Pregenerated sensors for SPACA4 (Homo sapiens)
Ensembl gene IDs: ENSG00000177202Ensembl transcript IDs: ENST00000321762.3
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCGCTCAGTCAGGCCTGGGGATGCTTCCCCTAGCACCGGGCTCCTaGTGGACAGCCTTAGAAGGGATGAAGCCAGGGCCGCAAGAGGTT | + |
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Preference number: 1 (lower is better) Translates to: AAQSGLGMLPLAPGS*WTALEGMKPGPQEV Trigger: AACCTCTTGCGGCCCTGGCTTCATCCCTTCTAAGGCTGTCCACCAGGAGCCCGGTGCTAGGGGAAGCATCCCCAGGCCTGACTGAGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| 3UTR CCA 90 bp | GCTCAGTCAGGCCTGGGGATGCTTCCCCTAGCACCGGGCTCCTGGTaGACAGCCTTAGAAGGGATGAAGCCAGGGCCGCAAGAGGTTGTC | + |
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Preference number: 1 (lower is better) Translates to: AQSGLGMLPLAPGSW*TALEGMKPGPQEVV Trigger: GACAACCTCTTGCGGCCCTGGCTTCATCCCTTCTAAGGCTGTCCACCAGGAGCCCGGTGCTAGGGGAAGCATCCCCAGGCCTGACTGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| 3UTR TCA 90 bp | CATATTTCATGGACTCTAAAGTGCTACCAATGGAGAGAAGCATCCTaGTTGAGATGTGAGAAGCTCTGCGTCTTAGAACCAGTGGAACAG | + |
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Preference number: 1 (lower is better) Translates to: HISWTLKCYQWREAS*LRCEKLCVLEPVEQ Trigger: CTGTTCCACTGGTTCTAAGACGCAGAGCTTCTCACATCTCAATCAGGATGCTTCTCTCCATTGGTAGCACTTTAGAGTCCATGAAATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| 3UTR-3UTR CCA 90 bp | GCCGCTCAGTCAGGCCTGGGGATGCTTCCCCTAGCACCGGGCTCCTGGTGGACATGGGGACATGGGGAGTaGCGGATCTGGGAGAACAGT | + |
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Preference number: 2 (lower is better) Translates to: AAQSGLGMLPLAPGSWWTWGHGE*RIWENS Trigger: ACTGTTCTCCCAGATCCGCCACTCCCCATGTCCCCA...TGTCCACCAGGAGCCCGGTGCTAGGGGAAGCATCCCCAGGCCTGACTGAGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| 3UTR-3UTR CCA 90 bp | AATCAAACCCACGGGCCGTGCTCCCCTGCCGCTCAGTCAGGCCTGGGGATGCTTGCACCGGGCTCCTGGTaGACAGCCTTAGAAGGGATG | + |
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Preference number: 2 (lower is better) Translates to: NQTHGPCSPAAQSGLGMLAPGSW*TALEGM Trigger: CATCCCTTCTAAGGCTGTCCACCAGGAGCCCGGTGC...AAGCATCCCCAGGCCTGACTGAGCGGCAGGGGAGCACGGCCCGTGGGTTTGATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| 3UTR-3UTR CCA 90 bp | AGCACCGGGCTCCTGGTGGACAGCCTTAGAAGGGATGAAGCCAGGGCCGCAAGATGTCCAGGGCCTCTCTaGCCATTTAGTGGGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: STGLLVDSLRRDEARAARCPGPL*PFSGGR Trigger: CCTTCCCCCACTAAATGGCCAGAGAGGCCCTGGACA...TCTTGCGGCCCTGGCTTCATCCCTTCTAAGGCTGTCCACCAGGAGCCCGGTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| 3UTR-3UTR CCA 90 bp | AACAGAGTAATACAATCAAACCCACGGGCCGTGCTCCCCTGCCGCTCAGTCAGGAAGGACATGGGGACATaGGGAGTGGCGGATCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: NRVIQSNPRAVLPCRSVRKDMGT*GVADLG Trigger: TCCCAGATCCGCCACTCCCCATGTCCCCATGTCCTT...CCTGACTGAGCGGCAGGGGAGCACGGCCCGTGGGTTTGATTGTATTACTCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| 3UTR-3UTR CAA 90 bp | TGCCGCTCAGTCAGGCCTGGGGATGCTTCCCCTAGCACCGGGCTCCTGGTGGACCAGGGCCGCAAGAGGTaGTCCAGGGCCTCTCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: CRSVRPGDASPSTGLLVDQGRKR*SRASLA Trigger: GGCCAGAGAGGCCCTGGACAACCTCTTGCGGCCCTG...GTCCACCAGGAGCCCGGTGCTAGGGGAAGCATCCCCAGGCCTGACTGAGCGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| 3UTR CCA 72 bp | GGCCTGGGGATGCTTCCCCTAGCACCGGGCTCCTGGTaGACAGCCTTAGAAGGGATGAAGCCAGGGCCGCAA | + |
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Preference number: 3 (lower is better) Translates to: GLGMLPLAPGSW*TALEGMKPGPQ Trigger: TTGCGGCCCTGGCTTCATCCCTTCTAAGGCTGTCCACCAGGAGCCCGGTGCTAGGGGAAGCATCCCCAGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| 3UTR CCA 72 bp | TCAGGCCTGGGGATGCTTCCCCTAGCACCGGGCTCCTaGTGGACAGCCTTAGAAGGGATGAAGCCAGGGCCG | + |
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Preference number: 3 (lower is better) Translates to: SGLGMLPLAPGS*WTALEGMKPGP Trigger: CGGCCCTGGCTTCATCCCTTCTAAGGCTGTCCACCAGGAGCCCGGTGCTAGGGGAAGCATCCCCAGGCCTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| 3UTR TCA 72 bp | TGGACTCTAAAGTGCTACCAATGGAGAGAAGCATCCTaGTTGAGATGTGAGAAGCTCTGCGTCTTAGAACCA | + |
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Preference number: 3 (lower is better) Translates to: WTLKCYQWREAS*LRCEKLCVLEP Trigger: TGGTTCTAAGACGCAGAGCTTCTCACATCTCAATCAGGATGCTTCTCTCCATTGGTAGCACTTTAGAGTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR GCA 90 bp | GCCGCTCAGTCAGGCCTGGGGATGCTTCCCCTAGCACCGGGCTCCTGGTGGACACGGGCCGTGCTCCCCTaGCGCTCAGTCAGGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: AAQSGLGMLPLAPGSWWTRAVLP*RSVRPG Trigger: CCCAGGCCTGACTGAGCGGCAGGGGAGCACGGCCCG...TGTCCACCAGGAGCCCGGTGCTAGGGGAAGCATCCCCAGGCCTGACTGAGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | GCCGCTCAGTCAGGCCTGGGGATGCTTCCCCTAGCACCGGGCTCCTGGTGGACAGCCCCAGCCAGGCCGTaGGCTTCCCAGACCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: AAQSGLGMLPLAPGSWWTAPARP*ASQTSR Trigger: CCGGGAGGTCTGGGAAGCCCACGGCCTGGCTGGGGC...TGTCCACCAGGAGCCCGGTGCTAGGGGAAGCATCCCCAGGCCTGACTGAGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | TGCCGCTCAGTCAGGCCTGGGGATGCTTCCCCTAGCACCGGGCTCCTGGTGGACGACGCCCGTCGTGCCTaGGGGCAGAGCCATCACCAG | + |
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Preference number: 4 (lower is better) Translates to: CRSVRPGDASPSTGLLVDDARRA*GQSHHQ Trigger: CTGGTGATGGCTCTGCCCCCAGGCACGACGGGCGTC...GTCCACCAGGAGCCCGGTGCTAGGGGAAGCATCCCCAGGCCTGACTGAGCGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | ATCAAACCCACGGGCCGTGCTCCCCTGCCGCTCAGTCAGGCCTGGGGATGCTTCCCAGTGCCAGGCTGGTaGTGGCCCCCACTGTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: IKPTGRAPLPLSQAWGCFPVPGW*WPPLSG Trigger: GCCAGACAGTGGGGGCCACCACCAGCCTGGCACTGG...GAAGCATCCCCAGGCCTGACTGAGCGGCAGGGGAGCACGGCCCGTGGGTTTGAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | CAGTCAGGCCTGGGGATGCTTCCCCTAGCACCGGGCTCCTGGTGGACAGCCTTACTTTGGCCCTGGTCCTaGCCTCCCAGGGTCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: QSGLGMLPLAPGSWWTALLWPWS*PPRVSA Trigger: GGCGCTGACCCTGGGAGGCCAGGACCAGGGCCAAAG...TAAGGCTGTCCACCAGGAGCCCGGTGCTAGGGGAAGCATCCCCAGGCCTGACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | CCTAGCACCGGGCTCCTGGTGGACAGCCTTAGAAGGGATGAAGCCAGGGCCGCAGTGCCAGGCTGGTGGTaGCCCCCACTGTCTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PSTGLLVDSLRRDEARAAVPGWW*PPLSGC Trigger: GCAGCCAGACAGTGGGGGCCACCACCAGCCTGGCAC...TGCGGCCCTGGCTTCATCCCTTCTAAGGCTGTCCACCAGGAGCCCGGTGCTAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR TCA 90 bp | ACATGGGGAGTGGCGGATCTGGGAGAACAGTCCCAGGCCCTGTCCTCCCTGTTGTCCTGGGGATGGAGGTaGGCGGGTGGCTGCTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: TWGVADLGEQSQALSSLLSWGWR*AGGCCP Trigger: TGGGCAGCAGCCACCCGCTCACCTCCATCCCCAGGA...CAACAGGGAGGACAGGGCCTGGGACTGTTCTCCCAGATCCGCCACTCCCCATGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | ACCGGGCTCCTGGTGGACAGCCTTAGAAGGGATGAAGCCAGGGCCGCAAGAGGTGCCAGCACAGGACCATaGCGGCCTGGCGGCGTTGAC | + |
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Preference number: 4 (lower is better) Translates to: TGLLVDSLRRDEARAARGASTGP*RPGGVD Trigger: GTCAACGCCGCCAGGCCGCCATGGTCCTGTGCTGGC...ACCTCTTGCGGCCCTGGCTTCATCCCTTCTAAGGCTGTCCACCAGGAGCCCGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR TCA 90 bp | AATACAATCAAACCCACGGGCCGTGCTCCCCTGCCGCTCAGTCAGGCCTGGGGAAGAAGACGCAGTCCTTaGCGCCCGTCGTGCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: NTIKPTGRAPLPLSQAWGRRRSP*RPSCLG Trigger: CCCCAGGCACGACGGGCGTCAAGGACTGCGTCTTCT...TCCCCAGGCCTGACTGAGCGGCAGGGGAGCACGGCCCGTGGGTTTGATTGTATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | AGCACCGGGCTCCTGGTGGACAGCCTTAGAAGGGATGAAGCCAGGGCCGCAAGACCTCAAGGCCGCAGCTaGTGGCTCGCAGGCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: STGLLVDSLRRDEARAARPQGRS*WLAGSL Trigger: AAGGCTGCCTGCGAGCCACCAGCTGCGGCCTTGAGG...TCTTGCGGCCCTGGCTTCATCCCTTCTAAGGCTGTCCACCAGGAGCCCGGTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | TGCCGCTCAGTCAGGCCTGGGGATGCTTCCCCTAGCACCGGGCTCCTGGTGGACTGTCCAGGGCCTCTCTaGCCATTTAGTGGGGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: CRSVRPGDASPSTGLLVDCPGPL*PFSGGR Trigger: CCTTCCCCCACTAAATGGCCAGAGAGGCCCTGGACA...GTCCACCAGGAGCCCGGTGCTAGGGGAAGCATCCCCAGGCCTGACTGAGCGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | CAGTCAGGCCTGGGGATGCTTCCCCTAGCACCGGGCTCCTGGTGGACAGCCTTACCCAGGGTCAGCGCCTaGAGTGTCCTCTGTTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: QSGLGMLPLAPGSWWTALPRVSA*SVLCSQ Trigger: TTGGGAACAGAGGACACTCCAGGCGCTGACCCTGGG...TAAGGCTGTCCACCAGGAGCCCGGTGCTAGGGGAAGCATCCCCAGGCCTGACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | AACAGAGTAATACAATCAAACCCACGGGCCGTGCTCCCCTGCCGCTCAGTCAGGCCCGGGGCGACCCCGTaGCCTGTGAAGCAGTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: NRVIQSNPRAVLPCRSVRPGATP*PVKQSS Trigger: CGAGGACTGCTTCACAGGCCACGGGGTCGCCCCGGG...CCTGACTGAGCGGCAGGGGAGCACGGCCCGTGGGTTTGATTGTATTACTCTGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | ATCAAACCCACGGGCCGTGCTCCCCTGCCGCTCAGTCAGGCCTGGGGATGCTTCAAGGACATGGGGACATaGGGAGTGGCGGATCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: IKPTGRAPLPLSQAWGCFKDMGT*GVADLG Trigger: TCCCAGATCCGCCACTCCCCATGTCCCCATGTCCTT...GAAGCATCCCCAGGCCTGACTGAGCGGCAGGGGAGCACGGCCCGTGGGTTTGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR TCA 90 bp | GCAAGAGGTTGTCCAGGGCCTCTCTGGCCATTTAGTGGGGGAAGGACATGGGGACGACCCCGTGGCCTGTaGAGCAGTCCTCGTCATCGC | + |
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Preference number: 4 (lower is better) Translates to: ARGCPGPLWPFSGGRTWGRPRGL*SSPRHR Trigger: GCGATGACGAGGACTGCTTCACAGGCCACGGGGTCG...TCCCCATGTCCTTCCCCCACTAAATGGCCAGAGAGGCCCTGGACAACCTCTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR GCA 90 bp | CCTAGCACCGGGCTCCTGGTGGACAGCCTTAGAAGGGATGAAGCCAGGGCCGCATCTGAGGACTCCTCTTaGCCACGGGACTTTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: PSTGLLVDSLRRDEARAASEDSS*PRDFGP Trigger: AGGGCCAAAGTCCCGTGGGCAAGAGGAGTCCTCAGA...TGCGGCCCTGGCTTCATCCCTTCTAAGGCTGTCCACCAGGAGCCCGGTGCTAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR GCA 90 bp | AGCACCGGGCTCCTGGTGGACAGCCTTAGAAGGGATGAAGCCAGGGCCGCAAGACCCCCACTGTCTGGCTaGTCGGGGCTCTGTTACACA | + |
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Preference number: 4 (lower is better) Translates to: STGLLVDSLRRDEARAARPPLSG*SGLCYT Trigger: TGTGTAACAGAGCCCCGAGCAGCCAGACAGTGGGGG...TCTTGCGGCCCTGGCTTCATCCCTTCTAAGGCTGTCCACCAGGAGCCCGGTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | CAGTCAGGCCTGGGGATGCTTCCCCTAGCACCGGGCTCCTGGTGGACAGCCTTATGGGGACATGGGGAGTaGCGGATCTGGGAGAACAGT | + |
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Preference number: 4 (lower is better) Translates to: QSGLGMLPLAPGSWWTALWGHGE*RIWENS Trigger: ACTGTTCTCCCAGATCCGCCACTCCCCATGTCCCCA...TAAGGCTGTCCACCAGGAGCCCGGTGCTAGGGGAAGCATCCCCAGGCCTGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | AATACAATCAAACCCACGGGCCGTGCTCCCCTGCCGCTCAGTCAGGCCTGGGGACTAGCACCGGGCTCCTaGTGGACAGCCTTAGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: NTIKPTGRAPLPLSQAWGLAPGS*WTALEG Trigger: CCCTTCTAAGGCTGTCCACCAGGAGCCCGGTGCTAG...TCCCCAGGCCTGACTGAGCGGCAGGGGAGCACGGCCCGTGGGTTTGATTGTATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | AACAGAGTAATACAATCAAACCCACGGGCCGTGCTCCCCTGCCGCTCAGTCAGGTTGCCCACGGGACTTTaGCCCTGGTCCTGGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: NRVIQSNPRAVLPCRSVRLPTGL*PWSWPP Trigger: GGGAGGCCAGGACCAGGGCCAAAGTCCCGTGGGCAA...CCTGACTGAGCGGCAGGGGAGCACGGCCCGTGGGTTTGATTGTATTACTCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | CAAGAGGTTGTCCAGGGCCTCTCTGGCCATTTAGTGGGGGAAGGACATGGGGACCAAGGCCGCAGCTGGTaGCTCGCAGGCAGCCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: QEVVQGLSGHLVGEGHGDQGRSW*LAGSLC Trigger: ACAAAGGCTGCCTGCGAGCCACCAGCTGCGGCCTTG...GTCCCCATGTCCTTCCCCCACTAAATGGCCAGAGAGGCCCTGGACAACCTCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR GCA 90 bp | CAAGAGGTTGTCCAGGGCCTCTCTGGCCATTTAGTGGGGGAAGGACATGGGGACCTGTTCCCAACGCCCTaGGTCCCTCTAAGTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QEVVQGLSGHLVGEGHGDLFPTP*VPLSPG Trigger: CCCAGGACTTAGAGGGACGCAGGGCGTTGGGAACAG...GTCCCCATGTCCTTCCCCCACTAAATGGCCAGAGAGGCCCTGGACAACCTCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR TCA 90 bp | TGCCGCTCAGTCAGGCCTGGGGATGCTTCCCCTAGCACCGGGCTCCTGGTGGACATCCTGATTGAGATGTaGGAAGCTCTGCGTCTTAGA | + |
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Preference number: 4 (lower is better) Translates to: CRSVRPGDASPSTGLLVDILIEM*EALRLR Trigger: TCTAAGACGCAGAGCTTCTCACATCTCAATCAGGAT...GTCCACCAGGAGCCCGGTGCTAGGGGAAGCATCCCCAGGCCTGACTGAGCGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR GCA 90 bp | TTAGAACCAGTGGAACAGAGTAATACAATCAAACCCACGGGCCGTGCTCCCCTGCATACCCAGCCCCAGTaGCAGGCTGGTGGTGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LEPVEQSNTIKPTGRAPLHTQPQ*QAGGGP Trigger: GGGGCCACCACCAGCCTGGCACTGGGGCTGGGTATG...CAGGGGAGCACGGCCCGTGGGTTTGATTGTATTACTCTGTTCCACTGGTTCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | GAGGTTGTCCAGGGCCTCTCTGGCCATTTAGTGGGGGAAGGACATGGGGACATGATGGAGGTGAGCGGGTaGCTGCTGCCCAACAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: EVVQGLSGHLVGEGHGDMMEVSG*LLPNKS Trigger: ACTCTTGTTGGGCAGCAGCCACCCGCTCACCTCCAT...CATGTCCCCATGTCCTTCCCCCACTAAATGGCCAGAGAGGCCCTGGACAACCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | GTCTTAGAACCAGTGGAACAGAGTAATACAATCAAACCCACGGGCCGTGCTCCCGCCCCAGTGCCAGGCTaGTGGTGGCCCCCACTGTCT | + |
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Preference number: 4 (lower is better) Translates to: VLEPVEQSNTIKPTGRAPAPVPG*WWPPLS Trigger: AGACAGTGGGGGCCACCACCAGCCTGGCACTGGGGC...GGGAGCACGGCCCGTGGGTTTGATTGTATTACTCTGTTCCACTGGTTCTAAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR TCA 90 bp | GAGGTTGTCCAGGGCCTCTCTGGCCATTTAGTGGGGGAAGGACATGGGGACATGGAGAAGCATCCTGATTaGGATGTGAGAAGCTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: EVVQGLSGHLVGEGHGDMEKHPD*DVRSSA Trigger: CGCAGAGCTTCTCACATCTCAATCAGGATGCTTCTC...CATGTCCCCATGTCCTTCCCCCACTAAATGGCCAGAGAGGCCCTGGACAACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR TCA 90 bp | GAGGTTGTCCAGGGCCTCTCTGGCCATTTAGTGGGGGAAGGACATGGGGACATGTGGAGAGAAGCATCCTaGTTGAGATGTGAGAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: EVVQGLSGHLVGEGHGDMWREAS*LRCEKL Trigger: GAGCTTCTCACATCTCAATCAGGATGCTTCTCTCCA...CATGTCCCCATGTCCTTCCCCCACTAAATGGCCAGAGAGGCCCTGGACAACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR GCA 90 bp | CAAGAGGTTGTCCAGGGCCTCTCTGGCCATTTAGTGGGGGAAGGACATGGGGACTCATGGACTCTAAAGTaGTACCAATGGAGAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: QEVVQGLSGHLVGEGHGDSWTLK*YQWREA Trigger: TGCTTCTCTCCATTGGTAGCACTTTAGAGTCCATGA...GTCCCCATGTCCTTCCCCCACTAAATGGCCAGAGAGGCCCTGGACAACCTCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR GCA 90 bp | TATTTCATGGACTCTAAAGTGCTACCAATGGAGAGAAGCATCCTGATTGAGATGCAAACCCACGGGCCGTaGTCCCCTGCCGCTCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: YFMDSKVLPMERSILIEMQTHGP*SPAAQS Trigger: TGACTGAGCGGCAGGGGAGCACGGCCCGTGGGTTTG...CATCTCAATCAGGATGCTTCTCTCCATTGGTAGCACTTTAGAGTCCATGAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CCA 90 bp | TGTGAGAAGCTCTGCGTCTTAGAACCAGTGGAACAGAGTAATACAATCAAACCCGCACCGGGCTCCTGGTaGACAGCCTTAGAAGGGATG | + |
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Preference number: 4 (lower is better) Translates to: CEKLCVLEPVEQSNTIKPAPGSW*TALEGM Trigger: CATCCCTTCTAAGGCTGTCCACCAGGAGCCCGGTGC...GGGTTTGATTGTATTACTCTGTTCCACTGGTTCTAAGACGCAGAGCTTCTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR TCA 90 bp | TGTGAGAAGCTCTGCGTCTTAGAACCAGTGGAACAGAGTAATACAATCAAACCCACTGCATGGAGTCGGTaGGCTCACAGAAGACGCAGT | + |
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Preference number: 4 (lower is better) Translates to: CEKLCVLEPVEQSNTIKPTAWSR*AHRRRS Trigger: ACTGCGTCTTCTGTGAGCTCACCGACTCCATGCAGT...GGGTTTGATTGTATTACTCTGTTCCACTGGTTCTAAGACGCAGAGCTTCTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR GCA 90 bp | TATTTCATGGACTCTAAAGTGCTACCAATGGAGAGAAGCATCCTGATTGAGATGAGATGTGAGAAGCTCTaGGTCTTAGAACCAGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: YFMDSKVLPMERSILIEMRCEKL*VLEPVE Trigger: TTCCACTGGTTCTAAGACGCAGAGCTTCTCACATCT...CATCTCAATCAGGATGCTTCTCTCCATTGGTAGCACTTTAGAGTCCATGAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS TCA 90 bp | ACCAGAAGCAGCAGCCAGCACAGGACCATGGCGGCCTGGCGGCGTTaGCCCTGCCCCAGCCAGGCCGTGGGCTTCCCAGACCTCCCGGAA | + |
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Preference number: 5 (lower is better) Translates to: TRSSSQHRTMAAWRR*PCPSQAVGFPDLPE Trigger: TTCCGGGAGGTCTGGGAAGCCCACGGCCTGGCTGGGGCAGGGTCAACGCCGCCAGGCCGCCATGGTCCTGTGCTGGCTGCTGCTTCTGGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CAA 90 bp | TGCCGCTCAGTCAGGCCTGGGGATGCTTCCCCTAGCACCGGGCTCCTGGTGGACCAGAAGACGCAGTCCTaGACGCCCGTCGTGCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: CRSVRPGDASPSTGLLVDQKTQS*TPVVPG Trigger: CCCAGGCACGACGGGCGTCAAGGACTGCGTCTTCTG...GTCCACCAGGAGCCCGGTGCTAGGGGAAGCATCCCCAGGCCTGACTGAGCGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS GCA 90 bp | GCCTCCCAGGGTCAGCGCCTGGAGTGTCCTCTGTTCCCAACGCCCTaGGTCCCTCTAAGTCCTGGGGATGGAGGTGAGCGGGTGGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: ASQGQRLECPLFPTP*VPLSPGDGGERVAA Trigger: AGCAGCCACCCGCTCACCTCCATCCCCAGGACTTAGAGGGACGCAGGGCGTTGGGAACAGAGGACACTCCAGGCGCTGACCCTGGGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CAA 90 bp | ACCGGGCTCCTGGTGGACAGCCTTAGAAGGGATGAAGCCAGGGCCGCAAGAGGTCTTGCCCACGGGACTTaGGCCCTGGTCCTGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: TGLLVDSLRRDEARAARGLAHGT*ALVLAS Trigger: GGAGGCCAGGACCAGGGCCAAAGTCCCGTGGGCAAG...ACCTCTTGCGGCCCTGGCTTCATCCCTTCTAAGGCTGTCCACCAGGAGCCCGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CAA 90 bp | TGCCGCTCAGTCAGGCCTGGGGATGCTTCCCCTAGCACCGGGCTCCTGGTGGACGCCCTGTCCTCCCTGTaGGTCACAGCAAACGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: CRSVRPGDASPSTGLLVDALSSL*VTANVE Trigger: CTCCACGTTTGCTGTGACCAACAGGGAGGACAGGGC...GTCCACCAGGAGCCCGGTGCTAGGGGAAGCATCCCCAGGCCTGACTGAGCGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CAA 90 bp | CCTAGCACCGGGCTCCTGGTGGACAGCCTTAGAAGGGATGAAGCCAGGGCCGCAGCTCGCAGGCAGCCTTaGTTGATGACCGGACCAGTG | + |
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Preference number: 5 (lower is better) Translates to: PSTGLLVDSLRRDEARAAARRQP*LMTGPV Trigger: CACTGGTCCGGTCATCAACAAAGGCTGCCTGCGAGC...TGCGGCCCTGGCTTCATCCCTTCTAAGGCTGTCCACCAGGAGCCCGGTGCTAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CAA 90 bp | CAAGAGGTTGTCCAGGGCCTCTCTGGCCATTTAGTGGGGGAAGGACATGGGGACCGCAGGCAGCCTTTGTaGATGACCGGACCAGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: QEVVQGLSGHLVGEGHGDRRQPL*MTGPVP Trigger: GGGCACTGGTCCGGTCATCAACAAAGGCTGCCTGCG...GTCCCCATGTCCTTCCCCCACTAAATGGCCAGAGAGGCCCTGGACAACCTCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS-3UTR CAA 90 bp | GTCTTAGAACCAGTGGAACAGAGTAATACAATCAAACCCACGGGCCGTGCTCCCCAGGGCCGCAAGAGGTaGTCCAGGGCCTCTCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: VLEPVEQSNTIKPTGRAPQGRKR*SRASLA Trigger: GGCCAGAGAGGCCCTGGACAACCTCTTGCGGCCCTG...GGGAGCACGGCCCGTGGGTTTGATTGTATTACTCTGTTCCACTGGTTCTAAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS CAA 90 bp | CTGACGGGTTCCTCAAGGCCGCAGCTGGTGGCTCGCAGGCAGCCTTaGTTGATGACCGGACCAGTGCCCGGGGCGACCCCGTGGCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LTGSSRPQLVARRQP*LMTGPVPGATPWPV Trigger: CACAGGCCACGGGGTCGCCCCGGGCACTGGTCCGGTCATCAACAAAGGCTGCCTGCGAGCCACCAGCTGCGGCCTTGAGGAACCCGTCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS CAA 72 bp | TCAAGGCCGCAGCTGGTGGCTCGCAGGCAGCCTTTGTaGATGACCGGACCAGTGCCCGGGGCGACCCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: SRPQLVARRQPL*MTGPVPGATPW Trigger: CCACGGGGTCGCCCCGGGCACTGGTCCGGTCATCAACAAAGGCTGCCTGCGAGCCACCAGCTGCGGCCTTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS CAA 72 bp | TCCTCAAGGCCGCAGCTGGTGGCTCGCAGGCAGCCTTaGTTGATGACCGGACCAGTGCCCGGGGCGACCCCG | + |
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Preference number: 6 (lower is better) Translates to: SSRPQLVARRQP*LMTGPVPGATP Trigger: CGGGGTCGCCCCGGGCACTGGTCCGGTCATCAACAAAGGCTGCCTGCGAGCCACCAGCTGCGGCCTTGAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS CAA 90 bp | ACGGGTTCCTCAAGGCCGCAGCTGGTGGCTCGCAGGCAGCCTTTGTaGATGACCGGACCAGTGCCCGGGGCGACCCCGTGGCCTGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: TGSSRPQLVARRQPL*MTGPVPGATPWPVK Trigger: CTTCACAGGCCACGGGGTCGCCCCGGGCACTGGTCCGGTCATCAACAAAGGCTGCCTGCGAGCCACCAGCTGCGGCCTTGAGGAACCCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS CCA 72 bp | GGACTCCTCTTGCCCACGGGACTTTGGCCCTGGTCCTaGCCTCCCAGGGTCAGCGCCTGGAGTGTCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: GLLLPTGLWPWS*PPRVSAWSVLC Trigger: ACAGAGGACACTCCAGGCGCTGACCCTGGGAGGCCAGGACCAGGGCCAAAGTCCCGTGGGCAAGAGGAGTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS GCA 72 bp | GGTCAGCGCCTGGAGTGTCCTCTGTTCCCAACGCCCTaGGTCCCTCTAAGTCCTGGGGATGGAGGTGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: GQRLECPLFPTP*VPLSPGDGGER Trigger: CCGCTCACCTCCATCCCCAGGACTTAGAGGGACGCAGGGCGTTGGGAACAGAGGACACTCCAGGCGCTGACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS CCA 72 bp | TTGTTGATGACCGGACCAGTGCCCGGGGCGACCCCGTaGCCTGTGAAGCAGTCCTCGTCATCGCCACAGTGC | + |
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Preference number: 6 (lower is better) Translates to: LLMTGPVPGATP*PVKQSSSSPQC Trigger: GCACTGTGGCGATGACGAGGACTGCTTCACAGGCCACGGGGTCGCCCCGGGCACTGGTCCGGTCATCAACAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS CAA 72 bp | TGCATGGAGTCGGTGAGCTCACAGAAGACGCAGTCCTaGACGCCCGTCGTGCCTGGGGGCAGAGCCATCACC | + |
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Preference number: 6 (lower is better) Translates to: CMESVSSQKTQS*TPVVPGGRAIT Trigger: GGTGATGGCTCTGCCCCCAGGCACGACGGGCGTCAAGGACTGCGTCTTCTGTGAGCTCACCGACTCCATGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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| CDS TCA 72 bp | AACGCCCTGCGTCCCTCTAAGTCCTGGGGATGGAGGTaGGCGGGTGGCTGCTGCCCAACAAGAGTCTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: NALRPSKSWGWR*AGGCCPTRVCE Trigger: TTCACAGACTCTTGTTGGGCAGCAGCCACCCGCTCACCTCCATCCCCAGGACTTAGAGGGACGCAGGGCGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321762.3 |
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