Pregenerated sensors for SNX31 (Homo sapiens)
Ensembl gene IDs: ENSG00000174226Ensembl transcript IDs: ENST00000311812.7, ENST00000428383.6, ENST00000518342.1, ENST00000519521.1, ENST00000520352.5, ENST00000520661.5, ENST00000520743.1
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTaGGGAAAGAGATCAGTATTTCATCACCTCCTTGCTCTAGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: AFHFEYIHIGRLRLM*GKRSVFHHLLALVL Trigger: CAGAACTAGAGCAAGGAGGTGATGAAATACTGATCTCTTTCCTCACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| 3UTR TCA 90 bp | TTCTTTTTCAGTGATTCCATTTCTCAGAGCCCTATTCTCCTCCGTTaGAGAGTCACATCTTTAGAAATCGATCCAAAATATCTTTATGAT | + |
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Preference number: 1 (lower is better) Translates to: FFFSDSISQSPILLR*RVTSLEIDPKYLYD Trigger: ATCATAAAGATATTTTGGATCGATTTCTAAAGATGTGACTCTTCAACGGAGGAGAATAGGGCTCTGAGAAATGGAATCACTGAAAAAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| 3UTR-3UTR TCA 90 bp | AAATGGGAAGAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCGTTCTTTCACTGTCTTaGGATAGCCTCCAAGGATAT | + |
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Preference number: 2 (lower is better) Translates to: KWEEVKFPPLMVGSPPESVLSLS*DSLQGY Trigger: ATATCCTTGGAGGCTATCTCAAGACAGTGAAAGAAC...GGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTCTTCCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000311812.7 ENST00000428383.6 ENST00000518342.1 |
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| 3UTR CAA 90 bp | GTCAAGCAGAGAACAGGGCAGCGTTTCACTTTGAGTACATCCATATaGGTAGGCTCAGACTTATGTGAGGAAAGAGATCAGTATTTCATC | + |
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Preference number: 2 (lower is better) Translates to: VKQRTGQRFTLSTSI*VGSDLCEERDQYFI Trigger: GATGAAATACTGATCTCTTTCCTCACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTGCCCTGTTCTCTGCTTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGGGCAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTGTTCTTTCACTGTCTTaGGATAGCCTCCAAGGATAT | + |
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Preference number: 2 (lower is better) Translates to: TGQRFTLSTSILVGSDLCVLSLS*DSLQGY Trigger: ATATCCTTGGAGGCTATCTCAAGACAGTGAAAGAAC...ACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTGCCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| 3UTR-3UTR CCA 90 bp | CAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTGAGGAATGCTCTAGTTCTGTGTaGATAGATCAGAGAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: QRFTLSTSILVGSDLCEECSSSV*IDQRTQ Trigger: CTGGGTTCTCTGATCTATCCACACAGAACTAGAGCA...TTCCTCACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| 3UTR-3UTR CAA 90 bp | TGGATAGATCAGAGAACCCAGGTTTCTTTTTCAGTGATTCCATTTCTCAGAGCCCTGTGGTATAATACCTaGATGAATACAGTCCATGTT | + |
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Preference number: 3 (lower is better) Translates to: WIDQRTQVSFSVIPFLRALWYNT*MNTVHV Trigger: AACATGGACTGTATTCATCAAGGTATTATACCACAG...GGCTCTGAGAAATGGAATCACTGAAAAAGAAACCTGGGTTCTCTGATCTATCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| 3UTR TCA 72 bp | TTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTaGGGAAAGAGATCAGTATTTCATCACCTCCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: FEYIHIGRLRLM*GKRSVFHHLLA Trigger: AGCAAGGAGGTGATGAAATACTGATCTCTTTCCTCACATAAGTCTGAGCCTACCAATATGGATGTACTCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| 3UTR TCA 72 bp | AGTGATTCCATTTCTCAGAGCCCTATTCTCCTCCGTTaGAGAGTCACATCTTTAGAAATCGATCCAAAATAT | + |
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Preference number: 3 (lower is better) Translates to: SDSISQSPILLR*RVTSLEIDPKY Trigger: ATATTTTGGATCGATTTCTAAAGATGTGACTCTTCAACGGAGGAGAATAGGGCTCTGAGAAATGGAATCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCAGCGCGTCGGACCGCTaGTGGGACACCGGGATACAG | + |
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Preference number: 4 (lower is better) Translates to: FPPLMVGSPPESPSSFTVSASDR*WDTGIQ Trigger: CTGTATCCCGGTGTCCCAGCAGCGGTCCGACGCGCT...GACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR TCA 90 bp | TCAGAGAACCCAGGTTTCTTTTTCAGTGATTCCATTTCTCAGAGCCCTATTCTCGGCGGTGCGCGGCTCTaGACTCGGCAGCGGTGGACG | + |
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Preference number: 4 (lower is better) Translates to: SENPGFFFSDSISQSPILGGARL*TRQRWT Trigger: CGTCCACCGCTGCCGAGTTCAGAGCCGCGCACCGCC...GAGAATAGGGCTCTGAGAAATGGAATCACTGAAAAAGAAACCTGGGTTCTCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR GCA 90 bp | TCAGAGAACCCAGGTTTCTTTTTCAGTGATTCCATTTCTCAGAGCCCTATTCTCGGACGCAGCGCGGCCTaGCACGCGACTCAGAGCGAA | + |
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Preference number: 4 (lower is better) Translates to: SENPGFFFSDSISQSPILGRSAA*HATQSE Trigger: TTCGCTCTGAGTCGCGTGGCAGGCCGCGCTGCGTCC...GAGAATAGGGCTCTGAGAAATGGAATCACTGAAAAAGAAACCTGGGTTCTCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR CCA 90 bp | GAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTACGATGTCCTGGGTCTaGCTGTCAGGCAGGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: EVKFPPLMVGSPPESPSSTMSWV*LSGRVM Trigger: CATCACCCTGCCTGACAGCCAGACCCAGGACATCGT...AGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR CCA 90 bp | TGGGAAGAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCATGGAAAACGATGTCCTaGGTCTGGCTGTCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: WEEVKFPPLMVGSPPESPWKTMS*VWLSGR Trigger: CCTGCCTGACAGCCAGACCCAGGACATCGTTTTCCA...TGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTCTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR TCA 90 bp | CCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCTTGCCTTGCCAAACCGAATaGGAAAGAGGCCGAAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: PPLMVGSPPESPSSFTVLPCQTE*ERGRSS Trigger: GCTACTTCGGCCTCTTTCTCATTCGGTTTGGCAAGG...CAAGACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR TCA 90 bp | GAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTGAGTTCCAAGGAAAGTaGCCTGCCAGCACTTCACCC | + |
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Preference number: 4 (lower is better) Translates to: EVKFPPLMVGSPPESPSSEFQGK*PASTSP Trigger: GGGTGAAGTGCTGGCAGGTCACTTTCCTTGGAACTC...AGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCCCAAGGAAAGTGACCTaGCAGCACTTCACCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: FPPLMVGSPPESPSSFTVPRKVT*QHFTLL Trigger: GAGCAGGGTGAAGTGCTGGCAGGTCACTTTCCTTGG...GACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR CCA 90 bp | TGGGAAGAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCACACGGAGTCGAGGGATaGAGCCATATACCACTTTCG | + |
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Preference number: 4 (lower is better) Translates to: WEEVKFPPLMVGSPPESPHGVEG*SHIPLS Trigger: CGAAAGTGGTATATGGCTCCATCCCTCGACTCCGTG...TGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTCTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR CCA 90 bp | GAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTGGTTGAGAGTTCTCTaGGGCCCATCCGTATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: EVKFPPLMVGSPPESPSSWLRVL*GPSVSS Trigger: GCTGGATACGGATGGGCCCCAGAGAACTCTCAACCA...AGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR TCA 90 bp | CCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCTTGAGAGCTCTAAGTTCTGGTTaGGAGTTCTCTGGGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: PLMVGSPPESPSSFTVLRALSSG*EFSGAH Trigger: ATGGGCCCCAGAGAACTCTCAACCAGAACTTAGAGC...TCTCAAGACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR GCA 90 bp | AAATGGGAAGAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCAATCTACCGCCACCCTaGAGTCCATCAGCACGGAGT | + |
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Preference number: 4 (lower is better) Translates to: KWEEVKFPPLMVGSPPESNLPPP*SPSARS Trigger: ACTCCGTGCTGATGGACTGCAGGGTGGCGGTAGATT...GGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTCTTCCCATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR GCA 90 bp | GTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCCCAAGGAAAGTGACCTaGCAGCACTTCACCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: VKFPPLMVGSPPESPSSFPRKVT*QHFTLL Trigger: GAGCAGGGTGAAGTGCTGGCAGGTCACTTTCCTTGG...GAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR CCA 90 bp | CCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCTTGAGAGCCTCTGTGCCTGTGTaGGTTTGGCCCATCCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: PLMVGSPPESPSSFTVLRASVPV*VWPILF Trigger: AAAAAGGATGGGCCAAACCCACACAGGCACAGAGGC...TCTCAAGACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR CCA 90 bp | GTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCGCCTCTGTGCCTGTGTaGGTTTGGCCCATCCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: VKFPPLMVGSPPESPSSFASVPV*VWPILF Trigger: AAAAAGGATGGGCCAAACCCACACAGGCACAGAGGC...GAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR CCA 90 bp | TTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCTTCACCCTGCTCATCTaGAAAACGATGTCCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: FPPLMVGSPPESPSSFTVFTLLI*KTMSWV Trigger: GACCCAGGACATCGTTTTCCAGATGAGCAGGGTGAA...GACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR CCA 90 bp | GAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTAGAAATGCATCTTCATaGCTGAGCGGTGTCTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: EVKFPPLMVGSPPESPSSRNASS*LSGVLG Trigger: TCCCAAGACACCGCTCAGCCATGAAGATGCATTTCT...AGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR CCA 90 bp | CCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCTTGAGAGTGCCTGTGTGGGTTTaGCCCATCCTTTTTCAATGT | + |
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Preference number: 4 (lower is better) Translates to: PLMVGSPPESPSSFTVLRVPVWV*PILFQC Trigger: ACATTGAAAAAGGATGGGCCAAACCCACACAGGCAC...TCTCAAGACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR CCA 90 bp | TGGATAGATCAGAGAACCCAGGTTTCTTTTTCAGTGATTCCATTTCTCAGAGCCACGATGTCCTGGGTCTaGCTGTCAGGCAGGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: WIDQRTQVSFSVIPFLRATMSWV*LSGRVM Trigger: CATCACCCTGCCTGACAGCCAGACCCAGGACATCGT...GGCTCTGAGAAATGGAATCACTGAAAAAGAAACCTGGGTTCTCTGATCTATCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR CCA 90 bp | GTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCCTGAGCTCTAAGTTCTaGTTGAGAGTTCTCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VKFPPLMVGSPPESPSSFLSSKF*LRVLWG Trigger: GCCCCAGAGAACTCTCAACCAGAACTTAGAGCTCAG...GAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR TCA 90 bp | TCAGAGAACCCAGGTTTCTTTTTCAGTGATTCCATTTCTCAGAGCCCTATTCTCGAGTTCCAAGGAAAGTaGCCTGCCAGCACTTCACCC | + |
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Preference number: 4 (lower is better) Translates to: SENPGFFFSDSISQSPILEFQGK*PASTSP Trigger: GGGTGAAGTGCTGGCAGGTCACTTTCCTTGGAACTC...GAGAATAGGGCTCTGAGAAATGGAATCACTGAAAAAGAAACCTGGGTTCTCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR TCA 90 bp | TGGGAAGAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAGTTCTTTCACTGTCTTaGGATAGCCTCCAAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: WEEVKFPPLMVGSPPESPVLSLS*DSLQGY Trigger: ATATCCTTGGAGGCTATCTCAAGACAGTGAAAGAAC...TGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTCTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311812.7 ENST00000428383.6 ENST00000518342.1 |
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| CDS-3UTR TCA 90 bp | CCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCTTGGTTCTTTCACTGTCTTaGGATAGCCTCCAAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: PPLMVGSPPESPSSFTVLVLSLS*DSLQGY Trigger: ATATCCTTGGAGGCTATCTCAAGACAGTGAAAGAAC...CAAGACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311812.7 ENST00000428383.6 ENST00000518342.1 |
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| CDS-3UTR GCA 90 bp | CAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTGAGGAAAATCTACCGCCACCCTaGAGTCCATCAGCACGGAGT | + |
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Preference number: 4 (lower is better) Translates to: QRFTLSTSILVGSDLCEENLPPP*SPSARS Trigger: ACTCCGTGCTGATGGACTGCAGGGTGGCGGTAGATT...TTCCTCACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR GCA 90 bp | GAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTAAAGCTTCTAATTTCTaGCTCTGTGCCTGTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: EVKFPPLMVGSPPESPSSKASNF*LCACVG Trigger: ACCCACACAGGCACAGAGGCAGAAATTAGAAGCTTT...AGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR CCA 90 bp | AGTTCTGTGTGGATAGATCAGAGAACCCAGGTTTCTTTTTCAGTGATTCCATTTGCGTCGGACCGCTGCTaGGACACCGGGATACAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SSVWIDQRTQVSFSVIPFASDRC*DTGIQK Trigger: TTTCTGTATCCCGGTGTCCCAGCAGCGGTCCGACGC...AAATGGAATCACTGAAAAAGAAACCTGGGTTCTCTGATCTATCCACACAGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR CCA 90 bp | TTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCAAATATTGTTCCAGTTaGTCCCTCCTCTCATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: FPPLMVGSPPESPSSFTVKYCSS*SLLSSA Trigger: GGCTGATGAGAGGAGGGACCAACTGGAACAATATTT...GACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR CCA 90 bp | GAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTGCTCTAGTTCTGTGTaGATAGATCAGAGAACCCAG | + |
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Preference number: 4 (lower is better) Translates to: EVKFPPLMVGSPPESPSSCSSSV*IDQRTQ Trigger: CTGGGTTCTCTGATCTATCCACACAGAACTAGAGCA...AGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR TCA 90 bp | CAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTGAGGAAGCTCTAAGTTCTGGTTaGGAGTTCTCTGGGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: QRFTLSTSILVGSDLCEEALSSG*EFSGAH Trigger: ATGGGCCCCAGAGAACTCTCAACCAGAACTTAGAGC...TTCCTCACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR CCA 90 bp | TGGGAAGAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCACCAGATAAGCTTTCTTaGTGGCGATGTCAAATGTAT | + |
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Preference number: 4 (lower is better) Translates to: WEEVKFPPLMVGSPPESPPDKLS*WRCQMY Trigger: ATACATTTGACATCGCCACCAAGAAAGCTTATCTGG...TGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTCTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR CCA 90 bp | CAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTGAGGAACACGGAGTCGAGGGATaGAGCCATATACCACTTTCG | + |
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Preference number: 4 (lower is better) Translates to: QRFTLSTSILVGSDLCEEHGVEG*SHIPLS Trigger: CGAAAGTGGTATATGGCTCCATCCCTCGACTCCGTG...TTCCTCACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCTTCAATGTCCTGTATTaGCTGCATGTAGAGCAAATC | + |
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Preference number: 4 (lower is better) Translates to: FPPLMVGSPPESPSSFTVFNVLY*LHVEQI Trigger: GATTTGCTCTACATGCAGGCAATACAGGACATTGAA...GACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS-3UTR CCA 90 bp | ACAGGGCAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTGTGCCTGTGTGGGTTTaGCCCATCCTTTTTCAATGT | + |
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Preference number: 4 (lower is better) Translates to: TGQRFTLSTSILVGSDLCVPVWV*PILFQC Trigger: ACATTGAAAAAGGATGGGCCAAACCCACACAGGCAC...ACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTGCCCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR CCA 90 bp | AGTTCTGTGTGGATAGATCAGAGAACCCAGGTTTCTTTTTCAGTGATTCCATTTTGGAAAACGATGTCCTaGGTCTGGCTGTCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSVWIDQRTQVSFSVIPFWKTMS*VWLSGR Trigger: CCTGCCTGACAGCCAGACCCAGGACATCGTTTTCCA...AAATGGAATCACTGAAAAAGAAACCTGGGTTCTCTGATCTATCCACACAGAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR CCA 90 bp | CAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTGAGGAATTCACCCTGCTCATCTaGAAAACGATGTCCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: QRFTLSTSILVGSDLCEEFTLLI*KTMSWV Trigger: GACCCAGGACATCGTTTTCCAGATGAGCAGGGTGAA...TTCCTCACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR TCA 90 bp | GTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCAGGCTCAGACTTATGTaGGGAAAGAGATCAGTATTT | + |
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Preference number: 4 (lower is better) Translates to: VKFPPLMVGSPPESPSSFRLRLM*GKRSVF Trigger: AAATACTGATCTCTTTCCTCACATAAGTCTGAGCCT...GAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311812.7 |
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| CDS-3UTR GCA 90 bp | ACAGGGCAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTCATAGCTGTGGTCATTaGCAGATAGTACTTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGQRFTLSTSILVGSDLCHSCGH*QIVLWW Trigger: CCACCAAAGTACTATCTGGCAATGACCACAGCTATG...ACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTGCCCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR CCA 90 bp | CATAGAGTGCTGTGGTATAATACCTTGATGAATACAGTCCATGTTAATGCCAAATGGTTGAGAGTTCTCTaGGGCCCATCCGTATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HRVLWYNTLMNTVHVNAKWLRVL*GPSVSS Trigger: GCTGGATACGGATGGGCCCCAGAGAACTCTCAACCA...TTTGGCATTAACATGGACTGTATTCATCAAGGTATTATACCACAGCACTCTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CCA 90 bp | CCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCTTGTTCCATAGAGTGCTGTaGTATAATACCTTGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PPLMVGSPPESPSSFTVLFHRVL*YNTLMN Trigger: ATTCATCAAGGTATTATACCACAGCACTCTATGGAA...CAAGACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311812.7 ENST00000428383.6 ENST00000518342.1 |
||
| 3UTR CAA 72 bp | AGAACAGGGCAGCGTTTCACTTTGAGTACATCCATATaGGTAGGCTCAGACTTATGTGAGGAAAGAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTGQRFTLSTSI*VGSDLCEERDQ Trigger: CTGATCTCTTTCCTCACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTGCCCTGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| 3UTR CAA 72 bp | ACAATGGTCAAGCAGAGAACAGGGCAGCGTTTCACTTaGAGTACATCCATATTGGTAGGCTCAGACTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: TMVKQRTGQRFT*STSILVGSDLC Trigger: ACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTGCCCTGTTCTCTGCTTGACCATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR TCA 90 bp | CCCAAGTTCTTTCACTGTCTTGAGATAGCCTCCAAGGATATTTTAAAATATGAGCCTTGCCAAACCGAATaGGAAAGAGGCCGAAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKFFHCLEIASKDILKYEPCQTE*ERGRSS Trigger: GCTACTTCGGCCTCTTTCTCATTCGGTTTGGCAAGG...CTCATATTTTAAAATATCCTTGGAGGCTATCTCAAGACAGTGAAAGAACTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGTGTGGATAGATCAGAGAACCCAGGTTTCTTTTTCAGTGATTCCATTTACCGGGATACAGAAATaGATCTTCATGGCTGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSVWIDQRTQVSFSVIPFTGIQK*IFMAER Trigger: CCGCTCAGCCATGAAGATGCATTTCTGTATCCCGGT...AAATGGAATCACTGAAAAAGAAACCTGGGTTCTCTGATCTATCCACACAGAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR GCA 90 bp | CATAGAGTGCTGTGGTATAATACCTTGATGAATACAGTCCATGTTAATGCCAAAGCCAGCACTTCACCCTaGTCATCTGGAAAACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: HRVLWYNTLMNTVHVNAKASTSP*SSGKRC Trigger: ACATCGTTTTCCAGATGAGCAGGGTGAAGTGCTGGC...TTTGGCATTAACATGGACTGTATTCATCAAGGTATTATACCACAGCACTCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR GCA 90 bp | CCCAAGTTCTTTCACTGTCTTGAGATAGCCTCCAAGGATATTTTAAAATATGAGGCCAGCACTTCACCCTaGTCATCTGGAAAACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PKFFHCLEIASKDILKYEASTSP*SSGKRC Trigger: ACATCGTTTTCCAGATGAGCAGGGTGAAGTGCTGGC...CTCATATTTTAAAATATCCTTGGAGGCTATCTCAAGACAGTGAAAGAACTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CCA 90 bp | CATAGAGTGCTGTGGTATAATACCTTGATGAATACAGTCCATGTTAATGCCAAACTGAGCTCTAAGTTCTaGTTGAGAGTTCTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRVLWYNTLMNTVHVNAKLSSKF*LRVLWG Trigger: GCCCCAGAGAACTCTCAACCAGAACTTAGAGCTCAG...TTTGGCATTAACATGGACTGTATTCATCAAGGTATTATACCACAGCACTCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CCA 90 bp | GTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCTTCCATAGAGTGCTGTaGTATAATACCTTGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VKFPPLMVGSPPESPSSFFHRVL*YNTLMN Trigger: ATTCATCAAGGTATTATACCACAGCACTCTATGGAA...GAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311812.7 ENST00000428383.6 ENST00000518342.1 |
||
| CDS-3UTR TCA 90 bp | CAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTGAGGAACTATCCTCACTGTATTaGAATCTGAGCTCTAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRFTLSTSILVGSDLCEELSSLY*NLSSKF Trigger: GAACTTAGAGCTCAGATTTCAATACAGTGAGGATAG...TTCCTCACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR CCA 90 bp | TCAGAGAACCCAGGTTTCTTTTTCAGTGATTCCATTTCTCAGAGCCCTATTCTCACTTCTCAACACGTTTaGGTCCATGGTTACATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SENPGFFFSDSISQSPILTSQHV*VHGYIL Trigger: CAAAATGTAACCATGGACCCAAACGTGTTGAGAAGT...GAGAATAGGGCTCTGAGAAATGGAATCACTGAAAAAGAAACCTGGGTTCTCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGTGTGGATAGATCAGAGAACCCAGGTTTCTTTTTCAGTGATTCCATTTCCTATTCTCCTCCGTTaGAGAGTCACATCTTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSVWIDQRTQVSFSVIPFPILLR*RVTSLE Trigger: TTCTAAAGATGTGACTCTTCAACGGAGGAGAATAGG...AAATGGAATCACTGAAAAAGAAACCTGGGTTCTCTGATCTATCCACACAGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR TCA 90 bp | CAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTGAGGAATTCCAAATAGCATGTTaGTTATTGAACTGCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRFTLSTSILVGSDLCEEFQIAC*LLNCLQ Trigger: CTGAAGGCAGTTCAATAATCAACATGCTATTTGGAA...TTCCTCACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTTCAAATGTATTCAGCTaGGCCAGTTTTAAAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGQRFTLSTSILVGSDLCSNVFS*ASFKNS Trigger: TGAGTTTTTAAAACTGGCGCAGCTGAATACATTTGA...ACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTGCCCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR GCA 90 bp | CCCAAGTTCTTTCACTGTCTTGAGATAGCCTCCAAGGATATTTTAAAATATGAGAAAGCTTCTAATTTCTaGCTCTGTGCCTGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKFFHCLEIASKDILKYEKASNF*LCACVG Trigger: ACCCACACAGGCACAGAGGCAGAAATTAGAAGCTTT...CTCATATTTTAAAATATCCTTGGAGGCTATCTCAAGACAGTGAAAGAACTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR TCA 90 bp | CATAGAGTGCTGTGGTATAATACCTTGATGAATACAGTCCATGTTAATGCCAAAGTTCTTTCACTGTCTTaGGATAGCCTCCAAGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: HRVLWYNTLMNTVHVNAKVLSLS*DSLQGY Trigger: ATATCCTTGGAGGCTATCTCAAGACAGTGAAAGAAC...TTTGGCATTAACATGGACTGTATTCATCAAGGTATTATACCACAGCACTCTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000311812.7 ENST00000428383.6 ENST00000518342.1 |
||
| CDS-3UTR CCA 90 bp | CAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTGAGGAAACACGTTTGGGTCCATaGTTACATTTTGCAAATATT | + |
|
Preference number: 4 (lower is better) Translates to: QRFTLSTSILVGSDLCEETRLGP*LHFANI Trigger: AATATTTGCAAAATGTAACCATGGACCCAAACGTGT...TTCCTCACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR TCA 90 bp | CATAGAGTGCTGTGGTATAATACCTTGATGAATACAGTCCATGTTAATGCCAAACTATCCTCACTGTATTaGAATCTGAGCTCTAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRVLWYNTLMNTVHVNAKLSSLY*NLSSKF Trigger: GAACTTAGAGCTCAGATTTCAATACAGTGAGGATAG...TTTGGCATTAACATGGACTGTATTCATCAAGGTATTATACCACAGCACTCTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR GCA 90 bp | CATAGAGTGCTGTGGTATAATACCTTGATGAATACAGTCCATGTTAATGCCAAATCCGGAACTTCAATCTaGATTTCTGTATTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HRVLWYNTLMNTVHVNAKSGTSI*ISVFSA Trigger: TGCTGAGAATACAGAAATGCAGATTGAAGTTCCGGA...TTTGGCATTAACATGGACTGTATTCATCAAGGTATTATACCACAGCACTCTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR GCA 90 bp | CCCAAGTTCTTTCACTGTCTTGAGATAGCCTCCAAGGATATTTTAAAATATGAGTCCGGAACTTCAATCTaGATTTCTGTATTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKFFHCLEIASKDILKYESGTSI*ISVFSA Trigger: TGCTGAGAATACAGAAATGCAGATTGAAGTTCCGGA...CTCATATTTTAAAATATCCTTGGAGGCTATCTCAAGACAGTGAAAGAACTTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CCA 90 bp | CCCAAGTTCTTTCACTGTCTTGAGATAGCCTCCAAGGATATTTTAAAATATGAGCCAGATAAGCTTTCTTaGTGGCGATGTCAAATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PKFFHCLEIASKDILKYEPDKLS*WRCQMY Trigger: ATACATTTGACATCGCCACCAAGAAAGCTTATCTGG...CTCATATTTTAAAATATCCTTGGAGGCTATCTCAAGACAGTGAAAGAACTTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CCA 90 bp | CATAGAGTGCTGTGGTATAATACCTTGATGAATACAGTCCATGTTAATGCCAAATTCCATAGAGTGCTGTaGTATAATACCTTGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HRVLWYNTLMNTVHVNAKFHRVL*YNTLMN Trigger: ATTCATCAAGGTATTATACCACAGCACTCTATGGAA...TTTGGCATTAACATGGACTGTATTCATCAAGGTATTATACCACAGCACTCTATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000311812.7 ENST00000428383.6 ENST00000518342.1 |
||
| CDS GCA 90 bp | GCGGTGCGCGGCTCTGAACTCGGCAGCGGTGGACGCAGCGCGGCCTaGCACGCGACTCAGAGCGAACCCCGGCGCCCGCTCTCGCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVRGSELGSGGRSAA*HATQSEPRRPLSPA Trigger: GGCCGGCGAGAGCGGGCGCCGGGGTTCGCTCTGAGTCGCGTGGCAGGCCGCGCTGCGTCCACCGCTGCCGAGTTCAGAGCCGCGCACCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS TCA 90 bp | GTAGCGCTGGGAACCCGACCTGCGGCGGCGGGCGGTGCGCGGCTCTaGACTCGGCAGCGGTGGACGCAGCGCGGCCTGCCACGCGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: VALGTRPAAAGGARL*TRQRWTQRGLPRDS Trigger: TGAGTCGCGTGGCAGGCCGCGCTGCGTCCACCGCTGCCGAGTTCAGAGCCGCGCACCGCCCGCCGCCGCAGGTCGGGTTCCCAGCGCTAC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS GCA 90 bp | TGTCTTGGGAGTAGCGCTGGGAACCCGACCTGCGGCGGCGGGCGGTaGGCGGCTCTGAACTCGGCAGCGGTGGACGCAGCGCGGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: CLGSSAGNPTCGGGR*AALNSAAVDAARPA Trigger: GGCAGGCCGCGCTGCGTCCACCGCTGCCGAGTTCAGAGCCGCGCACCGCCCGCCGCCGCAGGTCGGGTTCCCAGCGCTACTCCCAAGACA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS GCA 90 bp | TTCATGGCTGAGCGGTGTCTTGGGAGTAGCGCTGGGAACCCGACCTaGGGCGGCGGGCGGTGCGCGGCTCTGAACTCGGCAGCGGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FMAERCLGSSAGNPT*GGGRCAALNSAAVD Trigger: GTCCACCGCTGCCGAGTTCAGAGCCGCGCACCGCCCGCCGCCGCAGGTCGGGTTCCCAGCGCTACTCCCAAGACACCGCTCAGCCATGAA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS CCA 90 bp | CGTCGGACCGCTGCTGGGACACCGGGATACAGAAATGCATCTTCATaGCTGAGCGGTGTCTTGGGAGTAGCGCTGGGAACCCGACCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RRTAAGTPGYRNASS*LSGVLGVALGTRPA Trigger: CGCAGGTCGGGTTCCCAGCGCTACTCCCAAGACACCGCTCAGCCATGAAGATGCATTTCTGTATCCCGGTGTCCCAGCAGCGGTCCGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS GCA 90 bp | GCCTTAGCTGTTCGTTCCAACCGTGCAGCTGGCTGTAGCGCACCCTaGAGAAGAGGAACCCGTCCAGGTGCACGGAGTACAGCACGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALAVRSNRAAGCSAP*RRGTRPGARSTARS Trigger: GCTACGTGCTGTACTCCGTGCACCTGGACGGGTTCCTCTTCTGCAGGGTGCGCTACAGCCAGCTGCACGGTTGGAACGAACAGCTAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS GCA 90 bp | GCCTTAGCTGTTCGTTCCAACCGTGCAGCTGGCTGTAGCGCACCCTaGAGAAGAGGAACCCGTCCAGGTGCACGGAGTACAGCTGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ALAVRSNRAAGCSAP*RRGTRPGARSTAGE Trigger: TTCACCAGCTGTACTCCGTGCACCTGGACGGGTTCCTCTTCTGCAGGGTGCGCTACAGCCAGCTGCACGGTTGGAACGAACAGCTAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520743.1 |
||
| CDS GCA 90 bp | GCAGGCAATTTCCAAAGACCCGCCTTAGCTTTCGCGCAGCGCGTTTaGTACTTGAACGACGGGACCATCAGAAGCCCAGACCTCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: AGNFQRPALAFAQRV*YLNDGTIRSPDLST Trigger: GGTGCTGAGGTCTGGGCTTCTGATGGTCCCGTCGTTCAAGTAGCAAACGCGCTGCGCGAAAGCTAAGGCGGGTCTTTGGAAATTGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520352.5 |
||
| CDS CCA 90 bp | GTGACCTGCCAGCACTTCACCCTGCTCATCTGGAAAACGATGTCCTaGGTCTGGCTGTCAGGCAGGGTGATGCAGCAGCTGATCTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: VTCQHFTLLIWKTMS*VWLSGRVMQQLISL Trigger: TAATGAGATCAGCTGCTGCATCACCCTGCCTGACAGCCAGACCCAGGACATCGTTTTCCAGATGAGCAGGGTGAAGTGCTGGCAGGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS CCA 90 bp | AGAGTTCCAAGGAAAGTGACCTGCCAGCACTTCACCCTGCTCATCTaGAAAACGATGTCCTGGGTCTGGCTGTCAGGCAGGGTGATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RVPRKVTCQHFTLLI*KTMSWVWLSGRVMQ Trigger: CTGCATCACCCTGCCTGACAGCCAGACCCAGGACATCGTTTTCCAGATGAGCAGGGTGAAGTGCTGGCAGGTCACTTTCCTTGGAACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS CCA 90 bp | TGCCAGCACTTCACCCTGCTCATCTGGAAAACGATGTCCTGGGTCTaGCTGTCAGGCAGGGTGATGCAGCAGCTGATCTCATTATTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CQHFTLLIWKTMSWV*LSGRVMQQLISLLP Trigger: TGGCAATAATGAGATCAGCTGCTGCATCACCCTGCCTGACAGCCAGACCCAGGACATCGTTTTCCAGATGAGCAGGGTGAAGTGCTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CAA 90 bp | GTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCTGGCTGAGCGGTGTCTaGGGAGTAGCGCTGGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: VKFPPLMVGSPPESPSSFWLSGV*GVALGT Trigger: GGTTCCCAGCGCTACTCCCAAGACACCGCTCAGCCA...GAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS GCA 90 bp | CAATGTCCTGTATTGCCTGCATGTAGAGCAAATCTACCGCCACCCTaGAGTCCATCAGCACGGAGTCGAGGGATGGAGCCATATACCACT | + |
|
Preference number: 5 (lower is better) Translates to: QCPVLPACRANLPPP*SPSARSRGMEPYTT Trigger: AGTGGTATATGGCTCCATCCCTCGACTCCGTGCTGATGGACTGCAGGGTGGCGGTAGATTTGCTCTACATGCAGGCAATACAGGACATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CAA 90 bp | TTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCTTGCCAGATAGTACTTaGGTGGGAAGGGTGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FPPLMVGSPPESPSSFTVLPDST*VGRVAG Trigger: GCCTGCCACCCTTCCCACCAAAGTACTATCTGGCAA...GACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS GCA 90 bp | TTGTTCCAGTTGGTCCCTCCTCTCATCAGCCATAGCTGTGGTCATTaGCAGATAGTACTTTGGTGGGAAGGGTGGCAGGCAATTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LFQLVPPLISHSCGH*QIVLWWEGWQAISK Trigger: TTTGGAAATTGCCTGCCACCCTTCCCACCAAAGTACTATCTGGCAATGACCACAGCTATGGCTGATGAGAGGAGGGACCAACTGGAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000311812.7 ENST00000520352.5 ENST00000520661.5 |
||
| CDS-3UTR CAA 90 bp | CCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCTTGAGACGACACAGTCCAATTTaGTGTGACACCACCTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLMVGSPPESPSSFTVLRRHSPI*CDTTSR Trigger: CCTAGAGGTGGTGTCACACAAAATTGGACTGTGTCG...TCTCAAGACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CAA 90 bp | AAATGGGAAGAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCGAGAGCTTGCCCTCCTaGCCAAACCGAATGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KWEEVKFPPLMVGSPPESESLPS*PNRMRK Trigger: CTTTCTCATTCGGTTTGGCAAGGAGGGCAAGCTCTC...GGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTCTTCCCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CAA 90 bp | AAATGGGAAGAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCTTCACAACAGAGAGCTaGCCCTCCTTGCCAAACCGA | + |
|
Preference number: 5 (lower is better) Translates to: KWEEVKFPPLMVGSPPESFTTES*PSLPNR Trigger: TCGGTTTGGCAAGGAGGGCAAGCTCTCTGTTGTGAA...GGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTCTTCCCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CAA 90 bp | TTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCTGTGCCTGTGTGGGTTaGGCCCATCCTTTTTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: FPPLMVGSPPESPSSFTVCACVG*AHPFSM Trigger: CATTGAAAAAGGATGGGCCAAACCCACACAGGCACA...GACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CAA 90 bp | AAATGGGAAGAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCAGCTCTAAGTTCTGGTaGAGAGTTCTCTGGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KWEEVKFPPLMVGSPPESSSKFW*RVLWGP Trigger: TGGGCCCCAGAGAACTCTCAACCAGAACTTAGAGCT...GGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTCTTCCCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CAA 90 bp | AAATGGGAAGAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCAAATATTGTTCCAGTaGGTCCCTCCTCTCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KWEEVKFPPLMVGSPPESQILFQ*VPPLIS Trigger: GCTGATGAGAGGAGGGACCAACTGGAACAATATTTG...GGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTCTTCCCATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR CAA 90 bp | TGGGAAGAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCACAGCTGATCTCATTATaGCCAACAGAAAGAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WEEVKFPPLMVGSPPESPQLISL*PTERTA Trigger: AGCTGTTCTTTCTGTTGGCAATAATGAGATCAGCTG...TGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTCTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS CCA 90 bp | CTTTCTGGAAAGCTTCTAATTTCTGCCTCTGTGCCTGTGTGGGTTTaGCCCATCCTTTTTCAATGTCCTGTATTGCCTGCATGTAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSGKLLISASVPVWV*PILFQCPVLPACRA Trigger: TGCTCTACATGCAGGCAATACAGGACATTGAAAAAGGATGGGCCAAACCCACACAGGCACAGAGGCAGAAATTAGAAGCTTTCCAGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CAA 90 bp | TGGGAAGAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCATACATTTTGCAAATATaGTTCCAGTTGGTCCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WEEVKFPPLMVGSPPESPYILQI*FQLVPP Trigger: AGGAGGGACCAACTGGAACAATATTTGCAAAATGTA...TGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTCTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR CAA 90 bp | TGGGAAGAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCACTAATACTCTGTTCATaGGGCAGAAATATGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WEEVKFPPLMVGSPPESPLILCS*GRNMSR Trigger: TCTGGACATATTTCTGCCCAATGAACAGAGTATTAG...TGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTCTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CAA 90 bp | TGGATAGATCAGAGAACCCAGGTTTCTTTTTCAGTGATTCCATTTCTCAGAGCCGAGAGCTTGCCCTCCTaGCCAAACCGAATGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: WIDQRTQVSFSVIPFLRAESLPS*PNRMRK Trigger: CTTTCTCATTCGGTTTGGCAAGGAGGGCAAGCTCTC...GGCTCTGAGAAATGGAATCACTGAAAAAGAAACCTGGGTTCTCTGATCTATCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR CAA 90 bp | CAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTGAGGAATTCACAACAGAGAGCTaGCCCTCCTTGCCAAACCGA | + |
|
Preference number: 5 (lower is better) Translates to: QRFTLSTSILVGSDLCEEFTTES*PSLPNR Trigger: TCGGTTTGGCAAGGAGGGCAAGCTCTCTGTTGTGAA...TTCCTCACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR CAA 90 bp | GAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTCAGCTGATCTCATTATaGCCAACAGAAAGAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EVKFPPLMVGSPPESPSSQLISL*PTERTA Trigger: AGCTGTTCTTTCTGTTGGCAATAATGAGATCAGCTG...AGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CAA 90 bp | TGGGAAGAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCATTGAGTACATCCATATaGGTAGGCTCAGACTTATGT | + |
|
Preference number: 5 (lower is better) Translates to: WEEVKFPPLMVGSPPESPLSTSI*VGSDLC Trigger: ACATAAGTCTGAGCCTACCAATATGGATGTACTCAA...TGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTCTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS CCA 90 bp | TGTCTTCTTTCTGGAAAGCTTCTAATTTCTGCCTCTGTGCCTGTGTaGGTTTGGCCCATCCTTTTTCAATGTCCTGTATTGCCTGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: CLLSGKLLISASVPV*VWPILFQCPVLPAC Trigger: ACATGCAGGCAATACAGGACATTGAAAAAGGATGGGCCAAACCCACACAGGCACAGAGGCAGAAATTAGAAGCTTTCCAGAAAGAAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CAA 90 bp | CCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCTTGAGACTAATACTCTGTTCATaGGGCAGAAATATGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLMVGSPPESPSSFTVLRLILCS*GRNMSR Trigger: TCTGGACATATTTCTGCCCAATGAACAGAGTATTAG...TCTCAAGACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CAA 90 bp | GAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTTCAATGTCCTGTATaGCCTGCATGTAGAGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: EVKFPPLMVGSPPESPSSFQCPV*PACRAN Trigger: ATTTGCTCTACATGCAGGCAATACAGGACATTGAAA...AGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CAA 90 bp | CAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTGAGGAATGTGCCTGTGTGGGTTaGGCCCATCCTTTTTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: QRFTLSTSILVGSDLCEECACVG*AHPFSM Trigger: CATTGAAAAAGGATGGGCCAAACCCACACAGGCACA...TTCCTCACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR CAA 90 bp | CCTCCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCTTGCTGTGGTATAATACCTaGATGAATACAGTCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: PPLMVGSPPESPSSFTVLLWYNT*MNTVHV Trigger: AACATGGACTGTATTCATCAAGGTATTATACCACAG...CAAGACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311812.7 ENST00000428383.6 ENST00000518342.1 |
||
| CDS-3UTR CAA 90 bp | AAATGGGAAGAGGTCAAATTTCCTCCACTGATGGTAGGTAGCCCACCTGAATCCTTTCAATGTCCTGTATaGCCTGCATGTAGAGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: KWEEVKFPPLMVGSPPESFQCPV*PACRAN Trigger: ATTTGCTCTACATGCAGGCAATACAGGACATTGAAA...GGATTCAGGTGGGCTACCTACCATCAGTGGAGGAAATTTGACCTCTTCCCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CAA 90 bp | CCACTGATGGTAGGTAGCCCACCTGAATCCCCAAGTTCTTTCACTGTCTTGAGACTGTGGTATAATACCTaGATGAATACAGTCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: PLMVGSPPESPSSFTVLRLWYNT*MNTVHV Trigger: AACATGGACTGTATTCATCAAGGTATTATACCACAG...TCTCAAGACAGTGAAAGAACTTGGGGATTCAGGTGGGCTACCTACCATCAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311812.7 ENST00000428383.6 ENST00000518342.1 |
||
| CDS-3UTR CAA 90 bp | CCTTGCTCTAGTTCTGTGTGGATAGATCAGAGAACCCAGGTTTCTTTTTCAGTGCACTTCTCAACACGTTaGGGTCCATGGTTACATTTT | + |
|
Preference number: 5 (lower is better) Translates to: PCSSSVWIDQRTQVSFSVHFSTR*GPWLHF Trigger: AAAATGTAACCATGGACCCAAACGTGTTGAGAAGTG...CACTGAAAAAGAAACCTGGGTTCTCTGATCTATCCACACAGAACTAGAGCAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR CAA 90 bp | CAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTGAGGAAGGGCAGCGTTTCACTTaGAGTACATCCATATTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QRFTLSTSILVGSDLCEEGQRFT*STSILV Trigger: TACCAATATGGATGTACTCAAAGTGAAACGCTGCCC...TTCCTCACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTGTCCATGGTTACATTTaGCAAATATTGTTCCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TGQRFTLSTSILVGSDLCVHGYI*QILFQL Trigger: CAACTGGAACAATATTTGCAAAATGTAACCATGGAC...ACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTGCCCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR CAA 90 bp | TCAGAGAACCCAGGTTTCTTTTTCAGTGATTCCATTTCTCAGAGCCCTATTCTCCCAGCTCCAAAAACTTaGTTTGACTGTCTTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SENPGFFFSDSISQSPILPAPKT*FDCLLS Trigger: AGAAAGAAGACAGTCAAACAAAGTTTTTGGAGCTGG...GAGAATAGGGCTCTGAGAAATGGAATCACTGAAAAAGAAACCTGGGTTCTCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR CAA 90 bp | CCTTGCTCTAGTTCTGTGTGGATAGATCAGAGAACCCAGGTTTCTTTTTCAGTGAGGTGCAGAGCCTTATaGCTTTCCAAATTAAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: PCSSSVWIDQRTQVSFSVRCRAL*LSKLKH Trigger: ATGTTTTAATTTGGAAAGCAATAAGGCTCTGCACCT...CACTGAAAAAGAAACCTGGGTTCTCTGATCTATCCACACAGAACTAGAGCAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR CAA 90 bp | CAGCGTTTCACTTTGAGTACATCCATATTGGTAGGCTCAGACTTATGTGAGGAACTGTGGTATAATACCTaGATGAATACAGTCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: QRFTLSTSILVGSDLCEELWYNT*MNTVHV Trigger: AACATGGACTGTATTCATCAAGGTATTATACCACAG...TTCCTCACATAAGTCTGAGCCTACCAATATGGATGTACTCAAAGTGAAACGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR CAA 90 bp | CCCAAGTTCTTTCACTGTCTTGAGATAGCCTCCAAGGATATTTTAAAATATGAGCCCTATTCTCCTCCGTaGAAGAGTCACATCTTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: PKFFHCLEIASKDILKYEPYSPP*KSHIFR Trigger: TCTAAAGATGTGACTCTTCAACGGAGGAGAATAGGG...CTCATATTTTAAAATATCCTTGGAGGCTATCTCAAGACAGTGAAAGAACTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS-3UTR CAA 90 bp | CCCAAGTTCTTTCACTGTCTTGAGATAGCCTCCAAGGATATTTTAAAATATGAGCCAGCTCCAAAAACTTaGTTTGACTGTCTTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PKFFHCLEIASKDILKYEPAPKT*FDCLLS Trigger: AGAAAGAAGACAGTCAAACAAAGTTTTTGGAGCTGG...CTCATATTTTAAAATATCCTTGGAGGCTATCTCAAGACAGTGAAAGAACTTGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CAA 90 bp | CATAGAGTGCTGTGGTATAATACCTTGATGAATACAGTCCATGTTAATGCCAAACTCCAAAAACTTTGTTaGACTGTCTTCTTTCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HRVLWYNTLMNTVHVNAKLQKLC*TVFFLE Trigger: TTCCAGAAAGAAGACAGTCAAACAAAGTTTTTGGAG...TTTGGCATTAACATGGACTGTATTCATCAAGGTATTATACCACAGCACTCTATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS-3UTR CAA 90 bp | CCCAAGTTCTTTCACTGTCTTGAGATAGCCTCCAAGGATATTTTAAAATATGAGCTCCAAAAACTTTGTTaGACTGTCTTCTTTCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PKFFHCLEIASKDILKYELQKLC*TVFFLE Trigger: TTCCAGAAAGAAGACAGTCAAACAAAGTTTTTGGAG...CTCATATTTTAAAATATCCTTGGAGGCTATCTCAAGACAGTGAAAGAACTTGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS TCA 72 bp | GGAACCCGACCTGCGGCGGCGGGCGGTGCGCGGCTCTaGACTCGGCAGCGGTGGACGCAGCGCGGCCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GTRPAAAGGARL*TRQRWTQRGLP Trigger: TGGCAGGCCGCGCTGCGTCCACCGCTGCCGAGTTCAGAGCCGCGCACCGCCCGCCGCCGCAGGTCGGGTTCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS GCA 72 bp | GGCTCTGAACTCGGCAGCGGTGGACGCAGCGCGGCCTaGCACGCGACTCAGAGCGAACCCCGGCGCCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GSELGSGGRSAA*HATQSEPRRPL Trigger: GAGCGGGCGCCGGGGTTCGCTCTGAGTCGCGTGGCAGGCCGCGCTGCGTCCACCGCTGCCGAGTTCAGAGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS GCA 72 bp | GAGCGGTGTCTTGGGAGTAGCGCTGGGAACCCGACCTaGGGCGGCGGGCGGTGCGCGGCTCTGAACTCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ERCLGSSAGNPT*GGGRCAALNSA Trigger: TGCCGAGTTCAGAGCCGCGCACCGCCCGCCGCCGCAGGTCGGGTTCCCAGCGCTACTCCCAAGACACCGCTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS CAA 90 bp | GGGACACCGGGATACAGAAATGCATCTTCATGGCTGAGCGGTGTCTaGGGAGTAGCGCTGGGAACCCGACCTGCGGCGGCGGGCGGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: GTPGYRNASSWLSGV*GVALGTRPAAAGGA Trigger: CGCACCGCCCGCCGCCGCAGGTCGGGTTCCCAGCGCTACTCCCAAGACACCGCTCAGCCATGAAGATGCATTTCTGTATCCCGGTGTCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS GCA 72 bp | GTTCGTTCCAACCGTGCAGCTGGCTGTAGCGCACCCTaGAGAAGAGGAACCCGTCCAGGTGCACGGAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: VRSNRAAGCSAP*RRGTRPGARST Trigger: TGTACTCCGTGCACCTGGACGGGTTCCTCTTCTGCAGGGTGCGCTACAGCCAGCTGCACGGTTGGAACGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000520743.1 |
||
| CDS CAA 72 bp | GGATACAGAAATGCATCTTCATGGCTGAGCGGTGTCTaGGGAGTAGCGCTGGGAACCCGACCTGCGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GYRNASSWLSGV*GVALGTRPAAA Trigger: CGCCGCCGCAGGTCGGGTTCCCAGCGCTACTCCCAAGACACCGCTCAGCCATGAAGATGCATTTCTGTATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS GCA 72 bp | GCGTCGGACCGCTGCTGGGACACCGGGATACAGAAATaGATCTTCATGGCTGAGCGGTGTCTTGGGAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASDRCWDTGIQK*IFMAERCLGSS Trigger: GCTACTCCCAAGACACCGCTCAGCCATGAAGATGCATTTCTGTATCCCGGTGTCCCAGCAGCGGTCCGACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS CAA 72 bp | AGACCCGCCTTAGCTTTCGCGCAGCGCGTTTGCTACTaGAACGACGGGACCATCAGAAGCCCAGACCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RPALAFAQRVCY*NDGTIRSPDLS Trigger: GCTGAGGTCTGGGCTTCTGATGGTCCCGTCGTTCAAGTAGCAAACGCGCTGCGCGAAAGCTAAGGCGGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520352.5 |
||
| CDS CAA 90 bp | GGCAGGCAATTTCCAAAGACCCGCCTTAGCTTTCGCGCAGCGCGTTaGCTACTTGAACGACGGGACCATCAGAAGCCCAGACCTCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GRQFPKTRLSFRAAR*LLERRDHQKPRPQH Trigger: GTGCTGAGGTCTGGGCTTCTGATGGTCCCGTCGTTCAAGTAGCAAACGCGCTGCGCGAAAGCTAAGGCGGGTCTTTGGAAATTGCCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520352.5 |
||
| CDS CCA 72 bp | GCTGCTGGGACACCGGGATACAGAAATGCATCTTCATaGCTGAGCGGTGTCTTGGGAGTAGCGCTGGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: AAGTPGYRNASS*LSGVLGVALGT Trigger: GGTTCCCAGCGCTACTCCCAAGACACCGCTCAGCCATGAAGATGCATTTCTGTATCCCGGTGTCCCAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311812.7 |
||
| CDS CCA 72 bp | CAGCACTTCACCCTGCTCATCTGGAAAACGATGTCCTaGGTCTGGCTGTCAGGCAGGGTGATGCAGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QHFTLLIWKTMS*VWLSGRVMQQL Trigger: CAGCTGCTGCATCACCCTGCCTGACAGCCAGACCCAGGACATCGTTTTCCAGATGAGCAGGGTGAAGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS TCA 72 bp | GGTAGACTCCATCTTTCGCGCAGCGCGTTTGCTACTTaGACGACGGGACCATCAGAAGCCCAGACCTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GRLHLSRSAFAT*TTGPSEAQTSA Trigger: TGCTGAGGTCTGGGCTTCTGATGGTCCCGTCGTTCAAGTAGCAAACGCGCTGCGCGAAAGATGGAGTCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520661.5 ENST00000520743.1 |
||
| CDS GCA 72 bp | GTATTGCCTGCATGTAGAGCAAATCTACCGCCACCCTaGAGTCCATCAGCACGGAGTCGAGGGATGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLPACRANLPPP*SPSARSRGMEP Trigger: TGGCTCCATCCCTCGACTCCGTGCTGATGGACTGCAGGGTGGCGGTAGATTTGCTCTACATGCAGGCAATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS GCA 72 bp | TTCCAAAGACCCGCCTTAGCTTTCGCGCAGCGCGTTTaGTACTTGAACGACGGGACCATCAGAAGCCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: FQRPALAFAQRV*YLNDGTIRSPD Trigger: GTCTGGGCTTCTGATGGTCCCGTCGTTCAAGTAGCAAACGCGCTGCGCGAAAGCTAAGGCGGGTCTTTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520352.5 |
||
| CDS CCA 72 bp | AGGAAAGTGACCTGCCAGCACTTCACCCTGCTCATCTaGAAAACGATGTCCTGGGTCTGGCTGTCAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RKVTCQHFTLLI*KTMSWVWLSGR Trigger: CCTGCCTGACAGCCAGACCCAGGACATCGTTTTCCAGATGAGCAGGGTGAAGTGCTGGCAGGTCACTTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS TCA 72 bp | CAGGTGCACGGAGTACAGCTGGTGAAGGTCCAGAGGTaGAGAATGAAGTGGACTACTTGGGAGGCTGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QVHGVQLVKVQR*RMKWTTWEAEA Trigger: TGCCTCAGCCTCCCAAGTAGTCCACTTCATTCTTCACCTCTGGACCTTCACCAGCTGTACTCCGTGCACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520743.1 |
||
| CDS CCA 72 bp | TTCACCCTGCTCATCTGGAAAACGATGTCCTGGGTCTaGCTGTCAGGCAGGGTGATGCAGCAGCTGATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FTLLIWKTMSWV*LSGRVMQQLIS Trigger: TGAGATCAGCTGCTGCATCACCCTGCCTGACAGCCAGACCCAGGACATCGTTTTCCAGATGAGCAGGGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
||
| CDS CAA 72 bp | TTTCCAAAGACCCGCCTTAGCTTTCGCGCAGCGCGTTaGCTACTTGAACGACGGGACCATCAGAAGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FPKTRLSFRAAR*LLERRDHQKPR Trigger: TCTGGGCTTCTGATGGTCCCGTCGTTCAAGTAGCAAACGCGCTGCGCGAAAGCTAAGGCGGGTCTTTGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520352.5 |
||
| CDS CAA 90 bp | AATTTCCAAAGACCCGCCTTAGCTTTCGCGCAGCGCGTTTGCTACTaGAACGACGGGACCATCAGAAGCCCAGACCTCAGCACCATGCAA | + |
|
Preference number: 6 (lower is better) Translates to: NFQRPALAFAQRVCY*NDGTIRSPDLSTMQ Trigger: TTGCATGGTGCTGAGGTCTGGGCTTCTGATGGTCCCGTCGTTCAAGTAGCAAACGCGCTGCGCGAAAGCTAAGGCGGGTCTTTGGAAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520352.5 |
||
| CDS TCA 72 bp | TCACAACAGAGAGCTTGCCCTCCTTGCCAAACCGAATaGGAAAGAGGCCGAAGTAGCCCAAGAGCTCTCGAC | + |
|
Preference number: 6 (lower is better) Translates to: SQQRACPPCQTE*ERGRSSPRALD Trigger: GTCGAGAGCTCTTGGGCTACTTCGGCCTCTTTCTCATTCGGTTTGGCAAGGAGGGCAAGCTCTCTGTTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000311812.7 ENST00000428383.6 ENST00000520352.5 |
||
| CDS GCA 72 bp | TTGGTCCCTCCTCTCATCAGCCATAGCTGTGGTCATTaGCAGATAGTACTTTGGTGGGAAGGGTGGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LVPPLISHSCGH*QIVLWWEGWQA Trigger: TGCCTGCCACCCTTCCCACCAAAGTACTATCTGGCAATGACCACAGCTATGGCTGATGAGAGGAGGGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000311812.7 ENST00000520352.5 ENST00000520661.5 |
||
| CDS GCA 72 bp | ACGACGGGACCATCAGAAGCCCAGACCTCAGCACCATaGAATATACTCCGTCTAACAGAGCTGCGCAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: TTGPSEAQTSAP*NILRLTELRRY Trigger: GTATCTGCGCAGCTCTGTTAGACGGAGTATATTGCATGGTGCTGAGGTCTGGGCTTCTGATGGTCCCGTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520352.5 ENST00000520743.1 |
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| CDS GCA 72 bp | CCATCCGTATCCAGCAGAGTTCCAAGGAAAGTGACCTaGCAGCACTTCACCCTGCTCATCTGGAAAACGATG | + |
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Preference number: 6 (lower is better) Translates to: PSVSSRVPRKVT*QHFTLLIWKTM Trigger: CATCGTTTTCCAGATGAGCAGGGTGAAGTGCTGGCAGGTCACTTTCCTTGGAACTCTGCTGGATACGGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000311812.7 ENST00000428383.6 ENST00000519521.1 |
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| CDS CCA 72 bp | AAGCTTCTAATTTCTGCCTCTGTGCCTGTGTGGGTTTaGCCCATCCTTTTTCAATGTCCTGTATTGCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: KLLISASVPVWV*PILFQCPVLPA Trigger: TGCAGGCAATACAGGACATTGAAAAAGGATGGGCCAAACCCACACAGGCACAGAGGCAGAAATTAGAAGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS CAA 72 bp | AAAGCTTCTAATTTCTGCCTCTGTGCCTGTGTGGGTTaGGCCCATCCTTTTTCAATGTCCTGTATTGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: KASNFCLCACVG*AHPFSMSCIAC Trigger: GCAGGCAATACAGGACATTGAAAAAGGATGGGCCAAACCCACACAGGCACAGAGGCAGAAATTAGAAGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS CCA 72 bp | TCTGGAAAGCTTCTAATTTCTGCCTCTGTGCCTGTGTaGGTTTGGCCCATCCTTTTTCAATGTCCTGTATTG | + |
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Preference number: 6 (lower is better) Translates to: SGKLLISASVPV*VWPILFQCPVL Trigger: CAATACAGGACATTGAAAAAGGATGGGCCAAACCCACACAGGCACAGAGGCAGAAATTAGAAGCTTTCCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000311812.7 ENST00000428383.6 |
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| CDS TCA 72 bp | ATAACAAACCACTGCCAGCAACTATCCTCACTGTATTaGAATCTGAGCTCTAAGTTCTGGTTGAGAGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: ITNHCQQLSSLY*NLSSKFWLRVL Trigger: GAGAACTCTCAACCAGAACTTAGAGCTCAGATTTCAATACAGTGAGGATAGTTGCTGGCAGTGGTTTGTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000311812.7 ENST00000428383.6 ENST00000519521.1 |
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