1
CDS CCA 90 bp CCCGTGGGCAGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTaGAAGTGCTGGAGTCTGAGTCCTCCCGCGGGCGATGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: PVGSSGLSSIEGRRC*KCWSLSPPAGDARV
Trigger: CACCCTGGCATCGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGAGCTGCCCACGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599029.2
CDS GCA 90 bp GGCAGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTaGTGGAGTCTGAGTCCTCCCGCGGGCCCCCGTGCTGGTTCACTG +
Preference number: 5 (lower is better)
Translates to: GSSGLSSIEGRRCWK*WSLSPPAGPRAGSL
Trigger: CAGTGAACCAGCACGGGGGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGAGCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597434.5
CDS CCA 90 bp CAGGATAGAGCAGCTGCCCAGCACCTCACCCCCATCCCCGGGCAGTaGCAGTCCTCGGAGCAGACAGGTGAGGGCAGTGGCCCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: QDRAAAQHLTPIPGQ*QSSEQTGEGSGPAL
Trigger: CAGCGCTGGGCCACTGCCCTCACCTGTCTGCTCCGAGGACTGCCACTGCCCGGGGATGGGGGTGAGGTGCTGGGCAGCTGCTCTATCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598574.1
CDS-3UTR CAA 90 bp GGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACTCTGGGCCCCCACCGTaGAGGGACAGGATGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GPMKASAILRRGQGPCHHSGPPP*RDRMGR
Trigger: CCTGCCCATCCTGTCCCTCAACGGTGGGGGCCCAGA...GTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp AGCGTCAGGACTGAGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCCAGGCCCCGCCCTCATaGATCAGGCACTACCCTCGG +
Preference number: 5 (lower is better)
Translates to: SVRTEPCPVRAAPDQTPGQAPPS*IRHYPR
Trigger: CCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTG...GCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS GCA 90 bp GGCAGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTaGTGGAGTCTGAGTCCTCCCGCGGGCGATGCCAGGGTGCATCTG +
Preference number: 5 (lower is better)
Translates to: GSSGLSSIEGRRCWK*WSLSPPAGDARVHL
Trigger: CAGATGCACCCTGGCATCGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGAGCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599029.2
CDS CCA 90 bp CAGGGCCTGCGATGTAAGGGTGAGGGCAAAGCGTGGGCCTCGGGCTaGGTAGGAGCCAAACTCGCCATGGAGGAGCGGGGTGCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: QGLRCKGEGKAWASG*VGAKLAMEERGAGS
Trigger: GCTGCCAGCACCCCGCTCCTCCATGGCGAGTTTGGCTCCTACCCAGCCCGAGGCCCACGCTTTGCCCTCACCCTTACATCGCAGGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000245222.9
ENST00000593308.1
ENST00000597434.5
ENST00000598088.5
ENST00000598574.1
ENST00000599029.2
ENST00000599748.5
ENST00000601704.1
ENST00000601712.5
CDS CCA 90 bp AGAGGAGCCACATGCGAGCGCCTGCAAGGGGCAGGGGCCAAGAGCTaGTCCCTGAGCACTGACCTGGGTGTCTGGCCGCCTGCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: RGATCERLQGAGAKS*SLSTDLGVWPPALQ
Trigger: CTGGAGAGCAGGCGGCCAGACACCCAGGTCAGTGCTCAGGGACCAGCTCTTGGCCCCTGCCCCTTGCAGGCGCTCGCATGTGGCTCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598574.1
ENST00000599029.2
CDS CCA 90 bp AGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTaGAGTCTGAGTCCTCCCGCGGGCCCCCGTGCTGGTTCACTGCTC +
Preference number: 5 (lower is better)
Translates to: SSGLSSIEGRRCWKC*SLSPPAGPRAGSLL
Trigger: GAGCAGTGAACCAGCACGGGGGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597434.5
CDS-3UTR CAA 90 bp CTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGAAGGGTCAGCTCCGACTaGGCACGAGGCAGGCTATGG +
Preference number: 5 (lower is better)
Translates to: LNGGTGVDGARLRALTGRRVSSD*ARGRLW
Trigger: CCATAGCCTGCCTCGTGCCAAGTCGGAGCTGACCCT...TCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTGGGCCCCCACCGTaGAGGGACAGGATGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PMKASAILRRGQGPCHHNSGPPP*RDRMGR
Trigger: CCTGCCCATCCTGTCCCTCAACGGTGGGGGCCCAGA...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CAA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACATCAGGCTCCGCCCCATaGGAATGTAGGCCCCGCCCC +
Preference number: 5 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATSGSAP*ECRPRP
Trigger: GGGGCGGGGCCTACATTCCAATGGGGCGGAGCCTGA...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS GCA 90 bp GGGCCAGAGAGGCCCCCGACGTGCTGGCCCTTCCCTCTTGGACGTTaGGCTTGTTCCTGCGCTCTATGCTCTCTGCCGTTATCGCCCGGC +
Preference number: 5 (lower is better)
Translates to: GPERPPTCWPFPLGR*ACSCALCSLPLSPG
Trigger: GCCGGGCGATAACGGCAGAGAGCATAGAGCGCAGGAACAAGCGCAACGTCCAAGAGGGAAGGGCCAGCACGTCGGGGGCCTCTCTGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS GCA 90 bp GCGATGCCAGGGTGCATCTGTGCCTGTAGCGGCCCATACTCCACCTaGTCCCCGTCCACTGTGAGCACGCCGCGTGGTGTGAGCGGCTCT +
Preference number: 5 (lower is better)
Translates to: AMPGCICACSGPYST*SPSTVSTPRGVSGS
Trigger: AGAGCCGCTCACACCACGCGGCGTGCTCACAGTGGACGGGGAGCAGGTGGAGTATGGGCCGCTACAGGCACAGATGCACCCTGGCATCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599029.2
CDS CCA 90 bp AGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTaGAGTCTGAGTCCTCCCGCGGGCGATGCCAGGGTGCATCTGTGC +
Preference number: 5 (lower is better)
Translates to: SSGLSSIEGRRCWKC*SLSPPAGDARVHLC
Trigger: GCACAGATGCACCCTGGCATCGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599029.2
CDS CCA 90 bp CCTCGGCCAACGGGACCAGGCCACCCCGGGGCCTGGCTTCAGGTTTaGGGCGCAGCCGCTGTATGTGCAGGGCCCTTAGGAACTACATCT +
Preference number: 5 (lower is better)
Translates to: PRPTGPGHPGAWLQV*GAAAVCAGPLGTTS
Trigger: AGATGTAGTTCCTAAGGGCCCTGCACATACAGCGGCTGCGCCCCAAACCTGAAGCCAGGCCCCGGGGTGGCCTGGTCCCGTTGGCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599033.1
CDS-3UTR CAA 90 bp CTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCGGCCTGGCTTCAGGTTaGGGGCGCAGCCGCTGTATG +
Preference number: 5 (lower is better)
Translates to: LIGQLNGGTGVDGARLRAGLASG*GRSRCM
Trigger: CATACAGCGGCTGCGCCCCAAACCTGAAGCCAGGCC...GGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAATCTGGGCCCCCACCGTaGAGGGACAGGATGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SHESERNPETGPGPLPPQSGPPP*RDRMGR
Trigger: CCTGCCCATCCTGTCCCTCAACGGTGGGGGCCCAGA...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CAA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGCAGGCCCCGCCCTCATaGATCAGGCACTACCCTCGG +
Preference number: 5 (lower is better)
Translates to: APPGLIGQLNGGTGVDGAQAPPS*IRHYPR
Trigger: CCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTG...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS CCA 90 bp CCGCTGTATGTGCAGGGCCTGCGATGTAAGGGTGAGGGCAAAGCGTaGGCCTCGGGCTGGGTAGGAGCCAAACTCGCCATGGAGGAGCGG +
Preference number: 5 (lower is better)
Translates to: PLYVQGLRCKGEGKA*ASGWVGAKLAMEER
Trigger: CCGCTCCTCCATGGCGAGTTTGGCTCCTACCCAGCCCGAGGCCCACGCTTTGCCCTCACCCTTACATCGCAGGCCCTGCACATACAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000245222.9
ENST00000593308.1
ENST00000597434.5
ENST00000598088.5
ENST00000598574.1
ENST00000599029.2
ENST00000599748.5
ENST00000601704.1
ENST00000601712.5
CDS-3UTR CAA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTGGCCTGGCTTCAGGTTaGGGGCGCAGCCGCTGTATG +
Preference number: 5 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPIGLASG*GRSRCM
Trigger: CATACAGCGGCTGCGCCCCAAACCTGAAGCCAGGCC...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGGCCTGGCTTCAGGTTaGGGGCGCAGCCGCTGTATG +
Preference number: 5 (lower is better)
Translates to: SHESERNPETGPGPLPPQGLASG*GRSRCM
Trigger: CATACAGCGGCTGCGCCCCAAACCTGAAGCCAGGCC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CAA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGGTCAGCTCCGACTaGGCACGAGGCAGGCTATGG +
Preference number: 5 (lower is better)
Translates to: APPGLIGQLNGGTGVDGARVSSD*ARGRLW
Trigger: CCATAGCCTGCCTCGTGCCAAGTCGGAGCTGACCCT...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAAGGGTCAGCTCCGACTaGGCACGAGGCAGGCTATGG +
Preference number: 5 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATRVSSD*ARGRLW
Trigger: CCATAGCCTGCCTCGTGCCAAGTCGGAGCTGACCCT...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CAA 90 bp AAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACTGAGTGTAGAGCTGCCTaGGGAGAGCCAGGAGGTGAA +
Preference number: 5 (lower is better)
Translates to: KWRHRSGWGEAAGPDRPTECRAA*GEPGGE
Trigger: TTCACCTCCTGGCTCTCCCAAGGCAGCTCTACACTC...AGTCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS TCA 90 bp TTGTTTAGTTTCAGGGCTCCCGCCCCGGGCAGCCAGGAGGCCCAGTaGGCAGTGTACCGATGCCAGGGTGCATCTGTGCCTGTAGCGGCC +
Preference number: 5 (lower is better)
Translates to: LFSFRAPAPGSQEAQ*AVYRCQGASVPVAA
Trigger: GGCCGCTACAGGCACAGATGCACCCTGGCATCGGTACACTGCTCACTGGGCCTCCTGGCTGCCCGGGGCGGGAGCCCTGAAACTAAACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS GCA 90 bp GAGGGTAGGTGTAGATGCAGAAGTAGGCCGCTGAGTCTGAGGGGCTaGGGCTTCGCAGGGTGCAGCAGCCTGAGACCTCGGCCAACGGGA +
Preference number: 5 (lower is better)
Translates to: EGRCRCRSRPLSLRG*GFAGCSSLRPRPTG
Trigger: TCCCGTTGGCCGAGGTCTCAGGCTGCTGCACCCTGCGAAGCCGCAGCCCCTCAGACTCAGCGGCCTACTTCTGCATCTACACCTACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000245222.9
ENST00000597434.5
ENST00000598088.5
ENST00000598574.1
ENST00000599029.2
ENST00000599033.1
ENST00000599748.5
ENST00000600537.5
ENST00000601704.1
ENST00000601712.5
CDS GCA 90 bp GCTATCGAGAACACGGCCTGGGTAGGGCCAGAGAGGCCCCCGACGTaGTGGCCCTTCCCTCTTGGACGTTGCGCTTGTTCCTGCGCTCTA +
Preference number: 5 (lower is better)
Translates to: AIENTAWVGPERPPT*WPFPLGRCACSCAL
Trigger: TAGAGCGCAGGAACAAGCGCAACGTCCAAGAGGGAAGGGCCAGCACGTCGGGGGCCTCTCTGGCCCTACCCAGGCCGTGTTCTCGATAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS CCA 90 bp ATCGAGAACACGGCCTGGGTAGGGCCAGAGAGGCCCCCGACGTGCTaGCCCTTCCCTCTTGGACGTTGCGCTTGTTCCTGCGCTCTATGC +
Preference number: 5 (lower is better)
Translates to: IENTAWVGPERPPTC*PFPLGRCACSCALC
Trigger: GCATAGAGCGCAGGAACAAGCGCAACGTCCAAGAGGGAAGGGCCAGCACGTCGGGGGCCTCTCTGGCCCTACCCAGGCCGTGTTCTCGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS-3UTR CAA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTAGGGTCAGCTCCGACTaGGCACGAGGCAGGCTATGG +
Preference number: 5 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPIRVSSD*ARGRLW
Trigger: CCATAGCCTGCCTCGTGCCAAGTCGGAGCTGACCCT...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp GACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGGACGAGTGTAGAGCTGCCTaGGGAGAGCCAGGAGGTGAA +
Preference number: 5 (lower is better)
Translates to: DSALSHPGRVGAGGKRQDECRAA*GEPGGE
Trigger: TTCACCTCCTGGCTCTCCCAAGGCAGCTCTACACTC...GTCCTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp GGCCAAGAAAAGGCGCAGCAGCGCAGCCCGCGAGATGCCGCTACGCACCCAGCAGAGTGTAGAGCTGCCTaGGGAGAGCCAGGAGGTGAA +
Preference number: 5 (lower is better)
Translates to: GQEKAQQRSPRDAATHPAECRAA*GEPGGE
Trigger: TTCACCTCCTGGCTCTCCCAAGGCAGCTCTACACTC...TGCTGGGTGCGTAGCGGCATCTCGCGGGCTGCGCTGCTGCGCCTTTTCTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CAA 90 bp GCCCCTCCTGGGCTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGGCTGGCCCTTCCCTCTaGGACGTTGCGCTTGTTCCT +
Preference number: 5 (lower is better)
Translates to: APPGLIGQLNGGTGVDGAAGPSL*DVALVP
Trigger: AGGAACAAGCGCAACGTCCAAGAGGGAAGGGCCAGC...CGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAGCCCAGGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS CCA 90 bp CTGGGTAGGGCCAGAGAGGCCCCCGACGTGCTGGCCCTTCCCTCTTaGACGTTGCGCTTGTTCCTGCGCTCTATGCTCTCTGCCGTTATC +
Preference number: 5 (lower is better)
Translates to: LGRAREAPDVLALPS*TLRLFLRSMLSAVI
Trigger: GATAACGGCAGAGAGCATAGAGCGCAGGAACAAGCGCAACGTCCAAGAGGGAAGGGCCAGCACGTCGGGGGCCTCTCTGGCCCTACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS CCA 90 bp CGCTCCCAGATCCCTTTCTTCCGGAAAGCTATCGAGAACACGGCCTaGGTAGGGCCAGAGAGGCCCCCGACGTGCTGGCCCTTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: RSQIPFFRKAIENTA*VGPERPPTCWPFPL
Trigger: AAGAGGGAAGGGCCAGCACGTCGGGGGCCTCTCTGGCCCTACCCAGGCCGTGTTCTCGATAGCTTTCCGGAAGAAAGGGATCTGGGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS-3UTR CAA 90 bp GGAATTACGGGGGCCCCTTCGGAGACGGGTGAGTGTAGAGCTGCCTTGGGAGAGAGGGTCAGCTCCGACTaGGCACGAGGCAGGCTATGG +
Preference number: 5 (lower is better)
Translates to: GITGAPSETGECRAALGERVSSD*ARGRLW
Trigger: CCATAGCCTGCCTCGTGCCAAGTCGGAGCTGACCCT...CTCTCCCAAGGCAGCTCTACACTCACCCGTCTCCGAAGGGGCCCCCGTAATTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CAA 90 bp GCACTGCCCAAGGCCCTGAAGCGCTCGCTCTGGATATCCACATCTGACACGAAGTCTGGGCCCCCACCGTaGAGGGACAGGATGGGCAGG +
Preference number: 5 (lower is better)
Translates to: ALPKALKRSLWISTSDTKSGPPP*RDRMGR
Trigger: CCTGCCCATCCTGTCCCTCAACGGTGGGGGCCCAGA...CTTCGTGTCAGATGTGGATATCCAGAGCGAGCGCTTCAGGGCCTTGGGCAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CAA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACAGAGTGTAGAGCTGCCTaGGGAGAGCCAGGAGGTGAA +
Preference number: 5 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATECRAA*GEPGGE
Trigger: TTCACCTCCTGGCTCTCCCAAGGCAGCTCTACACTC...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CAA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCGGCGGGTACCAAGCTaGTTTAGTTTCAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: DQTPGPALIDQALPSGRARRVPS*FSFRAP
Trigger: GGGAGCCCTGAAACTAAACAAGCTTGGTACCCGCCG...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACACGGCGGGTACCAAGCTaGTTTAGTTTCAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATRRVPS*FSFRAP
Trigger: GGGAGCCCTGAAACTAAACAAGCTTGGTACCCGCCG...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CAA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCTTCCCTCTTGGACGTaGCGCTTGTTCCTGCGCTCT +
Preference number: 5 (lower is better)
Translates to: DQTPGPALIDQALPSGRALPSWT*RLFLRS
Trigger: AGAGCGCAGGAACAAGCGCAACGTCCAAGAGGGAAG...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS CCA 90 bp GCGAGATCAGGGAGCGGTGAACCTGATAAGGAAACGCCCGAAGCGTaGGGTCGGAAATTTCCAGATGCCCCGACTAGCCCTGCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: ARSGSGEPDKETPEA*GRKFPDAPTSPASP
Trigger: GGGGCTGGCAGGGCTAGTCGGGGCATCTGGAAATTTCCGACCCCACGCTTCGGGCGTTTCCTTATCAGGTTCACCGCTCCCTGATCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598088.5
CDS-3UTR CAA 90 bp CTGATTGGCCAGCTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCGACCCCCAAAGGGATaGACCAATAGAAGCAACCGG +
Preference number: 5 (lower is better)
Translates to: LIGQLNGGTGVDGARLRARPPKG*TNRSNR
Trigger: CCGGTTGCTTCTATTGGTCAATCCCTTTGGGGGTCG...GGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAGCTGGCCAATCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp ATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACTCTAGCAGCCAGGCCACACGACCCCCAAAGGGATaGACCAATAGAAGCAACCGG +
Preference number: 5 (lower is better)
Translates to: ILRRGQGPCHHNSSSQATRPPKG*TNRSNR
Trigger: CCGGTTGCTTCTATTGGTCAATCCCTTTGGGGGTCG...TGTGGCCTGGCTGCTAGAGTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CAA 90 bp TCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAAGAGTGTAGAGCTGCCTaGGGAGAGCCAGGAGGTGAA +
Preference number: 5 (lower is better)
Translates to: SHESERNPETGPGPLPPQECRAA*GEPGGE
Trigger: TTCACCTCCTGGCTCTCCCAAGGCAGCTCTACACTC...TTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS-3UTR CAA 90 bp ATAGACTCCGCCCTCAGCCATCCTGGCCGGGTAGGAGCAGGTGGCAAGCGTCAGCGGCGGGTACCAAGCTaGTTTAGTTTCAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: IDSALSHPGRVGAGGKRQRRVPS*FSFRAP
Trigger: GGGAGCCCTGAAACTAAACAAGCTTGGTACCCGCCG...CTGACGCTTGCCACCTGCTCCTACCCGGCCAGGATGGCTGAGGGCGGAGTCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCATCAGGCTCCGCCCCATaGGAATGTAGGCCCCGCCCC +
Preference number: 5 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPSGSAP*ECRPRP
Trigger: GGGGCGGGGCCTACATTCCAATGGGGCGGAGCCTGA...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp CTAAATGGAGGCACCGGAGTGGATGGGGCGAGGCTGCGGGCCCTGACCGGCCGACAATTGCTTTTTAGATaGGGGACGGAGGACGCGCAT +
Preference number: 5 (lower is better)
Translates to: LNGGTGVDGARLRALTGRQLLFR*GTEDAH
Trigger: ATGCGCGTCCTCCGTCCCCAATCTAAAAAGCAATTG...TCGGCCGGTCAGGGCCCGCAGCCTCGCCCCATCCACTCCGGTGCCTCCATTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS CCA 90 bp ATCAGGTTCAAGCACAGAGCCCTAGATGTCCTCCAGTCTTGGGCCTaGGTCTCTGTCCCTGGGTCCCCGAGACCTGGACCTGGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: IRFKHRALDVLQSWA*VSVPGSPRPGPGSP
Trigger: TGGAGACCCAGGTCCAGGTCTCGGGGACCCAGGGACAGAGACCCAGGCCCAAGACTGGAGGACATCTAGGGCTCTGTGCTTGAACCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593308.1
ENST00000599033.1
CDS-3UTR CAA 90 bp AGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCATTCGACCCCCAAAGGGATaGACCAATAGAAGCAACCGG +
Preference number: 5 (lower is better)
Translates to: RRQAPPSLIRHYPRDEPIRPPKG*TNRSNR
Trigger: CCGGTTGCTTCTATTGGTCAATCCCTTTGGGGGTCG...AATGGGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp GACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGGGCGACAGGGTCAGCTCCGACTaGGCACGAGGCAGGCTATGG +
Preference number: 5 (lower is better)
Translates to: DSLRPTPASTFQVLSLGDRVSSD*ARGRLW
Trigger: CCATAGCCTGCCTCGTGCCAAGTCGGAGCTGACCCT...GTCGCCCAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCATCTGGGCCCCCACCGTaGAGGGACAGGATGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPSGPPP*RDRMGR
Trigger: CCTGCCCATCCTGTCCCTCAACGGTGGGGGCCCAGA...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp CCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCTCTGGGCCCCCACCGTaGAGGGACAGGATGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PVHSRSCHWATRKIDSALSGPPP*RDRMGR
Trigger: CCTGCCCATCCTGTCCCTCAACGGTGGGGGCCCAGA...GAGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS CCA 90 bp CCTGGGTCTCCATCCATTGGTCCCCAATCCATAGGCCTGCGTGTCTaGCCCTGGGCCCCCAAACCGCCATCCGCACTCTTATTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: PGSPSIGPQSIGLRV*PWAPKPPSALLFPE
Trigger: TTCTGGAAATAAGAGTGCGGATGGCGGTTTGGGGGCCCAGGGCCAGACACGCAGGCCTATGGATTGGGGACCAATGGATGGAGACCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593308.1
ENST00000599033.1
CDS CCA 90 bp GGCTCTCTCGGGTCCAGGACGTCTGCTTCACCCCCAAACCTGCCCTaGCCCCATTATGGGAACCTCAAATCAGGTTCAAGCACAGAGCCC +
Preference number: 5 (lower is better)
Translates to: GSLGSRTSASPPNLP*PHYGNLKSGSSTEP
Trigger: GGGCTCTGTGCTTGAACCTGATTTGAGGTTCCCATAATGGGGCCAGGGCAGGTTTGGGGGTGAAGCAGACGTCCTGGACCCGAGAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593308.1
ENST00000599033.1
CDS-3UTR CAA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCAGGCCTGGCTTCAGGTTaGGGGCGCAGCCGCTGTATG +
Preference number: 5 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPGLASG*GRSRCM
Trigger: CATACAGCGGCTGCGCCCCAAACCTGAAGCCAGGCC...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245222.9
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp CCAGGAGGCCCAGTGAGCAGTGTACCGATGCCAGGGTGCATCTGTGCCTGTAGCCGACCCCCAAAGGGATaGACCAATAGAAGCAACCGG +
Preference number: 5 (lower is better)
Translates to: PGGPVSSVPMPGCICACSRPPKG*TNRSNR
Trigger: CCGGTTGCTTCTATTGGTCAATCCCTTTGGGGGTCG...GCTACAGGCACAGATGCACCCTGGCATCGGTACACTGCTCACTGGGCCTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426514.2
CDS-3UTR CAA 90 bp ACTGAGTGCCTCCCATGCCAGGCAGAGTTCTGGGCGCTCGGGATACAGCTGGGACGACCCCCAAAGGGATaGACCAATAGAAGCAACCGG +
Preference number: 5 (lower is better)
Translates to: TECLPCQAEFWALGIQLGRPPKG*TNRSNR
Trigger: CCGGTTGCTTCTATTGGTCAATCCCTTTGGGGGTCG...TCCCAGCTGTATCCCGAGCGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CAA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCGAGTGTAGAGCTGCCTaGGGAGAGCCAGGAGGTGAA +
Preference number: 5 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTECRAA*GEPGGE
Trigger: TTCACCTCCTGGCTCTCCCAAGGCAGCTCTACACTC...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp TCCAGCATCACGTCTGGTCCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGCGGCGGGTACCAAGCTaGTTTAGTTTCAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: SSITSGPMKASAILRRGQRRVPS*FSFRAP
Trigger: GGGAGCCCTGAAACTAAACAAGCTTGGTACCCGCCG...CTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGGACCAGACGTGATGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp CCAGTACATTCCAGGTCCTGTCATTGGGCGACGCGTAAAATAGACTCCGCCCTCCAGGCCCCGCCCTCATaGATCAGGCACTACCCTCGG +
Preference number: 5 (lower is better)
Translates to: PVHSRSCHWATRKIDSALQAPPS*IRHYPR
Trigger: CCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTG...GAGGGCGGAGTCTATTTTACGCGTCGCCCAATGACAGGACCTGGAATGTACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp GATCAGACGCCAGGCCCCGCCCTCATTGATCAGGCACTACCCTCGGGACGAGCCCAATTGCTTTTTAGATaGGGGACGGAGGACGCGCAT +
Preference number: 5 (lower is better)
Translates to: DQTPGPALIDQALPSGRAQLLFR*GTEDAH
Trigger: ATGCGCGTCCTCCGTCCCCAATCTAAAAAGCAATTG...GGCTCGTCCCGAGGGTAGTGCCTGATCAATGAGGGCGGGGCCTGGCGTCTGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS GCA 90 bp CAGCTCTTAAGTAGGACTTCCCAAGCAGCGGCTGCGCCTACGAAGTaGAGCGCGAGATCAGGGAGCGGTGAACCTGATAAGGAAACGCCC +
Preference number: 5 (lower is better)
Translates to: QLLSRTSQAAAAPTK*SARSGSGEPDKETP
Trigger: GGGCGTTTCCTTATCAGGTTCACCGCTCCCTGATCTCGCGCTGCACTTCGTAGGCGCAGCCGCTGCTTGGGAAGTCCTACTTAAGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598088.5
CDS CCA 90 bp TCTCCATCCATTGGTCCCCAATCCATAGGCCTGCGTGTCTGGCCCTaGGCCCCCAAACCGCCATCCGCACTCTTATTTCCAGAACCCAGT +
Preference number: 5 (lower is better)
Translates to: SPSIGPQSIGLRVWP*APKPPSALLFPEPS
Trigger: ACTGGGTTCTGGAAATAAGAGTGCGGATGGCGGTTTGGGGGCCCAGGGCCAGACACGCAGGCCTATGGATTGGGGACCAATGGATGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593308.1
ENST00000599033.1
CDS-3UTR CAA 90 bp CAAAAATGTCCAGGAGCTGGGGGTGAGCATCCCACAGGCAGGCTGATTTACTTGGGCCTGGCTTCAGGTTaGGGGCGCAGCCGCTGTATG +
Preference number: 5 (lower is better)
Translates to: QKCPGAGGEHPTGRLIYLGLASG*GRSRCM
Trigger: CATACAGCGGCTGCGCCCCAAACCTGAAGCCAGGCC...CAAGTAAATCAGCCTGCCTGTGGGATGCTCACCCCCAGCTCCTGGACATTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS-3UTR CAA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCCGACCCCCAAAGGGATaGACCAATAGAAGCAACCGG +
Preference number: 5 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTRPPKG*TNRSNR
Trigger: CCGGTTGCTTCTATTGGTCAATCCCTTTGGGGGTCG...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS CCA 90 bp AAAGACACAGCTGCCTATGGAGGAAATTCTGCAGAGACACCAAGGTaGCTCCAGGATAGAGCAGCTGCCCAGCACCTCACCCCCATCCCC +
Preference number: 5 (lower is better)
Translates to: KDTAAYGGNSAETPR*LQDRAAAQHLTPIP
Trigger: GGGGATGGGGGTGAGGTGCTGGGCAGCTGCTCTATCCTGGAGCCACCTTGGTGTCTCTGCAGAATTTCCTCCATAGGCAGCTGTGTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598574.1
CDS-3UTR CAA 90 bp ACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCTTCCACGGCGGGTACCAAGCTaGTTTAGTTTCAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: TTLGTSPFLFNRDDAHLPRRVPS*FSFRAP
Trigger: GGGAGCCCTGAAACTAAACAAGCTTGGTACCCGCCG...TGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp AGCGTCAGGACTGAGCCCTGCCCCGTAAGGGCGGCCCCAGATCAGACGCCAGGCAAGCGACTGCCTTTATaGCATAGACCTTTTCAATTG +
Preference number: 5 (lower is better)
Translates to: SVRTEPCPVRAAPDQTPGKRLPL*HRPFQL
Trigger: CAATTGAAAAGGTCTATGCAATAAAGGCAGTCGCTT...GCCTGGCGTCTGATCTGGGGCCGCCCTTACGGGGCAGGGCTCAGTCCTGACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS GCA 90 bp GCGGGACAGAGGCCAGCATCCCAGAGGGGGCCGGAGACCCGGGCATaGAAACATCCAATCATTTATTCCCCAGTAAGTATTCAGTACCCT +
Preference number: 5 (lower is better)
Translates to: AGQRPASQRGPETRA*KHPIIYSPVSIQYP
Trigger: AGGGTACTGAATACTTACTGGGGAATAAATGATTGGATGTTTGCATGCCCGGGTCTCCGGCCCCCTCTGGGATGCTGGCCTCTGTCCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598574.1
ENST00000599029.2
CDS CCA 90 bp CATCTGCTGGTCCTCTGCTCTGTTACATCAACGGGACCCTGGCCCTaGGTCTTAAGCCATAGTAGGCTGGTAGGAGCAAGGAGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: HLLVLCSVTSTGPWP*VLSHSRLVGARSQV
Trigger: GACCTGACTCCTTGCTCCTACCAGCCTACTATGGCTTAAGACCCAGGGCCAGGGTCCCGTTGATGTAACAGAGCAGAGGACCAGCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000600537.5
ENST00000601712.5
CDS CCA 90 bp GTCCAGGACGTCTGCTTCACCCCCAAACCTGCCCTGGCCCCATTATaGGAACCTCAAATCAGGTTCAAGCACAGAGCCCTAGATGTCCTC +
Preference number: 5 (lower is better)
Translates to: VQDVCFTPKPALAPL*EPQIRFKHRALDVL
Trigger: GAGGACATCTAGGGCTCTGTGCTTGAACCTGATTTGAGGTTCCCATAATGGGGCCAGGGCAGGTTTGGGGGTGAAGCAGACGTCCTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593308.1
ENST00000599033.1
CDS-3UTR CAA 90 bp CCGGCCGACTCACTGAGGCCTACCCCAGCCAGTACATTCCAGGTCCTGTCATTGCAATTGCTTTTTAGATaGGGGACGGAGGACGCGCAT +
Preference number: 5 (lower is better)
Translates to: PADSLRPTPASTFQVLSLQLLFR*GTEDAH
Trigger: ATGCGCGTCCTCCGTCCCCAATCTAAAAAGCAATTG...CAATGACAGGACCTGGAATGTACTGGCTGGGGTAGGCCTCAGTGAGTCGGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCCAATTGCTTTTTAGATaGGGGACGGAGGACGCGCAT +
Preference number: 5 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTQLLFR*GTEDAH
Trigger: ATGCGCGTCCTCCGTCCCCAATCTAAAAAGCAATTG...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS GCA 90 bp CTGCTGCTCCTCTGCTTCAAGGTGTCCATTCATCTGCTGGTCCTCTaGTCTGTTACATCAACGGGACCCTGGCCCTGGGTCTTAAGCCAT +
Preference number: 5 (lower is better)
Translates to: LLLLCFKVSIHLLVL*SVTSTGPWPWVLSH
Trigger: ATGGCTTAAGACCCAGGGCCAGGGTCCCGTTGATGTAACAGAGCAGAGGACCAGCAGATGAATGGACACCTTGAAGCAGAGGAGCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000600537.5
ENST00000601712.5
CDS-3UTR CAA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCACGACCCCCAAAGGGATaGACCAATAGAAGCAACCGG +
Preference number: 5 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPRPPKG*TNRSNR
Trigger: CCGGTTGCTTCTATTGGTCAATCCCTTTGGGGGTCG...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp CCCATGAAAGCGAGCGCAATCCTGAGACGGGGCCAGGGCCCCTGCCACCACAACAAGCGACTGCCTTTATaGCATAGACCTTTTCAATTG +
Preference number: 5 (lower is better)
Translates to: PMKASAILRRGQGPCHHNKRLPL*HRPFQL
Trigger: CAATTGAAAAGGTCTATGCAATAAAGGCAGTCGCTT...GTTGTGGTGGCAGGGGCCCTGGCCCCGTCTCAGGATTGCGCTCGCTTTCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS-3UTR CAA 90 bp CCATTTCTCTTTAACCGTGACGACGCCCACCTTCCAGCATCACGTCTGGTCCCATCTTGGACGTTGCGCTaGTTCCTGCGCTCTATGCTC +
Preference number: 5 (lower is better)
Translates to: PFLFNRDDAHLPASRLVPSWTLR*FLRSML
Trigger: GAGCATAGAGCGCAGGAACAAGCGCAACGTCCAAGA...TGGGACCAGACGTGATGCTGGAAGGTGGGCGTCGTCACGGTTAAAGAGAAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS-3UTR CAA 90 bp CTACAATTCACTGAGTGCCTCCCATGCCAGGCAGAGTTCTGGGCGCTCGGGATAGGCAGGCTGATTTACTaGACTGACTGTGGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: LQFTECLPCQAEFWALGIGRLIY*TDCGFG
Trigger: GCCAAACCCACAGTCAGTCAAGTAAATCAGCCTGCC...TATCCCGAGCGCCCAGAACTCTGCCTGGCATGGGAGGCACTCAGTGAATTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601712.5
CDS CCA 90 bp TCCATTCATCTGCTGGTCCTCTGCTCTGTTACATCAACGGGACCCTaGCCCTGGGTCTTAAGCCATAGTAGGCTGGTAGGAGCAAGGAGT +
Preference number: 5 (lower is better)
Translates to: SIHLLVLCSVTSTGP*PWVLSHSRLVGARS
Trigger: ACTCCTTGCTCCTACCAGCCTACTATGGCTTAAGACCCAGGGCCAGGGTCCCGTTGATGTAACAGAGCAGAGGACCAGCAGATGAATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000600537.5
ENST00000601712.5
CDS TCA 90 bp CACGTCAGGGACCCTATCCTCCCACCGCCTCCGTTAACACGATCCTaGATAAATCTTGAGAACCCCAGAGCCAGCTGTTGTGGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: HVRDPILPPPPLTRS*INLENPRASCCGRR
Trigger: TCTTCTTCCACAACAGCTGGCTCTGGGGTTCTCAAGATTTATTCAGGATCGTGTTAACGGAGGCGGTGGGAGGATAGGGTCCCTGACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597434.5
ENST00000599029.2
CDS-3UTR CAA 90 bp CAGGCACTACCCTCGGGACGAGCCCATTTCTCTTTAACCGTGACGACGCCCACCAAGCGACTGCCTTTATaGCATAGACCTTTTCAATTG +
Preference number: 5 (lower is better)
Translates to: QALPSGRAHFSLTVTTPTKRLPL*HRPFQL
Trigger: CAATTGAAAAGGTCTATGCAATAAAGGCAGTCGCTT...GGTGGGCGTCGTCACGGTTAAAGAGAAATGGGCTCGTCCCGAGGGTAGTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
CDS CCA 90 bp ATAGGAATAGATAAACAAGAGAAAGGATTGAAATATACAGGTGGTTaGGTGATGATAACGGGCTTTGGGGGAAAAGAAGGCACAGGAAGG +
Preference number: 5 (lower is better)
Translates to: IGIDKQEKGLKYTGG*VMITGFGGKEGTGR
Trigger: CCTTCCTGTGCCTTCTTTTCCCCCAAAGCCCGTTATCATCACCCAACCACCTGTATATTTCAATCCTTTCTCTTGTTTATCTATTCCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598574.1
ENST00000599029.2
CDS CCA 72 bp GCCGAGAGCTGGGCGGGGCCTCGCGCTTCGGGAGACTaGCCGCCATCGTGGGTGAGGGCCGACGCGCAGCGG +
Preference number: 6 (lower is better)
Translates to: AESWAGPRASGD*PPSWVRADAQR
Trigger: CCGCTGCGCGTCGGCCCTCACCCACGATGGCGGCCAGTCTCCCGAAGCGCGAGGCCCCGCCCAGCTCTCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597434.5
CDS TCA 72 bp GGCCTCGCGCTTCGGGAGACTGGCCGCCATCGTGGGTaGGGGCCGACGCGCAGCGGAGACGACGTCGCGGCC +
Preference number: 6 (lower is better)
Translates to: GLALRETGRHRG*GPTRSGDDVAA
Trigger: GGCCGCGACGTCGTCTCCGCTGCGCGTCGGCCCTCACCCACGATGGCGGCCAGTCTCCCGAAGCGCGAGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597434.5
CDS GCA 72 bp TCTCTTCGTAGGTGGCGGCCCCATCTGCCCGGAAGGTaGGAGTGGCTCTGCGCCGGGCCCCGCGCCGGCCCC +
Preference number: 6 (lower is better)
Translates to: SLRRWRPHLPGR*EWLCAGPRAGP
Trigger: GGGGCCGGCGCGGGGCCCGGCGCAGAGCCACTCGCACCTTCCGGGCAGATGGGGCCGCCACCTACGAAGAGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000245222.9
ENST00000597434.5
ENST00000598088.5
ENST00000598574.1
ENST00000599029.2
ENST00000599033.1
ENST00000599748.5
ENST00000600537.5
ENST00000601704.1
ENST00000601712.5
CDS CCA 72 bp GCGGGGCCTCGCGCTTCGGGAGACTGGCCGCCATCGTaGGTGAGGGCCGACGCGCAGCGGAGACGACGTCGC +
Preference number: 6 (lower is better)
Translates to: AGPRASGDWPPS*VRADAQRRRRR
Trigger: GCGACGTCGTCTCCGCTGCGCGTCGGCCCTCACCCACGATGGCGGCCAGTCTCCCGAAGCGCGAGGCCCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597434.5
CDS CAA 72 bp GGGCCCCCGTGCTGGTTCACTGCTCCGGCCAGCGCGTaGCCCGAGCCGCAGGGGAGGATGCCCACAGGCATC +
Preference number: 6 (lower is better)
Translates to: GPPCWFTAPASA*PEPQGRMPTGI
Trigger: GATGCCTGTGGGCATCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGGGGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597434.5
CDS TCA 72 bp CATCCCCGGGCAGTGGCAGTCCTCGGAGCAGACAGGTaGGGGCAGTGGCCCAGCGCTGGGCCTCGGCACGGT +
Preference number: 6 (lower is better)
Translates to: HPRAVAVLGADR*GQWPSAGPRHG
Trigger: ACCGTGCCGAGGCCCAGCGCTGGGCCACTGCCCTCACCTGTCTGCTCCGAGGACTGCCACTGCCCGGGGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000245222.9
ENST00000597434.5
ENST00000598088.5
ENST00000598574.1
ENST00000599029.2
ENST00000599748.5
ENST00000600537.5
ENST00000601712.5
CDS GCA 72 bp CTCGGCACGGTTCTCTTCGTAGGTGGCGGCCCCATCTaGCCGGAAGGTGCGAGTGGCTCTGCGCCGGGCCCC +
Preference number: 6 (lower is better)
Translates to: LGTVLFVGGGPI*PEGASGSAPGP
Trigger: GGGGCCCGGCGCAGAGCCACTCGCACCTTCCGGGCAGATGGGGCCGCCACCTACGAAGAGAACCGTGCCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000245222.9
ENST00000597434.5
ENST00000598088.5
ENST00000598574.1
ENST00000599029.2
ENST00000599033.1
ENST00000599748.5
ENST00000600537.5
ENST00000601704.1
ENST00000601712.5
CDS CAA 90 bp TCCTCCCGCGGGCCCCCGTGCTGGTTCACTGCTCCGGCCAGCGCGTaGCCCGAGCCGCAGGGGAGGATGCCCACAGGCATCTTCACAGCT +
Preference number: 6 (lower is better)
Translates to: SSRGPPCWFTAPASA*PEPQGRMPTGIFTA
Trigger: AGCTGTGAAGATGCCTGTGGGCATCCTCCCCTGCGGCTCGGGCAACGCGCTGGCCGGAGCAGTGAACCAGCACGGGGGCCCGCGGGAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597434.5
CDS GCA 72 bp AGGCCGCTGAGTCTGAGGGGCTGCGGCTTCGCAGGGTaGAGCAGCCTGAGACCTCGGCCAACGGGACCAGGC +
Preference number: 6 (lower is better)
Translates to: RPLSLRGCGFAG*SSLRPRPTGPG
Trigger: GCCTGGTCCCGTTGGCCGAGGTCTCAGGCTGCTGCACCCTGCGAAGCCGCAGCCCCTCAGACTCAGCGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000245222.9
ENST00000597434.5
ENST00000598088.5
ENST00000598574.1
ENST00000599029.2
ENST00000599033.1
ENST00000599748.5
ENST00000600537.5
ENST00000601704.1
ENST00000601712.5
CDS CCA 72 bp ACGGGACCAGGCCACCCCGGGGCCTGGCTTCAGGTTTaGGGCGCAGCCGCTGTATGTGCAGGGCCTGCGATG +
Preference number: 6 (lower is better)
Translates to: TGPGHPGAWLQV*GAAAVCAGPAM
Trigger: CATCGCAGGCCCTGCACATACAGCGGCTGCGCCCCAAACCTGAAGCCAGGCCCCGGGGTGGCCTGGTCCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000245222.9
ENST00000593308.1
ENST00000597434.5
ENST00000598088.5
ENST00000598574.1
ENST00000599029.2
ENST00000599748.5
ENST00000601704.1
ENST00000601712.5
CDS CCA 72 bp CCCAGCGCTGGGCCTCGGCACGGTTCTCTTCGTAGGTaGCGGCCCCATCTGCCCGGAAGGTGCGAGTGGCTC +
Preference number: 6 (lower is better)
Translates to: PSAGPRHGSLRR*RPHLPGRCEWL
Trigger: GAGCCACTCGCACCTTCCGGGCAGATGGGGCCGCCACCTACGAAGAGAACCGTGCCGAGGCCCAGCGCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000245222.9
ENST00000597434.5
ENST00000598088.5
ENST00000598574.1
ENST00000599029.2
ENST00000599748.5
ENST00000600537.5
ENST00000601704.1
ENST00000601712.5
CDS CCA 72 bp ACGGGACCAGGCCACCCCGGGGCCTGGCTTCAGGTTTaGGGCGCAGCCGCTGTATGTGCAGGGCCTGGTCCT +
Preference number: 6 (lower is better)
Translates to: TGPGHPGAWLQV*GAAAVCAGPGP
Trigger: AGGACCAGGCCCTGCACATACAGCGGCTGCGCCCCAAACCTGAAGCCAGGCCCCGGGGTGGCCTGGTCCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600537.5
CDS GCA 72 bp GGCAGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTaGTGGAAGTGCTGGAGTCTGAGTCCTCCCGCGGGC +
Preference number: 6 (lower is better)
Translates to: GSSGLSSIEGRR*WKCWSLSPPAG
Trigger: GCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGAGCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597434.5
ENST00000599029.2
CDS GCA 72 bp GGGCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTaGTGGAGTCTGAGTCCTCCCGCGGGCCCCCGTGCT +
Preference number: 6 (lower is better)
Translates to: GLSSIEGRRCWK*WSLSPPAGPRA
Trigger: AGCACGGGGGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597434.5
CDS CCA 72 bp ATGGCCTTAGCCCTGACCAGGGTGCTCCTAGGCCCGTaGCCCCAGCTCCCGGTCAGCTCCTGGTCTGGCCTC +
Preference number: 6 (lower is better)
Translates to: MALALTRVLLGP*PQLPVSSWSGL
Trigger: GAGGCCAGACCAGGAGCTGACCGGGAGCTGGGGCCACGGGCCTAGGAGCACCCTGGTCAGGGCTAAGGCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000245222.9
ENST00000593308.1
ENST00000598088.5
ENST00000598574.1
ENST00000599029.2
ENST00000599748.5
ENST00000601704.1
CDS CCA 72 bp ACGGGACCAGGCCACCCCGGGGCCTGGCTTCAGGTTTaGGGCGCAGCCGCTGTATGTGCAGGGCCCTTAGGA +
Preference number: 6 (lower is better)
Translates to: TGPGHPGAWLQV*GAAAVCAGPLG
Trigger: TCCTAAGGGCCCTGCACATACAGCGGCTGCGCCCCAAACCTGAAGCCAGGCCCCGGGGTGGCCTGGTCCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599033.1
CDS CCA 72 bp AGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTaGAAGTGCTGGAGTCTGAGTCCTCCCGCGGGCCCC +
Preference number: 6 (lower is better)
Translates to: SSGLSSIEGRRC*KCWSLSPPAGP
Trigger: GGGGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597434.5
CDS TCA 72 bp TTCAGGGCTCCCGCCCCGGGCAGCCAGGAGGCCCAGTaGGCAGTGTACCGATGCCAGGGTGCATCTGTGCCT +
Preference number: 6 (lower is better)
Translates to: FRAPAPGSQEAQ*AVYRCQGASVP
Trigger: AGGCACAGATGCACCCTGGCATCGGTACACTGCTCACTGGGCCTCCTGGCTGCCCGGGGCGGGAGCCCTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000599748.5
ENST00000600537.5
CDS GCA 72 bp GGGCTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTaGTGGAGTCTGAGTCCTCCCGCGGGCGATGCCAGG +
Preference number: 6 (lower is better)
Translates to: GLSSIEGRRCWK*WSLSPPAGDAR
Trigger: CCTGGCATCGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599029.2
CDS CCA 72 bp ACGGCCTGGGTAGGGCCAGAGAGGCCCCCGACGTGCTaGCCCTTCCCTCTTGGACGTTGCGCTTGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: TAWVGPERPPTC*PFPLGRCACSC
Trigger: GCAGGAACAAGCGCAACGTCCAAGAGGGAAGGGCCAGCACGTCGGGGGCCTCTCTGGCCCTACCCAGGCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS CCA 72 bp ATGGCCTTAGCCCTGACCAGGGTGCTCCTAGGCCCGTaGCCCCAGCTCCCGGTCAGCTCCTGGTCTGGCCTA +
Preference number: 6 (lower is better)
Translates to: MALALTRVLLGP*PQLPVSSWSGL
Trigger: TAGGCCAGACCAGGAGCTGACCGGGAGCTGGGGCCACGGGCCTAGGAGCACCCTGGTCAGGGCTAAGGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597434.5
CDS CCA 72 bp CTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTaGAGTCTGAGTCCTCCCGCGGGCCCCCGTGCTGGT +
Preference number: 6 (lower is better)
Translates to: LSSIEGRRCWKC*SLSPPAGPRAG
Trigger: ACCAGCACGGGGGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597434.5
CDS GCA 72 bp AACACGGCCTGGGTAGGGCCAGAGAGGCCCCCGACGTaGTGGCCCTTCCCTCTTGGACGTTGCGCTTGTTCC +
Preference number: 6 (lower is better)
Translates to: NTAWVGPERPPT*WPFPLGRCACS
Trigger: GGAACAAGCGCAACGTCCAAGAGGGAAGGGCCAGCACGTCGGGGGCCTCTCTGGCCCTACCCAGGCCGTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS CCA 72 bp CTGTCGTCCATAGAGGGCAGGCGCTGCTGGAAGTGCTaGAGTCTGAGTCCTCCCGCGGGCGATGCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: LSSIEGRRCWKC*SLSPPAGDARV
Trigger: CACCCTGGCATCGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599029.2
CDS CCA 72 bp AGCTCCGGGCTGTCGTCCATAGAGGGCAGGCGCTGCTaGAAGTGCTGGAGTCTGAGTCCTCCCGCGGGCGAT +
Preference number: 6 (lower is better)
Translates to: SSGLSSIEGRRC*KCWSLSPPAGD
Trigger: ATCGCCCGCGGGAGGACTCAGACTCCAGCACTTCCAGCAGCGCCTGCCCTCTATGGACGACAGCCCGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599029.2
CDS CAA 90 bp AGGGCCAGAGAGGCCCCCGACGTGCTGGCCCTTCCCTCTTGGACGTaGCGCTTGTTCCTGCGCTCTATGCTCTCTGCCGTTATCGCCCGG +
Preference number: 6 (lower is better)
Translates to: RAREAPDVLALPSWT*RLFLRSMLSAVIAR
Trigger: CCGGGCGATAACGGCAGAGAGCATAGAGCGCAGGAACAAGCGCAACGTCCAAGAGGGAAGGGCCAGCACGTCGGGGGCCTCTCTGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS CCA 72 bp CGATGTAAGGGTGAGGGCAAAGCGTGGGCCTCGGGCTaGGTAGGAGCCAAACTCGCCATGGAGGAGCGGGGT +
Preference number: 6 (lower is better)
Translates to: RCKGEGKAWASG*VGAKLAMEERG
Trigger: ACCCCGCTCCTCCATGGCGAGTTTGGCTCCTACCCAGCCCGAGGCCCACGCTTTGCCCTCACCCTTACATCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000245222.9
ENST00000593308.1
ENST00000597434.5
ENST00000598088.5
ENST00000598574.1
ENST00000599029.2
ENST00000599748.5
ENST00000601704.1
ENST00000601712.5
CDS CCA 72 bp GTGCAGGGCCTGCGATGTAAGGGTGAGGGCAAAGCGTaGGCCTCGGGCTGGGTAGGAGCCAAACTCGCCATG +
Preference number: 6 (lower is better)
Translates to: VQGLRCKGEGKA*ASGWVGAKLAM
Trigger: CATGGCGAGTTTGGCTCCTACCCAGCCCGAGGCCCACGCTTTGCCCTCACCCTTACATCGCAGGCCCTGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000245222.9
ENST00000593308.1
ENST00000597434.5
ENST00000598088.5
ENST00000598574.1
ENST00000599029.2
ENST00000599748.5
ENST00000601704.1
ENST00000601712.5
CDS CAA 72 bp GGCCAGAGAGGCCCCCGACGTGCTGGCCCTTCCCTCTaGGACGTTGCGCTTGTTCCTGCGCTCTATGCTCTC +
Preference number: 6 (lower is better)
Translates to: GQRGPRRAGPSL*DVALVPALYAL
Trigger: GAGAGCATAGAGCGCAGGAACAAGCGCAACGTCCAAGAGGGAAGGGCCAGCACGTCGGGGGCCTCTCTGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS CCA 72 bp GCCAGAGAGGCCCCCGACGTGCTGGCCCTTCCCTCTTaGACGTTGCGCTTGTTCCTGCGCTCTATGCTCTCT +
Preference number: 6 (lower is better)
Translates to: AREAPDVLALPS*TLRLFLRSMLS
Trigger: AGAGAGCATAGAGCGCAGGAACAAGCGCAACGTCCAAGAGGGAAGGGCCAGCACGTCGGGGGCCTCTCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS CCA 72 bp ATCCCTTTCTTCCGGAAAGCTATCGAGAACACGGCCTaGGTAGGGCCAGAGAGGCCCCCGACGTGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: IPFFRKAIENTA*VGPERPPTCWP
Trigger: GGGCCAGCACGTCGGGGGCCTCTCTGGCCCTACCCAGGCCGTGTTCTCGATAGCTTTCCGGAAGAAAGGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS CCA 72 bp TGGGTCCCCGAGACCTGGACCTGGGTCTCCATCCATTaGTCCCCAATCCATAGGCCTGCGTGTCTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: WVPETWTWVSIH*SPIHRPACLAL
Trigger: CAGGGCCAGACACGCAGGCCTATGGATTGGGGACCAATGGATGGAGACCCAGGTCCAGGTCTCGGGGACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593308.1
ENST00000599033.1
CDS CAA 72 bp GAGGCCCCCGACGTGCTGGCCCTTCCCTCTTGGACGTaGCGCTTGTTCCTGCGCTCTATGCTCTCTGCCGTT +
Preference number: 6 (lower is better)
Translates to: EAPDVLALPSWT*RLFLRSMLSAV
Trigger: AACGGCAGAGAGCATAGAGCGCAGGAACAAGCGCAACGTCCAAGAGGGAAGGGCCAGCACGTCGGGGGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS CAA 90 bp AGAGAGGCCCCCGACGTGCTGGCCCTTCCCTCTTGGACGTTGCGCTaGTTCCTGCGCTCTATGCTCTCTGCCGTTATCGCCCGGCTAGTC +
Preference number: 6 (lower is better)
Translates to: REAPDVLALPSWTLR*FLRSMLSAVIARLV
Trigger: GACTAGCCGGGCGATAACGGCAGAGAGCATAGAGCGCAGGAACAAGCGCAACGTCCAAGAGGGAAGGGCCAGCACGTCGGGGGCCTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS GCA 72 bp AGGCCCCCGACGTGCTGGCCCTTCCCTCTTGGACGTTaGGCTTGTTCCTGCGCTCTATGCTCTCTGCCGTTA +
Preference number: 6 (lower is better)
Translates to: RPPTCWPFPLGR*ACSCALCSLPL
Trigger: TAACGGCAGAGAGCATAGAGCGCAGGAACAAGCGCAACGTCCAAGAGGGAAGGGCCAGCACGTCGGGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS GCA 72 bp CTGGCCCAGGTTTTCCATTTCCATCTCCCACCCCGGTaGCCCAGTCCCGGGCCTGAGTCTCTGTTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: LAQVFHFHLPPR*PSPGPESLFLL
Trigger: CAAGAGGAACAGAGACTCAGGCCCGGGACTGGGGCACCGGGGTGGGAGATGGAAATGGAAAACCTGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593308.1
ENST00000599033.1
CDS CCA 72 bp AGGCTGGTAGGAGCAAGGAGTCAGGTCTCACTGTCCTaGCCTGACCTTCAGCTCTCCAACACTGGGCCCGCC +
Preference number: 6 (lower is better)
Translates to: RLVGARSQVSLS*PDLQLSNTGPA
Trigger: GGCGGGCCCAGTGTTGGAGAGCTGAAGGTCAGGCCAGGACAGTGAGACCTGACTCCTTGCTCCTACCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000600537.5
ENST00000601712.5
CDS CCA 72 bp CCATCCATTGGTCCCCAATCCATAGGCCTGCGTGTCTaGCCCTGGGCCCCCAAACCGCCATCCGCACTCTTA +
Preference number: 6 (lower is better)
Translates to: PSIGPQSIGLRV*PWAPKPPSALL
Trigger: TAAGAGTGCGGATGGCGGTTTGGGGGCCCAGGGCCAGACACGCAGGCCTATGGATTGGGGACCAATGGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593308.1
ENST00000599033.1
CDS CCA 72 bp AAGCACAGAGCCCTAGATGTCCTCCAGTCTTGGGCCTaGGTCTCTGTCCCTGGGTCCCCGAGACCTGGACCT +
Preference number: 6 (lower is better)
Translates to: KHRALDVLQSWA*VSVPGSPRPGP
Trigger: AGGTCCAGGTCTCGGGGACCCAGGGACAGAGACCCAGGCCCAAGACTGGAGGACATCTAGGGCTCTGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593308.1
ENST00000599033.1
CDS CAA 72 bp CCCGACGTGCTGGCCCTTCCCTCTTGGACGTTGCGCTaGTTCCTGCGCTCTATGCTCTCTGCCGTTATCGCC +
Preference number: 6 (lower is better)
Translates to: PDVLALPSWTLR*FLRSMLSAVIA
Trigger: GGCGATAACGGCAGAGAGCATAGAGCGCAGGAACAAGCGCAACGTCCAAGAGGGAAGGGCCAGCACGTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340932.7
CDS GCA 72 bp TCAGAGATCATGGGAAGCACGTGGTTCTTACACCACTaGCAGGCCAGGCCCCGACCCCCAAAGGGATTGACC +
Preference number: 6 (lower is better)
Translates to: SEIMGSTWFLHH*QARPRPPKGLT
Trigger: GGTCAATCCCTTTGGGGGTCGGGGCCTGGCCTGGCAGTGGTGTAAGAACCACGTGCTTCCCATGATCTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000426514.2
ENST00000597434.5
ENST00000598088.5
ENST00000599029.2
ENST00000599748.5
ENST00000600537.5
ENST00000601712.5
CDS GCA 72 bp AGTAGGACTTCCCAAGCAGCGGCTGCGCCTACGAAGTaGAGCGCGAGATCAGGGAGCGGTGAACCTGATAAG +
Preference number: 6 (lower is better)
Translates to: SRTSQAAAAPTK*SARSGSGEPDK
Trigger: CTTATCAGGTTCACCGCTCCCTGATCTCGCGCTGCACTTCGTAGGCGCAGCCGCTGCTTGGGAAGTCCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598088.5
CDS CCA 72 bp ATTGGTCCCCAATCCATAGGCCTGCGTGTCTGGCCCTaGGCCCCCAAACCGCCATCCGCACTCTTATTTCCA +
Preference number: 6 (lower is better)
Translates to: IGPQSIGLRVWP*APKPPSALLFP
Trigger: TGGAAATAAGAGTGCGGATGGCGGTTTGGGGGCCCAGGGCCAGACACGCAGGCCTATGGATTGGGGACCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593308.1
ENST00000599033.1
CDS CCA 72 bp GGGAGCGGTGAACCTGATAAGGAAACGCCCGAAGCGTaGGGTCGGAAATTTCCAGATGCCCCGACTAGCCCT +
Preference number: 6 (lower is better)
Translates to: GSGEPDKETPEA*GRKFPDAPTSP
Trigger: AGGGCTAGTCGGGGCATCTGGAAATTTCCGACCCCACGCTTCGGGCGTTTCCTTATCAGGTTCACCGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598088.5
CDS CCA 72 bp GGGTCCAGGACGTCTGCTTCACCCCCAAACCTGCCCTaGCCCCATTATGGGAACCTCAAATCAGGTTCAAGC +
Preference number: 6 (lower is better)
Translates to: GSRTSASPPNLP*PHYGNLKSGSS
Trigger: GCTTGAACCTGATTTGAGGTTCCCATAATGGGGCCAGGGCAGGTTTGGGGGTGAAGCAGACGTCCTGGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593308.1
ENST00000599033.1
CDS GCA 72 bp CTCTGCTTCAAGGTGTCCATTCATCTGCTGGTCCTCTaGTCTGTTACATCAACGGGACCCTGGCCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: LCFKVSIHLLVL*SVTSTGPWPWV
Trigger: GACCCAGGGCCAGGGTCCCGTTGATGTAACAGAGCAGAGGACCAGCAGATGAATGGACACCTTGAAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000600537.5
ENST00000601712.5
CDS CCA 72 bp GTCCTCTGCTCTGTTACATCAACGGGACCCTGGCCCTaGGTCTTAAGCCATAGTAGGCTGGTAGGAGCAAGG +
Preference number: 6 (lower is better)
Translates to: VLCSVTSTGPWP*VLSHSRLVGAR
Trigger: CCTTGCTCCTACCAGCCTACTATGGCTTAAGACCCAGGGCCAGGGTCCCGTTGATGTAACAGAGCAGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000600537.5
ENST00000601712.5
CDS CCA 72 bp CTGCTGGTCCTCTGCTCTGTTACATCAACGGGACCCTaGCCCTGGGTCTTAAGCCATAGTAGGCTGGTAGGA +
Preference number: 6 (lower is better)
Translates to: LLVLCSVTSTGP*PWVLSHSRLVG
Trigger: TCCTACCAGCCTACTATGGCTTAAGACCCAGGGCCAGGGTCCCGTTGATGTAACAGAGCAGAGGACCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245222.9
ENST00000340932.7
ENST00000598088.5
ENST00000600537.5
ENST00000601712.5
CDS CCA 72 bp GTCTGCTTCACCCCCAAACCTGCCCTGGCCCCATTATaGGAACCTCAAATCAGGTTCAAGCACAGAGCCCTA +
Preference number: 6 (lower is better)
Translates to: VCFTPKPALAPL*EPQIRFKHRAL
Trigger: TAGGGCTCTGTGCTTGAACCTGATTTGAGGTTCCCATAATGGGGCCAGGGCAGGTTTGGGGGTGAAGCAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593308.1
ENST00000599033.1
CDS GCA 72 bp AGGCCAGCATCCCAGAGGGGGCCGGAGACCCGGGCATaGAAACATCCAATCATTTATTCCCCAGTAAGTATT +
Preference number: 6 (lower is better)
Translates to: RPASQRGPETRA*KHPIIYSPVSI
Trigger: AATACTTACTGGGGAATAAATGATTGGATGTTTGCATGCCCGGGTCTCCGGCCCCCTCTGGGATGCTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598574.1
ENST00000599029.2
CDS TCA 72 bp CCCACCGCCTCCGTTAACACGATCCTGAATAAATCTTaGGAACCCCAGAGCCAGCTGTTGTGGAAGAAGAGG +
Preference number: 6 (lower is better)
Translates to: PTASVNTILNKS*EPQSQLLWKKR
Trigger: CCTCTTCTTCCACAACAGCTGGCTCTGGGGTTCTCAAGATTTATTCAGGATCGTGTTAACGGAGGCGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597434.5
ENST00000599029.2
CDS TCA 72 bp GACCCTATCCTCCCACCGCCTCCGTTAACACGATCCTaGATAAATCTTGAGAACCCCAGAGCCAGCTGTTGT +
Preference number: 6 (lower is better)
Translates to: DPILPPPPLTRS*INLENPRASCC
Trigger: ACAACAGCTGGCTCTGGGGTTCTCAAGATTTATTCAGGATCGTGTTAACGGAGGCGGTGGGAGGATAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597434.5
ENST00000599029.2
CDS CAA 90 bp CCCCAAATCCTTGCCTTCATAGGAATAGATAAACAAGAGAAAGGATaGAAATATACAGGTGGTTGGGTGATGATAACGGGCTTTGGGGGA +
Preference number: 6 (lower is better)
Translates to: PQILAFIGIDKQEKG*KYTGGWVMITGFGG
Trigger: TCCCCCAAAGCCCGTTATCATCACCCAACCACCTGTATATTTCAATCCTTTCTCTTGTTTATCTATTCCTATGAAGGCAAGGATTTGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598574.1
ENST00000599029.2
CDS CCA 72 bp GATAAACAAGAGAAAGGATTGAAATATACAGGTGGTTaGGTGATGATAACGGGCTTTGGGGGAAAAGAAGGC +
Preference number: 6 (lower is better)
Translates to: DKQEKGLKYTGG*VMITGFGGKEG
Trigger: GCCTTCTTTTCCCCCAAAGCCCGTTATCATCACCCAACCACCTGTATATTTCAATCCTTTCTCTTGTTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598574.1
ENST00000599029.2