RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SP7 (Homo sapiens)

Ensembl gene IDs: ENSG00000170374

Ensembl transcript IDs: ENST00000303846.3, ENST00000536324.4, ENST00000537210.2, ENST00000547755.1

Found 290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCACTGGAGGTGGAGATGGGAGCATCCAAAGTCCCAGGGTGGGGGTaGGTGGATGCACCACCAGATCAGCTTGGGGGCCTCTGTCCTCCT +
Preference number: 1 (lower is better)
Translates to: SLEVEMGASKVPGWG*VDAPPDQLGGLCPP
Trigger: AGGAGGACAGAGGCCCCCAAGCTGATCTGGTGGTGCATCCACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR CCA 90 bp TGGAGGTGGAGATGGGAGCATCCAAAGTCCCAGGGTGGGGGTGCGTaGATGCACCACCAGATCAGCTTGGGGGCCTCTGTCCTCCTAGCT +
Preference number: 1 (lower is better)
Translates to: WRWRWEHPKSQGGGA*MHHQISLGASVLLA
Trigger: AGCTAGGAGGACAGAGGCCCCCAAGCTGATCTGGTGGTGCATCCACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR CCA 90 bp CCGAAGGATGGCATGCATGGGGTAAAGAGAGTGATTGGCAAGCAGTaGTCTAGAGAGCCAAGAGAGACTGTCAGGGCAGCCCTGGGGTGG +
Preference number: 1 (lower is better)
Translates to: PKDGMHGVKRVIGKQ*SREPRETVRAALGW
Trigger: CCACCCCAGGGCTGCCCTGACAGTCTCTCTTGGCTCTCTAGACCACTGCTTGCCAATCACTCTCTTTACCCCATGCATGCCATCCTTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR CCA 90 bp ACAGGAAAGGCACGAAGCGGCTTTAAAAGTCACTGGAGGTGGAGATaGGAGCATCCAAAGTCCCAGGGTGGGGGTGCGTGGATGCACCAC +
Preference number: 1 (lower is better)
Translates to: TGKARSGFKSHWRWR*EHPKSQGGGAWMHH
Trigger: GTGGTGCATCCACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTGACTTTTAAAGCCGCTTCGTGCCTTTCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR CCA 90 bp GGATCCAACGTTACAGGAAAGGCACGAAGCGGCTTTAAAAGTCACTaGAGGTGGAGATGGGAGCATCCAAAGTCCCAGGGTGGGGGTGCG +
Preference number: 1 (lower is better)
Translates to: GSNVTGKARSGFKSH*RWRWEHPKSQGGGA
Trigger: CGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTGACTTTTAAAGCCGCTTCGTGCCTTTCCTGTAACGTTGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR CCA 90 bp AACGTTACAGGAAAGGCACGAAGCGGCTTTAAAAGTCACTGGAGGTaGAGATGGGAGCATCCAAAGTCCCAGGGTGGGGGTGCGTGGATG +
Preference number: 1 (lower is better)
Translates to: NVTGKARSGFKSHWR*RWEHPKSQGGGAWM
Trigger: CATCCACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTGACTTTTAAAGCCGCTTCGTGCCTTTCCTGTAACGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR TCA 90 bp AGTCTAGGAAGCCGGAGTGCAGGTATCAGGCACAAGGGGAGGGCCTaGGATGAGAGTTTGTGGAAAGCCAGTCTCATGGTGAAGAGAGAA +
Preference number: 1 (lower is better)
Translates to: SLGSRSAGIRHKGRA*DESLWKASLMVKRE
Trigger: TTCTCTCTTCACCATGAGACTGGCTTTCCACAAACTCTCATCTCAGGCCCTCCCCTTGTGCCTGATACCTGCACTCCGGCTTCCTAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR CCA 90 bp GATGGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTaGCAGGGCCAGAGTCTAGGAAGCCGGAGTGCAGGTATCAGGCAC +
Preference number: 1 (lower is better)
Translates to: DGEIVLGAQIESVLV*QGQSLGSRSAGIRH
Trigger: GTGCCTGATACCTGCACTCCGGCTTCCTAGACTCTGGCCCTGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR CCA 90 bp CATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATaGGCTTCCCCAAAGAGCACATCTAAGATGGCAGCTGCAAGCTCT +
Preference number: 1 (lower is better)
Translates to: HSSGGAPPNQCPPVR*ASPKSTSKMAAASS
Trigger: AGAGCTTGCAGCTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR TCA 90 bp GCAGGAAATAAGCTTGAGAAGCAGAAAGGGGTACATGTCAAGGAGTaGGATGGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTG +
Preference number: 1 (lower is better)
Translates to: AGNKLEKQKGVHVKE*DGEIVLGAQIESVL
Trigger: CAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCCATCTCACTCCTTGACATGTACCCCTTTCTGCTTCTCAAGCTTATTTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR TCA 90 bp TCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACTCTACCTaGCCCGTCATCATAACTTACATAAATAGAATTATTACTATTCAT +
Preference number: 1 (lower is better)
Translates to: SLAEMDPLPSPAHST*PVIITYINRIITIH
Trigger: ATGAATAGTAATAATTCTATTTATGTAAGTTATGATGACGGGTCAGGTAGAGTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR CCA 90 bp GTCATCATAACTTACATAAATAGAATTATTACTATTCATTACTCCTaGTACATAGGGGTTAAATATACAGGCCTGGGGGCAGCCTCCCTG +
Preference number: 1 (lower is better)
Translates to: VIITYINRIITIHYS*YIGVKYTGLGAASL
Trigger: CAGGGAGGCTGCCCCCAGGCCTGTATATTTAACCCCTATGTACCAGGAGTAATGAATAGTAATAATTCTATTTATGTAAGTTATGATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR TCA 90 bp AAAGTCACTGGAGGTGGAGATGGGAGCATCCAAAGTCCCAGGGTGGGGGTGCGTCCCCTCCATAGGACTTaGGGTTTCACAGCTTCTGGC +
Preference number: 2 (lower is better)
Translates to: KVTGGGDGSIQSPRVGVRPLHRT*GFTASG
Trigger: GCCAGAAGCTGTGAAACCTCAAGTCCTATGGAGGGG...ACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR GCA 90 bp AAAGTCACTGGAGGTGGAGATGGGAGCATCCAAAGTCCCAGGGTGGGGGTGCGTTGGAGGAACCTGCTCTaGAGTCAAGGGAGATGGGGT +
Preference number: 2 (lower is better)
Translates to: KVTGGGDGSIQSPRVGVRWRNLL*SQGRWG
Trigger: ACCCCATCTCCCTTGACTGCAGAGCAGGTTCCTCCA...ACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CCA 90 bp CCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGGGGAAGACTGAAGCCTaGAGGCTGAGGGACAGCAGG +
Preference number: 2 (lower is better)
Translates to: PTHSSGGAPPNQCPPVRWGKTEA*RLRDSR
Trigger: CCTGCTGTCCCTCAGCCTCCAGGCTTCAGTCTTCCC...CCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CCA 90 bp CTGCAGTCAAGGGAGATGGGGTACATTCCAGTCCTTCTCCCCTCCATAGGACTTTACCCAAGCCCAGAATaGCCAGGAGGGAGACAGAGG +
Preference number: 2 (lower is better)
Translates to: LQSREMGYIPVLLPSIGLYPSPE*PGGRQR
Trigger: CCTCTGTCTCCCTCCTGGCCATTCTGGGCTTGGGTA...AAGTCCTATGGAGGGGAGAAGGACTGGAATGTACCCCATCTCCCTTGACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CCA 90 bp TCCCAGGGTGGGGGTGCGTGGATGCACCACCAGATCAGCTTGGGGGCCTCTGTCGAGAATGGAAAGCAATaGTGTAAGAAGTTGGGAAGA +
Preference number: 2 (lower is better)
Translates to: SQGGGAWMHHQISLGASVENGKQ*CKKLGR
Trigger: TCTTCCCAACTTCTTACACCATTGCTTTCCATTCTC...GACAGAGGCCCCCAAGCTGATCTGGTGGTGCATCCACGCACCCCCACCCTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CCA 90 bp ACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTATGGTGTCTAAGGGGTaGGGCAGTGGAGGAACCTGC +
Preference number: 2 (lower is better)
Translates to: THSSGGAPPNQCPPVRWAMVSKG*GSGGTC
Trigger: GCAGGTTCCTCCACTGCCCCACCCCTTAGACACCAT...AGCCCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CCA 90 bp CACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTATACCCAAGCCCAGAATaGCCAGGAGGGAGACAGAGG +
Preference number: 2 (lower is better)
Translates to: HPQTNVLLLDGLPQRAHLYPSPE*PGGRQR
Trigger: CCTCTGTCTCCCTCCTGGCCATTCTGGGCTTGGGTA...TAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGTTTGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CCA 90 bp CTGCAGTCAAGGGAGATGGGGTACATTCCAGTCCTTCTCCCCTCCATAGGACTTGGGTCACCCCATCTTTaGGATCAGATCCCCACTGGT +
Preference number: 2 (lower is better)
Translates to: LQSREMGYIPVLLPSIGLGSPHL*DQIPTG
Trigger: ACCAGTGGGGATCTGATCCCAAAGATGGGGTGACCC...AAGTCCTATGGAGGGGAGAAGGACTGGAATGTACCCCATCTCCCTTGACTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CCA 90 bp ACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTGAAAGTGTGTTGGTGTaGCAGGGCCAGAGTCTAGGA +
Preference number: 2 (lower is better)
Translates to: THSSGGAPPNQCPPVRWAESVLV*QGQSLG
Trigger: TCCTAGACTCTGGCCCTGCCACACCAACACACTTTC...AGCCCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CCA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGATGGTGTCTAAGGGGTaGGGCAGTGGAGGAACCTGC +
Preference number: 2 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQMVSKG*GSGGTC
Trigger: GCAGGTTCCTCCACTGCCCCACCCCTTAGACACCAT...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR TCA 90 bp TTCCCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGACCAGCTCACTCTACCTaGCCCGTCATCATAACTTAC +
Preference number: 2 (lower is better)
Translates to: FPTHSSGGAPPNQCPPVRPAHST*PVIITY
Trigger: GTAAGTTATGATGACGGGTCAGGTAGAGTGAGCTGG...TCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR GCA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGACCATTCTTCAGGAGGTaGACCCCCAAACCAATGTCC +
Preference number: 2 (lower is better)
Translates to: LETAGDRKGGSNVTGKARPFFRR*TPKPMS
Trigger: GGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGG...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CCA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGGAGAGCCCCGAAGGATaGCATGCATGGGGTAAAGAG +
Preference number: 2 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQESPEG*HAWGKE
Trigger: CTCTTTACCCCATGCATGCCATCCTTCGGGGCTCTC...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR TCA 90 bp AAAGTCACTGGAGGTGGAGATGGGAGCATCCAAAGTCCCAGGGTGGGGGTGCGTAGAAACCCTATCAACTaGGATTCTGATGATAGACAT +
Preference number: 2 (lower is better)
Translates to: KVTGGGDGSIQSPRVGVRRNPIN*DSDDRH
Trigger: ATGTCTATCATCAGAATCTCAGTTGATAGGGTTTCT...ACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CCA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACGAGAGCCCCGAAGGATaGCATGCATGGGGTAAAGAG +
Preference number: 2 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHESPEG*HAWGKE
Trigger: CTCTTTACCCCATGCATGCCATCCTTCGGGGCTCTC...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATGGGAAGACTGAAGCCTaGAGGCTGAGGGACAGCAGG +
Preference number: 2 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDGKTEA*RLRDSR
Trigger: CCTGCTGTCCCTCAGCCTCCAGGCTTCAGTCTTCCC...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CCA 90 bp TTTGAATCTGATCCTAGAGAAAGCCTTCCCCACCCATTCTTCAGGAGGTGCACCTGTCAAGGAGTGAGATaGAGAAATAGTGTTGGGAGC +
Preference number: 2 (lower is better)
Translates to: FESDPRESLPHPFFRRCTCQGVR*RNSVGS
Trigger: GCTCCCAACACTATTTCTCCATCTCACTCCTTGACA...GGTGCACCTCCTGAAGAATGGGTGGGGAAGGCTTTCTCTAGGATCAGATTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR TCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATCCAGCTCACTCTACCTaGCCCGTCATCATAACTTAC +
Preference number: 2 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDPAHST*PVIITY
Trigger: GTAAGTTATGATGACGGGTCAGGTAGAGTGAGCTGG...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR TCA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGAAACCCTATCAACTaGGATTCTGATGATAGACAT +
Preference number: 2 (lower is better)
Translates to: LETAGDRKGGSNVTGKARRNPIN*DSDDRH
Trigger: ATGTCTATCATCAGAATCTCAGTTGATAGGGTTTCT...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATTGTCAAGGAGTGAGATaGAGAAATAGTGTTGGGAGC +
Preference number: 2 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDCQGVR*RNSVGS
Trigger: GCTCCCAACACTATTTCTCCATCTCACTCCTTGACA...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATGAGAATGGAAAGCAATaGTGTAAGAAGTTGGGAAGA +
Preference number: 2 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDENGKQ*CKKLGR
Trigger: TCTTCCCAACTTCTTACACCATTGCTTTCCATTCTC...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR GCA 72 bp GTGGAGATGGGAGCATCCAAAGTCCCAGGGTGGGGGTaGGTGGATGCACCACCAGATCAGCTTGGGGGCCTC +
Preference number: 3 (lower is better)
Translates to: VEMGASKVPGWG*VDAPPDQLGGL
Trigger: GAGGCCCCCAAGCTGATCTGGTGGTGCATCCACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR CCA 72 bp AGATGGGAGCATCCAAAGTCCCAGGGTGGGGGTGCGTaGATGCACCACCAGATCAGCTTGGGGGCCTCTGTC +
Preference number: 3 (lower is better)
Translates to: RWEHPKSQGGGA*MHHQISLGASV
Trigger: GACAGAGGCCCCCAAGCTGATCTGGTGGTGCATCCACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR CCA 72 bp CTGGAGGTGGAGATGGGAGCATCCAAAGTCCCAGGGTaGGGGTGCGTGGATGCACCACCAGATCAGCTTGGG +
Preference number: 3 (lower is better)
Translates to: LEVEMGASKVPG*GCVDAPPDQLG
Trigger: CCCAAGCTGATCTGGTGGTGCATCCACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CAA 90 bp TCCCAGGGTGGGGGTGCGTGGATGCACCACCAGATCAGCTTGGGGGCCTCTGTCCAAATAGAAAGTGTGTaGGTGTGGCAGGGCCAGAGT +
Preference number: 3 (lower is better)
Translates to: SQGGGAWMHHQISLGASVQIESV*VWQGQS
Trigger: ACTCTGGCCCTGCCACACCAACACACTTTCTATTTG...GACAGAGGCCCCCAAGCTGATCTGGTGGTGCATCCACGCACCCCCACCCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CAA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCCACCACCAGATCAGCTaGGGGGCCTCTGTCCTCCTA +
Preference number: 3 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGHHQIS*GASVLL
Trigger: TAGGAGGACAGAGGCCCCCAAGCTGATCTGGTGGTG...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR TCA 72 bp AGCCGGAGTGCAGGTATCAGGCACAAGGGGAGGGCCTaGGATGAGAGTTTGTGGAAAGCCAGTCTCATGGTG +
Preference number: 3 (lower is better)
Translates to: SRSAGIRHKGRA*DESLWKASLMV
Trigger: CACCATGAGACTGGCTTTCCACAAACTCTCATCTCAGGCCCTCCCCTTGTGCCTGATACCTGCACTCCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR CCA 72 bp GGAAAGGCACGAAGCGGCTTTAAAAGTCACTGGAGGTaGAGATGGGAGCATCCAAAGTCCCAGGGTGGGGGT +
Preference number: 3 (lower is better)
Translates to: GKARSGFKSHWR*RWEHPKSQGGG
Trigger: ACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTGACTTTTAAAGCCGCTTCGTGCCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CAA 90 bp AAAGTCACTGGAGGTGGAGATGGGAGCATCCAAAGTCCCAGGGTGGGGGTGCGTCAAATAGAAAGTGTGTaGGTGTGGCAGGGCCAGAGT +
Preference number: 3 (lower is better)
Translates to: KVTGGGDGSIQSPRVGVRQIESV*VWQGQS
Trigger: ACTCTGGCCCTGCCACACCAACACACTTTCTATTTG...ACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR CCA 72 bp GGCATGCATGGGGTAAAGAGAGTGATTGGCAAGCAGTaGTCTAGAGAGCCAAGAGAGACTGTCAGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: GMHGVKRVIGKQ*SREPRETVRAA
Trigger: GGCTGCCCTGACAGTCTCTCTTGGCTCTCTAGACCACTGCTTGCCAATCACTCTCTTTACCCCATGCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR CCA 72 bp GGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATaGGCTTCCCCAAAGAGCACATCTAAGATGGCAGCT +
Preference number: 3 (lower is better)
Translates to: GGAPPNQCPPVR*ASPKSTSKMAA
Trigger: AGCTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CAA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGGATGGAGAAATAGTGTaGGGAGCCCAAATAGAAAGT +
Preference number: 3 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQDGEIV*GAQIES
Trigger: ACTTTCTATTTGGGCTCCCAACACTATTTCTCCATC...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CAA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATCAATGGTGTAAGAAGTaGGGAAGACTGAAGCCTGGA +
Preference number: 3 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDQWCKK*GRLKPG
Trigger: TCCAGGCTTCAGTCTTCCCAACTTCTTACACCATTG...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR-3UTR CAA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATGATGGAGAAATAGTGTaGGGAGCCCAAATAGAAAGT +
Preference number: 3 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDDGEIV*GAQIES
Trigger: ACTTTCTATTTGGGCTCCCAACACTATTTCTCCATC...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR TCA 72 bp GAAATGGATCCACTTCCCTCCCCAGCTCACTCTACCTaGCCCGTCATCATAACTTACATAAATAGAATTATT +
Preference number: 3 (lower is better)
Translates to: EMDPLPSPAHST*PVIITYINRII
Trigger: AATAATTCTATTTATGTAAGTTATGATGACGGGTCAGGTAGAGTGAGCTGGGGAGGGAAGTGGATCCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
3UTR CCA 72 bp ACTTACATAAATAGAATTATTACTATTCATTACTCCTaGTACATAGGGGTTAAATATACAGGCCTGGGGGCA +
Preference number: 3 (lower is better)
Translates to: TYINRIITIHYS*YIGVKYTGLGA
Trigger: TGCCCCCAGGCCTGTATATTTAACCCCTATGTACCAGGAGTAATGAATAGTAATAATTCTATTTATGTAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp TCCCAGGGTGGGGGTGCGTGGATGCACCACCAGATCAGCTTGGGGGCCTCTGTCGGGGGAACCTGGGGCTaGCTGTCCCGAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SQGGGAWMHHQISLGASVGGTWG*LSRVSP
Trigger: AGGAGAGACTCGGGACAGCCAGCCCCAGGTTCCCCC...GACAGAGGCCCCCAAGCTGATCTGGTGGTGCATCCACGCACCCCCACCCTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000536324.4
CDS-3UTR CCA 90 bp GCCGGAGTGCAGGTATCAGGCACAAGGGGAGGGCCTGAGATGAGAGTTTGTGGAGCTCCTTGGGGCCACTaGGAGGGGGACCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AGVQVSGTRGGPEMRVCGAPWGH*EGDPGL
Trigger: CAGGCCCGGGTCCCCCTCCCAGTGGCCCCAAGGAGC...TCCACAAACTCTCATCTCAGGCCCTCCCCTTGTGCCTGATACCTGCACTCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp TCCCAGGGTGGGGGTGCGTGGATGCACCACCAGATCAGCTTGGGGGCCTCTGTCCAGGGTGGGGGTGCGTaGATGCACCACCAGATCAGC +
Preference number: 4 (lower is better)
Translates to: SQGGGAWMHHQISLGASVQGGGA*MHHQIS
Trigger: GCTGATCTGGTGGTGCATCCACGCACCCCCACCCTG...GACAGAGGCCCCCAAGCTGATCTGGTGGTGCATCCACGCACCCCCACCCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp TCCCAGGGTGGGGGTGCGTGGATGCACCACCAGATCAGCTTGGGGGCCTCTGTCAGTGCTTGCACCCCGTaGGGGTTTGGCTCCACCACT +
Preference number: 4 (lower is better)
Translates to: SQGGGAWMHHQISLGASVSACTP*GFGSTT
Trigger: AGTGGTGGAGCCAAACCCCCACGGGGTGCAAGCACT...GACAGAGGCCCCCAAGCTGATCTGGTGGTGCATCCACGCACCCCCACCCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp TCCCAGGGTGGGGGTGCGTGGATGCACCACCAGATCAGCTTGGGGGCCTCTGTCCCTACAGTCCTACTCTaGCTCCAGAGTCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SQGGGAWMHHQISLGASVPTVLL*LQSPCC
Trigger: GCAGCAAGGACTCTGGAGTCAGAGTAGGACTGTAGG...GACAGAGGCCCCCAAGCTGATCTGGTGGTGCATCCACGCACCCCCACCCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536324.4
CDS-3UTR GCA 90 bp GCCGGAGTGCAGGTATCAGGCACAAGGGGAGGGCCTGAGATGAGAGTTTGTGGATGCTGGGGCCCTGGTTaGAAGAGGTGGGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGVQVSGTRGGPEMRVCGCWGPG*KRWGAG
Trigger: CCCAGCTCCCCACCTCTTGCAACCAGGGCCCCAGCA...TCCACAAACTCTCATCTCAGGCCCTCCCCTTGTGCCTGATACCTGCACTCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCCCTCCTCTTCCCCCGTaGTGCGGCCCTCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGPPLPP*CGPPPA
Trigger: AGCTGGGGGAGGGCCGCAGCACGGGGGAAGAGGAGG...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp CTGCAGTCAAGGGAGATGGGGTACATTCCAGTCCTTCTCCCCTCCATAGGACTTGGGAGGACGCCATCCTaGGGCTGGGGAACGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LQSREMGYIPVLLPSIGLGRTPS*GWGTGP
Trigger: GGGACCCGTTCCCCAGCCTCAGGATGGCGTCCTCCC...AAGTCCTATGGAGGGGAGAAGGACTGGAATGTACCCCATCTCCCTTGACTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp TCCCAGGGTGGGGGTGCGTGGATGCACCACCAGATCAGCTTGGGGGCCTCTGTCGTGCATATCCCACCATaGAGTAGGAGTGTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SQGGGAWMHHQISLGASVVHIPP*SRSVAW
Trigger: CCAGGCAACACTCCTACTCCATGGTGGGATATGCAC...GACAGAGGCCCCCAAGCTGATCTGGTGGTGCATCCACGCACCCCCACCCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp AAAGTCACTGGAGGTGGAGATGGGAGCATCCAAAGTCCCAGGGTGGGGGTGCGTGACATGCTGGGGCCCTaGTTGCAAGAGGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: KVTGGGDGSIQSPRVGVRDMLGP*LQEVGS
Trigger: GCTCCCCACCTCTTGCAACCAGGGCCCCAGCATGTC...ACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTGACTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAGGGAGGACGCCATCCTaGGGCTGGGGAACGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LETAGDRKGGSNVTGKARGRTPS*GWGTGP
Trigger: GGGACCCGTTCCCCAGCCTCAGGATGGCGTCCTCCC...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp TTCCCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGAGCCCAGGGTCCTGGGTaGCTGTGGGCCCAGGGAATG +
Preference number: 4 (lower is better)
Translates to: FPTHSSGGAPPNQCPPVRAQGPG*LWAQGM
Trigger: CATTCCCTGGGCCCACAGGCACCCAGGACCCTGGGC...TCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp GCCGGAGTGCAGGTATCAGGCACAAGGGGAGGGCCTGAGATGAGAGTTTGTGGAGGCTTTCTCTGGGGTTaGTGGCGAGGCAGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: AGVQVSGTRGGPEMRVCGGFLWG*WRGRRS
Trigger: CGACCTTCTGCCTCGCCAGCAACCCCAGAGAAAGCC...TCCACAAACTCTCATCTCAGGCCCTCCCCTTGTGCCTGATACCTGCACTCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp AAAGTCACTGGAGGTGGAGATGGGAGCATCCAAAGTCCCAGGGTGGGGGTGCGTGGGCCTGGTTCTCCATaGGTGCGCTGGTGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: KVTGGGDGSIQSPRVGVRGPGSP*VRWCLL
Trigger: GAGCAAACACCAGCGCACCCATGGAGAACCAGGCCC...ACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTGACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CTGCAGTCAAGGGAGATGGGGTACATTCCAGTCCTTCTCCCCTCCATAGGACTTAGGGGGACCCGGGCCTaGTTCTCCATGGGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: LQSREMGYIPVLLPSIGLRGTRA*FSMGAL
Trigger: CAGCGCACCCATGGAGAACCAGGCCCGGGTCCCCCT...AAGTCCTATGGAGGGGAGAAGGACTGGAATGTACCCCATCTCCCTTGACTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGGCTCCTTGGGGCCACTaGGAGGGGGACCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQAPWGH*EGDPGL
Trigger: CAGGCCCGGGTCCCCCTCCCAGTGGCCCCAAGGAGC...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp TTCCCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGAGTCGGGGCGTCTGACTaGCCTCCTCTTCCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: FPTHSSGGAPPNQCPPVRVGASD*PPLPPC
Trigger: GCACGGGGGAAGAGGAGGCCAGTCAGACGCCCCGAC...TCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CTGCAGTCAAGGGAGATGGGGTACATTCCAGTCCTTCTCCCCTCCATAGGACTTAGGGCAGCCCTGGGGTaGGAGACCTTCCACCCGGCT +
Preference number: 4 (lower is better)
Translates to: LQSREMGYIPVLLPSIGLRAALG*ETFHPA
Trigger: AGCCGGGTGGAAGGTCTCCCACCCCAGGGCTGCCCT...AAGTCCTATGGAGGGGAGAAGGACTGGAATGTACCCCATCTCCCTTGACTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp GCCGGAGTGCAGGTATCAGGCACAAGGGGAGGGCCTGAGATGAGAGTTTGTGGAGGGAAGACTGAAGCCTaGAGGCTGAGGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: AGVQVSGTRGGPEMRVCGGKTEA*RLRDSR
Trigger: CCTGCTGTCCCTCAGCCTCCAGGCTTCAGTCTTCCC...TCCACAAACTCTCATCTCAGGCCCTCCCCTTGTGCCTGATACCTGCACTCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp GCCGGAGTGCAGGTATCAGGCACAAGGGGAGGGCCTGAGATGAGAGTTTGTGGATGTGGGCCCAGGGAATaGGTGGGAAAAGGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: AGVQVSGTRGGPEMRVCGCGPRE*VGKGRV
Trigger: TACCCTCCCTTTTCCCACTCATTCCCTGGGCCCACA...TCCACAAACTCTCATCTCAGGCCCTCCCCTTGTGCCTGATACCTGCACTCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp GCCGGAGTGCAGGTATCAGGCACAAGGGGAGGGCCTGAGATGAGAGTTTGTGGAAGCAGAGCAGGCAGGTaGACTTCTTCTCCCGGGTGT +
Preference number: 4 (lower is better)
Translates to: AGVQVSGTRGGPEMRVCGSRAGR*TSSPGC
Trigger: ACACCCGGGAGAAGAAGTTCACCTGCCTGCTCTGCT...TCCACAAACTCTCATCTCAGGCCCTCCCCTTGTGCCTGATACCTGCACTCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp GGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCAGGGCCAGAGGCAACGGGTGGCCTaGGGGTGCTGGGAGGGATCC +
Preference number: 4 (lower is better)
Translates to: GEIVLGAQIESVLVWQGQRQRVA*GCWEGS
Trigger: GGATCCCTCCCAGCACCCTCAGGCCACCCGTTGCCT...CTGGCCCTGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536324.4
CDS-3UTR GCA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAGCCCAGGGTCCTGGGTaGCTGTGGGCCCAGGGAATG +
Preference number: 4 (lower is better)
Translates to: LETAGDRKGGSNVTGKARAQGPG*LWAQGM
Trigger: CATTCCCTGGGCCCACAGGCACCCAGGACCCTGGGC...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp GCCGGAGTGCAGGTATCAGGCACAAGGGGAGGGCCTGAGATGAGAGTTTGTGGACACCACCTAGCCAGTTaGCTCCAGGGTGCATATCCC +
Preference number: 4 (lower is better)
Translates to: AGVQVSGTRGGPEMRVCGHHLAS*LQGAYP
Trigger: GGGATATGCACCCTGGAGGCAACTGGCTAGGTGGTG...TCCACAAACTCTCATCTCAGGCCCTCCCCTTGTGCCTGATACCTGCACTCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCCCATCACCCTGGCCCTaGCCACCACCTAGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGPSPWP*PPPSQL
Trigger: CAACTGGCTAGGTGGTGGGCAGGGCCAGGGTGATGG...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp TTCCCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGCTGGGGCCCTGGTTaGAAGAGGTGGGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPTHSSGGAPPNQCPPVRCWGPG*KRWGAG
Trigger: CCCAGCTCCCCACCTCTTGCAACCAGGGCCCCAGCA...TCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp TTTGAATCTGATCCTAGAGAAAGCCTTCCCCACCCATTCTTCAGGAGGTGCACCCCTCCTCTTCCCCCGTaGTGCGGCCCTCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FESDPRESLPHPFFRRCTPPLPP*CGPPPA
Trigger: AGCTGGGGGAGGGCCGCAGCACGGGGGAAGAGGAGG...GGTGCACCTCCTGAAGAATGGGTGGGGAAGGCTTTCTCTAGGATCAGATTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCAAGGAGCCAGGCAGATaGAGAGAGCTGAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGKEPGR*RELSRG
Trigger: CCCCCGGCTCAGCTCTCTCCATCTGCCTGGCTCCTT...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303846.3
CDS-3UTR CCA 90 bp TCCCAGGGTGGGGGTGCGTGGATGCACCACCAGATCAGCTTGGGGGCCTCTGTCTTTAACCCTTTAACTTaGGGCCTTGAGACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SQGGGAWMHHQISLGASVFNPLT*GLETAG
Trigger: CCCTGCTGTCTCAAGGCCCCAAGTTAAAGGGTTAAA...GACAGAGGCCCCCAAGCTGATCTGGTGGTGCATCCACGCACCCCCACCCTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTAGTGCAGGCAACGGGTaGCCTGAGGGTGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: THSSGGAPPNQCPPVRWASAGNG*PEGAGR
Trigger: CCTCCCAGCACCCTCAGGCCACCCGTTGCCTGCACT...AGCCCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536324.4
CDS-3UTR GCA 90 bp ACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTAGCGCCCTGCCCCACTaGCCCCATATCCACCACTAC +
Preference number: 4 (lower is better)
Translates to: THSSGGAPPNQCPPVRWASALPH*PHIHHY
Trigger: GTAGTGGTGGATATGGGGGCAGTGGGGCAGGGCGCT...AGCCCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp AAAGTCACTGGAGGTGGAGATGGGAGCATCCAAAGTCCCAGGGTGGGGGTGCGTCTGGTTCTCCATGGGTaGGCTGGTGTTTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: KVTGGGDGSIQSPRVGVRLVLHG*AGVCSG
Trigger: ACCTGAGCAAACACCAGCGCACCCATGGAGAACCAG...ACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp GCCGGAGTGCAGGTATCAGGCACAAGGGGAGGGCCTGAGATGAGAGTTTGTGGATGGAGGAACCTGCTCTaGAGTCAAGGGAGATGGGGT +
Preference number: 4 (lower is better)
Translates to: AGVQVSGTRGGPEMRVCGWRNLL*SQGRWG
Trigger: ACCCCATCTCCCTTGACTGCAGAGCAGGTTCCTCCA...TCCACAAACTCTCATCTCAGGCCCTCCCCTTGTGCCTGATACCTGCACTCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCGGGATGTGGCAGCTGTaGATGGGCTTCTTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGGMWQL*MGFFRS
Trigger: GCTGCGGAAGAAGCCCATCCACAGCTGCCACATCCC...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp TTCCCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGACCGCAGCCAGGGATGTaGCAGCTGTGGATGGGCTTC +
Preference number: 4 (lower is better)
Translates to: FPTHSSGGAPPNQCPPVRPQPGM*QLWMGF
Trigger: GAAGCCCATCCACAGCTGCCACATCCCTGGCTGCGG...TCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTCCGCAGCCAGGGATGTaGCAGCTGTGGATGGGCTTC +
Preference number: 4 (lower is better)
Translates to: THSSGGAPPNQCPPVRWAPQPGM*QLWMGF
Trigger: GAAGCCCATCCACAGCTGCCACATCCCTGGCTGCGG...AGCCCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ATTCATTACTCCTGGTACATAGGGGTTAAATATACAGGCCTGGGGGCAGCCTCCAGGGGGACCCGGGCCTaGTTCTCCATGGGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: IHYSWYIGVKYTGLGAASRGTRA*FSMGAL
Trigger: CAGCGCACCCATGGAGAACCAGGCCCGGGTCCCCCT...GGAGGCTGCCCCCAGGCCTGTATATTTAACCCCTATGTACCAGGAGTAATGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CTGCAGTCAAGGGAGATGGGGTACATTCCAGTCCTTCTCCCCTCCATAGGACTTCAGGGTGGGGGTGCGTaGATGCACCACCAGATCAGC +
Preference number: 4 (lower is better)
Translates to: LQSREMGYIPVLLPSIGLQGGGA*MHHQIS
Trigger: GCTGATCTGGTGGTGCATCCACGCACCCCCACCCTG...AAGTCCTATGGAGGGGAGAAGGACTGGAATGTACCCCATCTCCCTTGACTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCTCCAAAGTCCCAGGGTaGGGGTGCGTGGATGCACCA +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGSKVPG*GCVDAP
Trigger: TGGTGCATCCACGCACCCCCACCCTGGGACTTTGGA...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp GCCGGAGTGCAGGTATCAGGCACAAGGGGAGGGCCTGAGATGAGAGTTTGTGGACACTGGAGGTGGAGATaGGAGCATCCAAAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: AGVQVSGTRGGPEMRVCGHWRWR*EHPKSQ
Trigger: CTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTG...TCCACAAACTCTCATCTCAGGCCCTCCCCTTGTGCCTGATACCTGCACTCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGAGCTGGGGGAACCTaGGGCTGGCTGTCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: LETAGDRKGGSNVTGKARRAGGT*GWLSRV
Trigger: GACTCGGGACAGCCAGCCCCAGGTTCCCCCAGCTCT...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536324.4
CDS-3UTR CCA 90 bp TTCCCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGAGCAGATGGAGAGAGCTaGGGGAACCTGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FPTHSSGGAPPNQCPPVRADGES*GNLGLA
Trigger: AGCCAGCCCCAGGTTCCCCCAGCTCTCTCCATCTGC...TCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000536324.4
CDS-3UTR GCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCAAATTTGCTGCACGCTaGCGTCAGCATGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGKFAAR*RQHGQG
Trigger: CCCCTGGCCATGCTGACGGCAGCGTGCAGCAAATTT...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp AAAGTCACTGGAGGTGGAGATGGGAGCATCCAAAGTCCCAGGGTGGGGGTGCGTAAATGCCTGCATGGATaGCTGCCTTGTACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KVTGGGDGSIQSPRVGVRKCLHG*LPCTRS
Trigger: GCTCCTGGTACAAGGCAGGCATCCATGCAGGCATTT...ACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGCACCACCTAGCCAGTTaGCTCCAGGGTGCATATCCC +
Preference number: 4 (lower is better)
Translates to: PTHSSGGAPPNQCPPVRWHHLAS*LQGAYP
Trigger: GGGATATGCACCCTGGAGGCAACTGGCTAGGTGGTG...CCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CTGCAGTCAAGGGAGATGGGGTACATTCCAGTCCTTCTCCCCTCCATAGGACTTGGCTTTCTCTGGGGTTaGTGGCGAGGCAGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: LQSREMGYIPVLLPSIGLGFLWG*WRGRRS
Trigger: CGACCTTCTGCCTCGCCAGCAACCCCAGAGAAAGCC...AAGTCCTATGGAGGGGAGAAGGACTGGAATGTACCCCATCTCCCTTGACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CTGCAGTCAAGGGAGATGGGGTACATTCCAGTCCTTCTCCCCTCCATAGGACTTTCCAGCAAGTTGCTCTaGTCAGGGCTGCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LQSREMGYIPVLLPSIGLSSKLL*SGLPPG
Trigger: CCCTGGAGGCAGCCCTGAGCAGAGCAACTTGCTGGA...AAGTCCTATGGAGGGGAGAAGGACTGGAATGTACCCCATCTCCCTTGACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp GCCGGAGTGCAGGTATCAGGCACAAGGGGAGGGCCTGAGATGAGAGTTTGTGGACCATTCTTCAGGAGGTaGACCCCCAAACCAATGTCC +
Preference number: 4 (lower is better)
Translates to: AGVQVSGTRGGPEMRVCGPFFRR*TPKPMS
Trigger: GGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGG...TCCACAAACTCTCATCTCAGGCCCTCCCCTTGTGCCTGATACCTGCACTCCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTACAGTGGAGGCTGAGCTaGACCTGTGGGCAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: HPQTNVLLLDGLPQRAHLQWRLS*TCGQCP
Trigger: GGGACACTGCCCACAGGTCCAGCTCAGCCTCCACTG...TAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGTTTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CTGCAGTCAAGGGAGATGGGGTACATTCCAGTCCTTCTCCCCTCCATAGGACTTTGGGGCAAGACATGCTaGGGCCCTGGTTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LQSREMGYIPVLLPSIGLWGKTC*GPGCKR
Trigger: CCTCTTGCAACCAGGGCCCCAGCATGTCTTGCCCCA...AAGTCCTATGGAGGGGAGAAGGACTGGAATGTACCCCATCTCCCTTGACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp TTCCCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGACACCCCGTGGGGGTTTaGCTCCACCACTCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: FPTHSSGGAPPNQCPPVRHPVGV*LHHSLL
Trigger: TAGAAGGGAGTGGTGGAGCCAAACCCCCACGGGGTG...TCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CTGCAGTCAAGGGAGATGGGGTACATTCCAGTCCTTCTCCCCTCCATAGGACTTGGGATGTGGCAGCTGTaGATGGGCTTCTTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LQSREMGYIPVLLPSIGLGMWQL*MGFFRS
Trigger: GCTGCGGAAGAAGCCCATCCACAGCTGCCACATCCC...AAGTCCTATGGAGGGGAGAAGGACTGGAATGTACCCCATCTCCCTTGACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp TTCCCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGAAGCAGAGCAGGCAGGTaGACTTCTTCTCCCGGGTGT +
Preference number: 4 (lower is better)
Translates to: FPTHSSGGAPPNQCPPVRSRAGR*TSSPGC
Trigger: ACACCCGGGAGAAGAAGTTCACCTGCCTGCTCTGCT...TCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CTGCAGTCAAGGGAGATGGGGTACATTCCAGTCCTTCTCCCCTCCATAGGACTTCTGGGCCTGGTGAAATaGCTGCATGGATGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LQSREMGYIPVLLPSIGLLGLVK*LHGCLP
Trigger: AGGCAGGCATCCATGCAGGCATTTCACCAGGCCCAG...AAGTCCTATGGAGGGGAGAAGGACTGGAATGTACCCCATCTCCCTTGACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGCCATCACCCTGGCCCTaGCCACCACCTAGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQPSPWP*PPPSQL
Trigger: CAACTGGCTAGGTGGTGGGCAGGGCCAGGGTGATGG...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGCCACTCCCTTCTAGCTaGCCACTATTTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: PTHSSGGAPPNQCPPVRWPLPSS*PLFPTA
Trigger: GGCAGTGGGAAATAGTGGGCAGCTAGAAGGGAGTGG...CCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGAGCGCCCTGCCCCACTaGCCCCATATCCACCACTAC +
Preference number: 4 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQSALPH*PHIHHY
Trigger: GTAGTGGTGGATATGGGGGCAGTGGGGCAGGGCGCT...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp GTGAGATGGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCAGCAGGAGGAGCGCCCTaGCCCACTGCCCCCATATCC +
Preference number: 4 (lower is better)
Translates to: VRWRNSVGSPNRKCVGVAAGGAP*PTAPIS
Trigger: GGATATGGGGGCAGTGGGGCAGGGCGCTCCTCCTGC...TGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCCATCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGAAGTGGGCCTTCAGGTaGGAAGCCTTGCCATACACC +
Preference number: 4 (lower is better)
Translates to: PTHSSGGAPPNQCPPVRWKWAFR*EALPYT
Trigger: GGTGTATGGCAAGGCTTCGCACCTGAAGGCCCACTT...CCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTATCTCCCGGGTGTGAGTaGGCACATGACGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: HPQTNVLLLDGLPQRAHLSPGCE*AHDAPA
Trigger: AGCTGGAGCGTCATGTGCGCACTCACACCCGGGAGA...TAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGTTTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ATTCATTACTCCTGGTACATAGGGGTTAAATATACAGGCCTGGGGGCAGCCTCCGGGTGCGCTGGTGTTTaGTCAGGTGGTCGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: IHYSWYIGVKYTGLGAASGCAGV*SGGRFG
Trigger: CCCGAAGCGACCACCTGAGCAAACACCAGCGCACCC...GGAGGCTGCCCCCAGGCCTGTATATTTAACCCCTATGTACCAGGAGTAATGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCCTGGTTCTCCATGGGTaGGCTGGTGTTTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGLVLHG*AGVCSG
Trigger: ACCTGAGCAAACACCAGCGCACCCATGGAGAACCAG...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCAGATCTCCAGCAAGTTaGTCTGCTCAGGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGRSPAS*SAQGCL
Trigger: GAGGCAGCCCTGAGCAGAGCAACTTGCTGGAGATCT...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGAGATCTCCAGCAAGTTaGTCTGCTCAGGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PTHSSGGAPPNQCPPVRWRSPAS*SAQGCL
Trigger: GAGGCAGCCCTGAGCAGAGCAACTTGCTGGAGATCT...CCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp GGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCAGGGCCAGGTGGGGGTGCGTGGATaGACCACCAGATCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GEIVLGAQIESVLVWQGQVGVRG*TTRSAW
Trigger: CCAAGCTGATCTGGTGGTGCATCCACGCACCCCCAC...CTGGCCCTGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGGTCCCAGGGTGGGGGTaGGTGGATGCACCACCAGAT +
Preference number: 4 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQVPGWG*VDAPPD
Trigger: ATCTGGTGGTGCATCCACGCACCCCCACCCTGGGAC...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCGCATGGCCAGGGGACTaGAGCCATAGTGAACTTCCT +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGAWPGD*SHSELP
Trigger: AGGAAGTTCACTATGGCTCCAGTCCCCTGGCCATGC...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGACGCTGCCGTCAGCATaGCCAGGGGACTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQTLPSA*PGDWSH
Trigger: ATGGCTCCAGTCCCCTGGCCATGCTGACGGCAGCGT...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGACAGCTGGGGGTTCAGTaGAGGCTGAGCTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: LETAGDRKGGSNVTGKARQLGVQ*RLSWTC
Trigger: ACAGGTCCAGCTCAGCCTCCACTGAACCCCCAGCTG...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAGGGAGCAAAGTCAGATaGGTAGGTGGGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LETAGDRKGGSNVTGKARGSKVR*VGGQLG
Trigger: CCCCAGCTGCCCACCTACCCATCTGACTTTGCTCCC...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCAGCTGGGTAGGGGGCTaGATTAAGGGGAGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGSWVGG*IKGSKV
Trigger: GACTTTGCTCCCCTTAATCCAGCCCCCTACCCAGCT...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp GTGAGATGGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCAGTCGGGGCGTCTGACTaGCCTCCTCTTCCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: VRWRNSVGSPNRKCVGVAVGASD*PPLPPC
Trigger: GCACGGGGGAAGAGGAGGCCAGTCAGACGCCCCGAC...TGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCCATCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGATTTCTCTGGGGTTGCTaGCGAGGCAGAAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: LETAGDRKGGSNVTGKARFLWGC*RGRRSG
Trigger: CCCCGACCTTCTGCCTCGCCAGCAACCCCAGAGAAA...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp TTCCCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATTTGCCCAGAGTTGTTaGGTCCCGCAGAGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: FPTHSSGGAPPNQCPPVRFAQSC*VPQRAR
Trigger: TCTAGCCCTCTGCGGGACTCAACAACTCTGGGCAAA...TCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCCACAAGGGGAGGGCCTaGGATGAGAGTTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGHKGRA*DESLWK
Trigger: TTTCCACAAACTCTCATCTCAGGCCCTCCCCTTGTG...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp TCCCAGGGTGGGGGTGCGTGGATGCACCACCAGATCAGCTTGGGGGCCTCTGTCAGAAACCCTATCAACTaGGATTCTGATGATAGACAT +
Preference number: 4 (lower is better)
Translates to: SQGGGAWMHHQISLGASVRNPIN*DSDDRH
Trigger: ATGTCTATCATCAGAATCTCAGTTGATAGGGTTTCT...GACAGAGGCCCCCAAGCTGATCTGGTGGTGCATCCACGCACCCCCACCCTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGCAGTTGCCTCCAGGGTaGATATCCCACCATGGAGTA +
Preference number: 4 (lower is better)
Translates to: PTHSSGGAPPNQCPPVRWQLPPG*ISHHGV
Trigger: TACTCCATGGTGGGATATGCACCCTGGAGGCAACTG...CCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp GGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCAGGGCCAGTCTTGGGGCAAGACATaGTGGGGCCCTGGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: GEIVLGAQIESVLVWQGQSWGKT*WGPGCK
Trigger: CTTGCAACCAGGGCCCCAGCATGTCTTGCCCCAAGA...CTGGCCCTGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ATGCATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTGCAGGAGGAGCGCCCTaGCCCACTGCCCCCATATCC +
Preference number: 4 (lower is better)
Translates to: MHLTRISLAEMDPLPSPAAGGAP*PTAPIS
Trigger: GGATATGGGGGCAGTGGGGCAGGGCGCTCCTCCTGC...AGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp TTTGAATCTGATCCTAGAGAAAGCCTTCCCCACCCATTCTTCAGGAGGTGCACCTCCAGCAAGTTGCTCTaGTCAGGGCTGCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FESDPRESLPHPFFRRCTSSKLL*SGLPPG
Trigger: CCCTGGAGGCAGCCCTGAGCAGAGCAACTTGCTGGA...GGTGCACCTCCTGAAGAATGGGTGGGGAAGGCTTTCTCTAGGATCAGATTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCCCATTCTTCAGGAGGTaGACCCCCAAACCAATGTCC +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGPFFRR*TPKPMS
Trigger: GGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGG...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCCATCCCCCATGGTTTTaGAGGCTGAAAGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGHPPWF*RLKGHC
Trigger: GCAGTGACCTTTCAGCCTCCAAAACCATGGGGGATG...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCGTGCATATCCCACCATaGAGTAGGAGTGTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGVHIPP*SRSVAW
Trigger: CCAGGCAACACTCCTACTCCATGGTGGGATATGCAC...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp TTCCCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGAAGCTGGGTAGGGGGCTaGATTAAGGGGAGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: FPTHSSGGAPPNQCPPVRSWVGG*IKGSKV
Trigger: GACTTTGCTCCCCTTAATCCAGCCCCCTACCCAGCT...TCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGCACCCCGTGGGGGTTTaGCTCCACCACTCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQHPVGV*LHHSLL
Trigger: TAGAAGGGAGTGGTGGAGCCAAACCCCCACGGGGTG...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ATTCATTACTCCTGGTACATAGGGGTTAAATATACAGGCCTGGGGGCAGCCTCCGGGCCTGGTTCTCCATaGGTGCGCTGGTGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: IHYSWYIGVKYTGLGAASGPGSP*VRWCLL
Trigger: GAGCAAACACCAGCGCACCCATGGAGAACCAGGCCC...GGAGGCTGCCCCCAGGCCTGTATATTTAACCCCTATGTACCAGGAGTAATGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ATGCATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTAGGGCAGCCCTGGGGTaGGAGACCTTCCACCCGGCT +
Preference number: 4 (lower is better)
Translates to: MHLTRISLAEMDPLPSPARAALG*ETFHPA
Trigger: AGCCGGGTGGAAGGTCTCCCACCCCAGGGCTGCCCT...AGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGGAAAGTGTGTTGGTGTaGCAGGGCCAGAGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: PTHSSGGAPPNQCPPVRWESVLV*QGQSLG
Trigger: TCCTAGACTCTGGCCCTGCCACACCAACACACTTTC...CCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp TTTGAATCTGATCCTAGAGAAAGCCTTCCCCACCCATTCTTCAGGAGGTGCACCGGGAAGACTGAAGCCTaGAGGCTGAGGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: FESDPRESLPHPFFRRCTGKTEA*RLRDSR
Trigger: CCTGCTGTCCCTCAGCCTCCAGGCTTCAGTCTTCCC...GGTGCACCTCCTGAAGAATGGGTGGGGAAGGCTTTCTCTAGGATCAGATTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp TTCCCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGAGGGTCACCCCATCTTTaGGATCAGATCCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: FPTHSSGGAPPNQCPPVRGSPHL*DQIPTG
Trigger: ACCAGTGGGGATCTGATCCCAAAGATGGGGTGACCC...TCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTACGAGTCTCTCCTCTCTaGAGGTCTGGCAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: HPQTNVLLLDGLPQRAHLRVSPL*RSGRES
Trigger: ACTCTCCCTGCCAGACCTCCAGAGAGGAGAGACTCG...TAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGTTTGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536324.4
CDS-3UTR TCA 90 bp ACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTATCATTAGCATAGCCTaGGGTGGGTGCTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: THSSGGAPPNQCPPVRWAIISIA*GGCWRT
Trigger: AGTCCTCCAGCACCCACCTCAGGCTATGCTAATGAT...AGCCCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACGGGTTCAGTGGAGGCTaGGCTGGACCTGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHGFSGG*AGPVGS
Trigger: ACTGCCCACAGGTCCAGCTCAGCCTCCACTGAACCC...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAGCTCATCCGAACGAGTaGACCTCTTGCCGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LETAGDRKGGSNVTGKARAHPNE*TSCRRR
Trigger: TCTTCTGCGGCAAGAGGTTCACTCGTTCGGATGAGC...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp CCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGCCAGCTCACTCTACCTaGCCCGTCATCATAACTTAC +
Preference number: 4 (lower is better)
Translates to: PTHSSGGAPPNQCPPVRWPAHST*PVIITY
Trigger: GTAAGTTATGATGACGGGTCAGGTAGAGTGAGCTGG...CCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp CACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTACCCCTCCATAGGACTTaGGGTTTCACAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: HPQTNVLLLDGLPQRAHLPLHRT*GFTASG
Trigger: GCCAGAAGCTGTGAAACCTCAAGTCCTATGGAGGGG...TAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGTTTGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCAGTACGGCTTCTTTGTaGCTGCTTTGCCCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGSTASL*LLCPEL
Trigger: CAACTCTGGGCAAAGCAGGCACAAAGAAGCCGTACT...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGTCTTGGGGCAAGACATaGTGGGGCCCTGGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQSWGKT*WGPGCK
Trigger: CTTGCAACCAGGGCCCCAGCATGTCTTGCCCCAAGA...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp TTCCCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGACATCCCCCATGGTTTTaGAGGCTGAAAGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: FPTHSSGGAPPNQCPPVRHPPWF*RLKGHC
Trigger: GCAGTGACCTTTCAGCCTCCAAAACCATGGGGGATG...TCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ATTCATTACTCCTGGTACATAGGGGTTAAATATACAGGCCTGGGGGCAGCCTCCTCTCCATGGGTGCGCTaGTGTTTGCTCAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: IHYSWYIGVKYTGLGAASSPWVR*CLLRWS
Trigger: CGACCACCTGAGCAAACACCAGCGCACCCATGGAGA...GGAGGCTGCCCCCAGGCCTGTATATTTAACCCCTATGTACCAGGAGTAATGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAGAGAGCCCCGAAGGATaGCATGCATGGGGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: LETAGDRKGGSNVTGKARESPEG*HAWGKE
Trigger: CTCTTTACCCCATGCATGCCATCCTTCGGGGCTCTC...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGTACCCAAGCCCAGAATaGCCAGGAGGGAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQYPSPE*PGGRQR
Trigger: CCTCTGTCTCCCTCCTGGCCATTCTGGGCTTGGGTA...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp AAAGTCACTGGAGGTGGAGATGGGAGCATCCAAAGTCCCAGGGTGGGGGTGCGTTGTCAAGGAGTGAGATaGAGAAATAGTGTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KVTGGGDGSIQSPRVGVRCQGVR*RNSVGS
Trigger: GCTCCCAACACTATTTCTCCATCTCACTCCTTGACA...ACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTGACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ATTCATTACTCCTGGTACATAGGGGTTAAATATACAGGCCTGGGGGCAGCCTCCATGGTGTCTAAGGGGTaGGGCAGTGGAGGAACCTGC +
Preference number: 4 (lower is better)
Translates to: IHYSWYIGVKYTGLGAASMVSKG*GSGGTC
Trigger: GCAGGTTCCTCCACTGCCCCACCCCTTAGACACCAT...GGAGGCTGCCCCCAGGCCTGTATATTTAACCCCTATGTACCAGGAGTAATGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp GGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCAGGGCCAGCACTGGAGGTGGAGATaGGAGCATCCAAAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GEIVLGAQIESVLVWQGQHWRWR*EHPKSQ
Trigger: CTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTG...CTGGCCCTGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ATTCATTACTCCTGGTACATAGGGGTTAAATATACAGGCCTGGGGGCAGCCTCCTCCTCTCTGGAGGTCTaGCAGGGAGAGTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: IHYSWYIGVKYTGLGAASSSLEV*QGECRQ
Trigger: TTGCCTGCACTCTCCCTGCCAGACCTCCAGAGAGGA...GGAGGCTGCCCCCAGGCCTGTATATTTAACCCCTATGTACCAGGAGTAATGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536324.4
3UTR CAA 72 bp GGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTaGGTGTGGCAGGGCCAGAGTCTAGGAAGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: GEIVLGAQIESV*VWQGQSLGSRS
Trigger: ACTCCGGCTTCCTAGACTCTGGCCCTGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp TTTGAATCTGATCCTAGAGAAAGCCTTCCCCACCCATTCTTCAGGAGGTGCACCTTTGCCCAGAGTTGTTaGGTCCCGCAGAGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: FESDPRESLPHPFFRRCTFAQSC*VPQRAR
Trigger: TCTAGCCCTCTGCGGGACTCAACAACTCTGGGCAAA...GGTGCACCTCCTGAAGAATGGGTGGGGAAGGCTTTCTCTAGGATCAGATTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCACTCCACAAAGGGCATaGTCCCTTCCATTCCACAAT +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGTPQRA*SLPFHN
Trigger: ATTGTGGAATGGAAGGGATCATGCCCTTTGTGGAGT...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGGCTGAAAGGTCACTaGCCACAGAGTACGGCTTCT +
Preference number: 4 (lower is better)
Translates to: HPQTNVLLLDGLPQRAHLRLKGH*PQSTAS
Trigger: AGAAGCCGTACTCTGTGGGCAGTGACCTTTCAGCCT...TAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGTTTGGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAAATGCCTGCATGGATaGCTGCCTTGTACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LETAGDRKGGSNVTGKARKCLHG*LPCTRS
Trigger: GCTCCTGGTACAAGGCAGGCATCCATGCAGGCATTT...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ATGCATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTGGGTGCGCTGGTGTTTaGTCAGGTGGTCGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: MHLTRISLAEMDPLPSPAGCAGV*SGGRFG
Trigger: CCCGAAGCGACCACCTGAGCAAACACCAGCGCACCC...AGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACGTGGGGGTGCGTGGATaGACCACCAGATCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHVGVRG*TTRSAW
Trigger: CCAAGCTGATCTGGTGGTGCATCCACGCACCCCCAC...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAGGTGAAATGCCTGCATaGATGCCTGCCTTGTACCAG +
Preference number: 4 (lower is better)
Translates to: HPQTNVLLLDGLPQRAHLGEMPA*MPALYQ
Trigger: CTGGTACAAGGCAGGCATCCATGCAGGCATTTCACC...TAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGTTTGGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACGGGAGCAAAGTCAGATaGGTAGGTGGGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHGSKVR*VGGQLG
Trigger: CCCCAGCTGCCCACCTACCCATCTGACTTTGCTCCC...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ATGCATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTGACATGCTGGGGCCCTaGTTGCAAGAGGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: MHLTRISLAEMDPLPSPADMLGP*LQEVGS
Trigger: GCTCCCCACCTCTTGCAACCAGGGCCCCAGCATGTC...AGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACTGGGGCAAGACATGCTaGGGCCCTGGTTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHWGKTC*GPGCKR
Trigger: CCTCTTGCAACCAGGGCCCCAGCATGTCTTGCCCCA...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp AAAGTCACTGGAGGTGGAGATGGGAGCATCCAAAGTCCCAGGGTGGGGGTGCGTTATTTCCCACTGCCTTaGGTTTATAGACATCTTGGG +
Preference number: 4 (lower is better)
Translates to: KVTGGGDGSIQSPRVGVRYFPLP*VYRHLG
Trigger: CCCAAGATGTCTATAAACCCAAGGCAGTGGGAAATA...ACGCACCCCCACCCTGGGACTTTGGATGCTCCCATCTCCACCTCCAGTGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp GTGAGATGGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCAAGTGCTTGCACCCCGTaGGGGTTTGGCTCCACCACT +
Preference number: 4 (lower is better)
Translates to: VRWRNSVGSPNRKCVGVASACTP*GFGSTT
Trigger: AGTGGTGGAGCCAAACCCCCACGGGGTGCAAGCACT...TGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCCATCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACTCCAGGGGCTTTCTCTaGGGTTGCTGGCGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHSRGFL*GCWRGR
Trigger: TCTGCCTCGCCAGCAACCCCAGAGAAAGCCCCTGGA...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp GTGAGATGGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCATCCAGGGGCTTTCTCTaGGGTTGCTGGCGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VRWRNSVGSPNRKCVGVASRGFL*GCWRGR
Trigger: TCTGCCTCGCCAGCAACCCCAGAGAAAGCCCCTGGA...TGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCCATCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp TTTGAATCTGATCCTAGAGAAAGCCTTCCCCACCCATTCTTCAGGAGGTGCACCGGGTCACCCCATCTTTaGGATCAGATCCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: FESDPRESLPHPFFRRCTGSPHL*DQIPTG
Trigger: ACCAGTGGGGATCTGATCCCAAAGATGGGGTGACCC...GGTGCACCTCCTGAAGAATGGGTGGGGAAGGCTTTCTCTAGGATCAGATTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CTGCAGTCAAGGGAGATGGGGTACATTCCAGTCCTTCTCCCCTCCATAGGACTTTGCAGTCAAGGGAGATaGGGTACATTCCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LQSREMGYIPVLLPSIGLCSQGR*GTFQSF
Trigger: GAAGGACTGGAATGTACCCCATCTCCCTTGACTGCA...AAGTCCTATGGAGGGGAGAAGGACTGGAATGTACCCCATCTCCCTTGACTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGGGCTTTAAAAGTCACTaGAGGTGGAGATGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: PTHSSGGAPPNQCPPVRWGFKSH*RWRWEH
Trigger: ATGCTCCCATCTCCACCTCCAGTGACTTTTAAAGCC...CCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGCACAAGGGGAGGGCCTaGGATGAGAGTTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQHKGRA*DESLWK
Trigger: TTTCCACAAACTCTCATCTCAGGCCCTCCCCTTGTG...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGTACGGCTTCTTTGTaGCTGCTTTGCCCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LETAGDRKGGSNVTGKARSTASL*LLCPEL
Trigger: CAACTCTGGGCAAAGCAGGCACAAAGAAGCCGTACT...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACCTGGGCCTGGTGAAATaGCTGCATGGATGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHLGLVK*LHGCLP
Trigger: AGGCAGGCATCCATGCAGGCATTTCACCAGGCCCAG...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ATGCATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTTCTCCCGGGTGTGAGTaGGCACATGACGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: MHLTRISLAEMDPLPSPASPGCE*AHDAPA
Trigger: AGCTGGAGCGTCATGTGCGCACTCACACCCGGGAGA...AGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ATGCATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTTGCTCTGCTCAGGGCTaGCTCCAGGGGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: MHLTRISLAEMDPLPSPACSAQG*LQGLSL
Trigger: CAGAGAAAGCCCCTGGAGGCAGCCCTGAGCAGAGCA...AGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATGTCCCAGGGTGGGGGTaGGTGGATGCACCACCAGAT +
Preference number: 4 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDVPGWG*VDAPPD
Trigger: ATCTGGTGGTGCATCCACGCACCCCCACCCTGGGAC...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATACGCTGCCGTCAGCATaGCCAGGGGACTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDTLPSA*PGDWSH
Trigger: ATGGCTCCAGTCCCCTGGCCATGCTGACGGCAGCGT...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ATTCATTACTCCTGGTACATAGGGGTTAAATATACAGGCCTGGGGGCAGCCTCCGCTTGTAAAGGGGGCTaGATAAGCATCCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: IHYSWYIGVKYTGLGAASACKGG*ISIPHG
Trigger: ACCATGGGGGATGCTTATCCAGCCCCCTTTACAAGC...GGAGGCTGCCCCCAGGCCTGTATATTTAACCCCTATGTACCAGGAGTAATGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATCAGTGGAGGCTGAGCTaGACCTGTGGGCAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDQWRLS*TCGQCP
Trigger: GGGACACTGCCCACAGGTCCAGCTCAGCCTCCACTG...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ATGCATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCAGCTGGGGGTTCAGTaGAGGCTGAGCTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: MHLTRISLAEMDPLPSPAQLGVQ*RLSWTC
Trigger: ACAGGTCCAGCTCAGCCTCCACTGAACCCCCAGCTG...AGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ATTCATTACTCCTGGTACATAGGGGTTAAATATACAGGCCTGGGGGCAGCCTCCGAAAGTGTGTTGGTGTaGCAGGGCCAGAGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: IHYSWYIGVKYTGLGAASESVLV*QGQSLG
Trigger: TCCTAGACTCTGGCCCTGCCACACCAACACACTTTC...GGAGGCTGCCCCCAGGCCTGTATATTTAACCCCTATGTACCAGGAGTAATGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ATGCATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTTCCAAAGTCCCAGGGTaGGGGTGCGTGGATGCACCA +
Preference number: 4 (lower is better)
Translates to: MHLTRISLAEMDPLPSPASKVPG*GCVDAP
Trigger: TGGTGCATCCACGCACCCCCACCCTGGGACTTTGGA...AGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CTGCAGTCAAGGGAGATGGGGTACATTCCAGTCCTTCTCCCCTCCATAGGACTTGGCTTTAAAAGTCACTaGAGGTGGAGATGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: LQSREMGYIPVLLPSIGLGFKSH*RWRWEH
Trigger: ATGCTCCCATCTCCACCTCCAGTGACTTTTAAAGCC...AAGTCCTATGGAGGGGAGAAGGACTGGAATGTACCCCATCTCCCTTGACTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACAGGACTGCCTGCAGGTaGAAGGAGCCCATTAGTGCT +
Preference number: 4 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHRTACR*KEPISA
Trigger: AGCACTAATGGGCTCCTTTCACCTGCAGGCAGTCCT...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGTTTAACTTGGGGCCTTaGGACAGCAGGGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQFNLGP*DSRGQK
Trigger: TTTCTGTCCCCTGCTGTCTCAAGGCCCCAAGTTAAA...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACAGCCACCAAATTTGCTaGACGCTGCCGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHSHQIC*TLPSAW
Trigger: CCATGCTGACGGCAGCGTGCAGCAAATTTGGTGGCT...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGTCTTTGTGCCTGCTTTaGCCAGAGTTGTTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQSLCLL*PELLSP
Trigger: GGGACTCAACAACTCTGGGCAAAGCAGGCACAAAGA...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp GTGAGATGGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCACAGTCAGAAGAGCTGTaGCCCTTGGGCACTAGTAGC +
Preference number: 4 (lower is better)
Translates to: VRWRNSVGSPNRKCVGVAQSEEL*PLGTSS
Trigger: GCTACTAGTGCCCAAGGGGCACAGCTCTTCTGACTG...TGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCCATCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACCAGTCAGAAGAGCTGTaGCCCTTGGGCACTAGTAGC +
Preference number: 4 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHQSEEL*PLGTSS
Trigger: GCTACTAGTGCCCAAGGGGCACAGCTCTTCTGACTG...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTCCCACTATTTCCCACTaGCTTGGGTTTATAGACATC +
Preference number: 4 (lower is better)
Translates to: THSSGGAPPNQCPPVRWAPTISH*LGFIDI
Trigger: GATGTCTATAAACCCAAGGCAGTGGGAAATAGTGGG...AGCCCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp GTGAGATGGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCAAAGTGGGCCTTCAGGTaGGAAGCCTTGCCATACACC +
Preference number: 4 (lower is better)
Translates to: VRWRNSVGSPNRKCVGVAKWAFR*EALPYT
Trigger: GGTGTATGGCAAGGCTTCGCACCTGAAGGCCCACTT...TGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCCATCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATTGCTCTGCTCAGGGCTaGCTCCAGGGGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDCSAQG*LQGLSL
Trigger: CAGAGAAAGCCCCTGGAGGCAGCCCTGAGCAGAGCA...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACGCATGGCCAGGGGACTaGAGCCATAGTGAACTTCCT +
Preference number: 4 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHAWPGD*SHSELP
Trigger: AGGAAGTTCACTATGGCTCCAGTCCCCTGGCCATGC...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ATGCATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTTCTCCATGGGTGCGCTaGTGTTTGCTCAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: MHLTRISLAEMDPLPSPASPWVR*CLLRWS
Trigger: CGACCACCTGAGCAAACACCAGCGCACCCATGGAGA...AGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATTTTCTCTGGGGTTGCTaGCGAGGCAGAAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDFLWGC*RGRRSG
Trigger: CCCCGACCTTCTGCCTCGCCAGCAACCCCAGAGAAA...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp GTGAGATGGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCAGAGAGCCCCGAAGGATaGCATGCATGGGGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: VRWRNSVGSPNRKCVGVAESPEG*HAWGKE
Trigger: CTCTTTACCCCATGCATGCCATCCTTCGGGGCTCTC...TGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCCATCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ATGCATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTATGGTGTCTAAGGGGTaGGGCAGTGGAGGAACCTGC +
Preference number: 4 (lower is better)
Translates to: MHLTRISLAEMDPLPSPAMVSKG*GSGGTC
Trigger: GCAGGTTCCTCCACTGCCCCACCCCTTAGACACCAT...AGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGATTTAACCCTTTAACTTaGGGCCTTGAGACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LETAGDRKGGSNVTGKARFNPLT*GLETAG
Trigger: CCCTGCTGTCTCAAGGCCCCAAGTTAAAGGGTTAAA...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATTGTGGGCCCAGGGAATaGGTGGGAAAAGGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDCGPRE*VGKGRV
Trigger: TACCCTCCCTTTTCCCACTCATTCCCTGGGCCCACA...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp ATGCATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCCCCTCCATAGGACTTaGGGTTTCACAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: MHLTRISLAEMDPLPSPAPLHRT*GFTASG
Trigger: GCCAGAAGCTGTGAAACCTCAAGTCCTATGGAGGGG...AGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp ATGCATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTAGCCACCAAATTTGCTaGACGCTGCCGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: MHLTRISLAEMDPLPSPASHQIC*TLPSAW
Trigger: CCATGCTGACGGCAGCGTGCAGCAAATTTGGTGGCT...AGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACCAGTTGCCTCCAGGGTaGATATCCCACCATGGAGTA +
Preference number: 4 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHQLPPG*ISHHGV
Trigger: TACTCCATGGTGGGATATGCACCCTGGAGGCAACTG...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp GTGAGATGGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCAGGTGAAATGCCTGCATaGATGCCTGCCTTGTACCAG +
Preference number: 4 (lower is better)
Translates to: VRWRNSVGSPNRKCVGVAGEMPA*MPALYQ
Trigger: CTGGTACAAGGCAGGCATCCATGCAGGCATTTCACC...TGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCCATCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCGAGAATGGAAAGCAATaGTGTAAGAAGTTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGENGKQ*CKKLGR
Trigger: TCTTCCCAACTTCTTACACCATTGCTTTCCATTCTC...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGAGAGCACATCTAAGATaGCAGCTGCAAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQRAHLR*QLQALH
Trigger: ATGGAGAGCTTGCAGCTGCCATCTTAGATGTGCTCT...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACCCAGCTCACTCTACCTaGCCCGTCATCATAACTTAC +
Preference number: 4 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHPAHST*PVIITY
Trigger: GTAAGTTATGATGACGGGTCAGGTAGAGTGAGCTGG...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp GTGAGATGGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCATCTTTGTGCCTGCTTTaGCCAGAGTTGTTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: VRWRNSVGSPNRKCVGVASLCLL*PELLSP
Trigger: GGGACTCAACAACTCTGGGCAAAGCAGGCACAAAGA...TGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCCATCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATCCACTCCCTTCTAGCTaGCCACTATTTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDPLPSS*PLFPTA
Trigger: GGCAGTGGGAAATAGTGGGCAGCTAGAAGGGAGTGG...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATTGGAGGAACCTGCTCTaGAGTCAAGGGAGATGGGGT +
Preference number: 4 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDWRNLL*SQGRWG
Trigger: ACCCCATCTCCCTTGACTGCAGAGCAGGTTCCTCCA...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp ATGCATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTGCTTGTAAAGGGGGCTaGATAAGCATCCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: MHLTRISLAEMDPLPSPAACKGG*ISIPHG
Trigger: ACCATGGGGGATGCTTATCCAGCCCCCTTTACAAGC...AGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACTGCAGTCAAGGGAGATaGGGTACATTCCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHCSQGR*GTFQSF
Trigger: GAAGGACTGGAATGTACCCCATCTCCCTTGACTGCA...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATATCATTAGCATAGCCTaGGGTGGGTGCTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDIISIA*GGCWRT
Trigger: AGTCCTCCAGCACCCACCTCAGGCTATGCTAATGAT...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATAGGCTGAAAGGTCACTaGCCACAGAGTACGGCTTCT +
Preference number: 4 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDRLKGH*PQSTAS
Trigger: AGAAGCCGTACTCTGTGGGCAGTGACCTTTCAGCCT...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACAGAGCACATCTAAGATaGCAGCTGCAAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHRAHLR*QLQALH
Trigger: ATGGAGAGCTTGCAGCTGCCATCTTAGATGTGCTCT...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATTTTAACTTGGGGCCTTaGGACAGCAGGGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDFNLGP*DSRGQK
Trigger: TTTCTGTCCCCTGCTGTCTCAAGGCCCCAAGTTAAA...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp ATGCATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTACTCCACAAAGGGCATaGTCCCTTCCATTCCACAAT +
Preference number: 4 (lower is better)
Translates to: MHLTRISLAEMDPLPSPATPQRA*SLPFHN
Trigger: ATTGTGGAATGGAAGGGATCATGCCCTTTGTGGAGT...AGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp GTGAGATGGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCATGTCAAGGAGTGAGATaGAGAAATAGTGTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VRWRNSVGSPNRKCVGVACQGVR*RNSVGS
Trigger: GCTCCCAACACTATTTCTCCATCTCACTCCTTGACA...TGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCCATCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR GCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATCCCACTATTTCCCACTaGCTTGGGTTTATAGACATC +
Preference number: 4 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDPTISH*LGFIDI
Trigger: GATGTCTATAAACCCAAGGCAGTGGGAAATAGTGGG...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR TCA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACAGAAACCCTATCAACTaGGATTCTGATGATAGACAT +
Preference number: 4 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHRNPIN*DSDDRH
Trigger: ATGTCTATCATCAGAATCTCAGTTGATAGGGTTTCT...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CCA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATTATTTCCCACTGCCTTaGGTTTATAGACATCTTGGG +
Preference number: 4 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDYFPLP*VYRHLG
Trigger: CCCAAGATGTCTATAAACCCAAGGCAGTGGGAAATA...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS GCA 90 bp GCTGGACCTGTGGGCAGTGTCCCTTGCAGCCCATCACCCTGGCCCTaGCCACCACCTAGCCAGTTGCCTCCAGGGTGCATATCCCACCAT +
Preference number: 5 (lower is better)
Translates to: AGPVGSVPCSPSPWP*PPPSQLPPGCISHH
Trigger: ATGGTGGGATATGCACCCTGGAGGCAACTGGCTAGGTGGTGGGCAGGGCCAGGGTGATGGGCTGCAAGGGACACTGCCCACAGGTCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
ENST00000547755.1
CDS GCA 90 bp GGGTGGGAGACCTTCCACCCGGCTCAGATCTCCAGCAAGTTGCTCTaGTCAGGGCTGCCTCCAGGGGCTTTCTCTGGGGTTGCTGGCGAG +
Preference number: 5 (lower is better)
Translates to: GWETFHPAQISSKLL*SGLPPGAFSGVAGE
Trigger: CTCGCCAGCAACCCCAGAGAAAGCCCCTGGAGGCAGCCCTGAGCAGAGCAACTTGCTGGAGATCTGAGCCGGGTGGAAGGTCTCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS GCA 90 bp CCAAGCTTCTTCCTCCGGATCTTGCAGTGCCCGAGGTCCCGACGGTaGCAACATCCCGTTGGCCCCCAGCCTGCCAGTCTCTCATGCCCT +
Preference number: 5 (lower is better)
Translates to: PSFFLRILQCPRSRR*QHPVGPQPASLSCP
Trigger: AGGGCATGAGAGACTGGCAGGCTGGGGGCCAACGGGATGTTGGCACCGTCGGGACCTCGGGCACTGCAAGATCCGGAGGAAGAAGCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547755.1
CDS CCA 90 bp CCGGATCTTGCAGTGCCCGAGGTCCCGACGGTGCCAACATCCCGTTaGCCCCCAGCCTGCCAGTCTCTCATGCCCTTTCTCTTCCCCATC +
Preference number: 5 (lower is better)
Translates to: PDLAVPEVPTVPTSR*PPACQSLMPFLFPI
Trigger: GATGGGGAAGAGAAAGGGCATGAGAGACTGGCAGGCTGGGGGCCAACGGGATGTTGGCACCGTCGGGACCTCGGGCACTGCAAGATCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547755.1
CDS GCA 90 bp GCTTTCTCGAGGCTGCATCCAAGCTTCTTCCTCCGGATCTTGCAGTaGCCGAGGTCCCGACGGTGCCAACATCCCGTTGGCCCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: AFSRLHPSFFLRILQ*PRSRRCQHPVGPQP
Trigger: AGGCTGGGGGCCAACGGGATGTTGGCACCGTCGGGACCTCGGGCACTGCAAGATCCGGAGGAAGAAGCTTGGATGCAGCCTCGAGAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547755.1
CDS GCA 90 bp CCATCACCCTGGCCCTGCCCACCACCTAGCCAGTTGCCTCCAGGGTaGATATCCCACCATGGAGTAGGAGTGTTGCCTGGGCCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: PSPWPCPPPSQLPPG*ISHHGVGVLPGPGE
Trigger: TTCACCAGGCCCAGGCAACACTCCTACTCCATGGTGGGATATGCACCCTGGAGGCAACTGGCTAGGTGGTGGGCAGGGCCAGGGTGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
ENST00000547755.1
CDS CCA 90 bp AAGGGGAGCAAAGTCAGATGGGTAGGTGGGCAGCTGGGGGTTCAGTaGAGGCTGAGCTGGACCTGTGGGCAGTGTCCCTTGCAGCCCATC +
Preference number: 5 (lower is better)
Translates to: KGSKVRWVGGQLGVQ*RLSWTCGQCPLQPI
Trigger: GATGGGCTGCAAGGGACACTGCCCACAGGTCCAGCTCAGCCTCCACTGAACCCCCAGCTGCCCACCTACCCATCTGACTTTGCTCCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
ENST00000547755.1
CDS-3UTR CAA 90 bp GCCGGAGTGCAGGTATCAGGCACAAGGGGAGGGCCTGAGATGAGAGTTTGTGGATGTGGGCAGTGTCCCTaGCAGCCCATCACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: AGVQVSGTRGGPEMRVCGCGQCP*QPITLA
Trigger: GGCCAGGGTGATGGGCTGCAAGGGACACTGCCCACA...TCCACAAACTCTCATCTCAGGCCCTCCCCTTGTGCCTGATACCTGCACTCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS TCA 90 bp GCTCCACTCCTGTTCCACTCAGGCTCCGGTCCTACAGTCCTACTCTaGCTCCAGAGTCCTTGCTGCTGCTCGGCGGCTGCTGCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: APLLFHSGSGPTVLL*LQSPCCCSAAAASA
Trigger: AGCAGAAGCAGCAGCCGCCGAGCAGCAGCAAGGACTCTGGAGTCAGAGTAGGACTGTAGGACCGGAGCCTGAGTGGAACAGGAGTGGAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536324.4
CDS CCA 90 bp CAGTGGTCTAGAGAGCCAAGAGAGACTGTCAGGGCAGCCCTGGGGTaGGAGACCTTCCACCCGGCTCAGATCTCCAGCAAGTTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: QWSREPRETVRAALG*ETFHPAQISSKLLC
Trigger: GCAGAGCAACTTGCTGGAGATCTGAGCCGGGTGGAAGGTCTCCCACCCCAGGGCTGCCCTGACAGTCTCTCTTGGCTCTCTAGACCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS CCA 90 bp GCAAGCAGTGGTCTAGAGAGCCAAGAGAGACTGTCAGGGCAGCCCTaGGGTGGGAGACCTTCCACCCGGCTCAGATCTCCAGCAAGTTGC +
Preference number: 5 (lower is better)
Translates to: ASSGLESQERLSGQP*GGRPSTRLRSPASC
Trigger: GCAACTTGCTGGAGATCTGAGCCGGGTGGAAGGTCTCCCACCCCAGGGCTGCCCTGACAGTCTCTCTTGGCTCTCTAGACCACTGCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp GCCGGAGTGCAGGTATCAGGCACAAGGGGAGGGCCTGAGATGAGAGTTTGTGGAGAAGAGCTGTGCCCCTaGGGCACTAGTAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: AGVQVSGTRGGPEMRVCGEELCP*GTSSPG
Trigger: CCCTGGGCTACTAGTGCCCAAGGGGCACAGCTCTTC...TCCACAAACTCTCATCTCAGGCCCTCCCCTTGTGCCTGATACCTGCACTCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS CCA 90 bp AGCCACCAAATTTGCTGCACGCTGCCGTCAGCATGGCCAGGGGACTaGAGCCATAGTGAACTTCCTCCTCAAGCAGGGAGGACGCCATCC +
Preference number: 5 (lower is better)
Translates to: SHQICCTLPSAWPGD*SHSELPPQAGRTPS
Trigger: GGATGGCGTCCTCCCTGCTTGAGGAGGAAGTTCACTATGGCTCCAGTCCCCTGGCCATGCTGACGGCAGCGTGCAGCAAATTTGGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp ACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAAGCGGCGGGCTTTCTCTGGGGTaGCTGGCGAGGCAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: TAGDRKGGSNVTGKARSGGLSLG*LARQKV
Trigger: GACCTTCTGCCTCGCCAGCAACCCCAGAGAAAGCCC...GCCGCTTCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS TCA 90 bp GCCCACAGAGTACGGCTTCTTTGTGCCTGCTTTGCCCAGAGTTGTTaGGTCCCGCAGAGGGCTAGAGCCACCAAATTTGCTGCACGCTGC +
Preference number: 5 (lower is better)
Translates to: AHRVRLLCACFAQSC*VPQRARATKFAARC
Trigger: GCAGCGTGCAGCAAATTTGGTGGCTCTAGCCCTCTGCGGGACTCAACAACTCTGGGCAAAGCAGGCACAAAGAAGCCGTACTCTGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
ENST00000547755.1
CDS TCA 90 bp AGGGTGCATATCCCACCATGGAGTAGGAGTGTTGCCTGGGCCTGGTaGAATGCCTGCATGGATGCCTGCCTTGTACCAGGAGCCATAGGG +
Preference number: 5 (lower is better)
Translates to: RVHIPPWSRSVAWAW*NACMDACLVPGAIG
Trigger: CCCTATGGCTCCTGGTACAAGGCAGGCATCCATGCAGGCATTTCACCAGGCCCAGGCAACACTCCTACTCCATGGTGGGATATGCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
ENST00000547755.1
CDS-3UTR CAA 90 bp CACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTATGTGGGCAGTGTCCCTaGCAGCCCATCACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: HPQTNVLLLDGLPQRAHLCGQCP*QPITLA
Trigger: GGCCAGGGTGATGGGCTGCAAGGGACACTGCCCACA...TAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGTTTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp CACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAGCACCCCGTGGGGGTTaGGCTCCACCACTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: HPQTNVLLLDGLPQRAHLAPRGG*APPLPS
Trigger: AGAAGGGAGTGGTGGAGCCAAACCCCCACGGGGTGC...TAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGTTTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGACTGACTCCAGAGTCCTaGCTGCTGCTCGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: LETAGDRKGGSNVTGKARLTPES*LLLGGC
Trigger: GCAGCCGCCGAGCAGCAGCAAGGACTCTGGAGTCAG...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536324.4
CDS-3UTR CAA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGGCACCCCGTGGGGGTTaGGCTCCACCACTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQAPRGG*APPLPS
Trigger: AGAAGGGAGTGGTGGAGCCAAACCCCCACGGGGTGC...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS GCA 90 bp GGGCTGGATAAGCATCCCCCATGGTTTTGGAGGCTGAAAGGTCACTaGCCACAGAGTACGGCTTCTTTGTGCCTGCTTTGCCCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: GLDKHPPWFWRLKGH*PQSTASLCLLCPEL
Trigger: CAACTCTGGGCAAAGCAGGCACAAAGAAGCCGTACTCTGTGGGCAGTGACCTTTCAGCCTCCAAAACCATGGGGGATGCTTATCCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
ENST00000547755.1
CDS-3UTR CAA 90 bp ACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTCATGGAGTAGGAGTGTaGCCTGGGCCTGGTGAAATG +
Preference number: 5 (lower is better)
Translates to: THSSGGAPPNQCPPVRWAHGVGV*PGPGEM
Trigger: CATTTCACCAGGCCCAGGCAACACTCCTACTCCATG...AGCCCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp TTTGAATCTGATCCTAGAGAAAGCCTTCCCCACCCATTCTTCAGGAGGTGCACCCCACCACCTAGCCAGTaGCCTCCAGGGTGCATATCC +
Preference number: 5 (lower is better)
Translates to: FESDPRESLPHPFFRRCTPPPSQ*PPGCIS
Trigger: GGATATGCACCCTGGAGGCAACTGGCTAGGTGGTGG...GGTGCACCTCCTGAAGAATGGGTGGGGAAGGCTTTCTCTAGGATCAGATTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp CCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGGGGTTTATAGACATCTaGGGGCAAGACATGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PTHSSGGAPPNQCPPVRWGFIDI*GQDMLG
Trigger: CCCCAGCATGTCTTGCCCCAAGATGTCTATAAACCC...CCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp ACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTAAGATGGCAGCTTCGGGTAAAGCGCTaGGAGCAGAGCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: TNVLLLDGLPQRAHLRWQLRVKR*EQSRQV
Trigger: CACCTGCCTGCTCTGCTCCAAGCGCTTTACCCGAAG...CTGCCATCTTAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp TTTGAATCTGATCCTAGAGAAAGCCTTCCCCACCCATTCTTCAGGAGGTGCACCCTAGAGCCACCAAATTaGCTGCACGCTGCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: FESDPRESLPHPFFRRCTLEPPN*LHAAVS
Trigger: GCTGACGGCAGCGTGCAGCAAATTTGGTGGCTCTAG...GGTGCACCTCCTGAAGAATGGGTGGGGAAGGCTTTCTCTAGGATCAGATTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGACAGAGTACGGCTTCTTaGTGCCTGCTTTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: LETAGDRKGGSNVTGKARQSTAS*CLLCPE
Trigger: CTCTGGGCAAAGCAGGCACAAAGAAGCCGTACTCTG...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp CACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTTCCCCAAAGAGCACATCTACAGAGTACGGCTTCTTaGTGCCTGCTTTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: HPQTNVLLLDGLPQRAHLQSTAS*CLLCPE
Trigger: CTCTGGGCAAAGCAGGCACAAAGAAGCCGTACTCTG...TAGATGTGCTCTTTGGGGAAGCCCATCTAACAGGAGGACATTGGTTTGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGAGCATCCCCCATGGTTTaGGAGGCTGAAAGGTCACTG +
Preference number: 5 (lower is better)
Translates to: LETAGDRKGGSNVTGKARASPMV*EAERSL
Trigger: CAGTGACCTTTCAGCCTCCAAAACCATGGGGGATGC...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACGAAGAGCTGTGCCCCTaGGGCACTAGTAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHEELCP*GTSSPG
Trigger: CCCTGGGCTACTAGTGCCCAAGGGGCACAGCTCTTC...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp CTGCAGTCAAGGGAGATGGGGTACATTCCAGTCCTTCTCCCCTCCATAGGACTTGGGTTTATAGACATCTaGGGGCAAGACATGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LQSREMGYIPVLLPSIGLGFIDI*GQDMLG
Trigger: CCCCAGCATGTCTTGCCCCAAGATGTCTATAAACCC...AAGTCCTATGGAGGGGAGAAGGACTGGAATGTACCCCATCTCCCTTGACTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp GTGAGATGGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCAGGGCTTTCTCTGGGGTaGCTGGCGAGGCAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: VRWRNSVGSPNRKCVGVAGLSLG*LARQKV
Trigger: GACCTTCTGCCTCGCCAGCAACCCCAGAGAAAGCCC...TGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCCATCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp GTGAGATGGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCACTGCTTTGCCCAGAGTaGTTGAGTCCCGCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: VRWRNSVGSPNRKCVGVALLCPE*LSPAEG
Trigger: GCCCTCTGCGGGACTCAACAACTCTGGGCAAAGCAG...TGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCCATCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp ACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGATGGGCTTTCTTTGTGCCTGCTTaGCCCAGAGTTGTTGAGTCC +
Preference number: 5 (lower is better)
Translates to: THSSGGAPPNQCPPVRWAFFVPA*PRVVES
Trigger: GGACTCAACAACTCTGGGCAAAGCAGGCACAAAGAA...AGCCCATCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp GTGAGATGGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCACTTCGGGTAAAGCGCTaGGAGCAGAGCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: VRWRNSVGSPNRKCVGVALRVKR*EQSRQV
Trigger: CACCTGCCTGCTCTGCTCCAAGCGCTTTACCCGAAG...TGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCCATCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp TTCCCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGACAAATAGAAAGTGTGTaGGTGTGGCAGGGCCAGAGT +
Preference number: 5 (lower is better)
Translates to: FPTHSSGGAPPNQCPPVRQIESV*VWQGQS
Trigger: ACTCTGGCCCTGCCACACCAACACACTTTCTATTTG...TCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp GTGAGATGGAGAAATAGTGTTGGGAGCCCAAATAGAAAGTGTGTTGGTGTGGCACACCACCAGATCAGCTaGGGGGCCTCTGTCCTCCTA +
Preference number: 5 (lower is better)
Translates to: VRWRNSVGSPNRKCVGVAHHQIS*GASVLL
Trigger: TAGGAGGACAGAGGCCCCCAAGCTGATCTGGTGGTG...TGCCACACCAACACACTTTCTATTTGGGCTCCCAACACTATTTCTCCATCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp TTCCCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGACAATGGTGTAAGAAGTaGGGAAGACTGAAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: FPTHSSGGAPPNQCPPVRQWCKK*GRLKPG
Trigger: TCCAGGCTTCAGTCTTCCCAACTTCTTACACCATTG...TCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp ATGCATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCTAGAGCCACCAAATTaGCTGCACGCTGCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: MHLTRISLAEMDPLPSPALEPPN*LHAAVS
Trigger: GCTGACGGCAGCGTGCAGCAAATTTGGTGGCTCTAG...AGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp CATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTCACCATGGAGTAGGAGTGTaGCCTGGGCCTGGTGAAATG +
Preference number: 5 (lower is better)
Translates to: HLTRISLAEMDPLPSPAHHGVGV*PGPGEM
Trigger: CATTTCACCAGGCCCAGGCAACACTCCTACTCCATG...GTGAGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp CTTGAGACAGCAGGGGACAGAAAAGGAGGATCCAACGTTACAGGAAAGGCACGACAATGGTGTAAGAAGTaGGGAAGACTGAAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: LETAGDRKGGSNVTGKARQWCKK*GRLKPG
Trigger: TCCAGGCTTCAGTCTTCCCAACTTCTTACACCATTG...TCGTGCCTTTCCTGTAACGTTGGATCCTCCTTTTCTGTCCCCTGCTGTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATCACCACCAGATCAGCTaGGGGGCCTCTGTCCTCCTA +
Preference number: 5 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDHHQIS*GASVLL
Trigger: TAGGAGGACAGAGGCCCCCAAGCTGATCTGGTGGTG...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp ATGCATTTGACTAGAATTTCCTTAGCAGAAATGGATCCACTTCCCTCCCCAGCTGCATCCCCCATGGTTTaGGAGGCTGAAAGGTCACTG +
Preference number: 5 (lower is better)
Translates to: MHLTRISLAEMDPLPSPAASPMV*EAERSL
Trigger: CAGTGACCTTTCAGCCTCCAAAACCATGGGGGATGC...AGCTGGGGAGGGAAGTGGATCCATTTCTGCTAAGGAAATTCTAGTCAAATGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp TTCCCCACCCATTCTTCAGGAGGTGCACCCCCAAACCAATGTCCTCCTGTTAGAGATGGAGAAATAGTGTaGGGAGCCCAAATAGAAAGT +
Preference number: 5 (lower is better)
Translates to: FPTHSSGGAPPNQCPPVRDGEIV*GAQIES
Trigger: ACTTTCTATTTGGGCTCCCAACACTATTTCTCCATC...TCTAACAGGAGGACATTGGTTTGGGGGTGCACCTCCTGAAGAATGGGTGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp ATTCATTACTCCTGGTACATAGGGGTTAAATATACAGGCCTGGGGGCAGCCTCCGATGGAGAAATAGTGTaGGGAGCCCAAATAGAAAGT +
Preference number: 5 (lower is better)
Translates to: IHYSWYIGVKYTGLGAASDGEIV*GAQIES
Trigger: ACTTTCTATTTGGGCTCCCAACACTATTTCTCCATC...GGAGGCTGCCCCCAGGCCTGTATATTTAACCCCTATGTACCAGGAGTAATGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS-3UTR CAA 90 bp GATATTAGGGATCCCCCTAATCAAGAGATACCCCATCAACTGTTTAGCAGAGATTTCTTTGTGCCTGCTTaGCCCAGAGTTGTTGAGTCC +
Preference number: 5 (lower is better)
Translates to: DIRDPPNQEIPHQLFSRDFFVPA*PRVVES
Trigger: GGACTCAACAACTCTGGGCAAAGCAGGCACAAAGAA...ATCTCTGCTAAACAGTTGATGGGGTATCTCTTGATTAGGGGGATCCCTAATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS CCA 72 bp GGGCCACTGGGAGGGGGACCCGGGCCTGGTTCTCCATaGGTGCGCTGGTGTTTGCTCAGGTGGTCGCTTCGG +
Preference number: 6 (lower is better)
Translates to: GPLGGGPGPGSP*VRWCLLRWSLR
Trigger: CCGAAGCGACCACCTGAGCAAACACCAGCGCACCCATGGAGAACCAGGCCCGGGTCCCCCTCCCAGTGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
CDS CCA 72 bp GGACCTGTGGGCAGTGTCCCTTGCAGCCCATCACCCTaGCCCTGCCCACCACCTAGCCAGTTGCCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: GPVGSVPCSPSP*PCPPPSQLPPG
Trigger: CCCTGGAGGCAACTGGCTAGGTGGTGGGCAGGGCCAGGGTGATGGGCTGCAAGGGACACTGCCCACAGGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
ENST00000547755.1
CDS GCA 72 bp TTCCTCCGGATCTTGCAGTGCCCGAGGTCCCGACGGTaGCAACATCCCGTTGGCCCCCAGCCTGCCAGTCTC +
Preference number: 6 (lower is better)
Translates to: FLRILQCPRSRR*QHPVGPQPASL
Trigger: GAGACTGGCAGGCTGGGGGCCAACGGGATGTTGGCACCGTCGGGACCTCGGGCACTGCAAGATCCGGAGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547755.1
CDS CCA 72 bp GTTGCTCTGCTCAGGGCTGCCTCCAGGGGCTTTCTCTaGGGTTGCTGGCGAGGCAGAAGGTCGGGGCGTCTG +
Preference number: 6 (lower is better)
Translates to: VALLRAASRGFL*GCWRGRRSGRL
Trigger: CAGACGCCCCGACCTTCTGCCTCGCCAGCAACCCCAGAGAAAGCCCCTGGAGGCAGCCCTGAGCAGAGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
CDS CCA 72 bp GCAGTGCCCGAGGTCCCGACGGTGCCAACATCCCGTTaGCCCCCAGCCTGCCAGTCTCTCATGCCCTTTCTC +
Preference number: 6 (lower is better)
Translates to: AVPEVPTVPTSR*PPACQSLMPFL
Trigger: GAGAAAGGGCATGAGAGACTGGCAGGCTGGGGGCCAACGGGATGTTGGCACCGTCGGGACCTCGGGCACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547755.1
CDS CAA 72 bp TGCAGTGCCCGAGGTCCCGACGGTGCCAACATCCCGTaGGCCCCCAGCCTGCCAGTCTCTCATGCCCTTTCT +
Preference number: 6 (lower is better)
Translates to: CSARGPDGANIP*APSLPVSHALS
Trigger: AGAAAGGGCATGAGAGACTGGCAGGCTGGGGGCCAACGGGATGTTGGCACCGTCGGGACCTCGGGCACTGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547755.1
CDS CAA 90 bp TCCGGATCTTGCAGTGCCCGAGGTCCCGACGGTGCCAACATCCCGTaGGCCCCCAGCCTGCCAGTCTCTCATGCCCTTTCTCTTCCCCAT +
Preference number: 6 (lower is better)
Translates to: SGSCSARGPDGANIP*APSLPVSHALSLPH
Trigger: ATGGGGAAGAGAAAGGGCATGAGAGACTGGCAGGCTGGGGGCCAACGGGATGTTGGCACCGTCGGGACCTCGGGCACTGCAAGATCCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547755.1
CDS CAA 90 bp GCCGTAGCTTTCTCGAGGCTGCATCCAAGCTTCTTCCTCCGGATCTaGCAGTGCCCGAGGTCCCGACGGTGCCAACATCCCGTTGGCCCC +
Preference number: 6 (lower is better)
Translates to: AVAFSRLHPSFFLRI*QCPRSRRCQHPVGP
Trigger: GGGGCCAACGGGATGTTGGCACCGTCGGGACCTCGGGCACTGCAAGATCCGGAGGAAGAAGCTTGGATGCAGCCTCGAGAAAGCTACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547755.1
CDS GCA 72 bp CCGCAGAGGGCTAGAGCCACCAAATTTGCTGCACGCTaGCGTCAGCATGGCCAGGGGACTGGAGCCATAGTG +
Preference number: 6 (lower is better)
Translates to: PQRARATKFAAR*RQHGQGTGAIV
Trigger: CACTATGGCTCCAGTCCCCTGGCCATGCTGACGGCAGCGTGCAGCAAATTTGGTGGCTCTAGCCCTCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
ENST00000547755.1
CDS GCA 72 bp GGGAGACCTTCCACCCGGCTCAGATCTCCAGCAAGTTaGTCTGCTCAGGGCTGCCTCCAGGGGCTTTCTCTG +
Preference number: 6 (lower is better)
Translates to: GRPSTRLRSPAS*SAQGCLQGLSL
Trigger: CAGAGAAAGCCCCTGGAGGCAGCCCTGAGCAGAGCAACTTGCTGGAGATCTGAGCCGGGTGGAAGGTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS GCA 72 bp AGGCTGCATCCAAGCTTCTTCCTCCGGATCTTGCAGTaGCCGAGGTCCCGACGGTGCCAACATCCCGTTGGC +
Preference number: 6 (lower is better)
Translates to: RLHPSFFLRILQ*PRSRRCQHPVG
Trigger: GCCAACGGGATGTTGGCACCGTCGGGACCTCGGGCACTGCAAGATCCGGAGGAAGAAGCTTGGATGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547755.1
CDS GCA 72 bp TCTCGAGGCTGCATCCAAGCTTCTTCCTCCGGATCTTaGAGTGCCCGAGGTCCCGACGGTGCCAACATCCCG +
Preference number: 6 (lower is better)
Translates to: SRGCIQASSSGS*SARGPDGANIP
Trigger: CGGGATGTTGGCACCGTCGGGACCTCGGGCACTGCAAGATCCGGAGGAAGAAGCTTGGATGCAGCCTCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547755.1
CDS CCA 72 bp GGTCTAGAGAGCCAAGAGAGACTGTCAGGGCAGCCCTaGGGTGGGAGACCTTCCACCCGGCTCAGATCTCCA +
Preference number: 6 (lower is better)
Translates to: GLESQERLSGQP*GGRPSTRLRSP
Trigger: TGGAGATCTGAGCCGGGTGGAAGGTCTCCCACCCCAGGGCTGCCCTGACAGTCTCTCTTGGCTCTCTAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303846.3
ENST00000536324.4
CDS TCA 72 bp CTGTTCCACTCAGGCTCCGGTCCTACAGTCCTACTCTaGCTCCAGAGTCCTTGCTGCTGCTCGGCGGCTGCT +
Preference number: 6 (lower is better)
Translates to: LFHSGSGPTVLL*LQSPCCCSAAA
Trigger: AGCAGCCGCCGAGCAGCAGCAAGGACTCTGGAGTCAGAGTAGGACTGTAGGACCGGAGCCTGAGTGGAACAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536324.4
ENST00000537210.2
CDS CAA 72 bp TTCTCGAGGCTGCATCCAAGCTTCTTCCTCCGGATCTaGCAGTGCCCGAGGTCCCGACGGTGCCAACATCCC +
Preference number: 6 (lower is better)
Translates to: FSRLHPSFFLRI*QCPRSRRCQHP
Trigger: GGGATGTTGGCACCGTCGGGACCTCGGGCACTGCAAGATCCGGAGGAAGAAGCTTGGATGCAGCCTCGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547755.1
CDS CAA 90 bp AGCCAGTTGCCTCCAGGGTGCATATCCCACCATGGAGTAGGAGTGTaGCCTGGGCCTGGTGAAATGCCTGCATGGATGCCTGCCTTGTAC +
Preference number: 6 (lower is better)
Translates to: SQLPPGCISHHGVGV*PGPGEMPAWMPALY
Trigger: GTACAAGGCAGGCATCCATGCAGGCATTTCACCAGGCCCAGGCAACACTCCTACTCCATGGTGGGATATGCACCCTGGAGGCAACTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
ENST00000547755.1
CDS GCA 72 bp GAGTGTTGCCTGGGCCTGGTGAAATGCCTGCATGGATaGCTGCCTTGTACCAGGAGCCATAGGGGTGTGTCA +
Preference number: 6 (lower is better)
Translates to: ECCLGLVKCLHG*LPCTRSHRGVS
Trigger: TGACACACCCCTATGGCTCCTGGTACAAGGCAGGCATCCATGCAGGCATTTCACCAGGCCCAGGCAACACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
ENST00000547755.1
CDS CAA 72 bp CCTCCAGGGTGCATATCCCACCATGGAGTAGGAGTGTaGCCTGGGCCTGGTGAAATGCCTGCATGGATGCCT +
Preference number: 6 (lower is better)
Translates to: PPGCISHHGVGV*PGPGEMPAWMP
Trigger: AGGCATCCATGCAGGCATTTCACCAGGCCCAGGCAACACTCCTACTCCATGGTGGGATATGCACCCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
ENST00000547755.1
CDS CAA 90 bp GCTGAAAGGTCACTGCCCACAGAGTACGGCTTCTTTGTGCCTGCTTaGCCCAGAGTTGTTGAGTCCCGCAGAGGGCTAGAGCCACCAAAT +
Preference number: 6 (lower is better)
Translates to: AERSLPTEYGFFVPA*PRVVESRRGLEPPN
Trigger: ATTTGGTGGCTCTAGCCCTCTGCGGGACTCAACAACTCTGGGCAAAGCAGGCACAAAGAAGCCGTACTCTGTGGGCAGTGACCTTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
ENST00000547755.1
CDS GCA 72 bp CTGAAAGGTCACTGCCCACAGAGTACGGCTTCTTTGTaGCTGCTTTGCCCAGAGTTGTTGAGTCCCGCAGAG +
Preference number: 6 (lower is better)
Translates to: LKGHCPQSTASL*LLCPELLSPAE
Trigger: CTCTGCGGGACTCAACAACTCTGGGCAAAGCAGGCACAAAGAAGCCGTACTCTGTGGGCAGTGACCTTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
ENST00000547755.1
CDS TCA 72 bp GTACGGCTTCTTTGTGCCTGCTTTGCCCAGAGTTGTTaGGTCCCGCAGAGGGCTAGAGCCACCAAATTTGCT +
Preference number: 6 (lower is better)
Translates to: VRLLCACFAQSC*VPQRARATKFA
Trigger: AGCAAATTTGGTGGCTCTAGCCCTCTGCGGGACTCAACAACTCTGGGCAAAGCAGGCACAAAGAAGCCGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
ENST00000547755.1
CDS CAA 72 bp CCCACTATTTCCCACTGCCTTGGGTTTATAGACATCTaGGGGCAAGACATGCTGGGGCCCTGGTTGCAAGAG +
Preference number: 6 (lower is better)
Translates to: PTISHCLGFIDI*GQDMLGPWLQE
Trigger: CTCTTGCAACCAGGGCCCCAGCATGTCTTGCCCCAAGATGTCTATAAACCCAAGGCAGTGGGAAATAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303846.3
ENST00000536324.4
ENST00000537210.2
ENST00000547755.1