RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SP140 (Homo sapiens)

Ensembl gene IDs: ENSG00000079263

Ensembl transcript IDs: ENST00000343805.10, ENST00000373645.3, ENST00000392045.8, ENST00000417495.7, ENST00000420434.7, ENST00000441657.1, ENST00000456542.5, ENST00000473711.1, ENST00000538494.1, ENST00000544128.5

Found 275 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACCACCGTGAGCTATCGAAAGAATGTGGGCTTAGGGCTTCTGCATaGAGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTC +
Preference number: 1 (lower is better)
Translates to: HHRELSKECGLRASA*RWPRKWESEGKKCV
Trigger: GACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGCAGAAGCCCTAAGCCCACATTCTTTCGATAGCTCACGGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR GCA 90 bp CAGAATCCACTTCAACTTCTTTCTCCAGAGTCAGCTCTCACACCCTaGCTCCCACAGTCTGCAATTCAACCACATGGTTCGGAAAGGCCC +
Preference number: 1 (lower is better)
Translates to: QNPLQLLSPESALTP*LPQSAIQPHGSERP
Trigger: GGGCCTTTCCGAACCATGTGGTTGAATTGCAGACTGTGGGAGGCAGGGTGTGAGAGCTGACTCTGGAGAAAGAAGTTGAAGTGGATTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373645.3
3UTR CCA 90 bp CGTGAGCTATCGAAAGAATGTGGGCTTAGGGCTTCTGCATGGAGGTaGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAAT +
Preference number: 1 (lower is better)
Translates to: RELSKECGLRASAWR*PRKWESEGKKCVLN
Trigger: ATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGCAGAAGCCCTAAGCCCACATTCTTTCGATAGCTCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR CCA 90 bp AAAGAATGTGGGCTTAGGGCTTCTGCATGGAGGTGGCCACGGAAGTaGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTG +
Preference number: 1 (lower is better)
Translates to: KECGLRASAWRWPRK*ESEGKKCVLNKAWL
Trigger: CAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGCAGAAGCCCTAAGCCCACATTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR TCA 90 bp GTGATCCCACTTACTCTTCCCTGGCTGATGAGATACTTGGGGTTGTaGTTCATGATGATTGAATTTCCTTTTGAGGATTTGTCTTTGGGC +
Preference number: 1 (lower is better)
Translates to: VIPLTLPWLMRYLGL*FMMIEFPFEDLSLG
Trigger: GCCCAAAGACAAATCCTCAAAAGGAAATTCAATCATCATGAATCACAACCCCAAGTATCTCATCAGCCAGGGAAGAGTAAGTGGGATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR CCA 90 bp CGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTaGCTGGTTTTCAGACAAAAGGTCTTCTGGGTAATAAATGTTGTC +
Preference number: 1 (lower is better)
Translates to: RKWESEGKKCVLNKA*LVFRQKVFWVINVV
Trigger: GACAACATTTATTACCCAGAAGACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR GCA 90 bp TTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGGCCCCTCCCTGCATGTaGTGTGCCCAAGTGACCTCA +
Preference number: 2 (lower is better)
Translates to: LSGAALRRRGKSLYGMVSAPPCM*CAQVTS
Trigger: TGAGGTCACTTGGGCACAGCACATGCAGGGAGGGGC...CGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR GCA 90 bp AGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTGCCCCTCCCTGCATGTaGTGTGCCCAAGTGACCTCA +
Preference number: 2 (lower is better)
Translates to: RWPRKWESEGKKCVLNKAAPPCM*CAQVTS
Trigger: TGAGGTCACTTGGGCACAGCACATGCAGGGAGGGGC...AGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR TCA 90 bp GAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAACAAGTGACCTCATTTTaGAGTCAGTGGCAAACCAGC +
Preference number: 2 (lower is better)
Translates to: EQPSGEEVRACMGWCRCQQVTSF*SQWQTS
Trigger: GCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTG...TTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR TCA 90 bp GAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAATGTGCTGTGCCCAAGTaGCCTCATTTTGAAGTCAGT +
Preference number: 2 (lower is better)
Translates to: EQPSGEEVRACMGWCRCQCAVPK*PHFEVS
Trigger: ACTGACTTCAAAATGAGGTCACTTGGGCACAGCACA...TTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR GCA 90 bp TTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGTCCCTGCATGTGCTGTaGCCAAGTGACCTCATTTTG +
Preference number: 2 (lower is better)
Translates to: LSGAALRRRGKSLYGMVSSLHVL*PSDLIL
Trigger: CAAAATGAGGTCACTTGGGCACAGCACATGCAGGGA...CGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR TCA 90 bp GCATGGAGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATTGTGCTGTGCCCAAGTaGCCTCATTTTGAAGTCAGT +
Preference number: 2 (lower is better)
Translates to: AWRWPRKWESEGKKCVLNCAVPK*PHFEVS
Trigger: ACTGACTTCAAAATGAGGTCACTTGGGCACAGCACA...ATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR CCA 90 bp TTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGTTGAGGATTTGTCTTTaGGCAGATGAAGGAGGCTCA +
Preference number: 2 (lower is better)
Translates to: LSGAALRRRGKSLYGMVSLRICL*ADEGGS
Trigger: TGAGCCTCCTTCATCTGCCCAAAGACAAATCCTCAA...CGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR TCA 90 bp CTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTCAAGTGACCTCATTTTaGAGTCAGTGGCAAACCAGC +
Preference number: 2 (lower is better)
Translates to: LGNKCCLEQPSGEEVRACQVTSF*SQWQTS
Trigger: GCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTG...ACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR TCA 90 bp AGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTTGTCTTTGGGCAGATaGAGGAGGCTCAGAGAAAAG +
Preference number: 2 (lower is better)
Translates to: RWPRKWESEGKKCVLNKALSLGR*RRLREK
Trigger: CTTTTCTCTGAGCCTCCTTCATCTGCCCAAAGACAA...AGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR GCA 90 bp CGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTCCCTGCATGTGCTGTaGCCAAGTGACCTCATTTTG +
Preference number: 2 (lower is better)
Translates to: RKWESEGKKCVLNKAWLVSLHVL*PSDLIL
Trigger: CAAAATGAGGTCACTTGGGCACAGCACATGCAGGGA...AACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR CCA 90 bp CGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTCCACTTACTCTTCCCTaGCTGATGAGATACTTGGGG +
Preference number: 2 (lower is better)
Translates to: RKWESEGKKCVLNKAWLVPLTLP*LMRYLG
Trigger: CCCCAAGTATCTCATCAGCCAGGGAAGAGTAAGTGG...AACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR CCA 90 bp ACAAAAGGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGAGAGCCTGTATGGGATaGTGTCGCTGCCAACATCCT +
Preference number: 2 (lower is better)
Translates to: TKGLLGNKCCLEQPSGEERACMG*CRCQHP
Trigger: AGGATGTTGGCAGCGACACCATCCCATACAGGCTCT...CTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR GCA 90 bp ACAAAAGGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGTCCCTGCATGTGCTGTaGCCAAGTGACCTCATTTTG +
Preference number: 2 (lower is better)
Translates to: TKGLLGNKCCLEQPSGEESLHVL*PSDLIL
Trigger: CAAAATGAGGTCACTTGGGCACAGCACATGCAGGGA...CTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACCTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR CCA 90 bp ACAAAAGGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGCCACTTACTCTTCCCTaGCTGATGAGATACTTGGGG +
Preference number: 2 (lower is better)
Translates to: TKGLLGNKCCLEQPSGEEPLTLP*LMRYLG
Trigger: CCCCAAGTATCTCATCAGCCAGGGAAGAGTAAGTGG...CTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACCTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR TCA 90 bp GAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAAAGGTCCAAGTGACCTCATTTTaGAGTCAGTGGCAAACCAGC +
Preference number: 2 (lower is better)
Translates to: EGKKCVLNKAWLVFRQKVQVTSF*SQWQTS
Trigger: GCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTG...GACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR CCA 90 bp GAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAAAGGTCTTGAGGATTTGTCTTTaGGCAGATGAAGGAGGCTCA +
Preference number: 2 (lower is better)
Translates to: EGKKCVLNKAWLVFRQKVLRICL*ADEGGS
Trigger: TGAGCCTCCTTCATCTGCCCAAAGACAAATCCTCAA...GACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR CCA 72 bp GGGCTTAGGGCTTCTGCATGGAGGTGGCCACGGAAGTaGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAA +
Preference number: 3 (lower is better)
Translates to: GLRASAWRWPRK*ESEGKKCVLNK
Trigger: TTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGCAGAAGCCCTAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR CAA 90 bp CGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTCCAAGTGACCTCATTTaGAAGTCAGTGGCAAACCAG +
Preference number: 3 (lower is better)
Translates to: RKWESEGKKCVLNKAWLVPSDLI*KSVANQ
Trigger: CTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGG...AACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR CAA 90 bp GGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGACCAAGTGACCTCATTTaGAAGTCAGTGGCAAACCAG +
Preference number: 3 (lower is better)
Translates to: GLLGNKCCLEQPSGEEVRPSDLI*KSVANQ
Trigger: CTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGG...TCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR-3UTR CAA 90 bp ACAAAAGGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGCCAAGTGACCTCATTTaGAAGTCAGTGGCAAACCAG +
Preference number: 3 (lower is better)
Translates to: TKGLLGNKCCLEQPSGEEPSDLI*KSVANQ
Trigger: CTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGG...CTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR CCA 72 bp GAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTaGCTGGTTTTCAGACAAAAGGTCTTCTGGGTAATA +
Preference number: 3 (lower is better)
Translates to: ESEGKKCVLNKA*LVFRQKVFWVI
Trigger: TATTACCCAGAAGACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GCTCTCACACCCTGCCTCCCACAGTCTGCAATTCAACCACATGGTTCGGAAAGGTCTCCACTTGCCATCTaGCCCTGCTGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ALTPCLPQSAIQPHGSERSPLAI*PCWPCW
Trigger: CCAGCAGGGCCAGCAGGGGCAGATGGCAAGTGGAGA...CCTTTCCGAACCATGTGGTTGAATTGCAGACTGTGGGAGGCAGGGTGTGAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR GCA 90 bp CCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAACATCCTTCTCCACTTGCCATCTaGCCCTGCTGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSGEEVRACMGWCRCQHPSPLAI*PCWPCW
Trigger: CCAGCAGGGCCAGCAGGGGCAGATGGCAAGTGGAGA...AGGATGTTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAAGGTGAAGCTGCCAACTaGCCCTCGGTGCTCAGTCAA +
Preference number: 4 (lower is better)
Translates to: EQPSGEEVRACMGWCRCQGEAAN*PSVLSQ
Trigger: TTGACTGAGCACCGAGGGGCAGTTGGCAGCTTCACC...TTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GATGAAGGAGGCTCAGAGAAAAGCCCCTCCCTGCATGTGCTGTGCCCAAGTGACGGTGAAGCTGCCAACTaGCCCTCGGTGCTCAGTCAA +
Preference number: 4 (lower is better)
Translates to: DEGGSEKSPSLHVLCPSDGEAAN*PSVLSQ
Trigger: TTGACTGAGCACCGAGGGGCAGTTGGCAGCTTCACC...GTCACTTGGGCACAGCACATGCAGGGAGGGGCTTTTCTCTGAGCCTCCTTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GATGAAGGAGGCTCAGAGAAAAGCCCCTCCCTGCATGTGCTGTGCCCAAGTGACATTGCTGTCTCCACTTaGCATCTGCCCCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: DEGGSEKSPSLHVLCPSDIAVST*HLPLLA
Trigger: GGCCAGCAGGGGCAGATGGCAAGTGGAGACAGCAAT...GTCACTTGGGCACAGCACATGCAGGGAGGGGCTTTTCTCTGAGCCTCCTTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp CCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAACATCCTTCCTTCCTGCAGCTCTaGGGTGAAGCTGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: PSGEEVRACMGWCRCQHPSFLQL*GEAANC
Trigger: GCAGTTGGCAGCTTCACCTCAGAGCTGCAGGAAGGA...AGGATGTTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAATCTCCCCTGGTGCTGTaGTGTATGTCCTTGCCGCAT +
Preference number: 4 (lower is better)
Translates to: EQPSGEEVRACMGWCRCQSPLVL*CMSLPH
Trigger: ATGCGGCAAGGACATACAGCACAGCACCAGGGGAGA...TTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR TCA 90 bp GCATGGAGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATTCCTTCCTGCAGCTCTaGGGTGAAGCTGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: AWRWPRKWESEGKKCVLNSFLQL*GEAANC
Trigger: GCAGTTGGCAGCTTCACCTCAGAGCTGCAGGAAGGA...ATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp GAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAAGAGCTCAAGGCTTCCTaGGGCACTGCTATATCATCC +
Preference number: 4 (lower is better)
Translates to: EQPSGEEVRACMGWCRCQELKAS*GTAISS
Trigger: GGATGATATAGCAGTGCCTCAGGAAGCCTTGAGCTC...TTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAACGATTCGATTTTCACTaGCCCGTTCCTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EQPSGEEVRACMGWCRCQRFDFH*PVPSCS
Trigger: GCTGCAGGAAGGAACGGGGCAGTGAAAATCGAATCG...TTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp CTTTCTCCAGAGTCAGCTCTCACACCCTGCCTCCCACAGTCTGCAATTCAACCAATTGCTGTCTCCACTTaGCATCTGCCCCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LSPESALTPCLPQSAIQPIAVST*HLPLLA
Trigger: GGCCAGCAGGGGCAGATGGCAAGTGGAGACAGCAAT...TGGTTGAATTGCAGACTGTGGGAGGCAGGGTGTGAGAGCTGACTCTGGAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR CCA 90 bp CTGCATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGACCTGGCTCACACCTTaGCGAGGAGCTCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LHVLCPSDLILKSVANQRTWLTP*RGAQGF
Trigger: GAAGCCTTGAGCTCCTCGCCAAGGTGTGAGCCAGGT...CCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp CTTCTTTCTCCAGAGTCAGCTCTCACACCCTGCCTCCCACAGTCTGCAATTCAATCCTTCCTGCAGCTCTaGGGTGAAGCTGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: LLSPESALTPCLPQSAIQSFLQL*GEAANC
Trigger: GCAGTTGGCAGCTTCACCTCAGAGCTGCAGGAAGGA...TTGAATTGCAGACTGTGGGAGGCAGGGTGTGAGAGCTGACTCTGGAGAAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR TCA 90 bp CCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAACATCCTGAGCTCAAGGCTTCCTaGGGCACTGCTATATCATCC +
Preference number: 4 (lower is better)
Translates to: PSGEEVRACMGWCRCQHPELKAS*GTAISS
Trigger: GGATGATATAGCAGTGCCTCAGGAAGCCTTGAGCTC...AGGATGTTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp GATGAAGGAGGCTCAGAGAAAAGCCCCTCCCTGCATGTGCTGTGCCCAAGTGACATTGTGCCACACGCTTaGTCACTTTCCGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: DEGGSEKSPSLHVLCPSDIVPHA*SLSVLA
Trigger: AGCAAGGACGGAAAGTGATCAAGCGTGTGGCACAAT...GTCACTTGGGCACAGCACATGCAGGGAGGGGCTTTTCTCTGAGCCTCCTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp TCCCTGCATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGGGTGAAGCTGCCAACTaGCCCTCGGTGCTCAGTCAA +
Preference number: 4 (lower is better)
Translates to: SLHVLCPSDLILKSVANQGEAAN*PSVLSQ
Trigger: TTGACTGAGCACCGAGGGGCAGTTGGCAGCTTCACC...CTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATGCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGATCTCCACTTGCCATCTaGCCCTGCTGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLLGNKCCLEQPSGEEVRSPLAI*PCWPCW
Trigger: CCAGCAGGGCCAGCAGGGGCAGATGGCAAGTGGAGA...TCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAATCCCTGCATGTGCTGTaGCCAAGTGACCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: EQPSGEEVRACMGWCRCQSLHVL*PSDLIL
Trigger: CAAAATGAGGTCACTTGGGCACAGCACATGCAGGGA...TTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp GATGAAGGAGGCTCAGAGAAAAGCCCCTCCCTGCATGTGCTGTGCCCAAGTGACCCACTTACTCTTCCCTaGCTGATGAGATACTTGGGG +
Preference number: 4 (lower is better)
Translates to: DEGGSEKSPSLHVLCPSDPLTLP*LMRYLG
Trigger: CCCCAAGTATCTCATCAGCCAGGGAAGAGTAAGTGG...GTCACTTGGGCACAGCACATGCAGGGAGGGGCTTTTCTCTGAGCCTCCTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp TTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGAGAGCCTGTATGGGATaGTGTCGCTGCCAACATCCT +
Preference number: 4 (lower is better)
Translates to: LSGAALRRRGKSLYGMVSRACMG*CRCQHP
Trigger: AGGATGTTGGCAGCGACACCATCCCATACAGGCTCT...CGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp GATGAAGGAGGCTCAGAGAAAAGCCCCTCCCTGCATGTGCTGTGCCCAAGTGACTTGTCTTTGGGCAGATaGAGGAGGCTCAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: DEGGSEKSPSLHVLCPSDLSLGR*RRLREK
Trigger: CTTTTCTCTGAGCCTCCTTCATCTGCCCAAAGACAA...GTCACTTGGGCACAGCACATGCAGGGAGGGGCTTTTCTCTGAGCCTCCTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp CCTCCCACAGTCTGCAATTCAACCACATGGTTCGGAAAGGCCCCCACCAACCCCTTTGGAGAAACAAGTTaGCACAGGACTGCACTGGAT +
Preference number: 4 (lower is better)
Translates to: PPTVCNSTTWFGKAPTNPFGETS*HRTALD
Trigger: ATCCAGTGCAGTCCTGTGTCAACTTGTTTCTCCAAA...GGGGTTGGTGGGGGCCTTTCCGAACCATGTGGTTGAATTGCAGACTGTGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR TCA 90 bp GCATGGAGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATCCGAGAAGAGTCAGATaGTGGACACTCATGCACCAC +
Preference number: 4 (lower is better)
Translates to: AWRWPRKWESEGKKCVLNPRRVR*WTLMHH
Trigger: GTGGTGCATGAGTGTCCATCATCTGACTCTTCTCGG...ATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp ACAAAAGGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGTCTCCACTTGCCATCTaGCCCTGCTGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TKGLLGNKCCLEQPSGEESPLAI*PCWPCW
Trigger: CCAGCAGGGCCAGCAGGGGCAGATGGCAAGTGGAGA...CTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACCTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp CCCACAGTCTGCAATTCAACCACATGGTTCGGAAAGGCCCCCACCAACCCCCTTTACGTTCTGGATCTCTaGGACCATCCTGAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: PTVCNSTTWFGKAPTNPLYVLDL*DHPEVE
Trigger: CTCAACTTCAGGATGGTCGCAGAGATCCAGAACGTA...AAGGGGGTTGGTGGGGGCCTTTCCGAACCATGTGGTTGAATTGCAGACTGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR GCA 90 bp GATGAAGGAGGCTCAGAGAAAAGCCCCTCCCTGCATGTGCTGTGCCCAAGTGACTGTGCTGTATGTCCTTaGCGCATCTATCATCCCGTT +
Preference number: 4 (lower is better)
Translates to: DEGGSEKSPSLHVLCPSDCAVCP*RIYHPV
Trigger: AACGGGATGATAGATGCGGCAAGGACATACAGCACA...GTCACTTGGGCACAGCACATGCAGGGAGGGGCTTTTCTCTGAGCCTCCTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR GCA 90 bp CGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTGCCCCTCCCTGCATGTaGTGTGCCCAAGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: RKWESEGKKCVLNKAWLVAPPCM*CAQVTS
Trigger: TGAGGTCACTTGGGCACAGCACATGCAGGGAGGGGC...AACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp TTTCTCCAGAGTCAGCTCTCACACCCTGCCTCCCACAGTCTGCAATTCAACCACTCAGCTCTCACACCCTaGCTCCCACAGTCTGCAATT +
Preference number: 4 (lower is better)
Translates to: FLQSQLSHPASHSLQFNHSALTP*LPQSAI
Trigger: AATTGCAGACTGTGGGAGGCAGGGTGTGAGAGCTGA...GTGGTTGAATTGCAGACTGTGGGAGGCAGGGTGTGAGAGCTGACTCTGGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR GCA 90 bp GCATGGAGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATCCAACTGCCCCTCGGTaGTCAGTCAAAGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: AWRWPRKWESEGKKCVLNPTAPR*SVKEEK
Trigger: CTTTTCCTCTTTGACTGAGCACCGAGGGGCAGTTGG...ATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392045.8
ENST00000420434.7
CDS-3UTR CCA 90 bp CTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTACCTGGCTCACACCTTaGCGAGGAGCTCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LGNKCCLEQPSGEEVRACTWLTP*RGAQGF
Trigger: GAAGCCTTGAGCTCCTCGCCAAGGTGTGAGCCAGGT...ACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp GCATGGAGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAGGTGGCCACGGAAGTaGGAAAGTGAAGGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: AWRWPRKWESEGKKCVLNRWPRK*ESEGKK
Trigger: CTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCT...ATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
3UTR CAA 72 bp CCCTCCCTGCATGTGCTGTGCCCAAGTGACCTCATTTaGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGG +
Preference number: 4 (lower is better)
Translates to: PSLHVLCPSDLI*KSVANQRHILG
Trigger: CCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATGCAGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp GCATGGAGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATATTGTGCCACACGCTTaGTCACTTTCCGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: AWRWPRKWESEGKKCVLNIVPHA*SLSVLA
Trigger: AGCAAGGACGGAAAGTGATCAAGCGTGTGGCACAAT...ATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp CCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAACATCCTTTGTCTTTGGGCAGATaGAGGAGGCTCAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: PSGEEVRACMGWCRCQHPLSLGR*RRLREK
Trigger: CTTTTCTCTGAGCCTCCTTCATCTGCCCAAAGACAA...AGGATGTTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp AGTCAGCTCTCACACCCTGCCTCCCACAGTCTGCAATTCAACCACATGGTTCGGGCTAGGCTCTCTTCGTaGCTTCTCCAGTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SQLSHPASHSLQFNHMVRARLSS*LLQSLF
Trigger: AAACAAAGACTGGAGAAGTCACGAAGAGAGCCTAGC...CCGAACCATGTGGTTGAATTGCAGACTGTGGGAGGCAGGGTGTGAGAGCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR TCA 90 bp TTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGGAGTCCCACAAAATATaGGACTCCGAGAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LSGAALRRRGKSLYGMVSESHKI*DSEKSQ
Trigger: CTGACTCTTCTCGGAGTCTCATATTTTGTGGGACTC...CGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp TCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTTTCAGCGGTGAAGCTGCCAACTaGCCCTCGGTGCTCAGTCAA +
Preference number: 4 (lower is better)
Translates to: SVANQRHILGCHLLNAFSGEAAN*PSVLSQ
Trigger: TTGACTGAGCACCGAGGGGCAGTTGGCAGCTTCACC...GCTGAAAGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAATTGCTGTCTCCACTTaGCATCTGCCCCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GLLGNKCCLEQPSGEEVRIAVST*HLPLLA
Trigger: GGCCAGCAGGGGCAGATGGCAAGTGGAGACAGCAAT...TCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp CCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAACATCCTTACGTTCTGGATCTCTaGGACCATCCTGAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: PSGEEVRACMGWCRCQHPYVLDL*DHPEVE
Trigger: CTCAACTTCAGGATGGTCGCAGAGATCCAGAACGTA...AGGATGTTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp TTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGTGTGCTGTATGTCCTTaGCGCATCTATCATCCCGTT +
Preference number: 4 (lower is better)
Translates to: LSGAALRRRGKSLYGMVSCAVCP*RIYHPV
Trigger: AACGGGATGATAGATGCGGCAAGGACATACAGCACA...CGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR GCA 90 bp CTGCATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCTGAACAGTCATCACTaGCCTCTTCTCCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: LHVLCPSDLILKSVANQRLNSHH*PLLLHL
Trigger: CAGGTGAAGGAGAAGAGGGCAGTGATGACTGTTCAG...CCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR GCA 90 bp GCATGGAGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATCTGAACAGTCATCACTaGCCTCTTCTCCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: AWRWPRKWESEGKKCVLNLNSHH*PLLLHL
Trigger: CAGGTGAAGGAGAAGAGGGCAGTGATGACTGTTCAG...ATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392045.8
ENST00000420434.7
CDS-3UTR GCA 90 bp CATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATCACTTTCCGTCCTTaGTTCTGGGCTTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: HVLCPSDLILKSVANQRHITFRP*FWASWH
Trigger: GTGCCAGGAAGCCCAGAAGCAAGGACGGAAAGTGAT...ATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp CCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGCCCCTCCCTGCATGTaGTGTGCCCAAGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: PHFEVSGKPAAYFRVPFAAPPCM*CAQVTS
Trigger: TGAGGTCACTTGGGCACAGCACATGCAGGGAGGGGC...AGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp CCCACAGTCTGCAATTCAACCACATGGTTCGGAAAGGCCCCCACCAACCCCCTTTTCATAGCTTTCACATaGAGCTCCTCCTCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: PTVCNSTTWFGKAPTNPLFIAFT*SSSSVY
Trigger: GTACACTGAGGAGGAGCTGCATGTGAAAGCTATGAA...AAGGGGGTTGGTGGGGGCCTTTCCGAACCATGTGGTTGAATTGCAGACTGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR GCA 90 bp CATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATCCAACTGCCCCTCGGTaGTCAGTCAAAGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: HVLCPSDLILKSVANQRHPTAPR*SVKEEK
Trigger: CTTTTCCTCTTTGACTGAGCACCGAGGGGCAGTTGG...ATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392045.8
ENST00000420434.7
CDS-3UTR CCA 90 bp CGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTACCTGGCTCACACCTTaGCGAGGAGCTCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RKWESEGKKCVLNKAWLVTWLTP*RGAQGF
Trigger: GAAGCCTTGAGCTCCTCGCCAAGGTGTGAGCCAGGT...AACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp GAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAATTGAGGATTTGTCTTTaGGCAGATGAAGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: EQPSGEEVRACMGWCRCQLRICL*ADEGGS
Trigger: TGAGCCTCCTTCATCTGCCCAAAGACAAATCCTCAA...TTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp AGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTGAGCTCAAGGCTTCCTaGGGCACTGCTATATCATCC +
Preference number: 4 (lower is better)
Translates to: RWPRKWESEGKKCVLNKAELKAS*GTAISS
Trigger: GGATGATATAGCAGTGCCTCAGGAAGCCTTGAGCTC...AGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp CATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTGTGCCACACGCTTaGTCACTTTCCGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: HVLCPSDLILKSVANQRHIVPHA*SLSVLA
Trigger: AGCAAGGACGGAAAGTGATCAAGCGTGTGGCACAAT...ATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp TTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTATTGCTGTCTCCACTTaGCATCTGCCCCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LKSVANQRHILGCHLLNAIAVST*HLPLLA
Trigger: GGCCAGCAGGGGCAGATGGCAAGTGGAGACAGCAAT...AGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp CCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAACATCCTGGCTTCCTGAGGCACTaGTATATCATCCATTTCATG +
Preference number: 4 (lower is better)
Translates to: PSGEEVRACMGWCRCQHPGFLRH*YIIHFM
Trigger: CATGAAATGGATGATATAGCAGTGCCTCAGGAAGCC...AGGATGTTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGATCTCCCCTGGTGCTGTaGTGTATGTCCTTGCCGCAT +
Preference number: 4 (lower is better)
Translates to: GLLGNKCCLEQPSGEEVRSPLVL*CMSLPH
Trigger: ATGCGGCAAGGACATACAGCACAGCACCAGGGGAGA...TCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR GCA 90 bp TTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCCACAGTATCCATTGTaGCACACGCTTGATCACTTT +
Preference number: 4 (lower is better)
Translates to: LSGAALRRRGKSLYGMVSPQYPL*HTLDHF
Trigger: AAAGTGATCAAGCGTGTGGCACAATGGATACTGTGG...CGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp AGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTCCGAACAGTCATCACTaGCCTCTTCTCCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: RWPRKWESEGKKCVLNKAPNSHH*PLLLHL
Trigger: CAGGTGAAGGAGAAGAGGGCAGTGATGACTGTTCGG...AGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392045.8
ENST00000417495.7
CDS-3UTR CCA 90 bp TTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCATCACTCTTGTCACTaGGACCAGGTTTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: LSGAALRRRGKSLYGMVSHHSCH*DQVSKS
Trigger: GCTTTTAGAAACCTGGTCCCAGTGACAAGAGTGATG...CGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp CCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAACATCCTCCTGTAACGTATTCTTaGAGGATCAGGCAGAAATCC +
Preference number: 4 (lower is better)
Translates to: PSGEEVRACMGWCRCQHPPVTYS*RIRQKS
Trigger: GGATTTCTGCCTGATCCTCCAAGAATACGTTACAGG...AGGATGTTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp TTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGGTAATAAATGTTGTCTaGAGCAGCCCTCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LSGAALRRRGKSLYGMVSVINVV*SSPQEK
Trigger: CTTCTCCTGAGGGCTGCTCCAGACAACATTTATTAC...CGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp GAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAAAGGTCTCCTTCCTGCAGCTCTaGGGTGAAGCTGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: EGKKCVLNKAWLVFRQKVSFLQL*GEAANC
Trigger: GCAGTTGGCAGCTTCACCTCAGAGCTGCAGGAAGGA...GACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp CGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTGAGCTCAAGGCTTCCTaGGGCACTGCTATATCATCC +
Preference number: 4 (lower is better)
Translates to: RKWESEGKKCVLNKAWLVELKAS*GTAISS
Trigger: GGATGATATAGCAGTGCCTCAGGAAGCCTTGAGCTC...AACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp CATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATCAAGTGACCTCATTTTaGAGTCAGTGGCAAACCAGC +
Preference number: 4 (lower is better)
Translates to: HVLCPSDLILKSVANQRHQVTSF*SQWQTS
Trigger: GCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTG...ATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp TCCCTGCATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCAAGTGACCTCATTTTaGAGTCAGTGGCAAACCAGC +
Preference number: 4 (lower is better)
Translates to: SLHVLCPSDLILKSVANQQVTSF*SQWQTS
Trigger: GCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTG...CTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATGCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp CATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATTTGTCTTTGGGCAGATaGAGGAGGCTCAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: HVLCPSDLILKSVANQRHLSLGR*RRLREK
Trigger: CTTTTCTCTGAGCCTCCTTCATCTGCCCAAAGACAA...ATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp TCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTTTCAGCCCGAGAAGAGTCAGATaGTGGACACTCATGCACCAC +
Preference number: 4 (lower is better)
Translates to: SVANQRHILGCHLLNAFSPRRVR*WTLMHH
Trigger: GTGGTGCATGAGTGTCCATCATCTGACTCTTCTCGG...GCTGAAAGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp TCCCTGCATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGGAGTCCCACAAAATATaGGACTCCGAGAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SLHVLCPSDLILKSVANQESHKI*DSEKSQ
Trigger: CTGACTCTTCTCGGAGTCTCATATTTTGTGGGACTC...CTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATGCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAAAGGTCATTGCTGTCTCCACTTaGCATCTGCCCCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: EGKKCVLNKAWLVFRQKVIAVST*HLPLLA
Trigger: GGCCAGCAGGGGCAGATGGCAAGTGGAGACAGCAAT...GACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp CTGCATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGAAATGTTCATACATCTaGTCGGAGATGAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LHVLCPSDLILKSVANQRKCSYI*SEMKER
Trigger: CCGCTCCTTCATCTCCGAGCAGATGTATGAACATTT...CCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp TCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTTTCAGCCTGTTTCTCCCCTGGTaGTGTGCTGTATGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SVANQRHILGCHLLNAFSLFLPW*CAVCPC
Trigger: GCAAGGACATACAGCACAGCACCAGGGGAGAAACAG...GCTGAAAGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR GCA 90 bp CGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTATCACTTTCCGTCCTTaGTTCTGGGCTTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RKWESEGKKCVLNKAWLVITFRP*FWASWH
Trigger: GTGCCAGGAAGCCCAGAAGCAAGGACGGAAAGTGAT...AACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp CTTTCTCCAGAGTCAGCTCTCACACCCTGCCTCCCACAGTCTGCAATTCAACCACATCACTCTTGTCACTaGGACCAGGTTTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: LSPESALTPCLPQSAIQPHHSCH*DQVSKS
Trigger: GCTTTTAGAAACCTGGTCCCAGTGACAAGAGTGATG...TGGTTGAATTGCAGACTGTGGGAGGCAGGGTGTGAGAGCTGACTCTGGAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR CCA 90 bp GAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAAAGGTCACCTGGCTCACACCTTaGCGAGGAGCTCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: EGKKCVLNKAWLVFRQKVTWLTP*RGAQGF
Trigger: GAAGCCTTGAGCTCCTCGCCAAGGTGTGAGCCAGGT...GACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp AGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTCCACTTACTCTTCCCTaGCTGATGAGATACTTGGGG +
Preference number: 4 (lower is better)
Translates to: RWPRKWESEGKKCVLNKAPLTLP*LMRYLG
Trigger: CCCCAAGTATCTCATCAGCCAGGGAAGAGTAAGTGG...AGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp TCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTTTCAGCAGAGCCTGTATGGGATaGTGTCGCTGCCAACATCCT +
Preference number: 4 (lower is better)
Translates to: SVANQRHILGCHLLNAFSRACMG*CRCQHP
Trigger: AGGATGTTGGCAGCGACACCATCCCATACAGGCTCT...GCTGAAAGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp GCATGGAGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATGTAATAAATGTTGTCTaGAGCAGCCCTCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AWRWPRKWESEGKKCVLNVINVV*SSPQEK
Trigger: CTTCTCCTGAGGGCTGCTCCAGACAACATTTATTAC...ATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp CTTAGCACAGGGTGTCAAGCCTTCCAGAATCCACTTCAACTTCTTTCTCCAGAGTGCAATTCAACCACATaGTTCGGAAAGGCCCCCACC +
Preference number: 4 (lower is better)
Translates to: LSTGCQAFQNPLQLLSPECNSTT*FGKAPT
Trigger: GGTGGGGGCCTTTCCGAACCATGTGGTTGAATTGCA...CTCTGGAGAAAGAAGTTGAAGTGGATTCTGGAAGGCTTGACACCCTGTGCTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR TCA 90 bp CATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATGCAAGAAGTGTGTCCTaGATAAAGCTTGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: HVLCPSDLILKSVANQRHARSVS*IKLGWF
Trigger: AAACCAGCCAAGCTTTATTCAGGACACACTTCTTGC...ATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp TTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTCCGAGAAGAGTCAGATaGTGGACACTCATGCACCAC +
Preference number: 4 (lower is better)
Translates to: LKSVANQRHILGCHLLNAPRRVR*WTLMHH
Trigger: GTGGTGCATGAGTGTCCATCATCTGACTCTTCTCGG...AGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp CTTCTTTCTCCAGAGTCAGCTCTCACACCCTGCCTCCCACAGTCTGCAATTCAAAAATGTTCATACATCTaGTCGGAGATGAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LLSPESALTPCLPQSAIQKCSYI*SEMKER
Trigger: CCGCTCCTTCATCTCCGAGCAGATGTATGAACATTT...TTGAATTGCAGACTGTGGGAGGCAGGGTGTGAGAGCTGACTCTGGAGAAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR GCA 90 bp GAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAAAGGTCTCTCCCCTGGTGCTGTaGTGTATGTCCTTGCCGCAT +
Preference number: 4 (lower is better)
Translates to: EGKKCVLNKAWLVFRQKVSPLVL*CMSLPH
Trigger: ATGCGGCAAGGACATACAGCACAGCACCAGGGGAGA...GACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR GCA 90 bp CCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTCTGTTTCTCCCCTGGTaGTGTGCTGTATGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: PHFEVSGKPAAYFRVPFALFLPW*CAVCPC
Trigger: GCAAGGACATACAGCACAGCACCAGGGGAGAAACAG...AGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR GCA 90 bp TTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCCTGTTTCTCCCCTGGTaGTGTGCTGTATGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: FEVSGKPAAYFRVPFAECLFLPW*CAVCPC
Trigger: GCAAGGACATACAGCACAGCACCAGGGGAGAAACAG...GCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR GCA 90 bp CCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTATCACTTTCCGTCCTTaGTTCTGGGCTTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PHFEVSGKPAAYFRVPFAITFRP*FWASWH
Trigger: GTGCCAGGAAGCCCAGAAGCAAGGACGGAAAGTGAT...AGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp ACAAAAGGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGATCACTTTCCGTCCTTaGTTCTGGGCTTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TKGLLGNKCCLEQPSGEEITFRP*FWASWH
Trigger: GTGCCAGGAAGCCCAGAAGCAAGGACGGAAAGTGAT...CTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp TCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTTTCAGCTCCCTGCATGTGCTGTaGCCAAGTGACCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: SVANQRHILGCHLLNAFSSLHVL*PSDLIL
Trigger: CAAAATGAGGTCACTTGGGCACAGCACATGCAGGGA...GCTGAAAGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp CTTAGCACAGGGTGTCAAGCCTTCCAGAATCCACTTCAACTTCTTTCTCCAGAGCTGCCTCCCACAGTCTaGAATTCAACCACATGGTTC +
Preference number: 4 (lower is better)
Translates to: LSTGCQAFQNPLQLLSPELPPTV*NSTTWF
Trigger: GAACCATGTGGTTGAATTGCAGACTGTGGGAGGCAG...CTCTGGAGAAAGAAGTTGAAGTGGATTCTGGAAGGCTTGACACCCTGTGCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR GCA 90 bp AGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATCCGAACAGTCATCACTaGCCTCTTCTCCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: SDLILKSVANQRHILGCHPNSHH*PLLLHL
Trigger: CAGGTGAAGGAGAAGAGGGCAGTGATGACTGTTCGG...ATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392045.8
ENST00000417495.7
CDS-3UTR CCA 90 bp CATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATCATCACTCTTGTCACTaGGACCAGGTTTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: HVLCPSDLILKSVANQRHHHSCH*DQVSKS
Trigger: GCTTTTAGAAACCTGGTCCCAGTGACAAGAGTGATG...ATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp TTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCCACCTGGTAGTAGGCTaGGTGCATCTTCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: FEVSGKPAAYFRVPFAECHLVVG*VHLQHL
Trigger: GAGATGCTGAAGATGCACCCAGCCTACTACCAGGTG...GCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR CCA 90 bp TTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTCACCTGGTAGTAGGCTaGGTGCATCTTCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: LKSVANQRHILGCHLLNAHLVVG*VHLQHL
Trigger: GAGATGCTGAAGATGCACCCAGCCTACTACCAGGTG...AGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR CCA 90 bp ACAAAAGGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGAGGTGGCCACGGAAGTaGGAAAGTGAAGGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: TKGLLGNKCCLEQPSGEERWPRK*ESEGKK
Trigger: CTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCT...CTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp CCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTATTGTGCCACACGCTTaGTCACTTTCCGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: PHFEVSGKPAAYFRVPFAIVPHA*SLSVLA
Trigger: AGCAAGGACGGAAAGTGATCAAGCGTGTGGCACAAT...AGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp GCATGGAGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATCTTGGGCATTTCTTCTaGTTCTCCTTCATCTATTTG +
Preference number: 4 (lower is better)
Translates to: AWRWPRKWESEGKKCVLNLGHFF*FSFIYL
Trigger: CAAATAGATGAAGGAGAATCAGAAGAAATGCCCAAG...ATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp TTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTTCCCTGCATGTGCTGTaGCCAAGTGACCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: LKSVANQRHILGCHLLNASLHVL*PSDLIL
Trigger: CAAAATGAGGTCACTTGGGCACAGCACATGCAGGGA...AGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp CCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAACATCCTCATCTATCATCCCGTTaGTTTCTAGAACTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: PSGEEVRACMGWCRCQHPHLSSR*FLELLY
Trigger: ATACAGAAGTTCTAGAAAGCAACGGGATGATAGATG...AGGATGTTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392045.8
ENST00000420434.7
CDS-3UTR CCA 90 bp AGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTCATCACTCTTGTCACTaGGACCAGGTTTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: RWPRKWESEGKKCVLNKAHHSCH*DQVSKS
Trigger: GCTTTTAGAAACCTGGTCCCAGTGACAAGAGTGATG...AGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp GAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAACATATGGTAGTAATCTaGGTCTATCTTCTAAATCGT +
Preference number: 4 (lower is better)
Translates to: EQPSGEEVRACMGWCRCQHMVVI*VYLLNR
Trigger: ACGATTTAGAAGATAGACCCAGATTACTACCATATG...TTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp CTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTTTGAGGATTTGTCTTTaGGCAGATGAAGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LGNKCCLEQPSGEEVRACLRICL*ADEGGS
Trigger: TGAGCCTCCTTCATCTGCCCAAAGACAAATCCTCAA...ACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp TTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCCCACTTACTCTTCCCTaGCTGATGAGATACTTGGGG +
Preference number: 4 (lower is better)
Translates to: FEVSGKPAAYFRVPFAECPLTLP*LMRYLG
Trigger: CCCCAAGTATCTCATCAGCCAGGGAAGAGTAAGTGG...GCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp AGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATCCACTTACTCTTCCCTaGCTGATGAGATACTTGGGG +
Preference number: 4 (lower is better)
Translates to: SDLILKSVANQRHILGCHPLTLP*LMRYLG
Trigger: CCCCAAGTATCTCATCAGCCAGGGAAGAGTAAGTGG...ATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp TCAGCTCTCACACCCTGCCTCCCACAGTCTGCAATTCAACCACATGGTTCGGAATCTCCAGTCTTTGTTTaGAGAAACAAGTTGACACAG +
Preference number: 4 (lower is better)
Translates to: SALTPCLPQSAIQPHGSESPVFV*RNKLTQ
Trigger: CTGTGTCAACTTGTTTCTCCAAACAAAGACTGGAGA...TTCCGAACCATGTGGTTGAATTGCAGACTGTGGGAGGCAGGGTGTGAGAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR CCA 90 bp ACAAAAGGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGACACTGGTAGTAGGCTaGGTGCATCTTCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: TKGLLGNKCCLEQPSGEETLVVG*VHLQHL
Trigger: GAGATGCTGAAGATGCACCCAGCCTACTACCAGTGT...CTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACCTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417495.7
CDS-3UTR TCA 90 bp CCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTTGTGCTGTGCCCAAGTaGCCTCATTTTGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: PHFEVSGKPAAYFRVPFACAVPK*PHFEVS
Trigger: ACTGACTTCAAAATGAGGTCACTTGGGCACAGCACA...AGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp ACAAAAGGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGTACGTTCTGGATCTCTaGGACCATCCTGAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: TKGLLGNKCCLEQPSGEEYVLDL*DHPEVE
Trigger: CTCAACTTCAGGATGGTCGCAGAGATCCAGAACGTA...CTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp CGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTGGCTTCCTGAGGCACTaGTATATCATCCATTTCATG +
Preference number: 4 (lower is better)
Translates to: RKWESEGKKCVLNKAWLVGFLRH*YIIHFM
Trigger: CATGAAATGGATGATATAGCAGTGCCTCAGGAAGCC...AACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp ACAAAAGGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGCATCTATCATCCCGTTaGTTTCTAGAACTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: TKGLLGNKCCLEQPSGEEHLSSR*FLELPH
Trigger: GTGGGGGAGTTCTAGAAAGCAACGGGATGATAGATG...CTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACCTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343805.10
CDS-3UTR GCA 90 bp GAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAAAGGTCCTGAACAGTCATCACTaGCCTCTTCTCCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: EGKKCVLNKAWLVFRQKVLNSHH*PLLLHL
Trigger: CAGGTGAAGGAGAAGAGGGCAGTGATGACTGTTCAG...GACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR GCA 90 bp GAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAACCGAACAGTCATCACTaGCCTCTGACCCACATCTTG +
Preference number: 4 (lower is better)
Translates to: ESEGKKCVLNKAWLVFRQPNSHH*PLTHIL
Trigger: CAAGATGTGGGTCAGAGGGCAGTGATGACTGTTCGG...TTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343805.10
CDS-3UTR GCA 90 bp CGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTCCACAGTATCCATTGTaGCACACGCTTGATCACTTT +
Preference number: 4 (lower is better)
Translates to: RKWESEGKKCVLNKAWLVPQYPL*HTLDHF
Trigger: AAAGTGATCAAGCGTGTGGCACAATGGATACTGTGG...AACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp ACAAAAGGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGCCTGGCCGTCGGCTTTaGTATTATCATTTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: TKGLLGNKCCLEQPSGEEPGRRL*YYHFVG
Trigger: GCCAACAAAATGATAATAGCAAAGCCGACGGCCAGG...CTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp TTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTCCTGGCCGTCGGCTTTaGTATTATCATTTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LKSVANQRHILGCHLLNAPGRRL*YYHFVG
Trigger: GCCAACAAAATGATAATAGCAAAGCCGACGGCCAGG...AGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp CCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTCCTGGCCGTCGGCTTTaGTATTATCATTTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: PHFEVSGKPAAYFRVPFAPGRRL*YYHFVG
Trigger: GCCAACAAAATGATAATAGCAAAGCCGACGGCCAGG...AGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAAAGGTCTCCCTGCATGTGCTGTaGCCAAGTGACCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: EGKKCVLNKAWLVFRQKVSLHVL*PSDLIL
Trigger: CAAAATGAGGTCACTTGGGCACAGCACATGCAGGGA...GACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp TCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTTTCAGCCATCACTCTTGTCACTaGGACCAGGTTTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: SVANQRHILGCHLLNAFSHHSCH*DQVSKS
Trigger: GCTTTTAGAAACCTGGTCCCAGTGACAAGAGTGATG...GCTGAAAGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp GAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAACACCTGGTAGTAGGCTaGGTGCATCTTCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: ESEGKKCVLNKAWLVFRQHLVVG*VHLQHL
Trigger: GAGATGCTGAAGATGCACCCAGCCTACTACCAGGTG...TTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR CCA 90 bp CGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTCCTGTAACGTATTCTTaGAGGATCAGGCAGAAATCC +
Preference number: 4 (lower is better)
Translates to: RKWESEGKKCVLNKAWLVPVTYS*RIRQKS
Trigger: GGATTTCTGCCTGATCCTCCAAGAATACGTTACAGG...AACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp TCTTTCTCCAGAGTCAGCTCTCACACCCTGCCTCCCACAGTCTGCAATTCAACCGACACAGGACTGCACTaGATGATAAATTTTCATTCT +
Preference number: 4 (lower is better)
Translates to: SFSRVSSHTLPPTVCNSTDTGLH*MINFHS
Trigger: AGAATGAAAATTTATCATCCAGTGCAGTCCTGTGTC...GGTTGAATTGCAGACTGTGGGAGGCAGGGTGTGAGAGCTGACTCTGGAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR TCA 90 bp GAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAAAGGTCTGTGCTGTGCCCAAGTaGCCTCATTTTGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: EGKKCVLNKAWLVFRQKVCAVPK*PHFEVS
Trigger: ACTGACTTCAAAATGAGGTCACTTGGGCACAGCACA...GACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp ACAAAAGGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGGCAAGAAGTGTGTCCTaGATAAAGCTTGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TKGLLGNKCCLEQPSGEEARSVS*IKLGWF
Trigger: AAACCAGCCAAGCTTTATTCAGGACACACTTCTTGC...CTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACCTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp TTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTGCAAGAAGTGTGTCCTaGATAAAGCTTGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LKSVANQRHILGCHLLNAARSVS*IKLGWF
Trigger: AAACCAGCCAAGCTTTATTCAGGACACACTTCTTGC...AGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp GAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAAAGGTCGAGTCCCACAAAATATaGGACTCCGAGAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: EGKKCVLNKAWLVFRQKVESHKI*DSEKSQ
Trigger: CTGACTCTTCTCGGAGTCTCATATTTTGTGGGACTC...GACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAAAGGTCTACGTTCTGGATCTCTaGGACCATCCTGAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: EGKKCVLNKAWLVFRQKVYVLDL*DHPEVE
Trigger: CTCAACTTCAGGATGGTCGCAGAGATCCAGAACGTA...GACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp AGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATAAATGTTCATACATCTaGTCGGAGATGAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: SDLILKSVANQRHILGCHKCSYI*SEMKER
Trigger: CCGCTCCTTCATCTCCGAGCAGATGTATGAACATTT...ATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp TTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTAAATGTTCATACATCTaGTCGGAGATGAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LKSVANQRHILGCHLLNAKCSYI*SEMKER
Trigger: CCGCTCCTTCATCTCCGAGCAGATGTATGAACATTT...AGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp CTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTTTTTCATATGCTGATTaGTCCGCTCCTGGTACATTA +
Preference number: 4 (lower is better)
Translates to: LGNKCCLEQPSGEEVRACFSYAD*SAPGTL
Trigger: TAATGTACCAGGAGCGGAGCAATCAGCATATGAAAA...ACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp CCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTCCACAGTATCCATTGTaGCACACGCTTGATCACTTT +
Preference number: 4 (lower is better)
Translates to: PHFEVSGKPAAYFRVPFAPQYPL*HTLDHF
Trigger: AAAGTGATCAAGCGTGTGGCACAATGGATACTGTGG...AGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp GCATGGAGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATCATATGGTAGTAATCTaGGTCTATCTTCTAAATCGT +
Preference number: 4 (lower is better)
Translates to: AWRWPRKWESEGKKCVLNHMVVI*VYLLNR
Trigger: ACGATTTAGAAGATAGACCCAGATTACTACCATATG...ATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp CTGCATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATGGTAGTAATCTaGGTCTATCTTCTAAATCGT +
Preference number: 4 (lower is better)
Translates to: LHVLCPSDLILKSVANQRHMVVI*VYLLNR
Trigger: ACGATTTAGAAGATAGACCCAGATTACTACCATATG...CCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp ACAAAAGGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGCCTGTAACGTATTCTTaGAGGATCAGGCAGAAATCC +
Preference number: 4 (lower is better)
Translates to: TKGLLGNKCCLEQPSGEEPVTYS*RIRQKS
Trigger: GGATTTCTGCCTGATCCTCCAAGAATACGTTACAGG...CTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACCTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp CCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTCCTGTAACGTATTCTTaGAGGATCAGGCAGAAATCC +
Preference number: 4 (lower is better)
Translates to: PHFEVSGKPAAYFRVPFAPVTYS*RIRQKS
Trigger: GGATTTCTGCCTGATCCTCCAAGAATACGTTACAGG...AGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp TTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTTGAGGATTTGTCTTTaGGCAGATGAAGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: FEVSGKPAAYFRVPFAECLRICL*ADEGGS
Trigger: TGAGCCTCCTTCATCTGCCCAAAGACAAATCCTCAA...GCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp GAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAATGTGCTGTGCCCAAGTaGCCTCATTTTGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: ESEGKKCVLNKAWLVFRQCAVPK*PHFEVS
Trigger: ACTGACTTCAAAATGAGGTCACTTGGGCACAGCACA...TTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp CGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTCTTGGGCATTTCTTCTaGTTCTCCTTCATCTATTTG +
Preference number: 4 (lower is better)
Translates to: RKWESEGKKCVLNKAWLVLGHFF*FSFIYL
Trigger: CAAATAGATGAAGGAGAATCAGAAGAAATGCCCAAG...AACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAAAGGTCGGCTTCCTGAGGCACTaGTATATCATCCATTTCATG +
Preference number: 4 (lower is better)
Translates to: EGKKCVLNKAWLVFRQKVGFLRH*YIIHFM
Trigger: CATGAAATGGATGATATAGCAGTGCCTCAGGAAGCC...GACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAATGTGCTGTATGTCCTTaGCGCATCTATCATCCCGTT +
Preference number: 4 (lower is better)
Translates to: ESEGKKCVLNKAWLVFRQCAVCP*RIYHPV
Trigger: AACGGGATGATAGATGCGGCAAGGACATACAGCACA...TTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR GCA 90 bp GAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAAAGGTCCCACAGTATCCATTGTaGCACACGCTTGATCACTTT +
Preference number: 4 (lower is better)
Translates to: EGKKCVLNKAWLVFRQKVPQYPL*HTLDHF
Trigger: AAAGTGATCAAGCGTGTGGCACAATGGATACTGTGG...GACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp CATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATTTCACCAAGATTCCTTaGTGCAATTTCTTCTTATGT +
Preference number: 4 (lower is better)
Translates to: HVLCPSDLILKSVANQRHFTKIP*CNFFLC
Trigger: ACATAAGAAGAAATTGCAGCAAGGAATCTTGGTGAA...ATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp CGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTATTCATTTGGAGAGGTaGGTGTTCATAGCATACATT +
Preference number: 4 (lower is better)
Translates to: RKWESEGKKCVLNKAWLVIHLER*VFIAYI
Trigger: AATGTATGCTATGAACACTCACCTCTCCAAATGAAT...AACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp GAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAGCAAGAAGTGTGTCCTaGATAAAGCTTGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: ESEGKKCVLNKAWLVFRQARSVS*IKLGWF
Trigger: AAACCAGCCAAGCTTTATTCAGGACACACTTCTTGC...TTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR TCA 90 bp TTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTCTTGGGCATTTCTTCTaGTTCTCCTTCATCTATTTG +
Preference number: 4 (lower is better)
Translates to: LKSVANQRHILGCHLLNALGHFF*FSFIYL
Trigger: CAAATAGATGAAGGAGAATCAGAAGAAATGCCCAAG...AGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp TTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTTTTCATATGCTGATTaGTCCGCTCCTGGTACATTA +
Preference number: 4 (lower is better)
Translates to: FEVSGKPAAYFRVPFAECFSYAD*SAPGTL
Trigger: TAATGTACCAGGAGCGGAGCAATCAGCATATGAAAA...GCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp CCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTTTTTCATATGCTGATTaGTCCGCTCCTGGTACATTA +
Preference number: 4 (lower is better)
Translates to: PHFEVSGKPAAYFRVPFAFSYAD*SAPGTL
Trigger: TAATGTACCAGGAGCGGAGCAATCAGCATATGAAAA...AGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp AGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATCATAAGGCAGTAACTTaGGCATTTCTTCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: SDLILKSVANQRHILGCHHKAVT*AFLLIL
Trigger: GAGAATCAGAAGAAATGCCCAAGTTACTGCCTTATG...ATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp TTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCCATAAGGCAGTAACTTaGGCATTTCTTCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: FEVSGKPAAYFRVPFAECHKAVT*AFLLIL
Trigger: GAGAATCAGAAGAAATGCCCAAGTTACTGCCTTATG...GCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp AGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTTCATGACAGGCATTaGTGTTCTCTTGTTTACCAT +
Preference number: 4 (lower is better)
Translates to: SDLILKSVANQRHILGCHFHDRH*CSLVYH
Trigger: ATGGTAAACAAGAGAACAGCAATGCCTGTCATGAAA...ATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp TTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTTTCATGACAGGCATTaGTGTTCTCTTGTTTACCAT +
Preference number: 4 (lower is better)
Translates to: FEVSGKPAAYFRVPFAECFHDRH*CSLVYH
Trigger: ATGGTAAACAAGAGAACAGCAATGCCTGTCATGAAA...GCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp ACAAAAGGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGTTTCATGACAGGCATTaGTGTTCTCTTGTTTACCAT +
Preference number: 4 (lower is better)
Translates to: TKGLLGNKCCLEQPSGEEFHDRH*CSLVYH
Trigger: ATGGTAAACAAGAGAACAGCAATGCCTGTCATGAAA...CTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACCTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp TTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTCATCTATCATCCCGTTaGTTTCTAGAACTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: LKSVANQRHILGCHLLNAHLSSR*FLELLY
Trigger: ATACAGAAGTTCTAGAAAGCAACGGGATGATAGATG...AGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392045.8
ENST00000420434.7
CDS-3UTR GCA 90 bp CCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTTTCACCAAGATTCCTTaGTGCAATTTCTTCTTATGT +
Preference number: 4 (lower is better)
Translates to: PHFEVSGKPAAYFRVPFAFTKIP*CNFFLC
Trigger: ACATAAGAAGAAATTGCAGCAAGGAATCTTGGTGAA...AGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp AGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTCACCAAGATTCCTTaGTGCAATTTCTTCTTATGT +
Preference number: 4 (lower is better)
Translates to: SDLILKSVANQRHILGCHFTKIP*CNFFLC
Trigger: ACATAAGAAGAAATTGCAGCAAGGAATCTTGGTGAA...ATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CCA 90 bp AGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATCATATGGTAGTAATCTaGGTCTATCTTCTAAATCGT +
Preference number: 4 (lower is better)
Translates to: SDLILKSVANQRHILGCHHMVVI*VYLLNR
Trigger: ACGATTTAGAAGATAGACCCAGATTACTACCATATG...ATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAATTTCATGACAGGCATTaGTGTTCTCTTGTTTACCAT +
Preference number: 4 (lower is better)
Translates to: ESEGKKCVLNKAWLVFRQFHDRH*CSLVYH
Trigger: ATGGTAAACAAGAGAACAGCAATGCCTGTCATGAAA...TTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR GCA 90 bp GAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAAAGGTCTTCACCAAGATTCCTTaGTGCAATTTCTTCTTATGT +
Preference number: 4 (lower is better)
Translates to: EGKKCVLNKAWLVFRQKVFTKIP*CNFFLC
Trigger: ACATAAGAAGAAATTGCAGCAAGGAATCTTGGTGAA...GACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAACATCCTGATTGCTGTCTCCACTaGCCATCTGCCCCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: PSGEEVRACMGWCRCQHPDCCLH*PSAPAG
Trigger: GCCAGCAGGGGCAGATGGCAAGTGGAGACAGCAATC...AGGATGTTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp TCAGCTCTCACACCCTGCCTCCCACAGTCTGCAATTCAACCACATGGTTCGGAAGATTGCTGTCTCCACTaGCCATCTGCCCCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: SALTPCLPQSAIQPHGSEDCCLH*PSAPAG
Trigger: GCCAGCAGGGGCAGATGGCAAGTGGAGACAGCAATC...TTCCGAACCATGTGGTTGAATTGCAGACTGTGGGAGGCAGGGTGTGAGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR CAA 90 bp TTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTCCTCCACCAGCCTTaGGGAGAGCTAACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: LSGAALRRRGKSLYGMVSLLHQP*GELTAH
Trigger: GTGAGCAGTTAGCTCTCCCAAAGGCTGGTGGAGGAG...CGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GCCTCCCACAGTCTGCAATTCAACCACATGGTTCGGAAAGGCCCCCACCAACCCGCGACCATCCTGAAGTaGAGATTGCTGTCTCCACTT +
Preference number: 5 (lower is better)
Translates to: ASHSLQFNHMVRKGPHQPATILK*RLLSPL
Trigger: AAGTGGAGACAGCAATCTCAACTTCAGGATGGTCGC...GGGTTGGTGGGGGCCTTTCCGAACCATGTGGTTGAATTGCAGACTGTGGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR CAA 90 bp GATGAAGGAGGCTCAGAGAAAAGCCCCTCCCTGCATGTGCTGTGCCCAAGTGACCATTGTGCCACACGCTaGATCACTTTCCGTCCTTGC +
Preference number: 5 (lower is better)
Translates to: DEGGSEKSPSLHVLCPSDHCATR*ITFRPC
Trigger: GCAAGGACGGAAAGTGATCAAGCGTGTGGCACAATG...GTCACTTGGGCACAGCACATGCAGGGAGGGGCTTTTCTCTGAGCCTCCTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS GCA 90 bp GGTGCATCTTCAGCATCTCCTCCACCAGCCTTTGGGAGAGCTAACTaGTCACAAGACTCTGAAGAGAAACCTGGCTCACACCTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: GASSASPPPAFGRAN*SQDSEEKPGSHLGE
Trigger: CTCGCCAAGGTGTGAGCCAGGTTTCTCTTCAGAGTCTTGTGAGCAGTTAGCTCTCCCAAAGGCTGGTGGAGGAGATGCTGAAGATGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp AGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTGATTGCTGTCTCCACTaGCCATCTGCCCCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: RWPRKWESEGKKCVLNKADCCLH*PSAPAG
Trigger: GCCAGCAGGGGCAGATGGCAAGTGGAGACAGCAATC...AGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATAACCTGGCTCACACCTaGGCGAGGAGCTCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: HVLCPSDLILKSVANQRHNLAHT*ARSSRL
Trigger: AAGCCTTGAGCTCCTCGCCAAGGTGTGAGCCAGGTT...ATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp TTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGTGCTGTATGTCCTaGCCGCATCTATCATCCCGT +
Preference number: 5 (lower is better)
Translates to: LSGAALRRRGKSLYGMVSLCCMS*PHLSSR
Trigger: ACGGGATGATAGATGCGGCAAGGACATACAGCACAG...CGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS GCA 90 bp GCAAACCTGCTCCTGCAGGTTCTGACCCTCTACGTTCTGGATCTCTaGGACCATCCTTCAGGGATTTGGTATTTGCTCAGTGAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: ANLLLQVLTLYVLDL*DHPSGIWYLLSEAH
Trigger: GTGGGCTTCACTGAGCAAATACCAAATCCCTGAAGGATGGTCGCAGAGATCCAGAACGTAGAGGGTCAGAACCTGCAGGAGCAGGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544128.5
CDS-3UTR CAA 90 bp GAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAAATCCTGAAGTTGAGATaGCTGTCTCCACTTGCCATC +
Preference number: 5 (lower is better)
Translates to: EQPSGEEVRACMGWCRCQILKLR*LSPLAI
Trigger: GATGGCAAGTGGAGACAGCAATCTCAACTTCAGGAT...TTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTCTCCTCCACCAGCCTTaGGGAGAGCTAACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: LGNKCCLEQPSGEEVRACLLHQP*GELTAH
Trigger: GTGAGCAGTTAGCTCTCCCAAAGGCTGGTGGAGGAG...ACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GCATGGAGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATCATTGTGCCACACGCTaGATCACTTTCCGTCCTTGC +
Preference number: 5 (lower is better)
Translates to: AWRWPRKWESEGKKCVLNHCATR*ITFRPC
Trigger: GCAAGGACGGAAAGTGATCAAGCGTGTGGCACAATG...ATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GATGAAGGAGGCTCAGAGAAAAGCCCCTCCCTGCATGTGCTGTGCCCAAGTGACACCTGGCCGTCGGCTTaGCTATTATCATTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: DEGGSEKSPSLHVLCPSDTWPSA*LLSFCW
Trigger: CCAACAAAATGATAATAGCAAAGCCGACGGCCAGGT...GTCACTTGGGCACAGCACATGCAGGGAGGGGCTTTTCTCTGAGCCTCCTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGATTGCTGTCTCCACTaGCCATCTGCCCCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: PHFEVSGKPAAYFRVPFADCCLH*PSAPAG
Trigger: GCCAGCAGGGGCAGATGGCAAGTGGAGACAGCAATC...AGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CTGCATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGGCGACCATCCTGAAGTaGAGATTGCTGTCTCCACTT +
Preference number: 5 (lower is better)
Translates to: LHVLCPSDLILKSVANQRATILK*RLLSPL
Trigger: AAGTGGAGACAGCAATCTCAACTTCAGGATGGTCGC...CCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GCTCTCACACCCTGCCTCCCACAGTCTGCAATTCAACCACATGGTTCGGAAAGGCACAATACATCACTCTaGTCACTGGGACCAGGTTTC +
Preference number: 5 (lower is better)
Translates to: ALTPCLPQSAIQPHGSERHNTSL*SLGPGF
Trigger: GAAACCTGGTCCCAGTGACAAGAGTGATGTATTGTG...CCTTTCCGAACCATGTGGTTGAATTGCAGACTGTGGGAGGCAGGGTGTGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR CAA 90 bp CGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTAACCTGGCTCACACCTaGGCGAGGAGCTCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: RKWESEGKKCVLNKAWLVNLAHT*ARSSRL
Trigger: AAGCCTTGAGCTCCTCGCCAAGGTGTGAGCCAGGTT...AACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTCTCCTCCACCAGCCTTaGGGAGAGCTAACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: RKWESEGKKCVLNKAWLVLLHQP*GELTAH
Trigger: GTGAGCAGTTAGCTCTCCCAAAGGCTGGTGGAGGAG...AACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp TTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGAGATCAAAGGTCTCTTaGTCTCTTCCCTCTGGACTC +
Preference number: 5 (lower is better)
Translates to: LSGAALRRRGKSLYGMVSRSKVS*SLPSGL
Trigger: GAGTCCAGAGGGAAGAGACAAAGAGACCTTTGATCT...CGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR CAA 90 bp TCCCTGCATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCATTGTGCCACACGCTaGATCACTTTCCGTCCTTGC +
Preference number: 5 (lower is better)
Translates to: SLHVLCPSDLILKSVANQHCATR*ITFRPC
Trigger: GCAAGGACGGAAAGTGATCAAGCGTGTGGCACAATG...CTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATGCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GATGAAGGAGGCTCAGAGAAAAGCCCCTCCCTGCATGTGCTGTGCCCAAGTGACTCCTGTAACGTATTCTaGGAGGATCAGGCAGAAATC +
Preference number: 5 (lower is better)
Translates to: DEGGSEKSPSLHVLCPSDSCNVF*EDQAEI
Trigger: GATTTCTGCCTGATCCTCCAAGAATACGTTACAGGA...GTCACTTGGGCACAGCACATGCAGGGAGGGGCTTTTCTCTGAGCCTCCTTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp TTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCCAAGTGACCTCATTTaGAAGTCAGTGGCAAACCAG +
Preference number: 5 (lower is better)
Translates to: LSGAALRRRGKSLYGMVSPSDLI*KSVANQ
Trigger: CTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGG...CGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAAAGGTCGATTGCTGTCTCCACTaGCCATCTGCCCCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: EGKKCVLNKAWLVFRQKVDCCLH*PSAPAG
Trigger: GCCAGCAGGGGCAGATGGCAAGTGGAGACAGCAATC...GACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CTTTCTCCAGAGTCAGCTCTCACACCCTGCCTCCCACAGTCTGCAATTCAACCAATCCTGAAGTTGAGATaGCTGTCTCCACTTGCCATC +
Preference number: 5 (lower is better)
Translates to: LSPESALTPCLPQSAIQPILKLR*LSPLAI
Trigger: GATGGCAAGTGGAGACAGCAATCTCAACTTCAGGAT...TGGTTGAATTGCAGACTGTGGGAGGCAGGGTGTGAGAGCTGACTCTGGAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR CAA 90 bp TCCCTGCATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGGCGACCATCCTGAAGTaGAGATTGCTGTCTCCACTT +
Preference number: 5 (lower is better)
Translates to: SLHVLCPSDLILKSVANQATILK*RLLSPL
Trigger: AAGTGGAGACAGCAATCTCAACTTCAGGATGGTCGC...CTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATGCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GCTCTCACACCCTGCCTCCCACAGTCTGCAATTCAACCACATGGTTCGGAAAGGCTTGCAATCTCCACCTaGTTTTCTCTGAAGAACCTG +
Preference number: 5 (lower is better)
Translates to: ALTPCLPQSAIQPHGSERLAIST*FSLKNL
Trigger: CAGGTTCTTCAGAGAAAACAAGGTGGAGATTGCAAG...CCTTTCCGAACCATGTGGTTGAATTGCAGACTGTGGGAGGCAGGGTGTGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS-3UTR CAA 90 bp TTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTTGCAATCTCCACCTaGTTTTCTCTGAAGAACCTG +
Preference number: 5 (lower is better)
Translates to: LSGAALRRRGKSLYGMVSLAIST*FSLKNL
Trigger: CAGGTTCTTCAGAGAAAACAAGGTGGAGATTGCAAG...CGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CTGCATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCACAATACATCACTCTaGTCACTGGGACCAGGTTTC +
Preference number: 5 (lower is better)
Translates to: LHVLCPSDLILKSVANQRHNTSL*SLGPGF
Trigger: GAAACCTGGTCCCAGTGACAAGAGTGATGTATTGTG...CCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GCATGGAGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATCACAATACATCACTCTaGTCACTGGGACCAGGTTTC +
Preference number: 5 (lower is better)
Translates to: AWRWPRKWESEGKKCVLNHNTSL*SLGPGF
Trigger: GAAACCTGGTCCCAGTGACAAGAGTGATGTATTGTG...ATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp ACAAAAGGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGAACCTGGCTCACACCTaGGCGAGGAGCTCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: TKGLLGNKCCLEQPSGEENLAHT*ARSSRL
Trigger: AAGCCTTGAGCTCCTCGCCAAGGTGTGAGCCAGGTT...CTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTAACCTGGCTCACACCTaGGCGAGGAGCTCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: PHFEVSGKPAAYFRVPFANLAHT*ARSSRL
Trigger: AAGCCTTGAGCTCCTCGCCAAGGTGTGAGCCAGGTT...AGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp ACAAAAGGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGCTCCTCCACCAGCCTTaGGGAGAGCTAACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: TKGLLGNKCCLEQPSGEELLHQP*GELTAH
Trigger: GTGAGCAGTTAGCTCTCCCAAAGGCTGGTGGAGGAG...CTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GCATGGAGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAGATCAAAGGTCTCTTaGTCTCTTCCCTCTGGACTC +
Preference number: 5 (lower is better)
Translates to: AWRWPRKWESEGKKCVLNRSKVS*SLPSGL
Trigger: GAGTCCAGAGGGAAGAGACAAAGAGACCTTTGATCT...ATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392045.8
ENST00000420434.7
CDS-3UTR CAA 90 bp AGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTCATTGTGCCACACGCTaGATCACTTTCCGTCCTTGC +
Preference number: 5 (lower is better)
Translates to: RWPRKWESEGKKCVLNKAHCATR*ITFRPC
Trigger: GCAAGGACGGAAAGTGATCAAGCGTGTGGCACAATG...AGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CTGCATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGTATCCACAGTATCCATaGTGCCACACGCTTGATCAC +
Preference number: 5 (lower is better)
Translates to: LHVLCPSDLILKSVANQRYPQYP*CHTLDH
Trigger: GTGATCAAGCGTGTGGCACAATGGATACTGTGGATA...CCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GCCTCCCACAGTCTGCAATTCAACCACATGGTTCGGAAAGGCCCCCACCAACCCTTCTCCAGTCTTTGTTaGGAGAAACAAGTTGACACA +
Preference number: 5 (lower is better)
Translates to: ASHSLQFNHMVRKGPHQPFSSLC*EKQVDT
Trigger: TGTGTCAACTTGTTTCTCCAAACAAAGACTGGAGAA...GGGTTGGTGGGGGCCTTTCCGAACCATGTGGTTGAATTGCAGACTGTGGGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373645.3
CDS GCA 90 bp ACCTGGCTCACACCTTGGCGAGGAGCTCAAGGCTTCCTGAGGCACTaGTATATCATCCATTTCATGACAGGCATTGCTGTTCTCTTGTTT +
Preference number: 5 (lower is better)
Translates to: TWLTPWRGAQGFLRH*YIIHFMTGIAVLLF
Trigger: AAACAAGAGAACAGCAATGCCTGTCATGAAATGGATGATATAGCAGTGCCTCAGGAAGCCTTGAGCTCCTCGCCAAGGTGTGAGCCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS CCA 90 bp CTGACCCTCTACGTTCTGGATCTCTGCGACCATCCTTCAGGGATTTaGTATTTGCTCAGTGAAGCCCACAAGTTTGCAAGCCCATCTCAT +
Preference number: 5 (lower is better)
Translates to: LTLYVLDLCDHPSGI*YLLSEAHKFASPSH
Trigger: ATGAGATGGGCTTGCAAACTTGTGGGCTTCACTGAGCAAATACCAAATCCCTGAAGGATGGTCGCAGAGATCCAGAACGTAGAGGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544128.5
CDS-3UTR CAA 90 bp AGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTGCGACCATCCTGAAGTaGAGATTGCTGTCTCCACTT +
Preference number: 5 (lower is better)
Translates to: RWPRKWESEGKKCVLNKAATILK*RLLSPL
Trigger: AAGTGGAGACAGCAATCTCAACTTCAGGATGGTCGC...AGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GATGAAGGAGGCTCAGAGAAAAGCCCCTCCCTGCATGTGCTGTGCCCAAGTGACGCTATTATCATTTTGTaGGCTGTTTTCCTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: DEGGSEKSPSLHVLCPSDAIIIL*AVFLPS
Trigger: AGAAGGCAGGAAAACAGCCAACAAAATGATAATAGC...GTCACTTGGGCACAGCACATGCAGGGAGGGGCTTTTCTCTGAGCCTCCTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATACCTGGCCGTCGGCTTaGCTATTATCATTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: HVLCPSDLILKSVANQRHTWPSA*LLSFCW
Trigger: CCAACAAAATGATAATAGCAAAGCCGACGGCCAGGT...ATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GATGAAGGAGGCTCAGAGAAAAGCCCCTCCCTGCATGTGCTGTGCCCAAGTGACCTTCACCAAGATTCCTaGCTGCAATTTCTTCTTATG +
Preference number: 5 (lower is better)
Translates to: DEGGSEKSPSLHVLCPSDLHQDS*LQFLLM
Trigger: CATAAGAAGAAATTGCAGCAAGGAATCTTGGTGAAG...GTCACTTGGGCACAGCACATGCAGGGAGGGGCTTTTCTCTGAGCCTCCTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CTGCATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGTCCTGTAACGTATTCTaGGAGGATCAGGCAGAAATC +
Preference number: 5 (lower is better)
Translates to: LHVLCPSDLILKSVANQRSCNVF*EDQAEI
Trigger: GATTTCTGCCTGATCCTCCAAGAATACGTTACAGGA...CCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp TTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGGCATCTATCATCCCGTaGCTTTCTAGAACTTCTGTA +
Preference number: 5 (lower is better)
Translates to: LSGAALRRRGKSLYGMVSASIIP*LSRTSV
Trigger: TACAGAAGTTCTAGAAAGCAACGGGATGATAGATGC...CGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392045.8
ENST00000420434.7
CDS-3UTR CAA 90 bp CATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATCTTGCAATCTCCACCTaGTTTTCTCTGAAGAACCTG +
Preference number: 5 (lower is better)
Translates to: HVLCPSDLILKSVANQRHLAIST*FSLKNL
Trigger: CAGGTTCTTCAGAGAAAACAAGGTGGAGATTGCAAG...ATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTTATCCACAGTATCCATaGTGCCACACGCTTGATCAC +
Preference number: 5 (lower is better)
Translates to: LGNKCCLEQPSGEEVRACYPQYP*CHTLDH
Trigger: GTGATCAAGCGTGTGGCACAATGGATACTGTGGATA...ACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTGCCAACATCCTGCTATTATCATTTTGTaGGCTGTTTTCCTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: PSGEEVRACMGWCRCQHPAIIIL*AVFLPS
Trigger: AGAAGGCAGGAAAACAGCCAACAAAATGATAATAGC...AGGATGTTGGCAGCGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTACCTGGCCGTCGGCTTaGCTATTATCATTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: LGNKCCLEQPSGEEVRACTWPSA*LLSFCW
Trigger: CCAACAAAATGATAATAGCAAAGCCGACGGCCAGGT...ACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp TTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTATGGGATGGTGTCGCTTCACCAAGATTCCTaGCTGCAATTTCTTCTTATG +
Preference number: 5 (lower is better)
Translates to: LSGAALRRRGKSLYGMVSLHQDS*LQFLLM
Trigger: CATAAGAAGAAATTGCAGCAAGGAATCTTGGTGAAG...CGACACCATCCCATACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAATCCTGAAGTTGAGATaGCTGTCTCCACTTGCCATC +
Preference number: 5 (lower is better)
Translates to: GLLGNKCCLEQPSGEEVRILKLR*LSPLAI
Trigger: GATGGCAAGTGGAGACAGCAATCTCAACTTCAGGAT...TCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGCATCTATCATCCCGTaGCTTTCTAGAACTCCCCCA +
Preference number: 5 (lower is better)
Translates to: PHFEVSGKPAAYFRVPFAASIIP*LSRTPP
Trigger: TGGGGGAGTTCTAGAAAGCAACGGGATGATAGATGC...AGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343805.10
CDS-3UTR CAA 90 bp GAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAAAGGTCCTGTGCTGTATGTCCTaGCCGCATCTATCATCCCGT +
Preference number: 5 (lower is better)
Translates to: EGKKCVLNKAWLVFRQKVLCCMS*PHLSSR
Trigger: ACGGGATGATAGATGCGGCAAGGACATACAGCACAG...GACCTTTTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR CAA 90 bp GCATGGAGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATCTTCACCAAGATTCCTaGCTGCAATTTCTTCTTATG +
Preference number: 5 (lower is better)
Translates to: AWRWPRKWESEGKKCVLNLHQDS*LQFLLM
Trigger: CATAAGAAGAAATTGCAGCAAGGAATCTTGGTGAAG...ATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCTCCATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp AGGTGGCCACGGAAGTGGGAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTCCTGTAACGTATTCTaGGAGGATCAGGCAGAAATC +
Preference number: 5 (lower is better)
Translates to: RWPRKWESEGKKCVLNKASCNVF*EDQAEI
Trigger: GATTTCTGCCTGATCCTCCAAGAATACGTTACAGGA...AGCTTTATTCAGGACACACTTCTTGCCTTCACTTTCCCACTTCCGTGGCCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp TCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTTTCAGCCCAAGTGACCTCATTTaGAAGTCAGTGGCAAACCAG +
Preference number: 5 (lower is better)
Translates to: SVANQRHILGCHLLNAFSPSDLI*KSVANQ
Trigger: CTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGG...GCTGAAAGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS GCA 90 bp TTATGGCTACCATTAGTAGATTGTTTACAAGTACCTAGGATGATCTaGACCCATACAGCATTCCCATTCTCTCTCCTGCCCCACCTCCCT +
Preference number: 5 (lower is better)
Translates to: LWLPLVDCLQVPRMI*THTAFPFSLLPHLP
Trigger: AGGGAGGTGGGGCAGGAGAGAGAATGGGAATGCTGTATGGGTGCAGATCATCCTAGGTACTTGTAAACAATCTACTAATGGTAGCCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473711.1
CDS GCA 90 bp TCTACGTTCTGGATCTCTGCGACCATCCTTCAGGGATTTGGTATTTaGTCAGTGAAGCCCACAAGTTTGCAAGCCCATCTCATTAAATGG +
Preference number: 5 (lower is better)
Translates to: STFWISATILQGFGI*SVKPTSLQAHLIKW
Trigger: CCATTTAATGAGATGGGCTTGCAAACTTGTGGGCTTCACTGAGCAAATACCAAATCCCTGAAGGATGGTCGCAGAGATCCAGAACGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544128.5
CDS CCA 90 bp CCCCTCGGTGCTCAGAACAACAAGCAAAGGACCACCAGCTCACATTaGATATTTTCATTAGTGGAATCACCATTGTTGACAGTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: PLGAQNNKQRTTSSH*IFSLVESPLLTVPP
Trigger: AGGAGGAACTGTCAACAATGGTGATTCCACTAATGAAAATATCCAATGTGAGCTGGTGGTCCTTTGCTTGTTGTTCTGAGCACCGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456542.5
CDS-3UTR CAA 90 bp TTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTATCCTGAAGTTGAGATaGCTGTCTCCACTTGCCATC +
Preference number: 5 (lower is better)
Translates to: LKSVANQRHILGCHLLNAILKLR*LSPLAI
Trigger: GATGGCAAGTGGAGACAGCAATCTCAACTTCAGGAT...AGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp TCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTTTCAGCCTTGCAATCTCCACCTaGTTTTCTCTGAAGAACCTG +
Preference number: 5 (lower is better)
Translates to: SVANQRHILGCHLLNAFSLAIST*FSLKNL
Trigger: CAGGTTCTTCAGAGAAAACAAGGTGGAGATTGCAAG...GCTGAAAGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAACTGTGCTGTATGTCCTaGCCGCATCTATCATCCCGT +
Preference number: 5 (lower is better)
Translates to: ESEGKKCVLNKAWLVFRQLCCMS*PHLSSR
Trigger: ACGGGATGATAGATGCGGCAAGGACATACAGCACAG...TTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR CAA 90 bp TTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTAGATCAAAGGTCTCTTaGTCTCTTCCCTCTGGACTC +
Preference number: 5 (lower is better)
Translates to: LKSVANQRHILGCHLLNARSKVS*SLPSGL
Trigger: GAGTCCAGAGGGAAGAGACAAAGAGACCTTTGATCT...AGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000420434.7
CDS-3UTR CAA 90 bp TTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTTATCCACAGTATCCATaGTGCCACACGCTTGATCAC +
Preference number: 5 (lower is better)
Translates to: LKSVANQRHILGCHLLNAYPQYP*CHTLDH
Trigger: GTGATCAAGCGTGTGGCACAATGGATACTGTGGATA...AGCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp TTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGAATGCTATCCACAGTATCCATaGTGCCACACGCTTGATCAC +
Preference number: 5 (lower is better)
Translates to: FEVSGKPAAYFRVPFAECYPQYP*CHTLDH
Trigger: GTGATCAAGCGTGTGGCACAATGGATACTGTGGATA...GCATTCAGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CATGTGCTGTGCCCAAGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATGCTATTATCATTTTGTaGGCTGTTTTCCTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: HVLCPSDLILKSVANQRHAIIIL*AVFLPS
Trigger: AGAAGGCAGGAAAACAGCCAACAAAATGATAATAGC...ATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGGGCACAGCACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GGTCTTCTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGATCCTGTAACGTATTCTaGGAGGATCAGGCAGAAATC +
Preference number: 5 (lower is better)
Translates to: GLLGNKCCLEQPSGEEVRSCNVF*EDQAEI
Trigger: GATTTCTGCCTGATCCTCCAAGAATACGTTACAGGA...TCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp AGTGACCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATCCAAGTGACCTCATTTaGAAGTCAGTGGCAAACCAG +
Preference number: 5 (lower is better)
Translates to: SDLILKSVANQRHILGCHPSDLI*KSVANQ
Trigger: CTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGG...ATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS TCA 90 bp TCTGGATCTCTGCGACCATCCTTCAGGGATTTGGTATTTGCTCAGTaGAGCCCACAAGTTTGCAAGCCCATCTCATTAAATGGAGTTTCA +
Preference number: 5 (lower is better)
Translates to: SGSLRPSFRDLVFAQ*SPQVCKPISLNGVS
Trigger: TGAAACTCCATTTAATGAGATGGGCTTGCAAACTTGTGGGCTTCACTGAGCAAATACCAAATCCCTGAAGGATGGTCGCAGAGATCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544128.5
CDS-3UTR CAA 90 bp GAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAGCGACCATCCTGAAGTaGAGATTGCTGTCTCCACTT +
Preference number: 5 (lower is better)
Translates to: ESEGKKCVLNKAWLVFRQATILK*RLLSPL
Trigger: AAGTGGAGACAGCAATCTCAACTTCAGGATGGTCGC...TTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CTGGGTAATAAATGTTGTCTGGAGCAGCCCTCAGGAGAAGAGGTAAGAGCCTGTCTTCACCAAGATTCCTaGCTGCAATTTCTTCTTATG +
Preference number: 5 (lower is better)
Translates to: LGNKCCLEQPSGEEVRACLHQDS*LQFLLM
Trigger: CATAAGAAGAAATTGCAGCAAGGAATCTTGGTGAAG...ACAGGCTCTTACCTCTTCTCCTGAGGGCTGCTCCAGACAACATTTATTACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAATCCTGAAGTTGAGATaGCTGTCTCCACTTGCCATC +
Preference number: 5 (lower is better)
Translates to: ESEGKKCVLNKAWLVFRQILKLR*LSPLAI
Trigger: GATGGCAAGTGGAGACAGCAATCTCAACTTCAGGAT...TTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAACACAATACATCACTCTaGTCACTGGGACCAGGTTTC +
Preference number: 5 (lower is better)
Translates to: ESEGKKCVLNKAWLVFRQHNTSL*SLGPGF
Trigger: GAAACCTGGTCCCAGTGACAAGAGTGATGTATTGTG...TTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAAACCTGGCCGTCGGCTTaGCTATTATCATTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: ESEGKKCVLNKAWLVFRQTWPSA*LLSFCW
Trigger: CCAACAAAATGATAATAGCAAAGCCGACGGCCAGGT...TTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp GAAAGTGAAGGCAAGAAGTGTGTCCTGAATAAAGCTTGGCTGGTTTTCAGACAACCAAGTGACCTCATTTaGAAGTCAGTGGCAAACCAG +
Preference number: 5 (lower is better)
Translates to: ESEGKKCVLNKAWLVFRQPSDLI*KSVANQ
Trigger: CTGGTTTGCCACTGACTTCAAAATGAGGTCACTTGG...TTGTCTGAAAACCAGCCAAGCTTTATTCAGGACACACTTCTTGCCTTCACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS-3UTR CAA 90 bp CCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGCATCTATCATCCCGTaGCTTTCTAGAACTTCTGTA +
Preference number: 5 (lower is better)
Translates to: PHFEVSGKPAAYFRVPFAASIIP*LSRTSV
Trigger: TACAGAAGTTCTAGAAAGCAACGGGATGATAGATGC...AGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392045.8
ENST00000420434.7
CDS-3UTR CAA 90 bp CCTCATTTTGAAGTCAGTGGCAAACCAGCGGCATATTTTAGGGTGCCATTTGCTGCTATTATCATTTTGTaGGCTGTTTTCCTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: PHFEVSGKPAAYFRVPFAAIIIL*AVFLPS
Trigger: AGAAGGCAGGAAAACAGCCAACAAAATGATAATAGC...AGCAAATGGCACCCTAAAATATGCCGCTGGTTTGCCACTGACTTCAAAATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS CCA 90 bp GTTCACTTACCTCAGAACAACAAGCAAAGGACCACCAGCTCACATTaGATATTTTCATTAGTGGAATCACCATTGTTGACAGTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: VHLPQNNKQRTTSSH*IFSLVESPLLTVPP
Trigger: AGGAGGAACTGTCAACAATGGTGATTCCACTAATGAAAATATCCAATGTGAGCTGGTGGTCCTTTGCTTGTTGTTCTGAGGTAAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441657.1
CDS CCA 90 bp AACCACTTTTGTAAAACTAACAAATTGGATACAAGATTAGAATTATaGTTCAGGAGTCATGTAGCTGGAGGTCACATGATCCATAACCAC +
Preference number: 5 (lower is better)
Translates to: NHFCKTNKLDTRLEL*FRSHVAGGHMIHNH
Trigger: GTGGTTATGGATCATGTGACCTCCAGCTACATGACTCCTGAACCATAATTCTAATCTTGTATCCAATTTGTTAGTTTTACAAAAGTGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538494.1
ENST00000544128.5
CDS GCA 72 bp CTCCTGCAGGTTCTGACCCTCTACGTTCTGGATCTCTaGGACCATCCCCCTCCTTGCTCTGGGACCAAAACC +
Preference number: 6 (lower is better)
Translates to: LLQVLTLYVLDL*DHPPPCSGTKT
Trigger: GGTTTTGGTCCCAGAGCAAGGAGGGGGATGGTCGCAGAGATCCAGAACGTAGAGGGTCAGAACCTGCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538494.1
CDS GCA 72 bp CTGTGCTGTATGTCCTTGCCGCATCTATCATCCCGTTaGTTTCTAGAACTCCCCCACCTGGTAGTAGGCTGG +
Preference number: 6 (lower is better)
Translates to: LCCMSLPHLSSR*FLELPHLVVGW
Trigger: CCAGCCTACTACCAGGTGGGGGAGTTCTAGAAAGCAACGGGATGATAGATGCGGCAAGGACATACAGCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343805.10
CDS CAA 72 bp GCTGTGCTGTATGTCCTTGCCGCATCTATCATCCCGTaGCTTTCTAGAACTCCCCCACCTGGTAGTAGGCTG +
Preference number: 6 (lower is better)
Translates to: AVLYVLAASIIP*LSRTPPPGSRL
Trigger: CAGCCTACTACCAGGTGGGGGAGTTCTAGAAAGCAACGGGATGATAGATGCGGCAAGGACATACAGCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343805.10
CDS CAA 90 bp CTGGTAGTAGGCTGGGTGCATCTTCAGCATCTCCTCCACCAGCCTTaGGGAGAGCTAACTGCTCACAAGACTCTGAAGAGAAACCTGGCT +
Preference number: 6 (lower is better)
Translates to: LVVGWVHLQHLLHQP*GELTAHKTLKRNLA
Trigger: AGCCAGGTTTCTCTTCAGAGTCTTGTGAGCAGTTAGCTCTCCCAAAGGCTGGTGGAGGAGATGCTGAAGATGCACCCAGCCTACTACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343805.10
ENST00000392045.8
ENST00000417495.7
ENST00000420434.7
CDS GCA 72 bp CCACCAACCCCCTTTTCTGTCTTCATAGCTTTCACATaGAGCTCCTCCTCAGTGTACCAGTATGTGCTAGGC +
Preference number: 6 (lower is better)
Translates to: PPTPFSVFIAFT*SSSSVYQYVLG
Trigger: GCCTAGCACATACTGGTACACTGAGGAGGAGCTGCATGTGAAAGCTATGAAGACAGAAAAGGGGGTTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373645.3
ENST00000538494.1
ENST00000544128.5
CDS GCA 72 bp TGGATCTCTGCGACCATCCTTCAGGGATTTGGTATTTaGTCAGTGAAGCCCACAAGTTTGCAAGCCCATCTC +
Preference number: 6 (lower is better)
Translates to: WISATILQGFGI*SVKPTSLQAHL
Trigger: GAGATGGGCTTGCAAACTTGTGGGCTTCACTGAGCAAATACCAAATCCCTGAAGGATGGTCGCAGAGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544128.5
CDS CAA 72 bp CTGGATCTCTGCGACCATCCTTCAGGGATTTGGTATTaGCTCAGTGAAGCCCACAAGTTTGCAAGCCCATCT +
Preference number: 6 (lower is better)
Translates to: LDLCDHPSGIWY*LSEAHKFASPS
Trigger: AGATGGGCTTGCAAACTTGTGGGCTTCACTGAGCAAATACCAAATCCCTGAAGGATGGTCGCAGAGATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544128.5
CDS CCA 72 bp TACGTTCTGGATCTCTGCGACCATCCTTCAGGGATTTaGTATTTGCTCAGTGAAGCCCACAAGTTTGCAAGC +
Preference number: 6 (lower is better)
Translates to: YVLDLCDHPSGI*YLLSEAHKFAS
Trigger: GCTTGCAAACTTGTGGGCTTCACTGAGCAAATACCAAATCCCTGAAGGATGGTCGCAGAGATCCAGAACGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544128.5
CDS CAA 90 bp GCCCCTCGGTGCTCAGAACAACAAGCAAAGGACCACCAGCTCACATaGGATATTTTCATTAGTGGAATCACCATTGTTGACAGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: APRCSEQQAKDHQLT*DIFISGITIVDSSS
Trigger: GGAGGAACTGTCAACAATGGTGATTCCACTAATGAAAATATCCAATGTGAGCTGGTGGTCCTTTGCTTGTTGTTCTGAGCACCGAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456542.5
CDS TCA 72 bp CTGCGACCATCCTTCAGGGATTTGGTATTTGCTCAGTaGAGCCCACAAGTTTGCAAGCCCATCTCATTAAAT +
Preference number: 6 (lower is better)
Translates to: LRPSFRDLVFAQ*SPQVCKPISLN
Trigger: ATTTAATGAGATGGGCTTGCAAACTTGTGGGCTTCACTGAGCAAATACCAAATCCCTGAAGGATGGTCGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544128.5
CDS GCA 72 bp CCATTAGTAGATTGTTTACAAGTACCTAGGATGATCTaGACCCATACAGCATTCCCATTCTCTCTCCTGCCC +
Preference number: 6 (lower is better)
Translates to: PLVDCLQVPRMI*THTAFPFSLLP
Trigger: GGGCAGGAGAGAGAATGGGAATGCTGTATGGGTGCAGATCATCCTAGGTACTTGTAAACAATCTACTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473711.1
CDS GCA 72 bp CTGTGCTGTATGTCCTTGCCGCATCTATCATCCCGTTaGTTTCTAGAACTTCTGTATCATAAGGCAGTAACT +
Preference number: 6 (lower is better)
Translates to: LCCMSLPHLSSR*FLELLYHKAVT
Trigger: AGTTACTGCCTTATGATACAGAAGTTCTAGAAAGCAACGGGATGATAGATGCGGCAAGGACATACAGCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392045.8
ENST00000420434.7
CDS CAA 90 bp TACCAGTATGTGCTAGGCTCTCTTCGTGACTTCTCCAGTCTTTGTTaGGAGAAACAAGTTGACACAGGACTGCACTGGATGATAAATTTT +
Preference number: 6 (lower is better)
Translates to: YQYVLGSLRDFSSLC*EKQVDTGLHWMINF
Trigger: AAAATTTATCATCCAGTGCAGTCCTGTGTCAACTTGTTTCTCCAAACAAAGACTGGAGAAGTCACGAAGAGAGCCTAGCACATACTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373645.3
ENST00000538494.1
ENST00000544128.5
CDS CAA 90 bp TGTTCACTTACCTCAGAACAACAAGCAAAGGACCACCAGCTCACATaGGATATTTTCATTAGTGGAATCACCATTGTTGACAGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: CSLTSEQQAKDHQLT*DIFISGITIVDSSS
Trigger: GGAGGAACTGTCAACAATGGTGATTCCACTAATGAAAATATCCAATGTGAGCTGGTGGTCCTTTGCTTGTTGTTCTGAGGTAAGTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441657.1
CDS CAA 72 bp CAGGGATTTGGTATTTGCTCAGTGAAGCCCACAAGTTaGCAAGCCCATCTCATTAAATGGAGTTTCAAGTTT +
Preference number: 6 (lower is better)
Translates to: QGFGICSVKPTS*QAHLIKWSFKF
Trigger: AAACTTGAAACTCCATTTAATGAGATGGGCTTGCAAACTTGTGGGCTTCACTGAGCAAATACCAAATCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544128.5
CDS CAA 90 bp ACCATCCTTCAGGGATTTGGTATTTGCTCAGTGAAGCCCACAAGTTaGCAAGCCCATCTCATTAAATGGAGTTTCAAGTTTACTTTTCAG +
Preference number: 6 (lower is better)
Translates to: TILQGFGICSVKPTS*QAHLIKWSFKFTFQ
Trigger: CTGAAAAGTAAACTTGAAACTCCATTTAATGAGATGGGCTTGCAAACTTGTGGGCTTCACTGAGCAAATACCAAATCCCTGAAGGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544128.5
CDS CAA 72 bp TCATTAAATGGAGTTTCAAGTTTACTTTTCAGCATCTaGCTGGTAAGCATGAACAGACTACAACAGACCACA +
Preference number: 6 (lower is better)
Translates to: SLNGVSSLLFSI*LVSMNRLQQTT
Trigger: TGTGGTCTGTTGTAGTCTGTTCATGCTTACCAGCAAGATGCTGAAAAGTAAACTTGAAACTCCATTTAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544128.5