Pregenerated sensors for SOCS3 (Homo sapiens)
Ensembl gene IDs: ENSG00000184557Ensembl transcript IDs: ENST00000330871.3, ENST00000587578.1
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGGCTCTCAGGCACCAGGTAGACTTTGGAACCTGTGTTTTCGGTaGCTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: LGSQAPGRLWNLCFR*LSRRRGCGVPGWFP Trigger: AGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTCACCGAAAACACAGGTTCCAAAGTCTACCTGGTGCCTGAGAGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR TCA 90 bp | CTCCATCCTCCCGCTCCATCCACCCAGGTACAGGAAGGTATAGTATaGGTAGGAAAAGGAGACCAGCTGACCAGCCCATCCATCCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: LHPPAPSTQVQEGIV*VGKGDQLTSPSIPS Trigger: GGAGGGGATGGATGGGCTGGTCAGCTGGTCTCCTTTTCCTACTCATACTATACCTTCCTGTACCTGGGTGGATGGAGCGGGAGGATGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR CCA 90 bp | ACTTTGGAACCTGTGTTTTCGGTGACTGTCCCGGAGGAGAGGATGTaGGGTACCAGGATGGTTCCCTTCAGGTCACCCCAAGCCCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: TLEPVFSVTVPEERM*GTRMVPFRSPQALL Trigger: GAGAAGGGCTTGGGGTGACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTCACCGAAAACACAGGTTCCAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR TCA 90 bp | TCCCGAAGTGTCCCCTGTTTGGAGGCAGAGGGGAAGCTGAGGAATTaGAGGAGAATCCACTTGTGGTTGCTATCGTCCCACCAGGACAGC | + |
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Preference number: 1 (lower is better) Translates to: SRSVPCLEAEGKLRN*RRIHLWLLSSHQDS Trigger: GCTGTCCTGGTGGGACGATAGCAACCACAAGTGGATTCTCCTTCAATTCCTCAGCTTCCCCTCTGCCTCCAAACAGGGGACACTTCGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR TCA 90 bp | TTCAGCATTCCCGAAGTGTCCCCTGTTTGGAGGCAGAGGGGAAGCTaGGGAATTGAAGGAGAATCCACTTGTGGTTGCTATCGTCCCACC | + |
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Preference number: 1 (lower is better) Translates to: FSIPEVSPVWRQRGS*GIEGESTCGCYRPT Trigger: GGTGGGACGATAGCAACCACAAGTGGATTCTCCTTCAATTCCTCAGCTTCCCCTCTGCCTCCAAACAGGGGACACTTCGGGAATGCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR CCA 90 bp | AAATCAAAGAGCAAACAAGTTCCGTTGGAAAGTTTGAAGATTCCCTaGCAGTTCTCATTAGTTCAGCATTCCCGAAGTGTCCCCTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: KSKSKQVPLESLKIP*QFSLVQHSRSVPCL Trigger: CAAACAGGGGACACTTCGGGAATGCTGAACTAATGAGAACTGCCAGGGAATCTTCAAACTTTCCAACGGAACTTGTTTGCTCTTTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR GCA 90 bp | GGTGACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCCCCTCTCCCGACCCATaGCCTTTGCGCCCTTTACCC | + |
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Preference number: 2 (lower is better) Translates to: GDCPGGEDVGYQDGSLQVPSPDP*PLRPLP Trigger: GGGTAAAGGGCGCAAAGGGCATGGGTCGGGAGAGGG...GACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR GCA 90 bp | GGTGACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCTGTGCTTGTGCCATGTaGCACGGAGGAGAGGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: GDCPGGEDVGYQDGSLQVCACAM*HGGEGP Trigger: AGGCCCCTCTCCTCCGTGGCACATGGCACAAGCACA...GACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR GCA 90 bp | GACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCACCCATTCCAGGTCCGCCTaGCACATTCTGCAGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: DCPGGEDVGYQDGSLQVTHSRSA*HILQGE Trigger: CTCTCCCTGCAGAATGTGGCAGGCGGACCTGGAATG...GGTGACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR CCA 90 bp | GACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCACCCTCCTCCGGAGAAGCTaGAGACTCAGGTGGTACTCC | + |
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Preference number: 2 (lower is better) Translates to: DCPGGEDVGYQDGSLQVTLLRRS*RLRWYS Trigger: GGAGTACCACCTGAGTCTCCAGCTTCTCCGGAGGAG...GGTGACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR CCA 90 bp | GTGACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCAAGCTGGAGACTCAGGTaGTACTCCCCCTTCCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: VTVPEERMWGTRMVPFRSSWRLR*YSPFPP Trigger: TGGAGGGAAGGGGGAGTACCACCTGAGTCTCCAGCT...TGACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR CCA 90 bp | GTGACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCAGGACTCTCTCCTGGTTaGCTTCTTGTGCTTGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: VTVPEERMWGTRMVPFRSGLSPG*LLVLVP Trigger: TGGCACAAGCACAAGAAGCCAACCAGGAGAGAGTCC...TGACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR CCA 90 bp | GGTGACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCAGGAGAATCCACTTGTaGTTGCTATCGTCCCACCAG | + |
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Preference number: 2 (lower is better) Translates to: GDCPGGEDVGYQDGSLQVRRIHL*LLSSHQ Trigger: CTGGTGGGACGATAGCAACCACAAGTGGATTCTCCT...GACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR GCA 90 bp | TGTCTTCTCTACCAGGAGCCTGAGGTGAAAGATGTCCCGTCTCCTCCATCCTCCGGCTTCTTGTGCTTGTaGCATGTGCCACGGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: CLLYQEPEVKDVPSPPSSGFLCL*HVPRRR Trigger: TCTCCTCCGTGGCACATGGCACAAGCACAAGAAGCC...GGAGGATGGAGGAGACGGGACATCTTTCACCTCAGGCTCCTGGTAGAGAAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR CAA 90 bp | TTCCCGAAGTGTCCCCTGTTTGGAGGCAGAGGGGAAGCTGAGGAATaGAAGGAGAATCCACTTGTGGTTGCTATCGTCCCACCAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: FPKCPLFGGRGEAEE*KENPLVVAIVPPGQ Trigger: CTGTCCTGGTGGGACGATAGCAACCACAAGTGGATTCTCCTTCAATTCCTCAGCTTCCCCTCTGCCTCCAAACAGGGGACACTTCGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR CCA 90 bp | TTAGCCAGACATAGTCAGGAGGCACAGAGTAGAATCCCCTGTCTTCTCTACCAGTGTGGGGTACCAGGATaGTTCCCTTCAGGTCACCCC | + |
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Preference number: 2 (lower is better) Translates to: LARHSQEAQSRIPCLLYQCGVPG*FPSGHP Trigger: GGGGTGACCTGAAGGGAACCATCCTGGTACCCCACA...CTGGTAGAGAAGACAGGGGATTCTACTCTGTGCCTCCTGACTATGTCTGGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR GCA 90 bp | TTAGCCAGACATAGTCAGGAGGCACAGAGTAGAATCCCCTGTCTTCTCTACCAGCTGGTTGGCTTCTTGTaGTTGTGCCATGTGCCACGG | + |
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Preference number: 2 (lower is better) Translates to: LARHSQEAQSRIPCLLYQLVGFL*LCHVPR Trigger: CCGTGGCACATGGCACAAGCACAAGAAGCCAACCAG...CTGGTAGAGAAGACAGGGGATTCTACTCTGTGCCTCCTGACTATGTCTGGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTCTCTACCAGGAGCCTGAGGTGAAAGATGTCCCGTCTCCTCCATCCTCCAGTTTGAAGATTCCCTaGCAGTTCTCATTAGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: CLLYQEPEVKDVPSPPSSSLKIP*QFSLVQ Trigger: CTGAACTAATGAGAACTGCCAGGGAATCTTCAAACT...GGAGGATGGAGGAGACGGGACATCTTTCACCTCAGGCTCCTGGTAGAGAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR TCA 90 bp | TTAGCCAGACATAGTCAGGAGGCACAGAGTAGAATCCCCTGTCTTCTCTACCAGCAGGAAGGTATAGTATaGGTAGGAAAAGGAGACCAG | + |
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Preference number: 2 (lower is better) Translates to: LARHSQEAQSRIPCLLYQQEGIV*VGKGDQ Trigger: CTGGTCTCCTTTTCCTACTCATACTATACCTTCCTG...CTGGTAGAGAAGACAGGGGATTCTACTCTGTGCCTCCTGACTATGTCTGGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR CCA 72 bp | GGGGGTGTGACCATTTCCTTCGCCAGCCCGCAGCCCTaGGGCCCTCAGGACCTCTCTCTCTTCCACCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: GGVTISFASPQP*GPQDLSLFHLS Trigger: GGAAAGGTGGAAGAGAGAGAGGTCCTGAGGGCCCCAGGGCTGCGGGCTGGCGAAGGAAATGGTCACACCCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR CAA 90 bp | CCAAGCCCTTCTCCCCGGAGCCAGGGAGAGGAGCATGTCACCAGGATCCTCGCCAGGACTCTCTCCTGGTaGGCTTCTTGTGCTTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: PSPSPRSQGEEHVTRILARTLSW*ASCACA Trigger: GGCACAAGCACAAGAAGCCAACCAGGAGAGAGTCCT...GGCGAGGATCCTGGTGACATGCTCCTCTCCCTGGCTCCGGGGAGAAGGGCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR CCA 72 bp | TCGTCCCACCAGGACAGCTGGCTCCTCCGGAGAAGCTaGAGACTCAGGTGGTACTCCCCCTTCCCTCCAACA | + |
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Preference number: 3 (lower is better) Translates to: SSHQDSWLLRRS*RLRWYSPFPPT Trigger: TGTTGGAGGGAAGGGGGAGTACCACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCCTGGTGGGACGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR GCA 72 bp | CCAGAGCTACAGGACTCTCTCCTGGTTGGCTTCTTGTaGTTGTGCCATGTGCCACGGAGGAGAGGGGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: PELQDSLLVGFL*LCHVPRRRGAC Trigger: GCAGGCCCCTCTCCTCCGTGGCACATGGCACAAGCACAAGAAGCCAACCAGGAGAGAGTCCTGTAGCTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR CAA 90 bp | CCCCAAGCCCTTCTCCCCGGAGCCAGGGAGAGGAGCATGTCACCAGGATCCTCGGTTCCGTTGGAAAGTTaGAAGATTCCCTGGCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: PQALLPGARERSMSPGSSVPLES*KIPWQF Trigger: GAACTGCCAGGGAATCTTCAAACTTTCCAACGGAAC...CGAGGATCCTGGTGACATGCTCCTCTCCCTGGCTCCGGGGAGAAGGGCTTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR CCA 72 bp | ATCCACTTGTGGTTGCTATCGTCCCACCAGGACAGCTaGCTCCTCCGGAGAAGCTGGAGACTCAGGTGGTAC | + |
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Preference number: 3 (lower is better) Translates to: IHLWLLSSHQDS*LLRRSWRLRWY Trigger: GTACCACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCCTGGTGGGACGATAGCAACCACAAGTGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR TCA 72 bp | CAGGCACCAGGTAGACTTTGGAACCTGTGTTTTCGGTaGCTGTCCCGGAGGAGAGGATGTGGGGTACCAGGA | + |
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Preference number: 3 (lower is better) Translates to: QAPGRLWNLCFR*LSRRRGCGVPG Trigger: TCCTGGTACCCCACATCCTCTCCTCCGGGACAGTCACCGAAAACACAGGTTCCAAAGTCTACCTGGTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR CAA 90 bp | TGTCTTCTCTACCAGGAGCCTGAGGTGAAAGATGTCCCGTCTCCTCCATCCTCCCTCCTGGTTGGCTTCTaGTGCTTGTGCCATGTGCCA | + |
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Preference number: 3 (lower is better) Translates to: CLLYQEPEVKDVPSPPSSLLVGF*CLCHVP Trigger: TGGCACATGGCACAAGCACAAGAAGCCAACCAGGAG...GGAGGATGGAGGAGACGGGACATCTTTCACCTCAGGCTCCTGGTAGAGAAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR TCA 72 bp | CCCGCTCCATCCACCCAGGTACAGGAAGGTATAGTATaGGTAGGAAAAGGAGACCAGCTGACCAGCCCATCC | + |
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Preference number: 3 (lower is better) Translates to: PAPSTQVQEGIV*VGKGDQLTSPS Trigger: GGATGGGCTGGTCAGCTGGTCTCCTTTTCCTACTCATACTATACCTTCCTGTACCTGGGTGGATGGAGCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR CAA 90 bp | CAAACAAGTTCCGTTGGAAAGTTTGAAGATTCCCTGGCAGTTCTCATTAGTTCACGAAGTGTCCCCTGTTaGGAGGCAGAGGGGAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: QTSSVGKFEDSLAVLISSRSVPC*EAEGKL Trigger: CAGCTTCCCCTCTGCCTCCAAACAGGGGACACTTCG...TGAACTAATGAGAACTGCCAGGGAATCTTCAAACTTTCCAACGGAACTTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR-3UTR CAA 90 bp | TTAGCCAGACATAGTCAGGAGGCACAGAGTAGAATCCCCTGTCTTCTCTACCAGAGCAAACAAGTTCCGTaGGAAAGTTTGAAGATTCCC | + |
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Preference number: 3 (lower is better) Translates to: LARHSQEAQSRIPCLLYQSKQVP*ESLKIP Trigger: GGGAATCTTCAAACTTTCCAACGGAACTTGTTTGCT...CTGGTAGAGAAGACAGGGGATTCTACTCTGTGCCTCCTGACTATGTCTGGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR CCA 72 bp | AGCAAACAAGTTCCGTTGGAAAGTTTGAAGATTCCCTaGCAGTTCTCATTAGTTCAGCATTCCCGAAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: SKQVPLESLKIP*QFSLVQHSRSV Trigger: GACACTTCGGGAATGCTGAACTAATGAGAACTGCCAGGGAATCTTCAAACTTTCCAACGGAACTTGTTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR GCA 90 bp | CCCCAAGCCCTTCTCCCCGGAGCCAGGGAGAGGAGCATGTCACCAGGATCCTCGGGCGGCGGCTGCAGCTaGTTCGCGGCCTCCGCACAG | + |
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Preference number: 4 (lower is better) Translates to: PQALLPGARERSMSPGSSGGGCS*FAASAQ Trigger: CTGTGCGGAGGCCGCGAAGCAGCTGCAGCCGCCGCC...CGAGGATCCTGGTGACATGCTCCTCTCCCTGGCTCCGGGGAGAAGGGCTTGGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | CCAAGCCCTTCTCCCCGGAGCCAGGGAGAGGAGCATGTCACCAGGATCCTCGCCCGAGACGGCCAGCGGTaGCCCGCGCTGCGCCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: PSPSPRSQGEEHVTRILARDGQR*PALRPD Trigger: ATCTGGGCGCAGCGCGGGCCACCGCTGGCCGTCTCG...GGCGAGGATCCTGGTGACATGCTCCTCTCCCTGGCTCCGGGGAGAAGGGCTTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | CCAAGCCCTTCTCCCCGGAGCCAGGGAGAGGAGCATGTCACCAGGATCCTCGCCCGCACGGAGCCAGCGTaGATCTGCGCGGCGGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: PSPSPRSQGEEHVTRILARTEPA*ICAAAA Trigger: AGCCGCCGCCGCGCAGATCCACGCTGGCTCCGTGCG...GGCGAGGATCCTGGTGACATGCTCCTCTCCCTGGCTCCGGGGAGAAGGGCTTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR GCA 90 bp | CCAAGCCCTTCTCCCCGGAGCCAGGGAGAGGAGCATGTCACCAGGATCCTCGCCCTCGCCGCCGGTCACTaGGCTCCAGTAGAAGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: PSPSPRSQGEEHVTRILALAAGH*APVEAA Trigger: AGCGGCTTCTACTGGAGCGCAGTGACCGGCGGCGAG...GGCGAGGATCCTGGTGACATGCTCCTCTCCCTGGCTCCGGGGAGAAGGGCTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR GCA 90 bp | GACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCACCGGGGCACGGGCTGCGTaGTCCGGGGATCGCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: DCPGGEDVGYQDGSLQVTGARAA*SGDRSA Trigger: TGCAGAGCGATCCCCGGAGCACGCAGCCCGTGCCCC...GGTGACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | TGCTATCGTCCCACCAGGACAGCTGGCTCCTCCGGAGAAGCTGGAGACTCAGGTGCCAGCCCGCAGCCCTaGGGCCCTCAGGACCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: CYRPTRTAGSSGEAGDSGASPQP*GPQDLS Trigger: AGAGAGGTCCTGAGGGCCCCAGGGCTGCGGGCTGGC...ACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCCTGGTGGGACGATAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR TCA 90 bp | CCCCAAGCCCTTCTCCCCGGAGCCAGGGAGAGGAGCATGTCACCAGGATCCTCGGAAACTTGCTGTGGGTaGCCATGGCGCACGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: PQALLPGARERSMSPGSSETCCG*PWRTEP Trigger: TGGCTCCGTGCGCCATGGTCACCCACAGCAAGTTTC...CGAGGATCCTGGTGACATGCTCCTCTCCCTGGCTCCGGGGAGAAGGGCTTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR GCA 90 bp | GTGACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCAAAGCGGGGCACGGGCTaGGTGCTCCGGGGATCGCTC | + |
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Preference number: 4 (lower is better) Translates to: VTVPEERMWGTRMVPFRSKRGTG*VLRGSL Trigger: GAGCGATCCCCGGAGCACGCAGCCCGTGCCCCGCTT...TGACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | GTGACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCACTCCCAGGGAGTGGCTaGGCAGACGGCTGCTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: VTVPEERMWGTRMVPFRSLPGSG*ADGCSG Trigger: GCCCGAGCAGCCGTCTGCCCAGCCACTCCCTGGGAG...TGACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | GGTGACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCGGGACTCCCAGGGAGTaGCTGGGCAGACGGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GDCPGGEDVGYQDGSLQVGTPRE*LGRRLL Trigger: GAGCAGCCGTCTGCCCAGCCACTCCCTGGGAGTCCC...GACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR GCA 90 bp | TGTCTTCTCTACCAGGAGCCTGAGGTGAAAGATGTCCCGTCTCCTCCATCCTCCAGCGGTGGCCCGCGCTaGGCCCAGATGTTGGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: CLLYQEPEVKDVPSPPSSSGGPR*AQMLAA Trigger: GGCCGCCAACATCTGGGCGCAGCGCGGGCCACCGCT...GGAGGATGGAGGAGACGGGACATCTTTCACCTCAGGCTCCTGGTAGAGAAGACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR GCA 90 bp | GGACAGCTGGCTCCTCCGGAGAAGCTGGAGACTCAGGTGGTACTCCCCCTTCCCCGCTCTCCTGCAGCTTaGGCACTGCGTTCACCACCA | + |
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Preference number: 4 (lower is better) Translates to: GQLAPPEKLETQVVLPLPRSPAA*ALRSPP Trigger: TGGTGGTGAACGCAGTGCGCAAGCTGCAGGAGAGCG...GGGAAGGGGGAGTACCACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | GGACAGCTGGCTCCTCCGGAGAAGCTGGAGACTCAGGTGGTACTCCCCCTTCCCGCGGGAAACTTGCTGTaGGTGACCATGGCGCACGGA | + |
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Preference number: 4 (lower is better) Translates to: GQLAPPEKLETQVVLPLPAGNLL*VTMAHG Trigger: TCCGTGCGCCATGGTCACCCACAGCAAGTTTCCCGC...GGGAAGGGGGAGTACCACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | GGACAGCTGGCTCCTCCGGAGAAGCTGGAGACTCAGGTGGTACTCCCCCTTCCCGTGAAGAAGTGGCGCTaGTCCGAGCTGTCGCGGATC | + |
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Preference number: 4 (lower is better) Translates to: GQLAPPEKLETQVVLPLPVKKWR*SELSRI Trigger: GATCCGCGACAGCTCGGACCAGCGCCACTTCTTCAC...GGGAAGGGGGAGTACCACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | CCCCAAGCCCTTCTCCCCGGAGCCAGGGAGAGGAGCATGTCACCAGGATCCTCGAGCGGGGCATCGTACTaGTCCAGGAACTCCCGAATG | + |
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Preference number: 4 (lower is better) Translates to: PQALLPGARERSMSPGSSSGASY*SRNSRM Trigger: CATTCGGGAGTTCCTGGACCAGTACGATGCCCCGCT...CGAGGATCCTGGTGACATGCTCCTCTCCCTGGCTCCGGGGAGAAGGGCTTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | CCCCAAGCCCTTCTCCCCGGAGCCAGGGAGAGGAGCATGTCACCAGGATCCTCGTGTGGGGTACCAGGATaGTTCCCTTCAGGTCACCCC | + |
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Preference number: 4 (lower is better) Translates to: PQALLPGARERSMSPGSSCGVPG*FPSGHP Trigger: GGGGTGACCTGAAGGGAACCATCCTGGTACCCCACA...CGAGGATCCTGGTGACATGCTCCTCTCCCTGGCTCCGGGGAGAAGGGCTTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR TCA 90 bp | GACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCACCAGTGGTGCACCAGCTTaGGCACGCAGTCGAAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: DCPGGEDVGYQDGSLQVTSGAPA*ARSRSG Trigger: CCCGCTTCGACTGCGTGCTCAAGCTGGTGCACCACT...GGTGACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR GCA 90 bp | ATCGTCCCACCAGGACAGCTGGCTCCTCCGGAGAAGCTGGAGACTCAGGTGGTACCCTCTCCCGACCCATaGCCTTTGCGCCCTTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: IVPPGQLAPPEKLETQVVPSPDP*PLRPLP Trigger: GGGTAAAGGGCGCAAAGGGCATGGGTCGGGAGAGGG...TACCACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCCTGGTGGGACGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | GGACAGCTGGCTCCTCCGGAGAAGCTGGAGACTCAGGTGGTACTCCCCCTTCCCGCGTTCACCACCAGCTaGTACTCGCTCTTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQLAPPEKLETQVVLPLPAFTTS*YSLLEL Trigger: CAGCTCCAAGAGCGAGTACCAGCTGGTGGTGAACGC...GGGAAGGGGGAGTACCACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | ATCGTCCCACCAGGACAGCTGGCTCCTCCGGAGAAGCTGGAGACTCAGGTGGTAGAAGAGTGGCCACGTTaGAGGAGAGGGGCCGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IVPPGQLAPPEKLETQVVEEWPR*RRGAGS Trigger: TGAGCCGGCCCCTCTCCTCCAACGTGGCCACTCTTC...TACCACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCCTGGTGGGACGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR CAA 72 bp | CCCCCAGAGCTACAGGACTCTCTCCTGGTTGGCTTCTaGTGCTTGTGCCATGTGCCACGGAGGAGAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: PPELQDSLLVGF*CLCHVPRRRGA Trigger: GGCCCCTCTCCTCCGTGGCACATGGCACAAGCACAAGAAGCCAACCAGGAGAGAGTCCTGTAGCTCTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR GCA 90 bp | TGCTATCGTCCCACCAGGACAGCTGGCTCCTCCGGAGAAGCTGGAGACTCAGGTCCCCCTCACACTGGATaGGCAGGTTCTTGGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CYRPTRTAGSSGEAGDSGPPHTG*AGSWSQ Trigger: CTGGGACCAAGAACCTGCGCATCCAGTGTGAGGGGG...ACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCCTGGTGGGACGATAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR GCA 90 bp | GGACAGCTGGCTCCTCCGGAGAAGCTGGAGACTCAGGTGGTACTCCCCCTTCCCCTGGTTGGCTTCTTGTaGTTGTGCCATGTGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GQLAPPEKLETQVVLPLPLVGFL*LCHVPR Trigger: CCGTGGCACATGGCACAAGCACAAGAAGCCAACCAG...GGGAAGGGGGAGTACCACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | TGCTATCGTCCCACCAGGACAGCTGGCTCCTCCGGAGAAGCTGGAGACTCAGGTCTGAGCGTGAAGAAGTaGCGCTGGTCCGAGCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: CYRPTRTAGSSGEAGDSGLSVKK*RWSELS Trigger: CGACAGCTCGGACCAGCGCCACTTCTTCACGCTCAG...ACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCCTGGTGGGACGATAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR GCA 90 bp | CCCCAAGCCCTTCTCCCCGGAGCCAGGGAGAGGAGCATGTCACCAGGATCCTCGGAATCCACTTGTGGTTaGTATCGTCCCACCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PQALLPGARERSMSPGSSESTCG*YRPTRT Trigger: TGTCCTGGTGGGACGATAGCAACCACAAGTGGATTC...CGAGGATCCTGGTGACATGCTCCTCTCCCTGGCTCCGGGGAGAAGGGCTTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | TGTCTTCTCTACCAGGAGCCTGAGGTGAAAGATGTCCCGTCTCCTCCATCCTCCGGAGGGTTCAGTAGGTaGCGAGGGGAAGGAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLLYQEPEVKDVPSPPSSGGFSR*RGEGGG Trigger: GCCCCCTCCTTCCCCTCGCCACCTACTGAACCCTCC...GGAGGATGGAGGAGACGGGACATCTTTCACCTCAGGCTCCTGGTAGAGAAGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | GGTGACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCAGCTGGAGACTCAGGTaGTACTCCCCCTTCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GDCPGGEDVGYQDGSLQVSWRLR*YSPFPP Trigger: TGGAGGGAAGGGGGAGTACCACCTGAGTCTCCAGCT...GACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR TCA 90 bp | TGCTATCGTCCCACCAGGACAGCTGGCTCCTCCGGAGAAGCTGGAGACTCAGGTTTCCGACAGAGATGCTaGAGAGTGGCCACGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CYRPTRTAGSSGEAGDSGFRQRC*RVATLE Trigger: CTCCAACGTGGCCACTCTTCAGCATCTCTGTCGGAA...ACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCCTGGTGGGACGATAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR TCA 90 bp | GTGACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCAAGTCCAGGTGGCCGTTaGCGGTCTTCCGACAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VTVPEERMWGTRMVPFRSSPGGR*RSSDRD Trigger: ATCTCTGTCGGAAGACCGTCAACGGCCACCTGGACT...TGACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR GCA 90 bp | TTAGCCAGACATAGTCAGGAGGCACAGAGTAGAATCCCCTGTCTTCTCTACCAGGAGCCAGCGTGGATCTaGGCGGCGGCGGCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LARHSQEAQSRIPCLLYQEPAWI*AAAAAA Trigger: AGCTGCAGCCGCCGCCGCGCAGATCCACGCTGGCTC...CTGGTAGAGAAGACAGGGGATTCTACTCTGTGCCTCCTGACTATGTCTGGCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR GCA 90 bp | GTGACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCACTGCAGCTTGCGCACTaGGTTCACCACCAGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VTVPEERMWGTRMVPFRSLQLAH*VHHQLV Trigger: TACCAGCTGGTGGTGAACGCAGTGCGCAAGCTGCAG...TGACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR GCA 90 bp | GGTGACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCCCGACCCATGCCCTTTaGGCCCTTTACCCCTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GDCPGGEDVGYQDGSLQVPTHAL*ALYPLK Trigger: CTTTAAGGGGTAAAGGGCGCAAAGGGCATGGGTCGG...GACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR GCA 90 bp | GACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCACCGGCTTCTTGTGCTTGTaGCATGTGCCACGGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DCPGGEDVGYQDGSLQVTGFLCL*HVPRRR Trigger: TCTCCTCCGTGGCACATGGCACAAGCACAAGAAGCC...GGTGACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | GACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCACCAGAGATGCTGAAGAGTaGCCACGTTGGAGGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DCPGGEDVGYQDGSLQVTRDAEE*PRWRRG Trigger: CCCTCTCCTCCAACGTGGCCACTCTTCAGCATCTCT...GGTGACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | TGTCTTCTCTACCAGGAGCCTGAGGTGAAAGATGTCCCGTCTCCTCCATCCTCCTCCCACCAGGACAGCTaGCTCCTCCGGAGAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLLYQEPEVKDVPSPPSSSHQDS*LLRRSW Trigger: CCAGCTTCTCCGGAGGAGCCAGCTGTCCTGGTGGGA...GGAGGATGGAGGAGACGGGACATCTTTCACCTCAGGCTCCTGGTAGAGAAGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR TCA 90 bp | TGCTATCGTCCCACCAGGACAGCTGGCTCCTCCGGAGAAGCTGGAGACTCAGGTAGGCAGAGGGGAAGCTaGGGAATTGAAGGAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: CYRPTRTAGSSGEAGDSGRQRGS*GIEGES Trigger: GGATTCTCCTTCAATTCCTCAGCTTCCCCTCTGCCT...ACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCCTGGTGGGACGATAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR TCA 90 bp | CCAAGCCCTTCTCCCCGGAGCCAGGGAGAGGAGCATGTCACCAGGATCCTCGCCTTCCGTTGGAAAGTTTaGAGATTCCCTGGCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPSPRSQGEEHVTRILAFRWKV*RFPGSS Trigger: AGAACTGCCAGGGAATCTTCAAACTTTCCAACGGAA...GGCGAGGATCCTGGTGACATGCTCCTCTCCCTGGCTCCGGGGAGAAGGGCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR TCA 90 bp | CCAAGCCCTTCTCCCCGGAGCCAGGGAGAGGAGCATGTCACCAGGATCCTCGCCCAGGAAGGTATAGTATaGGTAGGAAAAGGAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSPSPRSQGEEHVTRILAQEGIV*VGKGDQ Trigger: CTGGTCTCCTTTTCCTACTCATACTATACCTTCCTG...GGCGAGGATCCTGGTGACATGCTCCTCTCCCTGGCTCCGGGGAGAAGGGCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR GCA 90 bp | TGTCTTCTCTACCAGGAGCCTGAGGTGAAAGATGTCCCGTCTCCTCCATCCTCCCATTCCAGGTCCGCCTaGCACATTCTGCAGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLLYQEPEVKDVPSPPSSHSRSA*HILQGE Trigger: CTCTCCCTGCAGAATGTGGCAGGCGGACCTGGAATG...GGAGGATGGAGGAGACGGGACATCTTTCACCTCAGGCTCCTGGTAGAGAAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR TCA 90 bp | TGTCTTCTCTACCAGGAGCCTGAGGTGAAAGATGTCCCGTCTCCTCCATCCTCCAGATGTTGGCGGCCGTaGAGTCCACAAAGGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLLYQEPEVKDVPSPPSSRCWRP*SPQRSL Trigger: AAGGCTCCTTTGTGGACTTCACGGCCGCCAACATCT...GGAGGATGGAGGAGACGGGACATCTTTCACCTCAGGCTCCTGGTAGAGAAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | TGTCTTCTCTACCAGGAGCCTGAGGTGAAAGATGTCCCGTCTCCTCCATCCTCCTTCTTGGTCCCAGACTaGGTCTTGACGCTGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLLYQEPEVKDVPSPPSSFLVPD*VLTLSV Trigger: CACGCTCAGCGTCAAGACCCAGTCTGGGACCAAGAA...GGAGGATGGAGGAGACGGGACATCTTTCACCTCAGGCTCCTGGTAGAGAAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | TTAGCCAGACATAGTCAGGAGGCACAGAGTAGAATCCCCTGTCTTCTCTACCAGACGGAGGAAGGGCCCTaGGCTCTCAGGCACCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LARHSQEAQSRIPCLLYQTEEGP*ALRHQV Trigger: TACCTGGTGCCTGAGAGCCCAGGGCCCTTCCTCCGT...CTGGTAGAGAAGACAGGGGATTCTACTCTGTGCCTCCTGACTATGTCTGGCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR GCA 90 bp | TTAGCCAGACATAGTCAGGAGGCACAGAGTAGAATCCCCTGTCTTCTCTACCAGTCTGCAGAGAGAAGCTaGCCCCCTCACACTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LARHSQEAQSRIPCLLYQSAERS*PPHTGC Trigger: GCATCCAGTGTGAGGGGGGCAGCTTCTCTCTGCAGA...CTGGTAGAGAAGACAGGGGATTCTACTCTGTGCCTCCTGACTATGTCTGGCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | CAAACAAGTTCCGTTGGAAAGTTTGAAGATTCCCTGGCAGTTCTCATTAGTTCACGGGAGCACCCGGGGTaGCAGCAGTCCAGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTSSVGKFEDSLAVLISSREHPG*QQSSLS Trigger: GGAGAGGCTGGACTGCTGCCACCCCGGGTGCTCCCG...TGAACTAATGAGAACTGCCAGGGAATCTTCAAACTTTCCAACGGAACTTGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | TTAGCCAGACATAGTCAGGAGGCACAGAGTAGAATCCCCTGTCTTCTCTACCAGTGTAATAGGCTCTTCTaGGGGGACTCCCAGGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LARHSQEAQSRIPCLLYQCNRLF*GDSQGV Trigger: CACTCCCTGGGAGTCCCCCCAGAAGAGCCTATTACA...CTGGTAGAGAAGACAGGGGATTCTACTCTGTGCCTCCTGACTATGTCTGGCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | TGCTATCGTCCCACCAGGACAGCTGGCTCCTCCGGAGAAGCTGGAGACTCAGGTAGTTTGAAGATTCCCTaGCAGTTCTCATTAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CYRPTRTAGSSGEAGDSGSLKIP*QFSLVQ Trigger: CTGAACTAATGAGAACTGCCAGGGAATCTTCAAACT...ACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCCTGGTGGGACGATAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR TCA 90 bp | CAAACAAGTTCCGTTGGAAAGTTTGAAGATTCCCTGGCAGTTCTCATTAGTTCAGCCCCGGCAGCTGGGTaGCTTTCTCATAGGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTSSVGKFEDSLAVLISSAPAAG*LSHRSP Trigger: TGGACTCCTATGAGAAAGTCACCCAGCTGCCGGGGC...TGAACTAATGAGAACTGCCAGGGAATCTTCAAACTTTCCAACGGAACTTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR TCA 90 bp | CAAACAAGTTCCGTTGGAAAGTTTGAAGATTCCCTGGCAGTTCTCATTAGTTCAGAAAAGGAGACCAGCTaGCCAGCCCATCCATCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTSSVGKFEDSLAVLISSEKETS*PAHPSP Trigger: AGGGGATGGATGGGCTGGTCAGCTGGTCTCCTTTTC...TGAACTAATGAGAACTGCCAGGGAATCTTCAAACTTTCCAACGGAACTTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | GGAAAGTTTGAAGATTCCCTGGCAGTTCTCATTAGTTCAGCATTCCCGAAGTGTGGACTCTCTCCTGGTTaGCTTCTTGTGCTTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKFEDSLAVLISSAFPKCGLSPG*LLVLVP Trigger: TGGCACAAGCACAAGAAGCCAACCAGGAGAGAGTCC...ACACTTCGGGAATGCTGAACTAATGAGAACTGCCAGGGAATCTTCAAACTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR TCA 90 bp | CAAACAAGTTCCGTTGGAAAGTTTGAAGATTCCCTGGCAGTTCTCATTAGTTCAAACCTGTGTTTTCGGTaGCTGTCCCGGAGGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTSSVGKFEDSLAVLISSNLCFR*LSRRRG Trigger: TCCTCTCCTCCGGGACAGTCACCGAAAACACAGGTT...TGAACTAATGAGAACTGCCAGGGAATCTTCAAACTTTCCAACGGAACTTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CCA 90 bp | GGAAAGTTTGAAGATTCCCTGGCAGTTCTCATTAGTTCAGCATTCCCGAAGTGTAGGAGAATCCACTTGTaGTTGCTATCGTCCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKFEDSLAVLISSAFPKCRRIHL*LLSSHQ Trigger: CTGGTGGGACGATAGCAACCACAAGTGGATTCTCCT...ACACTTCGGGAATGCTGAACTAATGAGAACTGCCAGGGAATCTTCAAACTTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| 3UTR CAA 72 bp | ACCAAATCAAAGAGCAAACAAGTTCCGTTGGAAAGTTaGAAGATTCCCTGGCAGTTCTCATTAGTTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKSKSKQVPLES*KIPWQFSLVQH Trigger: ATGCTGAACTAATGAGAACTGCCAGGGAATCTTCAAACTTTCCAACGGAACTTGTTTGCTCTTTGATTTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS GCA 90 bp | CCGCGGCGGGAGCTGGGCCGGGCGGGCGGCTGGCGGCTGGCTGCGTaGGGGGCCGAAGCGGCAGCAGCGGAGCAGGGAGTCCAAGTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: PRRELGRAGGWRLAA*GAEAAAAEQGVQVG Trigger: TCCGACTTGGACTCCCTGCTCCGCTGCTGCCGCTTCGGCCCCGCACGCAGCCAGCCGCCAGCCGCCCGCCCGGCCCAGCTCCCGCCGCGG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330871.3 ENST00000587578.1 |
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| CDS GCA 90 bp | GTGACCATGGCGCACGGAGCCAGCGTGGATCTGCGCGGCGGCGGCTaGAGCTGCTTCGCGGCCTCCGCACAGCGGCCGCTACCGCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: VTMAHGASVDLRGGG*SCFAASAQRPLPHP Trigger: GGGATGCGGTAGCGGCCGCTGTGCGGAGGCCGCGAAGCAGCTGCAGCCGCCGCCGCGCAGATCCACGCTGGCTCCGTGCGCCATGGTCAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CCA 90 bp | CCCCCTCGGGTCCCCAAGGCGACGCGGCGGCGAGACGGCCAGCGGTaGCCCGCGCTGCGCCCAGATGTTGGCGGCCGTGAAGTCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: PPRVPKATRRRDGQR*PALRPDVGGREVHK Trigger: TTTGTGGACTTCACGGCCGCCAACATCTGGGCGCAGCGCGGGCCACCGCTGGCCGTCTCGCCGCCGCGTCGCCTTGGGGACCCGAGGGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS TCA 90 bp | TGTCCAGGGGGCGGCTCATCCCGGCGGCGGGAAACTTGCTGTGGGTaGCCATGGCGCACGGAGCCAGCGTGGATCTGCGCGGCGGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CPGGGSSRRRETCCG*PWRTEPAWICAAAA Trigger: AGCCGCCGCCGCGCAGATCCACGCTGGCTCCGTGCGCCATGGTCACCCACAGCAAGTTTCCCGCCGCCGGGATGAGCCGCCCCCTGGACA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CCA 90 bp | CTGGTGTCCAGGGGGCGGCTCATCCCGGCGGCGGGAAACTTGCTGTaGGTGACCATGGCGCACGGAGCCAGCGTGGATCTGCGCGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVSRGRLIPAAGNLL*VTMAHGASVDLRGG Trigger: GCCGCCGCGCAGATCCACGCTGGCTCCGTGCGCCATGGTCACCCACAGCAAGTTTCCCGCCGCCGGGATGAGCCGCCCCCTGGACACCAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS TCA 90 bp | AGACGGCCAGCGGTGGCCCGCGCTGCGCCCAGATGTTGGCGGCCGTaGAGTCCACAAAGGAGCCTTCGCGCGCGCGTCCCTCGAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRPAVARAAPRCWRP*SPQRSLRARVPRAS Trigger: GGAAGCTCGAGGGACGCGCGCGCGAAGGCTCCTTTGTGGACTTCACGGCCGCCAACATCTGGGCGCAGCGCGGGCCACCGCTGGCCGTCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330871.3 ENST00000587578.1 |
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| CDS GCA 90 bp | CTGCAGCTGCTTCGCGGCGGCGAGACGGCCAGCGGTGGCCCGCGCTaGGCCCAGATGTTGGCGGCCGTGAAGTCCACAAAGGAGCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LQLLRGGETASGGPR*AQMLAAVKSTKEPS Trigger: CGAAGGCTCCTTTGTGGACTTCACGGCCGCCAACATCTGGGCGCAGCGCGGGCCACCGCTGGCCGTCTCGCCGCCGCGAAGCAGCTGCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587578.1 |
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| CDS TCA 90 bp | GGTCCGAGCTGTCGCGGATCAGAAAGGTGCCGGCGGGCTCGGCACTaGGCAGCAGGTTCGCCTCGCCGCCGGTCACTGCGCTCCAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPSCRGSERCRRARH*AAGSPRRRSLRSSR Trigger: TCTACTGGAGCGCAGTGACCGGCGGCGAGGCGAACCTGCTGCTCAGTGCCGAGCCCGCCGGCACCTTTCTGATCCGCGACAGCTCGGACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS GCA 90 bp | GGCGGGCTCGGCACTGAGCAGCAGGTTCGCCTCGCCGCCGGTCACTaGGCTCCAGTAGAAGCCGCTCTCCTGCAGCTTGCGCACTGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GGLGTEQQVRLAAGH*APVEAALLQLAHCV Trigger: AACGCAGTGCGCAAGCTGCAGGAGAGCGGCTTCTACTGGAGCGCAGTGACCGGCGGCGAGGCGAACCTGCTGCTCAGTGCCGAGCCCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CAA 90 bp | CCCCAAGCCCTTCTCCCCGGAGCCAGGGAGAGGAGCATGTCACCAGGATCCTCGCCGGCGGCGGGAAACTaGCTGTGGGTGACCATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PQALLPGARERSMSPGSSPAAGN*LWVTMA Trigger: CGCCATGGTCACCCACAGCAAGTTTCCCGCCGCCGG...CGAGGATCCTGGTGACATGCTCCTCTCCCTGGCTCCGGGGAGAAGGGCTTGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CCA 90 bp | TTGGTCCCAGACTGGGTCTTGACGCTGAGCGTGAAGAAGTGGCGCTaGTCCGAGCTGTCGCGGATCAGAAAGGTGCCGGCGGGCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LVPDWVLTLSVKKWR*SELSRIRKVPAGSA Trigger: TGCCGAGCCCGCCGGCACCTTTCTGATCCGCGACAGCTCGGACCAGCGCCACTTCTTCACGCTCAGCGTCAAGACCCAGTCTGGGACCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CAA 90 bp | CCCCAAGCCCTTCTCCCCGGAGCCAGGGAGAGGAGCATGTCACCAGGATCCTCGGAGTCCAGGTGGCCGTaGACGGTCTTCCGACAGAGA | + |
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Preference number: 5 (lower is better) Translates to: PQALLPGARERSMSPGSSESRWP*TVFRQR Trigger: TCTCTGTCGGAAGACCGTCAACGGCCACCTGGACTC...CGAGGATCCTGGTGACATGCTCCTCTCCCTGGCTCCGGGGAGAAGGGCTTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CCA 90 bp | AGGTTCTTGGTCCCAGACTGGGTCTTGACGCTGAGCGTGAAGAAGTaGCGCTGGTCCGAGCTGTCGCGGATCAGAAAGGTGCCGGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: RFLVPDWVLTLSVKK*RWSELSRIRKVPAG Trigger: GCCCGCCGGCACCTTTCTGATCCGCGACAGCTCGGACCAGCGCCACTTCTTCACGCTCAGCGTCAAGACCCAGTCTGGGACCAAGAACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CAA 90 bp | GTGACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCACCGCTCTCCTGCAGCTaGCGCACTGCGTTCACCACC | + |
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Preference number: 5 (lower is better) Translates to: VTVPEERMWGTRMVPFRSPLSCS*RTAFTT Trigger: GGTGGTGAACGCAGTGCGCAAGCTGCAGGAGAGCGG...TGACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CAA 90 bp | TGTCTTCTCTACCAGGAGCCTGAGGTGAAAGATGTCCCGTCTCCTCCATCCTCCTCGAAGTCTCCGTCCTaGGGGCTGAGCCCCCTCGGG | + |
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Preference number: 5 (lower is better) Translates to: CLLYQEPEVKDVPSPPSSSKSPS*GLSPLG Trigger: CCCGAGGGGGCTCAGCCCCAAGGACGGAGACTTCGA...GGAGGATGGAGGAGACGGGACATCTTTCACCTCAGGCTCCTGGTAGAGAAGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CAA 90 bp | GACTGTCCCGGAGGAGAGGATGTGGGGTACCAGGATGGTTCCCTTCAGGTCACCCGAAGTGTCCCCTGTTaGGAGGCAGAGGGGAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: DCPGGEDVGYQDGSLQVTRSVPC*EAEGKL Trigger: CAGCTTCCCCTCTGCCTCCAAACAGGGGACACTTCG...GGTGACCTGAAGGGAACCATCCTGGTACCCCACATCCTCTCCTCCGGGACAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CAA 90 bp | ATCGTCCCACCAGGACAGCTGGCTCCTCCGGAGAAGCTGGAGACTCAGGTGGTAGTCCCAGACTGGGTCTaGACGCTGAGCGTGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: IVPPGQLAPPEKLETQVVVPDWV*TLSVKK Trigger: CTTCTTCACGCTCAGCGTCAAGACCCAGTCTGGGAC...TACCACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCCTGGTGGGACGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CAA 90 bp | ATCGTCCCACCAGGACAGCTGGCTCCTCCGGAGAAGCTGGAGACTCAGGTGGTAAGCTGGTACTCGCTCTaGGAGCTGAAGGTCTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: IVPPGQLAPPEKLETQVVSWYSL*ELKVLR Trigger: CCTCAAGACCTTCAGCTCCAAGAGCGAGTACCAGCT...TACCACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCCTGGTGGGACGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CAA 90 bp | CCAAGCCCTTCTCCCCGGAGCCAGGGAGAGGAGCATGTCACCAGGATCCTCGCCGTTCCGTTGGAAAGTTaGAAGATTCCCTGGCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: PSPSPRSQGEEHVTRILAVPLES*KIPWQF Trigger: GAACTGCCAGGGAATCTTCAAACTTTCCAACGGAAC...GGCGAGGATCCTGGTGACATGCTCCTCTCCCTGGCTCCGGGGAGAAGGGCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CAA 90 bp | TGCTATCGTCCCACCAGGACAGCTGGCTCCTCCGGAGAAGCTGGAGACTCAGGTAGAATCCACTTGTGGTaGCTATCGTCCCACCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: CYRPTRTAGSSGEAGDSGRIHLW*LSSHQD Trigger: GTCCTGGTGGGACGATAGCAACCACAAGTGGATTCT...ACCTGAGTCTCCAGCTTCTCCGGAGGAGCCAGCTGTCCTGGTGGGACGATAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CAA 90 bp | GGAAAGTTTGAAGATTCCCTGGCAGTTCTCATTAGTTCAGCATTCCCGAAGTGTCCCGACCCATGCCCTTaGCGCCCTTTACCCCTTAAA | + |
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Preference number: 5 (lower is better) Translates to: GKFEDSLAVLISSAFPKCPDPCP*RPLPLK Trigger: TTTAAGGGGTAAAGGGCGCAAAGGGCATGGGTCGGG...ACACTTCGGGAATGCTGAACTAATGAGAACTGCCAGGGAATCTTCAAACTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CAA 90 bp | TGTCTTCTCTACCAGGAGCCTGAGGTGAAAGATGTCCCGTCTCCTCCATCCTCCAGCAAACAAGTTCCGTaGGAAAGTTTGAAGATTCCC | + |
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Preference number: 5 (lower is better) Translates to: CLLYQEPEVKDVPSPPSSSKQVP*ESLKIP Trigger: GGGAATCTTCAAACTTTCCAACGGAACTTGTTTGCT...GGAGGATGGAGGAGACGGGACATCTTTCACCTCAGGCTCCTGGTAGAGAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CAA 90 bp | CAAACAAGTTCCGTTGGAAAGTTTGAAGATTCCCTGGCAGTTCTCATTAGTTCATTGGAGCTGAAGGTCTaGAGGCGCAGGCTGGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: QTSSVGKFEDSLAVLISSLELKV*RRRLVS Trigger: GGACACCAGCCTGCGCCTCAAGACCTTCAGCTCCAA...TGAACTAATGAGAACTGCCAGGGAATCTTCAAACTTTCCAACGGAACTTGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CAA 90 bp | GGAAAGTTTGAAGATTCCCTGGCAGTTCTCATTAGTTCAGCATTCCCGAAGTGTAGGACTCTCTCCTGGTaGGCTTCTTGTGCTTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: GKFEDSLAVLISSAFPKCRTLSW*ASCACA Trigger: GGCACAAGCACAAGAAGCCAACCAGGAGAGAGTCCT...ACACTTCGGGAATGCTGAACTAATGAGAACTGCCAGGGAATCTTCAAACTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS-3UTR CAA 90 bp | CAAACAAGTTCCGTTGGAAAGTTTGAAGATTCCCTGGCAGTTCTCATTAGTTCACTCCTGGTTGGCTTCTaGTGCTTGTGCCATGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: QTSSVGKFEDSLAVLISSLLVGF*CLCHVP Trigger: TGGCACATGGCACAAGCACAAGAAGCCAACCAGGAG...TGAACTAATGAGAACTGCCAGGGAATCTTCAAACTTTCCAACGGAACTTGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CCA 72 bp | GCTGCAGCTGCTTCGCGGCGGCGAGACGGCCAGCGGTaGCCCGCGCTGCGCCCAGATGTTGGCGGCCGTGAA | + |
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Preference number: 6 (lower is better) Translates to: AAAASRRRDGQR*PALRPDVGGRE Trigger: TTCACGGCCGCCAACATCTGGGCGCAGCGCGGGCCACCGCTGGCCGTCTCGCCGCCGCGAAGCAGCTGCAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587578.1 |
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| CDS TCA 72 bp | GCGGTGGCCCGCGCTGCGCCCAGATGTTGGCGGCCGTaGAGTCCACAAAGGAGCCTTCGCGCGCGCGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: AVARAAPRCWRP*SPQRSLRARVP Trigger: AGGGACGCGCGCGCGAAGGCTCCTTTGTGGACTTCACGGCCGCCAACATCTGGGCGCAGCGCGGGCCACCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330871.3 ENST00000587578.1 |
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| CDS GCA 72 bp | CTTCGCGGCGGCGAGACGGCCAGCGGTGGCCCGCGCTaGGCCCAGATGTTGGCGGCCGTGAAGTCCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: LRGGETASGGPR*AQMLAAVKSTK Trigger: CTTTGTGGACTTCACGGCCGCCAACATCTGGGCGCAGCGCGGGCCACCGCTGGCCGTCTCGCCGCCGCGAAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587578.1 |
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| CDS CAA 90 bp | CGCAGGCTGGTGTCCAGGGGGCGGCTCATCCCGGCGGCGGGAAACTaGCTGTGGGTGACCATGGCGCACGGAGCCAGCGTGGATCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: RRLVSRGRLIPAAGN*LWVTMAHGASVDLR Trigger: GCGCAGATCCACGCTGGCTCCGTGCGCCATGGTCACCCACAGCAAGTTTCCCGCCGCCGGGATGAGCCGCCCCCTGGACACCAGCCTGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS TCA 72 bp | GGCGGCTCATCCCGGCGGCGGGAAACTTGCTGTGGGTaGCCATGGCGCACGGAGCCAGCGTGGATCTGCGCG | + |
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Preference number: 6 (lower is better) Translates to: GGSSRRRETCCG*PWRTEPAWICA Trigger: CGCGCAGATCCACGCTGGCTCCGTGCGCCATGGTCACCCACAGCAAGTTTCCCGCCGCCGGGATGAGCCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330871.3 ENST00000587578.1 |
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| CDS TCA 72 bp | GGGCTCCAGGGGGCGGCATGTAGTGGTGCACCAGCTTaGGCACGCAGTCGAAGCGGGGCACGGGCTGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: GLQGAACSGAPA*ARSRSGARAAC Trigger: GCACGCAGCCCGTGCCCCGCTTCGACTGCGTGCTCAAGCTGGTGCACCACTACATGCCGCCCCCTGGAGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CAA 72 bp | GTGTCCAGGGGGCGGCTCATCCCGGCGGCGGGAAACTaGCTGTGGGTGACCATGGCGCACGGAGCCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: VSRGRLIPAAGN*LWVTMAHGASV Trigger: CACGCTGGCTCCGTGCGCCATGGTCACCCACAGCAAGTTTCCCGCCGCCGGGATGAGCCGCCCCCTGGACAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CCA 72 bp | AGGGGGCGGCTCATCCCGGCGGCGGGAAACTTGCTGTaGGTGACCATGGCGCACGGAGCCAGCGTGGATCTG | + |
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Preference number: 6 (lower is better) Translates to: RGRLIPAAGNLL*VTMAHGASVDL Trigger: CAGATCCACGCTGGCTCCGTGCGCCATGGTCACCCACAGCAAGTTTCCCGCCGCCGGGATGAGCCGCCCCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330871.3 ENST00000587578.1 |
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| CDS GCA 72 bp | GGCACTGAGCAGCAGGTTCGCCTCGCCGCCGGTCACTaGGCTCCAGTAGAAGCCGCTCTCCTGCAGCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: GTEQQVRLAAGH*APVEAALLQLA Trigger: CGCAAGCTGCAGGAGAGCGGCTTCTACTGGAGCGCAGTGACCGGCGGCGAGGCGAACCTGCTGCTCAGTGCC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS GCA 72 bp | ACCAGCTTGAGCACGCAGTCGAAGCGGGGCACGGGCTaGGTGCTCCGGGGATCGCTCTGCAGAGAGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: TSLSTQSKRGTG*VLRGSLCREKL Trigger: CAGCTTCTCTCTGCAGAGCGATCCCCGGAGCACGCAGCCCGTGCCCCGCTTCGACTGCGTGCTCAAGCTGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS GCA 72 bp | GCTGCGTGCTCCGGGGATCGCTCTGCAGAGAGAAGCTaGCCCCCTCACACTGGATGCGCAGGTTCTTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: AACSGDRSAERS*PPHTGCAGSWS Trigger: GGACCAAGAACCTGCGCATCCAGTGTGAGGGGGGCAGCTTCTCTCTGCAGAGCGATCCCCGGAGCACGCAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CAA 90 bp | TCCTGCAGCTTGCGCACTGCGTTCACCACCAGCTGGTACTCGCTCTaGGAGCTGAAGGTCTTGAGGCGCAGGCTGGTGTCCAGGGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SCSLRTAFTTSWYSL*ELKVLRRRLVSRGR Trigger: CCGCCCCCTGGACACCAGCCTGCGCCTCAAGACCTTCAGCTCCAAGAGCGAGTACCAGCTGGTGGTGAACGCAGTGCGCAAGCTGCAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS TCA 72 bp | TCCAGGTGGCCGTTGACGGTCTTCCGACAGAGATGCTaGAGAGTGGCCACGTTGGAGGAGAGGGGCCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SRWPLTVFRQRC*RVATLEERGRL Trigger: GAGCCGGCCCCTCTCCTCCAACGTGGCCACTCTTCAGCATCTCTGTCGGAAGACCGTCAACGGCCACCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CCA 72 bp | GACTGGGTCTTGACGCTGAGCGTGAAGAAGTGGCGCTaGTCCGAGCTGTCGCGGATCAGAAAGGTGCCGGCG | + |
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Preference number: 6 (lower is better) Translates to: DWVLTLSVKKWR*SELSRIRKVPA Trigger: CGCCGGCACCTTTCTGATCCGCGACAGCTCGGACCAGCGCCACTTCTTCACGCTCAGCGTCAAGACCCAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CAA 72 bp | ACCACCAGCTGGTACTCGCTCTTGGAGCTGAAGGTCTaGAGGCGCAGGCTGGTGTCCAGGGGGCGGCTCATC | + |
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Preference number: 6 (lower is better) Translates to: TTSWYSLLELKV*RRRLVSRGRLI Trigger: GATGAGCCGCCCCCTGGACACCAGCCTGCGCCTCAAGACCTTCAGCTCCAAGAGCGAGTACCAGCTGGTGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CCA 72 bp | TCTTCTCGCCCCCGGAGTAGATGTAATAGGCTCTTCTaGGGGGACTCCCAGGGAGTGGCTGGGCAGACGGCT | + |
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Preference number: 6 (lower is better) Translates to: SSRPRSRCNRLF*GDSQGVAGQTA Trigger: AGCCGTCTGCCCAGCCACTCCCTGGGAGTCCCCCCAGAAGAGCCTATTACATCTACTCCGGGGGCGAGAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CCA 72 bp | CGGTCTTCCGACAGAGATGCTGAAGAGTGGCCACGTTaGAGGAGAGGGGCCGGCTCAACACCAGGGGGATCT | + |
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Preference number: 6 (lower is better) Translates to: RSSDRDAEEWPR*RRGAGSTPGGS Trigger: AGATCCCCCTGGTGTTGAGCCGGCCCCTCTCCTCCAACGTGGCCACTCTTCAGCATCTCTGTCGGAAGACCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS GCA 72 bp | TCACTGCGCTCCAGTAGAAGCCGCTCTCCTGCAGCTTaGGCACTGCGTTCACCACCAGCTGGTACTCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SLRSSRSRSPAA*ALRSPPAGTRS Trigger: AGAGCGAGTACCAGCTGGTGGTGAACGCAGTGCGCAAGCTGCAGGAGAGCGGCTTCTACTGGAGCGCAGTGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CCA 72 bp | CTCTCCTGCAGCTTGCGCACTGCGTTCACCACCAGCTaGTACTCGCTCTTGGAGCTGAAGGTCTTGAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: LSCSLRTAFTTS*YSLLELKVLRR Trigger: GCGCCTCAAGACCTTCAGCTCCAAGAGCGAGTACCAGCTGGTGGTGAACGCAGTGCGCAAGCTGCAGGAGAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CCA 72 bp | GTCCCAGACTGGGTCTTGACGCTGAGCGTGAAGAAGTaGCGCTGGTCCGAGCTGTCGCGGATCAGAAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VPDWVLTLSVKK*RWSELSRIRKV Trigger: CACCTTTCTGATCCGCGACAGCTCGGACCAGCGCCACTTCTTCACGCTCAGCGTCAAGACCCAGTCTGGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CCA 72 bp | CCCTCACACTGGATGCGCAGGTTCTTGGTCCCAGACTaGGTCTTGACGCTGAGCGTGAAGAAGTGGCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PSHWMRRFLVPD*VLTLSVKKWRW Trigger: CCAGCGCCACTTCTTCACGCTCAGCGTCAAGACCCAGTCTGGGACCAAGAACCTGCGCATCCAGTGTGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CAA 72 bp | TTGCGCACTGCGTTCACCACCAGCTGGTACTCGCTCTaGGAGCTGAAGGTCTTGAGGCGCAGGCTGGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRTAFTTSWYSL*ELKVLRRRLVS Trigger: GGACACCAGCCTGCGCCTCAAGACCTTCAGCTCCAAGAGCGAGTACCAGCTGGTGGTGAACGCAGTGCGCAA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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| CDS CAA 72 bp | CACTGGATGCGCAGGTTCTTGGTCCCAGACTGGGTCTaGACGCTGAGCGTGAAGAAGTGGCGCTGGTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: HWMRRFLVPDWV*TLSVKKWRWSE Trigger: CTCGGACCAGCGCCACTTCTTCACGCTCAGCGTCAAGACCCAGTCTGGGACCAAGAACCTGCGCATCCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330871.3 |
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