Pregenerated sensors for SP2-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000264920Ensembl transcript IDs: ENST00000577279.1, ENST00000580459.1, ENST00000582787.2
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCAGCCGGCTACTGCCGAAGAGCAGGTAAAAGCTCCTGCCACACCTaGGCGAGACTGGACTTAGGGCGCAATGTATATGCTATTTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: AAGYCRRAGKSSCHT*ARLDLGRNVYAISG Trigger: CCCAGAAATAGCATATACATTGCGCCCTAAGTCCAGTCTCGCCCAGGTGTGGCAGGAGCTTTTACCTGCTCTTCGGCAGTAGCCGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582787.2 |
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| CDS CCA 90 bp | GTGCCTACCAAGTGCTTTACCTCATCTCAAGAAGGTAAGGGTAAGTaGGGCAGAGGCCAAGCAGTACTTCTCAAACTCAAGCGTGCAATT | + |
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Preference number: 5 (lower is better) Translates to: VPTKCFTSSQEGKGK*GRGQAVLLKLKRAI Trigger: AATTGCACGCTTGAGTTTGAGAAGTACTGCTTGGCCTCTGCCCCACTTACCCTTACCTTCTTGAGATGAGGTAAAGCACTTGGTAGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS CCA 90 bp | GGTGGAGTCCTTGGTTTGACAGTGAAGCAATCTAAACTTGAAAAATaGCCTGGGAACAGAATGTATGGACTATACAAACAAGTCATGCAG | + |
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Preference number: 5 (lower is better) Translates to: GGVLGLTVKQSKLEK*PGNRMYGLYKQVMQ Trigger: CTGCATGACTTGTTTGTATAGTCCATACATTCTGTTCCCAGGCCATTTTTCAAGTTTAGATTGCTTCACTGTCAAACCAAGGACTCCACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS GCA 90 bp | GAGGCTATTAACATTTATTCAGCAATTACTGTGTACCCGGTATTCTaGTCTGCATTTTGTATTATCACACCAACCTTTTCTAGCAGTGTT | + |
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Preference number: 5 (lower is better) Translates to: EAINIYSAITVYPVF*SAFCIITPTFSSSV Trigger: AACACTGCTAGAAAAGGTTGGTGTGATAATACAAAATGCAGAGCAGAATACCGGGTACACAGTAATTGCTGAATAAATGTTAATAGCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS TCA 72 bp | TGGCCGGGAGAGCACAAGCATTTCCAAGCCGCTGCCTaGCCTTCTCCGTCTCTGTTGAAGACAGGGGCCATC | + |
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Preference number: 6 (lower is better) Translates to: WPGEHKHFQAAA*PSPSLLKTGAI Trigger: GATGGCCCCTGTCTTCAACAGAGACGGAGAAGGTCAGGCAGCGGCTTGGAAATGCTTGTGCTCTCCCGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS CCA 72 bp | CTGCCTCCAGACACACCAGGGAGGAGATGTCGCCCCTaGTTAAGGTTGACAGACACAGCCAGAACCACCCAC | + |
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Preference number: 6 (lower is better) Translates to: LPPDTPGRRCRP*LRLTDTARTTH Trigger: GTGGGTGGTTCTGGCTGTGTCTGTCAACCTTAACCAGGGGCGACATCTCCTCCCTGGTGTGTCTGGAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS GCA 72 bp | GAAGTGTCGCGTAAACAACCCCAACTCCCACTATGGTaGCGGACCCCAGTGCCTCACTGTACAAAGTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: EVSRKQPQLPLW*RTPVPHCTKSP Trigger: GGGCGACTTTGTACAGTGAGGCACTGGGGTCCGGCACCATAGTGGGAGTTGGGGTTGTTTACGCGACACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS TCA 72 bp | CGGCCAGGGGAGCCTGCCTTTAGAAAGAGCTTCGGATaGTTCAGATGCACACGTTTGGGACCGTGGGCTATG | + |
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Preference number: 6 (lower is better) Translates to: RPGEPAFRKSFG*FRCTRLGPWAM Trigger: CATAGCCCACGGTCCCAAACGTGTGCATCTGAATCATCCGAAGCTCTTTCTAAAGGCAGGCTCCCCTGGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS CCA 72 bp | TCCTTCTACCACAGCTCAGTCAGGCATGGGGTTGAGTaGCAGCCGGCTACTGCCGAAGAGCAGGTAAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SFYHSSVRHGVE*QPATAEEQVKA Trigger: AGCTTTTACCTGCTCTTCGGCAGTAGCCGGCTGCCACTCAACCCCATGCCTGACTGAGCTGTGGTAGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582787.2 |
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| CDS CCA 72 bp | GTTGATGGCTTTCCACTCACCAGGCATGGGGTTGAGTaGCAGCCGGCTACTGCCGAAGAGCAGGTAAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: VDGFPLTRHGVE*QPATAEEQVKA Trigger: AGCTTTTACCTGCTCTTCGGCAGTAGCCGGCTGCCACTCAACCCCATGCCTGGTGAGTGGAAAGCCATCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS CCA 72 bp | TACTGCCGAAGAGCAGGTAAAAGCTCCTGCCACACCTaGGCGAGACTGGACTTAGGGCGCAATGTATATGCT | + |
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Preference number: 6 (lower is better) Translates to: YCRRAGKSSCHT*ARLDLGRNVYA Trigger: AGCATATACATTGCGCCCTAAGTCCAGTCTCGCCCAGGTGTGGCAGGAGCTTTTACCTGCTCTTCGGCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582787.2 |
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| CDS CCA 72 bp | TTAGAAGTGTCGCGTAAACAACCCCAACTCCCACTATaGTGCCGGACCCCAGTGCCTCACTGTACAAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: LEVSRKQPQLPL*CRTPVPHCTKS Trigger: CGACTTTGTACAGTGAGGCACTGGGGTCCGGCACCATAGTGGGAGTTGGGGTTGTTTACGCGACACTTCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS GCA 72 bp | AGGACAACCCTTACATTTCCTGCTGATCCTCCTCTGTaGTGGCCTCAATCCTTCTACCACAGCTCAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: RTTLTFPADPPL*WPQSFYHSSVR Trigger: CCTGACTGAGCTGTGGTAGAAGGATTGAGGCCAGCACAGAGGAGGATCAGCAGGAAATGTAAGGGTTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582787.2 |
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| CDS CCA 72 bp | GTTTTTACTTGGGCACCCCCAGTGGGAAGGTATCTTTaGGCTAAGGAGTCCTTCTCCACATTTGGCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: VFTWAPPVGRYL*AKESFSTFGCP Trigger: TGGGCAGCCAAATGTGGAGAAGGACTCCTTAGCCCAAAGATACCTTCCCACTGGGGGTGCCCAAGTAAAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS CAA 90 bp | CCCCAGTGGGAAGGTATCTTTGGGCTAAGGAGTCCTTCTCCACATTaGGCTGCCCATTGGAATCACCTGAGGAACTCCTTAATGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: PQWEGIFGLRSPSPH*AAHWNHLRNSLMLM Trigger: CATCAGCATTAAGGAGTTCCTCAGGTGATTCCAATGGGCAGCCAAATGTGGAGAAGGACTCCTTAGCCCAAAGATACCTTCCCACTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS CCA 72 bp | ACAACCCTTACATTTCCTGCTGATCCTCCTCTGTGCTaGCCTCAATCCTTCTACCACAGCTCAGTCAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: TTLTFPADPPLC*PQSFYHSSVRH Trigger: ATGCCTGACTGAGCTGTGGTAGAAGGATTGAGGCCAGCACAGAGGAGGATCAGCAGGAAATGTAAGGGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582787.2 |
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| CDS TCA 72 bp | GACGGATTAGATGAGGACAACCCTTACATTTCCTGCTaGTCCTCCTCTGTGCTGGCCTCAATCCTTCTACCA | + |
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Preference number: 6 (lower is better) Translates to: DGLDEDNPYISC*SSSVLASILLP Trigger: TGGTAGAAGGATTGAGGCCAGCACAGAGGAGGATCAGCAGGAAATGTAAGGGTTGTCCTCATCTAATCCGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582787.2 |
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| CDS CAA 72 bp | GAAGGTATCTTTGGGCTAAGGAGTCCTTCTCCACATTaGGCTGCCCATTGGAATCACCTGAGGAACTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: EGIFGLRSPSPH*AAHWNHLRNSL Trigger: TAAGGAGTTCCTCAGGTGATTCCAATGGGCAGCCAAATGTGGAGAAGGACTCCTTAGCCCAAAGATACCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS CAA 90 bp | CACCCTAATACAGGTGAGTCATGGAACCCGGGTGGAGTCCTTGGTTaGACAGTGAAGCAATCTAAACTTGAAAAATGGCCTGGGAACAGA | + |
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Preference number: 6 (lower is better) Translates to: HPNTGESWNPGGVLG*TVKQSKLEKWPGNR Trigger: TCTGTTCCCAGGCCATTTTTCAAGTTTAGATTGCTTCACTGTCAAACCAAGGACTCCACCCGGGTTCCATGACTCACCTGTATTAGGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS GCA 72 bp | AGCAAAGATAAACCTACCCGCCTAGTGCCTACCAAGTaGTTTACCTCATCTCAAGAAGGTAAGGGTAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: SKDKPTRLVPTK*FTSSQEGKGKW Trigger: CCACTTACCCTTACCTTCTTGAGATGAGGTAAAGCACTTGGTAGGCACTAGGCGGGTAGGTTTATCTTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS GCA 72 bp | TATCTTTGGGCTAAGGAGTCCTTCTCCACATTTGGCTaGCCATTGGAATCACCTGAGGAACTCCTTAATGCT | + |
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Preference number: 6 (lower is better) Translates to: YLWAKESFSTFG*PLESPEELLNA Trigger: AGCATTAAGGAGTTCCTCAGGTGATTCCAATGGGCAGCCAAATGTGGAGAAGGACTCCTTAGCCCAAAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS CCA 72 bp | AAGTGCTTTACCTCATCTCAAGAAGGTAAGGGTAAGTaGGGCAGAGGCCAAGCAGTACTTCTCAAACTCAAG | + |
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Preference number: 6 (lower is better) Translates to: KCFTSSQEGKGK*GRGQAVLLKLK Trigger: CTTGAGTTTGAGAAGTACTGCTTGGCCTCTGCCCCACTTACCCTTACCTTCTTGAGATGAGGTAAAGCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS CAA 72 bp | ACAGGTGAGTCATGGAACCCGGGTGGAGTCCTTGGTTaGACAGTGAAGCAATCTAAACTTGAAAAATGGCCT | + |
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Preference number: 6 (lower is better) Translates to: TGESWNPGGVLG*TVKQSKLEKWP Trigger: AGGCCATTTTTCAAGTTTAGATTGCTTCACTGTCAAACCAAGGACTCCACCCGGGTTCCATGACTCACCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS TCA 72 bp | GTAGGTGTGATTAACCTCGTTTTACTGATGAGGACATaGAGCTCAGGGAGTTTCGGTACCCTGCCTAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: VGVINLVLLMRT*SSGSFGTLPKL Trigger: TAACTTAGGCAGGGTACCGAAACTCCCTGAGCTTCATGTCCTCATCAGTAAAACGAGGTTAATCACACCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS CCA 72 bp | AAAAAGCGTAAGTGTTTAGGAACCTGGAATCTTTCCTaGAGGGAAAAGGGTAGGATTTGTAGGAAGGGAACG | + |
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Preference number: 6 (lower is better) Translates to: KKRKCLGTWNLS*REKGRICRKGT Trigger: CGTTCCCTTCCTACAAATCCTACCCTTTTCCCTCCAGGAAAGATTCCAGGTTCCTAAACACTTACGCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS TCA 72 bp | GTGTTTGTGAAGGAAGCTCTAAGACTCCAATGGGCCTaGCAAAAGTATAACGGGGTCTTCTTCTTAGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: VFVKEALRLQWA*QKYNGVFFLES Trigger: ACTTTCTAAGAAGAAGACCCCGTTATACTTTTGTCAGGCCCATTGGAGTCTTAGAGCTTCCTTCACAAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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| CDS CAA 90 bp | CGTGCACAACATGCAGATTTGTTACATAGGTATACATGTGCCATGTaGGTTTGCTGCACCCATCAACTTGTCATTTACATTAGGTATTTC | + |
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Preference number: 6 (lower is better) Translates to: RAQHADLLHRYTCAM*VCCTHQLVIYIRYF Trigger: GAAATACCTAATGTAAATGACAAGTTGATGGGTGCAGCAAACCAACATGGCACATGTATACCTATGTAACAAATCTGCATGTTGTGCACG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577279.1 ENST00000582787.2 |
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| CDS CAA 72 bp | CATGCAGATTTGTTACATAGGTATACATGTGCCATGTaGGTTTGCTGCACCCATCAACTTGTCATTTACATT | + |
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Preference number: 6 (lower is better) Translates to: HADLLHRYTCAM*VCCTHQLVIYI Trigger: AATGTAAATGACAAGTTGATGGGTGCAGCAAACCAACATGGCACATGTATACCTATGTAACAAATCTGCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577279.1 ENST00000582787.2 |
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| CDS GCA 72 bp | AACATTTATTCAGCAATTACTGTGTACCCGGTATTCTaGTCTGCATTTTGTATTATCACACCAACCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: NIYSAITVYPVF*SAFCIITPTFS Trigger: AGAAAAGGTTGGTGTGATAATACAAAATGCAGAGCAGAATACCGGGTACACAGTAATTGCTGAATAAATGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580459.1 |
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