RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPAG16 (Homo sapiens)

Ensembl gene IDs: ENSG00000144451

Ensembl transcript IDs: ENST00000272898.11, ENST00000331683.10, ENST00000406979.6, ENST00000413312.5, ENST00000420497.6, ENST00000432529.6, ENST00000440779.5, ENST00000447990.1, ENST00000451561.1, ENST00000452556.5, ENST00000480494.1

Found 528 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTGAGAACCAGGTCCAGCCACTGTGCACAGCCAGGCATGCCAGCTaGTGCAGTGGGGCAGGCAGCTCCAGGCACTGGCACAGGCACTGG +
Preference number: 1 (lower is better)
Translates to: SENQVQPLCTARHAS*CSGAGSSRHWHRHW
Trigger: CCAGTGCCTGTGCCAGTGCCTGGAGCTGCCTGCCCCACTGCAGCAGCTGGCATGCCTGGCTGTGCACAGTGGCTGGACCTGGTTCTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
3UTR TCA 90 bp CCAAAGGCAAGCCAGGAGCAGAGAGGTGAGGGGTGTGTGAGCAAGTaGGAACCAGGTCCAGCCACTGTGCACAGCCAGGCATGCCAGCTG +
Preference number: 1 (lower is better)
Translates to: PKASQEQRGEGCVSK*EPGPATVHSQACQL
Trigger: CAGCTGGCATGCCTGGCTGTGCACAGTGGCTGGACCTGGTTCTCACTTGCTCACACACCCCTCACCTCTCTGCTCCTGGCTTGCCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
3UTR TCA 90 bp CACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGTGAGGGGTGTGTaGGCAAGTGAGAACCAGGTCCAGCCACTGTGCACAGCCAGGCAT +
Preference number: 1 (lower is better)
Translates to: HTSQRQARSREVRGV*ASENQVQPLCTARH
Trigger: ATGCCTGGCTGTGCACAGTGGCTGGACCTGGTTCTCACTTGCTCACACACCCCTCACCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
3UTR GCA 90 bp CCTCTGCAGCGGGATGTGCTGACGGTCAAGACCACGTTCGAACTGTaGCGTCAGAGCCTCCAGAAAAGAGAATCTCCCCGTCGTGAGAAA +
Preference number: 1 (lower is better)
Translates to: PLQRDVLTVKTTFEL*RQSLQKRESPRREK
Trigger: TTTCTCACGACGGGGAGATTCTCTTTTCTGGAGGCTCTGACGGCACAGTTCGAACGTGGTCTTGACCGTCAGCACATCCCGCTGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR TCA 90 bp GCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTGCTaGCGGTCAAGACCACGTTCGAACTGTGCCGTCAGAGCCTCCAGA +
Preference number: 1 (lower is better)
Translates to: AFSSLKGNALCSGMC*RSRPRSNCAVRASR
Trigger: TCTGGAGGCTCTGACGGCACAGTTCGAACGTGGTCTTGACCGTCAGCACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR CCA 90 bp AAGCCAGTCAGTGTGGCCAAATCCCGTGAGAAGCACATTGCATTTTaGAAGGCCCAACACCTTCCAGAGTCGGTCCTCGCCACAGGAGAC +
Preference number: 1 (lower is better)
Translates to: KPVSVAKSREKHIAF*KAQHLPESVLATGD
Trigger: GTCTCCTGTGGCGAGGACCGACTCTGGAAGGTGTTGGGCCTTCCAAAATGCAATGTGCTTCTCACGGGATTTGGCCACACTGACTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR GCA 90 bp TATCCAGTGAGGAGGAAGCCACAAAATTGCCGCAGGAGTGCCATGTaGAGGACCACACTGCGCGGCTGTGTCCTTCAAAGGTCAAAATGC +
Preference number: 1 (lower is better)
Translates to: YPVRRKPQNCRRSAM*RTTLRGCVLQRSKC
Trigger: GCATTTTGACCTTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTTGTGGCTTCCTCCTCACTGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR TCA 90 bp CATCCTGAGTGTCCTCTATCCCTGTCTCCAGCTCCAGTGCAGCTCTaGCAGTGCTCCATCCTTGTCAAAAGGACTGCAGGGAACAGCAAT +
Preference number: 1 (lower is better)
Translates to: HPECPLSLSPAPVQL*QCSILVKRTAGNSN
Trigger: ATTGCTGTTCCCTGCAGTCCTTTTGACAAGGATGGAGCACTGTCAGAGCTGCACTGGAGCTGGAGACAGGGATAGAGGACACTCAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR GCA 90 bp GGAAGCCACAAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTaGGCGGCTGTGTCCTTCAAAGGTCAAAATGCAATCGCCTTTACA +
Preference number: 1 (lower is better)
Translates to: GSHKIAAGVPCAGPH*AAVSFKGQNAIAFT
Trigger: TGTAAAGGCGATTGCATTTTGACCTTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTTGTGGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR CCA 90 bp TTGTCGCCACTGGGATGGAAGCAGCAGTCTGAAAGCCAGTCAGTGTaGCCAAATCCCGTGAGAAGCACATTGCATTTTGGAAGGCCCAAC +
Preference number: 1 (lower is better)
Translates to: LSPLGWKQQSESQSV*PNPVRSTLHFGRPN
Trigger: GTTGGGCCTTCCAAAATGCAATGTGCTTCTCACGGGATTTGGCCACACTGACTGGCTTTCAGACTGCTGCTTCCATCCCAGTGGCGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR TCA 90 bp GATGGAAGCAGCAGTCTGAAAGCCAGTCAGTGTGGCCAAATCCCGTaGGAAGCACATTGCATTTTGGAAGGCCCAACACCTTCCAGAGTC +
Preference number: 1 (lower is better)
Translates to: DGSSSLKASQCGQIP*EAHCILEGPTPSRV
Trigger: GACTCTGGAAGGTGTTGGGCCTTCCAAAATGCAATGTGCTTCTCACGGGATTTGGCCACACTGACTGGCTTTCAGACTGCTGCTTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR TCA 90 bp AAGGTGGAAAGAGCATTGAGGTATAAGGGAAGGACATGGACATTATaGGACCCATGTGTGTTCCTCAGCGTCCCCAGGACTTTGGGAAGA +
Preference number: 1 (lower is better)
Translates to: KVERALRYKGRTWTL*DPCVFLSVPRTLGR
Trigger: TCTTCCCAAAGTCCTGGGGACGCTGAGGAACACACATGGGTCTCATAATGTCCATGTCCTTCCCTTATACCTCAATGCTCTTTCCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR CCA 90 bp GGATTGTCATGCTCTTATTGGCTTCCATCTCCACAAAGCTCAGTTTaGAACTTTCCACAGACCCAAAGCCATGGTGATGGCAGAGCTCAC +
Preference number: 1 (lower is better)
Translates to: GLSCSYWLPSPQSSV*NFPQTQSHGDGRAH
Trigger: GTGAGCTCTGCCATCACCATGGCTTTGGGTCTGTGGAAAGTTCCAAACTGAGCTTTGTGGAGATGGAAGCCAATAAGAGCATGACAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR TCA 90 bp CATGTGTGTTCCTCAGCGTCCCCAGGACTTTGGGAAGACACCAGTTaGTTTCTGTGGTCCTTTCCTCATCATTCTTTAATGACCACCTCA +
Preference number: 1 (lower is better)
Translates to: HVCSSASPGLWEDTS*FLWSFPHHSLMTTS
Trigger: TGAGGTGGTCATTAAAGAATGATGAGGAAAGGACCACAGAAATCAACTGGTGTCTTCCCAAAGTCCTGGGGACGCTGAGGAACACACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR TCA 90 bp GTGATATGGACAAGACTTTCCACCAGGGCAAGGTGGAAAGAGCATTaGGGTATAAGGGAAGGACATGGACATTATGAGACCCATGTGTGT +
Preference number: 1 (lower is better)
Translates to: VIWTRLSTRARWKEH*GIREGHGHYETHVC
Trigger: ACACACATGGGTCTCATAATGTCCATGTCCTTCCCTTATACCTCAATGCTCTTTCCACCTTGCCCTGGTGGAAAGTCTTGTCCATATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR TCA 90 bp AGGCGGATATGGGATGCTGAATGTTACTGTGTTGTTAACAAGGTGTaGAAGAGGTCTTTCCACCCAGGCATGGCCAGATTTGCAATGTTT +
Preference number: 1 (lower is better)
Translates to: RRIWDAECYCVVNKV*KRSFHPGMARFAMF
Trigger: AAACATTGCAAATCTGGCCATGCCTGGGTGGAAAGACCTCTTTCACACCTTGTTAACAACACAGTAACATTCAGCATCCCATATCCGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR TCA 90 bp TCCACAAAGCTCAGTTTGGAACTTTCCACAGACCCAAAGCCATGGTaGTGGCAGAGCTCACCTTATAAATTTTCCTTCTGTCAATTGCCT +
Preference number: 1 (lower is better)
Translates to: STKLSLELSTDPKPW*WQSSPYKFSFCQLP
Trigger: AGGCAATTGACAGAAGGAAAATTTATAAGGTGAGCTCTGCCATCACCATGGCTTTGGGTCTGTGGAAAGTTCCAAACTGAGCTTTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR CCA 90 bp TGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTaGGACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCT +
Preference number: 1 (lower is better)
Translates to: CKCYLLAHLTSSLLV*DYRRHFQALKGMPS
Trigger: AGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTCCCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
3UTR GCA 90 bp TTGCCTGAGCTAAAACTCGACCTGATGAATCAAAATTCACCTCATTaGCAGGACTTGGACCTATATCGATGGACACAATTGGTAACAGCT +
Preference number: 1 (lower is better)
Translates to: LPELKLDLMNQNSPH*QDLDLYRWTQLVTA
Trigger: AGCTGTTACCAATTGTGTCCATCGATATAGGTCCAAGTCCTGGCAATGAGGTGAATTTTGATTCATCAGGTCGAGTTTTAGCTCAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR CCA 90 bp TTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCACCTTCTaGGATGCTAAAATTGTCATCTGGTATCATGTCATTCTGAAGATC +
Preference number: 1 (lower is better)
Translates to: FLGHLNCFCQIFFTF*DAKIVIWYHVILKI
Trigger: GATCTTCAGAATGACATGATACCAGATGACAATTTTAGCATCCCAGAAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR TCA 90 bp CCCATTATCAATAGCCCCCAACAGAGGGATACATTTGTTAACAACTaGCGAACCTACATATCATTATCACCCAAAGTCCACAGTTTATAT +
Preference number: 1 (lower is better)
Translates to: PIINSPQQRDTFVNN*RTYISLSPKVHSLY
Trigger: ATATAAACTGTGGACTTTGGGTGATAATGATATGTAGGTTCGTCAGTTGTTAACAAATGTATCCCTCTGTTGGGGGCTATTGATAATGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432529.6
3UTR TCA 90 bp ACCATTCAGACTGAAAGCAATCAAGAGTTCTGGTCATTCCCATTTTaGTCAAGAAATTGCAGAGAAAGTCTTCTATTACTTCAGGTACTG +
Preference number: 1 (lower is better)
Translates to: TIQTESNQEFWSFPF*SRNCRESLLLLQVL
Trigger: CAGTACCTGAAGTAATAGAAGACTTTCTCTGCAATTTCTTGATCAAAATGGGAATGACCAGAACTCTTGATTGCTTTCAGTCTGAATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR-3UTR GCA 90 bp GCAGCGGGATGTGCTGACGGTCAAGACCACGTTCGAACTGTGCCGTCAGAGCCTCGCAGGAGTGCCATGTaGAGGACCACACTGCGCGGC +
Preference number: 2 (lower is better)
Translates to: AAGCADGQDHVRTVPSEPRRSAM*RTTLRG
Trigger: GCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCG...AGGCTCTGACGGCACAGTTCGAACGTGGTCTTGACCGTCAGCACATCCCGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR-3UTR GCA 90 bp TCTTGCTACAGCCCAGATTCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGGTGCACAGCCAGGCATaGCAGCTGCTGCAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: SCYSPDSTPAKGKPGAERVHSQA*QLLQWG
Trigger: GCCCCACTGCAGCAGCTGGCATGCCTGGCTGTGCAC...CCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGAATCTGGGCTGTAGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
3UTR-3UTR CCA 90 bp ACAGCCCAGATTCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGTGAGGGGCACTGGCACAGGCACTaGATCTGTGTAAGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: TAQIPHQPKASQEQRGEGHWHRH*ICVSLE
Trigger: CTCCAGGCTTACACAGATCCAGTGCCTGTGCCAGTG...CCCCTCACCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGAATCTGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
3UTR-3UTR CCA 90 bp ATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCAAACCAATTTGTCGCCACTaGGATGGAAGCAGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: IAAGVPCAGPHCAAVSFKPICRH*DGSSSL
Trigger: CAGACTGCTGCTTCCATCCCAGTGGCGACAAATTGG...TTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR CAA 90 bp CAGTCTGAAAGCCAGTCAGTGTGGCCAAATCCCGTGAGAAGCACATaGCATTTTGGAAGGCCCAACACCTTCCAGAGTCGGTCCTCGCCA +
Preference number: 2 (lower is better)
Translates to: QSESQSVWPNPVRST*HFGRPNTFQSRSSP
Trigger: TGGCGAGGACCGACTCTGGAAGGTGTTGGGCCTTCCAAAATGCAATGTGCTTCTCACGGGATTTGGCCACACTGACTGGCTTTCAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CCA 90 bp GCAGCGGGATGTGCTGACGGTCAAGACCACGTTCGAACTGTGCCGTCAGAGCCTGGAGACACAGCTCACTaGAAGTTCATGGAGTCTAAA +
Preference number: 2 (lower is better)
Translates to: AAGCADGQDHVRTVPSEPGDTAH*KFMESK
Trigger: TTTAGACTCCATGAACTTCCAGTGAGCTGTGTCTCC...AGGCTCTGACGGCACAGTTCGAACGTGGTCTTGACCGTCAGCACATCCCGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR CAA 90 bp AACACCTTCCAGAGTCGGTCCTCGCCACAGGAGACTAGGATGTCTTaGTGGGGTTGCATGGAGACACAGCTCACTGGAAGTTCATGGAGT +
Preference number: 2 (lower is better)
Translates to: NTFQSRSSPQETRMS*WGCMETQLTGSSWS
Trigger: ACTCCATGAACTTCCAGTGAGCTGTGTCTCCATGCAACCCCACAAAGACATCCTAGTCTCCTGTGGCGAGGACCGACTCTGGAAGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR TCA 90 bp ATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCAAATGTTCTTGGGCCATCTaGATTGCTTTTGCCAGATCT +
Preference number: 2 (lower is better)
Translates to: IAAGVPCAGPHCAAVSFKCSWAI*IAFARS
Trigger: AGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACA...TTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR TCA 90 bp TTAAAGGGAATGCCCTCTGCAGCGGGATGTGCTGACGGTCAAGACCACGTTCGAAGAATCTCCCCGTCGTaGGAAAACACAACCGTGTGT +
Preference number: 2 (lower is better)
Translates to: LKGMPSAAGCADGQDHVRRISPS*ENTTVC
Trigger: ACACACGGTTGTGTTTTCTCACGACGGGGAGATTCT...TCGAACGTGGTCTTGACCGTCAGCACATCCCGCTGCAGAGGGCATTCCCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR-3UTR TCA 90 bp AAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCATGCTTCAGTTATGGTaGCCTCTGAATATCTTGTCA +
Preference number: 2 (lower is better)
Translates to: KIAAGVPCAGPHCAAVSFMLQLW*PLNILS
Trigger: TGACAAGATATTCAGAGGTCACCATAACTGAAGCAT...GAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR-3UTR TCA 90 bp AAGCAGCAGTCTGAAAGCCAGTCAGTGTGGCCAAATCCCGTGAGAAGCACATTGTCACGAAGACCTTTCTaGGTAGGACCTTCTGGTGCA +
Preference number: 2 (lower is better)
Translates to: KQQSESQSVWPNPVRSTLSRRPF*VGPSGA
Trigger: TGCACCAGAAGGTCCTACTCAGAAAGGTCTTCGTGA...CAATGTGCTTCTCACGGGATTTGGCCACACTGACTGGCTTTCAGACTGCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CCA 90 bp TTAAAGGGAATGCCCTCTGCAGCGGGATGTGCTGACGGTCAAGACCACGTTCGACTGGGTGTAGACATCTaGAACATTCCCAACAGTTCT +
Preference number: 2 (lower is better)
Translates to: LKGMPSAAGCADGQDHVRLGVDI*NIPNSS
Trigger: AGAACTGTTGGGAATGTTCCAGATGTCTACACCCAG...TCGAACGTGGTCTTGACCGTCAGCACATCCCGCTGCAGAGGGCATTCCCTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR-3UTR TCA 90 bp AGCTCTCTTCTCTGGTGTCTTTCCCTACAGATTCCAGTGGCTTCAAAAGCTGTGGACCCAAAGCCATGGTaGTGGCAGAGCTCACCTTAT +
Preference number: 2 (lower is better)
Translates to: SSLLWCLSLQIPVASKAVDPKPW*WQSSPY
Trigger: ATAAGGTGAGCTCTGCCATCACCATGGCTTTGGGTC...CACAGCTTTTGAAGCCACTGGAATCTGTAGGGAAAGACACCAGAGAAGAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR-3UTR GCA 90 bp GTGAGGAGGAAGCCACAAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCATCTGAATTGCTTTTaGCAGATCTTCTTCACCTTC +
Preference number: 2 (lower is better)
Translates to: VRRKPQNCRRSAMCRTTLHLNCF*QIFFTF
Trigger: GAAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATG...CAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTTGTGGCTTCCTCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR GCA 90 bp AAGCAGCAGTCTGAAAGCCAGTCAGTGTGGCCAAATCCCGTGAGAAGCACATTGATGTCTTTGTGGGGTTaGATGGAGACACAGCTCACT +
Preference number: 2 (lower is better)
Translates to: KQQSESQSVWPNPVRSTLMSLWG*METQLT
Trigger: AGTGAGCTGTGTCTCCATGCAACCCCACAAAGACAT...CAATGTGCTTCTCACGGGATTTGGCCACACTGACTGGCTTTCAGACTGCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CCA 90 bp GTGCAGGACCACACTGCGCGGCTGTGTCCTTCAAAGGTCAAAATGCAATCGCCTAGTTCTTTGCTGGTTTaGGACTACAGGAGGCATTTT +
Preference number: 2 (lower is better)
Translates to: VQDHTARLCPSKVKMQSPSSLLV*DYRRHF
Trigger: AAAATGCCTCCTGTAGTCCCAAACCAGCAAAGAACT...AGGCGATTGCATTTTGACCTTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR-3UTR CCA 90 bp TCCAGAGTCGGTCCTCGCCACAGGAGACTAGGATGTCTTTGTGGGGTTGCATGGATTTGTTTTGTTCCCTaGCTTCACGAAGACCTTTCT +
Preference number: 2 (lower is better)
Translates to: SRVGPRHRRLGCLCGVAWICFVP*LHEDLS
Trigger: AGAAAGGTCTTCGTGAAGCCAGGGAACAAAACAAAT...CCATGCAACCCCACAAAGACATCCTAGTCTCCTGTGGCGAGGACCGACTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CCA 90 bp AAGCAGCAGTCTGAAAGCCAGTCAGTGTGGCCAAATCCCGTGAGAAGCACATTGACTAGGATGTCTTTGTaGGGTTGCATGGAGACACAG +
Preference number: 2 (lower is better)
Translates to: KQQSESQSVWPNPVRSTLTRMSL*GCMETQ
Trigger: CTGTGTCTCCATGCAACCCCACAAAGACATCCTAGT...CAATGTGCTTCTCACGGGATTTGGCCACACTGACTGGCTTTCAGACTGCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CCA 90 bp ATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCAAACTCACTGGAAGTTCATaGAGTCTAAAAATGTTTTTC +
Preference number: 2 (lower is better)
Translates to: IAAGVPCAGPHCAAVSFKLTGSS*SLKMFF
Trigger: GAAAAACATTTTTAGACTCCATGAACTTCCAGTGAG...TTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CCA 90 bp CATATACCTGTTCTTGCATCCCATATAGACAGGGTCTTGTCTGCAGAGCTTGTGTTGTCGCCACTGGGATaGAAGCAGCAGTCTGAAAGC +
Preference number: 2 (lower is better)
Translates to: HIPVLASHIDRVLSAELVLSPLG*KQQSES
Trigger: GCTTTCAGACTGCTGCTTCCATCCCAGTGGCGACAA...CACAAGCTCTGCAGACAAGACCCTGTCTATATGGGATGCAAGAACAGGTATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR CAA 90 bp CCTCACATAGGCACACAGTGCTTATCTGGCGTGGGTATTGACTACTaGGCCTTGATGGTGGAGGATGTAATGATGGGTAACATTTCCTAC +
Preference number: 2 (lower is better)
Translates to: PHIGTQCLSGVGIDY*ALMVEDVMMGNISY
Trigger: GTAGGAAATGTTACCCATCATTACATCCTCCACCATCAAGGCCAAGTAGTCAATACCCACGCCAGATAAGCACTGTGTGCCTATGTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR-3UTR TCA 90 bp GTGCAGGACCACACTGCGCGGCTGTGTCCTTCAAAGGTCAAAATGCAATCGCCTTGGTCATTCCCATTTTaGTCAAGAAATTGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: VQDHTARLCPSKVKMQSPWSFPF*SRNCRE
Trigger: TTCTCTGCAATTTCTTGATCAAAATGGGAATGACCA...AGGCGATTGCATTTTGACCTTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR-3UTR TCA 90 bp CATGGCCAGATTTGCAATGTTTCGCATCACTACTTAACTTCTACAATCTCTGGCAACTCCCTCACAAACTaGGCCACTCCTCATTGCAGC +
Preference number: 2 (lower is better)
Translates to: HGQICNVSHHYLTSTISGNSLTN*ATPHCS
Trigger: GCTGCAATGAGGAGTGGCTCAGTTTGTGAGGGAGTT...GCCAGAGATTGTAGAAGTTAAGTAGTGATGCGAAACATTGCAAATCTGGCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR-3UTR CCA 90 bp ACACCTTCCAGAGTCGGTCCTCGCCACAGGAGACTAGGATGTCTTTGTGGGGTTTTGGTTGCATATCTATaGGAAATTCTGAATCCTTTG +
Preference number: 2 (lower is better)
Translates to: TPSRVGPRHRRLGCLCGVLVAYL*EILNPL
Trigger: CAAAGGATTCAGAATTTCCCATAGATATGCAACCAA...AACCCCACAAAGACATCCTAGTCTCCTGTGGCGAGGACCGACTCTGGAAGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR GCA 90 bp GGACTTGGACCTATATCGATGGACACAATTGGTAACAGCTTCCGAAAGTCCCACTCTAGCTTTGTCAGCTaGTTGTTTGTAGTGCTTCAA +
Preference number: 2 (lower is better)
Translates to: GLGPISMDTIGNSFRKSHSSFVS*LFVVLQ
Trigger: TTGAAGCACTACAAACAAGCAGCTGACAAAGCTAGA...GTGGGACTTTCGGAAGCTGTTACCAATTGTGTCCATCGATATAGGTCCAAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR-3UTR GCA 90 bp GGACTTGGACCTATATCGATGGACACAATTGGTAACAGCTTCCGAAAGTCCCACACATATACCTGTTCTTaGATCCCATATAGACAGGGT +
Preference number: 2 (lower is better)
Translates to: GLGPISMDTIGNSFRKSHTYTCS*IPYRQG
Trigger: ACCCTGTCTATATGGGATGCAAGAACAGGTATATGT...GTGGGACTTTCGGAAGCTGTTACCAATTGTGTCCATCGATATAGGTCCAAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR CAA 90 bp ATAGGCACACAGTGCTTATCTGGCGTGGGTATTGACTACTTGGCCTaGATGGTGGAGGATGTAATGATGGGTAACATTTCCTACTATTTT +
Preference number: 2 (lower is better)
Translates to: IGTQCLSGVGIDYLA*MVEDVMMGNISYYF
Trigger: AAAATAGTAGGAAATGTTACCCATCATTACATCCTCCACCATCAAGGCCAAGTAGTCAATACCCACGCCAGATAAGCACTGTGTGCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR CAA 90 bp CTAAAACTCGACCTGATGAATCAAAATTCACCTCATTGCCAGGACTaGGACCTATATCGATGGACACAATTGGTAACAGCTTCCGAAAGT +
Preference number: 2 (lower is better)
Translates to: LKLDLMNQNSPHCQD*DLYRWTQLVTASES
Trigger: ACTTTCGGAAGCTGTTACCAATTGTGTCCATCGATATAGGTCCAAGTCCTGGCAATGAGGTGAATTTTGATTCATCAGGTCGAGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR-3UTR CCA 90 bp TCACATATACCTGTTCTTGCATCCCATATAGACAGGGTCTTGTCTGCAGAGCTTTCCTTCAGTAAAGTGTaGTGTTTCTCATGTAACACC +
Preference number: 2 (lower is better)
Translates to: SHIPVLASHIDRVLSAELSFSKV*CFSCNT
Trigger: GGTGTTACATGAGAAACACCACACTTTACTGAAGGA...AAGCTCTGCAGACAAGACCCTGTCTATATGGGATGCAAGAACAGGTATATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR CAA 90 bp AAATCTTCTCTAGCTTTGCAAAATTTCAGTATCTGTAGCCTGTTCTaGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCACCTTCTGG +
Preference number: 2 (lower is better)
Translates to: KSSLALQNFSICSLF*GHLNCFCQIFFTFW
Trigger: CCAGAAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACTGAAATTTTGCAAAGCTAGAGAAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR CAA 90 bp ACGTGGTATTTTCTGATGAATCAAAATTCACCTCATTGCCAGGACTaGGACCTATATCGATGGACACAATTGGTAACAGCTTCCGAAAGT +
Preference number: 2 (lower is better)
Translates to: TWYFLMNQNSPHCQD*DLYRWTQLVTASES
Trigger: ACTTTCGGAAGCTGTTACCAATTGTGTCCATCGATATAGGTCCAAGTCCTGGCAATGAGGTGAATTTTGATTCATCAGAAAATACCACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR-3UTR CCA 90 bp CATATACCTGTTCTTGCATCCCATATAGACAGGGTCTTGTCTGCAGAGCTTGTGATTCAGGTTTGGATTTaGTTGCATATCTATGGGAAA +
Preference number: 2 (lower is better)
Translates to: HIPVLASHIDRVLSAELVIQVWI*LHIYGK
Trigger: TTTCCCATAGATATGCAACCAAATCCAAACCTGAAT...CACAAGCTCTGCAGACAAGACCCTGTCTATATGGGATGCAAGAACAGGTATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR GCA 90 bp GAATGCTGTGTAAGCTTTGTTCCTGGTTTTATAAGGCGGATATGGGATGCTGAATTATCAGGATTGTCATaGTCTTATTGGCTTCCATCT +
Preference number: 2 (lower is better)
Translates to: ECCVSFVPGFIRRIWDAELSGLS*SYWLPS
Trigger: AGATGGAAGCCAATAAGAGCATGACAATCCTGATAA...TTCAGCATCCCATATCCGCCTTATAAAACCAGGAACAAAGCTTACACAGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR-3UTR CCA 90 bp AATGCATGTGACCATAAAGTGACTGCTCACATATACCTGTTCTTGCATCCCATATCCTTCAGTAAAGTGTaGTGTTTCTCATGTAACACC +
Preference number: 2 (lower is better)
Translates to: NACDHKVTAHIYLFLHPISFSKV*CFSCNT
Trigger: GGTGTTACATGAGAAACACCACACTTTACTGAAGGA...TATGGGATGCAAGAACAGGTATATGTGAGCAGTCACTTTATGGTCACATGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CCA 90 bp CTACTTAAGGGTAGGTTTCCATTTATTGCTTGTTGTCTTGATTATGGGTCACATCCACAAAGCTCAGTTTaGAACTTTCCACAGACCCAA +
Preference number: 2 (lower is better)
Translates to: LLKGRFPFIACCLDYGSHPQSSV*NFPQTQ
Trigger: TTGGGTCTGTGGAAAGTTCCAAACTGAGCTTTGTGG...ATGTGACCCATAATCAAGACAACAAGCAATAAATGGAAACCTACCCTTAAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR-3UTR TCA 90 bp CACAGAATCTGTATGTCCATACAAAGTACATCTGCATCTTTCACTATTAACATCTGTTCTTGGGCCATCTaGATTGCTTTTGCCAGATCT +
Preference number: 2 (lower is better)
Translates to: HRICMSIQSTSASFTINICSWAI*IAFARS
Trigger: AGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACA...GATGTTAATAGTGAAAGATGCAGATGTACTTTGTATGGACATACAGATTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CCA 90 bp CTACTTAAGGGTAGGTTTCCATTTATTGCTTGTTGTCTTGATTATGGGTCACATTTGTCATGCTCTTATTaGCTTCCATCTCCACAAAGC +
Preference number: 2 (lower is better)
Translates to: LLKGRFPFIACCLDYGSHLSCSY*LPSPQS
Trigger: GCTTTGTGGAGATGGAAGCCAATAAGAGCATGACAA...ATGTGACCCATAATCAAGACAACAAGCAATAAATGGAAACCTACCCTTAAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR-3UTR TCA 90 bp TTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATTCATACCATTCAGACTaGAAGCAATCAAGAGTTCTG +
Preference number: 2 (lower is better)
Translates to: FLDYSLMMHSMKITFFLNSYHSD*KQSRVL
Trigger: CAGAACTCTTGATTGCTTTCAGTCTGAATGGTATGA...ATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR-3UTR CCA 90 bp AGCATTTTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTATAGTCGCTAAAATTGTCATCTaGTATCATGTCATTCTGAAG +
Preference number: 2 (lower is better)
Translates to: SIFSFSKVWCFSCNTLIVAKIVI*YHVILK
Trigger: CTTCAGAATGACATGATACCAGATGACAATTTTAGC...GACTATAAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAAAATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR-3UTR CCA 90 bp CACAGAATCTGTATGTCCATACAAAGTACATCTGCATCTTTCACTATTAACATCATTTGTTTTGTTCCCTaGCTTCACGAAGACCTTTCT +
Preference number: 2 (lower is better)
Translates to: HRICMSIQSTSASFTINIICFVP*LHEDLS
Trigger: AGAAAGGTCTTCGTGAAGCCAGGGAACAAAACAAAT...GATGTTAATAGTGAAAGATGCAGATGTACTTTGTATGGACATACAGATTCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CCA 90 bp CACAGAATCTGTATGTCCATACAAAGTACATCTGCATCTTTCACTATTAACATCCTCACTGGAAGTTCATaGAGTCTAAAAATGTTTTTC +
Preference number: 2 (lower is better)
Translates to: HRICMSIQSTSASFTINILTGSS*SLKMFF
Trigger: GAAAAACATTTTTAGACTCCATGAACTTCCAGTGAG...GATGTTAATAGTGAAAGATGCAGATGTACTTTGTATGGACATACAGATTCTGTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR TCA 72 bp AGCCAGGAGCAGAGAGGTGAGGGGTGTGTGAGCAAGTaGGAACCAGGTCCAGCCACTGTGCACAGCCAGGCA +
Preference number: 3 (lower is better)
Translates to: SQEQRGEGCVSK*EPGPATVHSQA
Trigger: TGCCTGGCTGTGCACAGTGGCTGGACCTGGTTCTCACTTGCTCACACACCCCTCACCTCTCTGCTCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
3UTR TCA 72 bp TCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGTaGGGGGTGTGTGAGCAAGTGAGAACCAGGTCCAGC +
Preference number: 3 (lower is better)
Translates to: STPAKGKPGAER*GVCEQVRTRSS
Trigger: GCTGGACCTGGTTCTCACTTGCTCACACACCCCTCACCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447990.1
3UTR TCA 72 bp CAAAGGCAAGCCAGGAGCAGAGAGGTGAGGGGTGTGTaGGCAAGTGAGAACCAGGTCCAGCCACTGTGCACA +
Preference number: 3 (lower is better)
Translates to: QRQARSREVRGV*ASENQVQPLCT
Trigger: TGTGCACAGTGGCTGGACCTGGTTCTCACTTGCTCACACACCCCTCACCTCTCTGCTCCTGGCTTGCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
3UTR GCA 72 bp AGGAGGAAGCCACAAAATTGCCGCAGGAGTGCCATGTaGAGGACCACACTGCGCGGCTGTGTCCTTCAAAGG +
Preference number: 3 (lower is better)
Translates to: RRKPQNCRRSAM*RTTLRGCVLQR
Trigger: CCTTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTTGTGGCTTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR TCA 72 bp AGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTGCTaGCGGTCAAGACCACGTTCGAACTGTGCCGTCAGA +
Preference number: 3 (lower is better)
Translates to: SLKGNALCSGMC*RSRPRSNCAVR
Trigger: TCTGACGGCACAGTTCGAACGTGGTCTTGACCGTCAGCACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR TCA 72 bp TGTCCTCTATCCCTGTCTCCAGCTCCAGTGCAGCTCTaGCAGTGCTCCATCCTTGTCAAAAGGACTGCAGGG +
Preference number: 3 (lower is better)
Translates to: CPLSLSPAPVQL*QCSILVKRTAG
Trigger: CCCTGCAGTCCTTTTGACAAGGATGGAGCACTGTCAGAGCTGCACTGGAGCTGGAGACAGGGATAGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR TCA 72 bp AGCCAATTTGTCGCCACTGGGATGGAAGCAGCAGTCTaGAAGCCAGTCAGTGTGGCCAAATCCCGTGAGAAG +
Preference number: 3 (lower is better)
Translates to: SQFVATGMEAAV*KPVSVAKSREK
Trigger: CTTCTCACGGGATTTGGCCACACTGACTGGCTTTCAGACTGCTGCTTCCATCCCAGTGGCGACAAATTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR CCA 72 bp AGTCGGTCCTCGCCACAGGAGACTAGGATGTCTTTGTaGGGTTGCATGGAGACACAGCTCACTGGAAGTTCA +
Preference number: 3 (lower is better)
Translates to: SRSSPQETRMSL*GCMETQLTGSS
Trigger: TGAACTTCCAGTGAGCTGTGTCTCCATGCAACCCCACAAAGACATCCTAGTCTCCTGTGGCGAGGACCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR GCA 72 bp TCCTCGCCACAGGAGACTAGGATGTCTTTGTGGGGTTaGATGGAGACACAGCTCACTGGAAGTTCATGGAGT +
Preference number: 3 (lower is better)
Translates to: SSPQETRMSLWG*METQLTGSSWS
Trigger: ACTCCATGAACTTCCAGTGAGCTGTGTCTCCATGCAACCCCACAAAGACATCCTAGTCTCCTGTGGCGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR GCA 72 bp AAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTaGGCGGCTGTGTCCTTCAAAGGTCAAAATGCAATC +
Preference number: 3 (lower is better)
Translates to: KIAAGVPCAGPH*AAVSFKGQNAI
Trigger: GATTGCATTTTGACCTTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CAA 90 bp GCAGCGGGATGTGCTGACGGTCAAGACCACGTTCGAACTGTGCCGTCAGAGCCTAAATTCAGGATTAGTTaGTGGGCAACTGCTTTTATC +
Preference number: 3 (lower is better)
Translates to: AAGCADGQDHVRTVPSEPKFRIS*WATAFI
Trigger: GATAAAAGCAGTTGCCCACAAACTAATCCTGAATTT...AGGCTCTGACGGCACAGTTCGAACGTGGTCTTGACCGTCAGCACATCCCGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR-3UTR CAA 90 bp GTGCAGGACCACACTGCGCGGCTGTGTCCTTCAAAGGTCAAAATGCAATCGCCTATCTGTAGCCTGTTCTaGGGCCATCTGAATTGCTTT +
Preference number: 3 (lower is better)
Translates to: VQDHTARLCPSKVKMQSPICSLF*GHLNCF
Trigger: AAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT...AGGCGATTGCATTTTGACCTTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CAA 90 bp AAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCCAGGTTTGGATTTGGTaGCATATCTATGGGAAATTC +
Preference number: 3 (lower is better)
Translates to: KIAAGVPCAGPHCAAVSFQVWIW*HIYGKF
Trigger: GAATTTCCCATAGATATGCAACCAAATCCAAACCTG...GAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR TCA 72 bp AGCAGTCTGAAAGCCAGTCAGTGTGGCCAAATCCCGTaGGAAGCACATTGCATTTTGGAAGGCCCAACACCT +
Preference number: 3 (lower is better)
Translates to: SSLKASQCGQIP*EAHCILEGPTP
Trigger: AGGTGTTGGGCCTTCCAAAATGCAATGTGCTTCTCACGGGATTTGGCCACACTGACTGGCTTTCAGACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR GCA 72 bp CTGCAAGCTCCGCCTCTCAGGTTCAAGCAATTCTCCTaGCTCAGCTTTTCGAATAACTGGGAACTACAGTCG +
Preference number: 3 (lower is better)
Translates to: LQAPPLRFKQFS*LSFSNNWELQS
Trigger: CGACTGTAGTTCCCAGTTATTCGAAAAGCTGAGGCAGGAGAATTGCTTGAACCTGAGAGGCGGAGCTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR CCA 72 bp CTGGGATGGAAGCAGCAGTCTGAAAGCCAGTCAGTGTaGCCAAATCCCGTGAGAAGCACATTGCATTTTGGA +
Preference number: 3 (lower is better)
Translates to: LGWKQQSESQSV*PNPVRSTLHFG
Trigger: TCCAAAATGCAATGTGCTTCTCACGGGATTTGGCCACACTGACTGGCTTTCAGACTGCTGCTTCCATCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CAA 90 bp AGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTGCTGACAGCTTTGTCAGCTGCTaGTTTGTAGTGCTTCAAATC +
Preference number: 3 (lower is better)
Translates to: RRHFQALKGMPSAAGCADSFVSC*FVVLQI
Trigger: GATTTGAAGCACTACAAACAAGCAGCTGACAAAGCT...GTCAGCACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR CCA 72 bp TGCTCTTATTGGCTTCCATCTCCACAAAGCTCAGTTTaGAACTTTCCACAGACCCAAAGCCATGGTGATGGC +
Preference number: 3 (lower is better)
Translates to: CSYWLPSPQSSV*NFPQTQSHGDG
Trigger: GCCATCACCATGGCTTTGGGTCTGTGGAAAGTTCCAAACTGAGCTTTGTGGAGATGGAAGCCAATAAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR-3UTR CAA 90 bp CAGCTTTGTAACCCCACAGGCATCACAGGATGCTATCATGTGACCCCTGGGATCTTTCTTCAATGTTTCTaGAAGTCCAGAAATCTGCCC +
Preference number: 3 (lower is better)
Translates to: QLCNPTGITGCYHVTPGIFLQCF*KSRNLP
Trigger: GGGCAGATTTCTGGACTTCAAGAAACATTGAAGAAA...GATCCCAGGGGTCACATGATAGCATCCTGTGATGCCTGTGGGGTTACAAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CAA 90 bp CATGGCCAGATTTGCAATGTTTCGCATCACTACTTAACTTCTACAATCTCTGGCCTGAGCCACTCCTCATaGCAGCTCTCTTCTCTGGTG +
Preference number: 3 (lower is better)
Translates to: HGQICNVSHHYLTSTISGLSHSS*QLSSLV
Trigger: CACCAGAGAAGAGAGCTGCAATGAGGAGTGGCTCAG...GCCAGAGATTGTAGAAGTTAAGTAGTGATGCGAAACATTGCAAATCTGGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR-3UTR CAA 90 bp TCACATATACCTGTTCTTGCATCCCATATAGACAGGGTCTTGTCTGCAGAGCTTGAGACTAGGATGTCTTaGTGGGGTTGCATGGAGACA +
Preference number: 3 (lower is better)
Translates to: SHIPVLASHIDRVLSAELETRMS*WGCMET
Trigger: TGTCTCCATGCAACCCCACAAAGACATCCTAGTCTC...AAGCTCTGCAGACAAGACCCTGTCTATATGGGATGCAAGAACAGGTATATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR TCA 72 bp TCACATAGGCACACAGTGCTTATCTGGCGTGGGTATTaGCTACTTGGCCTTGATGGTGGAGGATGTAATGAT +
Preference number: 3 (lower is better)
Translates to: SHRHTVLIWRGY*LLGLDGGGCND
Trigger: ATCATTACATCCTCCACCATCAAGGCCAAGTAGTCAATACCCACGCCAGATAAGCACTGTGTGCCTATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR-3UTR CAA 90 bp CCTGAGCTAAAACTCGACCTGATGAATCAAAATTCACCTCATTGCCAGGACTTGCAGTTCTTTGCTGGTTaGGGACTACAGGAGGCATTT +
Preference number: 3 (lower is better)
Translates to: PELKLDLMNQNSPHCQDLQFFAG*GLQEAF
Trigger: AAATGCCTCCTGTAGTCCCAAACCAGCAAAGAACTG...CAAGTCCTGGCAATGAGGTGAATTTTGATTCATCAGGTCGAGTTTTAGCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR TCA 72 bp TGGGATGCTGAATGTTACTGTGTTGTTAACAAGGTGTaGAAGAGGTCTTTCCACCCAGGCATGGCCAGATTT +
Preference number: 3 (lower is better)
Translates to: WDAECYCVVNKV*KRSFHPGMARF
Trigger: AAATCTGGCCATGCCTGGGTGGAAAGACCTCTTTCACACCTTGTTAACAACACAGTAACATTCAGCATCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR GCA 72 bp TTCAGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTaGTTTTGCCAGATCTTCTTCACCTTCTGGGATGCT +
Preference number: 3 (lower is better)
Translates to: FSICSLFLGHLN*FCQIFFTFWDA
Trigger: AGCATCCCAGAAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000420497.6
ENST00000452556.5
3UTR CCA 72 bp TACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTaGGACTACAGGAGGCATTTTCAAGCCTTAAAGGGA +
Preference number: 3 (lower is better)
Translates to: YLLAHLTSSLLV*DYRRHFQALKG
Trigger: TCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTCCCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
3UTR CCA 72 bp AATTCACCTCATTGCCAGGACTTGGACCTATATCGATaGACACAATTGGTAACAGCTTCCGAAAGTCCCACA +
Preference number: 3 (lower is better)
Translates to: NSPHCQDLDLYR*TQLVTASESPT
Trigger: TGTGGGACTTTCGGAAGCTGTTACCAATTGTGTCCATCGATATAGGTCCAAGTCCTGGCAATGAGGTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CAA 90 bp GGACTTGGACCTATATCGATGGACACAATTGGTAACAGCTTCCGAAAGTCCCACCATTCAGGTTTGGATTaGGTTGCATATCTATGGGAA +
Preference number: 3 (lower is better)
Translates to: GLGPISMDTIGNSFRKSHHSGLD*VAYLWE
Trigger: TTCCCATAGATATGCAACCAAATCCAAACCTGAATG...GTGGGACTTTCGGAAGCTGTTACCAATTGTGTCCATCGATATAGGTCCAAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CAA 90 bp GAATGCTGTGTAAGCTTTGTTCCTGGTTTTATAAGGCGGATATGGGATGCTGAATCCACAAAGCTCAGTTaGGAACTTTCCACAGACCCA +
Preference number: 3 (lower is better)
Translates to: ECCVSFVPGFIRRIWDAESTKLS*ELSTDP
Trigger: TGGGTCTGTGGAAAGTTCCAAACTGAGCTTTGTGGA...TTCAGCATCCCATATCCGCCTTATAAAACCAGGAACAAAGCTTACACAGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR TCA 72 bp ACCGTGTGTGCCTCGTTTTCGTGGCCCATCAATTTGTaGATCTCCCCAGATTTAAGATCTAGCAAATGGATA +
Preference number: 3 (lower is better)
Translates to: TVCASFSWPINL*ISPDLRSSKWI
Trigger: TATCCATTTGCTAGATCTTAAATCTGGGGAGATTCACAAATTGATGGGCCACGAAAACGAGGCACACACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR TCA 72 bp CTCAGTTTGGAACTTTCCACAGACCCAAAGCCATGGTaGTGGCAGAGCTCACCTTATAAATTTTCCTTCTGT +
Preference number: 3 (lower is better)
Translates to: LSLELSTDPKPW*WQSSPYKFSFC
Trigger: ACAGAAGGAAAATTTATAAGGTGAGCTCTGCCATCACCATGGCTTTGGGTCTGTGGAAAGTTCCAAACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR GCA 72 bp GTGAAAGAGGTCTTTCCACCCAGGCATGGCCAGATTTaGAATGTTTCGCATCACTACTTAACTTCTACAATC +
Preference number: 3 (lower is better)
Translates to: VKEVFPPRHGQI*NVSHHYLTSTI
Trigger: GATTGTAGAAGTTAAGTAGTGATGCGAAACATTGCAAATCTGGCCATGCCTGGGTGGAAAGACCTCTTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR-3UTR CAA 90 bp CATATACCTGTTCTTGCATCCCATATAGACAGGGTCTTGTCTGCAGAGCTTGTGTGTTTTACATTTGTTTaGTTCCCTGGCTTCACGAAG +
Preference number: 3 (lower is better)
Translates to: HIPVLASHIDRVLSAELVCFTFV*FPGFTK
Trigger: CTTCGTGAAGCCAGGGAACAAAACAAATGTAAAACA...CACAAGCTCTGCAGACAAGACCCTGTCTATATGGGATGCAAGAACAGGTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CAA 90 bp GGACTTGGACCTATATCGATGGACACAATTGGTAACAGCTTCCGAAAGTCCCACGCTTGTAGTCAAATTTaGCTGGAGAAAGACTTTCTT +
Preference number: 3 (lower is better)
Translates to: GLGPISMDTIGNSFRKSHACSQI*LEKDFL
Trigger: AAGAAAGTCTTTCTCCAGCAAAATTTGACTACAAGC...GTGGGACTTTCGGAAGCTGTTACCAATTGTGTCCATCGATATAGGTCCAAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CAA 90 bp TCAAATAGGAGTTTTATGGTGAACAGCCAAGTGTGGCAATTGAATGCCAGTTTTGAAGCACATTGCATTTaGGAAGGCCCAACACCTTCC +
Preference number: 3 (lower is better)
Translates to: SNRSFMVNSQVWQLNASFEAHCI*EGPTPS
Trigger: GGAAGGTGTTGGGCCTTCCAAAATGCAATGTGCTTC...AAAACTGGCATTCAATTGCCACACTTGGCTGTTCACCATAAAACTCCTATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR-3UTR CAA 90 bp GTTCCTGGTTTTATAAGGCGGATATGGGATGCTGAATGTTACTGTGTTGTTAACCAGGCATGGCCAGATTaGCAATGTTTCGCATCACTA +
Preference number: 3 (lower is better)
Translates to: VPGFIRRIWDAECYCVVNQAWPD*QCFASL
Trigger: TAGTGATGCGAAACATTGCAAATCTGGCCATGCCTG...GTTAACAACACAGTAACATTCAGCATCCCATATCCGCCTTATAAAACCAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR TCA 72 bp GTCTTTCCCTACAGATTCCAGTGGCTTCAAAAGCTGTaGACTAGGGTCTCTGACATTTCCAATTATCAGGAT +
Preference number: 3 (lower is better)
Translates to: VFPYRFQWLQKL*TRVSDISNYQD
Trigger: ATCCTGATAATTGGAAATGTCAGAGACCCTAGTTCACAGCTTTTGAAGCCACTGGAATCTGTAGGGAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR-3UTR CAA 90 bp CATTCTTTAATGACCACCTCACATAGGCACACAGTGCTTATCTGGCGTGGGTATGCTTGTAGTCAAATTTaGCTGGAGAAAGACTTTCTT +
Preference number: 3 (lower is better)
Translates to: HSLMTTSHRHTVLIWRGYACSQI*LEKDFL
Trigger: AAGAAAGTCTTTCTCCAGCAAAATTTGACTACAAGC...ATACCCACGCCAGATAAGCACTGTGTGCCTATGTGAGGTGGTCATTAAAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR TCA 72 bp AGATCTAGCAAATGGATAACACCATTGCCACTTGCCTaGGCTAAAACTCGACCTGATGAATCAAAATTCACC +
Preference number: 3 (lower is better)
Translates to: RSSKWITPLPLA*AKTRPDESKFT
Trigger: GGTGAATTTTGATTCATCAGGTCGAGTTTTAGCTCAGGCAAGTGGCAATGGTGTTATCCATTTGCTAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR TCA 72 bp AATAGCCCCCAACAGAGGGATACATTTGTTAACAACTaGCGAACCTACATATCATTATCACCCAAAGTCCAC +
Preference number: 3 (lower is better)
Translates to: NSPQQRDTFVNN*RTYISLSPKVH
Trigger: GTGGACTTTGGGTGATAATGATATGTAGGTTCGTCAGTTGTTAACAAATGTATCCCTCTGTTGGGGGCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432529.6
3UTR GCA 72 bp CTAAAACTCGACCTGATGAATCAAAATTCACCTCATTaGCAGGACTTGGACCTATATCGATGGACACAATTG +
Preference number: 3 (lower is better)
Translates to: LKLDLMNQNSPH*QDLDLYRWTQL
Trigger: CAATTGTGTCCATCGATATAGGTCCAAGTCCTGGCAATGAGGTGAATTTTGATTCATCAGGTCGAGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR GCA 72 bp TTGGCTGATGACCCTAAAATCCTAGGCTTAATTTTATaGTTCGTTAGGGTGGATCCATGGAAAGCCCTAAAT +
Preference number: 3 (lower is better)
Translates to: LADDPKILGLIL*FVRVDPWKALN
Trigger: ATTTAGGGCTTTCCATGGATCCACCCTAACGAAGCATAAAATTAAGCCTAGGATTTTAGGGTCATCAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR-3UTR CAA 90 bp GCTGGAGAAAGACTTTCTTTAGAAACATTCAGGTTTGGATTTGGTTGCATATCTATCTGCCCAACTACTTaGTCTCTTTCCAAGGAGGTC +
Preference number: 3 (lower is better)
Translates to: AGERLSLETFRFGFGCISICPTT*SLSKEV
Trigger: GACCTCCTTGGAAAGAGACAAAGTAGTTGGGCAGAT...AGATATGCAACCAAATCCAAACCTGAATGTTTCTAAAGAAAGTCTTTCTCCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CAA 90 bp TTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATCAGGTACTGCATGCTTaGAAGGAAGAACTGTTTTCC +
Preference number: 3 (lower is better)
Translates to: FLDYSLMMHSMKITFFLNQVLHA*KEELFS
Trigger: GGAAAACAGTTCTTCCTTCAAAGCATGCAGTACCTG...ATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR-3UTR CAA 90 bp GAATGCTGTGTAAGCTTTGTTCCTGGTTTTATAAGGCGGATATGGGATGCTGAAAAGTGTCAGGTAGTGTaGTTATGTATAGTATTGCAG +
Preference number: 3 (lower is better)
Translates to: ECCVSFVPGFIRRIWDAEKCQVV*LCIVLQ
Trigger: CTGCAATACTATACATAACAACACTACCTGACACTT...TTCAGCATCCCATATCCGCCTTATAAAACCAGGAACAAAGCTTACACAGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR GCA 72 bp GTTTTAAATTGCCACAGTAAAGCAGAAGCGTGCATATaGTTCCCAATTTATGCAGCTGACTTCAGGTACTTT +
Preference number: 3 (lower is better)
Translates to: VLNCHSKAEACI*FPIYAADFRYF
Trigger: AAAGTACCTGAAGTCAGCTGCATAAATTGGGAAGCATATGCACGCTTCTGCTTTACTGTGGCAATTTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR-3UTR CAA 90 bp TTTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAACCATCTGAATTGCTTTaGCCAGATCTTCTTCACCTT +
Preference number: 3 (lower is better)
Translates to: FPGLFAYDAFDENHVLSEPSELL*PDLLHL
Trigger: AAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATGG...TTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR-3UTR CAA 90 bp ACTATGATCAACTTTAATTTGAGGACCATGGTAACTATGTCCTCTTTGCAGTTTCTTGGGCCATCTGAATaGCTTTTGCCAGATCTTCTT +
Preference number: 3 (lower is better)
Translates to: TMINFNLRTMVTMSSLQFLGPSE*LLPDLL
Trigger: AAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAG...AAACTGCAAAGAGGACATAGTTACCATGGTCCTCAAATTAAAGTTGATCATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR GCA 72 bp TATATTGTTTTAAATTGCCACAGTAAAGCAGAAGCGTaGATATGCTTCCCAATTTATGCAGCTGACTTCAGG +
Preference number: 3 (lower is better)
Translates to: YIVLNCHSKAEA*ICFPIYAADFR
Trigger: CCTGAAGTCAGCTGCATAAATTGGGAAGCATATGCACGCTTCTGCTTTACTGTGGCAATTTAAAACAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR GCA 72 bp AATGTAGAAACATTCAGTCTTCTGAAGACAGTTTTGTaGTGCTTTGAGAATGCTGGATTAGAGGTGATATGG +
Preference number: 3 (lower is better)
Translates to: NVETFSLLKTVL*CFENAGLEVIW
Trigger: CCATATCACCTCTAATCCAGCATTCTCAAAGCAGCACAAAACTGTCTTCAGAAGACTGAATGTTTCTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR CCA 72 bp CTCATCATATGTATTCAGATTGTGCAGTCCTACCATTaGCAACTTCAATTTGAGGTAACATCAAGAAAGCTG +
Preference number: 3 (lower is better)
Translates to: LIICIQIVQSYH*QLQFEVTSRKL
Trigger: CAGCTTTCTTGATGTTACCTCAAATTGAAGTTGCCAATGGTAGGACTGCACAATCTGAATACATATGATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR TCA 72 bp GAGAAAGTCTTCTATTACTTCAGGTACTGCATGCTTTaGAGGAAGAACTGTTTTCCGTTCCAAAATTTCAGT +
Preference number: 3 (lower is better)
Translates to: EKVFYYFRYCML*RKNCFPFQNFS
Trigger: ACTGAAATTTTGGAACGGAAAACAGTTCTTCCTTCAAAGCATGCAGTACCTGAAGTAATAGAAGACTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR TCA 72 bp GAGCTGTCTGTTTTCTACTGCCTAAAAGTAGTTGTCTaGTCTTACAGCTTAGCTTTAGAGTTATTTACACAG +
Preference number: 3 (lower is better)
Translates to: ELSVFYCLKVVV*SYSLALELFTQ
Trigger: CTGTGTAAATAACTCTAAAGCTAAGCTGTAAGATCAGACAACTACTTTTAGGCAGTAGAAAACAGACAGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR-3UTR CAA 90 bp GACGAACCTACATATCATTATCACCCAAAGTCCACAGTTTATATTATTCCTTCTACCTGCATTCCCTTCTaGTTGGTAAGTTATAATTGT +
Preference number: 3 (lower is better)
Translates to: DEPTYHYHPKSTVYIIPSTCIPF*LVSYNC
Trigger: ACAATTATAACTTACCAACAAGAAGGGAATGCAGGT...AGAAGGAATAATATAAACTGTGGACTTTGGGTGATAATGATATGTAGGTTCGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432529.6
3UTR GCA 72 bp GAGTTTTATGGTGAACAGCCAAGTGTGGCAATTGAATaGCAGTTTTCAAATAATACATATCACATATCCTTT +
Preference number: 3 (lower is better)
Translates to: EFYGEQPSVAIE*QFSNNTYHISF
Trigger: AAAGGATATGTGATATGTATTATTTGAAAACTGGCATTCAATTGCCACACTTGGCTGTTCACCATAAAACTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CCA 90 bp TGCTGCAGTGGGGCAGGCAGCTCCAGGCACTGGCACAGGCACTGGATCTGTGTACCCTCACGGCGGAGCTaGGCATCCCTCGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: CCSGAGSSRHWHRHWICVPSRRS*ASLAEQ
Trigger: CTGCTCAGCGAGGGATGCCCAGCTCCGCCGTGAGGG...TACACAGATCCAGTGCCTGTGCCAGTGCCTGGAGCTGCCTGCCCCACTGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR TCA 90 bp AGTGGGGCAGGCAGCTCCAGGCACTGGCACAGGCACTGGATCTGTGTAAGCCTGCCAGGAGCAGAGAGGTaGGGGGTGTGTGAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SGAGSSRHWHRHWICVSLPGAER*GVCEQV
Trigger: CACTTGCTCACACACCCCTCACCTCTCTGCTCCTGG...CAGGCTTACACAGATCCAGTGCCTGTGCCAGTGCCTGGAGCTGCCTGCCCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CCA 90 bp TTTGGAAGGCCCAACACCTTCCAGAGTCGGTCCTCGCCACAGGAGACTAGGATGCCCTCACGGCGGAGCTaGGCATCCCTCGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: FGRPNTFQSRSSPQETRMPSRRS*ASLAEQ
Trigger: CTGCTCAGCGAGGGATGCCCAGCTCCGCCGTGAGGG...CATCCTAGTCTCCTGTGGCGAGGACCGACTCTGGAAGGTGTTGGGCCTTCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR TCA 90 bp TGCTGCAGTGGGGCAGGCAGCTCCAGGCACTGGCACAGGCACTGGATCTGTGTAGAGGTGAGGGGTGTGTaGGCAAGTGAGAACCAGGTC +
Preference number: 4 (lower is better)
Translates to: CCSGAGSSRHWHRHWICVEVRGV*ASENQV
Trigger: GACCTGGTTCTCACTTGCTCACACACCCCTCACCTC...TACACAGATCCAGTGCCTGTGCCAGTGCCTGGAGCTGCCTGCCCCACTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR GCA 90 bp TCTTGCTACAGCCCAGATTCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGCCTCGCGTCCCCGGCTaGCGTCAAACCCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: SCYSPDSTPAKGKPGAERPRVPG*RQTHAQ
Trigger: TTGGGCATGGGTTTGACGGCAGCCGGGGACGCGAGG...CCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGAATCTGGGCTGTAGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR GCA 90 bp CTTGCTACAGCCCAGATTCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGTGTGCACAGCCAGGCATaGCAGCTGCTGCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LATAQIPHQPKASQEQRGVHSQA*QLLQWG
Trigger: GCCCCACTGCAGCAGCTGGCATGCCTGGCTGTGCAC...ACCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGAATCTGGGCTGTAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR TCA 90 bp AGTGAGAACCAGGTCCAGCCACTGTGCACAGCCAGGCATGCCAGCTGCTGCAGTGGGTGTGTGAGCAAGTaGGAACCAGGTCCAGCCACT +
Preference number: 4 (lower is better)
Translates to: SENQVQPLCTARHASCCSGCVSK*EPGPAT
Trigger: AGTGGCTGGACCTGGTTCTCACTTGCTCACACACCC...ACTGCAGCAGCTGGCATGCCTGGCTGTGCACAGTGGCTGGACCTGGTTCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR GCA 90 bp TTAAAGGGAATGCCCTCTGCAGCGGGATGTGCTGACGGTCAAGACCACGTTCGACCTCGCGTCCCCGGCTaGCGTCAAACCCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: LKGMPSAAGCADGQDHVRPRVPG*RQTHAQ
Trigger: TTGGGCATGGGTTTGACGGCAGCCGGGGACGCGAGG...TCGAACGTGGTCTTGACCGTCAGCACATCCCGCTGCAGAGGGCATTCCCTTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR CCA 90 bp AGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTGCTGACCCCTCACGGCGGAGCTaGGCATCCCTCGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: RRHFQALKGMPSAAGCADPSRRS*ASLAEQ
Trigger: CTGCTCAGCGAGGGATGCCCAGCTCCGCCGTGAGGG...GTCAGCACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp AAGGTACAGAGATGTCCCATACACCTCCTACTCCCACACATGCACAGCCTTCCCCCCTCACGGCGGAGCTaGGCATCCCTCGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: KVQRCPIHLLLPHMHSLPPSRRS*ASLAEQ
Trigger: CTGCTCAGCGAGGGATGCCCAGCTCCGCCGTGAGGG...GGGAAGGCTGTGCATGTGTGGGAGTAGGAGGTGTATGGGACATCTCTGTACCTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR CCA 90 bp TGCTGCAGTGGGGCAGGCAGCTCCAGGCACTGGCACAGGCACTGGATCTGTGTACACTGGCACAGGCACTaGATCTGTGTAAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CCSGAGSSRHWHRHWICVHWHRH*ICVSLE
Trigger: CTCCAGGCTTACACAGATCCAGTGCCTGTGCCAGTG...TACACAGATCCAGTGCCTGTGCCAGTGCCTGGAGCTGCCTGCCCCACTGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR GCA 90 bp GGCAGGCAGCTCCAGGCACTGGCACAGGCACTGGATCTGTGTAAGCCTGGAGCTGCTGTGCTCAGCTCTTaGTACAGCCCAGATTCCACA +
Preference number: 4 (lower is better)
Translates to: GRQLQALAQALDLCKPGAAVLSS*YSPDST
Trigger: TGTGGAATCTGGGCTGTAGCAAGAGCTGAGCACAGC...AGCTCCAGGCTTACACAGATCCAGTGCCTGTGCCAGTGCCTGGAGCTGCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CCA 90 bp TCCCATACACCTCCTACTCCCACACATGCACAGCCTTCCCCATTATCAATAGCCCTGAGCAGCCATCTCTaGCGCTTCGGGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: SHTPPTPTHAQPSPLSIALSSHL*RFGPPP
Trigger: GGGTGGGGGCCCGAAGCGCCAGAGATGGCTGCTCAG...GGCTATTGATAATGGGGAAGGCTGTGCATGTGTGGGAGTAGGAGGTGTATGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR TCA 90 bp TGCTGCAGTGGGGCAGGCAGCTCCAGGCACTGGCACAGGCACTGGATCTGTGTATCACGAAGACCTTTCTaGGTAGGACCTTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: CCSGAGSSRHWHRHWICVSRRPF*VGPSGA
Trigger: TGCACCAGAAGGTCCTACTCAGAAAGGTCTTCGTGA...TACACAGATCCAGTGCCTGTGCCAGTGCCTGGAGCTGCCTGCCCCACTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR GCA 90 bp ATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCAAATGTGCAGGACCACACTaGGCGGCTGTGTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: IAAGVPCAGPHCAAVSFKCAGPH*AAVSFK
Trigger: TTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACA...TTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR GCA 90 bp GACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTCGCAGGAGTGCCATGTaGAGGACCACACTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: DYRRHFQALKGMPSAAGCRRSAM*RTTLRG
Trigger: GCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCG...ACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR TCA 90 bp GGCAGGCAGCTCCAGGCACTGGCACAGGCACTGGATCTGTGTAAGCCTGGAGCTATGCTTCAGTTATGGTaGCCTGTTCCAGGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: GRQLQALAQALDLCKPGAMLQLW*PVPGSR
Trigger: CCTACTACCTGGAACAGGTCACCATAACTGAAGCAT...AGCTCCAGGCTTACACAGATCCAGTGCCTGTGCCAGTGCCTGGAGCTGCCTGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CCA 90 bp ATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCAAATTGTCGCCACTGGGATaGAAGCAGCAGTCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: IAAGVPCAGPHCAAVSFKLSPLG*KQQSES
Trigger: GCTTTCAGACTGCTGCTTCCATCCCAGTGGCGACAA...TTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR TCA 90 bp GACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTTGCAGCGGGATGTGCTaGCGGTCAAGACCACGTTCG +
Preference number: 4 (lower is better)
Translates to: DYRRHFQALKGMPSAAGCCSGMC*RSRPRS
Trigger: CGAACGTGGTCTTGACCGTCAGCACATCCCGCTGCA...ACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR GCA 90 bp GCAGCGGGATGTGCTGACGGTCAAGACCACGTTCGAACTGTGCCGTCAGAGCCTAGACAGGGTCTTGTCTaGAGAGCTTGTGAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: AAGCADGQDHVRTVPSEPRQGLV*RACEKS
Trigger: ACTCTTCTCACAAGCTCTGCAGACAAGACCCTGTCT...AGGCTCTGACGGCACAGTTCGAACGTGGTCTTGACCGTCAGCACATCCCGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR GCA 90 bp AGTGGGGCAGGCAGCTCCAGGCACTGGCACAGGCACTGGATCTGTGTAAGCCTGTCAGTGGCGTCTGGATaGTTGGAAACATCTGAAACT +
Preference number: 4 (lower is better)
Translates to: SGAGSSRHWHRHWICVSLSVASG*LETSET
Trigger: AGTTTCAGATGTTTCCAAGCATCCAGACGCCACTGA...CAGGCTTACACAGATCCAGTGCCTGTGCCAGTGCCTGGAGCTGCCTGCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CCA 90 bp GGCAGGCAGCTCCAGGCACTGGCACAGGCACTGGATCTGTGTAAGCCTGGAGCTCTGGGTGTAGACATCTaGAACATTCCCAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: GRQLQALAQALDLCKPGALGVDI*NIPNSS
Trigger: AGAACTGTTGGGAATGTTCCAGATGTCTACACCCAG...AGCTCCAGGCTTACACAGATCCAGTGCCTGTGCCAGTGCCTGGAGCTGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CCA 90 bp TCCAGAGTCGGTCCTCGCCACAGGAGACTAGGATGTCTTTGTGGGGTTGCATGGCCAATTTGTCGCCACTaGGATGGAAGCAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: SRVGPRHRRLGCLCGVAWPICRH*DGSSSL
Trigger: CAGACTGCTGCTTCCATCCCAGTGGCGACAAATTGG...CCATGCAACCCCACAAAGACATCCTAGTCTCCTGTGGCGAGGACCGACTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp TTTGGAAGGCCCAACACCTTCCAGAGTCGGTCCTCGCCACAGGAGACTAGGATGCCAATTTGTCGCCACTaGGATGGAAGCAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: FGRPNTFQSRSSPQETRMPICRH*DGSSSL
Trigger: CAGACTGCTGCTTCCATCCCAGTGGCGACAAATTGG...CATCCTAGTCTCCTGTGGCGAGGACCGACTCTGGAAGGTGTTGGGCCTTCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp ACAGCCCAGATTCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGTGAGGGGTGGCGTCTGGATGCTTaGAAACATCTGAAACTGCAC +
Preference number: 4 (lower is better)
Translates to: TAQIPHQPKASQEQRGEGWRLDA*KHLKLH
Trigger: GTGCAGTTTCAGATGTTTCCAAGCATCCAGACGCCA...CCCCTCACCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGAATCTGGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
3UTR CAA 72 bp CAGAGTCGGTCCTCGCCACAGGAGACTAGGATGTCTTaGTGGGGTTGCATGGAGACACAGCTCACTGGAAGT +
Preference number: 4 (lower is better)
Translates to: QSRSSPQETRMS*WGCMETQLTGS
Trigger: ACTTCCAGTGAGCTGTGTCTCCATGCAACCCCACAAAGACATCCTAGTCTCCTGTGGCGAGGACCGACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR TCA 90 bp ACAGCCCAGATTCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGTGAGGGGTGTTCTTGGGCCATCTaGATTGCTTTTGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: TAQIPHQPKASQEQRGEGCSWAI*IAFARS
Trigger: AGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACA...CCCCTCACCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGAATCTGGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR TCA 90 bp ATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCAAATGTGGCCAAATCCCGTaGGAAGCACATTGCATTTTG +
Preference number: 4 (lower is better)
Translates to: IAAGVPCAGPHCAAVSFKCGQIP*EAHCIL
Trigger: CAAAATGCAATGTGCTTCTCACGGGATTTGGCCACA...TTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR GCA 90 bp GACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTCTGCCGTCAAACCCATaGCCAACGCCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: DYRRHFQALKGMPSAAGCLPSNP*PTPLPG
Trigger: TCCTGGAAGAGGCGTTGGGCATGGGTTTGACGGCAG...ACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR GCA 90 bp AGAAGGTACAGAGATGTCCCATACACCTCCTACTCCCACACATGCACAGCCTTCCTGCCGTCAAACCCATaGCCAACGCCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RRYRDVPYTSYSHTCTAFLPSNP*PTPLPG
Trigger: TCCTGGAAGAGGCGTTGGGCATGGGTTTGACGGCAG...GAAGGCTGTGCATGTGTGGGAGTAGGAGGTGTATGGGACATCTCTGTACCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR GCA 90 bp ATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCACCCGCAGGAGTGCCATGTaGAGGACCACACTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: ICSLFLGHLNCFCQIFFTRRSAM*RTTLRG
Trigger: GCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCG...GGTGAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR GCA 90 bp TCTTGCTACAGCCCAGATTCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGACTCCAAGCAACTTCTaGTGTGGGCACCCAAATCTG +
Preference number: 4 (lower is better)
Translates to: SCYSPDSTPAKGKPGAERTPSNF*CGHPNL
Trigger: CAGATTTGGGTGCCCACAGCAGAAGTTGCTTGGAGT...CCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGAATCTGGGCTGTAGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR GCA 90 bp TCTTGCTACAGCCCAGATTCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGTGGAGCTGGATCAGATaGACTCCAAGCAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: SCYSPDSTPAKGKPGAERWSWIR*TPSNFC
Trigger: GCAGAAGTTGCTTGGAGTGCATCTGATCCAGCTCCA...CCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGAATCTGGGCTGTAGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CCA 90 bp GACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGGACCTGAGCAGCCATCTCTaGCGCTTCGGGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: DCKCYLLAHLTSSLLVWDLSSHL*RFGPPP
Trigger: GGGTGGGGGCCCGAAGCGCCAGAGATGGCTGCTCAG...GTCCCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR CCA 90 bp TGGAACTTTCCACAGACCCAAAGCCATGGTGATGGCAGAGCTCACCTTATAAATAAAAGGCGCCGCCAGTaGGAGGCCCTCGCCTTCGTC +
Preference number: 4 (lower is better)
Translates to: WNFPQTQSHGDGRAHLINKRRRQ*EALAFV
Trigger: GACGAAGGCGAGGGCCTCCCACTGGCGGCGCCTTTT...ATTTATAAGGTGAGCTCTGCCATCACCATGGCTTTGGGTCTGTGGAAAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CCA 90 bp GAAGCCACAAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTTGGGTAGTATGAAATaGCCAATGGTGAAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: EATKLPQECHVQDHTARLLGSMK*PMVKGC
Trigger: GCACCCTTTCACCATTGGCCATTTCATACTACCCAA...CAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTTGTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CCA 90 bp AAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCAGTGCTTATCTGGCGTaGGTATTGACTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: KIAAGVPCAGPHCAAVSFSAYLA*VLTTWP
Trigger: AGGCCAAGTAGTCAATACCCACGCCAGATAAGCACT...GAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CCA 90 bp AGTGAGAACCAGGTCCAGCCACTGTGCACAGCCAGGCATGCCAGCTGCTGCAGTTGGATGAGAATTCAGTaGCGTCTGGATGCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: SENQVQPLCTARHASCCSWMRIQ*RLDAWK
Trigger: TTTCCAAGCATCCAGACGCCACTGAATTCTCATCCA...ACTGCAGCAGCTGGCATGCCTGGCTGTGCACAGTGGCTGGACCTGGTTCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
3UTR CAA 72 bp AGCCAGTCAGTGTGGCCAAATCCCGTGAGAAGCACATaGCATTTTGGAAGGCCCAACACCTTCCAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: SQSVWPNPVRST*HFGRPNTFQSR
Trigger: CCGACTCTGGAAGGTGTTGGGCCTTCCAAAATGCAATGTGCTTCTCACGGGATTTGGCCACACTGACTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR TCA 90 bp CTTGCTACAGCCCAGATTCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGTATGCTTGGAAACATCTaGAACTGCACAGCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LATAQIPHQPKASQEQRGMLGNI*NCTAPK
Trigger: CTTTGGGGCTGTGCAGTTTCAGATGTTTCCAAGCAT...ACCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGAATCTGGGCTGTAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR GCA 90 bp AGTGTGGCCAAATCCCGTGAGAAGCACATTGCATTTTGGAAGGCCCAACACCTTCTGCCGTCAAACCCATaGCCAACGCCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SVAKSREKHIAFWKAQHLLPSNP*PTPLPG
Trigger: TCCTGGAAGAGGCGTTGGGCATGGGTTTGACGGCAG...AAGGTGTTGGGCCTTCCAAAATGCAATGTGCTTCTCACGGGATTTGGCCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR GCA 90 bp GCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGCCTCGCGTCCCCGGCTaGCGTCAAACCCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: ADCKCYLLAHLTSSLLVWPRVPG*RQTHAQ
Trigger: TTGGGCATGGGTTTGACGGCAGCCGGGGACGCGAGG...CCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR GCA 90 bp GTGAGGAGGAAGCCACAAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGATGTCTTTGTGGGGTTaGATGGAGACACAGCTCACT +
Preference number: 4 (lower is better)
Translates to: VRRKPQNCRRSAMCRTTLMSLWG*METQLT
Trigger: AGTGAGCTGTGTCTCCATGCAACCCCACAAAGACAT...CAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTTGTGGCTTCCTCCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR GCA 90 bp AGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCCGCAGGAGTGCCATGTaGAGGACCACACTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: SICSLFLGHLNCFCQIFFRRSAM*RTTLRG
Trigger: GCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCG...GAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp CATGGCCAGATTTGCAATGTTTCGCATCACTACTTAACTTCTACAATCTCTGGCCCCTCACGGCGGAGCTaGGCATCCCTCGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: HGQICNVSHHYLTSTISGPSRRS*ASLAEQ
Trigger: CTGCTCAGCGAGGGATGCCCAGCTCCGCCGTGAGGG...GCCAGAGATTGTAGAAGTTAAGTAGTGATGCGAAACATTGCAAATCTGGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CCA 90 bp AGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTGCTGACGAAAGCCAGTCAGTGTaGCCAAATCCCGTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RRHFQALKGMPSAAGCADESQSV*PNPVRS
Trigger: GCTTCTCACGGGATTTGGCCACACTGACTGGCTTTC...GTCAGCACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp GAAGCCACAAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGCTATCATGTGACCCCTaGGATCAAAAATGGCATCAT +
Preference number: 4 (lower is better)
Translates to: EATKLPQECHVQDHTARLLSCDP*DQKWHH
Trigger: ATGATGCCATTTTTGATCCCAGGGGTCACATGATAG...CAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTTGTGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR TCA 90 bp AGTGGGGCAGGCAGCTCCAGGCACTGGCACAGGCACTGGATCTGTGTAAGCCTGTGGTCATTCCCATTTTaGTCAAGAAATTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: SGAGSSRHWHRHWICVSLWSFPF*SRNCRE
Trigger: TTCTCTGCAATTTCTTGATCAAAATGGGAATGACCA...CAGGCTTACACAGATCCAGTGCCTGTGCCAGTGCCTGGAGCTGCCTGCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR TCA 90 bp AGTGAGAACCAGGTCCAGCCACTGTGCACAGCCAGGCATGCCAGCTGCTGCAGTTCATACCATTCAGACTaGAAGCAATCAAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SENQVQPLCTARHASCCSSYHSD*KQSRVL
Trigger: CAGAACTCTTGATTGCTTTCAGTCTGAATGGTATGA...ACTGCAGCAGCTGGCATGCCTGGCTGTGCACAGTGGCTGGACCTGGTTCTCACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR GCA 90 bp CATGGCCAGATTTGCAATGTTTCGCATCACTACTTAACTTCTACAATCTCTGGCCCTCGCGTCCCCGGCTaGCGTCAAACCCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: HGQICNVSHHYLTSTISGPRVPG*RQTHAQ
Trigger: TTGGGCATGGGTTTGACGGCAGCCGGGGACGCGAGG...GCCAGAGATTGTAGAAGTTAAGTAGTGATGCGAAACATTGCAAATCTGGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR GCA 90 bp AATTTCAGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCCCTCGCGTCCCCGGCTaGCGTCAAACCCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: NFSICSLFLGHLNCFCQIPRVPG*RQTHAQ
Trigger: TTGGGCATGGGTTTGACGGCAGCCGGGGACGCGAGG...GATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACTGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000420497.6
ENST00000452556.5
CDS-3UTR GCA 90 bp ACAGCCCAGATTCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGTGAGGGGATAGTCATCTTCAGATaGTTCAGTTATGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: TAQIPHQPKASQEQRGEGIVIFR*FSYGDL
Trigger: CAGGTCACCATAACTGAAGCATCTGAAGATGACTAT...CCCCTCACCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGAATCTGGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR GCA 90 bp GACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTAAATTGCCGCAGGAGTaGCATGTGCAGGACCACACT +
Preference number: 4 (lower is better)
Translates to: DYRRHFQALKGMPSAAGCKLPQE*HVQDHT
Trigger: AGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTT...ACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR GCA 90 bp AAGGTACAGAGATGTCCCATACACCTCCTACTCCCACACATGCACAGCCTTCCCTCCTACTCCCACACATaGACAGCCTTCCCCATTATC +
Preference number: 4 (lower is better)
Translates to: KVQRCPIHLLLPHMHSLPSYSHT*TAFPII
Trigger: GATAATGGGGAAGGCTGTGCATGTGTGGGAGTAGGA...GGGAAGGCTGTGCATGTGTGGGAGTAGGAGGTGTATGGGACATCTCTGTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR GCA 90 bp AATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCAACTGAAGACAGTTTTGTaGTGCTTTGAGAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: NCRRSAMCRTTLRGCVLQLKTVL*CFENAG
Trigger: TCCAGCATTCTCAAAGCAGCACAAAACTGTCTTCAG...TTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR GCA 90 bp TTCAGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTCGCCCAGGCTGGAGTaGAGTGGCGTGATCTCCGCT +
Preference number: 4 (lower is better)
Translates to: FSICSLFLGHLNCFCQIFSPRLE*SGVISA
Trigger: AGCGGAGATCACGCCACTGCACTCCAGCCTGGGCGA...GAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CCA 90 bp ATTGGTGAACATCTCCCATGTACCAGGTACCATGAAAGGTGCAAAATTTCAGTACTGAGCAGCCATCTCTaGCGCTTCGGGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: IGEHLPCTRYHERCKISVLSSHL*RFGPPP
Trigger: GGGTGGGGGCCCGAAGCGCCAGAGATGGCTGCTCAG...TACTGAAATTTTGCACCTTTCATGGTACCTGGTACATGGGAGATGTTCACCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420497.6
CDS-3UTR CCA 90 bp GAACATCTCCCATGTACCAGGTACCATGAAAGGTGCAAAATTTCAGTATCTGTACCCTCACGGCGGAGCTaGGCATCCCTCGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: EHLPCTRYHERCKISVSVPSRRS*ASLAEQ
Trigger: CTGCTCAGCGAGGGATGCCCAGCTCCGCCGTGAGGG...TACAGATACTGAAATTTTGCACCTTTCATGGTACCTGGTACATGGGAGATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420497.6
CDS-3UTR CCA 90 bp AGTGAGAACCAGGTCCAGCCACTGTGCACAGCCAGGCATGCCAGCTGCTGCAGTATTTGTTTTGTTCCCTaGCTTCACGAAGACCTTTCT +
Preference number: 4 (lower is better)
Translates to: SENQVQPLCTARHASCCSICFVP*LHEDLS
Trigger: AGAAAGGTCTTCGTGAAGCCAGGGAACAAAACAAAT...ACTGCAGCAGCTGGCATGCCTGGCTGTGCACAGTGGCTGGACCTGGTTCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR TCA 90 bp GACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTTCACGAAGACCTTTCTaGGTAGGACCTTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: DYRRHFQALKGMPSAAGCSRRPF*VGPSGA
Trigger: TGCACCAGAAGGTCCTACTCAGAAAGGTCTTCGTGA...ACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR TCA 90 bp GGACTTGGACCTATATCGATGGACACAATTGGTAACAGCTTCCGAAAGTCCCACATGGAAGCAGCAGTCTaGAAGCCAGTCAGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GLGPISMDTIGNSFRKSHMEAAV*KPVSVA
Trigger: GGCCACACTGACTGGCTTTCAGACTGCTGCTTCCAT...GTGGGACTTTCGGAAGCTGTTACCAATTGTGTCCATCGATATAGGTCCAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR TCA 90 bp AGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTGCTGACTGTAGTGTCACCACTTaGAGTAGCCAATTTGTCGCC +
Preference number: 4 (lower is better)
Translates to: RRHFQALKGMPSAAGCADCSVTT*SSQFVA
Trigger: GGCGACAAATTGGCTACTTCAAGTGGTGACACTACA...GTCAGCACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR TCA 90 bp ACACCTTCCAGAGTCGGTCCTCGCCACAGGAGACTAGGATGTCTTTGTGGGGTTTGTCTGCAGAGCTTGTaGGAAGAGTATTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: TPSRVGPRHRRLGCLCGVCLQSL*EEYWRK
Trigger: CTTTCTCCAATACTCTTCTCACAAGCTCTGCAGACA...AACCCCACAAAGACATCCTAGTCTCCTGTGGCGAGGACCGACTCTGGAAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR TCA 90 bp ATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCAAAACTTGGCACTACTATTaGATGAACCCATTAATGCTG +
Preference number: 4 (lower is better)
Translates to: IAAGVPCAGPHCAAVSFKTWHYY*MNPLML
Trigger: CAGCATTAATGGGTTCATTCAATAGTAGTGCCAAGT...TTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR TCA 90 bp AAGCAGCAGTCTGAAAGCCAGTCAGTGTGGCCAAATCCCGTGAGAAGCACATTGATCTGGCGTGGGTATTaGCTACTTGGCCTTGATGGT +
Preference number: 4 (lower is better)
Translates to: KQQSESQSVWPNPVRSTLIWRGY*LLGLDG
Trigger: ACCATCAAGGCCAAGTAGTCAATACCCACGCCAGAT...CAATGTGCTTCTCACGGGATTTGGCCACACTGACTGGCTTTCAGACTGCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR GCA 90 bp TGGAACTTTCCACAGACCCAAAGCCATGGTGATGGCAGAGCTCACCTTATAAATCTGCCGTCAAACCCATaGCCAACGCCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: WNFPQTQSHGDGRAHLINLPSNP*PTPLPG
Trigger: TCCTGGAAGAGGCGTTGGGCATGGGTTTGACGGCAG...ATTTATAAGGTGAGCTCTGCCATCACCATGGCTTTGGGTCTGTGGAAAGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR GCA 90 bp TTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTATAGTCGGTTCACCTCGCGTCCCCGGCTaGCGTCAAACCCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: FSFSKVWCFSCNTLIVGSPRVPG*RQTHAQ
Trigger: TTGGGCATGGGTTTGACGGCAGCCGGGGACGCGAGG...TGAACCGACTATAAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000440779.5
ENST00000452556.5
CDS-3UTR GCA 90 bp AATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCAAACATATACCTGTTCTTaGATCCCATATAGACAGGGT +
Preference number: 4 (lower is better)
Translates to: NCRRSAMCRTTLRGCVLQTYTCS*IPYRQG
Trigger: ACCCTGTCTATATGGGATGCAAGAACAGGTATATGT...TTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR GCA 90 bp AATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCAAAAAGGACATAGACCCTaGCCTCAAAGAGTTTACATT +
Preference number: 4 (lower is better)
Translates to: NCRRSAMCRTTLRGCVLQKGHRP*PQRVYI
Trigger: AATGTAAACTCTTTGAGGGCAGGGTCTATGTCCTTT...TTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CCA 90 bp TCCAAAGCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCCCCTCACGGCGGAGCTaGGCATCCCTCGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SKACFKADCKCYLLAHLTPSRRS*ASLAEQ
Trigger: CTGCTCAGCGAGGGATGCCCAGCTCCGCCGTGAGGG...GGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGCTTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp CAGCTTTGTAACCCCACAGGCATCACAGGATGCTATCATGTGACCCCTGGGATCACTAGGATGTCTTTGTaGGGTTGCATGGAGACACAG +
Preference number: 4 (lower is better)
Translates to: QLCNPTGITGCYHVTPGITRMSL*GCMETQ
Trigger: CTGTGTCTCCATGCAACCCCACAAAGACATCCTAGT...GATCCCAGGGGTCACATGATAGCATCCTGTGATGCCTGTGGGGTTACAAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp TTGTCATGCTCTTATTGGCTTCCATCTCCACAAAGCTCAGTTTGGAACTTTCCAGAGGCTCCTCCGGAGTaGCCCCAAGGCTCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: LSCSYWLPSPQSSVWNFPEAPPE*PQGSKG
Trigger: GCCTTTTGAGCCTTGGGGCCACTCCGGAGGAGCCTC...TGGAAAGTTCCAAACTGAGCTTTGTGGAGATGGAAGCCAATAAGAGCATGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR GCA 90 bp CTTGCTACAGCCCAGATTCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGTCATCTGAATTGCTTTTaGCAGATCTTCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: LATAQIPHQPKASQEQRGHLNCF*QIFFTF
Trigger: GAAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATG...ACCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGAATCTGGGCTGTAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR GCA 90 bp TCTTGCTACAGCCCAGATTCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGTCTAGCTTTGTCAGCTaGTTGTTTGTAGTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: SCYSPDSTPAKGKPGAERSSFVS*LFVVLQ
Trigger: TTGAAGCACTACAAACAAGCAGCTGACAAAGCTAGA...CCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGAATCTGGGCTGTAGCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR GCA 90 bp AAGCAGCAGTCTGAAAGCCAGTCAGTGTGGCCAAATCCCGTGAGAAGCACATTGAGACAGGGTCTTGTCTaGAGAGCTTGTGAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: KQQSESQSVWPNPVRSTLRQGLV*RACEKS
Trigger: ACTCTTCTCACAAGCTCTGCAGACAAGACCCTGTCT...CAATGTGCTTCTCACGGGATTTGGCCACACTGACTGGCTTTCAGACTGCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp CTACTTAAGGGTAGGTTTCCATTTATTGCTTGTTGTCTTGATTATGGGTCACATCTGAGCAGCCATCTCTaGCGCTTCGGGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: LLKGRFPFIACCLDYGSHLSSHL*RFGPPP
Trigger: GGGTGGGGGCCCGAAGCGCCAGAGATGGCTGCTCAG...ATGTGACCCATAATCAAGACAACAAGCAATAAATGGAAACCTACCCTTAAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CCA 90 bp TTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATCCCTCACGGCGGAGCTaGGCATCCCTCGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: FLDYSLMMHSMKITFFLNPSRRS*ASLAEQ
Trigger: CTGCTCAGCGAGGGATGCCCAGCTCCGCCGTGAGGG...ATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000440779.5
ENST00000452556.5
CDS-3UTR CCA 90 bp CTTGCTACAGCCCAGATTCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGTTCCTTCAGTAAAGTGTaGTGTTTCTCATGTAACACC +
Preference number: 4 (lower is better)
Translates to: LATAQIPHQPKASQEQRGSFSKV*CFSCNT
Trigger: GGTGTTACATGAGAAACACCACACTTTACTGAAGGA...ACCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGAATCTGGGCTGTAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CCA 90 bp AGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTGCTGACGGAGACACAGCTCACTaGAAGTTCATGGAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: RRHFQALKGMPSAAGCADGDTAH*KFMESK
Trigger: TTTAGACTCCATGAACTTCCAGTGAGCTGTGTCTCC...GTCAGCACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp AGTGTGGCCAAATCCCGTGAGAAGCACATTGCATTTTGGAAGGCCCAACACCTTCTTTGTGGGGTTGCATaGAGACACAGCTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: SVAKSREKHIAFWKAQHLLCGVA*RHSSLE
Trigger: TTCCAGTGAGCTGTGTCTCCATGCAACCCCACAAAG...AAGGTGTTGGGCCTTCCAAAATGCAATGTGCTTCTCACGGGATTTGGCCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp GACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTACTAGGATGTCTTTGTaGGGTTGCATGGAGACACAG +
Preference number: 4 (lower is better)
Translates to: DYRRHFQALKGMPSAAGCTRMSL*GCMETQ
Trigger: CTGTGTCTCCATGCAACCCCACAAAGACATCCTAGT...ACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp AAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCTTCAGGATTAGTTTGTaGGCAACTGCTTTTATCTCT +
Preference number: 4 (lower is better)
Translates to: KIAAGVPCAGPHCAAVSFFRISL*ATAFIS
Trigger: AGAGATAAAAGCAGTTGCCCACAAACTAATCCTGAA...GAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR CAA 72 bp GGCACACAGTGCTTATCTGGCGTGGGTATTGACTACTaGGCCTTGATGGTGGAGGATGTAATGATGGGTAAC +
Preference number: 4 (lower is better)
Translates to: GTQCLSGVGIDY*ALMVEDVMMGN
Trigger: GTTACCCATCATTACATCCTCCACCATCAAGGCCAAGTAGTCAATACCCACGCCAGATAAGCACTGTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR TCA 90 bp GCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGATGGAAGCAGCAGTCTaGAAGCCAGTCAGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: ADCKCYLLAHLTSSLLVWMEAAV*KPVSVA
Trigger: GGCCACACTGACTGGCTTTCAGACTGCTGCTTCCAT...CCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR TCA 90 bp CAGCTTTGTAACCCCACAGGCATCACAGGATGCTATCATGTGACCCCTGGGATCTGGCCCATCAATTTGTaGATCTCCCCAGATTTAAGA +
Preference number: 4 (lower is better)
Translates to: QLCNPTGITGCYHVTPGIWPINL*ISPDLR
Trigger: TCTTAAATCTGGGGAGATTCACAAATTGATGGGCCA...GATCCCAGGGGTCACATGATAGCATCCTGTGATGCCTGTGGGGTTACAAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR TCA 90 bp TGGAACTTTCCACAGACCCAAAGCCATGGTGATGGCAGAGCTCACCTTATAAATGACCCAAAGCCATGGTaGTGGCAGAGCTCACCTTAT +
Preference number: 4 (lower is better)
Translates to: WNFPQTQSHGDGRAHLINDPKPW*WQSSPY
Trigger: ATAAGGTGAGCTCTGCCATCACCATGGCTTTGGGTC...ATTTATAAGGTGAGCTCTGCCATCACCATGGCTTTGGGTCTGTGGAAAGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR GCA 90 bp GTGCAAAATTTCAGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCTGCCGTCAAACCCATaGCCAACGCCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VQNFSICSLFLGHLNCFCLPSNP*PTPLPG
Trigger: TCCTGGAAGAGGCGTTGGGCATGGGTTTGACGGCAG...GCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACTGAAATTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420497.6
CDS-3UTR GCA 90 bp TTTATTCAACATATAATTGGTGAACATCTCCCATGTACCAGGTACCATGAAAGGCCTCGCGTCCCCGGCTaGCGTCAAACCCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: FIQHIIGEHLPCTRYHERPRVPG*RQTHAQ
Trigger: TTGGGCATGGGTTTGACGGCAGCCGGGGACGCGAGG...CCTTTCATGGTACCTGGTACATGGGAGATGTTCACCAATTATATGTTGAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420497.6
CDS-3UTR GCA 90 bp CGAACCTACATATCATTATCACCCAAAGTCCACAGTTTATATTATTCCTTCTGGCCTCGCGTCCCCGGCTaGCGTCAAACCCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: RTYISLSPKVHSLYYSFWPRVPG*RQTHAQ
Trigger: TTGGGCATGGGTTTGACGGCAGCCGGGGACGCGAGG...CCAGAAGGAATAATATAAACTGTGGACTTTGGGTGATAATGATATGTAGGTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR GCA 90 bp TTAAAGGGAATGCCCTCTGCAGCGGGATGTGCTGACGGTCAAGACCACGTTCGATCTAGCTTTGTCAGCTaGTTGTTTGTAGTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: LKGMPSAAGCADGQDHVRSSFVS*LFVVLQ
Trigger: TTGAAGCACTACAAACAAGCAGCTGACAAAGCTAGA...TCGAACGTGGTCTTGACCGTCAGCACATCCCGCTGCAGAGGGCATTCCCTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR GCA 90 bp GCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGTGTGCAGGACCACACTaGGCGGCTGTGTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: ADCKCYLLAHLTSSLLVWCAGPH*AAVSFK
Trigger: TTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACA...CCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR GCA 90 bp CATATACCTGTTCTTGCATCCCATATAGACAGGGTCTTGTCTGCAGAGCTTGTGACCACGTTCGAACTGTaGCGTCAGAGCCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: HIPVLASHIDRVLSAELVTTFEL*RQSLQK
Trigger: TTTCTGGAGGCTCTGACGGCACAGTTCGAACGTGGT...CACAAGCTCTGCAGACAAGACCCTGTCTATATGGGATGCAAGAACAGGTATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR GCA 90 bp AGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCTGTCTCCAGCTCCAGTaGAGCTCTGACAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SICSLFLGHLNCFCQIFFCLQLQ*SSDSAP
Trigger: TGGAGCACTGTCAGAGCTGCACTGGAGCTGGAGACA...GAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR GCA 90 bp TTTGGAAGGCCCAACACCTTCCAGAGTCGGTCCTCGCCACAGGAGACTAGGATGAGTAAAGCAGAAGCGTaGATATGCTTCCCAATTTAT +
Preference number: 4 (lower is better)
Translates to: FGRPNTFQSRSSPQETRMSKAEA*ICFPIY
Trigger: ATAAATTGGGAAGCATATGCACGCTTCTGCTTTACT...CATCCTAGTCTCCTGTGGCGAGGACCGACTCTGGAAGGTGTTGGGCCTTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CCA 90 bp CTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATTTTCAGCACTGAGCAGCCATCTCTaGCGCTTCGGGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: LFAYDAFDENHVLSEFSALSSHL*RFGPPP
Trigger: GGGTGGGGGCCCGAAGCGCCAGAGATGGCTGCTCAG...TGCTGAAAATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000440779.5
ENST00000452556.5
CDS-3UTR CCA 90 bp GACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTCTGGGTGTAGACATCTaGAACATTCCCAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: DYRRHFQALKGMPSAAGCLGVDI*NIPNSS
Trigger: AGAACTGTTGGGAATGTTCCAGATGTCTACACCCAG...ACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp ACAGAGATGTCCCATACACCTCCTACTCCCACACATGCACAGCCTTCCCCATTACTGGGTGTAGACATCTaGAACATTCCCAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: TEMSHTPPTPTHAQPSPLLGVDI*NIPNSS
Trigger: AGAACTGTTGGGAATGTTCCAGATGTCTACACCCAG...TAATGGGGAAGGCTGTGCATGTGTGGGAGTAGGAGGTGTATGGGACATCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR CCA 90 bp CATATACCTGTTCTTGCATCCCATATAGACAGGGTCTTGTCTGCAGAGCTTGTGGAAAGCCAGTCAGTGTaGCCAAATCCCGTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: HIPVLASHIDRVLSAELVESQSV*PNPVRS
Trigger: GCTTCTCACGGGATTTGGCCACACTGACTGGCTTTC...CACAAGCTCTGCAGACAAGACCCTGTCTATATGGGATGCAAGAACAGGTATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp TCCAGAGTCGGTCCTCGCCACAGGAGACTAGGATGTCTTTGTGGGGTTGCATGGGCTAACTCAAGCAGATaGAAAACGAGGCATAAAATA +
Preference number: 4 (lower is better)
Translates to: SRVGPRHRRLGCLCGVAWANSSR*KTRHKI
Trigger: TATTTTATGCCTCGTTTTCCATCTGCTTGAGTTAGC...CCATGCAACCCCACAAAGACATCCTAGTCTCCTGTGGCGAGGACCGACTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CCA 90 bp AGTGTGGCCAAATCCCGTGAGAAGCACATTGCATTTTGGAAGGCCCAACACCTTAAATTTAGCCAGGCATaGTGGTGCTTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: SVAKSREKHIAFWKAQHLKFSQA*WCLPVV
Trigger: GACTACAGGCAAGCACCACCATGCCTGGCTAAATTT...AAGGTGTTGGGCCTTCCAAAATGCAATGTGCTTCTCACGGGATTTGGCCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CCA 90 bp AAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCAGGAGCTTGTGTAGTTaGAATAGAAATCAGATATCT +
Preference number: 4 (lower is better)
Translates to: KIAAGVPCAGPHCAAVSFRSLCS*NRNQIS
Trigger: AGATATCTGATTTCTATTCCAACTACACAAGCTCCT...GAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR CAA 72 bp GAGGCTAAAGGAGGAGAATTACTTGAGGCCACAAGTTaGGGGCTGCAATATGCTCTGACTGTGCTATTGCAC +
Preference number: 4 (lower is better)
Translates to: EAKGGELLEATS*GLQYALTVLLH
Trigger: GTGCAATAGCACAGTCAGAGCATATTGCAGCCCCAAACTTGTGGCCTCAAGTAATTCTCCTCCTTTAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR TCA 90 bp CAGCTTTGTAACCCCACAGGCATCACAGGATGCTATCATGTGACCCCTGGGATCTCATACCATTCAGACTaGAAGCAATCAAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: QLCNPTGITGCYHVTPGISYHSD*KQSRVL
Trigger: CAGAACTCTTGATTGCTTTCAGTCTGAATGGTATGA...GATCCCAGGGGTCACATGATAGCATCCTGTGATGCCTGTGGGGTTACAAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR TCA 90 bp CATATACCTGTTCTTGCATCCCATATAGACAGGGTCTTGTCTGCAGAGCTTGTGTCACGAAGACCTTTCTaGGTAGGACCTTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: HIPVLASHIDRVLSAELVSRRPF*VGPSGA
Trigger: TGCACCAGAAGGTCCTACTCAGAAAGGTCTTCGTGA...CACAAGCTCTGCAGACAAGACCCTGTCTATATGGGATGCAAGAACAGGTATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR TCA 90 bp GTTTGGGACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGTGGCCCATCAATTTGTaGATCTCCCCAGATTTAAGA +
Preference number: 4 (lower is better)
Translates to: VWDYRRHFQALKGMPSAAWPINL*ISPDLR
Trigger: TCTTAAATCTGGGGAGATTCACAAATTGATGGGCCA...CGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTCCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR TCA 90 bp ATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCACCAGAATCTCCCCGTCGTaGGAAAACACAACCGTGTGT +
Preference number: 4 (lower is better)
Translates to: ICSLFLGHLNCFCQIFFTRISPS*ENTTVC
Trigger: ACACACGGTTGTGTTTTCTCACGACGGGGAGATTCT...GGTGAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR GCA 90 bp AAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGGACTACAGGAAATTGCCGCAGGAGTaGCATGTGCAGGACCACACT +
Preference number: 4 (lower is better)
Translates to: KCYLLAHLTSSLLVWDYRKLPQE*HVQDHT
Trigger: AGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTT...CCTGTAGTCCCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp GTGAGGAGGAAGCCACAAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGTTGGTTGCATATCTATaGGAAATTCTGAATCCTTTG +
Preference number: 4 (lower is better)
Translates to: VRRKPQNCRRSAMCRTTLLVAYL*EILNPL
Trigger: CAAAGGATTCAGAATTTCCCATAGATATGCAACCAA...CAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTTGTGGCTTCCTCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp TCACATATACCTGTTCTTGCATCCCATATAGACAGGGTCTTGTCTGCAGAGCTTGAAAGCCAGTCAGTGTaGCCAAATCCCGTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SHIPVLASHIDRVLSAELESQSV*PNPVRS
Trigger: GCTTCTCACGGGATTTGGCCACACTGACTGGCTTTC...AAGCTCTGCAGACAAGACCCTGTCTATATGGGATGCAAGAACAGGTATATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp AGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCTTGTCGCCACTGGGATaGAAGCAGCAGTCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SICSLFLGHLNCFCQIFFLSPLG*KQQSES
Trigger: GCTTTCAGACTGCTGCTTCCATCCCAGTGGCGACAA...GAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp GACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGGACCCAATTTGTCGCCACTaGGATGGAAGCAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: DCKCYLLAHLTSSLLVWDPICRH*DGSSSL
Trigger: CAGACTGCTGCTTCCATCCCAGTGGCGACAAATTGG...GTCCCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp GACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTAGTTCTTTGCTGGTTTaGGACTACAGGAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: DYRRHFQALKGMPSAAGCSSLLV*DYRRHF
Trigger: AAAATGCCTCCTGTAGTCCCAAACCAGCAAAGAACT...ACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR TCA 90 bp GACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTTCATACCATTCAGACTaGAAGCAATCAAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: DYRRHFQALKGMPSAAGCSYHSD*KQSRVL
Trigger: CAGAACTCTTGATTGCTTTCAGTCTGAATGGTATGA...ACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR TCA 90 bp CATATACCTGTTCTTGCATCCCATATAGACAGGGTCTTGTCTGCAGAGCTTGTGTGTGGCCAAATCCCGTaGGAAGCACATTGCATTTTG +
Preference number: 4 (lower is better)
Translates to: HIPVLASHIDRVLSAELVCGQIP*EAHCIL
Trigger: CAAAATGCAATGTGCTTCTCACGGGATTTGGCCACA...CACAAGCTCTGCAGACAAGACCCTGTCTATATGGGATGCAAGAACAGGTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR TCA 90 bp AATGCATGTGACCATAAAGTGACTGCTCACATATACCTGTTCTTGCATCCCATAATGGAAGCAGCAGTCTaGAAGCCAGTCAGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: NACDHKVTAHIYLFLHPIMEAAV*KPVSVA
Trigger: GGCCACACTGACTGGCTTTCAGACTGCTGCTTCCAT...TATGGGATGCAAGAACAGGTATATGTGAGCAGTCACTTTATGGTCACATGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR TCA 90 bp AAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGGACTACAGGCCATTGCCACTTGCCTaGGCTAAAACTCGACCTGAT +
Preference number: 4 (lower is better)
Translates to: KCYLLAHLTSSLLVWDYRPLPLA*AKTRPD
Trigger: ATCAGGTCGAGTTTTAGCTCAGGCAAGTGGCAATGG...CCTGTAGTCCCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR TCA 90 bp CCTGAGCTAAAACTCGACCTGATGAATCAAAATTCACCTCATTGCCAGGACTTGCCATTGCCACTTGCCTaGGCTAAAACTCGACCTGAT +
Preference number: 4 (lower is better)
Translates to: PELKLDLMNQNSPHCQDLPLPLA*AKTRPD
Trigger: ATCAGGTCGAGTTTTAGCTCAGGCAAGTGGCAATGG...CAAGTCCTGGCAATGAGGTGAATTTTGATTCATCAGGTCGAGTTTTAGCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR TCA 90 bp TTTTTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGTGCAGCGGGATGTGCTaGCGGTCAAGACCACGTTCG +
Preference number: 4 (lower is better)
Translates to: FFLDYSLMMHSMKITFFLCSGMC*RSRPRS
Trigger: CGAACGTGGTCTTGACCGTCAGCACATCCCGCTGCA...CAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR TCA 90 bp AGTGTGGCCAAATCCCGTGAGAAGCACATTGCATTTTGGAAGGCCCAACACCTTATAGGAGTTTTATGGTaGACAGCCAAGTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: SVAKSREKHIAFWKAQHLIGVLW*TAKCGN
Trigger: ATTGCCACACTTGGCTGTTCACCATAAAACTCCTAT...AAGGTGTTGGGCCTTCCAAAATGCAATGTGCTTCTCACGGGATTTGGCCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR TCA 90 bp TCAAATAGGAGTTTTATGGTGAACAGCCAAGTGTGGCAATTGAATGCCAGTTTTGCTCCAGTGCAGCTCTaGCAGTGCTCCATCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SNRSFMVNSQVWQLNASFAPVQL*QCSILV
Trigger: GACAAGGATGGAGCACTGTCAGAGCTGCACTGGAGC...AAAACTGGCATTCAATTGCCACACTTGGCTGTTCACCATAAAACTCCTATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR TCA 90 bp ATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCACCAGGACATGGACATTATaGGACCCATGTGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: ICSLFLGHLNCFCQIFFTRTWTL*DPCVFL
Trigger: GAGGAACACACATGGGTCTCATAATGTCCATGTCCT...GGTGAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR GCA 90 bp GACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTCATCTGAATTGCTTTTaGCAGATCTTCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: DYRRHFQALKGMPSAAGCHLNCF*QIFFTF
Trigger: GAAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATG...ACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR GCA 90 bp AAGCAGCAGTCTGAAAGCCAGTCAGTGTGGCCAAATCCCGTGAGAAGCACATTGCATCTGAATTGCTTTTaGCAGATCTTCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: KQQSESQSVWPNPVRSTLHLNCF*QIFFTF
Trigger: GAAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATG...CAATGTGCTTCTCACGGGATTTGGCCACACTGACTGGCTTTCAGACTGCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR GCA 90 bp GAGGTCAGCATTTTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTAAATTGCCGCAGGAGTaGCATGTGCAGGACCACACT +
Preference number: 4 (lower is better)
Translates to: EVSIFSFSKVWCFSCNTLKLPQE*HVQDHT
Trigger: AGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTT...AAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAAAATGCTGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR GCA 90 bp ATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCACCCACATAGGCACACAGTaGTTATCTGGCGTGGGTATT +
Preference number: 4 (lower is better)
Translates to: ICSLFLGHLNCFCQIFFTHIGTQ*LSGVGI
Trigger: AATACCCACGCCAGATAAGCACTGTGTGCCTATGTG...GGTGAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CCA 90 bp GACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTTTGGACCTATATCGATaGACACAATTGGTAACAGCT +
Preference number: 4 (lower is better)
Translates to: DYRRHFQALKGMPSAAGCLDLYR*TQLVTA
Trigger: AGCTGTTACCAATTGTGTCCATCGATATAGGTCCAA...ACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
3UTR CAA 72 bp CATAGTAAACTCCCTCACAAACTGAGCCACTCCTCATaGCAGCTCTCTTCTCTGGTGTCTTTCCCTACAGAT +
Preference number: 4 (lower is better)
Translates to: HSKLPHKLSHSS*QLSSLVSFPTD
Trigger: ATCTGTAGGGAAAGACACCAGAGAAGAGAGCTGCAATGAGGAGTGGCTCAGTTTGTGAGGGAGTTTACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR CAA 72 bp CAGTGCTTATCTGGCGTGGGTATTGACTACTTGGCCTaGATGGTGGAGGATGTAATGATGGGTAACATTTCC +
Preference number: 4 (lower is better)
Translates to: QCLSGVGIDYLA*MVEDVMMGNIS
Trigger: GGAAATGTTACCCATCATTACATCCTCCACCATCAAGGCCAAGTAGTCAATACCCACGCCAGATAAGCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR TCA 90 bp GCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGATGCTTCAGTTATGGTaGCCTGTTCCAGGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: ADCKCYLLAHLTSSLLVWMLQLW*PVPGSR
Trigger: CCTACTACCTGGAACAGGTCACCATAACTGAAGCAT...CCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331683.10
CDS-3UTR TCA 90 bp TTGTGGGGTTGCATGGAGACACAGCTCACTGGAAGTTCATGGAGTCTAAAAATGTGTTCTTGGGCCATCTaGATTGCTTTTGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: LWGCMETQLTGSSWSLKMCSWAI*IAFARS
Trigger: AGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACA...CATTTTTAGACTCCATGAACTTCCAGTGAGCTGTGTCTCCATGCAACCCCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR TCA 90 bp GCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGTGTGGCCAAATCCCGTaGGAAGCACATTGCATTTTG +
Preference number: 4 (lower is better)
Translates to: ADCKCYLLAHLTSSLLVWCGQIP*EAHCIL
Trigger: CAAAATGCAATGTGCTTCTCACGGGATTTGGCCACA...CCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR TCA 90 bp GCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGTGTAGTGTCACCACTTaGAGTAGCCAATTTGTCGCC +
Preference number: 4 (lower is better)
Translates to: ADCKCYLLAHLTSSLLVWCSVTT*SSQFVA
Trigger: GGCGACAAATTGGCTACTTCAAGTGGTGACACTACA...CCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR TCA 90 bp GTTCCTGGTTTTATAAGGCGGATATGGGATGCTGAATGTTACTGTGTTGTTAACAACTCCCTCACAAACTaGGCCACTCCTCATTGCAGC +
Preference number: 4 (lower is better)
Translates to: VPGFIRRIWDAECYCVVNNSLTN*ATPHCS
Trigger: GCTGCAATGAGGAGTGGCTCAGTTTGTGAGGGAGTT...GTTAACAACACAGTAACATTCAGCATCCCATATCCGCCTTATAAAACCAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR TCA 90 bp CTGGTGTCTTTCCCTACAGATTCCAGTGGCTTCAAAAGCTGTGAACTAGGGTCTTGTAAAGACTCTGGATaGCTGTCTTCCTCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LVSFPTDSSGFKSCELGSCKDSG*LSSSKG
Trigger: TCCTTTTGAGGAAGACAGTCATCCAGAGTCTTTACA...AGACCCTAGTTCACAGCTTTTGAAGCCACTGGAATCTGTAGGGAAAGACACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR TCA 90 bp AATTTCAGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCAGGAGGAGAATTACTTaGGGCCACAAGTTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: NFSICSLFLGHLNCFCQIRRRIT*GHKFGA
Trigger: AGCCCCAAACTTGTGGCCTCAAGTAATTCTCCTCCT...GATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR TCA 90 bp TTTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATGGGGGCTGTCATCCTaGGTGTCCTCTATCCCTGTC +
Preference number: 4 (lower is better)
Translates to: FPGLFAYDAFDENHVLSEWGLSS*VSSIPV
Trigger: GACAGGGATAGAGGACACTCAGGATGACAGCCCCCA...TTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR GCA 90 bp GACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGGACAGACAGGGTCTTGTCTaGAGAGCTTGTGAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: DCKCYLLAHLTSSLLVWDRQGLV*RACEKS
Trigger: ACTCTTCTCACAAGCTCTGCAGACAAGACCCTGTCT...GTCCCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp GACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGGACCTCATTGCCAGGACTTaGACCTATATCGATGGACAC +
Preference number: 4 (lower is better)
Translates to: DCKCYLLAHLTSSLLVWDLIART*TYIDGH
Trigger: GTGTCCATCGATATAGGTCCAAGTCCTGGCAATGAG...GTCCCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp AGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTGCTGACGCTAAAATTGTCATCTaGTATCATGTCATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: RRHFQALKGMPSAAGCADAKIVI*YHVILK
Trigger: CTTCAGAATGACATGATACCAGATGACAATTTTAGC...GTCAGCACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR CCA 90 bp GGACTTGGACCTATATCGATGGACACAATTGGTAACAGCTTCCGAAAGTCCCACGTGAACAGCCAAGTGTaGCAATTGAATGCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: GLGPISMDTIGNSFRKSHVNSQV*QLNASF
Trigger: AAAACTGGCATTCAATTGCCACACTTGGCTGTTCAC...GTGGGACTTTCGGAAGCTGTTACCAATTGTGTCCATCGATATAGGTCCAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR TCA 90 bp AATTTCAGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCATGCTTCAGTTATGGTaGCCTGTTCCAGGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: NFSICSLFLGHLNCFCQIMLQLW*PVPGSR
Trigger: CCTACTACCTGGAACAGGTCACCATAACTGAAGCAT...GATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420497.6
ENST00000452556.5
CDS-3UTR TCA 90 bp AAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGGACTACAGGTGTTCTTGGGCCATCTaGATTGCTTTTGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: KCYLLAHLTSSLLVWDYRCSWAI*IAFARS
Trigger: AGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACA...CCTGTAGTCCCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR TCA 90 bp AGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCTGTTCTTGGGCCATCTaGATTGCTTTTGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: SICSLFLGHLNCFCQIFFCSWAI*IAFARS
Trigger: AGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACA...GAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000420497.6
ENST00000452556.5
CDS-3UTR TCA 90 bp CCTGAGCTAAAACTCGACCTGATGAATCAAAATTCACCTCATTGCCAGGACTTGTGTCTGCAGAGCTTGTaGGAAGAGTATTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: PELKLDLMNQNSPHCQDLCLQSL*EEYWRK
Trigger: CTTTCTCCAATACTCTTCTCACAAGCTCTGCAGACA...CAAGTCCTGGCAATGAGGTGAATTTTGATTCATCAGGTCGAGTTTTAGCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR TCA 90 bp TTGTCATGCTCTTATTGGCTTCCATCTCCACAAAGCTCAGTTTGGAACTTTCCATGTCATCTGGTATCTTaGAGTCCAACAGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSCSYWLPSPQSSVWNFPCHLVS*SPTEAP
Trigger: AGGAGCCTCTGTTGGACTTCAAGATACCAGATGACA...TGGAAAGTTCCAAACTGAGCTTTGTGGAGATGGAAGCCAATAAGAGCATGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR GCA 90 bp TTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATTGTGCAGGACCACACTaGGCGGCTGTGTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FLDYSLMMHSMKITFFLNCAGPH*AAVSFK
Trigger: TTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACA...ATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR GCA 90 bp TCAAATAGGAGTTTTATGGTGAACAGCCAAGTGTGGCAATTGAATGCCAGTTTTAGGAAGCCACAAAATTaGCGCAGGAGTGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: SNRSFMVNSQVWQLNASFRKPQN*RRSAMC
Trigger: GCACATGGCACTCCTGCGGCAATTTTGTGGCTTCCT...AAAACTGGCATTCAATTGCCACACTTGGCTGTTCACCATAAAACTCCTATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR GCA 90 bp TGGGGTTGCATGGAGACACAGCTCACTGGAAGTTCATGGAGTCTAAAAATGTTTGCAGAAGCGTGCATATaGTTCCCAATTTATGCAGCT +
Preference number: 4 (lower is better)
Translates to: WGCMETQLTGSSWSLKMFAEACI*FPIYAA
Trigger: AGCTGCATAAATTGGGAAGCATATGCACGCTTCTGC...AAACATTTTTAGACTCCATGAACTTCCAGTGAGCTGTGTCTCCATGCAACCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CCA 90 bp AAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGGACTACAGGCTGGGTGTAGACATCTaGAACATTCCCAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: KCYLLAHLTSSLLVWDYRLGVDI*NIPNSS
Trigger: AGAACTGTTGGGAATGTTCCAGATGTCTACACCCAG...CCTGTAGTCCCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp GACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTATTCAGGTTTGGATTTaGTTGCATATCTATGGGAAA +
Preference number: 4 (lower is better)
Translates to: DYRRHFQALKGMPSAAGCIQVWI*LHIYGK
Trigger: TTTCCCATAGATATGCAACCAAATCCAAACCTGAAT...ACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp TCCAAAGCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCTTGTCGCCACTGGGATaGAAGCAGCAGTCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SKACFKADCKCYLLAHLTLSPLG*KQQSES
Trigger: GCTTTCAGACTGCTGCTTCCATCCCAGTGGCGACAA...GGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGCTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp GTTTGGGACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGTTAAGATCTAGCAAATaGATAACACCATTGCCACTT +
Preference number: 4 (lower is better)
Translates to: VWDYRRHFQALKGMPSAALRSSK*ITPLPL
Trigger: AAGTGGCAATGGTGTTATCCATTTGCTAGATCTTAA...CGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTCCCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp AGCTCTCTTCTCTGGTGTCTTTCCCTACAGATTCCAGTGGCTTCAAAAGCTGTGAACTTCTACAATCTCTaGCCTCCTCTTGATCCTATA +
Preference number: 4 (lower is better)
Translates to: SSLLWCLSLQIPVASKAVNFYNL*PPLDPI
Trigger: TATAGGATCAAGAGGAGGCCAGAGATTGTAGAAGTT...CACAGCTTTTGAAGCCACTGGAATCTGTAGGGAAAGACACCAGAGAAGAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CCA 90 bp TTCAGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCGTAATCCTAGCACTTTaGGAGGATTGCTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: FSICSLFLGHLNCFCQIFVILAL*EDCLRT
Trigger: TGTCCTCAAGCAATCCTCCCAAAGTGCTAGGATTAC...GAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR TCA 90 bp GAATGCTGTGTAAGCTTTGTTCCTGGTTTTATAAGGCGGATATGGGATGCTGAATGTTCTTGGGCCATCTaGATTGCTTTTGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: ECCVSFVPGFIRRIWDAECSWAI*IAFARS
Trigger: AGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACA...TTCAGCATCCCATATCCGCCTTATAAAACCAGGAACAAAGCTTACACAGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR TCA 90 bp CTGGTGTCTTTCCCTACAGATTCCAGTGGCTTCAAAAGCTGTGAACTAGGGTCTTGGTCATTCCCATTTTaGTCAAGAAATTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LVSFPTDSSGFKSCELGSWSFPF*SRNCRE
Trigger: TTCTCTGCAATTTCTTGATCAAAATGGGAATGACCA...AGACCCTAGTTCACAGCTTTTGAAGCCACTGGAATCTGTAGGGAAAGACACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR TCA 90 bp TCCAAAGCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGAATCTCCCCGTCGTaGGAAAACACAACCGTGTGT +
Preference number: 4 (lower is better)
Translates to: SKACFKADCKCYLLAHLTRISPS*ENTTVC
Trigger: ACACACGGTTGTGTTTTCTCACGACGGGGAGATTCT...GGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGCTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR GCA 90 bp TGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGAGGAAGCCACAAAATTaGCGCAGGAGTGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: CFKADCKCYLLAHLTSSLRKPQN*RRSAMC
Trigger: GCACATGGCACTCCTGCGGCAATTTTGTGGCTTCCT...CAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR GCA 90 bp CATTCTTTAATGACCACCTCACATAGGCACACAGTGCTTATCTGGCGTGGGTATCAAAATTCACCTCATTaGCAGGACTTGGACCTATAT +
Preference number: 4 (lower is better)
Translates to: HSLMTTSHRHTVLIWRGYQNSPH*QDLDLY
Trigger: ATATAGGTCCAAGTCCTGGCAATGAGGTGAATTTTG...ATACCCACGCCAGATAAGCACTGTGTGCCTATGTGAGGTGGTCATTAAAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR GCA 90 bp GCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTAAACACAACCGTGTGTaGCTCGTTTTCGTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: ACFKADCKCYLLAHLTSSKHNRV*LVFVAH
Trigger: ATGGGCCACGAAAACGAGGCACACACGGTTGTGTTT...AGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR GCA 90 bp TGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGACCACGTTCGAACTGTaGCGTCAGAGCCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: CFKADCKCYLLAHLTSSLTTFEL*RQSLQK
Trigger: TTTCTGGAGGCTCTGACGGCACAGTTCGAACGTGGT...CAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR GCA 90 bp AGCTCTCTTCTCTGGTGTCTTTCCCTACAGATTCCAGTGGCTTCAAAAGCTGTGTTATCAGGATTGTCATaGTCTTATTGGCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: SSLLWCLSLQIPVASKAVLSGLS*SYWLPS
Trigger: AGATGGAAGCCAATAAGAGCATGACAATCCTGATAA...CACAGCTTTTGAAGCCACTGGAATCTGTAGGGAAAGACACCAGAGAAGAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CCA 90 bp CATATACCTGTTCTTGCATCCCATATAGACAGGGTCTTGTCTGCAGAGCTTGTGATTTGTTTTGTTCCCTaGCTTCACGAAGACCTTTCT +
Preference number: 4 (lower is better)
Translates to: HIPVLASHIDRVLSAELVICFVP*LHEDLS
Trigger: AGAAAGGTCTTCGTGAAGCCAGGGAACAAAACAAAT...CACAAGCTCTGCAGACAAGACCCTGTCTATATGGGATGCAAGAACAGGTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp AGTGTGGCCAAATCCCGTGAGAAGCACATTGCATTTTGGAAGGCCCAACACCTTCTCACTGGAAGTTCATaGAGTCTAAAAATGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SVAKSREKHIAFWKAQHLLTGSS*SLKMFF
Trigger: GAAAAACATTTTTAGACTCCATGAACTTCCAGTGAG...AAGGTGTTGGGCCTTCCAAAATGCAATGTGCTTCTCACGGGATTTGGCCACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp GCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTCTTTGTGGGGTTGCATaGAGACACAGCTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: ACFKADCKCYLLAHLTSSLCGVA*RHSSLE
Trigger: TTCCAGTGAGCTGTGTCTCCATGCAACCCCACAAAG...AGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp TTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTATAGTCGGTTCACTCATTGCCAGGACTTaGACCTATATCGATGGACAC +
Preference number: 4 (lower is better)
Translates to: FSFSKVWCFSCNTLIVGSLIART*TYIDGH
Trigger: GTGTCCATCGATATAGGTCCAAGTCCTGGCAATGAG...TGAACCGACTATAAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp GCATGGCCAGATTTGCAATGTTTCGCATCACTACTTAACTTCTACAATCTCTGGCCACAAAGCTCAGTTTaGAACTTTCCACAGACCCAA +
Preference number: 4 (lower is better)
Translates to: AWPDLQCFASLLNFYNLWPQSSV*NFPQTQ
Trigger: TTGGGTCTGTGGAAAGTTCCAAACTGAGCTTTGTGG...CCAGAGATTGTAGAAGTTAAGTAGTGATGCGAAACATTGCAAATCTGGCCATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CCA 90 bp TATCAGGATTGTCATGCTCTTATTGGCTTCCATCTCCACAAAGCTCAGTTTGGATGCAGCTCTCTTCTCTaGTGTCTTTCCCTACAGATT +
Preference number: 4 (lower is better)
Translates to: YQDCHALIGFHLHKAQFGCSSLL*CLSLQI
Trigger: AATCTGTAGGGAAAGACACCAGAGAAGAGAGCTGCA...TCCAAACTGAGCTTTGTGGAGATGGAAGCCAATAAGAGCATGACAATCCTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CCA 90 bp CTGGTGTCTTTCCCTACAGATTCCAGTGGCTTCAAAAGCTGTGAACTAGGGTCTTGTAAGCTTTGTTCCTaGTTTTATAAGGCGGATATG +
Preference number: 4 (lower is better)
Translates to: LVSFPTDSSGFKSCELGSCKLCS*FYKADM
Trigger: CATATCCGCCTTATAAAACCAGGAACAAAGCTTACA...AGACCCTAGTTCACAGCTTTTGAAGCCACTGGAATCTGTAGGGAAAGACACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CCA 90 bp TCAGGATTGTCATGCTCTTATTGGCTTCCATCTCCACAAAGCTCAGTTTGGAACGTTAGGGTGGATCCATaGAAAGCCCTAAATGTTTCT +
Preference number: 4 (lower is better)
Translates to: SGLSCSYWLPSPQSSVWNVRVDP*KALNVS
Trigger: AGAAACATTTAGGGCTTTCCATGGATCCACCCTAAC...GTTCCAAACTGAGCTTTGTGGAGATGGAAGCCAATAAGAGCATGACAATCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CCA 90 bp TGTCATGCTCTTATTGGCTTCCATCTCCACAAAGCTCAGTTTGGAACTTTCCACAGGCAGTTCCATTTTTaGCTGATGACCCTAAAATCC +
Preference number: 4 (lower is better)
Translates to: CHALIGFHLHKAQFGTFHRQFHF*LMTLKS
Trigger: GGATTTTAGGGTCATCAGCCAAAAATGGAACTGCCT...GTGGAAAGTTCCAAACTGAGCTTTGTGGAGATGGAAGCCAATAAGAGCATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR CAA 72 bp GACCTGATGAATCAAAATTCACCTCATTGCCAGGACTaGGACCTATATCGATGGACACAATTGGTAACAGCT +
Preference number: 4 (lower is better)
Translates to: DLMNQNSPHCQD*DLYRWTQLVTA
Trigger: AGCTGTTACCAATTGTGTCCATCGATATAGGTCCAAGTCCTGGCAATGAGGTGAATTTTGATTCATCAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406979.6
3UTR CAA 72 bp TGTGAAAGAGGTCTTTCCACCCAGGCATGGCCAGATTaGCAATGTTTCGCATCACTACTTAACTTCTACAAT +
Preference number: 4 (lower is better)
Translates to: CERGLSTQAWPD*QCFASLLNFYN
Trigger: ATTGTAGAAGTTAAGTAGTGATGCGAAACATTGCAAATCTGGCCATGCCTGGGTGGAAAGACCTCTTTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR TCA 90 bp GAGGTCAGCATTTTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTAGTTTTGTGCTGCTTTaGGAATGCTGGATTAGAGGT +
Preference number: 4 (lower is better)
Translates to: EVSIFSFSKVWCFSCNTLSFVLL*ECWIRG
Trigger: ACCTCTAATCCAGCATTCTCAAAGCAGCACAAAACT...AAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAAAATGCTGACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR GCA 90 bp GCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGATAGTCATCTTCAGATaGTTCAGTTATGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: ADCKCYLLAHLTSSLLVWIVIFR*FSYGDL
Trigger: CAGGTCACCATAACTGAAGCATCTGAAGATGACTAT...CCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331683.10
CDS-3UTR GCA 90 bp AGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCATAGTCATCTTCAGATaGTTCAGTTATGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: SICSLFLGHLNCFCQIFFIVIFR*FSYGDL
Trigger: CAGGTCACCATAACTGAAGCATCTGAAGATGACTAT...GAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420497.6
ENST00000452556.5
CDS-3UTR GCA 90 bp TTCAGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCCATCTGAATTGCTTTTaGCAGATCTTCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: FSICSLFLGHLNCFCQIFHLNCF*QIFFTF
Trigger: GAAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATG...GAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000420497.6
ENST00000452556.5
CDS-3UTR GCA 90 bp GACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGGACTCTAGCTTTGTCAGCTaGTTGTTTGTAGTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: DCKCYLLAHLTSSLLVWDSSFVS*LFVVLQ
Trigger: TTGAAGCACTACAAACAAGCAGCTGACAAAGCTAGA...GTCCCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR GCA 90 bp TCCAAAGCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCATGTCTTTGTGGGGTTaGATGGAGACACAGCTCACT +
Preference number: 4 (lower is better)
Translates to: SKACFKADCKCYLLAHLTMSLWG*METQLT
Trigger: AGTGAGCTGTGTCTCCATGCAACCCCACAAAGACAT...GGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGCTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR GCA 90 bp TTCAGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCCAAAATTCACCTCATTaGCAGGACTTGGACCTATAT +
Preference number: 4 (lower is better)
Translates to: FSICSLFLGHLNCFCQIFQNSPH*QDLDLY
Trigger: ATATAGGTCCAAGTCCTGGCAATGAGGTGAATTTTG...GAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR GCA 90 bp AGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCTATGTATTCAGATTGTaGAGTCCTACCATTGGCAAC +
Preference number: 4 (lower is better)
Translates to: SICSLFLGHLNCFCQIFFYVFRL*SPTIGN
Trigger: GTTGCCAATGGTAGGACTGCACAATCTGAATACATA...GAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR GCA 90 bp AATGCATGTGACCATAAAGTGACTGCTCACATATACCTGTTCTTGCATCCCATAGCACTTTGGGAGGATTaGTTGAGGACAGGAATTTGT +
Preference number: 4 (lower is better)
Translates to: NACDHKVTAHIYLFLHPIALWED*LRTGIC
Trigger: ACAAATTCCTGTCCTCAAGCAATCCTCCCAAAGTGC...TATGGGATGCAAGAACAGGTATATGTGAGCAGTCACTTTATGGTCACATGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CCA 90 bp GTTCCTGGTTTTATAAGGCGGATATGGGATGCTGAATGTTACTGTGTTGTTAACCTGGGTGTAGACATCTaGAACATTCCCAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: VPGFIRRIWDAECYCVVNLGVDI*NIPNSS
Trigger: AGAACTGTTGGGAATGTTCCAGATGTCTACACCCAG...GTTAACAACACAGTAACATTCAGCATCCCATATCCGCCTTATAAAACCAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CCA 90 bp TCACATATACCTGTTCTTGCATCCCATATAGACAGGGTCTTGTCTGCAGAGCTTATTTGTTTTGTTCCCTaGCTTCACGAAGACCTTTCT +
Preference number: 4 (lower is better)
Translates to: SHIPVLASHIDRVLSAELICFVP*LHEDLS
Trigger: AGAAAGGTCTTCGTGAAGCCAGGGAACAAAACAAAT...AAGCTCTGCAGACAAGACCCTGTCTATATGGGATGCAAGAACAGGTATATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp ATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCACCTTCAGGATTAGTTTGTaGGCAACTGCTTTTATCTCT +
Preference number: 4 (lower is better)
Translates to: ICSLFLGHLNCFCQIFFTFRISL*ATAFIS
Trigger: AGAGATAAAAGCAGTTGCCCACAAACTAATCCTGAA...GGTGAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000420497.6
CDS-3UTR CCA 90 bp CATGGCCAGATTTGCAATGTTTCGCATCACTACTTAACTTCTACAATCTCTGGCTTGTCATGCTCTTATTaGCTTCCATCTCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: HGQICNVSHHYLTSTISGLSCSY*LPSPQS
Trigger: GCTTTGTGGAGATGGAAGCCAATAAGAGCATGACAA...GCCAGAGATTGTAGAAGTTAAGTAGTGATGCGAAACATTGCAAATCTGGCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR CAA 72 bp GCTAAAACTCGACCTGATGAATCAAAATTCACCTCATaGCCAGGACTTGGACCTATATCGATGGACACAATT +
Preference number: 4 (lower is better)
Translates to: AKTRPDESKFTS*PGLGPISMDTI
Trigger: AATTGTGTCCATCGATATAGGTCCAAGTCCTGGCAATGAGGTGAATTTTGATTCATCAGGTCGAGTTTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR TCA 90 bp CGAACCTACATATCATTATCACCCAAAGTCCACAGTTTATATTATTCCTTCTGGATGCTTCAGTTATGGTaGCCTGTTCCAGGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: RTYISLSPKVHSLYYSFWMLQLW*PVPGSR
Trigger: CCTACTACCTGGAACAGGTCACCATAACTGAAGCAT...CCAGAAGGAATAATATAAACTGTGGACTTTGGGTGATAATGATATGTAGGTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR TCA 90 bp GTCAGCATTTTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTATATGTTCTTGGGCCATCTaGATTGCTTTTGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: VSIFSFSKVWCFSCNTLICSWAI*IAFARS
Trigger: AGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACA...TATAAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAAAATGCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000440779.5
ENST00000452556.5
CDS-3UTR TCA 90 bp GCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTGTCTGCAGAGCTTGTaGGAAGAGTATTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ACFKADCKCYLLAHLTSSCLQSL*EEYWRK
Trigger: CTTTCTCCAATACTCTTCTCACAAGCTCTGCAGACA...AGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR TCA 90 bp TTGTCATGCTCTTATTGGCTTCCATCTCCACAAAGCTCAGTTTGGAACTTTCCATCTCTGGCCTCCTCTTaGTCCTATATAATTGTATCT +
Preference number: 4 (lower is better)
Translates to: LSCSYWLPSPQSSVWNFPSLASS*SYIIVS
Trigger: AGATACAATTATATAGGATCAAGAGGAGGCCAGAGA...TGGAAAGTTCCAAACTGAGCTTTGTGGAGATGGAAGCCAATAAGAGCATGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR GCA 90 bp CATGGCCAGATTTGCAATGTTTCGCATCACTACTTAACTTCTACAATCTCTGGCCATCTGAATTGCTTTTaGCAGATCTTCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: HGQICNVSHHYLTSTISGHLNCF*QIFFTF
Trigger: GAAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATG...GCCAGAGATTGTAGAAGTTAAGTAGTGATGCGAAACATTGCAAATCTGGCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR GCA 90 bp CACAGAATCTGTATGTCCATACAAAGTACATCTGCATCTTTCACTATTAACATCAAACACAACCGTGTGTaGCTCGTTTTCGTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: HRICMSIQSTSASFTINIKHNRV*LVFVAH
Trigger: ATGGGCCACGAAAACGAGGCACACACGGTTGTGTTT...GATGTTAATAGTGAAAGATGCAGATGTACTTTGTATGGACATACAGATTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR GCA 90 bp TTGTGGGGTTGCATGGAGACACAGCTCACTGGAAGTTCATGGAGTCTAAAAATGTTGGAAGGTAAAGGTTaGCAAATAAAAGTAGTCCAT +
Preference number: 4 (lower is better)
Translates to: LWGCMETQLTGSSWSLKMLEGKG*QIKVVH
Trigger: ATGGACTACTTTTATTTGGCAACCTTTACCTTCCAA...CATTTTTAGACTCCATGAACTTCCAGTGAGCTGTGTCTCCATGCAACCCCACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CCA 90 bp GAGGTCAGCATTTTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTTCCTTCAGTAAAGTGTaGTGTTTCTCATGTAACACC +
Preference number: 4 (lower is better)
Translates to: EVSIFSFSKVWCFSCNTLSFSKV*CFSCNT
Trigger: GGTGTTACATGAGAAACACCACACTTTACTGAAGGA...AAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAAAATGCTGACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000440779.5
ENST00000452556.5
CDS-3UTR CCA 90 bp GTCAGCATTTTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTATAGGAGACACAGCTCACTaGAAGTTCATGGAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: VSIFSFSKVWCFSCNTLIGDTAH*KFMESK
Trigger: TTTAGACTCCATGAACTTCCAGTGAGCTGTGTCTCC...TATAAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAAAATGCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp CTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATTTTCAGCACTTTGTGGGGTTGCATaGAGACACAGCTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: LFAYDAFDENHVLSEFSALCGVA*RHSSLE
Trigger: TTCCAGTGAGCTGTGTCTCCATGCAACCCCACAAAG...TGCTGAAAATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp GCTGGAGAAAGACTTTCTTTAGAAACATTCAGGTTTGGATTTGGTTGCATATCTACTAGGATGTCTTTGTaGGGTTGCATGGAGACACAG +
Preference number: 4 (lower is better)
Translates to: AGERLSLETFRFGFGCISTRMSL*GCMETQ
Trigger: CTGTGTCTCCATGCAACCCCACAAAGACATCCTAGT...AGATATGCAACCAAATCCAAACCTGAATGTTTCTAAAGAAAGTCTTTCTCCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp GCTGGAGAAAGACTTTCTTTAGAAACATTCAGGTTTGGATTTGGTTGCATATCTCTCATTGCCAGGACTTaGACCTATATCGATGGACAC +
Preference number: 4 (lower is better)
Translates to: AGERLSLETFRFGFGCISLIART*TYIDGH
Trigger: GTGTCCATCGATATAGGTCCAAGTCCTGGCAATGAG...AGATATGCAACCAAATCCAAACCTGAATGTTTCTAAAGAAAGTCTTTCTCCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp TCAGGATTGTCATGCTCTTATTGGCTTCCATCTCCACAAAGCTCAGTTTGGAACGCTAAAATTGTCATCTaGTATCTTGAAGTCCAACAG +
Preference number: 4 (lower is better)
Translates to: SGLSCSYWLPSPQSSVWNAKIVI*YLEVQQ
Trigger: CTGTTGGACTTCAAGATACCAGATGACAATTTTAGC...GTTCCAAACTGAGCTTTGTGGAGATGGAAGCCAATAAGAGCATGACAATCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CCA 90 bp CTACTTAAGGGTAGGTTTCCATTTATTGCTTGTTGTCTTGATTATGGGTCACATCTTTCCACCCAGGCATaGCCAGATTTGCAATGTTTC +
Preference number: 4 (lower is better)
Translates to: LLKGRFPFIACCLDYGSHLSTQA*PDLQCF
Trigger: GAAACATTGCAAATCTGGCCATGCCTGGGTGGAAAG...ATGTGACCCATAATCAAGACAACAAGCAATAAATGGAAACCTACCCTTAAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CCA 90 bp TCAAATAGGAGTTTTATGGTGAACAGCCAAGTGTGGCAATTGAATGCCAGTTTTGGATTAGAGGTGATATaGACAAGACTTTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: SNRSFMVNSQVWQLNASFGLEVI*TRLSTR
Trigger: CCTGGTGGAAAGTCTTGTCCATATCACCTCTAATCC...AAAACTGGCATTCAATTGCCACACTTGGCTGTTCACCATAAAACTCCTATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR TCA 90 bp ACTATGATCAACTTTAATTTGAGGACCATGGTAACTATGTCCTCTTTGCAGTTTATGCTTCAGTTATGGTaGCCTGTTCCAGGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: TMINFNLRTMVTMSSLQFMLQLW*PVPGSR
Trigger: CCTACTACCTGGAACAGGTCACCATAACTGAAGCAT...AAACTGCAAAGAGGACATAGTTACCATGGTCCTCAAATTAAAGTTGATCATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440779.5
ENST00000452556.5
CDS-3UTR TCA 90 bp GTTCCTGGTTTTATAAGGCGGATATGGGATGCTGAATGTTACTGTGTTGTTAACTCATACCATTCAGACTaGAAGCAATCAAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VPGFIRRIWDAECYCVVNSYHSD*KQSRVL
Trigger: CAGAACTCTTGATTGCTTTCAGTCTGAATGGTATGA...GTTAACAACACAGTAACATTCAGCATCCCATATCCGCCTTATAAAACCAGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR TCA 90 bp ACTATGATCAACTTTAATTTGAGGACCATGGTAACTATGTCCTCTTTGCAGTTTTGTAGTGTCACCACTTaGAGTAGCCAATTTGTCGCC +
Preference number: 4 (lower is better)
Translates to: TMINFNLRTMVTMSSLQFCSVTT*SSQFVA
Trigger: GGCGACAAATTGGCTACTTCAAGTGGTGACACTACA...AAACTGCAAAGAGGACATAGTTACCATGGTCCTCAAATTAAAGTTGATCATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR TCA 90 bp GGTATAATGACCAGAAGCAGAAGTCCTTCCATTATAGTTGACTTGTTTTTCTCTGTTGTTAACAAGGTGTaGAAGAGGTCTTTCCACCCA +
Preference number: 4 (lower is better)
Translates to: GIMTRSRSPSIIVDLFFSVVNKV*KRSFHP
Trigger: TGGGTGGAAAGACCTCTTTCACACCTTGTTAACAAC...AGAGAAAAACAAGTCAACTATAATGGAAGGACTTCTGCTTCTGGTCATTATACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR TCA 90 bp ATTGGTGAACATCTCCCATGTACCAGGTACCATGAAAGGTGCAAAATTTCAGTAATGTACCAGGTACCATaGAAGGTGCAAAATTTCAGT +
Preference number: 4 (lower is better)
Translates to: IGEHLPCTRYHERCKISVMYQVP*KVQNFS
Trigger: ACTGAAATTTTGCACCTTTCATGGTACCTGGTACAT...TACTGAAATTTTGCACCTTTCATGGTACCTGGTACATGGGAGATGTTCACCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420497.6
CDS-3UTR TCA 90 bp ACTATGATCAACTTTAATTTGAGGACCATGGTAACTATGTCCTCTTTGCAGTTTTGGGAAGACACCAGTTaGTTTCTGTGGTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: TMINFNLRTMVTMSSLQFWEDTS*FLWSFP
Trigger: AGGAAAGGACCACAGAAATCAACTGGTGTCTTCCCA...AAACTGCAAAGAGGACATAGTTACCATGGTCCTCAAATTAAAGTTGATCATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR GCA 90 bp CTGACATTTCCAATTATCAGGATTGTCATGCTCTTATTGGCTTCCATCTCCACATCTAGCTTTGTCAGCTaGTTGTTTGTAGTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: LTFPIIRIVMLLLASISTSSFVS*LFVVLQ
Trigger: TTGAAGCACTACAAACAAGCAGCTGACAAAGCTAGA...TGTGGAGATGGAAGCCAATAAGAGCATGACAATCCTGATAATTGGAAATGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR GCA 90 bp CACAGAATCTGTATGTCCATACAAAGTACATCTGCATCTTTCACTATTAACATCATGTCTTTGTGGGGTTaGATGGAGACACAGCTCACT +
Preference number: 4 (lower is better)
Translates to: HRICMSIQSTSASFTINIMSLWG*METQLT
Trigger: AGTGAGCTGTGTCTCCATGCAACCCCACAAAGACAT...GATGTTAATAGTGAAAGATGCAGATGTACTTTGTATGGACATACAGATTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR GCA 90 bp GCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGCTTCAAAGGTCAAAATaGAATCGCCTTTACATAGAT +
Preference number: 4 (lower is better)
Translates to: ADCKCYLLAHLTSSLLVWLQRSK*NRLYID
Trigger: ATCTATGTAAAGGCGATTGCATTTTGACCTTTGAAG...CCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR GCA 90 bp CCTGAGCTAAAACTCGACCTGATGAATCAAAATTCACCTCATTGCCAGGACTTGCTTCAAAGGTCAAAATaGAATCGCCTTTACATAGAT +
Preference number: 4 (lower is better)
Translates to: PELKLDLMNQNSPHCQDLLQRSK*NRLYID
Trigger: ATCTATGTAAAGGCGATTGCATTTTGACCTTTGAAG...CAAGTCCTGGCAATGAGGTGAATTTTGATTCATCAGGTCGAGTTTTAGCTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR GCA 90 bp CTACTTAAGGGTAGGTTTCCATTTATTGCTTGTTGTCTTGATTATGGGTCACATAGGCATGGCCAGATTTaGAATGTTTCGCATCACTAC +
Preference number: 4 (lower is better)
Translates to: LLKGRFPFIACCLDYGSHRHGQI*NVSHHY
Trigger: GTAGTGATGCGAAACATTGCAAATCTGGCCATGCCT...ATGTGACCCATAATCAAGACAACAAGCAATAAATGGAAACCTACCCTTAAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR GCA 90 bp GTTCCTGGTTTTATAAGGCGGATATGGGATGCTGAATGTTACTGTGTTGTTAACCTAGGCTTAATTTTATaGTTCGTTAGGGTGGATCCA +
Preference number: 4 (lower is better)
Translates to: VPGFIRRIWDAECYCVVNLGLIL*FVRVDP
Trigger: TGGATCCACCCTAACGAAGCATAAAATTAAGCCTAG...GTTAACAACACAGTAACATTCAGCATCCCATATCCGCCTTATAAAACCAGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CCA 90 bp TTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATCTGGGTGTAGACATCTaGAACATTCCCAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: FLDYSLMMHSMKITFFLNLGVDI*NIPNSS
Trigger: AGAACTGTTGGGAATGTTCCAGATGTCTACACCCAG...ATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000440779.5
CDS-3UTR CCA 90 bp CAATTATCAGGATTGTCATGCTCTTATTGGCTTCCATCTCCACAAAGCTCAGTTTCCTTCAGTAAAGTGTaGTGTTTCTCATGTAACACC +
Preference number: 4 (lower is better)
Translates to: QLSGLSCSYWLPSPQSSVSFSKV*CFSCNT
Trigger: GGTGTTACATGAGAAACACCACACTTTACTGAAGGA...AACTGAGCTTTGTGGAGATGGAAGCCAATAAGAGCATGACAATCCTGATAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CCA 90 bp TTCAGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCATTCAGGTTTGGATTTaGTTGCATATCTATGGGAAA +
Preference number: 4 (lower is better)
Translates to: FSICSLFLGHLNCFCQIFIQVWI*LHIYGK
Trigger: TTTCCCATAGATATGCAACCAAATCCAAACCTGAAT...GAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp AGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCCTCACTGGAAGTTCATaGAGTCTAAAAATGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SICSLFLGHLNCFCQIFFLTGSS*SLKMFF
Trigger: GAAAAACATTTTTAGACTCCATGAACTTCCAGTGAG...GAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp ATGTCCAAAGCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAGGAGACACAGCTCACTaGAAGTTCATGGAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: MSKACFKADCKCYLLAHLGDTAH*KFMESK
Trigger: TTTAGACTCCATGAACTTCCAGTGAGCTGTGTCTCC...TAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGCTTTGGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp GCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTCTATCATGTGACCCCTaGGATCAAAAATGGCATCAT +
Preference number: 4 (lower is better)
Translates to: ACFKADCKCYLLAHLTSSLSCDP*DQKWHH
Trigger: ATGATGCCATTTTTGATCCCAGGGGTCACATGATAG...AGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp CTGAAAGCAATCAAGAGTTCTGGTCATTCCCATTTTGATCAAGAAATTGCAGAGAGTTCTTTGCTGGTTTaGGACTACAGGAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: LKAIKSSGHSHFDQEIAESSLLV*DYRRHF
Trigger: AAAATGCCTCCTGTAGTCCCAAACCAGCAAAGAACT...CTCTGCAATTTCTTGATCAAAATGGGAATGACCAGAACTCTTGATTGCTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR CCA 90 bp AATTTCAGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCATATCTTTACGGAGATaGTTGTTTATCCATCCACCA +
Preference number: 4 (lower is better)
Translates to: NFSICSLFLGHLNCFCQIISLRR*LFIHPP
Trigger: TGGTGGATGGATAAACAACCATCTCCGTAAAGATAT...GATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACTGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
3UTR CAA 72 bp CTGACATTTCCAATTATCAGGATTGTCATGCTCTTATaGGCTTCCATCTCCACAAAGCTCAGTTTGGAACTT +
Preference number: 4 (lower is better)
Translates to: LTFPIIRIVMLL*ASISTKLSLEL
Trigger: AAGTTCCAAACTGAGCTTTGTGGAGATGGAAGCCAATAAGAGCATGACAATCCTGATAATTGGAAATGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR CAA 72 bp TCTTGTAAGTGTCAGGTAGTGTTGTTATGTATAGTATaGCAGCCTCAGCTAAGGACTCATAGTAAACTCCCT +
Preference number: 4 (lower is better)
Translates to: SCKCQVVLLCIV*QPQLRTHSKLP
Trigger: AGGGAGTTTACTATGAGTCCTTAGCTGAGGCTGCAATACTATACATAACAACACTACCTGACACTTACAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR CAA 72 bp TTTCTGATGAATCAAAATTCACCTCATTGCCAGGACTaGGACCTATATCGATGGACACAATTGGTAACAGCT +
Preference number: 4 (lower is better)
Translates to: FLMNQNSPHCQD*DLYRWTQLVTA
Trigger: AGCTGTTACCAATTGTGTCCATCGATATAGGTCCAAGTCCTGGCAATGAGGTGAATTTTGATTCATCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR TCA 90 bp AACCTACATATCATTATCACCCAAAGTCCACAGTTTATATTATTCCTTCTGGAGTGTTCTTGGGCCATCTaGATTGCTTTTGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: NLHIIITQSPQFILFLLECSWAI*IAFARS
Trigger: AGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACA...CTCCAGAAGGAATAATATAAACTGTGGACTTTGGGTGATAATGATATGTAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR TCA 90 bp GACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATTTTCAGTGTTCTTGGGCCATCTaGATTGCTTTTGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: DYSLMMHSMKITFFLNFQCSWAI*IAFARS
Trigger: AGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACA...CTGAAAATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000440779.5
ENST00000452556.5
CDS-3UTR CCA 90 bp GCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTCCTTCAGTAAAGTGTaGTGTTTCTCATGTAACACC +
Preference number: 4 (lower is better)
Translates to: ACFKADCKCYLLAHLTSSSFSKV*CFSCNT
Trigger: GGTGTTACATGAGAAACACCACACTTTACTGAAGGA...AGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp AGCATTTTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTATAGTCTCCTTCAGTAAAGTGTaGTGTTTCTCATGTAACACC +
Preference number: 4 (lower is better)
Translates to: SIFSFSKVWCFSCNTLIVSFSKV*CFSCNT
Trigger: GGTGTTACATGAGAAACACCACACTTTACTGAAGGA...GACTATAAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAAAATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000440779.5
ENST00000452556.5
CDS-3UTR CCA 90 bp GTGCAAAATTTCAGTATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCGCTAAAATTGTCATCTaGTATCATGTCATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VQNFSICSLFLGHLNCFCAKIVI*YHVILK
Trigger: CTTCAGAATGACATGATACCAGATGACAATTTTAGC...GCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACTGAAATTTTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420497.6
CDS-3UTR CCA 90 bp GTTCCTGGTTTTATAAGGCGGATATGGGATGCTGAATGTTACTGTGTTGTTAACTTTATAAGGCGGATATaGGATGCTGAATGTTACTGT +
Preference number: 4 (lower is better)
Translates to: VPGFIRRIWDAECYCVVNFIRRI*DAECYC
Trigger: ACAGTAACATTCAGCATCCCATATCCGCCTTATAAA...GTTAACAACACAGTAACATTCAGCATCCCATATCCGCCTTATAAAACCAGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR CAA 72 bp AGGAATGTAGAAACATTCAGTCTTCTGAAGACAGTTTaGTGCTGCTTTGAGAATGCTGGATTAGAGGTGATA +
Preference number: 4 (lower is better)
Translates to: RNVETFSLLKTV*CCFENAGLEVI
Trigger: TATCACCTCTAATCCAGCATTCTCAAAGCAGCACAAAACTGTCTTCAGAAGACTGAATGTTTCTACATTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR TCA 90 bp GCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTGGTCATTCCCATTTTaGTCAAGAAATTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: ACFKADCKCYLLAHLTSSWSFPF*SRNCRE
Trigger: TTCTCTGCAATTTCTTGATCAAAATGGGAATGACCA...AGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR TCA 90 bp TTTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAAATGCTTCAGTTATGGTaGCCTCTGAATATCTTGTCA +
Preference number: 4 (lower is better)
Translates to: FPGLFAYDAFDENHVLSEMLQLW*PLNILS
Trigger: TGACAAGATATTCAGAGGTCACCATAACTGAAGCAT...TTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR TCA 90 bp TTTATTCAACATATAATTGGTGAACATCTCCCATGTACCAGGTACCATGAAAGGTCAACATATAATTGGTaGACATCTCCCATGTACCAG +
Preference number: 4 (lower is better)
Translates to: FIQHIIGEHLPCTRYHERSTYNW*TSPMYQ
Trigger: CTGGTACATGGGAGATGTTCACCAATTATATGTTGA...CCTTTCATGGTACCTGGTACATGGGAGATGTTCACCAATTATATGTTGAATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420497.6
CDS-3UTR GCA 90 bp CGAACCTACATATCATTATCACCCAAAGTCCACAGTTTATATTATTCCTTCTGGATAGTCATCTTCAGATaGTTCAGTTATGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: RTYISLSPKVHSLYYSFWIVIFR*FSYGDL
Trigger: CAGGTCACCATAACTGAAGCATCTGAAGATGACTAT...CCAGAAGGAATAATATAAACTGTGGACTTTGGGTGATAATGATATGTAGGTTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR GCA 90 bp TTTTTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGATAGTCATCTTCAGATaGTTCAGTTATGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: FFLDYSLMMHSMKITFFLIVIFR*FSYGDL
Trigger: CAGGTCACCATAACTGAAGCATCTGAAGATGACTAT...CAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440779.5
ENST00000452556.5
CDS-3UTR GCA 90 bp TTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATATAGTCATCTTCAGATaGTTCAGTTATGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: FLDYSLMMHSMKITFFLNIVIFR*FSYGDL
Trigger: CAGGTCACCATAACTGAAGCATCTGAAGATGACTAT...ATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440779.5
ENST00000452556.5
CDS-3UTR GCA 90 bp TTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATTCTAGCTTTGTCAGCTaGTTGTTTGTAGTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: FLDYSLMMHSMKITFFLNSSFVS*LFVVLQ
Trigger: TTGAAGCACTACAAACAAGCAGCTGACAAAGCTAGA...ATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000440779.5
CDS-3UTR GCA 90 bp ATGTCCAAAGCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACATATACCTGTTCTTaGATCCCATATAGACAGGGT +
Preference number: 4 (lower is better)
Translates to: MSKACFKADCKCYLLAHLTYTCS*IPYRQG
Trigger: ACCCTGTCTATATGGGATGCAAGAACAGGTATATGT...TAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGCTTTGGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR GCA 90 bp TTTTTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGACATATACCTGTTCTTaGATCCCATATAGACAGGGT +
Preference number: 4 (lower is better)
Translates to: FFLDYSLMMHSMKITFFLTYTCS*IPYRQG
Trigger: ACCCTGTCTATATGGGATGCAAGAACAGGTATATGT...CAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR GCA 90 bp TGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCAAAATTCACCTCATTaGCAGGACTTGGACCTATAT +
Preference number: 4 (lower is better)
Translates to: CFKADCKCYLLAHLTSSLQNSPH*QDLDLY
Trigger: ATATAGGTCCAAGTCCTGGCAATGAGGTGAATTTTG...CAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp ATGTCCAAAGCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAATTTGTTTTGTTCCCTaGCTTCACGAAGACCTTTCT +
Preference number: 4 (lower is better)
Translates to: MSKACFKADCKCYLLAHLICFVP*LHEDLS
Trigger: AGAAAGGTCTTCGTGAAGCCAGGGAACAAAACAAAT...TAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGCTTTGGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp ACTATGATCAACTTTAATTTGAGGACCATGGTAACTATGTCCTCTTTGCAGTTTCTATCATGTGACCCCTaGGATCAAAAATGGCATCAT +
Preference number: 4 (lower is better)
Translates to: TMINFNLRTMVTMSSLQFLSCDP*DQKWHH
Trigger: ATGATGCCATTTTTGATCCCAGGGGTCACATGATAG...AAACTGCAAAGAGGACATAGTTACCATGGTCCTCAAATTAAAGTTGATCATAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
3UTR CAA 72 bp CATCACTACTTAACTTCTACAATCTCTGGCCTCCTCTaGATCCTATATAATTGTATCTCTCTTGTAAGTGTC +
Preference number: 4 (lower is better)
Translates to: HHYLTSTISGLL*ILYNCISLVSV
Trigger: GACACTTACAAGAGAGATACAATTATATAGGATCAAGAGGAGGCCAGAGATTGTAGAAGTTAAGTAGTGATG
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
3UTR CAA 72 bp CTGATTAAAATGCAATTACAGTGTTGCTGTATGAACTaGGCACTACTATTGAATGAACCCATTAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: LIKMQLQCCCMN*ALLLNEPINAG
Trigger: CCCAGCATTAATGGGTTCATTCAATAGTAGTGCCAAGTTCATACAGCAACACTGTAATTGCATTTTAATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR TCA 90 bp GACGAACCTACATATCATTATCACCCAAAGTCCACAGTTTATATTATTCCTTCTTCATACCATTCAGACTaGAAGCAATCAAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: DEPTYHYHPKSTVYIIPSSYHSD*KQSRVL
Trigger: CAGAACTCTTGATTGCTTTCAGTCTGAATGGTATGA...AGAAGGAATAATATAAACTGTGGACTTTGGGTGATAATGATATGTAGGTTCGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR GCA 90 bp AACCTACATATCATTATCACCCAAAGTCCACAGTTTATATTATTCCTTCTGGAGCATCTGAATTGCTTTTaGCAGATCTTCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: NLHIIITQSPQFILFLLEHLNCF*QIFFTF
Trigger: GAAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATG...CTCCAGAAGGAATAATATAAACTGTGGACTTTGGGTGATAATGATATGTAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR GCA 90 bp CTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATTTTCAGCACATCTGAATTGCTTTTaGCAGATCTTCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: LFAYDAFDENHVLSEFSAHLNCF*QIFFTF
Trigger: GAAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATG...TGCTGAAAATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000440779.5
ENST00000452556.5
CDS-3UTR CCA 90 bp ACTATGATCAACTTTAATTTGAGGACCATGGTAACTATGTCCTCTTTGCAGTTTTTGGACCTATATCGATaGACACAATTGGTAACAGCT +
Preference number: 4 (lower is better)
Translates to: TMINFNLRTMVTMSSLQFLDLYR*TQLVTA
Trigger: AGCTGTTACCAATTGTGTCCATCGATATAGGTCCAA...AAACTGCAAAGAGGACATAGTTACCATGGTCCTCAAATTAAAGTTGATCATAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp GACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATTTTCAGTTGGACCTATATCGATaGACACAATTGGTAACAGCT +
Preference number: 4 (lower is better)
Translates to: DYSLMMHSMKITFFLNFQLDLYR*TQLVTA
Trigger: AGCTGTTACCAATTGTGTCCATCGATATAGGTCCAA...CTGAAAATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp GTCAGCATTTTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTATATTAAGATCTAGCAAATaGATAACACCATTGCCACTT +
Preference number: 4 (lower is better)
Translates to: VSIFSFSKVWCFSCNTLILRSSK*ITPLPL
Trigger: AAGTGGCAATGGTGTTATCCATTTGCTAGATCTTAA...TATAAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAAAATGCTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR TCA 90 bp AGAAAGACTTTCTTTAGAAACATTCAGGTTTGGATTTGGTTGCATATCTATGGGTGGTCATTCCCATTTTaGTCAAGAAATTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: RKTFFRNIQVWIWLHIYGWSFPF*SRNCRE
Trigger: TTCTCTGCAATTTCTTGATCAAAATGGGAATGACCA...CCCATAGATATGCAACCAAATCCAAACCTGAATGTTTCTAAAGAAAGTCTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR TCA 90 bp CCTACATATCATTATCACCCAAAGTCCACAGTTTATATTATTCCTTCTGGAGAATGGTCATTCCCATTTTaGTCAAGAAATTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: PTYHYHPKSTVYIIPSGEWSFPF*SRNCRE
Trigger: TTCTCTGCAATTTCTTGATCAAAATGGGAATGACCA...TTCTCCAGAAGGAATAATATAAACTGTGGACTTTGGGTGATAATGATATGTAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR TCA 90 bp CTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATTTTCAGCATTGGCAACTTCAATTTaGGGTAACATCAAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LFAYDAFDENHVLSEFSALATSI*GNIKKA
Trigger: AGCTTTCTTGATGTTACCTCAAATTGAAGTTGCCAA...TGCTGAAAATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR GCA 90 bp TTTTTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGCTTCAAAGGTCAAAATaGAATCGCCTTTACATAGAT +
Preference number: 4 (lower is better)
Translates to: FFLDYSLMMHSMKITFFLLQRSK*NRLYID
Trigger: ATCTATGTAAAGGCGATTGCATTTTGACCTTTGAAG...CAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CCA 90 bp ATGTCCAAAGCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTATTGGTTGCATATCTATaGGAAATTCTGAATCCTTTG +
Preference number: 4 (lower is better)
Translates to: MSKACFKADCKCYLLAHLLVAYL*EILNPL
Trigger: CAAAGGATTCAGAATTTCCCATAGATATGCAACCAA...TAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGCTTTGGACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CCA 90 bp ATGTCCAAAGCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTACTCACTGGAAGTTCATaGAGTCTAAAAATGTTTTTC +
Preference number: 4 (lower is better)
Translates to: MSKACFKADCKCYLLAHLLTGSS*SLKMFF
Trigger: GAAAAACATTTTTAGACTCCATGAACTTCCAGTGAG...TAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGCTTTGGACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
3UTR CAA 72 bp CAATTACAGTGTTGCTGTATGAACTTGGCACTACTATaGAATGAACCCATTAATGCTGGGAAATCAAATTCT +
Preference number: 4 (lower is better)
Translates to: QLQCCCMNLALL*NEPINAGKSNS
Trigger: AGAATTTGATTTCCCAGCATTAATGGGTTCATTCAATAGTAGTGCCAAGTTCATACAGCAACACTGTAATTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR GCA 90 bp CCTACATATCATTATCACCCAAAGTCCACAGTTTATATTATTCCTTCTGGAGAAAATAACATACTCAGCTaGTTGTTTGTAGTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: PTYHYHPKSTVYIIPSGENNILS*LFVVLQ
Trigger: TTGAAGCACTACAAACAAGCAGCTGAGTATGTTATT...TTCTCCAGAAGGAATAATATAAACTGTGGACTTTGGGTGATAATGATATGTAGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS GCA 90 bp GCCCTCAGCCGCCACCGCGTCCGCCGTGTCCCTCGCGTCCCCGGCTaGCGTCAAACCCATGCCCAACGCCTCTTCCAGGACCCTCACGGC +
Preference number: 5 (lower is better)
Translates to: ALSRHRVRRVPRVPG*RQTHAQRLFQDPHG
Trigger: GCCGTGAGGGTCCTGGAAGAGGCGTTGGGCATGGGTTTGACGGCAGCCGGGGACGCGAGGGACACGGCGGACGCGGTGGCGGCTGAGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000272898.11
ENST00000331683.10
ENST00000406979.6
ENST00000413312.5
ENST00000420497.6
ENST00000432529.6
ENST00000440779.5
ENST00000447990.1
ENST00000452556.5
CDS TCA 90 bp AACGCCTCTTCCAGGACCCTCACGGCGGAGCTGGGCATCCCTCGCTaGGCAGCCATCTCTGGCGCTTCGGGCCCCCACCCCCAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: NASSRTLTAELGIPR*AAISGASGPHPQQA
Trigger: GGCCTGCTGGGGGTGGGGGCCCGAAGCGCCAGAGATGGCTGCTCAGCGAGGGATGCCCAGCTCCGCCGTGAGGGTCCTGGAAGAGGCGTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000272898.11
ENST00000406979.6
ENST00000413312.5
ENST00000420497.6
ENST00000432529.6
ENST00000440779.5
CDS CCA 90 bp AGAGGCTCCTCCGGAGTGGCCCCAAGGCTCAAAAGGCGCCGCCAGTaGGAGGCCCTCGCCTTCGTCCCAACACCCATTACCCGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: RGSSGVAPRLKRRRQ*EALAFVPTPITRQR
Trigger: GCGCTGGCGGGTAATGGGTGTTGGGACGAAGGCGAGGGCCTCCCACTGGCGGCGCCTTTTGAGCCTTGGGGCCACTCCGGAGGAGCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS CCA 90 bp TCAAACCCATGCCCAACGCCTCTTCCAGGACCCTCACGGCGGAGCTaGGCATCCCTCGCTGAGCAGCCATCTCTGGCGCTTCGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: SNPCPTPLPGPSRRS*ASLAEQPSLALRAP
Trigger: GGGGGCCCGAAGCGCCAGAGATGGCTGCTCAGCGAGGGATGCCCAGCTCCGCCGTGAGGGTCCTGGAAGAGGCGTTGGGCATGGGTTTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272898.11
ENST00000331683.10
ENST00000406979.6
ENST00000413312.5
ENST00000420497.6
ENST00000432529.6
ENST00000440779.5
ENST00000452556.5
CDS CCA 90 bp GCCAGGCATGCCAGCTGCTGCAGTGGGGCAGGCAGCTCCAGGCACTaGCACAGGCACTGGATCTGTGTAAGCCTGGAGCTGGATCAGATG +
Preference number: 5 (lower is better)
Translates to: ARHASCCSGAGSSRH*HRHWICVSLELDQM
Trigger: CATCTGATCCAGCTCCAGGCTTACACAGATCCAGTGCCTGTGCCAGTGCCTGGAGCTGCCTGCCCCACTGCAGCAGCTGGCATGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS CCA 90 bp AGCTGCTGCAGTGGGGCAGGCAGCTCCAGGCACTGGCACAGGCACTaGATCTGTGTAAGCCTGGAGCTGGATCAGATGCACTCCAAGCAA +
Preference number: 5 (lower is better)
Translates to: SCCSGAGSSRHWHRH*ICVSLELDQMHSKQ
Trigger: TTGCTTGGAGTGCATCTGATCCAGCTCCAGGCTTACACAGATCCAGTGCCTGTGCCAGTGCCTGGAGCTGCCTGCCCCACTGCAGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS CCA 90 bp TCAGCTGCAGGATACAGCCTCCTGATGTCCCGGGAAACACTCAGGTaGCAGGAGGCTGCACATGACCCCACCCACTTTTGCCATGGACAG +
Preference number: 5 (lower is better)
Translates to: SAAGYSLLMSRETLR*QEAAHDPTHFCHGQ
Trigger: CTGTCCATGGCAAAAGTGGGTGGGGTCATGTGCAGCCTCCTGCCACCTGAGTGTTTCCCGGGACATCAGGAGGCTGTATCCTGCAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480494.1
CDS-3UTR CAA 90 bp GAAGCCACAAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGGAAGCACATTGCATTTaGGAAGGCCCAACACCTTCC +
Preference number: 5 (lower is better)
Translates to: EATKLPQECHVQDHTARLEAHCI*EGPTPS
Trigger: GGAAGGTGTTGGGCCTTCCAAAATGCAATGTGCTTC...CAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTTGTGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp GTGAGGAGGAAGCCACAAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGGAGGAAGCCACAAAATaGCCGCAGGAGTGCCATGTG +
Preference number: 5 (lower is better)
Translates to: VRRKPQNCRRSAMCRTTLEEATK*PQECHV
Trigger: CACATGGCACTCCTGCGGCAATTTTGTGGCTTCCTC...CAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTTGTGGCTTCCTCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp ACAGCCCAGATTCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGTGAGGGGGTGGCGTCTGGATGCTaGGAAACATCTGAAACTGCA +
Preference number: 5 (lower is better)
Translates to: TAQIPHQPKASQEQRGEGVASGC*ETSETA
Trigger: TGCAGTTTCAGATGTTTCCAAGCATCCAGACGCCAC...CCCCTCACCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGAATCTGGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CAA 90 bp TGCTGCAGTGGGGCAGGCAGCTCCAGGCACTGGCACAGGCACTGGATCTGTGTACAGGTACTGCATGCTTaGAAGGAAGAACTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: CCSGAGSSRHWHRHWICVQVLHA*KEELFS
Trigger: GGAAAACAGTTCTTCCTTCAAAGCATGCAGTACCTG...TACACAGATCCAGTGCCTGTGCCAGTGCCTGGAGCTGCCTGCCCCACTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CAA 90 bp AGTGAGAACCAGGTCCAGCCACTGTGCACAGCCAGGCATGCCAGCTGCTGCAGTATCTGCCCAACTACTTaGTCTCTTTCCAAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: SENQVQPLCTARHASCCSICPTT*SLSKEV
Trigger: GACCTCCTTGGAAAGAGACAAAGTAGTTGGGCAGAT...ACTGCAGCAGCTGGCATGCCTGGCTGTGCACAGTGGCTGGACCTGGTTCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CAA 90 bp GTGAGGAGGAAGCCACAAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCCCGTGAGAAGCACATaGCATTTTGGAAGGCCCAAC +
Preference number: 5 (lower is better)
Translates to: VRRKPQNCRRSAMCRTTLPVRST*HFGRPN
Trigger: GTTGGGCCTTCCAAAATGCAATGTGCTTCTCACGGG...CAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTTGTGGCTTCCTCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp AGTGAGAACCAGGTCCAGCCACTGTGCACAGCCAGGCATGCCAGCTGCTGCAGTCTTGGGCCATCTGAATaGCTTTTGCCAGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: SENQVQPLCTARHASCCSLGPSE*LLPDLL
Trigger: AAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAG...ACTGCAGCAGCTGGCATGCCTGGCTGTGCACAGTGGCTGGACCTGGTTCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CAA 90 bp AGTGAGAACCAGGTCCAGCCACTGTGCACAGCCAGGCATGCCAGCTGCTGCAGTATCTGTAGCCTGTTCTaGGGCCATCTGAATTGCTTT +
Preference number: 5 (lower is better)
Translates to: SENQVQPLCTARHASCCSICSLF*GHLNCF
Trigger: AAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT...ACTGCAGCAGCTGGCATGCCTGGCTGTGCACAGTGGCTGGACCTGGTTCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CAA 90 bp GGCAGGCAGCTCCAGGCACTGGCACAGGCACTGGATCTGTGTAAGCCTGGAGCTAGCTTTGTCAGCTGCTaGTTTGTAGTGCTTCAAATC +
Preference number: 5 (lower is better)
Translates to: GRQLQALAQALDLCKPGASFVSC*FVVLQI
Trigger: GATTTGAAGCACTACAAACAAGCAGCTGACAAAGCT...AGCTCCAGGCTTACACAGATCCAGTGCCTGTGCCAGTGCCTGGAGCTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CAA 90 bp GTGAGGAGGAAGCCACAAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGGAGACTAGGATGTCTTaGTGGGGTTGCATGGAGACA +
Preference number: 5 (lower is better)
Translates to: VRRKPQNCRRSAMCRTTLETRMS*WGCMET
Trigger: TGTCTCCATGCAACCCCACAAAGACATCCTAGTCTC...CAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTTGTGGCTTCCTCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp TTTGGAAGGCCCAACACCTTCCAGAGTCGGTCCTCGCCACAGGAGACTAGGATGCTTGAAGTAGCCAATTaGTCGCCACTGGGATGGAAG +
Preference number: 5 (lower is better)
Translates to: FGRPNTFQSRSSPQETRMLEVAN*SPLGWK
Trigger: CTTCCATCCCAGTGGCGACAAATTGGCTACTTCAAG...CATCCTAGTCTCCTGTGGCGAGGACCGACTCTGGAAGGTGTTGGGCCTTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp AGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTGCTGACGAGGAAGCCACAAAATaGCCGCAGGAGTGCCATGTG +
Preference number: 5 (lower is better)
Translates to: RRHFQALKGMPSAAGCADEEATK*PQECHV
Trigger: CACATGGCACTCCTGCGGCAATTTTGTGGCTTCCTC...GTCAGCACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp TTTGGAAGGCCCAACACCTTCCAGAGTCGGTCCTCGCCACAGGAGACTAGGATGCCTCATTGCCAGGACTaGGACCTATATCGATGGACA +
Preference number: 5 (lower is better)
Translates to: FGRPNTFQSRSSPQETRMPHCQD*DLYRWT
Trigger: TGTCCATCGATATAGGTCCAAGTCCTGGCAATGAGG...CATCCTAGTCTCCTGTGGCGAGGACCGACTCTGGAAGGTGTTGGGCCTTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp GAAGCCACAAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTCATATGTATTCAGATaGTGCAGTCCTACCATTGGC +
Preference number: 5 (lower is better)
Translates to: EATKLPQECHVQDHTARLSYVFR*CSPTIG
Trigger: GCCAATGGTAGGACTGCACAATCTGAATACATATGA...CAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTTGTGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CAA 90 bp TCCAGAGTCGGTCCTCGCCACAGGAGACTAGGATGTCTTTGTGGGGTTGCATGGCTTTGGGAGGATTGCTaGAGGACAGGAATTTGTGAC +
Preference number: 5 (lower is better)
Translates to: SRVGPRHRRLGCLCGVAWLWEDC*RTGICD
Trigger: GTCACAAATTCCTGTCCTCAAGCAATCCTCCCAAAG...CCATGCAACCCCACAAAGACATCCTAGTCTCCTGTGGCGAGGACCGACTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CAA 90 bp AAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCATTGACTACTTGGCCTaGATGGTGGAGGATGTAATG +
Preference number: 5 (lower is better)
Translates to: KIAAGVPCAGPHCAAVSFIDYLA*MVEDVM
Trigger: CATTACATCCTCCACCATCAAGGCCAAGTAGTCAAT...GAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CAA 90 bp TGCTGCAGTGGGGCAGGCAGCTCCAGGCACTGGCACAGGCACTGGATCTGTGTATCCTTCTCATCACCTTaGTATTGCCTTTCATCTTTG +
Preference number: 5 (lower is better)
Translates to: CCSGAGSSRHWHRHWICVSFSSP*YCLSSL
Trigger: CAAAGATGAAAGGCAATACAAAGGTGATGAGAAGGA...TACACAGATCCAGTGCCTGTGCCAGTGCCTGGAGCTGCCTGCCCCACTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS GCA 90 bp TGCTGTGGGCACCCAAATCTGGATGAGAATTCAGTGGCGTCTGGATaGTTGGAAACATCTGAAACTGCACAGCCCCAAAGAGGGTGTCAC +
Preference number: 5 (lower is better)
Translates to: CCGHPNLDENSVASG*LETSETAQPQRGCH
Trigger: GTGACACCCTCTTTGGGGCTGTGCAGTTTCAGATGTTTCCAAGCATCCAGACGCCACTGAATTCTCATCCAGATTTGGGTGCCCACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS CCA 90 bp GTGGGCACCCAAATCTGGATGAGAATTCAGTGGCGTCTGGATGCTTaGAAACATCTGAAACTGCACAGCCCCAAAGAGGGTGTCACAGCA +
Preference number: 5 (lower is better)
Translates to: VGTQIWMRIQWRLDA*KHLKLHSPKEGVTA
Trigger: TGCTGTGACACCCTCTTTGGGGCTGTGCAGTTTCAGATGTTTCCAAGCATCCAGACGCCACTGAATTCTCATCCAGATTTGGGTGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CAA 90 bp AATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCAAAGCTTTGTCAGCTGCTaGTTTGTAGTGCTTCAAATC +
Preference number: 5 (lower is better)
Translates to: NCRRSAMCRTTLRGCVLQSFVSC*FVVLQI
Trigger: GATTTGAAGCACTACAAACAAGCAGCTGACAAAGCT...TTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR CAA 90 bp GACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTCCCGTGAGAAGCACATaGCATTTTGGAAGGCCCAAC +
Preference number: 5 (lower is better)
Translates to: DYRRHFQALKGMPSAAGCPVRST*HFGRPN
Trigger: GTTGGGCCTTCCAAAATGCAATGTGCTTCTCACGGG...ACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp ATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCAAATATCGATGGACACAATaGGTAACAGCTTCCGAAAGT +
Preference number: 5 (lower is better)
Translates to: IAAGVPCAGPHCAAVSFKYRWTQ*VTASES
Trigger: ACTTTCGGAAGCTGTTACCAATTGTGTCCATCGATA...TTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp AAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTGTCCTTCTCAAAATTCACCTCATaGCCAGGACTTGGACCTATA +
Preference number: 5 (lower is better)
Translates to: KIAAGVPCAGPHCAAVSFSKFTS*PGLGPI
Trigger: TATAGGTCCAAGTCCTGGCAATGAGGTGAATTTTGA...GAAGGACACAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp GAAGCCACAAAATTGCCGCAGGAGTGCCATGTGCAGGACCACACTGCGCGGCTGTCTTTACGGAGATGGTaGTTTATCCATCCACCATAT +
Preference number: 5 (lower is better)
Translates to: EATKLPQECHVQDHTARLSLRRW*FIHPPY
Trigger: ATATGGTGGATGGATAAACAACCATCTCCGTAAAGA...CAGCCGCGCAGTGTGGTCCTGCACATGGCACTCCTGCGGCAATTTTGTGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS CCA 90 bp CATCTTTCACTGGGATGGAAGCAGCAGTCTGAAAGCCAGTCAGTGTaGCCAAATCCCGTGAGAAGCACATTGCATTTTGGAAGGCCCAAC +
Preference number: 5 (lower is better)
Translates to: HLSLGWKQQSESQSV*PNPVRSTLHFGRPN
Trigger: GTTGGGCCTTCCAAAATGCAATGTGCTTCTCACGGGATTTGGCCACACTGACTGGCTTTCAGACTGCTGCTTCCATCCCAGTGAAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451561.1
CDS-3UTR CAA 90 bp TTTGGAAGGCCCAACACCTTCCAGAGTCGGTCCTCGCCACAGGAGACTAGGATGCCATCTGAATTGCTTTaGCCAGATCTTCTTCACCTT +
Preference number: 5 (lower is better)
Translates to: FGRPNTFQSRSSPQETRMPSELL*PDLLHL
Trigger: AAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATGG...CATCCTAGTCTCCTGTGGCGAGGACCGACTCTGGAAGGTGTTGGGCCTTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp GACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTGAAGCACATTGCATTTaGGAAGGCCCAACACCTTCC +
Preference number: 5 (lower is better)
Translates to: DYRRHFQALKGMPSAAGCEAHCI*EGPTPS
Trigger: GGAAGGTGTTGGGCCTTCCAAAATGCAATGTGCTTC...ACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp GTTTGGGACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGCTTGAAGTAGCCAATTaGTCGCCACTGGGATGGAAG +
Preference number: 5 (lower is better)
Translates to: VWDYRRHFQALKGMPSAALEVAN*SPLGWK
Trigger: CTTCCATCCCAGTGGCGACAAATTGGCTACTTCAAG...CGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTCCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp AGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTGCTGACCATATAGACAGGGTCTaGTCTGCAGAGCTTGTGAGA +
Preference number: 5 (lower is better)
Translates to: RRHFQALKGMPSAAGCADHIDRV*SAELVR
Trigger: TCTCACAAGCTCTGCAGACAAGACCCTGTCTATATG...GTCAGCACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS CCA 90 bp CAAGCAACTTCTGCTGTGGGCACCCAAATCTGGATGAGAATTCAGTaGCGTCTGGATGCTTGGAAACATCTGAAACTGCACAGCCCCAAA +
Preference number: 5 (lower is better)
Translates to: QATSAVGTQIWMRIQ*RLDAWKHLKLHSPK
Trigger: TTTGGGGCTGTGCAGTTTCAGATGTTTCCAAGCATCCAGACGCCACTGAATTCTCATCCAGATTTGGGTGCCCACAGCAGAAGTTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CAA 90 bp CTTGCTACAGCCCAGATTCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGTTTTCTTCAATGTTTCTaGAAGTCCAGAAATCTGCCC +
Preference number: 5 (lower is better)
Translates to: LATAQIPHQPKASQEQRGFLQCF*KSRNLP
Trigger: GGGCAGATTTCTGGACTTCAAGAAACATTGAAGAAA...ACCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGAATCTGGGCTGTAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CAA 90 bp CTTGCTACAGCCCAGATTCCACACCAGCCAAAGGCAAGCCAGGAGCAGAGAGGTTGTTTTACATTTGTTTaGTTCCCTGGCTTCACGAAG +
Preference number: 5 (lower is better)
Translates to: LATAQIPHQPKASQEQRGCFTFV*FPGFTK
Trigger: CTTCGTGAAGCCAGGGAACAAAACAAATGTAAAACA...ACCTCTCTGCTCCTGGCTTGCCTTTGGCTGGTGTGGAATCTGGGCTGTAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS-3UTR CAA 90 bp TCCAGAGTCGGTCCTCGCCACAGGAGACTAGGATGTCTTTGTGGGGTTGCATGGCAGGTTTGGATTTGGTaGCATATCTATGGGAAATTC +
Preference number: 5 (lower is better)
Translates to: SRVGPRHRRLGCLCGVAWQVWIW*HIYGKF
Trigger: GAATTTCCCATAGATATGCAACCAAATCCAAACCTG...CCATGCAACCCCACAAAGACATCCTAGTCTCCTGTGGCGAGGACCGACTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp GTTTGGGACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGCAGTTCTTTGCTGGTTaGGGACTACAGGAGGCATTT +
Preference number: 5 (lower is better)
Translates to: VWDYRRHFQALKGMPSAAQFFAG*GLQEAF
Trigger: AAATGCCTCCTGTAGTCCCAAACCAGCAAAGAACTG...CGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTCCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp TTTGGAAGGCCCAACACCTTCCAGAGTCGGTCCTCGCCACAGGAGACTAGGATGTCTGGGATGCTAAAATaGTCATCTGGTATCATGTCA +
Preference number: 5 (lower is better)
Translates to: FGRPNTFQSRSSPQETRMSGMLK*SSGIMS
Trigger: TGACATGATACCAGATGACAATTTTAGCATCCCAGA...CATCCTAGTCTCCTGTGGCGAGGACCGACTCTGGAAGGTGTTGGGCCTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR CAA 90 bp GTTTGGGACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGCAGGTACTGCATGCTTaGAAGGAAGAACTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: VWDYRRHFQALKGMPSAAQVLHA*KEELFS
Trigger: GGAAAACAGTTCTTCCTTCAAAGCATGCAGTACCTG...CGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTCCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp GTGCAGGACCACACTGCGCGGCTGTGTCCTTCAAAGGTCAAAATGCAATCGCCTAGCCAAGTGTGGCAATaGAATGCCAGTTTTCAAATA +
Preference number: 5 (lower is better)
Translates to: VQDHTARLCPSKVKMQSPSQVWQ*NASFQI
Trigger: TATTTGAAAACTGGCATTCAATTGCCACACTTGGCT...AGGCGATTGCATTTTGACCTTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CAA 90 bp CATATACCTGTTCTTGCATCCCATATAGACAGGGTCTTGTCTGCAGAGCTTGTGAGCGTCCCCAGGACTTaGGGAAGACACCAGTTGATT +
Preference number: 5 (lower is better)
Translates to: HIPVLASHIDRVLSAELVSVPRT*GRHQLI
Trigger: AATCAACTGGTGTCTTCCCAAAGTCCTGGGGACGCT...CACAAGCTCTGCAGACAAGACCCTGTCTATATGGGATGCAAGAACAGGTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CAA 90 bp TCCCATACACCTCCTACTCCCACACATGCACAGCCTTCCCCATTATCAATAGCCCCATCTGAATTGCTTTaGCCAGATCTTCTTCACCTT +
Preference number: 5 (lower is better)
Translates to: SHTPPTPTHAQPSPLSIAPSELL*PDLLHL
Trigger: AAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATGG...GGCTATTGATAATGGGGAAGGCTGTGCATGTGTGGGAGTAGGAGGTGTATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR CAA 90 bp GTGCAGGACCACACTGCGCGGCTGTGTCCTTCAAAGGTCAAAATGCAATCGCCTGCTTGTAGTCAAATTTaGCTGGAGAAAGACTTTCTT +
Preference number: 5 (lower is better)
Translates to: VQDHTARLCPSKVKMQSPACSQI*LEKDFL
Trigger: AAGAAAGTCTTTCTCCAGCAAAATTTGACTACAAGC...AGGCGATTGCATTTTGACCTTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp TTGTGGGGTTGCATGGAGACACAGCTCACTGGAAGTTCATGGAGTCTAAAAATGGAGACTAGGATGTCTTaGTGGGGTTGCATGGAGACA +
Preference number: 5 (lower is better)
Translates to: LWGCMETQLTGSSWSLKMETRMS*WGCMET
Trigger: TGTCTCCATGCAACCCCACAAAGACATCCTAGTCTC...CATTTTTAGACTCCATGAACTTCCAGTGAGCTGTGTCTCCATGCAACCCCACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp TGGGGTTGCATGGAGACACAGCTCACTGGAAGTTCATGGAGTCTAAAAATGTTTCCCGTGAGAAGCACATaGCATTTTGGAAGGCCCAAC +
Preference number: 5 (lower is better)
Translates to: WGCMETQLTGSSWSLKMFPVRST*HFGRPN
Trigger: GTTGGGCCTTCCAAAATGCAATGTGCTTCTCACGGG...AAACATTTTTAGACTCCATGAACTTCCAGTGAGCTGTGTCTCCATGCAACCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp GTTTGGGACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGTATCGATGGACACAATaGGTAACAGCTTCCGAAAGT +
Preference number: 5 (lower is better)
Translates to: VWDYRRHFQALKGMPSAAYRWTQ*VTASES
Trigger: ACTTTCGGAAGCTGTTACCAATTGTGTCCATCGATA...CGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTCCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp ATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCACCCCTCATTGCCAGGACTaGGACCTATATCGATGGACA +
Preference number: 5 (lower is better)
Translates to: ICSLFLGHLNCFCQIFFTPHCQD*DLYRWT
Trigger: TGTCCATCGATATAGGTCCAAGTCCTGGCAATGAGG...GGTGAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp AGCTCTCTTCTCTGGTGTCTTTCCCTACAGATTCCAGTGGCTTCAAAAGCTGTGTTGTCATCTGGTATCTaGAAGTCCAACAGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: SSLLWCLSLQIPVASKAVLSSGI*KSNRGS
Trigger: GGAGCCTCTGTTGGACTTCAAGATACCAGATGACAA...CACAGCTTTTGAAGCCACTGGAATCTGTAGGGAAAGACACCAGAGAAGAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp AGCTCTCTTCTCTGGTGTCTTTCCCTACAGATTCCAGTGGCTTCAAAAGCTGTGTCCACAAAGCTCAGTTaGGAACTTTCCACAGACCCA +
Preference number: 5 (lower is better)
Translates to: SSLLWCLSLQIPVASKAVSTKLS*ELSTDP
Trigger: TGGGTCTGTGGAAAGTTCCAAACTGAGCTTTGTGGA...CACAGCTTTTGAAGCCACTGGAATCTGTAGGGAAAGACACCAGAGAAGAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp GGACTTGGACCTATATCGATGGACACAATTGGTAACAGCTTCCGAAAGTCCCACATCTGTAGCCTGTTCTaGGGCCATCTGAATTGCTTT +
Preference number: 5 (lower is better)
Translates to: GLGPISMDTIGNSFRKSHICSLF*GHLNCF
Trigger: AAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT...GTGGGACTTTCGGAAGCTGTTACCAATTGTGTCCATCGATATAGGTCCAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp AAGCAGCAGTCTGAAAGCCAGTCAGTGTGGCCAAATCCCGTGAGAAGCACATTGTTTCTTCAATGTTTCTaGAAGTCCAGAAATCTGCCC +
Preference number: 5 (lower is better)
Translates to: KQQSESQSVWPNPVRSTLFLQCF*KSRNLP
Trigger: GGGCAGATTTCTGGACTTCAAGAAACATTGAAGAAA...CAATGTGCTTCTCACGGGATTTGGCCACACTGACTGGCTTTCAGACTGCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp GACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTTGTTTTACATTTGTTTaGTTCCCTGGCTTCACGAAG +
Preference number: 5 (lower is better)
Translates to: DYRRHFQALKGMPSAAGCCFTFV*FPGFTK
Trigger: CTTCGTGAAGCCAGGGAACAAAACAAATGTAAAACA...ACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp GTTTGGGACTACAGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGCAGGTTTGGATTTGGTaGCATATCTATGGGAAATTC +
Preference number: 5 (lower is better)
Translates to: VWDYRRHFQALKGMPSAAQVWIW*HIYGKF
Trigger: GAATTTCCCATAGATATGCAACCAAATCCAAACCTG...CGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCTGTAGTCCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp AGGAGGCATTTTCAAGCCTTAAAGGGAATGCCCTCTGCAGCGGGATGTGCTGACAAATTCAGGATTAGTTaGTGGGCAACTGCTTTTATC +
Preference number: 5 (lower is better)
Translates to: RRHFQALKGMPSAAGCADKFRIS*WATAFI
Trigger: GATAAAAGCAGTTGCCCACAAACTAATCCTGAATTT...GTCAGCACATCCCGCTGCAGAGGGCATTCCCTTTAAGGCTTGAAAATGCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR CAA 90 bp CAATTATCAGGATTGTCATGCTCTTATTGGCTTCCATCTCCACAAAGCTCAGTTCTGAGCCACTCCTCATaGCAGCTCTCTTCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: QLSGLSCSYWLPSPQSSVLSHSS*QLSSLV
Trigger: CACCAGAGAAGAGAGCTGCAATGAGGAGTGGCTCAG...AACTGAGCTTTGTGGAGATGGAAGCCAATAAGAGCATGACAATCCTGATAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp AGAAGGTACAGAGATGTCCCATACACCTCCTACTCCCACACATGCACAGCCTTCAACAGAGGGATACATTaGTTAACAACTGACGAACCT +
Preference number: 5 (lower is better)
Translates to: RRYRDVPYTSYSHTCTAFNRGIH*LTTDEP
Trigger: AGGTTCGTCAGTTGTTAACAAATGTATCCCTCTGTT...GAAGGCTGTGCATGTGTGGGAGTAGGAGGTGTATGGGACATCTCTGTACCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR CAA 90 bp CAGCTTTGTAACCCCACAGGCATCACAGGATGCTATCATGTGACCCCTGGGATCTGTTGCTGTATGAACTaGGCACTACTATTGAATGAA +
Preference number: 5 (lower is better)
Translates to: QLCNPTGITGCYHVTPGICCCMN*ALLLNE
Trigger: TTCATTCAATAGTAGTGCCAAGTTCATACAGCAACA...GATCCCAGGGGTCACATGATAGCATCCTGTGATGCCTGTGGGGTTACAAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CAA 90 bp ATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCACCAGTAATCCTAGCACTTaGGGAGGATTGCTTGAGGAC +
Preference number: 5 (lower is better)
Translates to: ICSLFLGHLNCFCQIFFTSNPST*GGLLED
Trigger: GTCCTCAAGCAATCCTCCCAAAGTGCTAGGATTACT...GGTGAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CAA 90 bp ATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCACCCTTGGGCCATCTGAATaGCTTTTGCCAGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: ICSLFLGHLNCFCQIFFTLGPSE*LLPDLL
Trigger: AAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAG...GGTGAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000420497.6
ENST00000452556.5
CDS-3UTR CAA 90 bp AAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGGACTACAGGATCTGCCCAACTACTTaGTCTCTTTCCAAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: KCYLLAHLTSSLLVWDYRICPTT*SLSKEV
Trigger: GACCTCCTTGGAAAGAGACAAAGTAGTTGGGCAGAT...CCTGTAGTCCCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp TGGGGTTGCATGGAGACACAGCTCACTGGAAGTTCATGGAGTCTAAAAATGTTTATCTGCCCAACTACTTaGTCTCTTTCCAAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: WGCMETQLTGSSWSLKMFICPTT*SLSKEV
Trigger: GACCTCCTTGGAAAGAGACAAAGTAGTTGGGCAGAT...AAACATTTTTAGACTCCATGAACTTCCAGTGAGCTGTGTCTCCATGCAACCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp AAGCAGCAGTCTGAAAGCCAGTCAGTGTGGCCAAATCCCGTGAGAAGCACATTGGCTTGTAGTCAAATTTaGCTGGAGAAAGACTTTCTT +
Preference number: 5 (lower is better)
Translates to: KQQSESQSVWPNPVRSTLACSQI*LEKDFL
Trigger: AAGAAAGTCTTTCTCCAGCAAAATTTGACTACAAGC...CAATGTGCTTCTCACGGGATTTGGCCACACTGACTGGCTTTCAGACTGCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp CCTGAGCTAAAACTCGACCTGATGAATCAAAATTCACCTCATTGCCAGGACTTGATCTGTAGCCTGTTCTaGGGCCATCTGAATTGCTTT +
Preference number: 5 (lower is better)
Translates to: PELKLDLMNQNSPHCQDLICSLF*GHLNCF
Trigger: AAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT...CAAGTCCTGGCAATGAGGTGAATTTTGATTCATCAGGTCGAGTTTTAGCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR CAA 90 bp TTTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAAGAGGAAGCCACAAAATaGCCGCAGGAGTGCCATGTG +
Preference number: 5 (lower is better)
Translates to: FPGLFAYDAFDENHVLSEEEATK*PQECHV
Trigger: CACATGGCACTCCTGCGGCAATTTTGTGGCTTCCTC...TTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp GAGGTCAGCATTTTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTCATATAGACAGGGTCTaGTCTGCAGAGCTTGTGAGA +
Preference number: 5 (lower is better)
Translates to: EVSIFSFSKVWCFSCNTLHIDRV*SAELVR
Trigger: TCTCACAAGCTCTGCAGACAAGACCCTGTCTATATG...AAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAAAATGCTGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp AGCTCTCTTCTCTGGTGTCTTTCCCTACAGATTCCAGTGGCTTCAAAAGCTGTGATCTCTGGCCTCCTCTaGATCCTATATAATTGTATC +
Preference number: 5 (lower is better)
Translates to: SSLLWCLSLQIPVASKAVISGLL*ILYNCI
Trigger: GATACAATTATATAGGATCAAGAGGAGGCCAGAGAT...CACAGCTTTTGAAGCCACTGGAATCTGTAGGGAAAGACACCAGAGAAGAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp CATGGCCAGATTTGCAATGTTTCGCATCACTACTTAACTTCTACAATCTCTGGCCAGGCATGGCCAGATTaGCAATGTTTCGCATCACTA +
Preference number: 5 (lower is better)
Translates to: HGQICNVSHHYLTSTISGQAWPD*QCFASL
Trigger: TAGTGATGCGAAACATTGCAAATCTGGCCATGCCTG...GCCAGAGATTGTAGAAGTTAAGTAGTGATGCGAAACATTGCAAATCTGGCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp GTCAGCATTTTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTATAGACAGTGCTCCATCCTaGTCAAAAGGACTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: VSIFSFSKVWCFSCNTLIDSAPS*SKGLQG
Trigger: TCCCTGCAGTCCTTTTGACAAGGATGGAGCACTGTC...TATAAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAAAATGCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CAA 90 bp ATCTGTAGCCTGTTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCACCCTTCTGAAGACAGTTTaGTGCTGCTTTGAGAATGCT +
Preference number: 5 (lower is better)
Translates to: ICSLFLGHLNCFCQIFFTLLKTV*CCFENA
Trigger: AGCATTCTCAAAGCAGCACAAAACTGTCTTCAGAAG...GGTGAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS CCA 90 bp TTCTTGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCACCTTCTaGGATGCTAAAATTGTCATCTGGTATCTTGAAGTCCAACAGAGG +
Preference number: 5 (lower is better)
Translates to: FLGHLNCFCQIFFTF*DAKIVIWYLEVQQR
Trigger: CCTCTGTTGGACTTCAAGATACCAGATGACAATTTTAGCATCCCAGAAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp CATGGCCAGATTTGCAATGTTTCGCATCACTACTTAACTTCTACAATCTCTGGCCTTGGGCCATCTGAATaGCTTTTGCCAGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: HGQICNVSHHYLTSTISGLGPSE*LLPDLL
Trigger: AAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAG...GCCAGAGATTGTAGAAGTTAAGTAGTGATGCGAAACATTGCAAATCTGGCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp GAGGTCAGCATTTTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTCTTGGGCCATCTGAATaGCTTTTGCCAGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: EVSIFSFSKVWCFSCNTLLGPSE*LLPDLL
Trigger: AAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAG...AAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAAAATGCTGACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000440779.5
ENST00000452556.5
CDS-3UTR CAA 90 bp GAATGCTGTGTAAGCTTTGTTCCTGGTTTTATAAGGCGGATATGGGATGCTGAACAGGTACTGCATGCTTaGAAGGAAGAACTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: ECCVSFVPGFIRRIWDAEQVLHA*KEELFS
Trigger: GGAAAACAGTTCTTCCTTCAAAGCATGCAGTACCTG...TTCAGCATCCCATATCCGCCTTATAAAACCAGGAACAAAGCTTACACAGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp AATGCATGTGACCATAAAGTGACTGCTCACATATACCTGTTCTTGCATCCCATACATATAGACAGGGTCTaGTCTGCAGAGCTTGTGAGA +
Preference number: 5 (lower is better)
Translates to: NACDHKVTAHIYLFLHPIHIDRV*SAELVR
Trigger: TCTCACAAGCTCTGCAGACAAGACCCTGTCTATATG...TATGGGATGCAAGAACAGGTATATGTGAGCAGTCACTTTATGGTCACATGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp TGGGGTTGCATGGAGACACAGCTCACTGGAAGTTCATGGAGTCTAAAAATGTTTTATCGATGGACACAATaGGTAACAGCTTCCGAAAGT +
Preference number: 5 (lower is better)
Translates to: WGCMETQLTGSSWSLKMFYRWTQ*VTASES
Trigger: ACTTTCGGAAGCTGTTACCAATTGTGTCCATCGATA...AAACATTTTTAGACTCCATGAACTTCCAGTGAGCTGTGTCTCCATGCAACCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp TCCAAAGCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCCCTCATTGCCAGGACTaGGACCTATATCGATGGACA +
Preference number: 5 (lower is better)
Translates to: SKACFKADCKCYLLAHLTPHCQD*DLYRWT
Trigger: TGTCCATCGATATAGGTCCAAGTCCTGGCAATGAGG...GGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGCTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp TTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTATAGTCGGTTCATTGGGAAGACACCAGTaGATTTCTGTGGTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: FSFSKVWCFSCNTLIVGSLGRHQ*ISVVLS
Trigger: GGAAAGGACCACAGAAATCAACTGGTGTCTTCCCAA...TGAACCGACTATAAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CAA 90 bp CATGGCCAGATTTGCAATGTTTCGCATCACTACTTAACTTCTACAATCTCTGGCCCATCTGAATTGCTTTaGCCAGATCTTCTTCACCTT +
Preference number: 5 (lower is better)
Translates to: HGQICNVSHHYLTSTISGPSELL*PDLLHL
Trigger: AAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATGG...GCCAGAGATTGTAGAAGTTAAGTAGTGATGCGAAACATTGCAAATCTGGCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp TTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTATAGTCGGTTCACTTGGGCCATCTGAATaGCTTTTGCCAGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: FSFSKVWCFSCNTLIVGSLGPSE*LLPDLL
Trigger: AAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAG...TGAACCGACTATAAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000440779.5
ENST00000452556.5
CDS-3UTR CAA 90 bp ATTGGTGAACATCTCCCATGTACCAGGTACCATGAAAGGTGCAAAATTTCAGTAATCTGTAGCCTGTTCTaGGGCCATCTGAATTGCTTT +
Preference number: 5 (lower is better)
Translates to: IGEHLPCTRYHERCKISVICSLF*GHLNCF
Trigger: AAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT...TACTGAAATTTTGCACCTTTCATGGTACCTGGTACATGGGAGATGTTCACCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420497.6
CDS-3UTR CAA 90 bp TATCAGGATTGTCATGCTCTTATTGGCTTCCATCTCCACAAAGCTCAGTTTGGAAGCTTTGTCAGCTGCTaGTTTGTAGTGCTTCAAATC +
Preference number: 5 (lower is better)
Translates to: YQDCHALIGFHLHKAQFGSFVSC*FVVLQI
Trigger: GATTTGAAGCACTACAAACAAGCAGCTGACAAAGCT...TCCAAACTGAGCTTTGTGGAGATGGAAGCCAATAAGAGCATGACAATCCTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp ATGTCCAAAGCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAGAGACTAGGATGTCTTaGTGGGGTTGCATGGAGACA +
Preference number: 5 (lower is better)
Translates to: MSKACFKADCKCYLLAHLETRMS*WGCMET
Trigger: TGTCTCCATGCAACCCCACAAAGACATCCTAGTCTC...TAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGCTTTGGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp AGCATTTTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTATAGTCCAGAGTTTCACTGTGTaGCCCATGCTGGTTTTGAAC +
Preference number: 5 (lower is better)
Translates to: SIFSFSKVWCFSCNTLIVQSFTV*PMLVLN
Trigger: GTTCAAAACCAGCATGGGCAACACAGTGAAACTCTG...GACTATAAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAAAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CAA 90 bp GAACATCTCCCATGTACCAGGTACCATGAAAGGTGCAAAATTTCAGTATCTGTACCATCTGAATTGCTTTaGCCAGATCTTCTTCACCTT +
Preference number: 5 (lower is better)
Translates to: EHLPCTRYHERCKISVSVPSELL*PDLLHL
Trigger: AAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATGG...TACAGATACTGAAATTTTGCACCTTTCATGGTACCTGGTACATGGGAGATGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420497.6
CDS-3UTR CAA 90 bp GCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTATCTGTAGCCTGTTCTaGGGCCATCTGAATTGCTTT +
Preference number: 5 (lower is better)
Translates to: ACFKADCKCYLLAHLTSSICSLF*GHLNCF
Trigger: AAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT...AGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp GGTATAATGACCAGAAGCAGAAGTCCTTCCATTATAGTTGACTTGTTTTTCTCTATCTGCCCAACTACTTaGTCTCTTTCCAAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: GIMTRSRSPSIIVDLFFSICPTT*SLSKEV
Trigger: GACCTCCTTGGAAAGAGACAAAGTAGTTGGGCAGAT...AGAGAAAAACAAGTCAACTATAATGGAAGGACTTCTGCTTCTGGTCATTATACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp TTTTTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGATCTGCCCAACTACTTaGTCTCTTTCCAAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: FFLDYSLMMHSMKITFFLICPTT*SLSKEV
Trigger: GACCTCCTTGGAAAGAGACAAAGTAGTTGGGCAGAT...CAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000440779.5
ENST00000452556.5
CDS-3UTR CAA 90 bp TTGTCATGCTCTTATTGGCTTCCATCTCCACAAAGCTCAGTTTGGAACTTTCCATTTCTTCAATGTTTCTaGAAGTCCAGAAATCTGCCC +
Preference number: 5 (lower is better)
Translates to: LSCSYWLPSPQSSVWNFPFLQCF*KSRNLP
Trigger: GGGCAGATTTCTGGACTTCAAGAAACATTGAAGAAA...TGGAAAGTTCCAAACTGAGCTTTGTGGAGATGGAAGCCAATAAGAGCATGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp GACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCTGGTTTGGGACGCTTGTAGTCAAATTTaGCTGGAGAAAGACTTTCTT +
Preference number: 5 (lower is better)
Translates to: DCKCYLLAHLTSSLLVWDACSQI*LEKDFL
Trigger: AAGAAAGTCTTTCTCCAGCAAAATTTGACTACAAGC...GTCCCAAACCAGCAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp GACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATTTTCAGCTTGAAGTAGCCAATTaGTCGCCACTGGGATGGAAG +
Preference number: 5 (lower is better)
Translates to: DYSLMMHSMKITFFLNFQLEVAN*SPLGWK
Trigger: CTTCCATCCCAGTGGCGACAAATTGGCTACTTCAAG...CTGAAAATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp ATGTCCAAAGCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTACAGTTCTTTGCTGGTTaGGGACTACAGGAGGCATTT +
Preference number: 5 (lower is better)
Translates to: MSKACFKADCKCYLLAHLQFFAG*GLQEAF
Trigger: AAATGCCTCCTGTAGTCCCAAACCAGCAAAGAACTG...TAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGCTTTGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp GTGAACATCTCCCATGTACCAGGTACCATGAAAGGTGCAAAATTTCAGTATCTGTCTGGGATGCTAAAATaGTCATCTGGTATCATGTCA +
Preference number: 5 (lower is better)
Translates to: VNISHVPGTMKGAKFQYLSGMLK*SSGIMS
Trigger: TGACATGATACCAGATGACAATTTTAGCATCCCAGA...CAGATACTGAAATTTTGCACCTTTCATGGTACCTGGTACATGGGAGATGTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420497.6
CDS-3UTR CAA 90 bp CTGACATTTCCAATTATCAGGATTGTCATGCTCTTATTGGCTTCCATCTCCACAAAGGCAGTTCCATTTTaGGCTGATGACCCTAAAATC +
Preference number: 5 (lower is better)
Translates to: LTFPIIRIVMLLLASISTKAVPF*ADDPKI
Trigger: GATTTTAGGGTCATCAGCCAAAAATGGAACTGCCTT...TGTGGAGATGGAAGCCAATAAGAGCATGACAATCCTGATAATTGGAAATGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp ATGTCCAAAGCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTACTTGGGCCATCTGAATaGCTTTTGCCAGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: MSKACFKADCKCYLLAHLLGPSE*LLPDLL
Trigger: AAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAG...TAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGCTTTGGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp GGTATAATGACCAGAAGCAGAAGTCCTTCCATTATAGTTGACTTGTTTTTCTCTATCTGTAGCCTGTTCTaGGGCCATCTGAATTGCTTT +
Preference number: 5 (lower is better)
Translates to: GIMTRSRSPSIIVDLFFSICSLF*GHLNCF
Trigger: AAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT...AGAGAAAAACAAGTCAACTATAATGGAAGGACTTCTGCTTCTGGTCATTATACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp TTTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAAATCTGTAGCCTGTTCTaGGGCCATCTGAATTGCTTT +
Preference number: 5 (lower is better)
Translates to: FPGLFAYDAFDENHVLSEICSLF*GHLNCF
Trigger: AAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT...TTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000440779.5
ENST00000452556.5
CDS-3UTR CAA 90 bp GCTGGAGAAAGACTTTCTTTAGAAACATTCAGGTTTGGATTTGGTTGCATATCTCAGGTACTGCATGCTTaGAAGGAAGAACTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: AGERLSLETFRFGFGCISQVLHA*KEELFS
Trigger: GGAAAACAGTTCTTCCTTCAAAGCATGCAGTACCTG...AGATATGCAACCAAATCCAAACCTGAATGTTTCTAAAGAAAGTCTTTCTCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406979.6
CDS-3UTR CAA 90 bp CACAGAATCTGTATGTCCATACAAAGTACATCTGCATCTTTCACTATTAACATCATCTGCCCAACTACTTaGTCTCTTTCCAAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: HRICMSIQSTSASFTINIICPTT*SLSKEV
Trigger: GACCTCCTTGGAAAGAGACAAAGTAGTTGGGCAGAT...GATGTTAATAGTGAAAGATGCAGATGTACTTTGTATGGACATACAGATTCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp TTGTCATGCTCTTATTGGCTTCCATCTCCACAAAGCTCAGTTTGGAACTTTCCACTTGTTCTCATTTCTTaGCTTAAATTCCCCATCTGT +
Preference number: 5 (lower is better)
Translates to: LSCSYWLPSPQSSVWNFPLVLIS*LKFPIC
Trigger: ACAGATGGGGAATTTAAGCAAAGAAATGAGAACAAG...TGGAAAGTTCCAAACTGAGCTTTGTGGAGATGGAAGCCAATAAGAGCATGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp TTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTATAGTCGGTTCAAATGCAATTACAGTGTaGCTGTATGAACTTGGCACT +
Preference number: 5 (lower is better)
Translates to: FSFSKVWCFSCNTLIVGSNAITV*LYELGT
Trigger: AGTGCCAAGTTCATACAGCAACACTGTAATTGCATT...TGAACCGACTATAAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CAA 90 bp AGAAAGACTTTCTTTAGAAACATTCAGGTTTGGATTTGGTTGCATATCTATGGGAGCACTTTGGGAGGATaGCTTGAGGACAGGAATTTG +
Preference number: 5 (lower is better)
Translates to: RKTFFRNIQVWIWLHIYGSTLGG*LEDRNL
Trigger: CAAATTCCTGTCCTCAAGCAATCCTCCCAAAGTGCT...CCCATAGATATGCAACCAAATCCAAACCTGAATGTTTCTAAAGAAAGTCTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS-3UTR CAA 90 bp TGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCCATCTGAATTGCTTTaGCCAGATCTTCTTCACCTT +
Preference number: 5 (lower is better)
Translates to: CFKADCKCYLLAHLTSSLPSELL*PDLLHL
Trigger: AAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATGG...CAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp GACGAACCTACATATCATTATCACCCAAAGTCCACAGTTTATATTATTCCTTCTCTTGGGCCATCTGAATaGCTTTTGCCAGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: DEPTYHYHPKSTVYIIPSLGPSE*LLPDLL
Trigger: AAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAG...AGAAGGAATAATATAAACTGTGGACTTTGGGTGATAATGATATGTAGGTTCGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR CAA 90 bp CTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATTTTCAGCACTTGGGCCATCTGAATaGCTTTTGCCAGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: LFAYDAFDENHVLSEFSALGPSE*LLPDLL
Trigger: AAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAG...TGCTGAAAATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000440779.5
ENST00000452556.5
CDS-3UTR CAA 90 bp CCTACATATCATTATCACCCAAAGTCCACAGTTTATATTATTCCTTCTGGAGAAATCTGTAGCCTGTTCTaGGGCCATCTGAATTGCTTT +
Preference number: 5 (lower is better)
Translates to: PTYHYHPKSTVYIIPSGEICSLF*GHLNCF
Trigger: AAAGCAATTCAGATGGCCCAAGAACAGGCTACAGAT...TTCTCCAGAAGGAATAATATAAACTGTGGACTTTGGGTGATAATGATATGTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR CAA 90 bp CCTACATATCATTATCACCCAAAGTCCACAGTTTATATTATTCCTTCTGGAGAACAGGTACTGCATGCTTaGAAGGAAGAACTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: PTYHYHPKSTVYIIPSGEQVLHA*KEELFS
Trigger: GGAAAACAGTTCTTCCTTCAAAGCATGCAGTACCTG...TTCTCCAGAAGGAATAATATAAACTGTGGACTTTGGGTGATAATGATATGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR CAA 90 bp ATGTCCAAAGCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAAGCTTTGTCAGCTGCTaGTTTGTAGTGCTTCAAATC +
Preference number: 5 (lower is better)
Translates to: MSKACFKADCKCYLLAHLSFVSC*FVVLQI
Trigger: GATTTGAAGCACTACAAACAAGCAGCTGACAAAGCT...TAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGCTTTGGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp TCCAAAGCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCTGTTTTACATTTGTTTaGTTCCCTGGCTTCACGAAG +
Preference number: 5 (lower is better)
Translates to: SKACFKADCKCYLLAHLTCFTFV*FPGFTK
Trigger: CTTCGTGAAGCCAGGGAACAAAACAAATGTAAAACA...GGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGCTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp AGCATTTTCTCCTTCAGTAAAGTGTGGTGTTTCTCATGTAACACCCTTATAGTCCATTCAGGTTTGGATTaGGTTGCATATCTATGGGAA +
Preference number: 5 (lower is better)
Translates to: SIFSFSKVWCFSCNTLIVHSGLD*VAYLWE
Trigger: TTCCCATAGATATGCAACCAAATCCAAACCTGAATG...GACTATAAGGGTGTTACATGAGAAACACCACACTTTACTGAAGGAGAAAATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp TGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGTCAAAATTCACCTCATaGCCAGGACTTGGACCTATA +
Preference number: 5 (lower is better)
Translates to: CFKADCKCYLLAHLTSSLSKFTS*PGLGPI
Trigger: TATAGGTCCAAGTCCTGGCAATGAGGTGAATTTTGA...CAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp GGTATAATGACCAGAAGCAGAAGTCCTTCCATTATAGTTGACTTGTTTTTCTCTATTGTCATGCTCTTATaGGCTTCCATCTCCACAAAG +
Preference number: 5 (lower is better)
Translates to: GIMTRSRSPSIIVDLFFSIVMLL*ASISTK
Trigger: CTTTGTGGAGATGGAAGCCAATAAGAGCATGACAAT...AGAGAAAAACAAGTCAACTATAATGGAAGGACTTCTGCTTCTGGTCATTATACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp CTGACATTTCCAATTATCAGGATTGTCATGCTCTTATTGGCTTCCATCTCCACAAAGTGTCAGGTAGTGTaGTTATGTATAGTATTGCAG +
Preference number: 5 (lower is better)
Translates to: LTFPIIRIVMLLLASISTKCQVV*LCIVLQ
Trigger: CTGCAATACTATACATAACAACACTACCTGACACTT...TGTGGAGATGGAAGCCAATAAGAGCATGACAATCCTGATAATTGGAAATGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp GACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATTTTCAGAGCTTTGTCAGCTGCTaGTTTGTAGTGCTTCAAATC +
Preference number: 5 (lower is better)
Translates to: DYSLMMHSMKITFFLNFQSFVSC*FVVLQI
Trigger: GATTTGAAGCACTACAAACAAGCAGCTGACAAAGCT...CTGAAAATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000440779.5
CDS-3UTR CAA 90 bp TGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGTTTCTTCAATGTTTCTaGAAGTCCAGAAATCTGCCC +
Preference number: 5 (lower is better)
Translates to: CFKADCKCYLLAHLTSSLFLQCF*KSRNLP
Trigger: GGGCAGATTTCTGGACTTCAAGAAACATTGAAGAAA...CAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp TTCCTGGACTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATTGTTTTACATTTGTTTaGTTCCCTGGCTTCACGAAG +
Preference number: 5 (lower is better)
Translates to: FLDYSLMMHSMKITFFLNCFTFV*FPGFTK
Trigger: CTTCGTGAAGCCAGGGAACAAAACAAATGTAAAACA...ATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAGTCCAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp ATGTCCAAAGCATGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTACAGGTTTGGATTTGGTaGCATATCTATGGGAAATTC +
Preference number: 5 (lower is better)
Translates to: MSKACFKADCKCYLLAHLQVWIW*HIYGKF
Trigger: GAATTTCCCATAGATATGCAACCAAATCCAAACCTG...TAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACATGCTTTGGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp TGTTTTAAAGCAGACTGTAAATGTTACCTGCTGGCACATTTAACCAGTTCTTTGCATTCAGGTTTGGATTaGGTTGCATATCTATGGGAA +
Preference number: 5 (lower is better)
Translates to: CFKADCKCYLLAHLTSSLHSGLD*VAYLWE
Trigger: TTCCCATAGATATGCAACCAAATCCAAACCTGAATG...CAAAGAACTGGTTAAATGTGCCAGCAGGTAACATTTACAGTCTGCTTTAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331683.10
ENST00000406979.6
CDS-3UTR CAA 90 bp CACAGAATCTGTATGTCCATACAAAGTACATCTGCATCTTTCACTATTAACATCTCAAAATTCACCTCATaGCCAGGACTTGGACCTATA +
Preference number: 5 (lower is better)
Translates to: HRICMSIQSTSASFTINISKFTS*PGLGPI
Trigger: TATAGGTCCAAGTCCTGGCAATGAGGTGAATTTTGA...GATGTTAATAGTGAAAGATGCAGATGTACTTTGTATGGACATACAGATTCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406979.6
ENST00000452556.5
CDS-3UTR CAA 90 bp GGTATAATGACCAGAAGCAGAAGTCCTTCCATTATAGTTGACTTGTTTTTCTCTTCTGGGATGCTAAAATaGTCATCTGGTATCTTGAAG +
Preference number: 5 (lower is better)
Translates to: GIMTRSRSPSIIVDLFFSSGMLK*SSGILK
Trigger: CTTCAAGATACCAGATGACAATTTTAGCATCCCAGA...AGAGAAAAACAAGTCAACTATAATGGAAGGACTTCTGCTTCTGGTCATTATACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS-3UTR CAA 90 bp CGAACCTACATATCATTATCACCCAAAGTCCACAGTTTATATTATTCCTTCTGGAACATACTCAGCTGCTaGTTTGTAGTGCTTCAAATC +
Preference number: 5 (lower is better)
Translates to: RTYISLSPKVHSLYYSFWNILSC*FVVLQI
Trigger: GATTTGAAGCACTACAAACAAGCAGCTGAGTATGTT...CCAGAAGGAATAATATAAACTGTGGACTTTGGGTGATAATGATATGTAGGTTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR CAA 90 bp CTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATTTTCAGCATTTCTTCAATGTTTCTaGAAGTCCAGAAATCTGCCC +
Preference number: 5 (lower is better)
Translates to: LFAYDAFDENHVLSEFSAFLQCF*KSRNLP
Trigger: GGGCAGATTTCTGGACTTCAAGAAACATTGAAGAAA...TGCTGAAAATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406979.6
ENST00000440779.5
ENST00000452556.5
CDS-3UTR CAA 90 bp TTTATTCAACATATAATTGGTGAACATCTCCCATGTACCAGGTACCATGAAAGGAAATTCAGGATTAGTTaGTGGGCAACTGCTTTTATC +
Preference number: 5 (lower is better)
Translates to: FIQHIIGEHLPCTRYHERKFRIS*WATAFI
Trigger: GATAAAAGCAGTTGCCCACAAACTAATCCTGAATTT...CCTTTCATGGTACCTGGTACATGGGAGATGTTCACCAATTATATGTTGAATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420497.6
CDS-3UTR CAA 90 bp CCTACATATCATTATCACCCAAAGTCCACAGTTTATATTATTCCTTCTGGAGAAACCTGCATTCCCTTCTaGTTGGTAAGTTATAATTGT +
Preference number: 5 (lower is better)
Translates to: PTYHYHPKSTVYIIPSGETCIPF*LVSYNC
Trigger: ACAATTATAACTTACCAACAAGAAGGGAATGCAGGT...TTCTCCAGAAGGAATAATATAAACTGTGGACTTTGGGTGATAATGATATGTAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432529.6
CDS-3UTR CAA 90 bp CTATTCGCTTATGATGCATTCGATGAAAATCACGTTCTTTCTGAATTTTCAGCAAACTTGGCACTACTATaGAATGAACCCATTAATGCT +
Preference number: 5 (lower is better)
Translates to: LFAYDAFDENHVLSEFSANLALL*NEPINA
Trigger: AGCATTAATGGGTTCATTCAATAGTAGTGCCAAGTT...TGCTGAAAATTCAGAAAGAACGTGATTTTCATCGAATGCATCATAAGCGAATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452556.5
CDS CCA 72 bp GGCGGAGCTGGGCATCCCTCGCTGAGCAGCCATCTCTaGCGCTTCGGGCCCCCACCCCCAGCAGGCCCACAG +
Preference number: 6 (lower is better)
Translates to: GGAGHPSLSSHL*RFGPPPPAGPQ
Trigger: CTGTGGGCCTGCTGGGGGTGGGGGCCCGAAGCGCCAGAGATGGCTGCTCAGCGAGGGATGCCCAGCTCCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000272898.11
ENST00000406979.6
ENST00000413312.5
ENST00000420497.6
ENST00000432529.6
ENST00000440779.5
CDS TCA 72 bp TCCAGGACCCTCACGGCGGAGCTGGGCATCCCTCGCTaGGCAGCCATCTCTGGCGCTTCGGGCCCCCACCCC +
Preference number: 6 (lower is better)
Translates to: SRTLTAELGIPR*AAISGASGPHP
Trigger: GGGGTGGGGGCCCGAAGCGCCAGAGATGGCTGCTCAGCGAGGGATGCCCAGCTCCGCCGTGAGGGTCCTGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000272898.11
ENST00000406979.6
ENST00000413312.5
ENST00000420497.6
ENST00000432529.6
ENST00000440779.5
ENST00000452556.5
CDS GCA 72 bp CGCCACCGCGTCCGCCGTGTCCCTCGCGTCCCCGGCTaGCGTCAAACCCATGCCCAACGCCTCTTCCAGGAC +
Preference number: 6 (lower is better)
Translates to: RHRVRRVPRVPG*RQTHAQRLFQD
Trigger: GTCCTGGAAGAGGCGTTGGGCATGGGTTTGACGGCAGCCGGGGACGCGAGGGACACGGCGGACGCGGTGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000272898.11
ENST00000331683.10
ENST00000406979.6
ENST00000413312.5
ENST00000420497.6
ENST00000432529.6
ENST00000440779.5
ENST00000447990.1
ENST00000452556.5
CDS CCA 72 bp TGCCCAACGCCTCTTCCAGGACCCTCACGGCGGAGCTaGGCATCCCTCGCTGAGCAGCCATCTCTGGCGCTT +
Preference number: 6 (lower is better)
Translates to: CPTPLPGPSRRS*ASLAEQPSLAL
Trigger: AAGCGCCAGAGATGGCTGCTCAGCGAGGGATGCCCAGCTCCGCCGTGAGGGTCCTGGAAGAGGCGTTGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272898.11
ENST00000331683.10
ENST00000406979.6
ENST00000413312.5
ENST00000420497.6
ENST00000432529.6
ENST00000440779.5
ENST00000452556.5
CDS CCA 72 bp TCCGGAGTGGCCCCAAGGCTCAAAAGGCGCCGCCAGTaGGAGGCCCTCGCCTTCGTCCCAACACCCATTACC +
Preference number: 6 (lower is better)
Translates to: SGVAPRLKRRRQ*EALAFVPTPIT
Trigger: GGTAATGGGTGTTGGGACGAAGGCGAGGGCCTCCCACTGGCGGCGCCTTTTGAGCCTTGGGGCCACTCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS GCA 72 bp GCCTGGAGCTGGATCAGATGCACTCCAAGCAACTTCTaGTGTGGGCACCCAAATCTGGATGAGAATTCAGTG +
Preference number: 6 (lower is better)
Translates to: AWSWIRCTPSNF*CGHPNLDENSV
Trigger: CACTGAATTCTCATCCAGATTTGGGTGCCCACAGCAGAAGTTGCTTGGAGTGCATCTGATCCAGCTCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS CAA 90 bp TGTGGGCACCCAAATCTGGATGAGAATTCAGTGGCGTCTGGATGCTaGGAAACATCTGAAACTGCACAGCCCCAAAGAGGGTGTCACAGC +
Preference number: 6 (lower is better)
Translates to: CGHPNLDENSVASGC*ETSETAQPQRGCHS
Trigger: GCTGTGACACCCTCTTTGGGGCTGTGCAGTTTCAGATGTTTCCAAGCATCCAGACGCCACTGAATTCTCATCCAGATTTGGGTGCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS TCA 72 bp ACATCTGCATCTTTCACTGGGATGGAAGCAGCAGTCTaGAAGCCAGTCAGTGTGGCCAAATCCCGTGAGAAG +
Preference number: 6 (lower is better)
Translates to: TSASFTGMEAAV*KPVSVAKSREK
Trigger: CTTCTCACGGGATTTGGCCACACTGACTGGCTTTCAGACTGCTGCTTCCATCCCAGTGAAAGATGCAGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451561.1
CDS GCA 72 bp TCCAGCCCAGTTGTTCCACTTCTGTGTAAATTCAGCTaGAGGATACAGCCTCCTGATGTCCCGGGAAACACT +
Preference number: 6 (lower is better)
Translates to: SSPVVPLLCKFS*RIQPPDVPGNT
Trigger: AGTGTTTCCCGGGACATCAGGAGGCTGTATCCTGCAGCTGAATTTACACAGAAGTGGAACAACTGGGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480494.1
CDS CCA 72 bp GCACTCCAAGCAACTTCTGCTGTGGGCACCCAAATCTaGATGAGAATTCAGTGGCGTCTGGATGCTTGGAAA +
Preference number: 6 (lower is better)
Translates to: ALQATSAVGTQI*MRIQWRLDAWK
Trigger: TTTCCAAGCATCCAGACGCCACTGAATTCTCATCCAGATTTGGGTGCCCACAGCAGAAGTTGCTTGGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS TCA 72 bp TCCAAGCAACTTCTGCTGTGGGCACCCAAATCTGGATaGGAATTCAGTGGCGTCTGGATGCTTGGAAACATC +
Preference number: 6 (lower is better)
Translates to: SKQLLLWAPKSG*EFSGVWMLGNI
Trigger: GATGTTTCCAAGCATCCAGACGCCACTGAATTCTCATCCAGATTTGGGTGCCCACAGCAGAAGTTGCTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS CCA 72 bp TCTGCTGTGGGCACCCAAATCTGGATGAGAATTCAGTaGCGTCTGGATGCTTGGAAACATCTGAAACTGCAC +
Preference number: 6 (lower is better)
Translates to: SAVGTQIWMRIQ*RLDAWKHLKLH
Trigger: GTGCAGTTTCAGATGTTTCCAAGCATCCAGACGCCACTGAATTCTCATCCAGATTTGGGTGCCCACAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS CAA 72 bp CCAAATCTGGATGAGAATTCAGTGGCGTCTGGATGCTaGGAAACATCTGAAACTGCACAGCCCCAAAGAGGG +
Preference number: 6 (lower is better)
Translates to: PNLDENSVASGC*ETSETAQPQRG
Trigger: CCCTCTTTGGGGCTGTGCAGTTTCAGATGTTTCCAAGCATCCAGACGCCACTGAATTCTCATCCAGATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS GCA 72 bp CACCCAAATCTGGATGAGAATTCAGTGGCGTCTGGATaGTTGGAAACATCTGAAACTGCACAGCCCCAAAGA +
Preference number: 6 (lower is better)
Translates to: HPNLDENSVASG*LETSETAQPQR
Trigger: TCTTTGGGGCTGTGCAGTTTCAGATGTTTCCAAGCATCCAGACGCCACTGAATTCTCATCCAGATTTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS CCA 72 bp CAAATCTGGATGAGAATTCAGTGGCGTCTGGATGCTTaGAAACATCTGAAACTGCACAGCCCCAAAGAGGGT +
Preference number: 6 (lower is better)
Translates to: QIWMRIQWRLDA*KHLKLHSPKEG
Trigger: ACCCTCTTTGGGGCTGTGCAGTTTCAGATGTTTCCAAGCATCCAGACGCCACTGAATTCTCATCCAGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447990.1
CDS CAA 90 bp TCCATACAAAGTACATCTGCATCTTTCATAGAGCTTCCAGCCCAGTaGTTCCACTTCTGTGTAAATTCAGCTGCAGGATACAGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: SIQSTSASFIELPAQ*FHFCVNSAAGYSLL
Trigger: CAGGAGGCTGTATCCTGCAGCTGAATTTACACAGAAGTGGAACAACTGGGCTGGAAGCTCTATGAAAGATGCAGATGTACTTTGTATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480494.1
CDS CAA 72 bp TTTGCCAGATCTTCTTCACCTTCTGGGATGCTAAAATaGTCATCTGGTATCTTGAAGTCCAACAGAGGCTCC +
Preference number: 6 (lower is better)
Translates to: FARSSSPSGMLK*SSGILKSNRGS
Trigger: GGAGCCTCTGTTGGACTTCAAGATACCAGATGACAATTTTAGCATCCCAGAAGGTGAAGAAGATCTGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413312.5
CDS CAA 72 bp AGTACATCTGCATCTTTCATAGAGCTTCCAGCCCAGTaGTTCCACTTCTGTGTAAATTCAGCTGCAGGATAC +
Preference number: 6 (lower is better)
Translates to: STSASFIELPAQ*FHFCVNSAAGY
Trigger: GTATCCTGCAGCTGAATTTACACAGAAGTGGAACAACTGGGCTGGAAGCTCTATGAAAGATGCAGATGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480494.1
CDS GCA 72 bp ATCTGGTATCTCTTCATATTCATAGTCATCTTCAGATaGTTCAGTTATGGTGACCTGTTCCAGGTAGTAGGC +
Preference number: 6 (lower is better)
Translates to: IWYLFIFIVIFR*FSYGDLFQVVG
Trigger: GCCTACTACCTGGAACAGGTCACCATAACTGAAGCATCTGAAGATGACTATGAATATGAAGAGATACCAGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272898.11
ENST00000331683.10
ENST00000432529.6
ENST00000440779.5
ENST00000447990.1
CDS GCA 72 bp TGTTCACAGAATCTGTATGTCCATACAAAGTACATCTaGATCTTTCATAGAGCTTCCAGCCCAGTTGTTCCA +
Preference number: 6 (lower is better)
Translates to: CSQNLYVHTKYI*IFHRASSPVVP
Trigger: TGGAACAACTGGGCTGGAAGCTCTATGAAAGATGCAGATGTACTTTGTATGGACATACAGATTCTGTGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480494.1
CDS CAA 90 bp TTCTGTATTAACTCATACCAAAATTTCAGTATCTGTAGCCTGTTCTaGGGCCATCTGAATTGCTTTTGCCAGATCTTCTTCACCTTCTGG +
Preference number: 6 (lower is better)
Translates to: FCINSYQNFSICSLF*GHLNCFCQIFFTFW
Trigger: CCAGAAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATGGCCCAAGAACAGGCTACAGATACTGAAATTTTGGTATGAGTTAATACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440779.5
CDS CCA 72 bp CATCTGAATTGCTTTTGCCAGATCTTCTTCACCTTCTaGGATGCTAAAATTGTCATCTGGTATCTTGAAGTC +
Preference number: 6 (lower is better)
Translates to: HLNCFCQIFFTF*DAKIVIWYLEV
Trigger: GACTTCAAGATACCAGATGACAATTTTAGCATCCCAGAAGGTGAAGAAGATCTGGCAAAAGCAATTCAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413312.5