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Pregenerated sensors for SPDYC (Homo sapiens)

Ensembl gene IDs: ENSG00000204710

Ensembl transcript IDs: ENST00000377185.2

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GGGCACTTGGATGACACAGGCTTAAGCAAGTGGCTGCTGCAGTGCTaGGGCAAACCACAGGGGGAACAGTGGGGCGGCGAGAGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: GHLDDTGLSKWLLQC*GKPQGEQWGGERPG
Trigger: CCCTGGCCTCTCGCCGCCCCACTGTTCCCCCTGTGGTTTGCCCCAGCACTGCAGCAGCCACTTGCTTAAGCCTGTGTCATCCAAGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377185.2
CDS TCA 90 bp TTGCAAGGTACAGGGCCAAGAACAGGCTGCTGTGGGTATACTCGCTaGGCTTCAGGTGGGCGCGCTGGAAGTAGACCAGCACCATGGCCA +
Preference number: 5 (lower is better)
Translates to: LQGTGPRTGCCGYTR*ASGGRAGSRPAPWP
Trigger: TGGCCATGGTGCTGGTCTACTTCCAGCGCGCCCACCTGAAGCTCAGCGAGTATACCCACAGCAGCCTGTTCTTGGCCCTGTACCTTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377185.2
CDS TCA 90 bp GGAGGGAGGGCGATGACATTCAGAGGTCAGAGAAGGGCACTTGGATaGCACAGGCTTAAGCAAGTGGCTGCTGCAGTGCTGGGGCAAACC +
Preference number: 5 (lower is better)
Translates to: GGRAMTFRGQRRALG*HRLKQVAAAVLGQT
Trigger: GGTTTGCCCCAGCACTGCAGCAGCCACTTGCTTAAGCCTGTGTCATCCAAGTGCCCTTCTCTGACCTCTGAATGTCATCGCCCTCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377185.2
CDS GCA 90 bp ACAACAGCCCGGAAACCCATCCGTGCCCAAAGCTTATCCCTCTGGTaGAGGAATTTCCCCACTCGTAAACACCAATCTTTTCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: TTARKPIRAQSLSLW*RNFPTRKHQSFPRA
Trigger: GGCCCTGGGAAAAGATTGGTGTTTACGAGTGGGGAAATTCCTGCACCAGAGGGATAAGCTTTGGGCACGGATGGGTTTCCGGGCTGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377185.2
CDS CCA 90 bp CTCACAACAGCCCGGAAACCCATCCGTGCCCAAAGCTTATCCCTCTaGTGCAGGAATTTCCCCACTCGTAAACACCAATCTTTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: LTTARKPIRAQSLSL*CRNFPTRKHQSFPR
Trigger: CCTGGGAAAAGATTGGTGTTTACGAGTGGGGAAATTCCTGCACCAGAGGGATAAGCTTTGGGCACGGATGGGTTTCCGGGCTGTTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377185.2
CDS CCA 72 bp GTGGGGGCGCCGGTCCCGAGTCCAAGCCCAGTGGAATaGCTCCTTTGCCATGACCTCCTCACAGCACTGGCG +
Preference number: 6 (lower is better)
Translates to: VGAPVPSPSPVE*LLCHDLLTALA
Trigger: CGCCAGTGCTGTGAGGAGGTCATGGCAAAGGAGCCATTCCACTGGGCTTGGACTCGGGACCGGCGCCCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377185.2
CDS CCA 72 bp CCATGGTGGGGGCGCCGGTCCCGAGTCCAAGCCCAGTaGAATGGCTCCTTTGCCATGACCTCCTCACAGCAC +
Preference number: 6 (lower is better)
Translates to: PWWGRRSRVQAQ*NGSFAMTSSQH
Trigger: GTGCTGTGAGGAGGTCATGGCAAAGGAGCCATTCCACTGGGCTTGGACTCGGGACCGGCGCCCCCACCATGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377185.2
CDS GCA 72 bp TCCTCCAGAAGGCTGAGGAAGGCCTGGACCTCCTGGTaGTGGCGAAAACGGAGGAACCCATTGCCCCCACCT +
Preference number: 6 (lower is better)
Translates to: SSRRLRKAWTSW*WRKRRNPLPPP
Trigger: AGGTGGGGGCAATGGGTTCCTCCGTTTTCGCCAGCACCAGGAGGTCCAGGCCTTCCTCAGCCTTCTGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377185.2
CDS CCA 72 bp GATGACACAGGCTTAAGCAAGTGGCTGCTGCAGTGCTaGGGCAAACCACAGGGGGAACAGTGGGGCGGCGAG +
Preference number: 6 (lower is better)
Translates to: DDTGLSKWLLQC*GKPQGEQWGGE
Trigger: CTCGCCGCCCCACTGTTCCCCCTGTGGTTTGCCCCAGCACTGCAGCAGCCACTTGCTTAAGCCTGTGTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377185.2
CDS GCA 72 bp TGTTCTTCACCCTGCAGAGCTTCAGTGCCCAGGGCGTaGCGGAGGCTTTGGGAAGATGCGGAGGGAGTAGGT +
Preference number: 6 (lower is better)
Translates to: CSSPCRASVPRA*RRLWEDAEGVG
Trigger: ACCTACTCCCTCCGCATCTTCCCAAAGCCTCCGGCACGCCCTGGGCACTGAAGCTCTGCAGGGTGAAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377185.2
CDS TCA 72 bp ACAGGGCCAAGAACAGGCTGCTGTGGGTATACTCGCTaGGCTTCAGGTGGGCGCGCTGGAAGTAGACCAGCA +
Preference number: 6 (lower is better)
Translates to: TGPRTGCCGYTR*ASGGRAGSRPA
Trigger: TGCTGGTCTACTTCCAGCGCGCCCACCTGAAGCTCAGCGAGTATACCCACAGCAGCCTGTTCTTGGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377185.2
CDS GCA 72 bp GCACTGGCGGCTCACAACAGCCCGGAAACCCATCCGTaGCCAAAGCTTATCCCTCTGGTGCAGGAATTTCCC +
Preference number: 6 (lower is better)
Translates to: ALAAHNSPETHP*PKLIPLVQEFP
Trigger: GGGAAATTCCTGCACCAGAGGGATAAGCTTTGGGCACGGATGGGTTTCCGGGCTGTTGTGAGCCGCCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377185.2
CDS CCA 72 bp TCGTTTGCAAGGTACAGGGCCAAGAACAGGCTGCTGTaGGTATACTCGCTGAGCTTCAGGTGGGCGCGCTGG +
Preference number: 6 (lower is better)
Translates to: SFARYRAKNRLL*VYSLSFRWARW
Trigger: CCAGCGCGCCCACCTGAAGCTCAGCGAGTATACCCACAGCAGCCTGTTCTTGGCCCTGTACCTTGCAAACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377185.2
CDS CCA 72 bp CGGAGGCTTTGGGAAGATGCGGAGGGAGTAGGTGCCTaGTTCCAGTTGCATCTGGGGAGGCAAGACGATGAG +
Preference number: 6 (lower is better)
Translates to: RRLWEDAEGVGA*FQLHLGRQDDE
Trigger: CTCATCGTCTTGCCTCCCCAGATGCAACTGGAACCAGGCACCTACTCCCTCCGCATCTTCCCAAAGCCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377185.2
CDS CCA 72 bp TGGTGGGGTCTTGGGAGTCACTCATCTCATAGGAGATaGAGATGGGGCAGGGTGACCCGAGCTCAGGAATGG +
Preference number: 6 (lower is better)
Translates to: WWGLGSHSSHRR*RWGRVTRAQEW
Trigger: CCATTCCTGAGCTCGGGTCACCCTGCCCCATCTCCATCTCCTATGAGATGAGTGACTCCCAAGACCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377185.2
CDS GCA 72 bp CGGAAACCCATCCGTGCCCAAAGCTTATCCCTCTGGTaGAGGAATTTCCCCACTCGTAAACACCAATCTTTT +
Preference number: 6 (lower is better)
Translates to: RKPIRAQSLSLW*RNFPTRKHQSF
Trigger: AAAAGATTGGTGTTTACGAGTGGGGAAATTCCTGCACCAGAGGGATAAGCTTTGGGCACGGATGGGTTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377185.2