Pregenerated sensors for SP5 (Homo sapiens)
Ensembl gene IDs: ENSG00000204335Ensembl transcript IDs: ENST00000375281.4, ENST00000487037.1
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGCAACGGAGAGGGTCCGTCTGCTGAGTCTCCCCTCCGCCAGCTaGCCACAGGTCCCCGGATCTCTCGCAGAGGTGCTGGGAAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: QATERVRLLSLPSAS*PQVPGSLAEVLGRG Trigger: CCCCCTTCCCAGCACCTCTGCGAGAGATCCGGGGACCTGTGGGCAGCTGGCGGAGGGGAGACTCAGCAGACGGACCCTCTCCGTTGCCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR CCA 90 bp | TCCCTATGTCCGAAGGCAGCGGAAGTTGGAAGCCTGGCTCCATTTTaGGAGGCAGGCAACGGAGAGGGTCCGTCTGCTGAGTCTCCCCTC | + |
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Preference number: 1 (lower is better) Translates to: SLCPKAAEVGSLAPF*EAGNGEGPSAESPL Trigger: GAGGGGAGACTCAGCAGACGGACCCTCTCCGTTGCCTGCCTCCCAAAATGGAGCCAGGCTTCCAACTTCCGCTGCCTTCGGACATAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR TCA 90 bp | ATACAAGGCCAGACCAGGGTGGTCCCCCGAAACTGTAGGTCTCCCTaGCGGTGGGAACGGTTTAGAGTTTGGAACCGCCCTGGCGTACGG | + |
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Preference number: 1 (lower is better) Translates to: IQGQTRVVPRNCRSP*RWERFRVWNRPGVR Trigger: CCGTACGCCAGGGCGGTTCCAAACTCTAAACCGTTCCCACCGTCAGGGAGACCTACAGTTTCGGGGGACCACCCTGGTCTGGCCTTGTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR CCA 90 bp | CTATTCAGTTCAGCAGCATTTCCTATATACAAGGCCAGACCAGGGTaGTCCCCCGAAACTGTAGGTCTCCCTGACGGTGGGAACGGTTTA | + |
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Preference number: 1 (lower is better) Translates to: LFSSAAFPIYKARPG*SPETVGLPDGGNGL Trigger: TAAACCGTTCCCACCGTCAGGGAGACCTACAGTTTCGGGGGACCACCCTGGTCTGGCCTTGTATATAGGAAATGCTGCTGAACTGAATAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR TCA 90 bp | GTAGTGACCCCTGAGTTAAAGTATTTATTTTCACGCTGCAACTGCTaGTCACTTTACAGAGACATATCATGCTGTAGCTCTGCATGGAGC | + |
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Preference number: 1 (lower is better) Translates to: VVTPELKYLFSRCNC*SLYRDISCCSSAWS Trigger: GCTCCATGCAGAGCTACAGCATGATATGTCTCTGTAAAGTGATCAGCAGTTGCAGCGTGAAAATAAATACTTTAACTCAGGGGTCACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR-3UTR GCA 90 bp | AACCGCCCTGGCGTACGGCAGAGCTCCCAATTACAATCCAAATGCCCCAGCCCCCTCCCCTCCGCCAGCTaGCCACAGGTCCCCGGATCT | + |
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Preference number: 2 (lower is better) Translates to: NRPGVRQSSQLQSKCPSPLPSAS*PQVPGS Trigger: AGATCCGGGGACCTGTGGGCAGCTGGCGGAGGGGAG...GGGGCTGGGGCATTTGGATTGTAATTGGGAGCTCTGCCGTACGCCAGGGCGGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR-3UTR CCA 90 bp | CCGCCCTGGCGTACGGCAGAGCTCCCAATTACAATCCAAATGCCCCAGCCCCAACTACCTCCCCGCTCCTaGGAACTGGGTCCCTATGTC | + |
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Preference number: 2 (lower is better) Translates to: PPWRTAELPITIQMPQPQLPPRS*ELGPYV Trigger: GACATAGGGACCCAGTTCCCAGGAGCGGGGAGGTAG...TTGGGGCTGGGGCATTTGGATTGTAATTGGGAGCTCTGCCGTACGCCAGGGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR-3UTR CCA 90 bp | GACTATAGGAACCATCAAATTCCCGGGGAAACCCGACCGCTTAGTACAGCCACCCTCTCGCAGAGGTGCTaGGAAGGGGGTCCACCTCCG | + |
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Preference number: 2 (lower is better) Translates to: DYRNHQIPGETRPLSTATLSQRC*EGGPPP Trigger: CGGAGGTGGACCCCCTTCCCAGCACCTCTGCGAGAG...GGTGGCTGTACTAAGCGGTCGGGTTTCCCCGGGAATTTGATGGTTCCTATAGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCATTTCCTATATACAAGGCCAGACCAGGGTGGTCCCCCGAAACTGTAGGCCCGCTCCTGGGAACTaGGTCCCTATGTCCGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: SSISYIQGQTRVVPRNCRPAPGN*VPMSEG Trigger: GCCTTCGGACATAGGGACCCAGTTCCCAGGAGCGGG...CCTACAGTTTCGGGGGACCACCCTGGTCTGGCCTTGTATATAGGAAATGCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR-3UTR CCA 90 bp | CCCAAACCGGTCCTAGCGAAAACCCGAGCACTGTTTCAAATCTCCCAAGTTCCTAGCCTGGCTCCATTTTaGGAGGCAGGCAACGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: PKPVLAKTRALFQISQVPSLAPF*EAGNGE Trigger: CTCTCCGTTGCCTGCCTCCCAAAATGGAGCCAGGCT...AGGAACTTGGGAGATTTGAAACAGTGCTCGGGTTTTCGCTAGGACCGGTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR-3UTR CCA 90 bp | CCCAGAAGAAGAAAAGATCAAATGAGACCGGCTCAACGGGGTCTTCCTGTAGTGAGTTTGGAACCGCCCTaGCGTACGGCAGAGCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: PRRRKDQMRPAQRGLPVVSLEPP*RTAELP Trigger: TGGGAGCTCTGCCGTACGCCAGGGCGGTTCCAAACT...CACTACAGGAAGACCCCGTTGAGCCGGTCTCATTTGATCTTTTCTTCTTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR-3UTR CCA 90 bp | CCGGGGAAACCCGACCGCTTAGTACAGCCACCCAGAAGAAGAAAAGATCAAATGAAGGCCAGACCAGGGTaGTCCCCCGAAACTGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: PGKPDRLVQPPRRRKDQMKARPG*SPETVG Trigger: ACCTACAGTTTCGGGGGACCACCCTGGTCTGGCCTT...CATTTGATCTTTTCTTCTTCTGGGTGGCTGTACTAAGCGGTCGGGTTTCCCCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR-3UTR CCA 90 bp | CCCAAACCGGTCCTAGCGAAAACCCGAGCACTGTTTCAAATCTCCCAAGTTCCTCGGAAGTTGGAAGCCTaGCTCCATTTTGGGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: PKPVLAKTRALFQISQVPRKLEA*LHFGRQ Trigger: CTGCCTCCCAAAATGGAGCCAGGCTTCCAACTTCCG...AGGAACTTGGGAGATTTGAAACAGTGCTCGGGTTTTCGCTAGGACCGGTTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR-3UTR TCA 90 bp | CCCAAACCGGTCCTAGCGAAAACCCGAGCACTGTTTCAAATCTCCCAAGTTCCTAACTGTAGGTCTCCCTaGCGGTGGGAACGGTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: PKPVLAKTRALFQISQVPNCRSP*RWERFR Trigger: TCTAAACCGTTCCCACCGTCAGGGAGACCTACAGTT...AGGAACTTGGGAGATTTGAAACAGTGCTCGGGTTTTCGCTAGGACCGGTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR-3UTR CCA 90 bp | CCCAAACCGGTCCTAGCGAAAACCCGAGCACTGTTTCAAATCTCCCAAGTTCCTGAAGGCAGCGGAAGTTaGAAGCCTGGCTCCATTTTG | + |
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Preference number: 2 (lower is better) Translates to: PKPVLAKTRALFQISQVPEGSGS*KPGSIL Trigger: CAAAATGGAGCCAGGCTTCCAACTTCCGCTGCCTTC...AGGAACTTGGGAGATTTGAAACAGTGCTCGGGTTTTCGCTAGGACCGGTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGACATATCATGCTGTAGCTCTGCATGGAGCTGAAGACAAAAGCAACATTGATCTCTCGCAGAGGTaGTGGGAAGGGGGTCCACCT | + |
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Preference number: 2 (lower is better) Translates to: TETYHAVALHGAEDKSNIDLSQR*WEGGPP Trigger: AGGTGGACCCCCTTCCCAGCACCTCTGCGAGAGATC...AATGTTGCTTTTGTCTTCAGCTCCATGCAGAGCTACAGCATGATATGTCTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR-3UTR GCA 90 bp | GCCACCCAGAAGAAGAAAAGATCAAATGAGACCGGCTCAACGGGGTCTTCCTGTTACAGAGACATATCATaGTGTAGCTCTGCATGGAGC | + |
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Preference number: 2 (lower is better) Translates to: ATQKKKRSNETGSTGSSCYRDIS*CSSAWS Trigger: GCTCCATGCAGAGCTACAGCATGATATGTCTCTGTA...ACAGGAAGACCCCGTTGAGCCGGTCTCATTTGATCTTTTCTTCTTCTGGGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR CCA 72 bp | CCGAAGGCAGCGGAAGTTGGAAGCCTGGCTCCATTTTaGGAGGCAGGCAACGGAGAGGGTCCGTCTGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: PKAAEVGSLAPF*EAGNGEGPSAE Trigger: CTCAGCAGACGGACCCTCTCCGTTGCCTGCCTCCCAAAATGGAGCCAGGCTTCCAACTTCCGCTGCCTTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR TCA 72 bp | CAGACCAGGGTGGTCCCCCGAAACTGTAGGTCTCCCTaGCGGTGGGAACGGTTTAGAGTTTGGAACCGCCCT | + |
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Preference number: 3 (lower is better) Translates to: QTRVVPRNCRSP*RWERFRVWNRP Trigger: AGGGCGGTTCCAAACTCTAAACCGTTCCCACCGTCAGGGAGACCTACAGTTTCGGGGGACCACCCTGGTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR-3UTR CAA 90 bp | GGAACCGCCCTGGCGTACGGCAGAGCTCCCAATTACAATCCAAATGCCCCAGCCCGAAGGCAGCGGAAGTaGGAAGCCTGGCTCCATTTT | + |
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Preference number: 3 (lower is better) Translates to: GTALAYGRAPNYNPNAPARRQRK*EAWLHF Trigger: AAAATGGAGCCAGGCTTCCAACTTCCGCTGCCTTCG...GGCTGGGGCATTTGGATTGTAATTGGGAGCTCTGCCGTACGCCAGGGCGGTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| 3UTR CCA 72 bp | TCAGCAGCATTTCCTATATACAAGGCCAGACCAGGGTaGTCCCCCGAAACTGTAGGTCTCCCTGACGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: SAAFPIYKARPG*SPETVGLPDGG Trigger: CCCACCGTCAGGGAGACCTACAGTTTCGGGGGACCACCCTGGTCTGGCCTTGTATATAGGAAATGCTGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR CCA 90 bp | TTTGGGAGGCAGGCAACGGAGAGGGTCCGTCTGCTGAGTCTCCCCTCCGCCAGCGCGTCAGCCCCAAGCTaGGATGCGGGGGCGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: FGRQATERVRLLSLPSASASAPS*DAGAAV Trigger: CACTGCCGCCCCCGCATCCCAGCTTGGGGCTGACGC...GCTGGCGGAGGGGAGACTCAGCAGACGGACCCTCTCCGTTGCCTGCCTCCCAAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR CCA 90 bp | TTTGGGAGGCAGGCAACGGAGAGGGTCCGTCTGCTGAGTCTCCCCTCCGCCAGCCAGGTTGGAGTAGCCTaGCGGCAGCGCGGCCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: FGRQATERVRLLSLPSASQVGVA*RQRGLR Trigger: GCGCAGGCCGCGCTGCCGCCAGGCTACTCCAACCTG...GCTGGCGGAGGGGAGACTCAGCAGACGGACCCTCTCCGTTGCCTGCCTCCCAAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR GCA 90 bp | AACCGCCCTGGCGTACGGCAGAGCTCCCAATTACAATCCAAATGCCCCAGCCCCTGCCTCCCTGGCGCCTaGTCTGAGCGCCGGGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: NRPGVRQSSQLQSKCPSPCLPGA*SERRGP Trigger: AGGGCCCCGGCGCTCAGAGCAGGCGCCAGGGAGGCA...GGGGCTGGGGCATTTGGATTGTAATTGGGAGCTCTGCCGTACGCCAGGGCGGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR CCA 90 bp | GGCAGCGGAAGTTGGAAGCCTGGCTCCATTTTGGGAGGCAGGCAACGGAGAGGGGGTCCGGGGAGGCGCTaGGGGTGCGGTCCTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: GSGSWKPGSILGGRQRRGGPGRR*GCGPGE Trigger: TTCTCCAGGACCGCACCCCCAGCGCCTCCCCGGACC...CCCTCTCCGTTGCCTGCCTCCCAAAATGGAGCCAGGCTTCCAACTTCCGCTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR TCA 90 bp | GCGGAAGTTGGAAGCCTGGCTCCATTTTGGGAGGCAGGCAACGGAGAGGGTCCGGAAGAGCCTGGAGGGTaGGCCCAGCGCGGGGTCGTA | + |
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Preference number: 4 (lower is better) Translates to: AEVGSLAPFWEAGNGEGPEEPGG*AQRGVV Trigger: TACGACCCCGCGCTGGGCTCACCCTCCAGGCTCTTC...CGGACCCTCTCCGTTGCCTGCCTCCCAAAATGGAGCCAGGCTTCCAACTTCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR CCA 90 bp | CCGCCCTGGCGTACGGCAGAGCTCCCAATTACAATCCAAATGCCCCAGCCCCAAGGGTTGGGTGACAACTaGCGGCAGGTGGGCGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: PPWRTAELPITIQMPQPQGLGDN*RQVGGG Trigger: CCCGCCGCCCACCTGCCGCCAGTTGTCACCCAACCC...TTGGGGCTGGGGCATTTGGATTGTAATTGGGAGCTCTGCCGTACGCCAGGGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR GCA 90 bp | CCGCCCTGGCGTACGGCAGAGCTCCCAATTACAATCCAAATGCCCCAGCCCCAAGGGAGGCGCTGGGGGTaGGGTCCTGGAGAAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PPWRTAELPITIQMPQPQGRRWG*GPGERP Trigger: AGGCCTTTCTCCAGGACCGCACCCCCAGCGCCTCCC...TTGGGGCTGGGGCATTTGGATTGTAATTGGGAGCTCTGCCGTACGCCAGGGCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR CCA 90 bp | AACCGCCCTGGCGTACGGCAGAGCTCCCAATTACAATCCAAATGCCCCAGCCCCACGGGTGGAAGAGCCTaGAGGGTGAGCCCAGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: NRPGVRQSSQLQSKCPSPTGGRA*RVSPAR Trigger: CCGCGCTGGGCTCACCCTCCAGGCTCTTCCACCCGT...GGGGCTGGGGCATTTGGATTGTAATTGGGAGCTCTGCCGTACGCCAGGGCGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR CCA 90 bp | TTTGGGAGGCAGGCAACGGAGAGGGTCCGTCTGCTGAGTCTCCCCTCCGCCAGCAGTTTGGAACCGCCCTaGCGTACGGCAGAGCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: FGRQATERVRLLSLPSASSLEPP*RTAELP Trigger: TGGGAGCTCTGCCGTACGCCAGGGCGGTTCCAAACT...GCTGGCGGAGGGGAGACTCAGCAGACGGACCCTCTCCGTTGCCTGCCTCCCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR CCA 90 bp | CCGCCCTGGCGTACGGCAGAGCTCCCAATTACAATCCAAATGCCCCAGCCCCAACTCTCGCAGAGGTGCTaGGAAGGGGGTCCACCTCCG | + |
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Preference number: 4 (lower is better) Translates to: PPWRTAELPITIQMPQPQLSQRC*EGGPPP Trigger: CGGAGGTGGACCCCCTTCCCAGCACCTCTGCGAGAG...TTGGGGCTGGGGCATTTGGATTGTAATTGGGAGCTCTGCCGTACGCCAGGGCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR GCA 90 bp | TTTCCTATATACAAGGCCAGACCAGGGTGGTCCCCCGAAACTGTAGGTCTCCCTCGCCCGGCTGGCCGATaGGGCTACAGGTGGCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: FPIYKARPGWSPETVGLPRPAGR*GYRWRP Trigger: TGGCCGCCACCTGTAGCCGCATCGGCCAGCCGGGCG...AGGGAGACCTACAGTTTCGGGGGACCACCCTGGTCTGGCCTTGTATATAGGAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR GCA 90 bp | CCGGGGAAACCCGACCGCTTAGTACAGCCACCCAGAAGAAGAAAAGATCAAATGCCAGGGGCGAGTGCTTaGCCAGGTCCGGGGAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: PGKPDRLVQPPRRRKDQMPGASA*PGPGRR Trigger: GCGCCTCCCCGGACCTGGGCAAGCACTCGCCCCTGG...CATTTGATCTTTTCTTCTTCTGGGTGGCTGTACTAAGCGGTCGGGTTTCCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR CCA 90 bp | CCGCCCTGGCGTACGGCAGAGCTCCCAATTACAATCCAAATGCCCCAGCCCCAAAGCAGCGCGGCGATCTaGCTCTGGTACTGCGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: PPWRTAELPITIQMPQPQSSAAI*LWYCAK Trigger: CTTTGCGCAGTACCAGAGCCAGATCGCCGCGCTGCT...TTGGGGCTGGGGCATTTGGATTGTAATTGGGAGCTCTGCCGTACGCCAGGGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR GCA 90 bp | TTTCCTATATACAAGGCCAGACCAGGGTGGTCCCCCGAAACTGTAGGTCTCCCTCTCCCCTCCGCCAGCTaGCCACAGGTCCCCGGATCT | + |
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Preference number: 4 (lower is better) Translates to: FPIYKARPGWSPETVGLPLPSAS*PQVPGS Trigger: AGATCCGGGGACCTGTGGGCAGCTGGCGGAGGGGAG...AGGGAGACCTACAGTTTCGGGGGACCACCCTGGTCTGGCCTTGTATATAGGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR CCA 90 bp | CCGGGGAAACCCGACCGCTTAGTACAGCCACCCAGAAGAAGAAAAGATCAAATGGCCGCCGCCGAGGCATaGACACCCGAAGGCGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: PGKPDRLVQPPRRRKDQMAAAEA*TPEGED Trigger: GTCCTCGCCTTCGGGTGTCCATGCCTCGGCGGCGGC...CATTTGATCTTTTCTTCTTCTGGGTGGCTGTACTAAGCGGTCGGGTTTCCCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR CCA 90 bp | GCGGAAGTTGGAAGCCTGGCTCCATTTTGGGAGGCAGGCAACGGAGAGGGTCCGGAACGGTTTAGAGTTTaGAACCGCCCTGGCGTACGG | + |
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Preference number: 4 (lower is better) Translates to: AEVGSLAPFWEAGNGEGPERFRV*NRPGVR Trigger: CCGTACGCCAGGGCGGTTCCAAACTCTAAACCGTTC...CGGACCCTCTCCGTTGCCTGCCTCCCAAAATGGAGCCAGGCTTCCAACTTCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR TCA 90 bp | AGCAGCATTTCCTATATACAAGGCCAGACCAGGGTGGTCCCCCGAAACTGTAGGAGAGGGTCCGTCTGCTaGGTCTCCCCTCCGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SSISYIQGQTRVVPRNCRRGSVC*VSPPPA Trigger: AGCTGGCGGAGGGGAGACTCAGCAGACGGACCCTCT...CCTACAGTTTCGGGGGACCACCCTGGTCTGGCCTTGTATATAGGAAATGCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR GCA 90 bp | CCGGGGAAACCCGACCGCTTAGTACAGCCACCCAGAAGAAGAAAAGATCAAATGGCCATGGCTACGGCTTaGAGGCCCCTGGCTGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: PGKPDRLVQPPRRRKDQMAMATA*RPLAAE Trigger: CTCCGCAGCCAGGGGCCTGCAAGCCGTAGCCATGGC...CATTTGATCTTTTCTTCTTCTGGGTGGCTGTACTAAGCGGTCGGGTTTCCCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR GCA 90 bp | CCCAAACCGGTCCTAGCGAAAACCCGAGCACTGTTTCAAATCTCCCAAGTTCCTGCCCCGAAGGACGGCTaGAGGTGCGTCTTCTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: PKPVLAKTRALFQISQVPAPKDG*RCVFCG Trigger: GCCGCAGAAGACGCACCTGCAGCCGTCCTTCGGGGC...AGGAACTTGGGAGATTTGAAACAGTGCTCGGGTTTTCGCTAGGACCGGTTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR GCA 90 bp | CCGGTCCTAGCGAAAACCCGAGCACTGTTTCAAATCTCCCAAGTTCCTTTCTATAGTGCGCCTGGCGAGTaGGCCGGCATGTCGGCGGTC | + |
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Preference number: 4 (lower is better) Translates to: PVLAKTRALFQISQVPFYSAPGE*AGMSAV Trigger: GACCGCCGACATGCCGGCGCACTCGCCAGGCGCACT...ATAGAAAGGAACTTGGGAGATTTGAAACAGTGCTCGGGTTTTCGCTAGGACCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR CCA 90 bp | CCGGGGAAACCCGACCGCTTAGTACAGCCACCCAGAAGAAGAAAAGATCAAATGCTGGGGGTGCGGTCCTaGAGAAAGGCCTGCAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: PGKPDRLVQPPRRRKDQMLGVRS*RKACSE Trigger: CTCGCTGCAGGCCTTTCTCCAGGACCGCACCCCCAG...CATTTGATCTTTTCTTCTTCTGGGTGGCTGTACTAAGCGGTCGGGTTTCCCCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR CCA 90 bp | GCCACCCAGAAGAAGAAAAGATCAAATGAGACCGGCTCAACGGGGTCTTCCTGTTCGGCGGTCCACGGGTaGAAGAGCCTGGAGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: ATQKKKRSNETGSTGSSCSAVHG*KSLEGE Trigger: CTCACCCTCCAGGCTCTTCCACCCGTGGACCGCCGA...ACAGGAAGACCCCGTTGAGCCGGTCTCATTTGATCTTTTCTTCTTCTGGGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR CCA 90 bp | GCTGATCACTTTACAGAGACATATCATGCTGTAGCTCTGCATGGAGCTGAAGACGGGCGGCAGTGCGCCTaGCGAGTGCGCCGGCATGTC | + |
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Preference number: 4 (lower is better) Translates to: ADHFTETYHAVALHGAEDGRQCA*RVRRHV Trigger: GACATGCCGGCGCACTCGCCAGGCGCACTGCCGCCC...GTCTTCAGCTCCATGCAGAGCTACAGCATGATATGTCTCTGTAAAGTGATCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR CCA 90 bp | AACCGCCCTGGCGTACGGCAGAGCTCCCAATTACAATCCAAATGCCCCAGCCCCGAAGGCAGCGGAAGTTaGAAGCCTGGCTCCATTTTG | + |
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Preference number: 4 (lower is better) Translates to: NRPGVRQSSQLQSKCPSPEGSGS*KPGSIL Trigger: CAAAATGGAGCCAGGCTTCCAACTTCCGCTGCCTTC...GGGGCTGGGGCATTTGGATTGTAATTGGGAGCTCTGCCGTACGCCAGGGCGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR TCA 90 bp | ACTGCTGATCACTTTACAGAGACATATCATGCTGTAGCTCTGCATGGAGCTGAAGGGGGCCGGGTTGGGTaGCAACTGGCGGCAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: TADHFTETYHAVALHGAEGGRVG*QLAAGG Trigger: CCCACCTGCCGCCAGTTGTCACCCAACCCGGCCCCC...TTCAGCTCCATGCAGAGCTACAGCATGATATGTCTCTGTAAAGTGATCAGCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS-3UTR GCA 90 bp | CCGGTCCTAGCGAAAACCCGAGCACTGTTTCAAATCTCCCAAGTTCCTTTCTATGGTGGCGGCCAGCAATaGCAGGGGCGAGTGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PVLAKTRALFQISQVPFYGGGQQ*QGRVLA Trigger: GGCAAGCACTCGCCCCTGGCATTGCTGGCCGCCACC...ATAGAAAGGAACTTGGGAGATTTGAAACAGTGCTCGGGTTTTCGCTAGGACCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR GCA 90 bp | GCTGATCACTTTACAGAGACATATCATGCTGTAGCTCTGCATGGAGCTGAAGACCGCCCGCCTGCGGGATaGTCCACCACGGGAGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ADHFTETYHAVALHGAEDRPPAG*STTGGR Trigger: ACGACCTCCCGTGGTGGAGCATCCCGCAGGCGGGCG...GTCTTCAGCTCCATGCAGAGCTACAGCATGATATGTCTCTGTAAAGTGATCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR GCA 90 bp | GACTATAGGAACCATCAAATTCCCGGGGAAACCCGACCGCTTAGTACAGCCACCGATCTCTCGCAGAGGTaGTGGGAAGGGGGTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: DYRNHQIPGETRPLSTATDLSQR*WEGGPP Trigger: AGGTGGACCCCCTTCCCAGCACCTCTGCGAGAGATC...GGTGGCTGTACTAAGCGGTCGGGTTTCCCCGGGAATTTGATGGTTCCTATAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR CCA 90 bp | GTTCCTTTCTATTCAGTTCAGCAGCATTTCCTATATACAAGGCCAGACCAGGGTCGGCCACCGCGGCCATaGCTACGGCTTGCAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VPFYSVQQHFLYTRPDQGRPPRP*LRLAGP Trigger: GGGGCCTGCAAGCCGTAGCCATGGCCGCGGTGGCCG...ACCCTGGTCTGGCCTTGTATATAGGAAATGCTGCTGAACTGAATAGAAAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR CCA 90 bp | CCCAGAAGAAGAAAAGATCAAATGAGACCGGCTCAACGGGGTCTTCCTGTAGTGCGATGCGGCTACAGGTaGCGGCCAGCAATGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRRRKDQMRPAQRGLPVVRCGYR*RPAMPG Trigger: CCCTGGCATTGCTGGCCGCCACCTGTAGCCGCATCG...CACTACAGGAAGACCCCGTTGAGCCGGTCTCATTTGATCTTTTCTTCTTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR CCA 90 bp | AGCAGCATTTCCTATATACAAGGCCAGACCAGGGTGGTCCCCCGAAACTGTAGGGCGGCGATCTGGCTCTaGTACTGCGCAAAGTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSISYIQGQTRVVPRNCRAAIWL*YCAKSD Trigger: GTCGGACTTTGCGCAGTACCAGAGCCAGATCGCCGC...CCTACAGTTTCGGGGGACCACCCTGGTCTGGCCTTGTATATAGGAAATGCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR TCA 90 bp | CCGGGGAAACCCGACCGCTTAGTACAGCCACCCAGAAGAAGAAAAGATCAAATGTCGAGGGCAGCATCTTaGCCGGCGAGAACTCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGKPDRLVQPPRRRKDQMSRAAS*PARTRR Trigger: CCTACGAGTTCTCGCCGGTCAAGATGCTGCCCTCGA...CATTTGATCTTTTCTTCTTCTGGGTGGCTGTACTAAGCGGTCGGGTTTCCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR CCA 90 bp | GTTCCTTTCTATTCAGTTCAGCAGCATTTCCTATATACAAGGCCAGACCAGGGTCGTCGGGGGCCGGGTTaGGTGACAACTGGCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPFYSVQQHFLYTRPDQGRRGPG*VTTGGR Trigger: CCTGCCGCCAGTTGTCACCCAACCCGGCCCCCGACG...ACCCTGGTCTGGCCTTGTATATAGGAAATGCTGCTGAACTGAATAGAAAGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR GCA 90 bp | GCTGATCACTTTACAGAGACATATCATGCTGTAGCTCTGCATGGAGCTGAAGACGTAAGGGGAAGCTCGTaGGCAGCCCCGAAGGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: ADHFTETYHAVALHGAEDVRGSS*AAPKDG Trigger: GCCGTCCTTCGGGGCTGCGCACGAGCTTCCCCTTAC...GTCTTCAGCTCCATGCAGAGCTACAGCATGATATGTCTCTGTAAAGTGATCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR GCA 90 bp | CCGGTCCTAGCGAAAACCCGAGCACTGTTTCAAATCTCCCAAGTTCCTTTCTATGGCACGTGGCACACGTaGTGCTTCTTCTTCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVLAKTRALFQISQVPFYGTWHT*CFFFPG Trigger: GCCGGGGAAGAAGAAGCAGCACGTGTGCCACGTGCC...ATAGAAAGGAACTTGGGAGATTTGAAACAGTGCTCGGGTTTTCGCTAGGACCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR CCA 90 bp | CCCAGAAGAAGAAAAGATCAAATGAGACCGGCTCAACGGGGTCTTCCTGTAGTGCTACCTCCCCGCTCCTaGGAACTGGGTCCCTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PRRRKDQMRPAQRGLPVVLPPRS*ELGPYV Trigger: GACATAGGGACCCAGTTCCCAGGAGCGGGGAGGTAG...CACTACAGGAAGACCCCGTTGAGCCGGTCTCATTTGATCTTTTCTTCTTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR GCA 90 bp | GTTCCTTTCTATTCAGTTCAGCAGCATTTCCTATATACAAGGCCAGACCAGGGTAATGCCAGGGGCGAGTaGTTGCCCAGGTCCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPFYSVQQHFLYTRPDQGNARGE*LPRSGE Trigger: CTCCCCGGACCTGGGCAAGCACTCGCCCCTGGCATT...ACCCTGGTCTGGCCTTGTATATAGGAAATGCTGCTGAACTGAATAGAAAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR CCA 90 bp | CCCAGAAGAAGAAAAGATCAAATGAGACCGGCTCAACGGGGTCTTCCTGTAGTGAGCCTGGCTCCATTTTaGGAGGCAGGCAACGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRRRKDQMRPAQRGLPVVSLAPF*EAGNGE Trigger: CTCTCCGTTGCCTGCCTCCCAAAATGGAGCCAGGCT...CACTACAGGAAGACCCCGTTGAGCCGGTCTCATTTGATCTTTTCTTCTTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR CCA 90 bp | CCACCCAGAAGAAGAAAAGATCAAATGAGACCGGCTCAACGGGGTCTTCCTGTAAAGGCCAGACCAGGGTaGTCCCCCGAAACTGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPRRRKDQMRPAQRGLPVKARPG*SPETVG Trigger: ACCTACAGTTTCGGGGGACCACCCTGGTCTGGCCTT...TACAGGAAGACCCCGTTGAGCCGGTCTCATTTGATCTTTTCTTCTTCTGGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR TCA 90 bp | AGCAGCATTTCCTATATACAAGGCCAGACCAGGGTGGTCCCCCGAAACTGTAGGAGCTTCTTATTCTGGTaGGTCTTGACGTGCTTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSISYIQGQTRVVPRNCRSFLFW*VLTCFA Trigger: CGCGAAGCACGTCAAGACTCACCAGAATAAGAAGCT...CCTACAGTTTCGGGGGACCACCCTGGTCTGGCCTTGTATATAGGAAATGCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR CCA 90 bp | GTTCCTTTCTATTCAGTTCAGCAGCATTTCCTATATACAAGGCCAGACCAGGGTCCCGCTCCTGGGAACTaGGTCCCTATGTCCGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPFYSVQQHFLYTRPDQGPAPGN*VPMSEG Trigger: GCCTTCGGACATAGGGACCCAGTTCCCAGGAGCGGG...ACCCTGGTCTGGCCTTGTATATAGGAAATGCTGCTGAACTGAATAGAAAGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR TCA 90 bp | TTTAGAGTTTGGAACCGCCCTGGCGTACGGCAGAGCTCCCAATTACAATCCAAACGGCCTCAGCGACTTTaGGCTTCTTATTCTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FRVWNRPGVRQSSQLQSKRPQRL*ASYSGE Trigger: CTCACCAGAATAAGAAGCTCAAAGTCGCTGAGGCCG...TTTGGATTGTAATTGGGAGCTCTGCCGTACGCCAGGGCGGTTCCAAACTCTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR GCA 90 bp | GTTCCTTTCTATTCAGTTCAGCAGCATTTCCTATATACAAGGCCAGACCAGGGTTCCTGGAGAAAGGCCTaGAGCGAGTCGTTCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPFYSVQQHFLYTRPDQGSWRKA*SESFRR Trigger: CCTCCGGAACGACTCGCTGCAGGCCTTTCTCCAGGA...ACCCTGGTCTGGCCTTGTATATAGGAAATGCTGCTGAACTGAATAGAAAGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR TCA 90 bp | CCGGTCCTAGCGAAAACCCGAGCACTGTTTCAAATCTCCCAAGTTCCTTTCTATTATTCTGGTGAGTCTTaGCGTGCTTCGCGAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVLAKTRALFQISQVPFYYSGES*RASRGG Trigger: ACCACCTCGCGAAGCACGTCAAGACTCACCAGAATA...ATAGAAAGGAACTTGGGAGATTTGAAACAGTGCTCGGGTTTTCGCTAGGACCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR GCA 90 bp | ACAGAGACATATCATGCTGTAGCTCTGCATGGAGCTGAAGACAAAAGCAACATTATCTGGCTCTGGTACTaGGCAAAGTCCGACGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TETYHAVALHGAEDKSNIIWLWY*AKSDGP Trigger: GGGCCCGTCGGACTTTGCGCAGTACCAGAGCCAGAT...AATGTTGCTTTTGTCTTCAGCTCCATGCAGAGCTACAGCATGATATGTCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR TCA 90 bp | GCTGATCACTTTACAGAGACATATCATGCTGTAGCTCTGCATGGAGCTGAAGACAACTGTAGGTCTCCCTaGCGGTGGGAACGGTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ADHFTETYHAVALHGAEDNCRSP*RWERFR Trigger: TCTAAACCGTTCCCACCGTCAGGGAGACCTACAGTT...GTCTTCAGCTCCATGCAGAGCTACAGCATGATATGTCTCTGTAAAGTGATCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR TCA 90 bp | CAGAAGAAGAAAAGATCAAATGAGACCGGCTCAACGGGGTCTTCCTGTAGTGACGAAGAAAAGATCAAATaGGACCGGCTCAACGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QKKKRSNETGSTGSSCSDEEKIK*DRLNGV Trigger: GACCCCGTTGAGCCGGTCTCATTTGATCTTTTCTTC...GTCACTACAGGAAGACCCCGTTGAGCCGGTCTCATTTGATCTTTTCTTCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGATCACTTTACAGAGACATATCATGCTGTAGCTCTGCATGGAGCTGAACGGAAGTTGGAAGCCTaGCTCCATTTTGGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TADHFTETYHAVALHGAERKLEA*LHFGRQ Trigger: CTGCCTCCCAAAATGGAGCCAGGCTTCCAACTTCCG...TTCAGCTCCATGCAGAGCTACAGCATGATATGTCTCTGTAAAGTGATCAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR GCA 90 bp | ATTTATTTTCACGCTGCAACTGCTGATCACTTTACAGAGACATATCATGCTGTATGCAGGTGCGTCTTCTaGGGCGTCAGCCCCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IYFHAATADHFTETYHAVCRCVF*GVSPKL Trigger: CAGCTTGGGGCTGACGCCGCAGAAGACGCACCTGCA...TACAGCATGATATGTCTCTGTAAAGTGATCAGCAGTTGCAGCGTGAAAATAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR GCA 90 bp | CCGGTCCTAGCGAAAACCCGAGCACTGTTTCAAATCTCCCAAGTTCCTTTCTATTACAGAGACATATCATaGTGTAGCTCTGCATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVLAKTRALFQISQVPFYYRDIS*CSSAWS Trigger: GCTCCATGCAGAGCTACAGCATGATATGTCTCTGTA...ATAGAAAGGAACTTGGGAGATTTGAAACAGTGCTCGGGTTTTCGCTAGGACCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR TCA 90 bp | ACTGCTGATCACTTTACAGAGACATATCATGCTGTAGCTCTGCATGGAGCTGAATCACGCTGCAACTGCTaGTCACTTTACAGAGACATA | + |
|
Preference number: 4 (lower is better) Translates to: TADHFTETYHAVALHGAESRCNC*SLYRDI Trigger: TATGTCTCTGTAAAGTGATCAGCAGTTGCAGCGTGA...TTCAGCTCCATGCAGAGCTACAGCATGATATGTCTCTGTAAAGTGATCAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS CCA 90 bp | GGCAGGTGGGCGGCGGGGGCGGTGGCGGCGGCGGAGGCAGCAGGTTaGAGTAGCCTGGCGGCAGCGCGGCCTGCGCCGCGTAGGGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: GRWAAGAVAAAEAAG*SSLAAARPAPRRAR Trigger: ACGTGCCCTACGCGGCGCAGGCCGCGCTGCCGCCAGGCTACTCCAACCTGCTGCCTCCGCCGCCGCCACCGCCCCCGCCGCCCACCTGCC 80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS TCA 90 bp | CTGCGGGATGCTCCACCACGGGAGGTCGTCGGGGGCCGGGTTGGGTaGCAACTGGCGGCAGGTGGGCGGCGGGGGCGGTGGCGGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRDAPPREVVGGRVG*QLAAGGRRGRWRRR Trigger: CCGCCGCCGCCACCGCCCCCGCCGCCCACCTGCCGCCAGTTGTCACCCAACCCGGCCCCCGACGACCTCCCGTGGTGGAGCATCCCGCAG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS CCA 90 bp | AGTCCGGGGGCGCCGCCGCGCCCGGCTGGCCGATGCGGCTACAGGTaGCGGCCAGCAATGCCAGGGGCGAGTGCTTGCCCAGGTCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPGAPPRPAGRCGYR*RPAMPGASACPGPG Trigger: CCCCGGACCTGGGCAAGCACTCGCCCCTGGCATTGCTGGCCGCCACCTGTAGCCGCATCGGCCAGCCGGGCGCGGCGGCGCCCCCGGACT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000375281.4 ENST00000487037.1 |
||
| CDS CCA 90 bp | ATGCTCCACCACGGGAGGTCGTCGGGGGCCGGGTTGGGTGACAACTaGCGGCAGGTGGGCGGCGGGGGCGGTGGCGGCGGCGGAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MLHHGRSSGAGLGDN*RQVGGGGGGGGGGS Trigger: GCTGCCTCCGCCGCCGCCACCGCCCCCGCCGCCCACCTGCCGCCAGTTGTCACCCAACCCGGCCCCCGACGACCTCCCGTGGTGGAGCAT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS CCA 90 bp | ACGGGAGGTCGTCGGGGGCCGGGTTGGGTGACAACTGGCGGCAGGTaGGCGGCGGGGGCGGTGGCGGCGGCGGAGGCAGCAGGTTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TGGRRGPGWVTTGGR*AAGAVAAAEAAGWS Trigger: ACTCCAACCTGCTGCCTCCGCCGCCGCCACCGCCCCCGCCGCCCACCTGCCGCCAGTTGTCACCCAACCCGGCCCCCGACGACCTCCCGT 77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS GCA 90 bp | GAGGACGGCCACCGCGGCCATGGCTACGGCTTGCAGGCCCCTGGCTaGGGAGCGGGACGCCGCCGCCGAGGCATGGACACCCGAAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: EDGHRGHGYGLQAPG*GAGRRRRGMDTRRR Trigger: TCGCCTTCGGGTGTCCATGCCTCGGCGGCGGCGTCCCGCTCCGCAGCCAGGGGCCTGCAAGCCGTAGCCATGGCCGCGGTGGCCGTCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS TCA 90 bp | GTGCGCCGGCATGTCGGCGGTCCACGGGTGGAAGAGCCTGGAGGGTaGGCCCAGCGCGGGGTCGTAGGGCACCTGCAGGAAGTCCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VRRHVGGPRVEEPGG*AQRGVVGHLQEVRG Trigger: CCCCCGGACTTCCTGCAGGTGCCCTACGACCCCGCGCTGGGCTCACCCTCCAGGCTCTTCCACCCGTGGACCGCCGACATGCCGGCGCAC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375281.4 ENST00000487037.1 |
||
| CDS GCA 90 bp | GTCAGCCCCAAGCTGGGATGCGGGGGCGGCAGTGCGCCTGGCGAGTaGGCCGGCATGTCGGCGGTCCACGGGTGGAAGAGCCTGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSPKLGCGGGSAPGE*AGMSAVHGWKSLEG Trigger: ACCCTCCAGGCTCTTCCACCCGTGGACCGCCGACATGCCGGCGCACTCGCCAGGCGCACTGCCGCCCCCGCATCCCAGCTTGGGGCTGAC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS CCA 90 bp | CTGGCGAGTGCGCCGGCATGTCGGCGGTCCACGGGTGGAAGAGCCTaGAGGGTGAGCCCAGCGCGGGGTCGTAGGGCACCTGCAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LASAPACRRSTGGRA*RVSPARGRRAPAGS Trigger: ACTTCCTGCAGGTGCCCTACGACCCCGCGCTGGGCTCACCCTCCAGGCTCTTCCACCCGTGGACCGCCGACATGCCGGCGCACTCGCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375281.4 ENST00000487037.1 |
||
| CDS-3UTR CAA 90 bp | AGCAGCATTTCCTATATACAAGGCCAGACCAGGGTGGTCCCCCGAAACTGTAGGGCCAGGGGCGAGTGCTaGCCCAGGTCCGGGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSISYIQGQTRVVPRNCRARGEC*PRSGEA Trigger: CGCCTCCCCGGACCTGGGCAAGCACTCGCCCCTGGC...CCTACAGTTTCGGGGGACCACCCTGGTCTGGCCTTGTATATAGGAAATGCTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR CAA 90 bp | GTTCCTTTCTATTCAGTTCAGCAGCATTTCCTATATACAAGGCCAGACCAGGGTTCGTCGGGGGCCGGGTaGGGTGACAACTGGCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VPFYSVQQHFLYTRPDQGSSGAG*GDNWRQ Trigger: CTGCCGCCAGTTGTCACCCAACCCGGCCCCCGACGA...ACCCTGGTCTGGCCTTGTATATAGGAAATGCTGCTGAACTGAATAGAAAGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS-3UTR CAA 90 bp | CCGGTCCTAGCGAAAACCCGAGCACTGTTTCAAATCTCCCAAGTTCCTTTCTATCGAAGGCAGCGGAAGTaGGAAGCCTGGCTCCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: PVLAKTRALFQISQVPFYRRQRK*EAWLHF Trigger: AAAATGGAGCCAGGCTTCCAACTTCCGCTGCCTTCG...ATAGAAAGGAACTTGGGAGATTTGAAACAGTGCTCGGGTTTTCGCTAGGACCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS CAA 90 bp | CCCGCCTGCGGGATGCTCCACCACGGGAGGTCGTCGGGGGCCGGGTaGGGTGACAACTGGCGGCAGGTGGGCGGCGGGGGCGGTGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PACGMLHHGRSSGAG*GDNWRQVGGGGGGG Trigger: GCCGCCACCGCCCCCGCCGCCCACCTGCCGCCAGTTGTCACCCAACCCGGCCCCCGACGACCTCCCGTGGTGGAGCATCCCGCAGGCGGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS GCA 72 bp | CACCGCGGCCATGGCTACGGCTTGCAGGCCCCTGGCTaGGGAGCGGGACGCCGCCGCCGAGGCATGGACACC | + |
|
Preference number: 6 (lower is better) Translates to: HRGHGYGLQAPG*GAGRRRRGMDT Trigger: GGTGTCCATGCCTCGGCGGCGGCGTCCCGCTCCGCAGCCAGGGGCCTGCAAGCCGTAGCCATGGCCGCGGTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS CCA 72 bp | GCGCCGCCGCGCCCGGCTGGCCGATGCGGCTACAGGTaGCGGCCAGCAATGCCAGGGGCGAGTGCTTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: APPRPAGRCGYR*RPAMPGASACP Trigger: TGGGCAAGCACTCGCCCCTGGCATTGCTGGCCGCCACCTGTAGCCGCATCGGCCAGCCGGGCGCGGCGGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375281.4 ENST00000487037.1 |
||
| CDS CCA 72 bp | ACCTGCAGGAAGTCCGGGGGCGCCGCCGCGCCCGGCTaGCCGATGCGGCTACAGGTGGCGGCCAGCAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: TCRKSGGAAAPG*PMRLQVAASNA Trigger: GGCATTGCTGGCCGCCACCTGTAGCCGCATCGGCCAGCCGGGCGCGGCGGCGCCCCCGGACTTCCTGCAGGT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000375281.4 ENST00000487037.1 |
||
| CDS CCA 72 bp | CAGCCCCAAGCTGGGATGCGGGGGCGGCAGTGCGCCTaGCGAGTGCGCCGGCATGTCGGCGGTCCACGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QPQAGMRGRQCA*RVRRHVGGPRV Trigger: CACCCGTGGACCGCCGACATGCCGGCGCACTCGCCAGGCGCACTGCCGCCCCCGCATCCCAGCTTGGGGCTG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS CCA 72 bp | GGATGCTCCACCACGGGAGGTCGTCGGGGGCCGGGTTaGGTGACAACTGGCGGCAGGTGGGCGGCGGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GCSTTGGRRGPG*VTTGGRWAAGA Trigger: CGCCCCCGCCGCCCACCTGCCGCCAGTTGTCACCCAACCCGGCCCCCGACGACCTCCCGTGGTGGAGCATCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS CCA 72 bp | GCAGCGAGTCGTTCCGGAGGACGGCCACCGCGGCCATaGCTACGGCTTGCAGGCCCCTGGCTGCGGAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: AASRSGGRPPRP*LRLAGPWLRSG Trigger: CCCGCTCCGCAGCCAGGGGCCTGCAAGCCGTAGCCATGGCCGCGGTGGCCGTCCTCCGGAACGACTCGCTGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375281.4 |
||
| CDS CCA 72 bp | CCTGGCGAGTGCGCCGGCATGTCGGCGGTCCACGGGTaGAAGAGCCTGGAGGGTGAGCCCAGCGCGGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PGECAGMSAVHG*KSLEGEPSAGS Trigger: CGACCCCGCGCTGGGCTCACCCTCCAGGCTCTTCCACCCGTGGACCGCCGACATGCCGGCGCACTCGCCAGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375281.4 ENST00000487037.1 |
||
| CDS CCA 72 bp | CCTGCGCCGCGTAGGGCACGTAGGCGGGCGCGCAGCTaGCGGGCAGAGCCGCCATGCTCGAGGGCAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: PAPRRARRRARS*RAEPPCSRAAS Trigger: AGATGCTGCCCTCGAGCATGGCGGCTCTGCCCGCCAGCTGCGCGCCCGCCTACGTGCCCTACGCGGCGCAGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS GCA 72 bp | CGGCTGGCCGATGCGGCTACAGGTGGCGGCCAGCAATaGCAGGGGCGAGTGCTTGCCCAGGTCCGGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: RLADAATGGGQQ*QGRVLAQVRGG Trigger: GCCTCCCCGGACCTGGGCAAGCACTCGCCCCTGGCATTGCTGGCCGCCACCTGTAGCCGCATCGGCCAGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000375281.4 ENST00000487037.1 |
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| CDS GCA 72 bp | AAGCTGGGATGCGGGGGCGGCAGTGCGCCTGGCGAGTaGGCCGGCATGTCGGCGGTCCACGGGTGGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: KLGCGGGSAPGE*AGMSAVHGWKS Trigger: GCTCTTCCACCCGTGGACCGCCGACATGCCGGCGCACTCGCCAGGCGCACTGCCGCCCCCGCATCCCAGCTT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000375281.4 ENST00000487037.1 |
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| CDS CCA 72 bp | GCGCCGGCATGTCGGCGGTCCACGGGTGGAAGAGCCTaGAGGGTGAGCCCAGCGCGGGGTCGTAGGGCACCT | + |
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Preference number: 6 (lower is better) Translates to: APACRRSTGGRA*RVSPARGRRAP Trigger: AGGTGCCCTACGACCCCGCGCTGGGCTCACCCTCCAGGCTCTTCCACCCGTGGACCGCCGACATGCCGGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375281.4 ENST00000487037.1 |
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| CDS TCA 72 bp | CATGTCGGCGGTCCACGGGTGGAAGAGCCTGGAGGGTaGGCCCAGCGCGGGGTCGTAGGGCACCTGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: HVGGPRVEEPGG*AQRGVVGHLQE Trigger: TTCCTGCAGGTGCCCTACGACCCCGCGCTGGGCTCACCCTCCAGGCTCTTCCACCCGTGGACCGCCGACATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375281.4 ENST00000487037.1 |
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| CDS TCA 72 bp | TGGCGGGCAGAGCCGCCATGCTCGAGGGCAGCATCTTaGCCGGCGAGAACTCGTAGGGGTACGAGGGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: WRAEPPCSRAAS*PARTRRGTRGR Trigger: CCGACCCCTCGTACCCCTACGAGTTCTCGCCGGTCAAGATGCTGCCCTCGAGCATGGCGGCTCTGCCCGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS CCA 72 bp | GGGGCCTTGGTCTGCAGCAGCGCGGCGATCTGGCTCTaGTACTGCGCAAAGTCCGACGGGCCCAACACCAGG | + |
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Preference number: 6 (lower is better) Translates to: GALVCSSAAIWL*YCAKSDGPNTR Trigger: CCTGGTGTTGGGCCCGTCGGACTTTGCGCAGTACCAGAGCCAGATCGCCGCGCTGCTGCAGACCAAGGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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| CDS GCA 72 bp | TTGGTCTGCAGCAGCGCGGCGATCTGGCTCTGGTACTaGGCAAAGTCCGACGGGCCCAACACCAGGCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LVCSSAAIWLWY*AKSDGPNTRPL Trigger: AAGAGGCCTGGTGTTGGGCCCGTCGGACTTTGCGCAGTACCAGAGCCAGATCGCCGCGCTGCTGCAGACCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375281.4 |
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