RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPARCL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000152583

Ensembl transcript IDs: ENST00000282470.11, ENST00000418378.5, ENST00000434434.5, ENST00000458304.2, ENST00000503414.5, ENST00000509407.5, ENST00000512317.5, ENST00000535835.5, ENST00000541496.1, ENST00000543631.5

Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCATATATTTCTGAAGTaGTTAGAACAGAGGAGGATG +
Preference number: 2 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAHIFLK*LEQRRM
Trigger: CATCCTCCTCTGTTCTAACCACTTCAGAAATATATG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
3UTR-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTCATATATTTCTGAAGTaGTTAGAACAGAGGAGGATG +
Preference number: 2 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIHIFLK*LEQRRM
Trigger: CATCCTCCTCTGTTCTAACCACTTCAGAAATATATG...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCAGGCTGGCCTCTCATaGGAGGGCTTTACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESQAGLS*EGFTGS
Trigger: ACTGCCTGTAAAGCCCTCGCATGAGAGGCCAGCCTG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR GCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTCATCACTTGCACTGTaGCTGGGGCCATCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESSSLAL*LGPSVP
Trigger: CGGCACTGATGGCCCCAGGCACAGTGCAAGTGATGA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCACTTGCACTGTGCCTaGGGCCATCAGTGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAHLHCA*GHQCRH
Trigger: ATGGCGGCACTGATGGCCCCAGGCACAGTGCAAGTG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCTGGGATTACAGATGTaGGCCACGGCTTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESLGLQM*ATASGQ
Trigger: TTGGCCAGAAGCCGTGGCTCACATCTGTAATCCCAG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503414.5
CDS-3UTR GCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTCATCACTTGCACTGTaGCTGGGGCCATCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHASSLAL*LGPSVP
Trigger: CGGCACTGATGGCCCCAGGCACAGTGCAAGTGATGA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCACTTGCACTGTGCCTaGGGCCATCAGTGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANHLHCA*GHQCRH
Trigger: ATGGCGGCACTGATGGCCCCAGGCACAGTGCAAGTG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTGCTTTCTTGGCCTCTTaGTGCTCTCCAGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESAFLAS*CSPGSV
Trigger: CACTGAGCCTGGAGAGCACCAAGAGGCCAAGAAAGC...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCCCACTCCTTCAGGGTaGTGTGCTTATCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESPTPSG*CAYPCW
Trigger: CCAACAAGGATAAGCACATCACCCTGAAGGAGTGGG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCAGGCTGGCCTCTCATaGGAGGGCTTTACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANQAGLS*EGFTGS
Trigger: ACTGCCTGTAAAGCCCTCGCATGAGAGGCCAGCCTG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR GCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTCATCACTTGCACTGTaGCTGGGGCCATCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANSSLAL*LGPSVP
Trigger: CGGCACTGATGGCCCCAGGCACAGTGCAAGTGATGA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTTCTTGGCCTCTTGGTaGTCTCCAGGCTCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESFLASW*SPGSVV
Trigger: TACCACTGAGCCTGGAGAGCACCAAGAGGCCAAGAA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTATTTCCCTAGCAGGCTaGCCTCTCATGCGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAISLAG*PLMRGL
Trigger: AAGCCCTCGCATGAGAGGCCAGCCTGCTAGGGAAAT...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTGCTTTCTTGGCCTCTTaGTGCTCTCCAGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAAFLAS*CSPGSV
Trigger: CACTGAGCCTGGAGAGCACCAAGAGGCCAAGAAAGC...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTGGAGGACAAGTCACTaGATCCTGGCAGACACAGTG +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESWRTSH*ILADTV
Trigger: CACTGTGTCTGCCAGGATCCAGTGACTTGTCCTCCA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTGCTCTTGGTTTCCTTaGTCCCTTAGGCCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESCSWFP*SLRPWL
Trigger: TAGCCAAGGCCTAAGGGATCAAGGAAACCAAGAGCA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAGGCCTGGCTTGGGATaGAGTAGTCATCACTTGCAC +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHARPGLG*SSHHLH
Trigger: GTGCAAGTGATGACTACTTCATCCCAAGCCAGGCCT...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCCCACTCCTTCAGGGTaGTGTGCTTATCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAPTPSG*CAYPCW
Trigger: CCAACAAGGATAAGCACATCACCCTGAAGGAGTGGG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTGCTTGCTGTTAGCATaGTCCCTGGGCAATTCTGTC +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESCLLLA*SLGNSV
Trigger: GACAGAATTGCCCAGGGAGCATGCTAACAGCAAGCA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTGAAGTAGTCATCACTTaGACTGTGCCTGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAEVVIT*TVPGAI
Trigger: GATGGCCCCAGGCACAGTGCAAGTGATGACTACTTC...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTTCTTGGCCTCTTGGTaGTCTCCAGGCTCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAFLASW*SPGSVV
Trigger: TACCACTGAGCCTGGAGAGCACCAAGAGGCCAAGAA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCCTTTTCACCGGGATTaGAGCTGCAGTTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAPFHRD*SCSSQE
Trigger: CTCTTGGGAACTGCAGCTGCAATCCCGGTGAAAAGG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTCCCTAGCAGGCTaGCCTCTCATGCGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANISLAG*PLMRGL
Trigger: AAGCCCTCGCATGAGAGGCCAGCCTGCTAGGGAAAT...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTGGAGGACAAGTCACTaGATCCTGGCAGACACAGTG +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAWRTSH*ILADTV
Trigger: CACTGTGTCTGCCAGGATCCAGTGACTTGTCCTCCA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTTATGCAGTGTTCCATaGGCACCAGAGATGCTCGCA +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESLCSVP*APEMLA
Trigger: TGCGAGCATCTCTGGTGCCCATGGAACACTGCATAA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTGCTCTTGGTTTCCTTaGTCCCTTAGGCCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHACSWFP*SLRPWL
Trigger: TAGCCAAGGCCTAAGGGATCAAGGAAACCAAGAGCA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACAGGCCTGGCTTGGGATaGAGTAGTCATCACTTGCAC +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANRPGLG*SSHHLH
Trigger: GTGCAAGTGATGACTACTTCATCCCAAGCCAGGCCT...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTCCTGGCAGACACAGTaGGGTTTTCCCTGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANSWQTQ*GFPCWS
Trigger: AGACCAACAGGGAAAACCTCACTGTGTCTGCCAGGA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTGCAGTGTTGTCAGGTaGTACCGTTTCAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHACSVVR*YRFSSW
Trigger: CCAACTGCTGAAACGGTAGCACCTGACAACACTGCA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTGTATTGTCTTCCTCCTaGTTGCTGTTAGCATGCTCC +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESVLSSS*LLLACS
Trigger: GGAGCATGCTAACAGCAAGCAGGAGGAAGACAATAC...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACGAAGTAGTCATCACTTaGACTGTGCCTGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANEVVIT*TVPGAI
Trigger: GATGGCCCCAGGCACAGTGCAAGTGATGACTACTTC...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTTTTCCCTGTTGGTCTaGCTTACAGATGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESFSLLV*LTDVAS
Trigger: AGAGGCCACATCTGTAAGGCAGACCAACAGGGAAAA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTGGGCTTTACAGGCAGTaGTTGCAAACCAAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESGLYRQ*LQTKRE
Trigger: TTCCCTTTTGGTTTGCAAGCACTGCCTGTAAAGCCC...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418378.5
CDS-3UTR CCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTTTGTTGCAGATTCCTaGATTTCCCTAGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESFVADS*ISLAGW
Trigger: CCAGCCTGCTAGGGAAATCCAGGAATCTGCAACAAA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTTCAATCCCAGCTCTTaGCTAGAACTCTTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESFNPSS*LELLPC
Trigger: ACAGGGCAAGAGTTCTAGCCAAGAGCTGGGATTGAA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCAGAAAGGCCTGGCTTaGGATGAAGTAGTCATCACT +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESQKGLA*DEVVIT
Trigger: AGTGATGACTACTTCATCCCAAGCCAGGCCTTTCTG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAGAAGATCAATGGGATaGTCCCCAGCCAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHARRSMG*SPAKSL
Trigger: GAGGCTTTTGGCTGGGGACCATCCCATTGATCTTCT...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCAACTAGTGGGGGTCTaGAGTGACAGACGAGAATTT +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAQLVGV*SDRREF
Trigger: AAATTCTCGTCTGTCACTTCAGACCCCCACTAGTTG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR TCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTCAGTGCCACAAACTTaGTCAAGGGGTTTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESSVPQT*SRGFVG
Trigger: TCCAACAAAACCCCTTGATCAAGTTTGTGGCACTGA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTGCAGTGTTGTCAGGTaGTACCGTTTCAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANCSVVR*YRFSSW
Trigger: CCAACTGCTGAAACGGTAGCACCTGACAACACTGCA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTGCTTGCTGTTAGCATaGTCCCTGGGCAATTCTGTC +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANCLLLA*SLGNSV
Trigger: GACAGAATTGCCCAGGGAGCATGCTAACAGCAAGCA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTGTATTGTCTTCCTCCTaGTTGCTGTTAGCATGCTCC +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAVLSSS*LLLACS
Trigger: GGAGCATGCTAACAGCAAGCAGGAGGAAGACAATAC...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCATGCACCCTCATGTTaGCTTCACTTGACGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAHAPSC*LHLTFP
Trigger: AGGAAACGTCAAGTGAAGGCAACATGAGGGTGCATG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTACACTGGAAGCTCATaGAAGAATCCACAGCATGCA +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESYTGSS*KNPQHA
Trigger: TGCATGCTGTGGATTCTTGCATGAGCTTCCAGTGTA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTTTTCCCTGTTGGTCTaGCTTACAGATGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAFSLLV*LTDVAS
Trigger: AGAGGCCACATCTGTAAGGCAGACCAACAGGGAAAA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTCATGGGCACCAGAGATaGTCGCAGAGGAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIHGHQR*SQRSKF
Trigger: GAACTTGCTCCTCTGCGAGCATCTCTGGTGCCCATG...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCAAAGAAACGGGTTATaGAGTGTTCCATGGGCACCA +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAQRNGL*SVPWAP
Trigger: TGGTGCCCATGGAACACTGCATAACCCGTTTCTTTG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTTTGTTGCAGATTCCTaGATTTCCCTAGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAFVADS*ISLAGW
Trigger: CCAGCCTGCTAGGGAAATCCAGGAATCTGCAACAAA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCTTCAGCCCTTAAACTaGGGATTGCAGTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHALQPLN*GLQCCQ
Trigger: CTGACAACACTGCAATCCCCAGTTTAAGGGCTGAAG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTTCAATCCCAGCTCTTaGCTAGAACTCTTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAFNPSS*LELLPC
Trigger: ACAGGGCAAGAGTTCTAGCCAAGAGCTGGGATTGAA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTGCTTTCTTGGCCTCTTaGTGCTCTCCAGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIAFLAS*CSPGSV
Trigger: CACTGAGCCTGGAGAGCACCAAGAGGCCAAGAAAGC...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACAGAAGATCAATGGGATaGTCCCCAGCCAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANRRSMG*SPAKSL
Trigger: GAGGCTTTTGGCTGGGGACCATCCCATTGATCTTCT...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTGTGCTTATCCTTGTTaGGGTCACACTCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESCAYPC*GHTPQR
Trigger: TCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCAAGTCTACTGGAGTTaGAATTCTGCTGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAQVYWS*NSAALS
Trigger: TGACAGAGCAGCAGAATTTCAACTCCAGTAGACTTG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR TCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTGTTCTTGGTTACCCTaGTCAAATTCATCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHACSWLP*SNSSSC
Trigger: GCAGGAGGATGAATTTGATCAGGGTAACCAAGAACA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTCCTGGCAGACACAGTaGGGTTTTCCCTGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANISWQTQ*GFPCWS
Trigger: AGACCAACAGGGAAAACCTCACTGTGTCTGCCAGGA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTAAGTTGAATCCCCTCTaGACACAGACAGGGAATAAA +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESKLNPL*TQTGNK
Trigger: TTTATTCCCTGTCTGTGTGCAGAGGGGATTCAACTT...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR GCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTGGACCCAGAGCCACTaGAGAAAAATTGAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESWTQSH*RKIEVE
Trigger: TTCAACTTCAATTTTTCTGCAGTGGCTCTGGGTCCA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR GCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTTCTTGGCCTCTTGGTaGTCTCCAGGCTCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIFLASW*SPGSVV
Trigger: TACCACTGAGCCTGGAGAGCACCAAGAGGCCAAGAA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCATGCACCCTCATGTTaGCTTCACTTGACGTTTCCT +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANHAPSC*LHLTFP
Trigger: AGGAAACGTCAAGTGAAGGCAACATGAGGGTGCATG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAGGTCTGATTGTCAGTaGCACAAACTTGATCAAGGG +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHARSDCQ*HKLDQG
Trigger: CCCTTGATCAAGTTTGTGGCACTGACAATCAGACCT...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTCACTAAACTGCCAGTaGACAGGATACACATACATG +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESSLNCQ*TGYTYM
Trigger: CATGTATGTGTATCCTGTGCACTGGCAGTTTAGTGA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCAAAGAAACGGGTTATaGAGTGTTCCATGGGCACCA +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANQRNGL*SVPWAP
Trigger: TGGTGCCCATGGAACACTGCATAACCCGTTTCTTTG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTCCTTCAGGGTGATGTaGTTATCCTTGTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANSFRVM*LSLLGS
Trigger: TGACCCCAACAAGGATAAGCACATCACCCTGAAGGA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTTCAATCCCAGCTCTTaGCTAGAACTCTTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANFNPSS*LELLPC
Trigger: ACAGGGCAAGAGTTCTAGCCAAGAGCTGGGATTGAA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTCTTGGTTATCATTGTaGGTACCAACTTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHASWLSL*VPTSPG
Trigger: GCCAGGTGAAGTTGGTACCCACAATGATAACCAAGA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTCTTCTGTCTCTTTGTaGTTGCTGATAGCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESSSVSL*LLIASR
Trigger: CCTAGAAGCTATCAGCAACCACAAAGAGACAGAAGA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCAACTCCATGATTTCTaGGCGTGGTATTACCATCAT +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESQLHDF*AWYYHH
Trigger: ATGATGGTAATACCACGCCCAGAAATCATGGAGTTG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCAGAAAGGCCTGGCTTaGGATGAAGTAGTCATCACT +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANQKGLA*DEVVIT
Trigger: AGTGATGACTACTTCATCCCAAGCCAGGCCTTTCTG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTCTGCCTTACAGATGTaGCCTCTTTTACACTGGAAG +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHASALQM*PLLHWK
Trigger: CTTCCAGTGTAAAAGAGGCCACATCTGTAAGGCAGA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCAGAGCCTCATAACTTaGCCAGAATATAAGCACTTG +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESQSLIT*PEYKHL
Trigger: CAAGTGCTTATATTCTGGCCAAGTTATGAGGCTCTG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418378.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCTAATTCTGGTGGCGTaGATGGGGTTAACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANLILVA*MGLTVF
Trigger: GAAGACTGTTAACCCCATCCACGCCACCAGAATTAG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418378.5
CDS-3UTR TCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTGCCATTCAGTTTCTTaGATGTGCTTATTGACGTTC +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESCHSVS*MCLLTF
Trigger: GAACGTCAATAAGCACATTCAAGAAACTGAATGGCA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTCATCATCAACTCCATaGTTTCTGGGCGTGGTATTA +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHASSSTP*FLGVVL
Trigger: TAATACCACGCCCAGAAATCATGGAGTTGATGATGA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTTTGCTCCTCAATTTTaGGGTGATAGGCAATGGATT +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESFAPQF*GDRQWI
Trigger: AATCCATTGCCTATCACCTCAAAATTGAGGAGCAAA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTCAGTGCCACAAACTTaGTCAAGGGGTTTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANSVPQT*SRGFVG
Trigger: TCCAACAAAACCCCTTGATCAAGTTTGTGGCACTGA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTGTCATCGTTTTTGTTaGAGATTCCTGGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESCHRFC*RFLDFP
Trigger: AGGGAAATCCAGGAATCTGCAACAAAAACGATGACA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR GCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTGCAGTGTTGTCAGGTaGTACCGTTTCAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANICSVVR*YRFSSW
Trigger: CCAACTGCTGAAACGGTAGCACCTGACAACACTGCA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCTTGGCTATGTTTACTaGTCCTGTTCAACTGATGAT +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESLGYVY*SCSTDD
Trigger: ATCATCAGTTGAACAGGAGCAGTAAACATAGCCAAG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTGCTTGCTGTTAGCATaGTCCCTGGGCAATTCTGTC +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANICLLLA*SLGNSV
Trigger: GACAGAATTGCCCAGGGAGCATGCTAACAGCAAGCA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCATCCTCCTGCATCTTaGTTACTTGAGTTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAHPPAS*LLELVD
Trigger: ATCAACCAACTCAAGTAAGCAAGATGCAGGAGGATG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTACACTGGAAGCTCATaGAAGAATCCACAGCATGCA +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANYTGSS*KNPQHA
Trigger: TGCATGCTGTGGATTCTTGCATGAGCTTCCAGTGTA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTCAAGTTCACTAAACTaGCAGTGCACAGGATACACA +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHASSSLN*QCTGYT
Trigger: TGTGTATCCTGTGCACTGGCAGTTTAGTGAACTTGA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTTTACAGGCAGTGCTTaGAAACCAAAAGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAFTGSA*KPKGKE
Trigger: CTCTTTCCCTTTTGGTTTGCAAGCACTGCCTGTAAA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418378.5
CDS-3UTR CCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTGGGAATCGTCTTCTGTaGATACTGCTGTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESGNRLL*ILLFLF
Trigger: AAAAAGAAACAGCAGTATCCACAGAAGACGATTCCC...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTTTTCAGCCTTATGGTaGGAATCGTCTTCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAFSALW*ESSSVD
Trigger: ATCCACAGAAGACGATTCCCACCATAAGGCTGAAAA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCAACTCCATGATTTCTaGGCGTGGTATTACCATCAT +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAQLHDF*AWYYHH
Trigger: ATGATGGTAATACCACGCCCAGAAATCATGGAGTTG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTGCTCTCCAGGCTCAGTaGTACCTATATTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESALQAQ*YLYFHF
Trigger: AAAATGAAAATATAGGTACCACTGAGCCTGGAGAGC...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTGGCCTCTTTTACACTaGAAGCTCATGCAAGAATCC +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANWPLLH*KLMQES
Trigger: GGATTCTTGCATGAGCTTCCAGTGTAAAAGAGGCCA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATCAAGGGGTTTTGTTaGAGGACAAGTCACTGGATC +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANIKGFC*RTSHWI
Trigger: GATCCAGTGACTTGTCCTCCAACAAAACCCCTTGAT...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCTATCCATAGGGTGTTaGTCAAGTTCACTAAACTGC +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHALSIGC*SSSLNC
Trigger: GCAGTTTAGTGAACTTGACCAACACCCTATGGATAG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTTATGCAGTGTTCCATaGGCACCAGAGATGCTCGCA +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANILCSVP*APEMLA
Trigger: TGCGAGCATCTCTGGTGCCCATGGAACACTGCATAA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTGTGCTTATCCTTGTTaGGGTCACACTCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANCAYPC*GHTPQR
Trigger: TCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTCAACTAGTGGGGGTCTaGAGTGACAGACGAGAATTT +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIQLVGV*SDRREF
Trigger: AAATTCTCGTCTGTCACTTCAGACCCCCACTAGTTG...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR TCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCTTGAATGTGCTTATTaGCGTTCGATGCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHALECAY*RSMHFP
Trigger: AGGAAAATGCATCGAACGTCAATAAGCACATTCAAG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTGCCATTCAGTTTCTTaGATGTGCTTATTGACGTTC +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHACHSVS*MCLLTF
Trigger: GAACGTCAATAAGCACATTCAAGAAACTGAATGGCA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTCATCATCAACTCCATaGTTTCTGGGCGTGGTATTA +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANSSSTP*FLGVVL
Trigger: TAATACCACGCCCAGAAATCATGGAGTTGATGATGA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTTTGCTCCTCAATTTTaGGGTGATAGGCAATGGATT +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAFAPQF*GDRQWI
Trigger: AATCCATTGCCTATCACCTCAAAATTGAGGAGCAAA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATCCGTAGAGGAAACTaGATCACTTCAAAGTCCGTA +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANIRRGN*ITSKSV
Trigger: TACGGACTTTGAAGTGATTCAGTTTCCTCTACGGAT...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTGGACCCAGAGCCACTaGAGAAAAATTGAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANWTQSH*RKIEVE
Trigger: TTCAACTTCAATTTTTCTGCAGTGGCTCTGGGTCCA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR GCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTGTACCTTCAGTTGGTaGATACTCCAAATTCACACT +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHACTFSW*ILQIHT
Trigger: AGTGTGAATTTGGAGTATGCACCAACTGAAGGTACA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCATCCTCCTGCATCTTaGTTACTTGAGTTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANHPPAS*LLELVD
Trigger: ATCAACCAACTCAAGTAAGCAAGATGCAGGAGGATG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTTCCTCTTCCATTTCTaGATTGGAGTTATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESFLFHF*IGVIFL
Trigger: CAAGAAGATAACTCCAATGCAGAAATGGAAGAGGAA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCTTATTGACGTTCGATaGATTTTCCTCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESLIDVR*IFLFHF
Trigger: GAAATGGAAGAGGAAAATGCATCGAACGTCAATAAG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTCATGCACCCTCATGTTaGCTTCACTTGACGTTTCCT +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIHAPSC*LHLTFP
Trigger: AGGAAACGTCAAGTGAAGGCAACATGAGGGTGCATG...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTCACTAAACTGCCAGTaGACAGGATACACATACATG +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANSLNCQ*TGYTYM
Trigger: CATGTATGTGTATCCTGTGCACTGGCAGTTTAGTGA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTCAAGTTCACTAAACTaGCAGTGCACAGGATACACA +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANSSSLN*QCTGYT
Trigger: TGTGTATCCTGTGCACTGGCAGTTTAGTGAACTTGA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTCAAAGAAACGGGTTATaGAGTGTTCCATGGGCACCA +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIQRNGL*SVPWAP
Trigger: TGGTGCCCATGGAACACTGCATAACCCGTTTCTTTG...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTGGGAATCGTCTTCTGTaGATACTGCTGTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAGNRLL*ILLFLF
Trigger: AAAAAGAAACAGCAGTATCCACAGAAGACGATTCCC...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTTTTCAGCCTTATGGTaGGAATCGTCTTCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANFSALW*ESSSVD
Trigger: ATCCACAGAAGACGATTCCCACCATAAGGCTGAAAA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACGATTTTTCAGCCTTATaGTGGGAATCGTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANDFSAL*WESSSV
Trigger: CACAGAAGACGATTCCCACCATAAGGCTGAAAAATC...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTCTGCTGACTGTTCATaGCTTTCCTCTTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHASADCS*LSSFDF
Trigger: AAAGTCAAAAGAGGAAAGCCATGAACAGTCAGCAGA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTCAGAAAGGCCTGGCTTaGGATGAAGTAGTCATCACT +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIQKGLA*DEVVIT
Trigger: AGTGATGACTACTTCATCCCAAGCCAGGCCTTTCTG...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCTATCCATAGGGTGTTaGTCAAGTTCACTAAACTGC +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANLSIGC*SSSLNC
Trigger: GCAGTTTAGTGAACTTGACCAACACCCTATGGATAG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTATCTTGCATTTGTCTTaGCCTCCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIILHLS*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCAAGACAAATGCAAGAT...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503414.5
CDS-3UTR TCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTCAAGTCTACTGGAGTTaGAATTCTGCTGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIQVYWS*NSAALS
Trigger: TGACAGAGCAGCAGAATTTCAACTCCAGTAGACTTG...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR TCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCAGGGAATAAAAGTTTaGCAAACACCCAAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAQGIKV*QTPKKN
Trigger: GTTTTTCTTGGGTGTTTGTCAAACTTTTATTCCCTG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR TCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTGTTCTTGGTTACCCTaGTCAAATTCATCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANICSWLP*SNSSSC
Trigger: GCAGGAGGATGAATTTGATCAGGGTAACCAAGAACA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCTTGAATGTGCTTATTaGCGTTCGATGCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANLECAY*RSMHFP
Trigger: AGGAAAATGCATCGAACGTCAATAAGCACATTCAAG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTGCCATTCAGTTTCTTaGATGTGCTTATTGACGTTC +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANCHSVS*MCLLTF
Trigger: GAACGTCAATAAGCACATTCAAGAAACTGAATGGCA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTCAGTGCCACAAACTTaGTCAAGGGGTTTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANISVPQT*SRGFVG
Trigger: TCCAACAAAACCCCTTGATCAAGTTTGTGGCACTGA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTTCCTCTTCCATTTCTaGATTGGAGTTATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAFLFHF*IGVIFL
Trigger: CAAGAAGATAACTCCAATGCAGAAATGGAAGAGGAA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTACACTGGAAGCTCATaGAAGAATCCACAGCATGCA +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIYTGSS*KNPQHA
Trigger: TGCATGCTGTGGATTCTTGCATGAGCTTCCAGTGTA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTAGGTCTGATTGTCAGTaGCACAAACTTGATCAAGGG +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIRSDCQ*HKLDQG
Trigger: CCCTTGATCAAGTTTGTGGCACTGACAATCAGACCT...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACAAAGCCCAGTCTTCATaGTTTCCAGATTTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANKAQSS*FPDLAK
Trigger: TTTTGCCAAATCTGGAAAGCATGAAGACTGGGCTTT...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418378.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTCTGCTGACTGTTCATaGCTTTCCTCTTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANSADCS*LSSFDF
Trigger: AAAGTCAAAAGAGGAAAGCCATGAACAGTCAGCAGA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTGTGATACTTTCTTGTTaGTTAGAATCTGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESVILSC*LESVKE
Trigger: TTCCTTCACAGATTCTAACCAACAAGAAAGTATCAC...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTTTCTAGGTTGTTCTTaGTTTTCCTCTCTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAFLGCS*FSSLFV
Trigger: CACAAAGAGAGAGGAAAACCAAGAACAACCTAGAAA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTCTTGGTTATCATTGTaGGTACCAACTTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANISWLSL*VPTSPG
Trigger: GCCAGGTGAAGTTGGTACCCACAATGATAACCAAGA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTCTGTCTTTCTTTCTTaGTTATCATTGTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHASVFLS*LSLWVP
Trigger: TGGTACCCACAATGATAACCAAGAAAGAAAGACAGA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACGCTCTCCAGGCTCAGTaGTACCTATATTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANALQAQ*YLYFHF
Trigger: AAAATGAAAATATAGGTACCACTGAGCCTGGAGAGC...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTGGCCTCTTTTACACTaGAAGCTCATGCAAGAATCC +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIWPLLH*KLMQES
Trigger: GGATTCTTGCATGAGCTTCCAGTGTAAAAGAGGCCA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTCTGCCTTACAGATGTaGCCTCTTTTACACTGGAAG +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANISALQM*PLLHWK
Trigger: CTTCCAGTGTAAAAGAGGCCACATCTGTAAGGCAGA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTATCAAGGGGTTTTGTTaGAGGACAAGTCACTGGATC +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIIKGFC*RTSHWI
Trigger: GATCCAGTGACTTGTCCTCCAACAAAACCCCTTGAT...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTGTGCTTATCCTTGTTaGGGTCACACTCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANICAYPC*GHTPQR
Trigger: TCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTATCCGTAGAGGAAACTaGATCACTTCAAAGTCCGTA +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIIRRGN*ITSKSV
Trigger: TACGGACTTTGAAGTGATTCAGTTTCCTCTACGGAT...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR TCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTGCACTTCTTTGTGTTaGAGGAAAAGGCTTATCTTA +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANCTSLC*RKRLIL
Trigger: TAAGATAAGCCTTTTCCTTCAACACAAAGAAGTGCA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418378.5
CDS-3UTR GCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCTTATTGACGTTCGATaGATTTTCCTCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANLIDVR*IFLFHF
Trigger: GAAATGGAAGAGGAAAATGCATCGAACGTCAATAAG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTCAAGTTCACTAAACTaGCAGTGCACAGGATACACA +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANISSSLN*QCTGYT
Trigger: TGTGTATCCTGTGCACTGGCAGTTTAGTGAACTTGA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATGTTAAATACCTGGTaGATAGGTTGTTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANMLNTW*IGCCQA
Trigger: TGCTTGACAACAACCTATGCACCAGGTATTTAACAT...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTATATTAGGTTTGGTTTaGTCCTTTGCTTCTTATCTC +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAILGLV*SFASYL
Trigger: GAGATAAGAAGCAAAGGAGCAAACCAAACCTAATAT...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTGATTTTTCAGCCTTATaGTGGGAATCGTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIDFSAL*WESSSV
Trigger: CACAGAAGACGATTCCCACCATAAGGCTGAAAAATC...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTGTGATACTTTCTTGTTaGTTAGAATCTGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAVILSC*LESVKE
Trigger: TTCCTTCACAGATTCTAACCAACAAGAAAGTATCAC...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTTTCTAGGTTGTTCTTaGTTTTCCTCTCTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANFLGCS*FSSLFV
Trigger: CACAAAGAGAGAGGAAAACCAAGAACAACCTAGAAA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTCTGTCTTTCTTTCTTaGTTATCATTGTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANSVFLS*LSLWVP
Trigger: TGGTACCCACAATGATAACCAAGAAAGAAAGACAGA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACAAAATATCATCAGATTaGGTATTGTCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANKISSD*VLSSSC
Trigger: GCAGGAGGAAGACAATACCCAATCTGATGATATTTT...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTCTTCTGTCTCTTTGTaGTTGCTGATAGCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANISSVSL*LLIASR
Trigger: CCTAGAAGCTATCAGCAACCACAAAGAGACAGAAGA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTTAAGAGAAGATCAATaGGATGGTCCCCAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANILREDQ*DGPQPK
Trigger: TTTTGGCTGGGGACCATCCCATTGATCTTCTCTTAA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTCTATCCATAGGGTGTTaGTCAAGTTCACTAAACTGC +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANILSIGC*SSSLNC
Trigger: GCAGTTTAGTGAACTTGACCAACACCCTATGGATAG...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCATATATTTCTGAAGTaGTTAGAACAGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANHIFLK*LEQRRM
Trigger: CATCCTCCTCTGTTCTAACCACTTCAGAAATATATG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCATGCTTTCCAGATTTaGCAAAATGCACTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANHAFQI*QNALLC
Trigger: ACAAAGAAGTGCATTTTGCCAAATCTGGAAAGCATG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418378.5
CDS-3UTR GCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTGTCATCGTTTTTGTTaGAGATTCCTGGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANICHRFC*RFLDFP
Trigger: AGGGAAATCCAGGAATCTGCAACAAAAACGATGACA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR GCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTGTACCTTCAGTTGGTaGATACTCCAAATTCACACT +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANICTFSW*ILQIHT
Trigger: AGTGTGAATTTGGAGTATGCACCAACTGAAGGTACA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTGCTCTCCAGGCTCAGTaGTACCTATATTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIALQAQ*YLYFHF
Trigger: AAAATGAAAATATAGGTACCACTGAGCCTGGAGAGC...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTCTTATTGACGTTCGATaGATTTTCCTCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANILIDVR*IFLFHF
Trigger: GAAATGGAAGAGGAAAATGCATCGAACGTCAATAAG...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR GCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTATGTTAAATACCTGGTaGATAGGTTGTTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIMLNTW*IGCCQA
Trigger: TGCTTGACAACAACCTATGCACCAGGTATTTAACAT...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTTTCTAGGTTGTTCTTaGTTTTCCTCTCTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIFLGCS*FSSLFV
Trigger: CACAAAGAGAGAGGAAAACCAAGAACAACCTAGAAA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTCTGTCTTTCTTTCTTaGTTATCATTGTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANISVFLS*LSLWVP
Trigger: TGGTACCCACAATGATAACCAAGAAAGAAAGACAGA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTAAAATATCATCAGATTaGGTATTGTCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIKISSD*VLSSSC
Trigger: GCAGGAGGAAGACAATACCCAATCTGATGATATTTT...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
3UTR CAA 72 bp GTTTCCAAAGTTAATGTTAAATACCTGGTGCATAGGTaGTTGTCAAGCAATTACTCTCATTGTCTTGTCATA +
Preference number: 4 (lower is better)
Translates to: VSKVNVKYLVHR*LSSNYSHCLVI
Trigger: TATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAGGTATTTAACATTAACTTTGGAAAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CCA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTGTGATACTTTCTTGTTaGTTAGAATCTGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIVILSC*LESVKE
Trigger: TTCCTTCACAGATTCTAACCAACAAGAAAGTATCAC...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS GCA 90 bp CTCGGCCTCCAGAAAGGCCTGGCTTGGGATGAAGTAGTCATCACTTaGACTGTGCCTGGGGCCATCAGTGCCGCCATCATCGCCATCATC +
Preference number: 5 (lower is better)
Translates to: LGLQKGLAWDEVVIT*TVPGAISAAIIAII
Trigger: GATGATGGCGATGATGGCGGCACTGATGGCCCCAGGCACAGTGCAAGTGATGACTACTTCATCCCAAGCCAGGCCTTTCTGGAGGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS TCA 90 bp CAATGGATTGAGCTCTCTCGGCCTCCAGAAAGGCCTGGCTTGGGATaGAGTAGTCATCACTTGCACTGTGCCTGGGGCCATCAGTGCCGC +
Preference number: 5 (lower is better)
Translates to: QWIELSRPPERPGLG*SSHHLHCAWGHQCR
Trigger: GCGGCACTGATGGCCCCAGGCACAGTGCAAGTGATGACTACTTCATCCCAAGCCAGGCCTTTCTGGAGGCCGAGAGAGCTCAATCCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS GCA 90 bp ATTTCCCTAGCAGGCTGGCCTCTCATGCGAGGGCTTTACAGGCAGTaGTTGCAAACCAAAAGGGAAAGAGCTAATTCTGGTGGCGTGGAT +
Preference number: 5 (lower is better)
Translates to: ISLAGWPLMRGLYRQ*LQTKRERANSGGVD
Trigger: ATCCACGCCACCAGAATTAGCTCTTTCCCTTTTGGTTTGCAAGCACTGCCTGTAAAGCCCTCGCATGAGAGGCCAGCCTGCTAGGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418378.5
ENST00000434434.5
CDS GCA 90 bp TGTGCTTATCCTTGTTGGGGTCACACTCCTCAAAGAAACGGGTTATaGAGTGTTCCATGGGCACCAGAGATGCTCGCAGAGGAGCAAGTT +
Preference number: 5 (lower is better)
Translates to: CAYPCWGHTPQRNGL*SVPWAPEMLAEEQV
Trigger: AACTTGCTCCTCTGCGAGCATCTCTGGTGCCCATGGAACACTGCATAACCCGTTTCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CCA 90 bp TGTTGGGGTCACACTCCTCAAAGAAACGGGTTATGCAGTGTTCCATaGGCACCAGAGATGCTCGCAGAGGAGCAAGTTCAGAATGTGTCA +
Preference number: 5 (lower is better)
Translates to: CWGHTPQRNGLCSVP*APEMLAEEQVQNVS
Trigger: TGACACATTCTGAACTTGCTCCTCTGCGAGCATCTCTGGTGCCCATGGAACACTGCATAACCCGTTTCTTTGAGGAGTGTGACCCCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS TCA 90 bp GTGCCGCCATCATCGCCATCATCATCGCCATCATCATCAACTCCATaGTTTCTGGGCGTGGTATTACCATCATCAGTAGGTTCCATGAGC +
Preference number: 5 (lower is better)
Translates to: VPPSSPSSSPSSSTP*FLGVVLPSSVGSMS
Trigger: GCTCATGGAACCTACTGATGATGGTAATACCACGCCCAGAAATCATGGAGTTGATGATGATGGCGATGATGATGGCGATGATGGCGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS GCA 90 bp AGTCACTGGATCCTGGCAGACACAGTGAGGTTTTCCCTGTTGGTCTaGCTTACAGATGTGGCCTCTTTTACACTGGAAGCTCATGCAAGA +
Preference number: 5 (lower is better)
Translates to: SHWILADTVRFSLLV*LTDVASFTLEAHAR
Trigger: TCTTGCATGAGCTTCCAGTGTAAAAGAGGCCACATCTGTAAGGCAGACCAACAGGGAAAACCTCACTGTGTCTGCCAGGATCCAGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CCA 90 bp ACTGTCATCGTTTTTGTTGCAGATTCCTGGATTTCCCTAGCAGGCTaGCCTCTCATGCGAGGGCTTTACAGGCAGTGCTTGCAAACCAAA +
Preference number: 5 (lower is better)
Translates to: TVIVFVADSWISLAG*PLMRGLYRQCLQTK
Trigger: TTTGGTTTGCAAGCACTGCCTGTAAAGCCCTCGCATGAGAGGCCAGCCTGCTAGGGAAATCCAGGAATCTGCAACAAAAACGATGACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418378.5
ENST00000434434.5
ENST00000541496.1
CDS GCA 90 bp TCTTCTTTAATTCCAAAGCAGTGGCCCCACTCCTTCAGGGTGATGTaGTTATCCTTGTTGGGGTCACACTCCTCAAAGAAACGGGTTATG +
Preference number: 5 (lower is better)
Translates to: SSLIPKQWPHSFRVM*LSLLGSHSSKKRVM
Trigger: CATAACCCGTTTCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACATCACCCTGAAGGAGTGGGGCCACTGCTTTGGAATTAAAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTGTGACAGACGAGAATTaGGAGGTTGGCACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESVTDEN*EVGTRE
Trigger: CTCTCTGGTGCCAACCTCCAAATTCTCGTCTGTCAC...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTGTGATAGGCAATGGATaGAGCTCTCTCGGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAVIGNG*SSLGLQ
Trigger: CTGGAGGCCGAGAGAGCTCAATCCATTGCCTATCAC...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTGCTTTCTTGGCCTCTaGGTGCTCTCCAGGCTCAGT +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHACFLGL*VLSRLS
Trigger: ACTGAGCCTGGAGAGCACCAAGAGGCCAAGAAAGCA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CCA 90 bp TGGGGATTGCAGTGTTGTCAGGTGCTACCGTTTCAGCAGTTGGTTTaGAATGATCAGATAATAATCTTGCATTTGTCGGGATTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: WGLQCCQVLPFQQLV*NDQIIILHLSGLQL
Trigger: CAGCTGCAATCCCGACAAATGCAAGATTATTATCTGATCATTCCAAACCAACTGCTGAAACGGTAGCACCTGACAACACTGCAATCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000434434.5
ENST00000458304.2
ENST00000509407.5
ENST00000512317.5
ENST00000535835.5
ENST00000543631.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCCCTTAAACTGGGGATaGCAGTGTTGTCAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESPLNWG*QCCQVL
Trigger: TAGCACCTGACAACACTGCAATCCCCAGTTTAAGGG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCTTCAATCCCAGCTCTaGGCTAGAACTCTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHALQSQL*ARTLAL
Trigger: CAGGGCAAGAGTTCTAGCCAAGAGCTGGGATTGAAG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACGTGATAGGCAATGGATaGAGCTCTCTCGGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANVIGNG*SSLGLQ
Trigger: CTGGAGGCCGAGAGAGCTCAATCCATTGCCTATCAC...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTGCTTTCTTGGCCTCTaGGTGCTCTCCAGGCTCAGT +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANCFLGL*VLSRLS
Trigger: ACTGAGCCTGGAGAGCACCAAGAGGCCAAGAAAGCA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTGAGTTCTCTGCTTTCTaGGCCTCTTGGTGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAEFSAF*ASWCSP
Trigger: TGGAGAGCACCAAGAGGCCAAGAAAGCAGAGAACTC...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTGCATGCACCCTCATGTaGCCTTCACTTGACGTTTCC +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAACTLM*PSLDVS
Trigger: GGAAACGTCAAGTGAAGGCAACATGAGGGTGCATGC...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTGTGAGGTTTTCCCTGTaGGTCTGCCTTACAGATGTG +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESVRFSL*VCLTDV
Trigger: CACATCTGTAAGGCAGACCAACAGGGAAAACCTCAC...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCCCTTAAACTGGGGATaGCAGTGTTGTCAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAPLNWG*QCCQVL
Trigger: TAGCACCTGACAACACTGCAATCCCCAGTTTAAGGG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTCTTGGCTAGAACTCTaGCCCTGTTCTGCTGACTGT +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHASWLEL*PCSADC
Trigger: ACAGTCAGCAGAACAGGGCAAGAGTTCTAGCCAAGA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTACCATCACTGTCCTCTaGATCCTTCAATCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHATITVL*ILQSQL
Trigger: GAGCTGGGATTGAAGGATCAAGAGGACAGTGATGGT...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACGAGTTCTCTGCTTTCTaGGCCTCTTGGTGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANEFSAF*ASWCSP
Trigger: TGGAGAGCACCAAGAGGCCAAGAAAGCAGAGAACTC...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACGCATGCACCCTCATGTaGCCTTCACTTGACGTTTCC +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANACTLM*PSLDVS
Trigger: GGAAACGTCAAGTGAAGGCAACATGAGGGTGCATGC...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCTTGATCAAGGGGTTTaGTTGGAGGACAAGTCACTG +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESLDQGV*LEDKSL
Trigger: CAGTGACTTGTCCTCCAACAAAACCCCTTGATCAAG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTGTCAGTGCCACAAACTaGATCAAGGGGTTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESVSATN*IKGFCW
Trigger: CCAACAAAACCCCTTGATCAAGTTTGTGGCACTGAC...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTGCATGAGGATATTCTaGAGCCAGTCTCTCATCCGT +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESCMRIF*SQSLIR
Trigger: ACGGATGAGAGACTGGCTCAAGAATATCCTCATGCA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTATGTGCTTATCCTTGTaGGGGTCACACTCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESMCLSL*GSHSSK
Trigger: CTTTGAGGAGTGTGACCCCAACAAGGATAAGCACAT...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS GCA 90 bp TCAGACTCTTCCAAAATATCATCAGATTGGGTATTGTCTTCCTCCTaGTTGCTGTTAGCATGCTCCCTGGGCAATTCTGTCTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: SDSSKISSDWVLSSS*LLLACSLGNSVFLS
Trigger: AGAAAGAAAGACAGAATTGCCCAGGGAGCATGCTAACAGCAAGCAGGAGGAAGACAATACCCAATCTGATGATATTTTGGAAGAGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCTGTCATCGTTTTTGTaGCAGATTCCTGGATTTCCC +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESLSSFL*QIPGFP
Trigger: GGGAAATCCAGGAATCTGCAACAAAAACGATGACAG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTGTTAGCTCTGCTTCTTaGCCCAGAGGCATATTCAAG +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAVSSAS*PRGIFK
Trigger: CTTGAATATGCCTCTGGGCAAAGAAGCAGAGCTAAC...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTTGCATTTGTCGGGATaGCAGCTGCAGTTCCCAAGA +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANLHLSG*QLQFPR
Trigger: TCTTGGGAACTGCAGCTGCAATCCCGACAAATGCAA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTCATCAGATTGGGTATaGTCTTCCTCCTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHASSDWV*SSSCLL
Trigger: CAGCAAGCAGGAGGAAGACAATACCCAATCTGATGA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTGCTTTCTTGGCCTCTaGGTGCTCTCCAGGCTCAGT +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANICFLGL*VLSRLS
Trigger: ACTGAGCCTGGAGAGCACCAAGAGGCCAAGAAAGCA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTCATGTTGCCTTCACTaGACGTTTCCTCCTCATTTG +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESSCCLH*TFPPHL
Trigger: CAAATGAGGAGGAAACGTCAAGTGAAGGCAACATGA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACGTGAGGTTTTCCCTGTaGGTCTGCCTTACAGATGTG +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANVRFSL*VCLTDV
Trigger: CACATCTGTAAGGCAGACCAACAGGGAAAACCTCAC...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTGATCAAGGGGTTTTGTaGGAGGACAAGTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHADQGVL*EDKSLD
Trigger: ATCCAGTGACTTGTCCTCCAACAAAACCCCTTGATC...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTGTCAGTGCCACAAACTaGATCAAGGGGTTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAVSATN*IKGFCW
Trigger: CCAACAAAACCCCTTGATCAAGTTTGTGGCACTGAC...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTGCATGAGGATATTCTaGAGCCAGTCTCTCATCCGT +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHACMRIF*SQSLIR
Trigger: ACGGATGAGAGACTGGCTCAAGAATATCCTCATGCA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACGTGATGTGCTTATCCTaGTTGGGGTCACACTCCTCA +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANVMCLS*LGSHSS
Trigger: TGAGGAGTGTGACCCCAACAAGGATAAGCACATCAC...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCTTCCCCTCAAGCTCTaGTTCTCAGAGCCTCATAAC +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANLPLKL*FSEPHN
Trigger: GTTATGAGGCTCTGAGAACAAGAGCTTGAGGGGAAG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418378.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCTTTACAGGCAGTGCTaGCAAACCAAAAGGGAAAGA +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESLYRQC*QTKRER
Trigger: TCTTTCCCTTTTGGTTTGCAAGCACTGCCTGTAAAG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418378.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCTGTCATCGTTTTTGTaGCAGATTCCTGGATTTCCC +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHALSSFL*QIPGFP
Trigger: GGGAAATCCAGGAATCTGCAACAAAAACGATGACAG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTACGAGAATTTGGAGGTaGGCACCAGAGAGTATTTCA +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHATRIWR*APESIS
Trigger: TGAAATACTCTCTGGTGCCAACCTCCAAATTCTCGT...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACGTTAGCTCTGCTTCTTaGCCCAGAGGCATATTCAAG +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANVSSAS*PRGIFK
Trigger: CTTGAATATGCCTCTGGGCAAAGAAGCAGAGCTAAC...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTGCAGAAAAATTGAAGTaGAATCCCCTCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAAEKLK*NPLCTQ
Trigger: CTGTGTGCAGAGGGGATTCAACTTCAATTTTTCTGC...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCTACCGTTTCAGCAGTaGGTTTGGAATGATCAGATA +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESLPFQQ*VWNDQI
Trigger: TATCTGATCATTCCAAACCAACTGCTGAAACGGTAG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTCTTCAATCCCAGCTCTaGGCTAGAACTCTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANILQSQL*ARTLAL
Trigger: CAGGGCAAGAGTTCTAGCCAAGAGCTGGGATTGAAG...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCCAATGTACCTTCAGTaGGTGCATACTCCAAATTCA +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESPMYLQ*VHTPNS
Trigger: TGAATTTGGAGTATGCACCAACTGAAGGTACATTGG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCTCCATTGGAAATATTaGGATCCTGCTCTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESLHWKY*DPALGF
Trigger: GAAACCAAGAGCAGGATCCAAATATTTCCAATGGAG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTCTTGCTTACTTGAGTaGGTTGATCAGACTCTTCCA +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESSCLLE*VDQTLP
Trigger: TGGAAGAGTCTGATCAACCAACTCAAGTAAGCAAGA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCTGCATCTTGCTTACTaGAGTTGGTTGATCAGACTC +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHALHLAY*SWLIRL
Trigger: GAGTCTGATCAACCAACTCAAGTAAGCAAGATGCAG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACGCCAGTTTTACCCTCTaGACTCTGCCATTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANASFTL*TLPFSF
Trigger: GAAACTGAATGGCAGAGTCAAGAGGGTAAAACTGGC...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTCATGTTGCCTTCACTaGACGTTTCCTCCTCATTTG +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHASCCLH*TFPPHL
Trigger: CAAATGAGGAGGAAACGTCAAGTGAAGGCAACATGA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTGCATGCACCCTCATGTaGCCTTCACTTGACGTTTCC +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIACTLM*PSLDVS
Trigger: GGAAACGTCAAGTGAAGGCAACATGAGGGTGCATGC...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACGATCAAGGGGTTTTGTaGGAGGACAAGTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANDQGVL*EDKSLD
Trigger: ATCCAGTGACTTGTCCTCCAACAAAACCCCTTGATC...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCTTGATCAAGGGGTTTaGTTGGAGGACAAGTCACTG +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANLDQGV*LEDKSL
Trigger: CAGTGACTTGTCCTCCAACAAAACCCCTTGATCAAG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTGCATGAGGATATTCTaGAGCCAGTCTCTCATCCGT +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANCMRIF*SQSLIR
Trigger: ACGGATGAGAGACTGGCTCAAGAATATCCTCATGCA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATGTGCTTATCCTTGTaGGGGTCACACTCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANMCLSL*GSHSSK
Trigger: CTTTGAGGAGTGTGACCCCAACAAGGATAAGCACAT...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCTGGTGCATAGGTTGTaGTCAAGCAATTACTCTCAT +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESLVHRL*SSNYSH
Trigger: ATGAGAGTAATTGCTTGACAACAACCTATGCACCAG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTCCTTTTCACCGGGATaGCAGCTGCAGTTCCCAAGA +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANISFSPG*QLQFPR
Trigger: TCTTGGGAACTGCAGCTGCAATCCCGGTGAAAAGGA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACACGAGAATTTGGAGGTaGGCACCAGAGAGTATTTCA +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANTRIWR*APESIS
Trigger: TGAAATACTCTCTGGTGCCAACCTCCAAATTCTCGT...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTTGCATTTGTCGGGATaGCAGCTGCAGTTCCCAAGA +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANILHLSG*QLQFPR
Trigger: TCTTGGGAACTGCAGCTGCAATCCCGACAAATGCAA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTGATCAGATAATAATCTaGCATTTGTCGGGATTGCAG +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESDQIII*HLSGLQ
Trigger: CTGCAATCCCGACAAATGCAAGATTATTATCTGATC...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCTACCGTTTCAGCAGTaGGTTTGGAATGATCAGATA +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHALPFQQ*VWNDQI
Trigger: TATCTGATCATTCCAAACCAACTGCTGAAACGGTAG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTCTTGGCTAGAACTCTaGCCCTGTTCTGCTGACTGT +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANISWLEL*PCSADC
Trigger: ACAGTCAGCAGAACAGGGCAAGAGTTCTAGCCAAGA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTACCATCACTGTCCTCTaGATCCTTCAATCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANITITVL*ILQSQL
Trigger: GAGCTGGGATTGAAGGATCAAGAGGACAGTGATGGT...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCTCCATTGGAAATATTaGGATCCTGCTCTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHALHWKY*DPALGF
Trigger: GAAACCAAGAGCAGGATCCAAATATTTCCAATGGAG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTCTTCCTCTTCTCCATaGGAAATATTTGGATCCTGC +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHASSSSP*EIFGSC
Trigger: GCAGGATCCAAATATTTCCAATGGAGAAGAGGAAGA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTTCTGTCTTTCTTTCTaGGTTATCATTGTGGGTACC +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESFCLSF*VIIVGT
Trigger: GGTACCCACAATGATAACCAAGAAAGAAAGACAGAA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTCAAAATATCATCAGATaGGGTATTGTCTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESQNIIR*GIVFLL
Trigger: CAGGAGGAAGACAATACCCAATCTGATGATATTTTG...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTTTTCTTCTGTCTCTTaGTGGTTGCTGATAGCTTCT +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESFSSVS*WLLIAS
Trigger: AGAAGCTATCAGCAACCACAAAGAGACAGAAGAAAA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTACGTTTCCTCCTCATTaGATGAGTTCTCTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHATFPPH*MSSLLS
Trigger: AGAAAGCAGAGAACTCATCAAATGAGGAGGAAACGT...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTCTATCCATAGGGTGTaGGTCAAGTTCACTAAACTG +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHASIHRV*VKFTKL
Trigger: CAGTTTAGTGAACTTGACCAACACCCTATGGATAGA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTGTGATGTGCTTATCCTaGTTGGGGTCACACTCCTCA +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIVMCLS*LGSHSS
Trigger: TGAGGAGTGTGACCCCAACAAGGATAAGCACATCAC...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCTGGTGCATAGGTTGTaGTCAAGCAATTACTCTCAT +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHALVHRL*SSNYSH
Trigger: ATGAGAGTAATTGCTTGACAACAACCTATGCACCAG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTACCTGGTGCATAGGTaGTTGTCAAGCAATTACTCT +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAYLVHR*LSSNYS
Trigger: AGAGTAATTGCTTGACAACAACCTATGCACCAGGTA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTTCATGCTTTCCAGATTaGGCAAAATGCACTTCTTTG +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESSCFPD*AKCTSL
Trigger: CAAAGAAGTGCATTTTGCCAAATCTGGAAAGCATGA...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418378.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAGACTGTCATCGTTTTaGTTGCAGATTCCTGGATTT +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHARLSSF*LQIPGF
Trigger: AAATCCAGGAATCTGCAACAAAAACGATGACAGTCT...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCCAATGTACCTTCAGTaGGTGCATACTCCAAATTCA +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANPMYLQ*VHTPNS
Trigger: TGAATTTGGAGTATGCACCAACTGAAGGTACATTGG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTATTTCTAGGTTGTTCTaGGTTTTCCTCTCTCTTTGT +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESISRLF*VFLSLC
Trigger: ACAAAGAGAGAGGAAAACCAAGAACAACCTAGAAAT...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCTTTCTTGGTTATCATaGTGGGTACCAACTTCACCT +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANLSWLS*WVPTSP
Trigger: AGGTGAAGTTGGTACCCACAATGATAACCAAGAAAG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTTCTGTCTTTCTTTCTaGGTTATCATTGTGGGTACC +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAFCLSF*VIIVGT
Trigger: GGTACCCACAATGATAACCAAGAAAGAAAGACAGAA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTCATCAGATTGGGTATaGTCTTCCTCCTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANISSDWV*SSSCLL
Trigger: CAGCAAGCAGGAGGAAGACAATACCCAATCTGATGA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTCAAAATATCATCAGATaGGGTATTGTCTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAQNIIR*GIVFLL
Trigger: CAGGAGGAAGACAATACCCAATCTGATGATATTTTG...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTCTTGCTTACTTGAGTaGGTTGATCAGACTCTTCCA +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANSCLLE*VDQTLP
Trigger: TGGAAGAGTCTGATCAACCAACTCAAGTAAGCAAGA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTGTTATCTTCTTGTTCTaGGTTACCCTGATCAAATTC +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESVIFLF*VTLIKF
Trigger: GAATTTGATCAGGGTAACCAAGAACAAGAAGATAAC...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTGCCAGTTTTACCCTCTaGACTCTGCCATTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIASFTL*TLPFSF
Trigger: GAAACTGAATGGCAGAGTCAAGAGGGTAAAACTGGC...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTTTTCTTCTGTCTCTTaGTGGTTGCTGATAGCTTCT +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAFSSVS*WLLIAS
Trigger: AGAAGCTATCAGCAACCACAAAGAGACAGAAGAAAA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACACGTTTCCTCCTCATTaGATGAGTTCTCTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANTFPPH*MSSLLS
Trigger: AGAAAGCAGAGAACTCATCAAATGAGGAGGAAACGT...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTGATCAAGGGGTTTTGTaGGAGGACAAGTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIDQGVL*EDKSLD
Trigger: ATCCAGTGACTTGTCCTCCAACAAAACCCCTTGATC...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTGTCAGTGCCACAAACTaGATCAAGGGGTTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIVSATN*IKGFCW
Trigger: CCAACAAAACCCCTTGATCAAGTTTGTGGCACTGAC...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTATGTGCTTATCCTTGTaGGGGTCACACTCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIMCLSL*GSHSSK
Trigger: CTTTGAGGAGTGTGACCCCAACAAGGATAAGCACAT...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCTGGTGCATAGGTTGTaGTCAAGCAATTACTCTCAT +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANLVHRL*SSNYSH
Trigger: ATGAGAGTAATTGCTTGACAACAACCTATGCACCAG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTACCTGGTGCATAGGTaGTTGTCAAGCAATTACTCT +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANYLVHR*LSSNYS
Trigger: AGAGTAATTGCTTGACAACAACCTATGCACCAGGTA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp TCACAGCTGCATATATTTCTGAAGTGGTTAGAACAGAGGAGGATGCTGGAAAGTATGCACTTCTTTGTGTaGAAGGAAAAGGCTTATCTT +
Preference number: 5 (lower is better)
Translates to: SQLHIFLKWLEQRRMLESMHFFV*KEKAYL
Trigger: AAGATAAGCCTTTTCCTTCAACACAAAGAAGTGCAT...ACTTTCCAGCATCCTCCTCTGTTCTAACCACTTCAGAAATATATGCAGCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418378.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTATAATAATCTTGCATTaGTCTTGGCCTCCCAAAGTG +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAIIILH*SWPPKV
Trigger: CACTTTGGGAGGCCAAGACAAATGCAAGATTATTAT...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTGCAGAAAAATTGAAGTaGAATCCCCTCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIAEKLK*NPLCTQ
Trigger: CTGTGTGCAGAGGGGATTCAACTTCAATTTTTCTGC...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTTGTGATACTTTCTTGTaGGTTAGAATCTGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHACDTFL*VRICEG
Trigger: TCCTTCACAGATTCTAACCAACAAGAAAGTATCACA...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACTTCTGTCTTTCTTTCTaGGTTATCATTGTGGGTACC +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANFCLSF*VIIVGT
Trigger: GGTACCCACAATGATAACCAAGAAAGAAAGACAGAA...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCAAAATATCATCAGATaGGGTATTGTCTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANQNIIR*GIVFLL
Trigger: CAGGAGGAAGACAATACCCAATCTGATGATATTTTG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTCTGCATCTTGCTTACTaGAGTTGGTTGATCAGACTC +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANILHLAY*SWLIRL
Trigger: GAGTCTGATCAACCAACTCAAGTAAGCAAGATGCAG...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CTGGTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTGTTATCTTCTTGTTCTaGGTTACCCTGATCAAATTC +
Preference number: 5 (lower is better)
Translates to: LVHRLLSSNYSHCLVIHAVIFLF*VTLIKF
Trigger: GAATTTGATCAGGGTAACCAAGAACAAGAAGATAAC...AGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCACCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS GCA 90 bp TTGAATGTGCTTATTGACGTTCGATGCATTTTCCTCTTCCATTTCTaGATTGGAGTTATCTTCTTGTTCTTGGTTACCCTGATCAAATTC +
Preference number: 5 (lower is better)
Translates to: LNVLIDVRCIFLFHF*IGVIFLFLVTLIKF
Trigger: GAATTTGATCAGGGTAACCAAGAACAAGAAGATAACTCCAATGCAGAAATGGAAGAGGAAAATGCATCGAACGTCAATAAGCACATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTCTACCGTTTCAGCAGTaGGTTTGGAATGATCAGATA +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANILPFQQ*VWNDQI
Trigger: TATCTGATCATTCCAAACCAACTGCTGAAACGGTAG...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTCTAGGTTGTTCTaGGTTTTCCTCTCTCTTTGT +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANISRLF*VFLSLC
Trigger: ACAAAGAGAGAGGAAAACCAAGAACAACCTAGAAAT...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTCTTCCTCTTCTCCATaGGAAATATTTGGATCCTGC +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANISSSSP*EIFGSC
Trigger: GCAGGATCCAAATATTTCCAATGGAGAAGAGGAAGA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTCTTTCTTGGTTATCATaGTGGGTACCAACTTCACCT +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANILSWLS*WVPTSP
Trigger: AGGTGAAGTTGGTACCCACAATGATAACCAAGAAAG...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTCTTGCTTACTTGAGTaGGTTGATCAGACTCTTCCA +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANISCLLE*VDQTLP
Trigger: TGGAAGAGTCTGATCAACCAACTCAAGTAAGCAAGA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTCTATCCATAGGGTGTaGGTCAAGTTCACTAAACTG +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANISIHRV*VKFTKL
Trigger: CAGTTTAGTGAACTTGACCAACACCCTATGGATAGA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTACCTGGTGCATAGGTaGTTGTCAAGCAATTACTCT +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIYLVHR*LSSNYS
Trigger: AGAGTAATTGCTTGACAACAACCTATGCACCAGGTA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp GTGCATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACCATATTAGGTTTGGTTaGCTCCTTTGCTTCTTATCT +
Preference number: 5 (lower is better)
Translates to: VHRLLSSNYSHCLVIHANHIRFG*LLCFLS
Trigger: AGATAAGAAGCAAAGGAGCAAACCAAACCTAATATG...GTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTGATCAGATAATAATCTaGCATTTGTCGGGATTGCAG +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIDQIII*HLSGLQ
Trigger: CTGCAATCCCGACAAATGCAAGATTATTATCTGATC...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282470.11
ENST00000418378.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTGGATTCATATTAGGTTaGGTTTGCTCCTTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIGFILG*VCSFAS
Trigger: AGAAGCAAAGGAGCAAACCAAACCTAATATGAATCC...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTTGTGATACTTTCTTGTaGGTTAGAATCTGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANICDTFL*VRICEG
Trigger: TCCTTCACAGATTCTAACCAACAAGAAAGTATCACA...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTATTTCTAGGTTGTTCTaGGTTTTCCTCTCTCTTTGT +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIISRLF*VFLSLC
Trigger: ACAAAGAGAGAGGAAAACCAAGAACAACCTAGAAAT...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS-3UTR CAA 90 bp CATAGGTTGTTGTCAAGCAATTACTCTCATTGTCTTGTCATACATGCTAACATTGTTATCTTCTTGTTCTaGGTTACCCTGATCAAATTC +
Preference number: 5 (lower is better)
Translates to: HRLLSSNYSHCLVIHANIVIFLF*VTLIKF
Trigger: GAATTTGATCAGGGTAACCAAGAACAAGAAGATAAC...AATGTTAGCATGTATGACAAGACAATGAGAGTAATTGCTTGACAACAACCTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS GCA 72 bp CAGAAAGGCCTGGCTTGGGATGAAGTAGTCATCACTTaGACTGTGCCTGGGGCCATCAGTGCCGCCATCATC +
Preference number: 6 (lower is better)
Translates to: QKGLAWDEVVIT*TVPGAISAAII
Trigger: GATGATGGCGGCACTGATGGCCCCAGGCACAGTGCAAGTGATGACTACTTCATCCCAAGCCAGGCCTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CAA 90 bp TCCCTAGCAGGCTGGCCTCTCATGCGAGGGCTTTACAGGCAGTGCTaGCAAACCAAAAGGGAAAGAGCTAATTCTGGTGGCGTGGATGGG +
Preference number: 6 (lower is better)
Translates to: SLAGWPLMRGLYRQC*QTKRERANSGGVDG
Trigger: CCCATCCACGCCACCAGAATTAGCTCTTTCCCTTTTGGTTTGCAAGCACTGCCTGTAAAGCCCTCGCATGAGAGGCCAGCCTGCTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418378.5
ENST00000434434.5
CDS GCA 72 bp AGTAGTCATCACTTGCACTGTGCCTGGGGCCATCAGTaGCGCCATCATCGCCATCATCATCGCCATCATCAT +
Preference number: 6 (lower is better)
Translates to: SSHHLHCAWGHQ*RHHRHHHRHHH
Trigger: ATGATGATGGCGATGATGATGGCGATGATGGCGGCACTGATGGCCCCAGGCACAGTGCAAGTGATGACTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS GCA 72 bp CCTTGTTGGGGTCACACTCCTCAAAGAAACGGGTTATaGAGTGTTCCATGGGCACCAGAGATGCTCGCAGAG +
Preference number: 6 (lower is better)
Translates to: PCWGHTPQRNGL*SVPWAPEMLAE
Trigger: CTCTGCGAGCATCTCTGGTGCCCATGGAACACTGCATAACCCGTTTCTTTGAGGAGTGTGACCCCAACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CAA 72 bp GGCTGGCCTCTCATGCGAGGGCTTTACAGGCAGTGCTaGCAAACCAAAAGGGAAAGAGCTAATTCTGGTGGC +
Preference number: 6 (lower is better)
Translates to: GWPLMRGLYRQC*QTKRERANSGG
Trigger: GCCACCAGAATTAGCTCTTTCCCTTTTGGTTTGCAAGCACTGCCTGTAAAGCCCTCGCATGAGAGGCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418378.5
ENST00000434434.5
CDS TCA 72 bp GTTGGAGGACAAGTCACTGGATCCTGGCAGACACAGTaGGGTTTTCCCTGTTGGTCTGCCTTACAGATGTGG +
Preference number: 6 (lower is better)
Translates to: VGGQVTGSWQTQ*GFPCWSALQMW
Trigger: CCACATCTGTAAGGCAGACCAACAGGGAAAACCTCACTGTGTCTGCCAGGATCCAGTGACTTGTCCTCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS GCA 72 bp GCAGGCTGGCCTCTCATGCGAGGGCTTTACAGGCAGTaGTTGCAAACCAAAAGGGAAAGAGCTAATTCTGGT +
Preference number: 6 (lower is better)
Translates to: AGWPLMRGLYRQ*LQTKRERANSG
Trigger: ACCAGAATTAGCTCTTTCCCTTTTGGTTTGCAAGCACTGCCTGTAAAGCCCTCGCATGAGAGGCCAGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418378.5
ENST00000434434.5
CDS CCA 72 bp CACACTCCTCAAAGAAACGGGTTATGCAGTGTTCCATaGGCACCAGAGATGCTCGCAGAGGAGCAAGTTCAG +
Preference number: 6 (lower is better)
Translates to: HTPQRNGLCSVP*APEMLAEEQVQ
Trigger: CTGAACTTGCTCCTCTGCGAGCATCTCTGGTGCCCATGGAACACTGCATAACCCGTTTCTTTGAGGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CCA 72 bp GTTTTTGTTGCAGATTCCTGGATTTCCCTAGCAGGCTaGCCTCTCATGCGAGGGCTTTACAGGCAGTGCTTG +
Preference number: 6 (lower is better)
Translates to: VFVADSWISLAG*PLMRGLYRQCL
Trigger: CAAGCACTGCCTGTAAAGCCCTCGCATGAGAGGCCAGCCTGCTAGGGAAATCCAGGAATCTGCAACAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418378.5
ENST00000434434.5
ENST00000541496.1
CDS CAA 72 bp TGGCCCCACTCCTTCAGGGTGATGTGCTTATCCTTGTaGGGGTCACACTCCTCAAAGAAACGGGTTATGCAG +
Preference number: 6 (lower is better)
Translates to: WPHSFRVMCLSL*GSHSSKKRVMQ
Trigger: CTGCATAACCCGTTTCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACATCACCCTGAAGGAGTGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CAA 72 bp CAGTGGCCCCACTCCTTCAGGGTGATGTGCTTATCCTaGTTGGGGTCACACTCCTCAAAGAAACGGGTTATG +
Preference number: 6 (lower is better)
Translates to: QWPHSFRVMCLS*LGSHSSKKRVM
Trigger: CATAACCCGTTTCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACATCACCCTGAAGGAGTGGGGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CAA 90 bp CCAAAGCAGTGGCCCCACTCCTTCAGGGTGATGTGCTTATCCTTGTaGGGGTCACACTCCTCAAAGAAACGGGTTATGCAGTGTTCCATG +
Preference number: 6 (lower is better)
Translates to: PKQWPHSFRVMCLSL*GSHSSKKRVMQCSM
Trigger: CATGGAACACTGCATAACCCGTTTCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACATCACCCTGAAGGAGTGGGGCCACTGCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CAA 90 bp ATTCCAAAGCAGTGGCCCCACTCCTTCAGGGTGATGTGCTTATCCTaGTTGGGGTCACACTCCTCAAAGAAACGGGTTATGCAGTGTTCC +
Preference number: 6 (lower is better)
Translates to: IPKQWPHSFRVMCLS*LGSHSSKKRVMQCS
Trigger: GGAACACTGCATAACCCGTTTCTTTGAGGAGTGTGACCCCAACAAGGATAAGCACATCACCCTGAAGGAGTGGGGCCACTGCTTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CAA 72 bp TCTTTGCTCCTCAATTTTGAGGTGATAGGCAATGGATaGAGCTCTCTCGGCCTCCAGAAAGGCCTGGCTTGG +
Preference number: 6 (lower is better)
Translates to: SLLLNFEVIGNG*SSLGLQKGLAW
Trigger: CCAAGCCAGGCCTTTCTGGAGGCCGAGAGAGCTCAATCCATTGCCTATCACCTCAAAATTGAGGAGCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CAA 90 bp AGGACAAGTCACTGGATCCTGGCAGACACAGTGAGGTTTTCCCTGTaGGTCTGCCTTACAGATGTGGCCTCTTTTACACTGGAAGCTCAT +
Preference number: 6 (lower is better)
Translates to: RTSHWILADTVRFSL*VCLTDVASFTLEAH
Trigger: ATGAGCTTCCAGTGTAAAAGAGGCCACATCTGTAAGGCAGACCAACAGGGAAAACCTCACTGTGTCTGCCAGGATCCAGTGACTTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CCA 72 bp TGTTGGTCTGCCTTACAGATGTGGCCTCTTTTACACTaGAAGCTCATGCAAGAATCCACAGCATGCACCCTC +
Preference number: 6 (lower is better)
Translates to: CWSALQMWPLLH*KLMQESTACTL
Trigger: GAGGGTGCATGCTGTGGATTCTTGCATGAGCTTCCAGTGTAAAAGAGGCCACATCTGTAAGGCAGACCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CAA 72 bp GATTGTCAGTGCCACAAACTTGATCAAGGGGTTTTGTaGGAGGACAAGTCACTGGATCCTGGCAGACACAGT +
Preference number: 6 (lower is better)
Translates to: DCQCHKLDQGVL*EDKSLDPGRHS
Trigger: ACTGTGTCTGCCAGGATCCAGTGACTTGTCCTCCAACAAAACCCCTTGATCAAGTTTGTGGCACTGACAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CAA 72 bp TCTGATTGTCAGTGCCACAAACTTGATCAAGGGGTTTaGTTGGAGGACAAGTCACTGGATCCTGGCAGACAC +
Preference number: 6 (lower is better)
Translates to: SDCQCHKLDQGV*LEDKSLDPGRH
Trigger: GTGTCTGCCAGGATCCAGTGACTTGTCCTCCAACAAAACCCCTTGATCAAGTTTGTGGCACTGACAATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CAA 90 bp AGCCACGGCTTCTGGCCAAAGTACAGGATTCATATTAGGTTTGGTTaGCTCCTTTGCTTCTTATCTCCTTTTCACCGGGATTGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SHGFWPKYRIHIRFG*LLCFLSPFHRDCSC
Trigger: GCAGCTGCAATCCCGGTGAAAAGGAGATAAGAAGCAAAGGAGCAAACCAAACCTAATATGAATCCTGTACTTTGGCCAGAAGCCGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503414.5
CDS CAA 90 bp TACTTTTTCTCTTTGCTCCTCAATTTTGAGGTGATAGGCAATGGATaGAGCTCTCTCGGCCTCCAGAAAGGCCTGGCTTGGGATGAAGTA +
Preference number: 6 (lower is better)
Translates to: YFFSLLLNFEVIGNG*SSLGLQKGLAWDEV
Trigger: TACTTCATCCCAAGCCAGGCCTTTCTGGAGGCCGAGAGAGCTCAATCCATTGCCTATCACCTCAAAATTGAGGAGCAAAGAGAAAAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CAA 90 bp CTGCTTGCTGTTAGCATGCTCCCTGGGCAATTCTGTCTTTCTTTCTaGGTTATCATTGTGGGTACCAACTTCACCTGGCTCTTTTTCTTC +
Preference number: 6 (lower is better)
Translates to: LLAVSMLPGQFCLSF*VIIVGTNFTWLFFF
Trigger: GAAGAAAAAGAGCCAGGTGAAGTTGGTACCCACAATGATAACCAAGAAAGAAAGACAGAATTGCCCAGGGAGCATGCTAACAGCAAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS TCA 72 bp TCATCGCCATCATCATCGCCATCATCATCAACTCCATaGTTTCTGGGCGTGGTATTACCATCATCAGTAGGT +
Preference number: 6 (lower is better)
Translates to: SSPSSSPSSSTP*FLGVVLPSSVG
Trigger: ACCTACTGATGATGGTAATACCACGCCCAGAAATCATGGAGTTGATGATGATGGCGATGATGATGGCGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS GCA 72 bp TCCAAAATATCATCAGATTGGGTATTGTCTTCCTCCTaGTTGCTGTTAGCATGCTCCCTGGGCAATTCTGTC +
Preference number: 6 (lower is better)
Translates to: SKISSDWVLSSS*LLLACSLGNSV
Trigger: GACAGAATTGCCCAGGGAGCATGCTAACAGCAAGCAGGAGGAAGACAATACCCAATCTGATGATATTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CCA 72 bp TTAGCATGCTCCCTGGGCAATTCTGTCTTTCTTTCTTaGTTATCATTGTGGGTACCAACTTCACCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: LACSLGNSVFLS*LSLWVPTSPGS
Trigger: AGAGCCAGGTGAAGTTGGTACCCACAATGATAACCAAGAAAGAAAGACAGAATTGCCCAGGGAGCATGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CCA 72 bp AGTTCAGAATGTGTCAAGACTCTATCCATAGGGTGTTaGTCAAGTTCACTAAACTGCCAGTGCACAGGATAC +
Preference number: 6 (lower is better)
Translates to: SSECVKTLSIGC*SSSLNCQCTGY
Trigger: GTATCCTGTGCACTGGCAGTTTAGTGAACTTGACCAACACCCTATGGATAGAGTCTTGACACATTCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CCA 72 bp CAGTGTTGTCAGGTGCTACCGTTTCAGCAGTTGGTTTaGAATGATCAGATAATAATCTTGCATTTGTCGGGA +
Preference number: 6 (lower is better)
Translates to: QCCQVLPFQQLV*NDQIIILHLSG
Trigger: TCCCGACAAATGCAAGATTATTATCTGATCATTCCAAACCAACTGCTGAAACGGTAGCACCTGACAACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000434434.5
ENST00000458304.2
ENST00000509407.5
ENST00000512317.5
ENST00000535835.5
ENST00000543631.5
CDS CAA 90 bp TTAAACTGGGGATTGCAGTGTTGTCAGGTGCTACCGTTTCAGCAGTaGGTTTGGAATGATCAGATAATAATCTTGCATTTGTCGGGATTG +
Preference number: 6 (lower is better)
Translates to: LNWGLQCCQVLPFQQ*VWNDQIIILHLSGL
Trigger: CAATCCCGACAAATGCAAGATTATTATCTGATCATTCCAAACCAACTGCTGAAACGGTAGCACCTGACAACACTGCAATCCCCAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000434434.5
ENST00000458304.2
ENST00000509407.5
ENST00000512317.5
ENST00000535835.5
ENST00000543631.5
CDS CAA 90 bp CCTGAGGCTCACTCATATCTTCTTTTATGTCCAATGTACCTTCAGTaGGTGCATACTCCAAATTCACACTTAAGTGACCATCACTGTCCT +
Preference number: 6 (lower is better)
Translates to: PEAHSYLLLCPMYLQ*VHTPNSHLSDHHCP
Trigger: AGGACAGTGATGGTCACTTAAGTGTGAATTTGGAGTATGCACCAACTGAAGGTACATTGGACATAAAAGAAGATATGAGTGAGCCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000434434.5
ENST00000503414.5
ENST00000509407.5
ENST00000541496.1
CDS CAA 90 bp TTAAACTGGGGATTGCAGTGTTGTCAGGTGCTACCGTTTCAGCAGTaGGTTTGGAATGATCAGATAATAATCTTGCATTTGTCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: LNWGLQCCQVLPFQQ*VWNDQIIILHLSWP
Trigger: AGGCCAAGACAAATGCAAGATTATTATCTGATCATTCCAAACCAACTGCTGAAACGGTAGCACCTGACAACACTGCAATCCCCAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503414.5
CDS CCA 72 bp CAGTGTTGTCAGGTGCTACCGTTTCAGCAGTTGGTTTaGAATGATCAGATAATAATCTTGCATTTGTCTTGG +
Preference number: 6 (lower is better)
Translates to: QCCQVLPFQQLV*NDQIIILHLSW
Trigger: CCAAGACAAATGCAAGATTATTATCTGATCATTCCAAACCAACTGCTGAAACGGTAGCACCTGACAACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503414.5
CDS CAA 72 bp GGATTGCAGTGTTGTCAGGTGCTACCGTTTCAGCAGTaGGTTTGGAATGATCAGATAATAATCTTGCATTTG +
Preference number: 6 (lower is better)
Translates to: GLQCCQVLPFQQ*VWNDQIIILHL
Trigger: CAAATGCAAGATTATTATCTGATCATTCCAAACCAACTGCTGAAACGGTAGCACCTGACAACACTGCAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000434434.5
ENST00000458304.2
ENST00000503414.5
ENST00000509407.5
ENST00000512317.5
ENST00000535835.5
ENST00000541496.1
ENST00000543631.5
CDS CAA 90 bp ACCCTGATCAAATTCATCCTCCTGCATCTTGCTTACTTGAGTTGGTaGATCAGACTCTTCCAAAATATCATCAGATTGGGTATTGTCTTC +
Preference number: 6 (lower is better)
Translates to: TLIKFILLHLAYLSW*IRLFQNIIRLGIVF
Trigger: GAAGACAATACCCAATCTGATGATATTTTGGAAGAGTCTGATCAACCAACTCAAGTAAGCAAGATGCAGGAGGATGAATTTGATCAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS GCA 72 bp CTTATTGACGTTCGATGCATTTTCCTCTTCCATTTCTaGATTGGAGTTATCTTCTTGTTCTTGGTTACCCTG +
Preference number: 6 (lower is better)
Translates to: LIDVRCIFLFHF*IGVIFLFLVTL
Trigger: CAGGGTAACCAAGAACAAGAAGATAACTCCAATGCAGAAATGGAAGAGGAAAATGCATCGAACGTCAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CCA 72 bp CAGTGTTGTCAGGTGCTACCGTTTCAGCAGTTGGTTTaGAATGATCAGATAATAATCTTGCATTTGTCTGAA +
Preference number: 6 (lower is better)
Translates to: QCCQVLPFQQLV*NDQIIILHLSE
Trigger: TTCAGACAAATGCAAGATTATTATCTGATCATTCCAAACCAACTGCTGAAACGGTAGCACCTGACAACACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541496.1
CDS CAA 72 bp ACCCTGATCAAATTCATCCTCCTGCATCTTGCTTACTaGAGTTGGTTGATCAGACTCTTCCAAAATATCATC +
Preference number: 6 (lower is better)
Translates to: TLIKFILLHLAY*SWLIRLFQNII
Trigger: GATGATATTTTGGAAGAGTCTGATCAACCAACTCAAGTAAGCAAGATGCAGGAGGATGAATTTGATCAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CAA 72 bp AAATTCATCCTCCTGCATCTTGCTTACTTGAGTTGGTaGATCAGACTCTTCCAAAATATCATCAGATTGGGT +
Preference number: 6 (lower is better)
Translates to: KFILLHLAYLSW*IRLFQNIIRLG
Trigger: ACCCAATCTGATGATATTTTGGAAGAGTCTGATCAACCAACTCAAGTAAGCAAGATGCAGGAGGATGAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000503414.5
CDS CAA 72 bp CACTCATATCTTCTTTTATGTCCAATGTACCTTCAGTaGGTGCATACTCCAAATTCACACTTAAGTGACCAT +
Preference number: 6 (lower is better)
Translates to: HSYLLLCPMYLQ*VHTPNSHLSDH
Trigger: ATGGTCACTTAAGTGTGAATTTGGAGTATGCACCAACTGAAGGTACATTGGACATAAAAGAAGATATGAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282470.11
ENST00000418378.5
ENST00000434434.5
ENST00000503414.5
ENST00000509407.5
ENST00000535835.5
ENST00000541496.1