RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPAG6 (Homo sapiens)

Ensembl gene IDs: ENSG00000077327

Ensembl transcript IDs: ENST00000313311.10, ENST00000376603.6, ENST00000376624.8, ENST00000435326.5, ENST00000456231.6, ENST00000487973.1, ENST00000488555.5, ENST00000490361.5, ENST00000538630.2

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTTGAAACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATaGCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAAC +
Preference number: 1 (lower is better)
Translates to: FETWESDVRTRIHFT*LLLCSFMSRARLRN
Trigger: GTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGTTTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
3UTR-3UTR TCA 90 bp CTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTCCCTCGCTGGGCCCATaGAAGGTAAGGAACACTTTA +
Preference number: 2 (lower is better)
Translates to: LGKVTLGQGSILHACFFVPSLGP*KVRNTL
Trigger: TAAAGTGTTCCTTACCTTTCATGGGCCCAGCGAGGG...AACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
3UTR-3UTR GCA 90 bp CTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTCTCATTGGAGGTGTCTaGATGTACGAGTGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: LGKVTLGQGSILHACFFVLIGGV*MYECVW
Trigger: CCACACACACTCGTACATGCAGACACCTCCAATGAG...AACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
3UTR-3UTR GCA 90 bp ACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCACTCATTGGAGGTGTCTaGATGTACGAGTGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: TCLLLCSFMSRARLRNLSLIGGV*MYECVW
Trigger: CCACACACACTCGTACATGCAGACACCTCCAATGAG...TGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
3UTR-3UTR TCA 90 bp ACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCATATAACTCTCTATTCTaGATTCTACCCTCGCTGGGC +
Preference number: 2 (lower is better)
Translates to: TCLLLCSFMSRARLRNLSYNSLF*ILPSLG
Trigger: GCCCAGCGAGGGTAGAATTCAGAATAGAGAGTTATA...TGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
3UTR-3UTR GCA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAGTAGAACAAATCCTATaGATGCGAATGACCATGAAT +
Preference number: 2 (lower is better)
Translates to: ASESPSSALYICHQFPPSVEQIL*MRMTMN
Trigger: ATTCATGGTCATTCGCATGCATAGGATTTGTTCTAC...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
3UTR-3UTR GCA 90 bp GAAACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTGAGGGAGAGCATGTATaGAGGAGTATAACTCTCTAT +
Preference number: 2 (lower is better)
Translates to: ETWESDVRTRIHFTCLLLEGEHV*RSITLY
Trigger: ATAGAGAGTTATACTCCTGCATACATGCTCTCCCTC...AAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
3UTR-3UTR CCA 90 bp AGCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCTTAACTATATCTCATTaGAGGTGTCTGCATGTACGA +
Preference number: 2 (lower is better)
Translates to: SIRVSFKCPVYLSSVSSFLTISH*RCLHVR
Trigger: TCGTACATGCAGACACCTCCAATGAGATATAGTTAA...GAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
3UTR-3UTR CCA 90 bp CTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTGTGGGGAAGGAGGTTTaGAAAACTTGTGATAAAGAG +
Preference number: 2 (lower is better)
Translates to: LGKVTLGQGSILHACFFVVGKEV*KTCDKE
Trigger: CTCTTTATCACAAGTTTTCCAAACCTCCTTCCCCAC...AACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
3UTR-3UTR CCA 90 bp ACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTGTGACTTTTGAAACTTaGGAAAGTGACGTTAGGACA +
Preference number: 2 (lower is better)
Translates to: TWESDVRTRIHFTCLLLCVTFET*ESDVRT
Trigger: TGTCCTAACGTCACTTTCCCAAGTTTCAAAAGTCAC...ACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
3UTR-3UTR GCA 90 bp CTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTGTAGAACAAATCCTATaGATGCGAATGACCATGAAT +
Preference number: 2 (lower is better)
Translates to: LGKVTLGQGSILHACFFVVEQIL*MRMTMN
Trigger: ATTCATGGTCATTCGCATGCATAGGATTTGTTCTAC...AACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
3UTR-3UTR CCA 90 bp ACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTTAACTATATCTCATTaGAGGTGTCTGCATGTACGA +
Preference number: 2 (lower is better)
Translates to: TWESDVRTRIHFTCLLLCLTISH*RCLHVR
Trigger: TCGTACATGCAGACACCTCCAATGAGATATAGTTAA...ACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
3UTR-3UTR CCA 90 bp TGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAGGGAGAGCATTAACTATATCTCATTaGAGGTGTCTGCATGTACGA +
Preference number: 2 (lower is better)
Translates to: CSFMSRARLRNLSMRGRALTISH*RCLHVR
Trigger: TCGTACATGCAGACACCTCCAATGAGATATAGTTAA...TGCTCTCCCTCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
3UTR-3UTR CCA 90 bp CATTTTACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACGTGGGGAAGGAGGTTTaGAAAACTTGTGATAAAGAG +
Preference number: 2 (lower is better)
Translates to: HFTCLLLCSFMSRARLRNVGKEV*KTCDKE
Trigger: CTCTTTATCACAAGTTTTCCAAACCTCCTTCCCCAC...GTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGTAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
3UTR-3UTR GCA 90 bp CATTTTACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACGTAGAACAAATCCTATaGATGCGAATGACCATGAAT +
Preference number: 2 (lower is better)
Translates to: HFTCLLLCSFMSRARLRNVEQIL*MRMTMN
Trigger: ATTCATGGTCATTCGCATGCATAGGATTTGTTCTAC...GTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGTAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
3UTR GCA 72 bp TGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATaGCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGA +
Preference number: 3 (lower is better)
Translates to: WESDVRTRIHFT*LLLCSFMSRAR
Trigger: TCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
3UTR-3UTR CAA 90 bp AGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATTTTCAGTTATTAAGTGGTaGATAGCTGTCCACCCTCTG +
Preference number: 3 (lower is better)
Translates to: SLLQVPCISVISFLLQRFSVIKW*IAVHPL
Trigger: CAGAGGGTGGACAGCTATCAACCACTTAATAACTGA...AAATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS-3UTR GCA 90 bp GAAACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTGGAAGCCGCTCGGCCTaGGAGTCCACCAAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: ETWESDVRTRIHFTCLLLGSRSA*ESTKGA
Trigger: CGCCCCCTTGGTGGACTCGCAGGCCGAGCGGCTTCC...AAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR GCA 90 bp TGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAGGGAGAGCAGGAAGCCGCTCGGCCTaGGAGTCCACCAAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: CSFMSRARLRNLSMRGRAGSRSA*ESTKGA
Trigger: CGCCCCCTTGGTGGACTCGCAGGCCGAGCGGCTTCC...TGCTCTCCCTCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR TCA 90 bp AGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATTTTGCAGCACCTGCCTCTaGCTCATGGCGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: SLLQVPCISVISFLLQRFCSTCL*LMAPPP
Trigger: CGGCGGGGGCGCCATGAGTCAGAGGCAGGTGCTGCA...AAATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR GCA 90 bp AGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATTTGCCCTCCTCGAGCTCTaGGGGGAAGCCGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: SLLQVPCISVISFLLQRFALLEL*GEAARP
Trigger: AGGCCGAGCGGCTTCCCCGCAGAGCTCGAGGAGGGC...AAATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR CCA 90 bp AGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATCCAAGGGGGCGATCGTaGCGACGACTCGGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: RVSFKCPVYLSSVSSFKDPRGRS*RRLGLR
Trigger: TCGGAGGCCGAGTCGTCGCCACGATCGCCCCCTTGG...ATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR CCA 90 bp ACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCACCTGCCTCTGACTCATaGCGCCCCCGCCGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: TCLLLCSFMSRARLRNLSPASDS*RPRRRL
Trigger: CAGACGGCGGCGGGGGCGCCATGAGTCAGAGGCAGG...TGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR CCA 90 bp AGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATTTCCTGCCTCTGACTCATaGCGCCCCCGCCGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: SLLQVPCISVISFLLQRFPASDS*RPRRRL
Trigger: CAGACGGCGGCGGGGGCGCCATGAGTCAGAGGCAGG...AAATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR TCA 90 bp AGGCCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGTGCAGCACCTGCCTCTaGCTCATGGCGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: RPFNVFLKSTCRTNPMHACSTCL*LMAPPP
Trigger: CGGCGGGGGCGCCATGAGTCAGAGGCAGGTGCTGCA...CGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR GCA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTGGAAGCCGCTCGGCCTaGGAGTCCACCAAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: PVEQILCMRMTMNSSSHIGSRSA*ESTKGA
Trigger: CGCCCCCTTGGTGGACTCGCAGGCCGAGCGGCTTCC...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR GCA 90 bp GAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTGCCCTCCTCGAGCTCTaGGGGGAAGCCGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: EQILCMRMTMNSSSHIQAALLEL*GEAARP
Trigger: AGGCCGAGCGGCTTCCCCGCAGAGCTCGAGGAGGGC...AGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR GCA 90 bp AGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATAGCTCCGCCACCATCTaGACGAACTGGGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RVSFKCPVYLSSVSSFKDSSATI*TNWVLA
Trigger: GGCCAGGACCCAGTTCGTGCAGATGGTGGCGGAGCT...ATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR CCA 90 bp GAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTCCAAGGGGGCGATCGTaGCGACGACTCGGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: EQILCMRMTMNSSSHIQAPRGRS*RRLGLR
Trigger: TCGGAGGCCGAGTCGTCGCCACGATCGCCCCCTTGG...AGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR CCA 90 bp CATTTTACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCCAAGGGGGCGATCGTaGCGACGACTCGGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: HFTCLLLCSFMSRARLRNPRGRS*RRLGLR
Trigger: TCGGAGGCCGAGTCGTCGCCACGATCGCCCCCTTGG...GTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGTAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR CCA 90 bp GAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTGGGAGAGAGAGTCGGTaGAGCCCACCGCACCCGGGT +
Preference number: 4 (lower is better)
Translates to: EQILCMRMTMNSSSHIQAGRESR*SPPHPG
Trigger: ACCCGGGTGCGGTGGGCTCCACCGACTCTCTCTCCC...AGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS-3UTR TCA 90 bp AACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATTGCAGCACCTGCCTCTaGCTCATGGCGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: NVFLKSTCRTNPMHANDHCSTCL*LMAPPP
Trigger: CGGCGGGGGCGCCATGAGTCAGAGGCAGGTGCTGCA...ATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR GCA 90 bp AGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATTTAGCTCCGCCACCATCTaGACGAACTGGGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLLQVPCISVISFLLQRFSSATI*TNWVLA
Trigger: GGCCAGGACCCAGTTCGTGCAGATGGTGGCGGAGCT...AAATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR GCA 90 bp AGCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCGACTGCAACAGCCCGTaGGTGTTCAGGAGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: SIRVSFKCPVYLSSVSSFDCNSP*VFRSVS
Trigger: AGACACACTCCTGAACACGCACGGGCTGTTGCAGTC...GAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp AGCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCGTATTGCTCGAACACTaGGGGAGAGAGAGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: SIRVSFKCPVYLSSVSSFVLLEH*GRESRW
Trigger: CCACCGACTCTCTCTCCCGCAGTGTTCGAGCAATAC...GAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS-3UTR CCA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAGCGTCTCGATGTTTTaGGGTCTAGTCGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASESPSSALYICHQFPPSSVSMF*GLVASS
Trigger: GGAGCTGGCGACTAGACCCCAAAACATCGAGACGCT...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR TCA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAGCTTTGCAATATCACTaGGGGCCGAAGCAGCAATCC +
Preference number: 4 (lower is better)
Translates to: ASESPSSALYICHQFPPSALQYH*GPKQQS
Trigger: GGATTGCTGCTTCGGCCCTCAGTGATATTGCAAAGC...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCACTGGCAAAGTATTTGTaGCTGCAACAGCCCGTGCGT +
Preference number: 4 (lower is better)
Translates to: ASESPSSALYICHQFPPSLAKYL*LQQPVR
Trigger: ACGCACGGGCTGTTGCAGTCACAAATACTTTGCCAG...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp AGCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCGCGGCAGCACCTTACTaGACTGTCCAACCACATGTT +
Preference number: 4 (lower is better)
Translates to: SIRVSFKCPVYLSSVSSFAAAPY*TVQPHV
Trigger: AACATGTGGTTGGACAGTTCAGTAAGGTGCTGCCGC...GAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATAGCTCCGCCACCATCTaGACGAACTGGGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNSSATI*TNWVLA
Trigger: GGCCAGGACCCAGTTCGTGCAGATGGTGGCGGAGCT...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR CCA 90 bp AGCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCACCATCTGCACGAACTaGGTCCTGGCCTTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: SIRVSFKCPVYLSSVSSFTICTN*VLAFWY
Trigger: ATACCAGAAGGCCAGGACCCAGTTCGTGCAGATGGT...GAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR CCA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAACCATCTGCACGAACTaGGTCCTGGCCTTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: ASESPSSALYICHQFPPSTICTN*VLAFWY
Trigger: ATACCAGAAGGCCAGGACCCAGTTCGTGCAGATGGT...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR TCA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCACAATCGACTATTGCCTaGGCTAGCTGGGGAGAATGT +
Preference number: 4 (lower is better)
Translates to: ASESPSSALYICHQFPPSQSTIA*ASWGEC
Trigger: ACATTCTCCCCAGCTAGCTCAGGCAATAGTCGATTG...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp AGCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCATTACACCCGCGTTCTaGAGCGTCTCGATGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SIRVSFKCPVYLSSVSSFITPAF*SVSMFW
Trigger: CCAAAACATCGAGACGCTGCAGAACGCGGGTGTAAT...GAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR GCA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAGACCAGCGTATCCAGTaGTCCACAATCGACTATTGC +
Preference number: 4 (lower is better)
Translates to: ASESPSSALYICHQFPPSDQRIQ*STIDYC
Trigger: GCAATAGTCGATTGTGGAGCACTGGATACGCTGGTC...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCACTTTGCAGGACCCAATaGAGTCAATCACGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: ASESPSSALYICHQFPPSLCRTQ*SQSRQQ
Trigger: TTGCTGCCGTGATTGACTGCATTGGGTCCTGCAAAG...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTGACTGCAACAGCCCGTaGGTGTTCAGGAGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: TWESDVRTRIHFTCLLLCDCNSP*VFRSVS
Trigger: AGACACACTCCTGAACACGCACGGGCTGTTGCAGTC...ACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp GAAACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTCTGGCCTTCTGGTATTaGTCGAACACTGCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ETWESDVRTRIHFTCLLLLAFWY*SNTAGE
Trigger: CTCTCCCGCAGTGTTCGAGCAATACCAGAAGGCCAG...AAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS-3UTR CCA 90 bp AGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATGCACGAACTGGGTCCTaGCCTTCTGGTATTGCTCGA +
Preference number: 4 (lower is better)
Translates to: RVSFKCPVYLSSVSSFKDARTGS*PSGIAR
Trigger: TCGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGC...ATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR CCA 90 bp ACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTGCACGAACTGGGTCCTaGCCTTCTGGTATTGCTCGA +
Preference number: 4 (lower is better)
Translates to: TWESDVRTRIHFTCLLLCARTGS*PSGIAR
Trigger: TCGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGC...ACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR CCA 90 bp GAAACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTAGCGTCTCGATGTTTTaGGGTCTAGTCGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ETWESDVRTRIHFTCLLLSVSMF*GLVASS
Trigger: GGAGCTGGCGACTAGACCCCAAAACATCGAGACGCT...AAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR TCA 90 bp ACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTAGGCTGCAGCCTCCTTaGCTCCAGGGTCAAAATCTT +
Preference number: 4 (lower is better)
Translates to: TWESDVRTRIHFTCLLLCRLQPP*LQGQNL
Trigger: AAGATTTTGACCCTGGAGTCAAGGAGGCTGCAGCCT...ACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp GAAACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTAGGCTGCAGCCTCCTTaGCTCCAGGGTCAAAATCTT +
Preference number: 4 (lower is better)
Translates to: ETWESDVRTRIHFTCLLLRLQPP*LQGQNL
Trigger: AAGATTTTGACCCTGGAGTCAAGGAGGCTGCAGCCT...AAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp GAAACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTGCTTTGCAATATCACTaGGGGCCGAAGCAGCAATCC +
Preference number: 4 (lower is better)
Translates to: ETWESDVRTRIHFTCLLLALQYH*GPKQQS
Trigger: GGATTGCTGCTTCGGCCCTCAGTGATATTGCAAAGC...AAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTGCTTTGCAATATCACTaGGGGCCGAAGCAGCAATCC +
Preference number: 4 (lower is better)
Translates to: LGKVTLGQGSILHACFFVALQYH*GPKQQS
Trigger: GGATTGCTGCTTCGGCCCTCAGTGATATTGCAAAGC...AACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTCTGGCAAAGTATTTGTaGCTGCAACAGCCCGTGCGT +
Preference number: 4 (lower is better)
Translates to: LGKVTLGQGSILHACFFVLAKYL*LQQPVR
Trigger: ACGCACGGGCTGTTGCAGTCACAAATACTTTGCCAG...AACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTCTGGCCTTCTGGTATTaGTCGAACACTTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: LGKVTLGQGSILHACFFVLAFWY*SNTCST
Trigger: GGTGCTGCAAGTGTTCGAGCAATACCAGAAGGCCAG...AACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313311.10
ENST00000376624.8
CDS-3UTR GCA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCACAAAGTATTTGTGACTaGAACAGCCCGTGCGTGTTC +
Preference number: 4 (lower is better)
Translates to: ASESPSSALYICHQFPPSQSICD*NSPCVF
Trigger: GAACACGCACGGGCTGTTGCAGTCACAAATACTTTG...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp CTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTACCATCTGCACGAACTaGGTCCTGGCCTTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: LGKVTLGQGSILHACFFVTICTN*VLAFWY
Trigger: ATACCAGAAGGCCAGGACCCAGTTCGTGCAGATGGT...AACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR TCA 90 bp AGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATAAAGCAGCAGTCTGTTaGATTGTTGGGACCACGTCC +
Preference number: 4 (lower is better)
Translates to: RVSFKCPVYLSSVSSFKDKAAVC*IVGTTS
Trigger: GGACGTGGTCCCAACAATTCAACAGACTGCTGCTTT...ATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAATCCACCACAGCTTGTaGCAGTTCTGCATTATGTCT +
Preference number: 4 (lower is better)
Translates to: ASESPSSALYICHQFPPSIHHSL*QFCIMS
Trigger: AGACATAATGCAGAACTGTCACAAGCTGTGGTGGAT...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp TGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAGGGAGAGCAATCATCTGGGCTAAATaGGCAACAGCTCCTGCATCC +
Preference number: 4 (lower is better)
Translates to: CSFMSRARLRNLSMRGRAIIWAK*ATAPAS
Trigger: GGATGCAGGAGCTGTTGCTCATTTAGCCCAGATGAT...TGCTCTCCCTCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp AGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATTTCATAACCAAGCATCATaGTGCCAGGCAGCCGTGTGT +
Preference number: 4 (lower is better)
Translates to: SLLQVPCISVISFLLQRFHNQAS*CQAAVC
Trigger: ACACACGGCTGCCTGGCATCATGATGCTTGGTTATG...AAATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp ACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCACTGGCAAAGTATTTGTaGCTGCAACAGCCCGTGCGT +
Preference number: 4 (lower is better)
Translates to: TCLLLCSFMSRARLRNLSLAKYL*LQQPVR
Trigger: ACGCACGGGCTGTTGCAGTCACAAATACTTTGCCAG...TGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCATATAACTCTCTATTCTaGATTCTACCCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ASESPSSALYICHQFPPSYNSLF*ILPSLG
Trigger: GCCCAGCGAGGGTAGAATTCAGAATAGAGAGTTATA...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp AGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATTTCTGGCCTTCTGGTATTaGTCGAACACTTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: SLLQVPCISVISFLLQRFLAFWY*SNTCST
Trigger: GGTGCTGCAAGTGTTCGAGCAATACCAGAAGGCCAG...AAATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313311.10
ENST00000376624.8
CDS-3UTR GCA 90 bp AGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATATTACACCCGCGTTCTaGAGCGTCTCGATGTTTTGG +
Preference number: 4 (lower is better)
Translates to: RVSFKCPVYLSSVSSFKDITPAF*SVSMFW
Trigger: CCAAAACATCGAGACGCTGCAGAACGCGGGTGTAAT...ATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR GCA 90 bp GAAACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTGACCAGCGTATCCAGTaGTCCACAATCGACTATTGC +
Preference number: 4 (lower is better)
Translates to: ETWESDVRTRIHFTCLLLDQRIQ*STIDYC
Trigger: GCAATAGTCGATTGTGGAGCACTGGATACGCTGGTC...AAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp AGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATCTTTGCAGGACCCAATaGAGTCAATCACGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RVSFKCPVYLSSVSSFKDLCRTQ*SQSRQQ
Trigger: TTGCTGCCGTGATTGACTGCATTGGGTCCTGCAAAG...ATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTCTTTGCAGGACCCAATaGAGTCAATCACGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: TWESDVRTRIHFTCLLLCLCRTQ*SQSRQQ
Trigger: TTGCTGCCGTGATTGACTGCATTGGGTCCTGCAAAG...ACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp AGGCCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGGACTGCAACAGCCCGTaGGTGTTCAGGAGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: RPFNVFLKSTCRTNPMHADCNSP*VFRSVS
Trigger: AGACACACTCCTGAACACGCACGGGCTGTTGCAGTC...CGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTGACTGCAACAGCCCGTaGGTGTTCAGGAGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: PVEQILCMRMTMNSSSHIDCNSP*VFRSVS
Trigger: AGACACACTCCTGAACACGCACGGGCTGTTGCAGTC...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTCTCATTGGAGGTGTCTaGATGTACGAGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: TWESDVRTRIHFTCLLLCLIGGV*MYECVW
Trigger: CCACACACACTCGTACATGCAGACACCTCCAATGAG...ACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTAAAGTCGTCGAGCTTTaGTATCATGCGGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: TWESDVRTRIHFTCLLLCKVVEL*YHAAAP
Trigger: AGGTGCTGCCGCATGATAGCAAAGCTCGACGACTTT...ACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CATTTTACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACAGGCTGCAGCCTCCTTaGCTCCAGGGTCAAAATCTT +
Preference number: 4 (lower is better)
Translates to: HFTCLLLCSFMSRARLRNRLQPP*LQGQNL
Trigger: AAGATTTTGACCCTGGAGTCAAGGAGGCTGCAGCCT...GTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTAGGCTGCAGCCTCCTTaGCTCCAGGGTCAAAATCTT +
Preference number: 4 (lower is better)
Translates to: PVEQILCMRMTMNSSSHIRLQPP*LQGQNL
Trigger: AAGATTTTGACCCTGGAGTCAAGGAGGCTGCAGCCT...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATGCTTTGCAATATCACTaGGGGCCGAAGCAGCAATCC +
Preference number: 4 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNALQYH*GPKQQS
Trigger: GGATTGCTGCTTCGGCCCTCAGTGATATTGCAAAGC...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CATTTTACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCATAACCAAGCATCATaGTGCCAGGCAGCCGTGTGT +
Preference number: 4 (lower is better)
Translates to: HFTCLLLCSFMSRARLRNHNQAS*CQAAVC
Trigger: ACACACGGCTGCCTGGCATCATGATGCTTGGTTATG...GTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGACATAACCAAGCATCATaGTGCCAGGCAGCCGTGTGT +
Preference number: 4 (lower is better)
Translates to: LLLCSFMSRARLRNLSMRHNQAS*CQAAVC
Trigger: ACACACGGCTGCCTGGCATCATGATGCTTGGTTATG...TCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp ACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTGCTGCAGCCTTAATATaGTCTTCCGGTTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: TWESDVRTRIHFTCLLLCAAALI*SSGSSD
Trigger: GTCAGAAGAACCGGAAGATCATATTAAGGCTGCAGC...ACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTGCTGCAGCCTTAATATaGTCTTCCGGTTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: LGKVTLGQGSILHACFFVAAALI*SSGSSD
Trigger: GTCAGAAGAACCGGAAGATCATATTAAGGCTGCAGC...AACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATCCCTCGCTGGGCCCATaGAAGGTAAGGAACACTTTA +
Preference number: 4 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNPSLGP*KVRNTL
Trigger: TAAAGTGTTCCTTACCTTTCATGGGCCCAGCGAGGG...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp GAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTCCCTCGCTGGGCCCATaGAAGGTAAGGAACACTTTA +
Preference number: 4 (lower is better)
Translates to: EQILCMRMTMNSSSHIQAPSLGP*KVRNTL
Trigger: TAAAGTGTTCCTTACCTTTCATGGGCCCAGCGAGGG...AGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CATTTTACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACGCGGCAGCACCTTACTaGACTGTCCAACCACATGTT +
Preference number: 4 (lower is better)
Translates to: HFTCLLLCSFMSRARLRNAAAPY*TVQPHV
Trigger: AACATGTGGTTGGACAGTTCAGTAAGGTGCTGCCGC...GTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp AGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATTTGACCAGCGTATCCAGTaGTCCACAATCGACTATTGC +
Preference number: 4 (lower is better)
Translates to: SLLQVPCISVISFLLQRFDQRIQ*STIDYC
Trigger: GCAATAGTCGATTGTGGAGCACTGGATACGCTGGTC...AAATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTTGCAATATATCTAAGTaGCCAGGCTGCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LGKVTLGQGSILHACFFVCNISK*PGCSLL
Trigger: AAGGAGGCTGCAGCCTGGGCACTTAGATATATTGCA...AACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATGCCGTGTGTTCCCTTTaGAGGACCCAATGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNAVCSL*RTQCSQ
Trigger: TTGACTGCATTGGGTCCTGCAAAGGGAACACACGGC...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CATTTTACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACGCCGTGTGTTCCCTTTaGAGGACCCAATGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: HFTCLLLCSFMSRARLRNAVCSL*RTQCSQ
Trigger: TTGACTGCATTGGGTCCTGCAAAGGGAACACACGGC...GTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp AGCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCGAGGGAGAGCATGTATaGAGGAGTATAACTCTCTAT +
Preference number: 4 (lower is better)
Translates to: SIRVSFKCPVYLSSVSSFEGEHV*RSITLY
Trigger: ATAGAGAGTTATACTCCTGCATACATGCTCTCCCTC...GAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAGAGGGAGAGCATGTATaGAGGAGTATAACTCTCTAT +
Preference number: 4 (lower is better)
Translates to: ASESPSSALYICHQFPPSEGEHV*RSITLY
Trigger: ATAGAGAGTTATACTCCTGCATACATGCTCTCCCTC...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCACGAGCTTTGCTATCATaGGGCAGCACCTTACTGAAC +
Preference number: 4 (lower is better)
Translates to: TCLLLCSFMSRARLRNLSRALLS*GSTLLN
Trigger: GTTCAGTAAGGTGCTGCCGCATGATAGCAAAGCTCG...TGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp GAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTTGGGTCCTGGCCTTCTaGTATTGCTCGAACACTTGC +
Preference number: 4 (lower is better)
Translates to: EQILCMRMTMNSSSHIQAWVLAF*YCSNTC
Trigger: GCAAGTGTTCGAGCAATACCAGAAGGCCAGGACCCA...AGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313311.10
ENST00000376624.8
CDS-3UTR CCA 90 bp GTTGATAGCTGTCCACCCTCTGCAGAAGTGTATCTGAATATCCAGGGGAATAATAGTCTGTTGAATTGTTaGGACCACGTCCAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VDSCPPSAEVYLNIQGNNSLLNC*DHVQKK
Trigger: CTTCTTCTGGACGTGGTCCCAACAATTCAACAGACT...ATTATTCCCCTGGATATTCAGATACACTTCTGCAGAGGGTGGACAGCTATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS-3UTR TCA 90 bp CATTTTACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACAAAGCAGCAGTCTGTTaGATTGTTGGGACCACGTCC +
Preference number: 4 (lower is better)
Translates to: HFTCLLLCSFMSRARLRNKAAVC*IVGTTS
Trigger: GGACGTGGTCCCAACAATTCAACAGACTGCTGCTTT...GTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGACAATCGACTATTGCCTaGGCTAGCTGGGGAGAATGT +
Preference number: 4 (lower is better)
Translates to: LLLCSFMSRARLRNLSMRQSTIA*ASWGEC
Trigger: ACATTCTCCCCAGCTAGCTCAGGCAATAGTCGATTG...TCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp AGGCCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGCAATCGACTATTGCCTaGGCTAGCTGGGGAGAATGT +
Preference number: 4 (lower is better)
Translates to: RPFNVFLKSTCRTNPMHAQSTIA*ASWGEC
Trigger: ACATTCTCCCCAGCTAGCTCAGGCAATAGTCGATTG...CGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTATCCACCACAGCTTGTaGCAGTTCTGCATTATGTCT +
Preference number: 4 (lower is better)
Translates to: LGKVTLGQGSILHACFFVIHHSL*QFCIMS
Trigger: AGACATAATGCAGAACTGTCACAAGCTGTGGTGGAT...AACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp AGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATATCCACCACAGCTTGTaGCAGTTCTGCATTATGTCT +
Preference number: 4 (lower is better)
Translates to: RVSFKCPVYLSSVSSFKDIHHSL*QFCIMS
Trigger: AGACATAATGCAGAACTGTCACAAGCTGTGGTGGAT...ATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp TGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAGGGAGAGCAATCCACCACAGCTTGTaGCAGTTCTGCATTATGTCT +
Preference number: 4 (lower is better)
Translates to: CSFMSRARLRNLSMRGRAIHHSL*QFCIMS
Trigger: AGACATAATGCAGAACTGTCACAAGCTGTGGTGGAT...TGCTCTCCCTCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAATCATCTGGGCTAAATaGGCAACAGCTCCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LLLCSFMSRARLRNLSMRIIWAK*ATAPAS
Trigger: GGATGCAGGAGCTGTTGCTCATTTAGCCCAGATGAT...TCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp AGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATAACCTGACTGAGAGCTaGAAGGATCTGATGCTTCAA +
Preference number: 4 (lower is better)
Translates to: RVSFKCPVYLSSVSSFKDNLTES*KDLMLQ
Trigger: TTGAAGCATCAGATCCTTTCAGCTCTCAGTCAGGTT...ATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTGACCAGCGTATCCAGTaGTCCACAATCGACTATTGC +
Preference number: 4 (lower is better)
Translates to: PVEQILCMRMTMNSSSHIDQRIQ*STIDYC
Trigger: GCAATAGTCGATTGTGGAGCACTGGATACGCTGGTC...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATCTTTGCAGGACCCAATaGAGTCAATCACGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNLCRTQ*SQSRQQ
Trigger: TTGCTGCCGTGATTGACTGCATTGGGTCCTGCAAAG...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAGTTCTCAGAATGAGCTaGTACATAACCAAGCATCAT +
Preference number: 4 (lower is better)
Translates to: ASESPSSALYICHQFPPSVLRMS*YITKHH
Trigger: ATGATGCTTGGTTATGTAGCAGCTCATTCTGAGAAC...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGACTCATTGGAGGTGTCTaGATGTACGAGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LLLCSFMSRARLRNLSMRLIGGV*MYECVW
Trigger: CCACACACACTCGTACATGCAGACACCTCCAATGAG...TCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCGAGCTTTGCTATCATaGGGCAGCACCTTACTGAAC +
Preference number: 4 (lower is better)
Translates to: PVEQILCMRMTMNSSSHIRALLS*GSTLLN
Trigger: GTTCAGTAAGGTGCTGCCGCATGATAGCAAAGCTCG...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATCGAGCTTTGCTATCATaGGGCAGCACCTTACTGAAC +
Preference number: 4 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNRALLS*GSTLLN
Trigger: GTTCAGTAAGGTGCTGCCGCATGATAGCAAAGCTCG...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATAAAGTCGTCGAGCTTTaGTATCATGCGGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNKVVEL*YHAAAP
Trigger: AGGTGCTGCCGCATGATAGCAAAGCTCGACGACTTT...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp CCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGCACGAACTGGGTCCTaGCCTTCTGGTATTGCTCGA +
Preference number: 4 (lower is better)
Translates to: PFNVFLKSTCRTNPMHANARTGS*PSGIAR
Trigger: TCGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGC...ATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR CCA 90 bp CCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATAGCGTCTCGATGTTTTaGGGTCTAGTCGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PFNVFLKSTCRTNPMHANSVSMF*GLVASS
Trigger: GGAGCTGGCGACTAGACCCCAAAACATCGAGACGCT...ATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR CCA 90 bp AGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATAGTCTGTTGAATTGTTaGGACCACGTCCAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RVSFKCPVYLSSVSSFKDSLLNC*DHVQKK
Trigger: CTTCTTCTGGACGTGGTCCCAACAATTCAACAGACT...ATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp AGCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCGCAATTTCTGGCTCCTaGATACAGAGTACTAAAAGA +
Preference number: 4 (lower is better)
Translates to: SIRVSFKCPVYLSSVSSFAISGS*IQSTKR
Trigger: TCTTTTAGTACTCTGTATCCAGGAGCCAGAAATTGC...GAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCATTTCAAAGCAATTTCTaGCTCCTGGATACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: ASESPSSALYICHQFPPSFQSNF*LLDTEY
Trigger: GTACTCTGTATCCAGGAGCCAGAAATTGCTTTGAAA...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp GAAACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTAAGCAGACTGACAACTaGGGTACACCCTTAGAAATG +
Preference number: 4 (lower is better)
Translates to: ETWESDVRTRIHFTCLLLKQTDN*GTPLEM
Trigger: CATTTCTAAGGGTGTACCCCAGTTGTCAGTCTGCTT...AAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAGTGACTTTTGAAACTTaGGAAAGTGACGTTAGGACA +
Preference number: 4 (lower is better)
Translates to: ASESPSSALYICHQFPPSVTFET*ESDVRT
Trigger: TGTCCTAACGTCACTTTCCCAAGTTTCAAAAGTCAC...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp AACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATTGGGTCCTGGCCTTCTaGTATTGCTCGAACACTGCG +
Preference number: 4 (lower is better)
Translates to: NVFLKSTCRTNPMHANDHWVLAF*YCSNTA
Trigger: CGCAGTGTTCGAGCAATACCAGAAGGCCAGGACCCA...ATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS-3UTR TCA 90 bp GTTGATAGCTGTCCACCCTCTGCAGAAGTGTATCTGAATATCCAGGGGAATAATATTCTGTTCTGCCAATaGATAAACAAGCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: VDSCPPSAEVYLNIQGNNILFCQ*INKLWK
Trigger: CTTCCACAGCTTGTTTATTCATTGGCAGAACAGAAT...ATTATTCCCCTGGATATTCAGATACACTTCTGCAGAGGGTGGACAGCTATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS-3UTR TCA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTAATCTTCCAAGCATATaGCCAGCGTATCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: PVEQILCMRMTMNSSSHINLPSI*PAYPVL
Trigger: GAGCACTGGATACGCTGGTCATATGCTTGGAAGATT...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATAATCTTCCAAGCATATaGCCAGCGTATCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNNLPSI*PAYPVL
Trigger: GAGCACTGGATACGCTGGTCATATGCTTGGAAGATT...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CATTTTACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACAATCTTCCAAGCATATaGCCAGCGTATCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: HFTCLLLCSFMSRARLRNNLPSI*PAYPVL
Trigger: GAGCACTGGATACGCTGGTCATATGCTTGGAAGATT...GTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATCATAACCAAGCATCATaGTGCCAGGCAGCCGTGTGT +
Preference number: 4 (lower is better)
Translates to: PFNVFLKSTCRTNPMHANHNQAS*CQAAVC
Trigger: ACACACGGCTGCCTGGCATCATGATGCTTGGTTATG...ATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATGCTGCAGCCTTAATATaGTCTTCCGGTTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNAAALI*SSGSSD
Trigger: GTCAGAAGAACCGGAAGATCATATTAAGGCTGCAGC...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp GTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATGAACTGGCAAAGTATTTGTaGCTGCAACAGCCCGTGCGT +
Preference number: 4 (lower is better)
Translates to: VFLKSTCRTNPMHANDHELAKYL*LQQPVR
Trigger: ACGCACGGGCTGTTGCAGTCACAAATACTTTGCCAG...TTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp AACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATCCCTCGCTGGGCCCATaGAAGGTAAGGAACACTTTA +
Preference number: 4 (lower is better)
Translates to: NVFLKSTCRTNPMHANDHPSLGP*KVRNTL
Trigger: TAAAGTGTTCCTTACCTTTCATGGGCCCAGCGAGGG...ATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATCCCTCGCTGGGCCCATaGAAGGTAAGGAACACTTTA +
Preference number: 4 (lower is better)
Translates to: PFNVFLKSTCRTNPMHANPSLGP*KVRNTL
Trigger: TAAAGTGTTCCTTACCTTTCATGGGCCCAGCGAGGG...ATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp ACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTCTGTTGATGTATTCTTaGAGGAGAGAACCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: TWESDVRTRIHFTCLLLCLLMYS*RREPGS
Trigger: AGAACCTGGTTCTCTCCTTCAAGAATACATCAACAG...ACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATTGCAATATATCTAAGTaGCCAGGCTGCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNCNISK*PGCSLL
Trigger: AAGGAGGCTGCAGCCTGGGCACTTAGATATATTGCA...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp GAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTTGCAATATATCTAAGTaGCCAGGCTGCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: EQILCMRMTMNSSSHIQACNISK*PGCSLL
Trigger: AAGGAGGCTGCAGCCTGGGCACTTAGATATATTGCA...AGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCTCTGGAGAATGCTTTaGAATATCACTGAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: PVEQILCMRMTMNSSSHILWRML*NITEGR
Trigger: TCGGCCCTCAGTGATATTGCAAAGCATTCTCCAGAG...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp AGGCCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGCTCTGGAGAATGCTTTaGAATATCACTGAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: RPFNVFLKSTCRTNPMHALWRML*NITEGR
Trigger: TCGGCCCTCAGTGATATTGCAAAGCATTCTCCAGAG...CGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATCTCTGGAGAATGCTTTaGAATATCACTGAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNLWRML*NITEGR
Trigger: TCGGCCCTCAGTGATATTGCAAAGCATTCTCCAGAG...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp GTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATGAAGCCGTGTGTTCCCTTTaGAGGACCCAATGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: VFLKSTCRTNPMHANDHEAVCSL*RTQCSQ
Trigger: TTGACTGCATTGGGTCCTGCAAAGGGAACACACGGC...TTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAAGTATTTGTGACTaGAACAGCCCGTGCGTGTTC +
Preference number: 4 (lower is better)
Translates to: PVEQILCMRMTMNSSSHIQSICD*NSPCVF
Trigger: GAACACGCACGGGCTGTTGCAGTCACAAATACTTTG...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGACAAAGTATTTGTGACTaGAACAGCCCGTGCGTGTTC +
Preference number: 4 (lower is better)
Translates to: LLLCSFMSRARLRNLSMRQSICD*NSPCVF
Trigger: GAACACGCACGGGCTGTTGCAGTCACAAATACTTTG...TCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp AACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATTGGGTCCTGGCCTTCTaGTATTGCTCGAACACTTGC +
Preference number: 4 (lower is better)
Translates to: NVFLKSTCRTNPMHANDHWVLAF*YCSNTC
Trigger: GCAAGTGTTCGAGCAATACCAGAAGGCCAGGACCCA...ATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313311.10
ENST00000376624.8
CDS-3UTR CCA 90 bp ACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAAGTCTGTTGAATTGTTaGGACCACGTCCAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: TCLLLCSFMSRARLRNLSSLLNC*DHVQKK
Trigger: CTTCTTCTGGACGTGGTCCCAACAATTCAACAGACT...TGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp AGCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCACAGGTAAGTACAACTaGAAAAATCTCTGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: SIRVSFKCPVYLSSVSSFTGKYN*KNLCFN
Trigger: GTTGAAGCAGAGATTTTTCCAGTTGTACTTACCTGT...GAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp TGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAGGGAGAGCAGTGGGGAAGGAGGTTTaGAAAACTTGTGATAAAGAG +
Preference number: 4 (lower is better)
Translates to: CSFMSRARLRNLSMRGRAVGKEV*KTCDKE
Trigger: CTCTTTATCACAAGTTTTCCAAACCTCCTTCCCCAC...TGCTCTCCCTCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp AGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATATTCTGTTCTGCCAATaGATAAACAAGCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RVSFKCPVYLSSVSSFKDILFCQ*INKLWK
Trigger: CTTCCACAGCTTGTTTATTCATTGGCAGAACAGAAT...ATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATCAATCGACTATTGCCTaGGCTAGCTGGGGAGAATGT +
Preference number: 4 (lower is better)
Translates to: PFNVFLKSTCRTNPMHANQSTIA*ASWGEC
Trigger: ACATTCTCCCCAGCTAGCTCAGGCAATAGTCGATTG...ATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp AACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATATCATCTGGGCTAAATaGGCAACAGCTCCTGCATCC +
Preference number: 4 (lower is better)
Translates to: NVFLKSTCRTNPMHANDHIIWAK*ATAPAS
Trigger: GGATGCAGGAGCTGTTGCTCATTTAGCCCAGATGAT...ATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATATCATCTGGGCTAAATaGGCAACAGCTCCTGCATCC +
Preference number: 4 (lower is better)
Translates to: PFNVFLKSTCRTNPMHANIIWAK*ATAPAS
Trigger: GGATGCAGGAGCTGTTGCTCATTTAGCCCAGATGAT...ATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp GAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTAACCTGACTGAGAGCTaGAAGGATCTGATGCTTCAA +
Preference number: 4 (lower is better)
Translates to: EQILCMRMTMNSSSHIQANLTES*KDLMLQ
Trigger: TTGAAGCATCAGATCCTTTCAGCTCTCAGTCAGGTT...AGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTAACCTGACTGAGAGCTaGAAGGATCTGATGCTTCAA +
Preference number: 4 (lower is better)
Translates to: PVEQILCMRMTMNSSSHINLTES*KDLMLQ
Trigger: TTGAAGCATCAGATCCTTTCAGCTCTCAGTCAGGTT...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp GAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTTATAACTCTCTATTCTaGATTCTACCCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: EQILCMRMTMNSSSHIQAYNSLF*ILPSLG
Trigger: GCCCAGCGAGGGTAGAATTCAGAATAGAGAGTTATA...AGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp GTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATGAAATTACACCCGCGTTCTaGAGCGTCTCGATGTTTTGG +
Preference number: 4 (lower is better)
Translates to: VFLKSTCRTNPMHANDHEITPAF*SVSMFW
Trigger: CCAAAACATCGAGACGCTGCAGAACGCGGGTGTAAT...TTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS-3UTR GCA 90 bp GAAACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTTCAACAACCATTTCTaGCAGATCCACGGAATGTTT +
Preference number: 4 (lower is better)
Translates to: ETWESDVRTRIHFTCLLLFNNHF*QIHGMF
Trigger: AAACATTCCGTGGATCTGGCAGAAATGGTTGTTGAA...AAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTTCAACAACCATTTCTaGCAGATCCACGGAATGTTT +
Preference number: 4 (lower is better)
Translates to: TWESDVRTRIHFTCLLLCFNNHF*QIHGMF
Trigger: AAACATTCCGTGGATCTGGCAGAAATGGTTGTTGAA...ACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp TGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAGGGAGAGCAGTTCTCAGAATGAGCTaGTACATAACCAAGCATCAT +
Preference number: 4 (lower is better)
Translates to: CSFMSRARLRNLSMRGRAVLRMS*YITKHH
Trigger: ATGATGCTTGGTTATGTAGCAGCTCATTCTGAGAAC...TGCTCTCCCTCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTGTTCTCAGAATGAGCTaGTACATAACCAAGCATCAT +
Preference number: 4 (lower is better)
Translates to: LGKVTLGQGSILHACFFVVLRMS*YITKHH
Trigger: ATGATGCTTGGTTATGTAGCAGCTCATTCTGAGAAC...AACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATCTCATTGGAGGTGTCTaGATGTACGAGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PFNVFLKSTCRTNPMHANLIGGV*MYECVW
Trigger: CCACACACACTCGTACATGCAGACACCTCCAATGAG...ATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAAGAGTCTCCTTCAAGTaGCCTGTATATCTGTCATCA +
Preference number: 4 (lower is better)
Translates to: TCLLLCSFMSRARLRNLSRVSFK*PVYLSS
Trigger: TGATGACAGATATACAGGGCACTTGAAGGAGACTCT...TGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp AGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATTTGAGGGAGAGCATGTATaGAGGAGTATAACTCTCTAT +
Preference number: 4 (lower is better)
Translates to: SLLQVPCISVISFLLQRFEGEHV*RSITLY
Trigger: ATAGAGAGTTATACTCCTGCATACATGCTCTCCCTC...AAATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCACAAAGACATTACACCTaGCTGTCCATTAGGTATCCA +
Preference number: 4 (lower is better)
Translates to: TCLLLCSFMSRARLRNLSQRHYT*LSIRYP
Trigger: TGGATACCTAATGGACAGGCAGGTGTAATGTCTTTG...TGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538630.2
CDS-3UTR CCA 90 bp CTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAGGTCATCATTATAATTaGCCAGTCTCCCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LLLCSFMSRARLRNLSMRGHHYN*PVSQEP
Trigger: TGGCTCTTGGGAGACTGGCCAATTATAATGATGACC...TCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp GAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTGGTCATCATTATAATTaGCCAGTCTCCCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: EQILCMRMTMNSSSHIQAGHHYN*PVSQEP
Trigger: TGGCTCTTGGGAGACTGGCCAATTATAATGATGACC...AGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp ACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTTTCAAAGCAATTTCTaGCTCCTGGATACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: TWESDVRTRIHFTCLLLCFQSNF*LLDTEY
Trigger: GTACTCTGTATCCAGGAGCCAGAAATTGCTTTGAAA...ACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp CTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAAAGCAGACTGACAACTaGGGTACACCCTTAGAAATG +
Preference number: 4 (lower is better)
Translates to: LLLCSFMSRARLRNLSMRKQTDN*GTPLEM
Trigger: CATTTCTAAGGGTGTACCCCAGTTGTCAGTCTGCTT...TCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp AGCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCCATGTTTCAGAATATTaGGAGGAGCATCATATAGAA +
Preference number: 4 (lower is better)
Translates to: SIRVSFKCPVYLSSVSSFHVSEY*EEHHIE
Trigger: TTCTATATGATGCTCCTCCCAATATTCTGAAACATG...GAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp ACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAGTGGGGAAGGAGGTTTaGAAAACTTGTGATAAAGAG +
Preference number: 4 (lower is better)
Translates to: TCLLLCSFMSRARLRNLSVGKEV*KTCDKE
Trigger: CTCTTTATCACAAGTTTTCCAAACCTCCTTCCCCAC...TGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp CTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTGTGACTTTTGAAACTTaGGAAAGTGACGTTAGGACA +
Preference number: 4 (lower is better)
Translates to: LGKVTLGQGSILHACFFVVTFET*ESDVRT
Trigger: TGTCCTAACGTCACTTTCCCAAGTTTCAAAAGTCAC...AACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATAATCTTCCAAGCATATaGCCAGCGTATCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: PFNVFLKSTCRTNPMHANNLPSI*PAYPVL
Trigger: GAGCACTGGATACGCTGGTCATATGCTTGGAAGATT...ATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp GTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATGAACTCTGGAGAATGCTTTaGAATATCACTGAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: VFLKSTCRTNPMHANDHELWRML*NITEGR
Trigger: TCGGCCCTCAGTGATATTGCAAAGCATTCTCCAGAG...TTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp AGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATTTGTTCTCAGAATGAGCTaGTACATAACCAAGCATCAT +
Preference number: 4 (lower is better)
Translates to: SLLQVPCISVISFLLQRFVLRMS*YITKHH
Trigger: ATGATGCTTGGTTATGTAGCAGCTCATTCTGAGAAC...AAATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATCAAAGTATTTGTGACTaGAACAGCCCGTGCGTGTTC +
Preference number: 4 (lower is better)
Translates to: PFNVFLKSTCRTNPMHANQSICD*NSPCVF
Trigger: GAACACGCACGGGCTGTTGCAGTCACAAATACTTTG...ATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp AGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATGTAGAACAAATCCTATaGATGCGAATGACCATGAAT +
Preference number: 4 (lower is better)
Translates to: RVSFKCPVYLSSVSSFKDVEQIL*MRMTMN
Trigger: ATTCATGGTCATTCGCATGCATAGGATTTGTTCTAC...ATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAAGAGTCTCCTTCAAGTaGCCTGTATATCTGTCATCA +
Preference number: 4 (lower is better)
Translates to: LLLCSFMSRARLRNLSMRRVSFK*PVYLSS
Trigger: TGATGACAGATATACAGGGCACTTGAAGGAGACTCT...TCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTAGAGTCTCCTTCAAGTaGCCTGTATATCTGTCATCA +
Preference number: 4 (lower is better)
Translates to: PVEQILCMRMTMNSSSHIRVSFK*PVYLSS
Trigger: TGATGACAGATATACAGGGCACTTGAAGGAGACTCT...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp TGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAGGGAGAGCAAAACTTCCTAAAAAGTaGACAAACTTGCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: CSFMSRARLRNLSMRGRAKLPKK*TNLQLW
Trigger: CCAGAGTTGCAAGTTTGTGCACTTTTTAGGAAGTTT...TGCTCTCCCTCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS-3UTR CCA 90 bp AGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATTTAACTATATCTCATTaGAGGTGTCTGCATGTACGA +
Preference number: 4 (lower is better)
Translates to: RVSFKCPVYLSSVSSFKDLTISH*RCLHVR
Trigger: TCGTACATGCAGACACCTCCAATGAGATATAGTTAA...ATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATGTGGGGAAGGAGGTTTaGAAAACTTGTGATAAAGAG +
Preference number: 4 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNVGKEV*KTCDKE
Trigger: CTCTTTATCACAAGTTTTCCAAACCTCCTTCCCCAC...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp GAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTATTCTGTTCTGCCAATaGATAAACAAGCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: EQILCMRMTMNSSSHIQAILFCQ*INKLWK
Trigger: CTTCCACAGCTTGTTTATTCATTGGCAGAACAGAAT...AGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp AGGCCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGATTCTGTTCTGCCAATaGATAAACAAGCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RPFNVFLKSTCRTNPMHAILFCQ*INKLWK
Trigger: CTTCCACAGCTTGTTTATTCATTGGCAGAACAGAAT...CGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp AACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATAACCTGACTGAGAGCTaGAAGGATCTGATGCTTCAA +
Preference number: 4 (lower is better)
Translates to: NVFLKSTCRTNPMHANDHNLTES*KDLMLQ
Trigger: TTGAAGCATCAGATCCTTTCAGCTCTCAGTCAGGTT...ATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp CTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAGGAATAATACCTTACTaGACTGTCCAACCACATGTT +
Preference number: 4 (lower is better)
Translates to: LLLCSFMSRARLRNLSMRGIIPY*TVQPHV
Trigger: AACATGTGGTTGGACAGTTCAGTAAGGTATTATTCC...TCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313311.10
CDS-3UTR TCA 90 bp CCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATTATAACTCTCTATTCTaGATTCTACCCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PFNVFLKSTCRTNPMHANYNSLF*ILPSLG
Trigger: GCCCAGCGAGGGTAGAATTCAGAATAGAGAGTTATA...ATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CATTTTACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACTTCAACAACCATTTCTaGCAGATCCACGGAATGTTT +
Preference number: 4 (lower is better)
Translates to: HFTCLLLCSFMSRARLRNFNNHF*QIHGMF
Trigger: AAACATTCCGTGGATCTGGCAGAAATGGTTGTTGAA...GTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGTAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTTTCAACAACCATTTCTaGCAGATCCACGGAATGTTT +
Preference number: 4 (lower is better)
Translates to: PVEQILCMRMTMNSSSHIFNNHF*QIHGMF
Trigger: AAACATTCCGTGGATCTGGCAGAAATGGTTGTTGAA...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAGTAGAACAAATCCTATaGATGCGAATGACCATGAAT +
Preference number: 4 (lower is better)
Translates to: TCLLLCSFMSRARLRNLSVEQIL*MRMTMN
Trigger: ATTCATGGTCATTCGCATGCATAGGATTTGTTCTAC...TGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp CCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATAGTCTGTTGAATTGTTaGGACCACGTCCAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PFNVFLKSTCRTNPMHANSLLNC*DHVQKK
Trigger: CTTCTTCTGGACGTGGTCCCAACAATTCAACAGACT...ATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp AACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATGGTCATCATTATAATTaGCCAGTCTCCCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: NVFLKSTCRTNPMHANDHGHHYN*PVSQEP
Trigger: TGGCTCTTGGGAGACTGGCCAATTATAATGATGACC...ATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp GTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATGAAGGTCATCATTATAATTaGCCAGTCTCCCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: VFLKSTCRTNPMHANDHEGHHYN*PVSQEP
Trigger: TGGCTCTTGGGAGACTGGCCAATTATAATGATGACC...TTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTGCAATTTCTGGCTCCTaGATACAGAGTACTAAAAGA +
Preference number: 4 (lower is better)
Translates to: PVEQILCMRMTMNSSSHIAISGS*IQSTKR
Trigger: TCTTTTAGTACTCTGTATCCAGGAGCCAGAAATTGC...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp AGGCCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGGCAATTTCTGGCTCCTaGATACAGAGTACTAAAAGA +
Preference number: 4 (lower is better)
Translates to: RPFNVFLKSTCRTNPMHAAISGS*IQSTKR
Trigger: TCTTTTAGTACTCTGTATCCAGGAGCCAGAAATTGC...CGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp CTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGATTTCAAAGCAATTTCTaGCTCCTGGATACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: LLLCSFMSRARLRNLSMRFQSNF*LLDTEY
Trigger: GTACTCTGTATCCAGGAGCCAGAAATTGCTTTGAAA...TCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp AGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATTTACAGGTAAGTACAACTaGAAAAATCTCTGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: SLLQVPCISVISFLLQRFTGKYN*KNLCFN
Trigger: GTTGAAGCAGAGATTTTTCCAGTTGTACTTACCTGT...AAATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp CCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATAAGCAGACTGACAACTaGGGTACACCCTTAGAAATG +
Preference number: 4 (lower is better)
Translates to: PFNVFLKSTCRTNPMHANKQTDN*GTPLEM
Trigger: CATTTCTAAGGGTGTACCCCAGTTGTCAGTCTGCTT...ATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp AGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATTTTTAACTATATCTCATTaGAGGTGTCTGCATGTACGA +
Preference number: 4 (lower is better)
Translates to: SLLQVPCISVISFLLQRFLTISH*RCLHVR
Trigger: TCGTACATGCAGACACCTCCAATGAGATATAGTTAA...AAATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp CTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAGTGACTTTTGAAACTTaGGAAAGTGACGTTAGGACA +
Preference number: 4 (lower is better)
Translates to: LLLCSFMSRARLRNLSMRVTFET*ESDVRT
Trigger: TGTCCTAACGTCACTTTCCCAAGTTTCAAAAGTCAC...TCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR TCA 90 bp GTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATGAACTGTTGATGTATTCTTaGAGGAGAGAACCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: VFLKSTCRTNPMHANDHELLMYS*RREPGS
Trigger: AGAACCTGGTTCTCTCCTTCAAGAATACATCAACAG...TTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATAACTGGAAAAATCTCTaGTTCAACAACCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNNWKNL*FNNHFC
Trigger: GCAGAAATGGTTGTTGAAGCAGAGATTTTTCCAGTT...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTAACTGGAAAAATCTCTaGTTCAACAACCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: PVEQILCMRMTMNSSSHINWKNL*FNNHFC
Trigger: GCAGAAATGGTTGTTGAAGCAGAGATTTTTCCAGTT...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR GCA 90 bp CCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATAGAGTCTCCTTCAAGTaGCCTGTATATCTGTCATCA +
Preference number: 4 (lower is better)
Translates to: PFNVFLKSTCRTNPMHANRVSFK*PVYLSS
Trigger: TGATGACAGATATACAGGGCACTTGAAGGAGACTCT...ATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTACAGGTAAGTACAACTaGAAAAATCTCTGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: PVEQILCMRMTMNSSSHITGKYN*KNLCFN
Trigger: GTTGAAGCAGAGATTTTTCCAGTTGTACTTACCTGT...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp CTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAACAGGTAAGTACAACTaGAAAAATCTCTGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: LLLCSFMSRARLRNLSMRTGKYN*KNLCFN
Trigger: GTTGAAGCAGAGATTTTTCCAGTTGTACTTACCTGT...TCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp AGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATTTCATGTTTCAGAATATTaGGAGGAGCATCATATAGAA +
Preference number: 4 (lower is better)
Translates to: SLLQVPCISVISFLLQRFHVSEY*EEHHIE
Trigger: TTCTATATGATGCTCCTCCCAATATTCTGAAACATG...AAATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTTTAACTATATCTCATTaGAGGTGTCTGCATGTACGA +
Preference number: 4 (lower is better)
Translates to: PVEQILCMRMTMNSSSHILTISH*RCLHVR
Trigger: TCGTACATGCAGACACCTCCAATGAGATATAGTTAA...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp AACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATGTGGGGAAGGAGGTTTaGAAAACTTGTGATAAAGAG +
Preference number: 4 (lower is better)
Translates to: NVFLKSTCRTNPMHANDHVGKEV*KTCDKE
Trigger: CTCTTTATCACAAGTTTTCCAAACCTCCTTCCCCAC...ATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp CCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGCAATTTCTGGCTCCTaGATACAGAGTACTAAAAGA +
Preference number: 4 (lower is better)
Translates to: PFNVFLKSTCRTNPMHANAISGS*IQSTKR
Trigger: TCTTTTAGTACTCTGTATCCAGGAGCCAGAAATTGC...ATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp GTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATTTCAAAGCAATTTCTaGCTCCTGGATACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: VFLKSTCRTNPMHANDHEFQSNF*LLDTEY
Trigger: GTACTCTGTATCCAGGAGCCAGAAATTGCTTTGAAA...TTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp CATTTTACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCATGTTTCAGAATATTaGGAGGAGCATCATATAGAA +
Preference number: 4 (lower is better)
Translates to: HFTCLLLCSFMSRARLRNHVSEY*EEHHIE
Trigger: TTCTATATGATGCTCCTCCCAATATTCTGAAACATG...GTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGTAAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CCA 90 bp AGGCCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGCTATTGGAACTCTTTTaGTCAAGGAGTTCTCATAAA +
Preference number: 4 (lower is better)
Translates to: RPFNVFLKSTCRTNPMHALLELF*SRSSHK
Trigger: TTTATGAGAACTCCTTGACCAAAAGAGTTCCAATAG...CGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS-3UTR GCA 90 bp GTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATGAAAACTGGAAAAATCTCTaGTTCAACAACCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: VFLKSTCRTNPMHANDHENWKNL*FNNHFC
Trigger: GCAGAAATGGTTGTTGAAGCAGAGATTTTTCCAGTT...TTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS CCA 90 bp TGCGGGGAAGCCGCTCGGCCTGCGAGTCCACCAAGGGGGCGATCGTaGCGACGACTCGGCCTCCGACGGGAGCCGCTTCTCTGTGTACCC +
Preference number: 5 (lower is better)
Translates to: CGEAARPASPPRGRS*RRLGLRREPLLCVP
Trigger: GGGTACACAGAGAAGCGGCTCCCGTCGGAGGCCGAGTCGTCGCCACGATCGCCCCCTTGGTGGACTCGCAGGCCGAGCGGCTTCCCCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376603.6
ENST00000456231.6
ENST00000488555.5
CDS CCA 90 bp GTTCGGGCTCCGGGCTCACCCGCGTTCTGCAGCGTCTCGATGTTTTaGGGTCTAGTCGCCAGCTCCGCCACCATCTGCACGAACTGGGTC +
Preference number: 5 (lower is better)
Translates to: VRAPGSPAFCSVSMF*GLVASSATICTNWV
Trigger: GACCCAGTTCGTGCAGATGGTGGCGGAGCTGGCGACTAGACCCCAAAACATCGAGACGCTGCAGAACGCGGGTGAGCCCGGAGCCCGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435326.5
CDS GCA 90 bp CATCTGCACGAACTGGGTCCTGGCCTTCTGGTATTGCTCGAACACTaGGGGAGAGAGAGTCGGTGGAGCCCACCGCACCCGGGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: HLHELGPGLLVLLEH*GRESRWSPPHPGLL
Trigger: GAGGAGACCCGGGTGCGGTGGGCTCCACCGACTCTCTCTCCCGCAGTGTTCGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGCAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS GCA 90 bp AGCTCCGCCACCATCTGCACGAACTGGGTCCTGGCCTTCTGGTATTaGTCGAACACTGCGGGAGAGAGAGTCGGTGGAGCCCACCGCACC +
Preference number: 5 (lower is better)
Translates to: SSATICTNWVLAFWY*SNTAGERVGGAHRT
Trigger: GGTGCGGTGGGCTCCACCGACTCTCTCTCCCGCAGTGTTCGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGCAGATGGTGGCGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS CCA 90 bp GTCGCCAGCTCCGCCACCATCTGCACGAACTGGGTCCTGGCCTTCTaGTATTGCTCGAACACTGCGGGAGAGAGAGTCGGTGGAGCCCAC +
Preference number: 5 (lower is better)
Translates to: VASSATICTNWVLAF*YCSNTAGERVGGAH
Trigger: GTGGGCTCCACCGACTCTCTCTCCCGCAGTGTTCGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGCAGATGGTGGCGGAGCTGGCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS GCA 90 bp AGCGTCTCGATGTTTTGGGGTCTAGTCGCCAGCTCCGCCACCATCTaGACGAACTGGGTCCTGGCCTTCTGGTATTGCTCGAACACTGCG +
Preference number: 5 (lower is better)
Translates to: SVSMFWGLVASSATI*TNWVLAFWYCSNTA
Trigger: CGCAGTGTTCGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGCAGATGGTGGCGGAGCTGGCGACTAGACCCCAAAACATCGAGACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS GCA 90 bp AGCGTCTCGATGTTTTGGGGTCTAGTCGCCAGCTCCGCCACCATCTaGACGAACTGGGTCCTGGCCTTCTGGTATTGCTCGAACACTTGC +
Preference number: 5 (lower is better)
Translates to: SVSMFWGLVASSATI*TNWVLAFWYCSNTC
Trigger: GCAAGTGTTCGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGCAGATGGTGGCGGAGCTGGCGACTAGACCCCAAAACATCGAGACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313311.10
ENST00000376624.8
ENST00000435326.5
ENST00000456231.6
ENST00000488555.5
CDS CCA 90 bp ATGTTTTGGGGTCTAGTCGCCAGCTCCGCCACCATCTGCACGAACTaGGTCCTGGCCTTCTGGTATTGCTCGAACACTTGCAGCACCTGC +
Preference number: 5 (lower is better)
Translates to: MFWGLVASSATICTN*VLAFWYCSNTCSTC
Trigger: GCAGGTGCTGCAAGTGTTCGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGCAGATGGTGGCGGAGCTGGCGACTAGACCCCAAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313311.10
ENST00000376624.8
ENST00000435326.5
ENST00000456231.6
ENST00000488555.5
CDS CCA 90 bp CTCAGCAAAGACATTACACCCGCGTTCTGCAGCGTCTCGATGTTTTaGGGTCTAGTCGCCAGCTCCGCCACCATCTGCACGAACTGGGTC +
Preference number: 5 (lower is better)
Translates to: LSKDITPAFCSVSMF*GLVASSATICTNWV
Trigger: GACCCAGTTCGTGCAGATGGTGGCGGAGCTGGCGACTAGACCCCAAAACATCGAGACGCTGCAGAACGCGGGTGTAATGTCTTTGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000456231.6
CDS CCA 90 bp ATGTTTTGGGGTCTAGTCGCCAGCTCCGCCACCATCTGCACGAACTaGGTCCTGGCCTTCTGGTATTGCTCGAACACTGCGGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: MFWGLVASSATICTN*VLAFWYCSNTAGER
Trigger: TCTCTCTCCCGCAGTGTTCGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGCAGATGGTGGCGGAGCTGGCGACTAGACCCCAAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS TCA 90 bp CCATTGCTAGGTTCTCAGAATGAGCTGCTACATAACCAAGCATCATaGTGCCAGGCAGCCGTGTGTTCCCTTTGCAGGACCCAATGCAGT +
Preference number: 5 (lower is better)
Translates to: PLLGSQNELLHNQAS*CQAAVCSLCRTQCS
Trigger: ACTGCATTGGGTCCTGCAAAGGGAACACACGGCTGCCTGGCATCATGATGCTTGGTTATGTAGCAGCTCATTCTGAGAACCTAGCAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS CCA 90 bp AAATGTTCCTTCATGACCATAGGAATCAGGCAGGTGCCCATGGCCTaGGAAAGGGGTGCAGAGAGTCATCTGGTTGTGTTTTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: KCSFMTIGIRQVPMA*ERGAESHLVVFFSP
Trigger: TGGAGAGAAAAACACAACCAGATGACTCTCTGCACCCCTTTCCCAGGCCATGGGCACCTGCCTGATTCCTATGGTCATGAAGGAACATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487973.1
CDS-3UTR CAA 90 bp AGCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCCAGGCTGCAGCCTCCTaGACTCCAGGGTCAAAATCT +
Preference number: 5 (lower is better)
Translates to: SIRVSFKCPVYLSSVSSFQAAAS*TPGSKS
Trigger: AGATTTTGACCCTGGAGTCAAGGAGGCTGCAGCCTG...GAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp GAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTCGCCTCGGCCCTACCTaGCAGCACCTGCCTCTGACT +
Preference number: 5 (lower is better)
Translates to: EQILCMRMTMNSSSHIQARLGPT*QHLPLT
Trigger: AGTCAGAGGCAGGTGCTGCAAGGTAGGGCCGAGGCG...AGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS TCA 90 bp TGTCTTCCAATCTGTCCTAAGGCCCAAGCAGCTGCAGCCTTAATATaGTCTTCCGGTTCTTCTGACAAGCAGACTGACAACTGGGGTACA +
Preference number: 5 (lower is better)
Translates to: CLPICPKAQAAAALI*SSGSSDKQTDNWGT
Trigger: TGTACCCCAGTTGTCAGTCTGCTTGTCAGAAGAACCGGAAGATCATATTAAGGCTGCAGCTGCTTGGGCCTTAGGACAGATTGGAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000456231.6
ENST00000488555.5
ENST00000538630.2
CDS CCA 90 bp ATTGGCCAGTCTCCCAAGAGCCAAAGCAGCAGTCTGTTGAATTGTTaGGACCACGTCCAGAAGAAGAGTTCTCAGCAAAGACATTACACC +
Preference number: 5 (lower is better)
Translates to: IGQSPKSQSSSLLNC*DHVQKKSSQQRHYT
Trigger: GGTGTAATGTCTTTGCTGAGAACTCTTCTTCTGGACGTGGTCCCAACAATTCAACAGACTGCTGCTTTGGCTCTTGGGAGACTGGCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000435326.5
ENST00000456231.6
ENST00000538630.2
CDS-3UTR CAA 90 bp GTTGATAGCTGTCCACCCTCTGCAGAAGTGTATCTGAATATCCAGGGGAATAATAGCCGTGTGTTCCCTTaGCAGGACCCAATGCAGTCA +
Preference number: 5 (lower is better)
Translates to: VDSCPPSAEVYLNIQGNNSRVFP*QDPMQS
Trigger: TGACTGCATTGGGTCCTGCAAAGGGAACACACGGCT...ATTATTCCCCTGGATATTCAGATACACTTCTGCAGAGGGTGGACAGCTATCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS-3UTR CAA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAAAGTCGTCGAGCTTaGCTATCATGCGGCAGCACC +
Preference number: 5 (lower is better)
Translates to: ASESPSSALYICHQFPPSKSRRA*LSCGST
Trigger: GGTGCTGCCGCATGATAGCAAAGCTCGACGACTTTT...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS TCA 90 bp AAGCATATGACCAGCGTATCCAGTGCTCCACAATCGACTATTGCCTaGGCTAGCTGGGGAGAATGTTTACCAACTGCTCGTAACACAAAG +
Preference number: 5 (lower is better)
Translates to: KHMTSVSSAPQSTIA*ASWGECLPTARNTK
Trigger: CTTTGTGTTACGAGCAGTTGGTAAACATTCTCCCCAGCTAGCTCAGGCAATAGTCGATTGTGGAGCACTGGATACGCTGGTCATATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000435326.5
ENST00000538630.2
CDS GCA 90 bp GCAACAGCTCCTGCATCCACTACTGTCTGTGCTAACTCTGGAGAATaGTTTGCAATATCACTGAGGGCCGAAGCAGCAATCCTTTTCAAA +
Preference number: 5 (lower is better)
Translates to: ATAPASTTVCANSGE*FAISLRAEAAILFK
Trigger: TTTGAAAAGGATTGCTGCTTCGGCCCTCAGTGATATTGCAAAGCATTCTCCAGAGTTAGCACAGACAGTAGTGGATGCAGGAGCTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp CTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTCCTGGCCTTCTGGTATaGCTCGAACACTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: LGKVTLGQGSILHACFFVPGLLV*LEHLQH
Trigger: GTGCTGCAAGTGTTCGAGCAATACCAGAAGGCCAGG...AACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313311.10
ENST00000376624.8
CDS-3UTR CAA 90 bp ACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTCTCCACAATCGACTATaGCCTGAGCTAGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: TWESDVRTRIHFTCLLLCLHNRL*PELAGE
Trigger: CTCCCCAGCTAGCTCAGGCAATAGTCGATTGTGGAG...ACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp AGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATCTCCACAATCGACTATaGCCTGAGCTAGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: RVSFKCPVYLSSVSSFKDLHNRL*PELAGE
Trigger: CTCCCCAGCTAGCTCAGGCAATAGTCGATTGTGGAG...ATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp TGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAGGGAGAGCACTCCACAATCGACTATaGCCTGAGCTAGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: CSFMSRARLRNLSMRGRALHNRL*PELAGE
Trigger: CTCCCCAGCTAGCTCAGGCAATAGTCGATTGTGGAG...TGCTCTCCCTCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp GAAACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTAGCCGTGTGTTCCCTTaGCAGGACCCAATGCAGTCA +
Preference number: 5 (lower is better)
Translates to: ETWESDVRTRIHFTCLLLSRVFP*QDPMQS
Trigger: TGACTGCATTGGGTCCTGCAAAGGGAACACACGGCT...AAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp ACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTAGCCGTGTGTTCCCTTaGCAGGACCCAATGCAGTCA +
Preference number: 5 (lower is better)
Translates to: TWESDVRTRIHFTCLLLCSRVFP*QDPMQS
Trigger: TGACTGCATTGGGTCCTGCAAAGGGAACACACGGCT...ACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS TCA 90 bp CCACTACTGTCTGTGCTAACTCTGGAGAATGCTTTGCAATATCACTaGGGGCCGAAGCAGCAATCCTTTTCAAAGCAATTTCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: PLLSVLTLENALQYH*GPKQQSFSKQFLAP
Trigger: AGGAGCCAGAAATTGCTTTGAAAAGGATTGCTGCTTCGGCCCTCAGTGATATTGCAAAGCATTCTCCAGAGTTAGCACAGACAGTAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp GAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTCAGCGTCTCGATGTTTaGGGGTCTAGTCGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: EQILCMRMTMNSSSHIQAQRLDV*GSSRQL
Trigger: GAGCTGGCGACTAGACCCCAAAACATCGAGACGCTG...AGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
CDS CCA 90 bp GAATGTCGCACTTCACAACAGCTTCTGCTAGGTCATCATTATAATTaGCCAGTCTCCCAAGAGCCAAAGCAGCAGTCTGTTGAATTGTTG +
Preference number: 5 (lower is better)
Translates to: ECRTSQQLLLGHHYN*PVSQEPKQQSVELL
Trigger: CAACAATTCAACAGACTGCTGCTTTGGCTCTTGGGAGACTGGCCAATTATAATGATGACCTAGCAGAAGCTGTTGTGAAGTGCGACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000435326.5
ENST00000456231.6
ENST00000538630.2
CDS-3UTR CAA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATCCTGGCCTTCTGGTATaGCTCGAACACTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNPGLLV*LEHLQH
Trigger: GTGCTGCAAGTGTTCGAGCAATACCAGAAGGCCAGG...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313311.10
ENST00000376624.8
CDS-3UTR CAA 90 bp ACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTCAGCAGTCTGTTGAATaGTTGGGACCACGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: TWESDVRTRIHFTCLLLCQQSVE*LGPRPE
Trigger: TTCTGGACGTGGTCCCAACAATTCAACAGACTGCTG...ACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp GAAACTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTCAAAGCAGCAGTCTGTaGAATTGTTGGGACCACGTC +
Preference number: 5 (lower is better)
Translates to: ETWESDVRTRIHFTCLLLQSSSL*NCWDHV
Trigger: GACGTGGTCCCAACAATTCAACAGACTGCTGCTTTG...AAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp CTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGACTCCACAATCGACTATaGCCTGAGCTAGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: LLLCSFMSRARLRNLSMRLHNRL*PELAGE
Trigger: CTCCCCAGCTAGCTCAGGCAATAGTCGATTGTGGAG...TCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp CATTTTACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCAGGCTGCAGCCTCCTaGACTCCAGGGTCAAAATCT +
Preference number: 5 (lower is better)
Translates to: HFTCLLLCSFMSRARLRNQAAAS*TPGSKS
Trigger: AGATTTTGACCCTGGAGTCAAGGAGGCTGCAGCCTG...GTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp AGGCCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGCAGGCTGCAGCCTCCTaGACTCCAGGGTCAAAATCT +
Preference number: 5 (lower is better)
Translates to: RPFNVFLKSTCRTNPMHAQAAAS*TPGSKS
Trigger: AGATTTTGACCCTGGAGTCAAGGAGGCTGCAGCCTG...CGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATCAGGCTGCAGCCTCCTaGACTCCAGGGTCAAAATCT +
Preference number: 5 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNQAAAS*TPGSKS
Trigger: AGATTTTGACCCTGGAGTCAAGGAGGCTGCAGCCTG...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp CTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAAGCCGTGTGTTCCCTTaGCAGGACCCAATGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LLLCSFMSRARLRNLSMRSRVFP*QDPMQS
Trigger: TGACTGCATTGGGTCCTGCAAAGGGAACACACGGCT...TCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp GCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCATCAGTTATTAAGTGGTaGATAGCTGTCCACCCTCTG +
Preference number: 5 (lower is better)
Translates to: ASESPSSALYICHQFPPSSVIKW*IAVHPL
Trigger: CAGAGGGTGGACAGCTATCAACCACTTAATAACTGA...TGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp AGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATTTAAAAGTCGTCGAGCTTaGCTATCATGCGGCAGCACC +
Preference number: 5 (lower is better)
Translates to: SLLQVPCISVISFLLQRFKSRRA*LSCGST
Trigger: GGTGCTGCCGCATGATAGCAAAGCTCGACGACTTTT...AAATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS TCA 90 bp TTTCTGTTGACATGTACAAAGAAAGCAGAACTGGCAAAGTATTTGTaGCTGCAACAGCCCGTGCGTGTTCAGGAGTGTGTCTTCCAATCT +
Preference number: 5 (lower is better)
Translates to: FLLTCTKKAELAKYL*LQQPVRVQECVFQS
Trigger: AGATTGGAAGACACACTCCTGAACACGCACGGGCTGTTGCAGTCACAAATACTTTGCCAGTTCTGCTTTCTTTGTACATGTCAACAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000456231.6
ENST00000487973.1
ENST00000488555.5
ENST00000490361.5
ENST00000538630.2
CDS-3UTR CAA 90 bp CATTTTACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACGTATTGCTCGAACACTaGCAGCACCTGCCTCTGACT +
Preference number: 5 (lower is better)
Translates to: HFTCLLLCSFMSRARLRNVLLEH*QHLPLT
Trigger: AGTCAGAGGCAGGTGCTGCAAGTGTTCGAGCAATAC...GTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313311.10
ENST00000376624.8
CDS-3UTR CAA 90 bp CTTGGGAAAGTGACGTTAGGACAAGGATCCATTTTACATGCCTGCTTCTTTGTTCAGTCTGTTGAATTGTaGGGACCACGTCCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: LGKVTLGQGSILHACFFVQSVEL*GPRPEE
Trigger: TTCTTCTGGACGTGGTCCCAACAATTCAACAGACTG...AACAAAGAAGCAGGCATGTAAAATGGATCCTTGTCCTAACGTCACTTTCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp ACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCACAAAGCAGCAGTCTGTaGAATTGTTGGGACCACGTC +
Preference number: 5 (lower is better)
Translates to: TCLLLCSFMSRARLRNLSQSSSL*NCWDHV
Trigger: GACGTGGTCCCAACAATTCAACAGACTGCTGCTTTG...TGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp AGCATCAGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCCTTAACTATATCTCATaGGAGGTGTCTGCATGTACG +
Preference number: 5 (lower is better)
Translates to: SIRVSFKCPVYLSSVSSFLNYIS*EVSACT
Trigger: CGTACATGCAGACACCTCCAATGAGATATAGTTAAG...GAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCTGATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp GTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATGAACCTGGCCTTCTGGTATaGCTCGAACACTGCGGGAGA +
Preference number: 5 (lower is better)
Translates to: VFLKSTCRTNPMHANDHEPGLLV*LEHCGR
Trigger: TCTCCCGCAGTGTTCGAGCAATACCAGAAGGCCAGG...TTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS-3UTR CAA 90 bp AGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATTTCAGTCTGTTGAATTGTaGGGACCACGTCCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: SLLQVPCISVISFLLQRFQSVEL*GPRPEE
Trigger: TTCTTCTGGACGTGGTCCCAACAATTCAACAGACTG...AAATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAGCAGTCTGTTGAATaGTTGGGACCACGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: PVEQILCMRMTMNSSSHIQQSVE*LGPRPE
Trigger: TTCTGGACGTGGTCCCAACAATTCAACAGACTGCTG...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATCAAAGCAGCAGTCTGTaGAATTGTTGGGACCACGTC +
Preference number: 5 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNQSSSL*NCWDHV
Trigger: GACGTGGTCCCAACAATTCAACAGACTGCTGCTTTG...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp CCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGTATTGCTCGAACACTaGCAGCACCTGCCTCTGACT +
Preference number: 5 (lower is better)
Translates to: PFNVFLKSTCRTNPMHANVLLEH*QHLPLT
Trigger: AGTCAGAGGCAGGTGCTGCAAGTGTTCGAGCAATAC...ATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313311.10
ENST00000376624.8
CDS-3UTR CAA 90 bp CATTTTACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCAGTCTGTTGAATTGTaGGGACCACGTCCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: HFTCLLLCSFMSRARLRNQSVEL*GPRPEE
Trigger: TTCTTCTGGACGTGGTCCCAACAATTCAACAGACTG...GTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp TGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCAATGAGAGGGAGAGCAACTGTTGATGTATTCTaGAAGGAGAGAACCAGGTTC +
Preference number: 5 (lower is better)
Translates to: CSFMSRARLRNLSMRGRATVDVF*KERTRF
Trigger: GAACCTGGTTCTCTCCTTCAAGAATACATCAACAGT...TGCTCTCCCTCTCATTGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp AGAGTCTCCTTCAAGTGCCCTGTATATCTGTCATCAGTTTCCTCCTTCAAAGATACTGTTGATGTATTCTaGAAGGAGAGAACCAGGTTC +
Preference number: 5 (lower is better)
Translates to: RVSFKCPVYLSSVSSFKDTVDVF*KERTRF
Trigger: GAACCTGGTTCTCTCCTTCAAGAATACATCAACAGT...ATCTTTGAAGGAGGAAACTGATGACAGATATACAGGGCACTTGAAGGAGACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp AACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATCAGCAGTCTGTTGAATaGTTGGGACCACGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: NVFLKSTCRTNPMHANDHQQSVE*LGPRPE
Trigger: TTCTGGACGTGGTCCCAACAATTCAACAGACTGCTG...ATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp GTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATGAACAAAGCAGCAGTCTGTaGAATTGTTGGGACCACGTC +
Preference number: 5 (lower is better)
Translates to: VFLKSTCRTNPMHANDHEQSSSL*NCWDHV
Trigger: GACGTGGTCCCAACAATTCAACAGACTGCTGCTTTG...TTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp GAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTTCAGTTATTAAGTGGTaGATAGCTGTCCACCCTCTG +
Preference number: 5 (lower is better)
Translates to: EQILCMRMTMNSSSHIQASVIKW*IAVHPL
Trigger: CAGAGGGTGGACAGCTATCAACCACTTAATAACTGA...AGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATTCAGTTATTAAGTGGTaGATAGCTGTCCACCCTCTG +
Preference number: 5 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNSVIKW*IAVHPL
Trigger: CAGAGGGTGGACAGCTATCAACCACTTAATAACTGA...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp ACATGCCTGCTTCTTTGTTCATTCATGAGCAGAGCTAGACTAAGAAACCTTTCACTTAACTATATCTCATaGGAGGTGTCTGCATGTACG +
Preference number: 5 (lower is better)
Translates to: TCLLLCSFMSRARLRNLSLNYIS*EVSACT
Trigger: CGTACATGCAGACACCTCCAATGAGATATAGTTAAG...TGAAAGGTTTCTTAGTCTAGCTCTGCTCATGAATGAACAAAGAAGCAGGCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp AGGCCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGACTGTTGATGTATTCTaGAAGGAGAGAACCAGGTTC +
Preference number: 5 (lower is better)
Translates to: RPFNVFLKSTCRTNPMHATVDVF*KERTRF
Trigger: GAACCTGGTTCTCTCCTTCAAGAATACATCAACAGT...CGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp GTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATCAGTTATTAAGTGGTaGATAGCTGTCCACCCTCTG +
Preference number: 5 (lower is better)
Translates to: VFLKSTCRTNPMHANDHESVIKW*IAVHPL
Trigger: CAGAGGGTGGACAGCTATCAACCACTTAATAACTGA...TTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp CCTGTAGAACAAATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTACATGTTTCAGAATATaGGGAGGAGCATCATATAGA +
Preference number: 5 (lower is better)
Translates to: PVEQILCMRMTMNSSSHITCFRI*GGASYR
Trigger: TCTATATGATGCTCCTCCCAATATTCTGAAACATGT...AATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp ATCCTATGCATGCGAATGACCATGAATAGTTCCTCACATATTCAAGCTACGAATACATGTTTCAGAATATaGGGAGGAGCATCATATAGA +
Preference number: 5 (lower is better)
Translates to: ILCMRMTMNSSSHIQATNTCFRI*GGASYR
Trigger: TCTATATGATGCTCCTCCCAATATTCTGAAACATGT...ATTCGTAGCTTGAATATGTGAGGAACTATTCATGGTCATTCGCATGCATAGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp AGGCCCTTTAACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGACATGTTTCAGAATATaGGGAGGAGCATCATATAGA +
Preference number: 5 (lower is better)
Translates to: RPFNVFLKSTCRTNPMHATCFRI*GGASYR
Trigger: TCTATATGATGCTCCTCCCAATATTCTGAAACATGT...CGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTTAAAGGGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS-3UTR CAA 90 bp GTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATGAACTTAACTATATCTCATaGGAGGTGTCTGCATGTACG +
Preference number: 5 (lower is better)
Translates to: VFLKSTCRTNPMHANDHELNYIS*EVSACT
Trigger: CGTACATGCAGACACCTCCAATGAGATATAGTTAAG...TTCATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS GCA 90 bp TTGGAACTCTTTTGGTCAAGGAGTTCTCATAAACTTCCTAAAAAGTaGACAAACTTGCAACTCTGGAAAGAATTTACTCACTATTTCCTC +
Preference number: 5 (lower is better)
Translates to: LELFWSRSSHKLPKK*TNLQLWKEFTHYFL
Trigger: GAGGAAATAGTGAGTAAATTCTTTCCAGAGTTGCAAGTTTGTGCACTTTTTAGGAAGTTTATGAGAACTCCTTGACCAAAAGAGTTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS-3UTR CAA 90 bp AACGTGTTTTTAAAATCTACCTGTAGAACAAATCCTATGCATGCGAATGACCATACATGTTTCAGAATATaGGGAGGAGCATCATATAGA +
Preference number: 5 (lower is better)
Translates to: NVFLKSTCRTNPMHANDHTCFRI*GGASYR
Trigger: TCTATATGATGCTCCTCCCAATATTCTGAAACATGT...ATGGTCATTCGCATGCATAGGATTTGTTCTACAGGTAGATTTTAAAAACACGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS GCA 72 bp ATGGCGCCCCCGCCGCCGTCTGCCCTCCTCGAGCTCTaGGGGGAAGCCGCTCGGCCTGCGAGTCCACCAAGG +
Preference number: 6 (lower is better)
Translates to: MAPPPPSALLEL*GEAARPASPPR
Trigger: CCTTGGTGGACTCGCAGGCCGAGCGGCTTCCCCGCAGAGCTCGAGGAGGGCAGACGGCGGCGGGGGCGCCAT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000435326.5
ENST00000456231.6
ENST00000488555.5
CDS CCA 72 bp GCCGCTCGGCCTGCGAGTCCACCAAGGGGGCGATCGTaGCGACGACTCGGCCTCCGACGGGAGCCGCTTCTC +
Preference number: 6 (lower is better)
Translates to: AARPASPPRGRS*RRLGLRREPLL
Trigger: GAGAAGCGGCTCCCGTCGGAGGCCGAGTCGTCGCCACGATCGCCCCCTTGGTGGACTCGCAGGCCGAGCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000456231.6
ENST00000488555.5
CDS CAA 90 bp CCTCGGCGCCAGCTAGTTAGGGCACCTGCCCGCCTCGGCCCTACCTaGCAGCACCTGCCTCTGACTCATGGCGCCCCCGCCGCCGTCTGC +
Preference number: 6 (lower is better)
Translates to: PRRQLVRAPARLGPT*QHLPLTHGAPAAVC
Trigger: GCAGACGGCGGCGGGGGCGCCATGAGTCAGAGGCAGGTGCTGCAAGGTAGGGCCGAGGCGGGCAGGTGCCCTAACTAGCTGGCGCCGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS CCA 72 bp CTGGTATTGCTCGAACACTGCGGGAGAGAGAGTCGGTaGAGCCCACCGCACCCGGGTCTCCTCGGCGCCAGC +
Preference number: 6 (lower is better)
Translates to: LVLLEHCGRESR*SPPHPGLLGAS
Trigger: GCTGGCGCCGAGGAGACCCGGGTGCGGTGGGCTCCACCGACTCTCTCTCCCGCAGTGTTCGAGCAATACCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS CCA 72 bp CCGGGCTCACCCGCGTTCTGCAGCGTCTCGATGTTTTaGGGTCTAGTCGCCAGCTCCGCCACCATCTGCACG +
Preference number: 6 (lower is better)
Translates to: PGSPAFCSVSMF*GLVASSATICT
Trigger: CGTGCAGATGGTGGCGGAGCTGGCGACTAGACCCCAAAACATCGAGACGCTGCAGAACGCGGGTGAGCCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435326.5
CDS CAA 90 bp GGTTCGGGCTCCGGGCTCACCCGCGTTCTGCAGCGTCTCGATGTTTaGGGGTCTAGTCGCCAGCTCCGCCACCATCTGCACGAACTGGGT +
Preference number: 6 (lower is better)
Translates to: GSGSGLTRVLQRLDV*GSSRQLRHHLHELG
Trigger: ACCCAGTTCGTGCAGATGGTGGCGGAGCTGGCGACTAGACCCCAAAACATCGAGACGCTGCAGAACGCGGGTGAGCCCGGAGCCCGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435326.5
CDS TCA 72 bp TTCTGGTATTGCTCGAACACTTGCAGCACCTGCCTCTaGCTCATGGCGCCCCCGCCGCCGTCTGCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: FWYCSNTCSTCL*LMAPPPPSALL
Trigger: GAGGAGGGCAGACGGCGGCGGGGGCGCCATGAGTCAGAGGCAGGTGCTGCAAGTGTTCGAGCAATACCAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313311.10
ENST00000376624.8
ENST00000435326.5
ENST00000456231.6
ENST00000488555.5
CDS GCA 72 bp GAACTGGGTCCTGGCCTTCTGGTATTGCTCGAACACTaGGGGAGAGAGAGTCGGTGGAGCCCACCGCACCCG +
Preference number: 6 (lower is better)
Translates to: ELGPGLLVLLEH*GRESRWSPPHP
Trigger: CGGGTGCGGTGGGCTCCACCGACTCTCTCTCCCGCAGTGTTCGAGCAATACCAGAAGGCCAGGACCCAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS CAA 72 bp TCCGGGCTCACCCGCGTTCTGCAGCGTCTCGATGTTTaGGGGTCTAGTCGCCAGCTCCGCCACCATCTGCAC +
Preference number: 6 (lower is better)
Translates to: SGLTRVLQRLDV*GSSRQLRHHLH
Trigger: GTGCAGATGGTGGCGGAGCTGGCGACTAGACCCCAAAACATCGAGACGCTGCAGAACGCGGGTGAGCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435326.5
CDS CAA 90 bp CAGCTCCGCCACCATCTGCACGAACTGGGTCCTGGCCTTCTGGTATaGCTCGAACACTGCGGGAGAGAGAGTCGGTGGAGCCCACCGCAC +
Preference number: 6 (lower is better)
Translates to: QLRHHLHELGPGLLV*LEHCGRESRWSPPH
Trigger: GTGCGGTGGGCTCCACCGACTCTCTCTCCCGCAGTGTTCGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGCAGATGGTGGCGGAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS CCA 72 bp TCGCCAGCTCCGCCACCATCTGCACGAACTGGGTCCTaGCCTTCTGGTATTGCTCGAACACTGCGGGAGAGA +
Preference number: 6 (lower is better)
Translates to: SPAPPPSARTGS*PSGIARTLRER
Trigger: TCTCTCCCGCAGTGTTCGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGCAGATGGTGGCGGAGCTGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS GCA 72 bp ACCATCTGCACGAACTGGGTCCTGGCCTTCTGGTATTaGTCGAACACTGCGGGAGAGAGAGTCGGTGGAGCC +
Preference number: 6 (lower is better)
Translates to: TICTNWVLAFWY*SNTAGERVGGA
Trigger: GGCTCCACCGACTCTCTCTCCCGCAGTGTTCGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGCAGATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS CCA 72 bp TCGCCAGCTCCGCCACCATCTGCACGAACTGGGTCCTaGCCTTCTGGTATTGCTCGAACACTTGCAGCACCT +
Preference number: 6 (lower is better)
Translates to: SPAPPPSARTGS*PSGIARTLAAP
Trigger: AGGTGCTGCAAGTGTTCGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGCAGATGGTGGCGGAGCTGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313311.10
ENST00000376624.8
ENST00000435326.5
ENST00000456231.6
ENST00000488555.5
CDS CCA 72 bp GACATTACACCCGCGTTCTGCAGCGTCTCGATGTTTTaGGGTCTAGTCGCCAGCTCCGCCACCATCTGCACG +
Preference number: 6 (lower is better)
Translates to: DITPAFCSVSMF*GLVASSATICT
Trigger: CGTGCAGATGGTGGCGGAGCTGGCGACTAGACCCCAAAACATCGAGACGCTGCAGAACGCGGGTGTAATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000456231.6
CDS CCA 72 bp TCCGCCACCATCTGCACGAACTGGGTCCTGGCCTTCTaGTATTGCTCGAACACTGCGGGAGAGAGAGTCGGT +
Preference number: 6 (lower is better)
Translates to: SATICTNWVLAF*YCSNTAGERVG
Trigger: ACCGACTCTCTCTCCCGCAGTGTTCGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGCAGATGGTGGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS CAA 72 bp CACCATCTGCACGAACTGGGTCCTGGCCTTCTGGTATaGCTCGAACACTGCGGGAGAGAGAGTCGGTGGAGC +
Preference number: 6 (lower is better)
Translates to: HHLHELGPGLLV*LEHCGRESRWS
Trigger: GCTCCACCGACTCTCTCTCCCGCAGTGTTCGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGCAGATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376603.6
CDS GCA 72 bp ATGTTTTGGGGTCTAGTCGCCAGCTCCGCCACCATCTaGACGAACTGGGTCCTGGCCTTCTGGTATTGCTCG +
Preference number: 6 (lower is better)
Translates to: MFWGLVASSATI*TNWVLAFWYCS
Trigger: CGAGCAATACCAGAAGGCCAGGACCCAGTTCGTGCAGATGGTGGCGGAGCTGGCGACTAGACCCCAAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000435326.5
ENST00000456231.6
ENST00000488555.5
CDS CAA 72 bp AGACATTACACCCGCGTTCTGCAGCGTCTCGATGTTTaGGGGTCTAGTCGCCAGCTCCGCCACCATCTGCAC +
Preference number: 6 (lower is better)
Translates to: RHYTRVLQRLDV*GSSRQLRHHLH
Trigger: GTGCAGATGGTGGCGGAGCTGGCGACTAGACCCCAAAACATCGAGACGCTGCAGAACGCGGGTGTAATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000456231.6
CDS CAA 72 bp CCAAGCATCATGATGCCAGGCAGCCGTGTGTTCCCTTaGCAGGACCCAATGCAGTCAATCACGGCAGCAACC +
Preference number: 6 (lower is better)
Translates to: PSIMMPGSRVFP*QDPMQSITAAT
Trigger: GGTTGCTGCCGTGATTGACTGCATTGGGTCCTGCAAAGGGAACACACGGCTGCCTGGCATCATGATGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS TCA 72 bp GGTTCTCAGAATGAGCTGCTACATAACCAAGCATCATaGTGCCAGGCAGCCGTGTGTTCCCTTTGCAGGACC +
Preference number: 6 (lower is better)
Translates to: GSQNELLHNQAS*CQAAVCSLCRT
Trigger: GGTCCTGCAAAGGGAACACACGGCTGCCTGGCATCATGATGCTTGGTTATGTAGCAGCTCATTCTGAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS TCA 72 bp TTGGCCAGTCTCCCAAGAGCCAAAGCAGCAGTCTGTTaGATTGTTGGGACCACGTCCAGAAGAAGAGTTCTC +
Preference number: 6 (lower is better)
Translates to: LASLPRAKAAVC*IVGTTSRRRVL
Trigger: GAGAACTCTTCTTCTGGACGTGGTCCCAACAATTCAACAGACTGCTGCTTTGGCTCTTGGGAGACTGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000435326.5
ENST00000456231.6
ENST00000538630.2
CDS TCA 72 bp GAACGGTATGAAGAGCTGTCAAGTCACATGGCAGCTTaGGTGGGGAGCCTCATCTCTGATGAGATTGCACTG +
Preference number: 6 (lower is better)
Translates to: ERYEELSSHMAA*VGSLISDEIAL
Trigger: CAGTGCAATCTCATCAGAGATGAGGCTCCCCACTCAAGCTGCCATGTGACTTGACAGCTCTTCATACCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487973.1
CDS CAA 72 bp CCAGTCTCCCAAGAGCCAAAGCAGCAGTCTGTTGAATaGTTGGGACCACGTCCAGAAGAAGAGTTCTCAGCA +
Preference number: 6 (lower is better)
Translates to: PVSQEPKQQSVE*LGPRPEEEFSA
Trigger: TGCTGAGAACTCTTCTTCTGGACGTGGTCCCAACAATTCAACAGACTGCTGCTTTGGCTCTTGGGAGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000435326.5
ENST00000456231.6
ENST00000538630.2
CDS CAA 72 bp GTCTCCCAAGAGCCAAAGCAGCAGTCTGTTGAATTGTaGGGACCACGTCCAGAAGAAGAGTTCTCAGCAAAG +
Preference number: 6 (lower is better)
Translates to: VSQEPKQQSVEL*GPRPEEEFSAK
Trigger: CTTTGCTGAGAACTCTTCTTCTGGACGTGGTCCCAACAATTCAACAGACTGCTGCTTTGGCTCTTGGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000435326.5
ENST00000456231.6
ENST00000538630.2
CDS CAA 72 bp ATTGGCCAGTCTCCCAAGAGCCAAAGCAGCAGTCTGTaGAATTGTTGGGACCACGTCCAGAAGAAGAGTTCT +
Preference number: 6 (lower is better)
Translates to: IGQSPKSQSSSL*NCWDHVQKKSS
Trigger: AGAACTCTTCTTCTGGACGTGGTCCCAACAATTCAACAGACTGCTGCTTTGGCTCTTGGGAGACTGGCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000435326.5
ENST00000456231.6
ENST00000538630.2
CDS TCA 72 bp ATCTGTCCTAAGGCCCAAGCAGCTGCAGCCTTAATATaGTCTTCCGGTTCTTCTGACAAGCAGACTGACAAC +
Preference number: 6 (lower is better)
Translates to: ICPKAQAAAALI*SSGSSDKQTDN
Trigger: GTTGTCAGTCTGCTTGTCAGAAGAACCGGAAGATCATATTAAGGCTGCAGCTGCTTGGGCCTTAGGACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000456231.6
ENST00000488555.5
ENST00000538630.2
CDS GCA 72 bp GTACAAAGAAAGCAGAACTGGCAAAGTATTTGTGACTaGAACAGCCCGTGCGTGTTCAGGAGTGTGTCTTCC +
Preference number: 6 (lower is better)
Translates to: VQRKQNWQSICD*NSPCVFRSVSS
Trigger: GGAAGACACACTCCTGAACACGCACGGGCTGTTGCAGTCACAAATACTTTGCCAGTTCTGCTTTCTTTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000456231.6
ENST00000487973.1
ENST00000488555.5
ENST00000490361.5
ENST00000538630.2
CDS CAA 90 bp AATTGGCCAGTCTCCCAAGAGCCAAAGCAGCAGTCTGTTGAATTGTaGGGACCACGTCCAGAAGAAGAGTTCTCAGCAAAGACATTACAC +
Preference number: 6 (lower is better)
Translates to: NWPVSQEPKQQSVEL*GPRPEEEFSAKTLH
Trigger: GTGTAATGTCTTTGCTGAGAACTCTTCTTCTGGACGTGGTCCCAACAATTCAACAGACTGCTGCTTTGGCTCTTGGGAGACTGGCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000435326.5
ENST00000456231.6
ENST00000538630.2
CDS CAA 90 bp GCATTATGTCTTGCAATATATCTAAGTGCCCAGGCTGCAGCCTCCTaGACTCCAGGGTCAAAATCTTCCAAGCATATGACCAGCGTATCC +
Preference number: 6 (lower is better)
Translates to: ALCLAIYLSAQAAAS*TPGSKSSKHMTSVS
Trigger: GGATACGCTGGTCATATGCTTGGAAGATTTTGACCCTGGAGTCAAGGAGGCTGCAGCCTGGGCACTTAGATATATTGCAAGACATAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000435326.5
ENST00000538630.2
CDS CAA 72 bp TTAAGGCCACCACTTGTTACAAAAAGTCGTCGAGCTTaGCTATCATGCGGCAGCACCTTACTGAACTGTCCA +
Preference number: 6 (lower is better)
Translates to: LRPPLVTKSRRA*LSCGSTLLNCP
Trigger: TGGACAGTTCAGTAAGGTGCTGCCGCATGATAGCAAAGCTCGACGACTTTTTGTAACAAGTGGTGGCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376603.6
ENST00000376624.8
ENST00000490361.5
ENST00000538630.2
CDS CAA 90 bp TATAATTGGCCAGTCTCCCAAGAGCCAAAGCAGCAGTCTGTTGAATaGTTGGGACCACGTCCAGAAGAAGAGTTCTCAGCAAAGACATTA +
Preference number: 6 (lower is better)
Translates to: YNWPVSQEPKQQSVE*LGPRPEEEFSAKTL
Trigger: TAATGTCTTTGCTGAGAACTCTTCTTCTGGACGTGGTCCCAACAATTCAACAGACTGCTGCTTTGGCTCTTGGGAGACTGGCCAATTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000435326.5
ENST00000456231.6
ENST00000538630.2
CDS CAA 90 bp ATCATTATAATTGGCCAGTCTCCCAAGAGCCAAAGCAGCAGTCTGTaGAATTGTTGGGACCACGTCCAGAAGAAGAGTTCTCAGCAAAGA +
Preference number: 6 (lower is better)
Translates to: IIIIGQSPKSQSSSL*NCWDHVQKKSSQQR
Trigger: TCTTTGCTGAGAACTCTTCTTCTGGACGTGGTCCCAACAATTCAACAGACTGCTGCTTTGGCTCTTGGGAGACTGGCCAATTATAATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000435326.5
ENST00000456231.6
ENST00000538630.2
CDS GCA 72 bp TGCATTATGTCTTGCAATATATCTAAGTGCCCAGGCTaGAGCCTCCTTGACTCCAGGGTCAAAATCTTCCAA +
Preference number: 6 (lower is better)
Translates to: CIMSCNISKCPG*SLLDSRVKIFQ
Trigger: TTGGAAGATTTTGACCCTGGAGTCAAGGAGGCTGCAGCCTGGGCACTTAGATATATTGCAAGACATAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000435326.5
ENST00000538630.2
CDS GCA 72 bp GTCCTTCAGACAGGTAAGTACAACTGGAAAAATCTCTaGTTCAACAACCATTTCTGCCAGATCCACGGAATG +
Preference number: 6 (lower is better)
Translates to: VLQTGKYNWKNL*FNNHFCQIHGM
Trigger: CATTCCGTGGATCTGGCAGAAATGGTTGTTGAAGCAGAGATTTTTCCAGTTGTACTTACCTGTCTGAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000538630.2
CDS TCA 72 bp AGCTGCTTTCTTGTAGAAGCGATTCTGTTCTGCCAATaGATAAACAAGCTGTGGAAGAATGTCGCACTTCAC +
Preference number: 6 (lower is better)
Translates to: SCFLVEAILFCQ*INKLWKNVALH
Trigger: GTGAAGTGCGACATTCTTCCACAGCTTGTTTATTCATTGGCAGAACAGAATCGCTTCTACAAGAAAGCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313311.10
ENST00000376603.6
ENST00000376624.8
ENST00000435326.5
ENST00000538630.2
CDS CAA 72 bp CTTGATCCCAGGATTCTAGGAATTTTCTTCCACGGGTaGTTAGTTTCTCCACTTGTTCTTACTGAACTGTCC +
Preference number: 6 (lower is better)
Translates to: LDPRILGIFFHG*LVSPLVLTELS
Trigger: GGACAGTTCAGTAAGAACAAGTGGAGAAACTAACAACCCGTGGAAGAAAATTCCTAGAATCCTGGGATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487973.1
CDS GCA 72 bp TTTTGGTCAAGGAGTTCTCATAAACTTCCTAAAAAGTaGACAAACTTGCAACTCTGGAAAGAATTTACTCAC +
Preference number: 6 (lower is better)
Translates to: FWSRSSHKLPKK*TNLQLWKEFTH
Trigger: GTGAGTAAATTCTTTCCAGAGTTGCAAGTTTGTGCACTTTTTAGGAAGTTTATGAGAACTCCTTGACCAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376603.6