RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNX27 (Homo sapiens)

Ensembl gene IDs: ENSG00000143376

Ensembl transcript IDs: ENST00000368838.2, ENST00000368841.7, ENST00000368843.8, ENST00000458013.7, ENST00000482791.2, ENST00000642349.1, ENST00000642376.1, ENST00000642479.1, ENST00000642582.1, ENST00000643179.1, ENST00000643814.1, ENST00000643845.1, ENST00000644970.1, ENST00000647328.1, ENST00000647454.1, ENST00000647551.1

Found 779 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGATCCACGCAGCCACAGGGAACCCGCCTCCATCACCCAAGGCCGTaGATGGGTGGAAGAGAAGAAGGCGCTGTCCTTTGGGGTGCCCTC +
Preference number: 1 (lower is better)
Translates to: GSTQPQGTRLHHPRP*MGGREEGAVLWGAL
Trigger: GAGGGCACCCCAAAGGACAGCGCCTTCTTCTCTTCCACCCATGCACGGCCTTGGGTGATGGAGGCGGGTTCCCTGTGGCTGCGTGGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CCA 90 bp TGGAGGAAGGCCAGTGAGAGACCAGGAGGATCCTGCTGGTTCTGCTaGGATGAAGCTGGGGGCACTGGGAGACCCCCTCTTCCCAGGGAC +
Preference number: 1 (lower is better)
Translates to: WRKASERPGGSCWFC*DEAGGTGRPPLPRD
Trigger: GTCCCTGGGAAGAGGGGGTCTCCCAGTGCCCCCAGCTTCATCCCAGCAGAACCAGCAGGATCCTCCTGGTCTCTCACTGGCCTTCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR TCA 90 bp GGGGAGAGAGAAGAGTCACAACACTGCTTCATGCAAAGAAGGGCTTaGTCCTATGGGATCCACGCAGCCACAGGGAACCCGCCTCCATCA +
Preference number: 1 (lower is better)
Translates to: GEREESQHCFMQRRA*SYGIHAATGNPPPS
Trigger: TGATGGAGGCGGGTTCCCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATGAAGCAGTGTTGTGACTCTTCTCTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CCA 90 bp CTACTCCTTCCTAGGTTCTCAGCTGGCTTGGATGGGGCTATCGTTTaGTTGGCACAGACCACTGACCCACTGCAAGTTTCCCCAAGGCCT +
Preference number: 1 (lower is better)
Translates to: LLLPRFSAGLDGAIV*LAQTTDPLQVSPRP
Trigger: AGGCCTTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAGAACCTAGGAAGGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CCA 90 bp AGAAGAGTCACAACACTGCTTCATGCAAAGAAGGGCTTGATCCTATaGGATCCACGCAGCCACAGGGAACCCGCCTCCATCACCCAAGGC +
Preference number: 1 (lower is better)
Translates to: RRVTTLLHAKKGLIL*DPRSHREPASITQG
Trigger: GCCTTGGGTGATGGAGGCGGGTTCCCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATGAAGCAGTGTTGTGACTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CCA 90 bp TCCTTCCTAGGTTCTCAGCTGGCTTGGATGGGGCTATCGTTTGGTTaGCACAGACCACTGACCCACTGCAAGTTTCCCCAAGGCCTTGAA +
Preference number: 1 (lower is better)
Translates to: SFLGSQLAWMGLSFG*HRPLTHCKFPQGLE
Trigger: TTCAAGGCCTTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAGAACCTAGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR GCA 90 bp GCTTGGATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCCACTaGAAGTTTCCCCAAGGCCTTGAAGATACTATTGGATCCCTTCCC +
Preference number: 1 (lower is better)
Translates to: AWMGLSFGWHRPLTH*KFPQGLEDTIGSLP
Trigger: GGGAAGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR GCA 90 bp GAAGTGCAGAGGAAGGGGAGAGAGAAGAGTCACAACACTGCTTCATaGAAAGAAGGGCTTGATCCTATGGGATCCACGCAGCCACAGGGA +
Preference number: 1 (lower is better)
Translates to: EVQRKGREKSHNTAS*KEGLDPMGSTQPQG
Trigger: TCCCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATGAAGCAGTGTTGTGACTCTTCTCTCTCCCCTTCCTCTGCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR TCA 90 bp CTCAGCTGGCTTGGATGGGGCTATCGTTTGGTTGGCACAGACCACTaGCCCACTGCAAGTTTCCCCAAGGCCTTGAAGATACTATTGGAT +
Preference number: 1 (lower is better)
Translates to: LSWLGWGYRLVGTDH*PTASFPKALKILLD
Trigger: ATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR GCA 90 bp CAGGCATGCAGTTTAAAGTGCGTGATGCTGATGGCTGTGATAACGTaGCCCTTCCTCCTGGAGTCACAGGCACAGTGGGGAAAGATGATT +
Preference number: 1 (lower is better)
Translates to: QACSLKCVMLMAVIT*PFLLESQAQWGKMI
Trigger: AATCATCTTTCCCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCATCAGCATCACGCACTTTAAACTGCATGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR TCA 90 bp TGGTTGGCACAGACCACTGACCCACTGCAAGTTTCCCCAAGGCCTTaGAGATACTATTGGATCCCTTCCCATCACTGCTGTTTAAGGAAG +
Preference number: 1 (lower is better)
Translates to: WLAQTTDPLQVSPRP*RYYWIPSHHCCLRK
Trigger: CTTCCTTAAACAGCAGTGATGGGAAGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR TCA 90 bp CATCTACCCATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTaGAGGTCAGCATTCAAGCTGTCGCATGGAATCCCAGCTCTGTTC +
Preference number: 1 (lower is better)
Translates to: HLPILRGLQIPMSHV*RSAFKLSHGIPALF
Trigger: GAACAGAGCTGGGATTCCATGCGACAGCTTGAATGCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAATGGGTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR GCA 90 bp AATGCAATTACCTGGTTCTCCAGCTGTCCTTCTTCAGTGCAGGCATaGAGTTTAAAGTGCGTGATGCTGATGGCTGTGATAACGTGCCCC +
Preference number: 1 (lower is better)
Translates to: NAITWFSSCPSSVQA*SLKCVMLMAVITCP
Trigger: GGGGCACGTTATCACAGCCATCAGCATCACGCACTTTAAACTGCATGCCTGCACTGAAGAAGGACAGCTGGAGAACCAGGTAATTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR CCA 90 bp GGGAGTCGAGGAAATGTAAAGTTGGCAAACTCTCTCTTCAGGTTCTaGTGTAGGATAGCAAACTCCCGGTACCGCTTAGAACACAGCTGC +
Preference number: 1 (lower is better)
Translates to: GSRGNVKLANSLFRF*CRIANSRYRLEHSC
Trigger: GCAGCTGTGTTCTAAGCGGTACCGGGAGTTTGCTATCCTACACCAGAACCTGAAGAGAGAGTTTGCCAACTTTACATTTCCTCGACTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR TCA 90 bp GATTGTCCCAACGAGTCGTCACTGGGATCTAGGTTATCTGCCTCATaGGGAGGTACAGATAACACTGTCAAGATCAATTCCTTCTCGCCT +
Preference number: 1 (lower is better)
Translates to: DCPNESSLGSRLSAS*GGTDNTVKINSFSP
Trigger: AGGCGAGAAGGAATTGATCTTGACAGTGTTATCTGTACCTCCTCATGAGGCAGATAACCTAGATCCCAGTGACGACTCGTTGGGACAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR TCA 90 bp GGCCAACTACCTATAGGGCCCTCACCTAATCTCCAAAGCACCAAGTaGATGCTATGCCAGAAAGGGAACATAACACCATCTACCCATTCT +
Preference number: 1 (lower is better)
Translates to: GQLPIGPSPNLQSTK*MLCQKGNITPSTHS
Trigger: AGAATGGGTAGATGGTGTTATGTTCCCTTTCTGGCATAGCATTCACTTGGTGCTTTGGAGATTAGGTGAGGGCCCTATAGGTAGTTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR GCA 90 bp ATATGGCGTGAAGATTTTAACCCATCGGGGCTTCTTCTCTCCTCGTaGATATTCGAAACAGAAGGCCATCCCTTCTTCATCTGTGTCCCA +
Preference number: 1 (lower is better)
Translates to: IWREDFNPSGLLLSS*IFETEGHPFFICVP
Trigger: TGGGACACAGATGAAGAAGGGATGGCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAGCCCCGATGGGTTAAAATCTTCACGCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR TCA 90 bp AAGCTGTCGCATGGAATCCCAGCTCTGTTCACTACTGTCCCACTCTaGGCGAGTAGGGGCAAATTGCTATTTTTACAGTTTGAACAAAGC +
Preference number: 1 (lower is better)
Translates to: KLSHGIPALFTTVPL*ASRGKLLFLQFEQS
Trigger: GCTTTGTTCAAACTGTAAAAATAGCAATTTGCCCCTACTCGCTCAGAGTGGGACAGTAGTGAACAGAGCTGGGATTCCATGCGACAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR TCA 90 bp AAACAGCAGTATGCTGGGGTCAACAGATCAAACAGCTTCTACTGCTaGATGAATCTAGCCAAACAGTATGATGGCGAGAAGGGAGAGCAC +
Preference number: 1 (lower is better)
Translates to: KQQYAGVNRSNSFYC*MNLAKQYDGEKGEH
Trigger: GTGCTCTCCCTTCTCGCCATCATACTGTTTGGCTAGATTCATTCAGCAGTAGAAGCTGTTTGATCTGTTGACCCCAGCATACTGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR GCA 90 bp TATTCGAAACAGAAGGCCATCCCTTCTTCATCTGTGTCCCATCGCTaGATCTCATCCCATTCAAATGCAATTACCTGGTTCTCCAGCTGT +
Preference number: 1 (lower is better)
Translates to: YSKQKAIPSSSVSHR*ISSHSNAITWFSSC
Trigger: ACAGCTGGAGAACCAGGTAATTGCATTTGAATGGGATGAGATGCAGCGATGGGACACAGATGAAGAAGGGATGGCCTTCTGTTTCGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR TCA 90 bp TGGGCTTATTTCTTTTCCTGCCTTAACTCAGTTGACTTCTGGTGCTaGCCGATCTGCTGTTCACTACCACCTCAATTCCAGAGACATGAA +
Preference number: 1 (lower is better)
Translates to: WAYFFSCLNSVDFWC*PICCSLPPQFQRHE
Trigger: TTCATGTCTCTGGAATTGAGGTGGTAGTGAACAGCAGATCGGTCAGCACCAGAAGTCAACTGAGTTAAGGCAGGAAAAGAAATAAGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR TCA 90 bp CCTCTGCAACTTTACACATTCAGCATTCTCACGTTTTGTACTCTGTaGTTTCACCTAGATTTGGAGAAGGTGAGGGAGGAAAGGCTGTCC +
Preference number: 1 (lower is better)
Translates to: PLQLYTFSILTFCTL*FHLDLEKVREERLS
Trigger: GGACAGCCTTTCCTCCCTCACCTTCTCCAAATCTAGGTGAAATCACAGAGTACAAAACGTGAGAATGCTGAATGTGTAAAGTTGCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CCA 90 bp AGAGGCTGTTGGTATGAGGCCCAGGTGAAAGGACAAAGATACCTTTaGCAAGTTGGTTGGGCTTATTTCTTTTCCTGCCTTAACTCAGTT +
Preference number: 1 (lower is better)
Translates to: RGCWYEAQVKGQRYL*QVGWAYFFSCLNSV
Trigger: AACTGAGTTAAGGCAGGAAAAGAAATAAGCCCAACCAACTTGCCAAAGGTATCTTTGTCCTTTCACCTGGGCCTCATACCAACAGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CCA 90 bp GTTAACCTTGAGAAACACACCTCTTTCTCCTCCCCAGCACCCTCTTaGAAGATAAAGAAACTATACTCCTTGTTCCTAGACTCTATGGCA +
Preference number: 1 (lower is better)
Translates to: VNLEKHTSFSSPAPS*KIKKLYSLFLDSMA
Trigger: TGCCATAGAGTCTAGGAACAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAAGAGGTGTGTTTCTCAAGGTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CCA 90 bp GCTTTTCTGTGTAATCATAAAATGATTGTCCCAACGAGTCGTCACTaGGATCTAGGTTATCTGCCTCATGAGGAGGTACAGATAACACTG +
Preference number: 1 (lower is better)
Translates to: AFLCNHKMIVPTSRH*DLGYLPHEEVQITL
Trigger: CAGTGTTATCTGTACCTCCTCATGAGGCAGATAACCTAGATCCCAGTGACGACTCGTTGGGACAATCATTTTATGATTACACAGAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR CCA 90 bp CTGTTTAAGGAAGTCACAGAGAATGCCGTAGTTATGGGTGGTTATTaGTCAGGAATGGAGGAGGTAAAACCTCATGTACATAGGGCATTT +
Preference number: 1 (lower is better)
Translates to: LFKEVTENAVVMGGY*SGMEEVKPHVHRAF
Trigger: AAATGCCCTATGTACATGAGGTTTTACCTCCTCCATTCCTGACCAATAACCACCCATAACTACGGCATTCTCTGTGACTTCCTTAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR TCA 90 bp TGTAAAAAGCCACTTTCGAATGGTCAAGCAGGTGCCTGGCACAGCTaGTGTATAATTCTGAATGTAGAGTTTGTGAGGAAACTCATTAGG +
Preference number: 1 (lower is better)
Translates to: CKKPLSNGQAGAWHS*CIILNVEFVRKLIR
Trigger: CCTAATGAGTTTCCTCACAAACTCTACATTCAGAATTATACATCAGCTGTGCCAGGCACCTGCTTGACCATTCGAAAGTGGCTTTTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR GCA 90 bp GCGAGTAGGGGCAAATTGCTATTTTTACAGTTTGAACAAAGCTGGTaGCAAGTCTCTTTAGCATCTAGGAGTGGGAAATCAACATGTCTT +
Preference number: 1 (lower is better)
Translates to: ASRGKLLFLQFEQSW*QVSLASRSGKSTCL
Trigger: AAGACATGTTGATTTCCCACTCCTAGATGCTAAAGAGACTTGGCACCAGCTTTGTTCAAACTGTAAAAATAGCAATTTGCCCCTACTCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR TCA 90 bp TTTAAAAATATAGTACAAGGAGAGGCTGTTGGTATGAGGCCCAGGTaGAAGGACAAAGATACCTTTGGCAAGTTGGTTGGGCTTATTTCT +
Preference number: 1 (lower is better)
Translates to: FKNIVQGEAVGMRPR*KDKDTFGKLVGLIS
Trigger: AGAAATAAGCCCAACCAACTTGCCAAAGGTATCTTTGTCCTTTCACCTGGGCCTCATACCAACAGCCTCTCCTTGTACTATATTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CCA 90 bp TATATACCACAAACTTCTCACCATTCTGCTCCACATGTTTGTATCTaGGGACCGATATGGGCACTGCTTGCTTTTCTGTGTAATCATAAA +
Preference number: 1 (lower is better)
Translates to: YIPQTSHHSAPHVCI*GPIWALLAFLCNHK
Trigger: TTTATGATTACACAGAAAAGCAAGCAGTGCCCATATCGGTCCCCAGATACAAACATGTGGAGCAGAATGGTGAGAAGTTTGTGGTATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR TCA 90 bp ACACACCATTGTAGTTCTCATCGGATTCTGATAGGAATTCCTGCATaGTGTCACTCTCACCAATTACTCGTATTGAACACACTTTTTCTA +
Preference number: 1 (lower is better)
Translates to: THHCSSHRILIGIPA*CHSHQLLVLNTLFL
Trigger: TAGAAAAAGTGTGTTCAATACGAGTAATTGGTGAGAGTGACATCATGCAGGAATTCCTATCAGAATCCGATGAGAACTACAATGGTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR CCA 90 bp CAGAAAGCAGAAAGGTTTTCGTTCAGTCTCCTTTCAATTAAAACTTaGGAGATCCAATCTAATCAACCATATTCCTACTACTCCTTCCTA +
Preference number: 1 (lower is better)
Translates to: QKAERFSFSLLSIKT*EIQSNQPYSYYSFL
Trigger: TAGGAAGGAGTAGTAGGAATATGGTTGATTAGATTGGATCTCCCAAGTTTTAATTGAAAGGAGACTGAACGAAAACCTTTCTGCTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR TCA 90 bp GAGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGAGGCAGAGGGTGCAGTaGGCCGAGATCGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: EGGKAVLFDPIPCRGKWLRQRVQ*AEIVPL
Trigger: CAGTGGCACGATCTCGGCTCACTGCACCCTCTGCCT...CAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR GCA 90 bp ATGCTGATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGGTGGCCACATCTCTCTaGTGTGACCTCGCCATCTGG +
Preference number: 2 (lower is better)
Translates to: MLMAVITCPFLLESQAQWVATSL*CDLAIW
Trigger: CCAGATGGCGAGGTCACAGCAGAGAGATGTGGCCAC...CCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCATCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR CAA 90 bp AGGGGAGAGAGAAGAGTCACAACACTGCTTCATGCAAAGAAGGGCTaGATCCTATGGGATCCACGCAGCCACAGGGAACCCGCCTCCATC +
Preference number: 2 (lower is better)
Translates to: RGERRVTTLLHAKKG*ILWDPRSHREPASI
Trigger: GATGGAGGCGGGTTCCCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATGAAGCAGTGTTGTGACTCTTCTCTCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR TCA 90 bp GATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGGGAAAGCAGAGGAGGGTCCATaGAGTCATGAGAGATGGAAG +
Preference number: 2 (lower is better)
Translates to: DGCDNVPLPPGVTGTVGKAEEGP*SHERWK
Trigger: CTTCCATCTCTCATGACTTCATGGACCCTCCTCTGC...TTTCCCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CCA 90 bp CCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGTAGAGGCCAACCTTGCTaGAAGAATGTCCTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: PGLIQSRRLQLRTASPVGRGQPC*KNVLAH
Trigger: GTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCT...ACCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR TCA 90 bp ACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTGAGAGGCTGTTGGTATaGGGCCCAGGTGAAAGGACA +
Preference number: 2 (lower is better)
Translates to: TSLLQLGALLLGHFQKGCERLLV*GPGERT
Trigger: TGTCCTTTCACCTGGGCCTCATACCAACAGCCTCTC...ACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR GCA 90 bp CTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGTGGCCACATCTCTCTaGTGTGACCTCGCCATCTGG +
Preference number: 2 (lower is better)
Translates to: LGSPRKTARTHPVKTATTVATSL*CDLAIW
Trigger: CCAGATGGCGAGGTCACAGCAGAGAGATGTGGCCAC...AGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR CCA 90 bp CACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGAGGTTCAGGTTCCCATaGCATCAACCTCCTGAGCCA +
Preference number: 2 (lower is better)
Translates to: HLLAAAGCVVTGTLSKGLRFRFP*HQPPEP
Trigger: TGGCTCAGGAGGTTGATGCCATGGGAACCTGAACCT...CAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CCA 90 bp ACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTGGGCTATCGTTTGGTTaGCACAGACCACTGACCCAC +
Preference number: 2 (lower is better)
Translates to: TSLLQLGALLLGHFQKGCGLSFG*HRPLTH
Trigger: GTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCC...ACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CCA 90 bp GAGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGGATGGGGCTATCGTTTaGTTGGCACAGACCACTGAC +
Preference number: 2 (lower is better)
Translates to: EGGKAVLFDPIPCRGKWLDGAIV*LAQTTD
Trigger: GTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATC...CAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR TCA 90 bp ATGCTGATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGAAAGGTATGCCTGGATaGCTCAATCTGATTGGCCAC +
Preference number: 2 (lower is better)
Translates to: MLMAVITCPFLLESQAQWKGMPG*LNLIGH
Trigger: GTGGCCAATCAGATTGAGTCATCCAGGCATACCTTT...CCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCATCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR TCA 90 bp TCTACCCATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCGTTGGCACAGACCACTaGCCCACTGCAAGTTTCCCC +
Preference number: 2 (lower is better)
Translates to: STHSKGPPNPYVSCLKVSVGTDH*PTASFP
Trigger: GGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAAC...GCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAATGGGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR TCA 90 bp CACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGGGTGGGCAGATTACTTaGGGTCAGGAGTTCAAAACC +
Preference number: 2 (lower is better)
Translates to: HLLAAAGCVVTGTLSKGLGGQIT*GQEFKT
Trigger: GGTTTTGAACTCCTGACCTCAAGTAATCTGCCCACC...CAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR GCA 90 bp TCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACTCCAGAGGCCAACCTTaGTGGAAGAATGTCCTGGCT +
Preference number: 2 (lower is better)
Translates to: SPRKTARTHPVKTATTEDSRGQP*WKNVLA
Trigger: AGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGA...GTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR GCA 90 bp CCATCGGGGCTTCTTCTCTCCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCTCCAGAGGCCAACCTTaGTGGAAGAATGTCCTGGCT +
Preference number: 2 (lower is better)
Translates to: PSGLLLSSCIFETEGHPFSRGQP*WKNVLA
Trigger: AGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGA...GAAGGGATGGCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAGCCCCGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CCA 90 bp CTGCTTCATGCAAAGAAGGGCTTGATCCTATGGGATCCACGCAGCCACAGGGAAAGGTTCAGGTTCCCATaGCATCAACCTCCTGAGCCA +
Preference number: 2 (lower is better)
Translates to: LLHAKKGLILWDPRSHRERFRFP*HQPPEP
Trigger: TGGCTCAGGAGGTTGATGCCATGGGAACCTGAACCT...TTCCCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATGAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CCA 90 bp GGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCATTCAAGCTGTCGCACTCAGCTGGCTTGGATaGGGCTATCGTTTGGTTGGC +
Preference number: 2 (lower is better)
Translates to: GPPNPYVSCLKVSIQAVALSWLG*GYRLVG
Trigger: GCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAG...TGCGACAGCTTGAATGCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CAA 90 bp TACCAGGACTTCAGGCTCTCCCTGCAGAACTACAGCCTGTTAACCTaGAGAAACACACCTCTTTCTCCTCCCCAGCACCCTCTTGGAAGA +
Preference number: 2 (lower is better)
Translates to: YQDFRLSLQNYSLLT*RNTPLSPPQHPLGR
Trigger: TCTTCCAAGAGGGTGCTGGGGAGGAGAAAGAGGTGTGTTTCTCAAGGTTAACAGGCTGTAGTTCTGCAGGGAGAGCCTGAAGTCCTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR TCA 90 bp AGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCAAAGGTATGCCTGGATaGCTCAATCTGATTGGCCAC +
Preference number: 2 (lower is better)
Translates to: REERLSSLIPYHAGANGCKGMPG*LNLIGH
Trigger: GTGGCCAATCAGATTGAGTCATCCAGGCATACCTTT...GCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368843.8
3UTR-3UTR TCA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCGTTGACTTCTGGTGCTaGCCGATCTGCTGTTCACTA +
Preference number: 2 (lower is better)
Translates to: GNIVLPQLALASDPGMQLVDFWC*PICCSL
Trigger: TAGTGAACAGCAGATCGGTCAGCACCAGAAGTCAAC...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR GCA 90 bp ATGCTGATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGGACCGATATGGGCACTaGTTGCTTTTCTGTGTAATC +
Preference number: 2 (lower is better)
Translates to: MLMAVITCPFLLESQAQWDRYGH*LLFCVI
Trigger: GATTACACAGAAAAGCAAGCAGTGCCCATATCGGTC...CCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCATCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR GCA 90 bp GCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGTCTGATAGGAATTCCTaGATGATGTCACTCTCACCA +
Preference number: 2 (lower is better)
Translates to: ARTHPVKTATTEDSFPCGSDRNS*MMSLSP
Trigger: TGGTGAGAGTGACATCATGCAGGAATTCCTATCAGA...CCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR GCA 90 bp ATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGGGAAAGCATGCCAACCTTTGCTaGGATAGCCTGATATACTTG +
Preference number: 2 (lower is better)
Translates to: MAVITCPFLLESQAQWGKHANLC*DSLIYL
Trigger: CAAGTATATCAGGCTATCGCAGCAAAGGTTGGCATG...CTTTCCCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR CCA 90 bp ATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAGGACAGCTTCCCCTGTaGGTCAGGAACAACATGGAG +
Preference number: 2 (lower is better)
Translates to: ILGSPRKTARTHPVKTATGQLPL*VRNNME
Trigger: CTCCATGTTGTTCCTGACCCACAGGGGAAGCTGTCC...TGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR CCA 90 bp ACCCACTGCAAGTTTCCCCAAGGCCTTGAAGATACTATTGGATCCCTTCCCATCGGACAGCTTCCCCTGTaGGTCAGGAACAACATGGAG +
Preference number: 2 (lower is better)
Translates to: THCKFPQGLEDTIGSLPIGQLPL*VRNNME
Trigger: CTCCATGTTGTTCCTGACCCACAGGGGAAGCTGTCC...GATGGGAAGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368843.8
3UTR-3UTR CCA 90 bp GCCCGTTCACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGATTCTGTTCCAGCACTaGCACATACAGACAGCAGTA +
Preference number: 2 (lower is better)
Translates to: ARSPSRGQPCWKNVLAHMILFQH*HIQTAV
Trigger: TACTGCTGTCTGTATGTGCCAGTGCTGGAACAGAAT...CATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGTGAACGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR TCA 90 bp ATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAGCAGAGGAGGGTCCATaGAGTCATGAGAGATGGAAG +
Preference number: 2 (lower is better)
Translates to: ILGSPRKTARTHPVKTATAEEGP*SHERWK
Trigger: CTTCCATCTCTCATGACTTCATGGACCCTCCTCTGC...TGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR TCA 90 bp ATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACACCTCTTTTCTCCACTTaGGCTCGCAGAACACCCTCT +
Preference number: 2 (lower is better)
Translates to: ILGSPRKTARTHPVKTATPLFST*ARRTPS
Trigger: AGAGGGTGTTCTGCGAGCTCAAGTGGAGAAAAGAGG...TGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR TCA 90 bp CTGCTTCATGCAAAGAAGGGCTTGATCCTATGGGATCCACGCAGCCACAGGGAAGGTATGAGGCCCAGGTaGAAGGACAAAGATACCTTT +
Preference number: 2 (lower is better)
Translates to: LLHAKKGLILWDPRSHREGMRPR*KDKDTF
Trigger: AAAGGTATCTTTGTCCTTTCACCTGGGCCTCATACC...TTCCCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR TCA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCGTTTCCCCAAGGCCTTaGAGATACTATTGGATCCCT +
Preference number: 2 (lower is better)
Translates to: GNIVLPQLALASDPGMQLVSPRP*RYYWIP
Trigger: AGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAAC...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR GCA 90 bp ATGCAGTTTAAAGTGCGTGATGCTGATGGCTGTGATAACGTGCCCCTTCCTCCTCAATTCCTTCTCGCCTaGTCGAATCAGGTCCACCAC +
Preference number: 2 (lower is better)
Translates to: MQFKVRDADGCDNVPLPPQFLLA*SNQVHH
Trigger: GTGGTGGACCTGATTCGAGCAGGCGAGAAGGAATTG...AGGAGGAAGGGGCACGTTATCACAGCCATCAGCATCACGCACTTTAAACTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR GCA 90 bp TGGGAGACCCCCTCTTCCCAGGGACAAATTGCAAAAGAAGTCTGGGTAGAAGCCAGTGAGCTATGTTCATaGCACCACATTCCAGTCTGG +
Preference number: 2 (lower is better)
Translates to: WETPSSQGQIAKEVWVEASELCS*HHIPVW
Trigger: CCAGACTGGAATGTGGTGGCATGAACATAGCTCACT...GGCTTCTACCCAGACTTCTTTTGCAATTTGTCCCTGGGAAGAGGGGGTCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR GCA 90 bp AGGTTCTCAGCTGGCTTGGATGGGGCTATCGTTTGGTTGGCACAGACCACTGACGGAAGTCACAGAGAATaGCGTAGTTATGGGTGGTTA +
Preference number: 2 (lower is better)
Translates to: RFSAGLDGAIVWLAQTTDGSHRE*RSYGWL
Trigger: TAACCACCCATAACTACGGCATTCTCTGTGACTTCC...GTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CCA 90 bp AGGTTCTCAGCTGGCTTGGATGGGGCTATCGTTTGGTTGGCACAGACCACTGACGTTATGGGTGGTTATTaGTCAGGAATGGAGGAGGTA +
Preference number: 2 (lower is better)
Translates to: RFSAGLDGAIVWLAQTTDVMGGY*SGMEEV
Trigger: TACCTCCTCCATTCCTGACCAATAACCACCCATAAC...GTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CAA 90 bp CAGTCCCCTTCAAGAAAACTACCTCCTAGGAGCCCAGCCCAGAAGTaGGCAAATTCTGAGATAGGAGAGAGTTTCATCTCCTGTCAGTGC +
Preference number: 2 (lower is better)
Translates to: QSPSRKLPPRSPAQK*ANSEIGESFISCQC
Trigger: GCACTGACAGGAGATGAAACTCTCTCCTATCTCAGAATTTGCCAACTTCTGGGCTGGGCTCCTAGGAGGTAGTTTTCTTGAAGGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR TCA 90 bp CCACAAACTTCTCACCATTCTGCTCCACATGTTTGTATCTGGGGACCGATATGGGCAGAGGAGGGTCCATaGAGTCATGAGAGATGGAAG +
Preference number: 2 (lower is better)
Translates to: PQTSHHSAPHVCIWGPIWAEEGP*SHERWK
Trigger: CTTCCATCTCTCATGACTTCATGGACCCTCCTCTGC...CCATATCGGTCCCCAGATACAAACATGTGGAGCAGAATGGTGAGAAGTTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR TCA 90 bp AGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGACAAGACGGCTACAACTaGGGACAGCTTCCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: SKATANTFPHTNILGSPRQDGYN*GQLPLW
Trigger: CCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTG...TCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR TCA 90 bp CTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTAAAGGTATGCCTGGATaGCTCAATCTGATTGGCCAC +
Preference number: 2 (lower is better)
Translates to: LGSPRKTARTHPVKTATTKGMPG*LNLIGH
Trigger: GTGGCCAATCAGATTGAGTCATCCAGGCATACCTTT...AGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR TCA 90 bp TTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACACATCTCTCTGCTGTaGCCTCGCCATCTGGAAAAT +
Preference number: 2 (lower is better)
Translates to: FLVRLERLPGLIQSRRLQHISLL*PRHLEN
Trigger: ATTTTCCAGATGGCGAGGTCACAGCAGAGAGATGTG...TTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR TCA 90 bp GCCCGTTCACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGTGTGTAATCATAAAATaGTTGTCCCAACGAGTCGTC +
Preference number: 2 (lower is better)
Translates to: ARSPSRGQPCWKNVLAHMCVIIK*LSQRVV
Trigger: GACGACTCGTTGGGACAATCATTTTATGATTACACA...CATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGTGAACGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR TCA 90 bp TCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACGGTGCCTGGCACAGCTaGTGTATAATTCTGAATGTA +
Preference number: 2 (lower is better)
Translates to: SPRKTARTHPVKTATTEDGAWHS*CIILNV
Trigger: TACATTCAGAATTATACATCAGCTGTGCCAGGCACC...GTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR TCA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTAGGTATGAGGCCCAGGTaGAAGGACAAAGATACCTTT +
Preference number: 2 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLGMRPR*KDKDTF
Trigger: AAAGGTATCTTTGTCCTTTCACCTGGGCCTCATACC...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR TCA 90 bp TTTCTCAGGGTCTACATTTTCTCCTGGGCCATAAAAAGCTCTGAGCTTCTACCCGAGAGGCTGTTGGTATaGGGCCCAGGTGAAAGGACA +
Preference number: 2 (lower is better)
Translates to: FLRVYIFSWAIKSSELLPERLLV*GPGERT
Trigger: TGTCCTTTCACCTGGGCCTCATACCAACAGCCTCTC...GGGTAGAAGCTCAGAGCTTTTTATGGCCCAGGAGAAAATGTAGACCCTGAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CCA 90 bp CACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTCCCCAGCACCCTCTTaGAAGATAAAGAAACTATAC +
Preference number: 2 (lower is better)
Translates to: HLLAAAGCVVTGTLSKGLSPAPS*KIKKLY
Trigger: GTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGA...CAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CCA 90 bp CTGCTTCATGCAAAGAAGGGCTTGATCCTATGGGATCCACGCAGCCACAGGGAAGTTATGGGTGGTTATTaGTCAGGAATGGAGGAGGTA +
Preference number: 2 (lower is better)
Translates to: LLHAKKGLILWDPRSHREVMGGY*SGMEEV
Trigger: TACCTCCTCCATTCCTGACCAATAACCACCCATAAC...TTCCCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATGAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CAA 90 bp ACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTaGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGG +
Preference number: 2 (lower is better)
Translates to: TAVKQQQTPSLTQTF*VRLERLPGLIQSRR
Trigger: CCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR CAA 90 bp TTTCACCTAGATTTGGAGAAGGTGAGGGAGGAAAGGCTGTCCTCTTaGATCCCATACCATGCAGGGGCAAATGGCTGCCAGCATAACAAA +
Preference number: 2 (lower is better)
Translates to: FHLDLEKVREERLSS*IPYHAGANGCQHNK
Trigger: TTTGTTATGCTGGCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCTCACCTTCTCCAAATCTAGGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR TCA 90 bp GAGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGTTTTCAAGTCCTTCATaGGGAGAGGTATTTTTCCCT +
Preference number: 2 (lower is better)
Translates to: EGGKAVLFDPIPCRGKWLFSSPS*GEVFFP
Trigger: AGGGAAAAATACCTCTCCTCATGAAGGACTTGAAAA...CAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR TCA 90 bp CTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCCAGCATAACAAACTCTATGGCAACCCATaGGCCGGAATCTATACTCAA +
Preference number: 2 (lower is better)
Translates to: LSSLIPYHAGANGCQHNKLYGNP*AGIYTQ
Trigger: TTGAGTATAGATTCCGGCTCATGGGTTGCCATAGAG...TTTGTTATGCTGGCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR GCA 90 bp ATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAGTCCATGCCAACCTTTaGTGCGATAGCCTGATATAC +
Preference number: 2 (lower is better)
Translates to: ILGSPRKTARTHPVKTATVHANL*CDSLIY
Trigger: GTATATCAGGCTATCGCAGCAAAGGTTGGCATGGAC...TGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR GCA 90 bp TTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAAGCATGCAGTTTAAAGTaGGTGATGCTGATGGCTGTG +
Preference number: 2 (lower is better)
Translates to: FLVRLERLPGLIQSRRLQACSLK*VMLMAV
Trigger: CACAGCCATCAGCATCACGCACTTTAAACTGCATGC...TTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR GCA 90 bp GTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGCTCATCCCATTCAAATaGAATTACCTGGTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: VRLERLPGLIQSRRLQLRLIPFK*NYLVLQ
Trigger: CTGGAGAACCAGGTAATTGCATTTGAATGGGATGAG...CCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR GCA 90 bp CTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTCTTCTTCTCTCCTCGTaGATATTCGAAACAGAAGGC +
Preference number: 2 (lower is better)
Translates to: LGSPRKTARTHPVKTATTLLLSS*IFETEG
Trigger: GCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAG...AGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CCA 90 bp GCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTAGAGGCCAACCTTGCTaGAAGAATGTCCTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: ATANTFPHTNILGSPRKTRGQPC*KNVLAH
Trigger: GTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCT...AGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR CCA 90 bp GGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCATTCAAGCTGTCGCAATTCTGTTCCAGCACTaGCACATACAGACAGCAGTA +
Preference number: 2 (lower is better)
Translates to: GPPNPYVSCLKVSIQAVAILFQH*HIQTAV
Trigger: TACTGCTGTCTGTATGTGCCAGTGCTGGAACAGAAT...TGCGACAGCTTGAATGCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
3UTR-3UTR TCA 90 bp CAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTGCAGAGGAGGGTCCATaGAGTCATGAGAGATGGAAG +
Preference number: 2 (lower is better)
Translates to: QTAVKQQQTPSLTQTFLVAEEGP*SHERWK
Trigger: CTTCCATCTCTCATGACTTCATGGACCCTCCTCTGC...AACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR TCA 90 bp GCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTCACATCTCTCTGCTGTaGCCTCGCCATCTGGAAAAT +
Preference number: 2 (lower is better)
Translates to: ATANTFPHTNILGSPRKTHISLL*PRHLEN
Trigger: ATTTTCCAGATGGCGAGGTCACAGCAGAGAGATGTG...AGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR TCA 90 bp ACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATAATCAGGTTATCTGCCTCATaGGGAGGTACAGATAACACT +
Preference number: 2 (lower is better)
Translates to: TIQRPTLLEECPGSHEIIRLSAS*GGTDNT
Trigger: AGTGTTATCTGTACCTCCTCATGAGGCAGATAACCT...GATTATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR TCA 90 bp ACCTCTTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGGTTGACTTCTGGTGCTaGCCGATCTGCTGTTCACTA +
Preference number: 2 (lower is better)
Translates to: TSFSSPAPSWKIKKLYSLVDFWC*PICCSL
Trigger: TAGTGAACAGCAGATCGGTCAGCACCAGAAGTCAAC...CAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR GCA 90 bp ATTCAAATGCAATTACCTGGTTCTCCAGCTGTCCTTCTTCAGTGCAGGCATGCAGAATGGTCAAGCAGGTaGCTGGCACAGCTGATGTAT +
Preference number: 2 (lower is better)
Translates to: IQMQLPGSPAVLLQCRHAEWSSR*LAQLMY
Trigger: ATACATCAGCTGTGCCAGGCACCTGCTTGACCATTC...TGCATGCCTGCACTGAAGAAGGACAGCTGGAGAACCAGGTAATTGCATTTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR GCA 90 bp ACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATAATCCTTCTTCTCTCCTCGTaGATATTCGAAACAGAAGGC +
Preference number: 2 (lower is better)
Translates to: TIQRPTLLEECPGSHEIILLLSS*IFETEG
Trigger: GCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAG...GATTATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR GCA 90 bp TCTACCCATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCGGAAGTCACAGAGAATaGCGTAGTTATGGGTGGTTA +
Preference number: 2 (lower is better)
Translates to: STHSKGPPNPYVSCLKVSGSHRE*RSYGWL
Trigger: TAACCACCCATAACTACGGCATTCTCTGTGACTTCC...GCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAATGGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR GCA 90 bp CACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGCGAGTAGGGGCAAATTaGTATTTTTACAGTTTGAAC +
Preference number: 2 (lower is better)
Translates to: HLLAAAGCVVTGTLSKGLRVGAN*YFYSLN
Trigger: GTTCAAACTGTAAAAATAGCAATTTGCCCCTACTCG...CAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CCA 90 bp ACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATAATCATTCTGTTCCAGCACTaGCACATACAGACAGCAGTA +
Preference number: 2 (lower is better)
Translates to: TIQRPTLLEECPGSHEIIILFQH*HIQTAV
Trigger: TACTGCTGTCTGTATGTGCCAGTGCTGGAACAGAAT...GATTATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR CCA 90 bp AGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCATCTGGGGACCGATATaGGCACTGCTTGCTTTTCTG +
Preference number: 2 (lower is better)
Translates to: SLLEPEGTLDINYVVQSSIWGPI*ALLAFL
Trigger: CAGAAAAGCAAGCAGTGCCCATATCGGTCCCCAGAT...GGAAGACTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CCA 90 bp GAGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGTCTGAACAGTGCAAATaGATGAAGTTCATAGTTCCA +
Preference number: 2 (lower is better)
Translates to: EGGKAVLFDPIPCRGKWLSEQCK*MKFIVP
Trigger: TGGAACTATGAACTTCATCCATTTGCACTGTTCAGA...CAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CCA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTATCCCCAGCACCCTCTTaGAAGATAAAGAAACTATAC +
Preference number: 2 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLSPAPS*KIKKLY
Trigger: GTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGA...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CAA 90 bp TTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTaGTTCCTAGACTCTATGGCAACCCATGAGCCGGAATCTATACTC +
Preference number: 2 (lower is better)
Translates to: FSSPAPSWKIKKLYS*FLDSMATHEPESIL
Trigger: GAGTATAGATTCCGGCTCATGGGTTGCCATAGAGTCTAGGAACAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR TCA 90 bp TCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACTTCATGTTCTTGACTTaGCCTCCTGATTCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: SPRKTARTHPVKTATTEDFMFLT*PPDSFK
Trigger: TTTGAAAGAATCAGGAGGTCAAGTCAAGAACATGAA...GTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR TCA 90 bp TCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACTGGCCACATCTTTCTTaGTATAACTTCTCATCTAGA +
Preference number: 2 (lower is better)
Translates to: SPRKTARTHPVKTATTEDWPHLS*YNFSSR
Trigger: TCTAGATGAGAAGTTATATCAAGAAAGATGTGGCCA...GTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR TCA 90 bp GAGCTCGCAGAACACCCTCTCGAAGCACTCATGCATGTAATTGAAATATGGCGTAGGTTATCTGCCTCATaGGGAGGTACAGATAACACT +
Preference number: 2 (lower is better)
Translates to: ELAEHPLEALMHVIEIWRRLSAS*GGTDNT
Trigger: AGTGTTATCTGTACCTCCTCATGAGGCAGATAACCT...ACGCCATATTTCAATTACATGCATGAGTGCTTCGAGAGGGTGTTCTGCGAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR TCA 90 bp TCGGGGCTTCTTCTCTCCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCTTCTGTGTAATCATAAAATaGTTGTCCCAACGAGTCGTC +
Preference number: 2 (lower is better)
Translates to: SGLLLSSCIFETEGHPFFCVIIK*LSQRVV
Trigger: GACGACTCGTTGGGACAATCATTTTATGATTACACA...GAAGAAGGGATGGCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAGCCCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR GCA 90 bp ATGCAGTTTAAAGTGCGTGATGCTGATGGCTGTGATAACGTGCCCCTTCCTCCTACACAGCTGCCTCCCTaGCATGTAAACATTATATAC +
Preference number: 2 (lower is better)
Translates to: MQFKVRDADGCDNVPLPPTQLPP*HVNIIY
Trigger: GTATATAATGTTTACATGGCAGGGAGGCAGCTGTGT...AGGAGGAAGGGGCACGTTATCACAGCCATCAGCATCACGCACTTTAAACTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR GCA 90 bp TTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCACATGCCAACCTTTGCTaGGATAGCCTGATATACTTG +
Preference number: 2 (lower is better)
Translates to: FPHTNILGSPRKTARTHPHANLC*DSLIYL
Trigger: CAAGTATATCAGGCTATCGCAGCAAAGGTTGGCATG...TGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CCA 90 bp TCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACTCTGAACAGTGCAAATaGATGAAGTTCATAGTTCCA +
Preference number: 2 (lower is better)
Translates to: SPRKTARTHPVKTATTEDSEQCK*MKFIVP
Trigger: TGGAACTATGAACTTCATCCATTTGCACTGTTCAGA...GTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
3UTR CAA 90 bp GATAATGAAAATGGCCACTTCCCTGGGAGTCGAGGAAATGTAAAGTaGGCAAACTCTCTCTTCAGGTTCTGGTGTAGGATAGCAAACTCC +
Preference number: 2 (lower is better)
Translates to: DNENGHFPGSRGNVK*ANSLFRFWCRIANS
Trigger: GGAGTTTGCTATCCTACACCAGAACCTGAAGAGAGAGTTTGCCAACTTTACATTTCCTCGACTCCCAGGGAAGTGGCCATTTTCATTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR CAA 90 bp TTTGGCAAGTTGGTTGGGCTTATTTCTTTTCCTGCCTTAACTCAGTaGACTTCTGGTGCTGACCGATCTGCTGTTCACTACCACCTCAAT +
Preference number: 2 (lower is better)
Translates to: FGKLVGLISFPALTQ*TSGADRSAVHYHLN
Trigger: ATTGAGGTGGTAGTGAACAGCAGATCGGTCAGCACCAGAAGTCAACTGAGTTAAGGCAGGAAAAGAAATAAGCCCAACCAACTTGCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR TCA 90 bp AGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCCACAGAAGAGAAAACTaGAAGCTAGGGAGGCTGATT +
Preference number: 2 (lower is better)
Translates to: SLLEPEGTLDINYVVQSSHRREN*KLGRLI
Trigger: AATCAGCCTCCCTAGCTTTCAGTTTTCTCTTCTGTG...GGAAGACTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR TCA 90 bp TTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAATGTCCTGGCTCACATaGGATAATCAGTCTCTAACT +
Preference number: 2 (lower is better)
Translates to: FPHTNILGSPRKTARTHPMSWLT*DNQSLT
Trigger: AGTTAGAGACTGATTATCTCATGTGAGCCAGGACAT...TGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR GCA 90 bp CTCATGCATGTAATTGAAATATGGCGTGAAGATTTTAACCCATCGGGGCTTCTTTCCAGAGGCCAACCTTaGTGGAAGAATGTCCTGGCT +
Preference number: 2 (lower is better)
Translates to: LMHVIEIWREDFNPSGLLSRGQP*WKNVLA
Trigger: AGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGA...AAGAAGCCCCGATGGGTTAAAATCTTCACGCCATATTTCAATTACATGCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR GCA 90 bp TTTTCTAGATATTCTTCCAATCCCCGACGTCGGGCATCTAATTGTTGTTCTGATCAATTCCTTCTCGCCTaGTCGAATCAGGTCCACCAC +
Preference number: 2 (lower is better)
Translates to: FSRYSSNPRRRASNCCSDQFLLA*SNQVHH
Trigger: GTGGTGGACCTGATTCGAGCAGGCGAGAAGGAATTG...ATCAGAACAACAATTAGATGCCCGACGTCGGGGATTGGAAGAATATCTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR GCA 90 bp CCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCTTCATCTGTGTCCCATCGCAGGAAACTCATTAGGTaGCAATTTACGTACAAAGGA +
Preference number: 2 (lower is better)
Translates to: PRAYSKQKAIPSSSVSHRRKLIR*QFTYKG
Trigger: TCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCT...GCGATGGGACACAGATGAAGAAGGGATGGCCTTCTGTTTCGAATATGCACGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR GCA 90 bp TCGGGGCTTCTTCTCTCCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCTTCAGGAAACTCATTAGGTaGCAATTTACGTACAAAGGA +
Preference number: 2 (lower is better)
Translates to: SGLLLSSCIFETEGHPFFRKLIR*QFTYKG
Trigger: TCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCT...GAAGAAGGGATGGCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAGCCCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR GCA 90 bp CAGGAGAAAACCCAGATAAAATTCCCAGAGCCCAATGTTCTTTCTACTGTACTAATGGCTGTGATAACGTaGCCCTTCCTCCTGGAGTCA +
Preference number: 2 (lower is better)
Translates to: QEKTQIKFPEPNVLSTVLMAVIT*PFLLES
Trigger: TGACTCCAGGAGGAAGGGGCACGTTATCACAGCCAT...TAGTACAGTAGAAAGAACATTGGGCTCTGGGAATTTTATCTGGGTTTTCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR GCA 90 bp CAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTGCATGCAGTTTAAAGTaGGTGATGCTGATGGCTGTG +
Preference number: 2 (lower is better)
Translates to: QTAVKQQQTPSLTQTFLVACSLK*VMLMAV
Trigger: CACAGCCATCAGCATCACGCACTTTAAACTGCATGC...AACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CCA 90 bp TCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCCTGGATCCACATGTTTGTATCTaGGGACCGATATGGGCACTG +
Preference number: 2 (lower is better)
Translates to: SSYLETTPQTEAKKVCLDPHVCI*GPIWAL
Trigger: CAGTGCCCATATCGGTCCCCAGATACAAACATGTGG...ATCCAGGCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CCA 90 bp TCCCACTCTGAGCGAGTAGGGGCAAATTGCTATTTTTACAGTTTGAACAAAGCTACAAGGAGAGGCTGTTaGTATGAGGCCCAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: SHSERVGANCYFYSLNKATRRGC*YEAQVK
Trigger: TTTCACCTGGGCCTCATACCAACAGCCTCTCCTTGT...AGCTTTGTTCAAACTGTAAAAATAGCAATTTGCCCCTACTCGCTCAGAGTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CCA 90 bp TCCCACTCTGAGCGAGTAGGGGCAAATTGCTATTTTTACAGTTTGAACAAAGCTGCACGAGGGAGGTCATaGATTCTAGTGAAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: SHSERVGANCYFYSLNKAARGRS*ILVKGV
Trigger: CACACCTTTCACTAGAATCCATGACCTCCCTCGTGC...AGCTTTGTTCAAACTGTAAAAATAGCAATTTGCCCCTACTCGCTCAGAGTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CCA 90 bp GGATCCCTCTGCAACTTTACACATTCAGCATTCTCACGTTTTGTACTCTGTGATGCACGAGGGAGGTCATaGATTCTAGTGAAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: GSLCNFTHSAFSRFVLCDARGRS*ILVKGV
Trigger: CACACCTTTCACTAGAATCCATGACCTCCCTCGTGC...ATCACAGAGTACAAAACGTGAGAATGCTGAATGTGTAAAGTTGCAGAGGGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR TCA 90 bp ACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATAATCCTTGACTTGACCTCCTaGTTCTTTCAAAGATTTTCT +
Preference number: 2 (lower is better)
Translates to: TIQRPTLLEECPGSHEIILDLTS*FFQRFS
Trigger: AGAAAATCTTTGAAAGAATCAGGAGGTCAAGTCAAG...GATTATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR TCA 90 bp ACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATAATCTTCATGTTCTTGACTTaGCCTCCTGATTCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: TIQRPTLLEECPGSHEIIFMFLT*PPDSFK
Trigger: TTTGAAAGAATCAGGAGGTCAAGTCAAGAACATGAA...GATTATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR TCA 90 bp CACATCTCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCAAAGGTATGCCTGGATaGCTCAATCTGATTGGCCAC +
Preference number: 2 (lower is better)
Translates to: HISSYLETTPQTEAKKVCKGMPG*LNLIGH
Trigger: GTGGCCAATCAGATTGAGTCATCCAGGCATACCTTT...GCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR TCA 90 bp CTCATGCATGTAATTGAAATATGGCGTGAAGATTTTAACCCATCGGGGCTTCTTCACATCTCTCTGCTGTaGCCTCGCCATCTGGAAAAT +
Preference number: 2 (lower is better)
Translates to: LMHVIEIWREDFNPSGLLHISLL*PRHLEN
Trigger: ATTTTCCAGATGGCGAGGTCACAGCAGAGAGATGTG...AAGAAGCCCCGATGGGTTAAAATCTTCACGCCATATTTCAATTACATGCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR TCA 90 bp GAGCTCGCAGAACACCCTCTCGAAGCACTCATGCATGTAATTGAAATATGGCGTATAGGAATTCCTGCATaGTGTCACTCTCACCAATTA +
Preference number: 2 (lower is better)
Translates to: ELAEHPLEALMHVIEIWRIGIPA*CHSHQL
Trigger: TAATTGGTGAGAGTGACATCATGCAGGAATTCCTAT...ACGCCATATTTCAATTACATGCATGAGTGCTTCGAGAGGGTGTTCTGCGAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR TCA 90 bp TGCAATTACCTGGTTCTCCAGCTGTCCTTCTTCAGTGCAGGCATGCAGTTTAAATTTGCTGCGATAGCCTaGTATACTTGGTCTGTAGTA +
Preference number: 2 (lower is better)
Translates to: CNYLVLQLSFFSAGMQFKFAAIA*YTWSVV
Trigger: TACTACAGACCAAGTATATCAGGCTATCGCAGCAAA...TTTAAACTGCATGCCTGCACTGAAGAAGGACAGCTGGAGAACCAGGTAATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR TCA 90 bp TCCCACTCTGAGCGAGTAGGGGCAAATTGCTATTTTTACAGTTTGAACAAAGCTCTCTATGGCAACCCATaGGCCGGAATCTATACTCAA +
Preference number: 2 (lower is better)
Translates to: SHSERVGANCYFYSLNKALYGNP*AGIYTQ
Trigger: TTGAGTATAGATTCCGGCTCATGGGTTGCCATAGAG...AGCTTTGTTCAAACTGTAAAAATAGCAATTTGCCCCTACTCGCTCAGAGTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR GCA 90 bp AGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCTCTGATAGGAATTCCTaGATGATGTCACTCTCACCA +
Preference number: 2 (lower is better)
Translates to: SLLEPEGTLDINYVVQSSSDRNS*MMSLSP
Trigger: TGGTGAGAGTGACATCATGCAGGAATTCCTATCAGA...GGAAGACTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR GCA 90 bp CACCCTCTCGAAGCACTCATGCATGTAATTGAAATATGGCGTGAAGATTTTAACGAATGGTCAAGCAGGTaGCTGGCACAGCTGATGTAT +
Preference number: 2 (lower is better)
Translates to: HPLEALMHVIEIWREDFNEWSSR*LAQLMY
Trigger: ATACATCAGCTGTGCCAGGCACCTGCTTGACCATTC...GTTAAAATCTTCACGCCATATTTCAATTACATGCATGAGTGCTTCGAGAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR GCA 90 bp CGTGAAGATTTTAACCCATCGGGGCTTCTTCTCTCCTCGTGCATATTCGAAACACTTCACATCATCGACTaGCTGATGAAAGAAGTAGGT +
Preference number: 2 (lower is better)
Translates to: REDFNPSGLLLSSCIFETLHIID*LMKEVG
Trigger: ACCTACTTCTTTCATCAGGCAGTCGATGATGTGAAG...TGTTTCGAATATGCACGAGGAGAGAAGAAGCCCCGATGGGTTAAAATCTTCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR CCA 90 bp GGAGAAAACCCAGATAAAATTCCCAGAGCCCAATGTTCTTTCTACTGTACTAAAAGAGGCCAACCTTGCTaGAAGAATGTCCTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: GENPDKIPRAQCSFYCTKRGQPC*KNVLAH
Trigger: GTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCT...TTTAGTACAGTAGAAAGAACATTGGGCTCTGGGAATTTTATCTGGGTTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR CCA 90 bp TGCAATTACCTGGTTCTCCAGCTGTCCTTCTTCAGTGCAGGCATGCAGTTTAAAACATCTCCTCTTATCTaGAGACAACTCCACAAACAG +
Preference number: 2 (lower is better)
Translates to: CNYLVLQLSFFSAGMQFKTSPLI*RQLHKQ
Trigger: CTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGT...TTTAAACTGCATGCCTGCACTGAAGAAGGACAGCTGGAGAACCAGGTAATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CCA 90 bp CTCATGCATGTAATTGAAATATGGCGTGAAGATTTTAACCCATCGGGGCTTCTTCCAACGAGTCGTCACTaGGATCTAGGTTATCTGCCT +
Preference number: 2 (lower is better)
Translates to: LMHVIEIWREDFNPSGLLPTSRH*DLGYLP
Trigger: AGGCAGATAACCTAGATCCCAGTGACGACTCGTTGG...AAGAAGCCCCGATGGGTTAAAATCTTCACGCCATATTTCAATTACATGCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CCA 90 bp GCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGGACAAAGATACCTTTaGCAAGTTGGTTGGGCTTAT +
Preference number: 2 (lower is better)
Translates to: ATANTFPHTNILGSPRKTGQRYL*QVGWAY
Trigger: ATAAGCCCAACCAACTTGCCAAAGGTATCTTTGTCC...AGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
3UTR-3UTR TCA 90 bp ATTCAAATGCAATTACCTGGTTCTCCAGCTGTCCTTCTTCAGTGCAGGCATGCAATAGGAATTCCTGCATaGTGTCACTCTCACCAATTA +
Preference number: 2 (lower is better)
Translates to: IQMQLPGSPAVLLQCRHAIGIPA*CHSHQL
Trigger: TAATTGGTGAGAGTGACATCATGCAGGAATTCCTAT...TGCATGCCTGCACTGAAGAAGGACAGCTGGAGAACCAGGTAATTGCATTTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR TCA 90 bp TGCAATTACCTGGTTCTCCAGCTGTCCTTCTTCAGTGCAGGCATGCAGTTTAAAATAGGAATTCCTGCATaGTGTCACTCTCACCAATTA +
Preference number: 2 (lower is better)
Translates to: CNYLVLQLSFFSAGMQFKIGIPA*CHSHQL
Trigger: TAATTGGTGAGAGTGACATCATGCAGGAATTCCTAT...TTTAAACTGCATGCCTGCACTGAAGAAGGACAGCTGGAGAACCAGGTAATTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR TCA 90 bp TTTCTCAGGGTCTACATTTTCTCCTGGGCCATAAAAAGCTCTGAGCTTCTACCCTTTTCAAGTCCTTCATaGGGAGAGGTATTTTTCCCT +
Preference number: 2 (lower is better)
Translates to: FLRVYIFSWAIKSSELLPFSSPS*GEVFFP
Trigger: AGGGAAAAATACCTCTCCTCATGAAGGACTTGAAAA...GGGTAGAAGCTCAGAGCTTTTTATGGCCCAGGAGAAAATGTAGACCCTGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR GCA 90 bp GGATCCCTCTGCAACTTTACACATTCAGCATTCTCACGTTTTGTACTCTGTGATGCAGGGGCAAATGGCTaGCAGCATAACAAAATAAGA +
Preference number: 2 (lower is better)
Translates to: GSLCNFTHSAFSRFVLCDAGANG*QHNKIR
Trigger: TCTTATTTTGTTATGCTGGCAGCCATTTGCCCCTGC...ATCACAGAGTACAAAACGTGAGAATGCTGAATGTGTAAAGTTGCAGAGGGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CCA 90 bp CAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTACATCTCCTCTTATCTaGAGACAACTCCACAAACAG +
Preference number: 2 (lower is better)
Translates to: QTAVKQQQTPSLTQTFLVTSPLI*RQLHKQ
Trigger: CTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGT...AACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR CCA 90 bp AATGTAGAGTTTGTGAGGAAACTCATTAGGTGCCAATTTACGTACAAAGGAGTGCCACATGTTTGTATCTaGGGACCGATATGGGCACTG +
Preference number: 2 (lower is better)
Translates to: NVEFVRKLIRCQFTYKGVPHVCI*GPIWAL
Trigger: CAGTGCCCATATCGGTCCCCAGATACAAACATGTGG...CACTCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCTCACAAACTCTACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CCA 90 bp CACATCTCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCTCTCTCTTCAGGTTCTaGTGTAGGATAGCAAACTCC +
Preference number: 2 (lower is better)
Translates to: HISSYLETTPQTEAKKVCSLFRF*CRIANS
Trigger: GGAGTTTGCTATCCTACACCAGAACCTGAAGAGAGA...GCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CCA 90 bp CAACACTGCTTAGTAGAATTGACTACAACCAATTATGACTGTCTCCCAGTTAGAACAAGGAGAGGCTGTTaGTATGAGGCCCAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: QHCLVELTTTNYDCLPVRTRRGC*YEAQVK
Trigger: TTTCACCTGGGCCTCATACCAACAGCCTCTCCTTGT...TCTAACTGGGAGACAGTCATAATTGGTTGTAGTCAATTCTACTAAGCAGTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CCA 90 bp GGATCCCTCTGCAACTTTACACATTCAGCATTCTCACGTTTTGTACTCTGTGATTGCCGTAGTTATGGGTaGTTATTGGTCAGGAATGGA +
Preference number: 2 (lower is better)
Translates to: GSLCNFTHSAFSRFVLCDCRSYG*LLVRNG
Trigger: TCCATTCCTGACCAATAACCACCCATAACTACGGCA...ATCACAGAGTACAAAACGTGAGAATGCTGAATGTGTAAAGTTGCAGAGGGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CCA 90 bp CAACACTGCTTAGTAGAATTGACTACAACCAATTATGACTGTCTCCCAGTTAGAACAGAGCTTAGGGGCTaGGAATATTGTCCTACCCCA +
Preference number: 2 (lower is better)
Translates to: QHCLVELTTTNYDCLPVRTELRG*EYCPTP
Trigger: TGGGGTAGGACAATATTCCCAGCCCCTAAGCTCTGT...TCTAACTGGGAGACAGTCATAATTGGTTGTAGTCAATTCTACTAAGCAGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR TCA 90 bp ATTCAAATGCAATTACCTGGTTCTCCAGCTGTCCTTCTTCAGTGCAGGCATGCACTTGACTTGACCTCCTaGTTCTTTCAAAGATTTTCT +
Preference number: 2 (lower is better)
Translates to: IQMQLPGSPAVLLQCRHALDLTS*FFQRFS
Trigger: AGAAAATCTTTGAAAGAATCAGGAGGTCAAGTCAAG...TGCATGCCTGCACTGAAGAAGGACAGCTGGAGAACCAGGTAATTGCATTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR TCA 90 bp GGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCTGTTTCACAGAAGAGAAACACAGAAGAGAAAACTaGAAGCTAGGGAGGCTGATT +
Preference number: 2 (lower is better)
Translates to: GTLDINYVVQSSCFTEEKHRREN*KLGRLI
Trigger: AATCAGCCTCCCTAGCTTTCAGTTTTCTCTTCTGTG...TTTCTCTTCTGTGAAACAGGAAGACTGAACCACGTAATTAATATCCAAGGTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR TCA 90 bp CACATCTCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCTTTGCTGCGATAGCCTaGTATACTTGGTCTGTAGTA +
Preference number: 2 (lower is better)
Translates to: HISSYLETTPQTEAKKVCFAAIA*YTWSVV
Trigger: TACTACAGACCAAGTATATCAGGCTATCGCAGCAAA...GCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR TCA 90 bp TGCAATTACCTGGTTCTCCAGCTGTCCTTCTTCAGTGCAGGCATGCAGTTTAAATTACGTACAAAGGAGTaGCTGATCACTTCAAATAAG +
Preference number: 2 (lower is better)
Translates to: CNYLVLQLSFFSAGMQFKLRTKE*LITSNK
Trigger: CTTATTTGAAGTGATCAGTCACTCCTTTGTACGTAA...TTTAAACTGCATGCCTGCACTGAAGAAGGACAGCTGGAGAACCAGGTAATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR GCA 90 bp AATGTAGAGTTTGTGAGGAAACTCATTAGGTGCCAATTTACGTACAAAGGAGTGGTCCATGCCAACCTTTaGTGCGATAGCCTGATATAC +
Preference number: 2 (lower is better)
Translates to: NVEFVRKLIRCQFTYKGVVHANL*CDSLIY
Trigger: GTATATCAGGCTATCGCAGCAAAGGTTGGCATGGAC...CACTCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCTCACAAACTCTACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR GCA 90 bp ATTCAAATGCAATTACCTGGTTCTCCAGCTGTCCTTCTTCAGTGCAGGCATGCAAGGAAACTCATTAGGTaGCAATTTACGTACAAAGGA +
Preference number: 2 (lower is better)
Translates to: IQMQLPGSPAVLLQCRHARKLIR*QFTYKG
Trigger: TCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCT...TGCATGCCTGCACTGAAGAAGGACAGCTGGAGAACCAGGTAATTGCATTTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR TCA 90 bp CTTCACATCATCGACTGCCTGATGAAAGAAGTAGGTAACAGCAAGGTCATTGTCTTCATGTTCTTGACTTaGCCTCCTGATTCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: LHIIDCLMKEVGNSKVIVFMFLT*PPDSFK
Trigger: TTTGAAAGAATCAGGAGGTCAAGTCAAGAACATGAA...GACAATGACCTTGCTGTTACCTACTTCTTTCATCAGGCAGTCGATGATGTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR GCA 90 bp AATGTAGAGTTTGTGAGGAAACTCATTAGGTGCCAATTTACGTACAAAGGAGTGCATGCCAACCTTTGCTaGGATAGCCTGATATACTTG +
Preference number: 2 (lower is better)
Translates to: NVEFVRKLIRCQFTYKGVHANLC*DSLIYL
Trigger: CAAGTATATCAGGCTATCGCAGCAAAGGTTGGCATG...CACTCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCTCACAAACTCTACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR GCA 90 bp GGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCTGTTTCACAGAAGAGAAACTTCACATCATCGACTaGCTGATGAAAGAAGTAGGT +
Preference number: 2 (lower is better)
Translates to: GTLDINYVVQSSCFTEEKLHIID*LMKEVG
Trigger: ACCTACTTCTTTCATCAGGCAGTCGATGATGTGAAG...TTTCTCTTCTGTGAAACAGGAAGACTGAACCACGTAATTAATATCCAAGGTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CCA 90 bp CAACACTGCTTAGTAGAATTGACTACAACCAATTATGACTGTCTCCCAGTTAGATGCCGTAGTTATGGGTaGTTATTGGTCAGGAATGGA +
Preference number: 2 (lower is better)
Translates to: QHCLVELTTTNYDCLPVRCRSYG*LLVRNG
Trigger: TCCATTCCTGACCAATAACCACCCATAACTACGGCA...TCTAACTGGGAGACAGTCATAATTGGTTGTAGTCAATTCTACTAAGCAGTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR TCA 90 bp AATGTAGAGTTTGTGAGGAAACTCATTAGGTGCCAATTTACGTACAAAGGAGTGTTTGCTGCGATAGCCTaGTATACTTGGTCTGTAGTA +
Preference number: 2 (lower is better)
Translates to: NVEFVRKLIRCQFTYKGVFAAIA*YTWSVV
Trigger: TACTACAGACCAAGTATATCAGGCTATCGCAGCAAA...CACTCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCTCACAAACTCTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR TCA 90 bp CAACACTGCTTAGTAGAATTGACTACAACCAATTATGACTGTCTCCCAGTTAGATCAATTCCAGAGACATaGAATTCAGAGGGGGTTATT +
Preference number: 2 (lower is better)
Translates to: QHCLVELTTTNYDCLPVRSIPET*NSEGVI
Trigger: AATAACCCCCTCTGAATTTCATGTCTCTGGAATTGA...TCTAACTGGGAGACAGTCATAATTGGTTGTAGTCAATTCTACTAAGCAGTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR GCA 90 bp CGTTCAGTCTCCTTTCAATTAAAACTTGGGAGATCCAATCTAATCAACCATATTATCCCTTCCCATCACTaGTGTTTAAGGAAGTCACAG +
Preference number: 2 (lower is better)
Translates to: RSVSFQLKLGRSNLINHIIPSHH*CLRKSQ
Trigger: CTGTGACTTCCTTAAACAGCAGTGATGGGAAGGGAT...AATATGGTTGATTAGATTGGATCTCCCAAGTTTTAATTGAAAGGAGACTGAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp CCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGTATCCAGAGGCCAACCTaGCTGGAAGAATGTCCTGGC +
Preference number: 3 (lower is better)
Translates to: PGLIQSRRLQLRTASPVGIQRPT*LEECPG
Trigger: GCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGAT...ACCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR CAA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCCTGAGCCAGGGTCGGTaGAGGGAAAGCATACCGAGG +
Preference number: 3 (lower is better)
Translates to: GNIVLPQLALASDPGMQLLSQGR*RESIPR
Trigger: CCTCGGTATGCTTTCCCTCAACCGACCCTGGCTCAG...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCGGGGCTATCGTTTGGTaGGCACAGACCACTGACCCA +
Preference number: 3 (lower is better)
Translates to: GNIVLPQLALASDPGMQLGAIVW*AQTTDP
Trigger: TGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCC...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR TCA 72 bp GACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTaGGGACAGCTTCCCCTGTGGGTCAGGAACAACATG +
Preference number: 3 (lower is better)
Translates to: DCQDSSSQDGYN*GQLPLWVRNNM
Trigger: CATGTTGTTCCTGACCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR GCA 72 bp GCAGAGGGCCCAAAGCATGGCCCAAGGGAACCTTTCTaGAGGGACAGGTTTCTCAGGGTCTACATTTTCTCC +
Preference number: 3 (lower is better)
Translates to: AEGPKHGPREPF*RDRFLRVYIFS
Trigger: GGAGAAAATGTAGACCCTGAGAAACCTGTCCCTGCAGAAAGGTTCCCTTGGGCCATGCTTTGGGCCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CCA 72 bp GGTTCTCAGCTGGCTTGGATGGGGCTATCGTTTGGTTaGCACAGACCACTGACCCACTGCAAGTTTCCCCAA +
Preference number: 3 (lower is better)
Translates to: GSQLAWMGLSFG*HRPLTHCKFPQ
Trigger: TTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CCA 72 bp CCTAGGTTCTCAGCTGGCTTGGATGGGGCTATCGTTTaGTTGGCACAGACCACTGACCCACTGCAAGTTTCC +
Preference number: 3 (lower is better)
Translates to: PRFSAGLDGAIV*LAQTTDPLQVS
Trigger: GGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAGAACCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CCA 72 bp ACAACACTGCTTCATGCAAAGAAGGGCTTGATCCTATaGGATCCACGCAGCCACAGGGAACCCGCCTCCATC +
Preference number: 3 (lower is better)
Translates to: TTLLHAKKGLIL*DPRSHREPASI
Trigger: GATGGAGGCGGGTTCCCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATGAAGCAGTGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR TCA 72 bp GAAGAGTCACAACACTGCTTCATGCAAAGAAGGGCTTaGTCCTATGGGATCCACGCAGCCACAGGGAACCCG +
Preference number: 3 (lower is better)
Translates to: EESQHCFMQRRA*SYGIHAATGNP
Trigger: CGGGTTCCCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATGAAGCAGTGTTGTGACTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR GCA 72 bp AGTTTAAAGTGCGTGATGCTGATGGCTGTGATAACGTaGCCCTTCCTCCTGGAGTCACAGGCACAGTGGGGA +
Preference number: 3 (lower is better)
Translates to: SLKCVMLMAVIT*PFLLESQAQWG
Trigger: TCCCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCATCAGCATCACGCACTTTAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR CAA 90 bp GTCATGAGAGATGGAAGAGCCTGTAGCCAATGTCCACCCTCTAGACAAGGGAAGATCCAGAGGCCAACCTaGCTGGAAGAATGTCCTGGC +
Preference number: 3 (lower is better)
Translates to: VMRDGRACSQCPPSRQGKIQRPT*LEECPG
Trigger: GCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGAT...CTTCCCTTGTCTAGAGGGTGGACATTGGCTACAGGCTCTTCCATCTCTCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR TCA 72 bp CTTGGATGGGGCTATCGTTTGGTTGGCACAGACCACTaGCCCACTGCAAGTTTCCCCAAGGCCTTGAAGATA +
Preference number: 3 (lower is better)
Translates to: LGWGYRLVGTDH*PTASFPKALKI
Trigger: TATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp TTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAAATCCAGAGGCCAACCTaGCTGGAAGAATGTCCTGGC +
Preference number: 3 (lower is better)
Translates to: FLVRLERLPGLIQSRRLQIQRPT*LEECPG
Trigger: GCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGAT...TTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR CAA 90 bp GCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGCGATATGGGCACTGCTaGCTTTTCTGTGTAATCATA +
Preference number: 3 (lower is better)
Translates to: ARTHPVKTATTEDSFPCGRYGHC*LFCVII
Trigger: TATGATTACACAGAAAAGCAAGCAGTGCCCATATCG...CCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CAA 90 bp AGGTTCTCAGCTGGCTTGGATGGGGCTATCGTTTGGTTGGCACAGACCACTGACGCCTTGAAGATACTATaGGATCCCTTCCCATCACTG +
Preference number: 3 (lower is better)
Translates to: RFSAGLDGAIVWLAQTTDALKIL*DPFPSL
Trigger: CAGTGATGGGAAGGGATCCAATAGTATCTTCAAGGC...GTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp AGGTTCTCAGCTGGCTTGGATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCTCCCCAGCACCCTCTaGGAAGATAAAGAAACTATA +
Preference number: 3 (lower is better)
Translates to: RFSAGLDGAIVWLAQTTDLPSTL*EDKETI
Trigger: TATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAG...GTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCAGTTTCCCCAAGGCCTaGAAGATACTATTGGATCCC +
Preference number: 3 (lower is better)
Translates to: GNIVLPQLALASDPGMQLSFPKA*KILLDP
Trigger: GGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACT...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR TCA 72 bp CAGACCACTGACCCACTGCAAGTTTCCCCAAGGCCTTaGAGATACTATTGGATCCCTTCCCATCACTGCTGT +
Preference number: 3 (lower is better)
Translates to: QTTDPLQVSPRP*RYYWIPSHHCC
Trigger: ACAGCAGTGATGGGAAGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGTCAGTGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR GCA 72 bp GGGCTATCGTTTGGTTGGCACAGACCACTGACCCACTaGAAGTTTCCCCAAGGCCTTGAAGATACTATTGGA +
Preference number: 3 (lower is better)
Translates to: GLSFGWHRPLTH*KFPQGLEDTIG
Trigger: TCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CCA 72 bp ATTACTACCATGAAGTGTTTCAGGTTCAGGTTCCCATaGCATCAACCTCCTGAGCCAGGGTCGGTTGAGGGA +
Preference number: 3 (lower is better)
Translates to: ITTMKCFRFRFP*HQPPEPGSVEG
Trigger: TCCCTCAACCGACCCTGGCTCAGGAGGTTGATGCCATGGGAACCTGAACCTGAAACACTTCATGGTAGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp CGTGAAGATTTTAACCCATCGGGGCTTCTTCTCTCCTCGTGCATATTCGAAACAATCCAGAGGCCAACCTaGCTGGAAGAATGTCCTGGC +
Preference number: 3 (lower is better)
Translates to: REDFNPSGLLLSSCIFETIQRPT*LEECPG
Trigger: GCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGAT...TGTTTCGAATATGCACGAGGAGAGAAGAAGCCCCGATGGGTTAAAATCTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CAA 90 bp ACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTAGGACAAAGATACCTTaGGCAAGTTGGTTGGGCTTA +
Preference number: 3 (lower is better)
Translates to: TSLLQLGALLLGHFQKGCRTKIP*ASWLGL
Trigger: TAAGCCCAACCAACTTGCCAAAGGTATCTTTGTCCT...ACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp TGGGAGACCCCCTCTTCCCAGGGACAAATTGCAAAAGAAGTCTGGGTAGAAGCCAGGACAAAGATACCTTaGGCAAGTTGGTTGGGCTTA +
Preference number: 3 (lower is better)
Translates to: WETPSSQGQIAKEVWVEARTKIP*ASWLGL
Trigger: TAAGCCCAACCAACTTGCCAAAGGTATCTTTGTCCT...GGCTTCTACCCAGACTTCTTTTGCAATTTGTCCCTGGGAAGAGGGGGTCTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp ACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTCTCCCCAGCACCCTCTaGGAAGATAAAGAAACTATA +
Preference number: 3 (lower is better)
Translates to: TSLLQLGALLLGHFQKGCLPSTL*EDKETI
Trigger: TATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAG...ACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp AGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCTACAGCCTGTTAACCTaGAGAAACACACCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: REERLSSLIPYHAGANGCYSLLT*RNTPLS
Trigger: AGAAAGAGGTGTGTTTCTCAAGGTTAACAGGCTGTA...GCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR TCA 72 bp CCTTCCTCCTGGAGTCACAGGCACAGTGGGGAAAGATaGTTTCATTGTAGCCCTCACAAGTCCTTAGCATGT +
Preference number: 3 (lower is better)
Translates to: PSSWSHRHSGER*FHCSPHKSLAC
Trigger: ACATGCTAAGGACTTGTGAGGGCTACAATGAAATCATCTTTCCCCACTGTGCCTGTGACTCCAGGAGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR TCA 72 bp TGGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTaGTCCTGGGATGCAGCTCTTAAGTCTCAAAGGGTC +
Preference number: 3 (lower is better)
Translates to: WEYCPTPISPGF*SWDAALKSQRV
Trigger: GACCCTTTGAGACTTAAGAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp TTTCTCAGGGTCTACATTTTCTCCTGGGCCATAAAAAGCTCTGAGCTTCTACCCCCTGCCTTAACTCAGTaGACTTCTGGTGCTGACCGA +
Preference number: 3 (lower is better)
Translates to: FLRVYIFSWAIKSSELLPPALTQ*TSGADR
Trigger: TCGGTCAGCACCAGAAGTCAACTGAGTTAAGGCAGG...GGGTAGAAGCTCAGAGCTTTTTATGGCCCAGGAGAAAATGTAGACCCTGAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp GGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCTGTTTCACAGAAGAGAAACTGAGCCAGGGTCGGTaGAGGGAAAGCATACCGAGG +
Preference number: 3 (lower is better)
Translates to: GTLDINYVVQSSCFTEEKLSQGR*RESIPR
Trigger: CCTCGGTATGCTTTCCCTCAACCGACCCTGGCTCAG...TTTCTCTTCTGTGAAACAGGAAGACTGAACCACGTAATTAATATCCAAGGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
3UTR TCA 72 bp ATAGTACAAGGAGAGGCTGTTGGTATGAGGCCCAGGTaGAAGGACAAAGATACCTTTGGCAAGTTGGTTGGG +
Preference number: 3 (lower is better)
Translates to: IVQGEAVGMRPR*KDKDTFGKLVG
Trigger: CCCAACCAACTTGCCAAAGGTATCTTTGTCCTTTCACCTGGGCCTCATACCAACAGCCTCTCCTTGTACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR TCA 72 bp ATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTaGAGGTCAGCATTCAAGCTGTCGCATGGAATCCCA +
Preference number: 3 (lower is better)
Translates to: ILRGLQIPMSHV*RSAFKLSHGIP
Trigger: TGGGATTCCATGCGACAGCTTGAATGCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR TCA 72 bp AGCATACCCACTATCTCTCTTCTCCCTCCCTCTCTCTaGGTGTTCTATCACATCATCCTCCCAAAGGAAGCT +
Preference number: 3 (lower is better)
Translates to: SIPTISLLPPSL*VFYHIILPKEA
Trigger: AGCTTCCTTTGGGAGGATGATGTGATAGAACACTCAGAGAGAGGGAGGGAGAAGAGAGATAGTGGGTATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp ACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTAAGAAACTATACTCCTaGTTCCTAGACTCTATGGCA +
Preference number: 3 (lower is better)
Translates to: TSLLQLGALLLGHFQKGCKKLYS*FLDSMA
Trigger: TGCCATAGAGTCTAGGAACAAGGAGTATAGTTTCTT...ACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp CACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGCACTGCTTAGTAGAATaGACTACAACCAATTATGAC +
Preference number: 3 (lower is better)
Translates to: HLLAAAGCVVTGTLSKGLHCLVE*TTTNYD
Trigger: GTCATAATTGGTTGTAGTCAATTCTACTAAGCAGTG...CAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp CTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTCAAGTCCTTAGCATGTaGAGGTACATGACCATTTTT +
Preference number: 3 (lower is better)
Translates to: LGSPRKTARTHPVKTATTQVLSM*RYMTIF
Trigger: AAAAATGGTCATGTACCTCAACATGCTAAGGACTTG...AGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR TCA 72 bp GATAAGGAAAGGCTAGGTGGCCACATCTCTCTGCTGTaGCCTCGCCATCTGGAAAATGTTCTGAAAGGAAAA +
Preference number: 3 (lower is better)
Translates to: DKERLGGHISLL*PRHLENVLKGK
Trigger: TTTTCCTTTCAGAACATTTTCCAGATGGCGAGGTCACAGCAGAGAGATGTGGCCACCTAGCCTTTCCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR TCA 72 bp CCTATAGGGCCCTCACCTAATCTCCAAAGCACCAAGTaGATGCTATGCCAGAAAGGGAACATAACACCATCT +
Preference number: 3 (lower is better)
Translates to: PIGPSPNLQSTK*MLCQKGNITPS
Trigger: AGATGGTGTTATGTTCCCTTTCTGGCATAGCATTCACTTGGTGCTTTGGAGATTAGGTGAGGGCCCTATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR GCA 72 bp GAAGATTTTAACCCATCGGGGCTTCTTCTCTCCTCGTaGATATTCGAAACAGAAGGCCATCCCTTCTTCATC +
Preference number: 3 (lower is better)
Translates to: EDFNPSGLLLSS*IFETEGHPFFI
Trigger: GATGAAGAAGGGATGGCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAGCCCCGATGGGTTAAAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR CCA 72 bp CAAACTTCTCACCATTCTGCTCCACATGTTTGTATCTaGGGACCGATATGGGCACTGCTTGCTTTTCTGTGT +
Preference number: 3 (lower is better)
Translates to: QTSHHSAPHVCI*GPIWALLAFLC
Trigger: ACACAGAAAAGCAAGCAGTGCCCATATCGGTCCCCAGATACAAACATGTGGAGCAGAATGGTGAGAAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CAA 90 bp CAGGAGAAAACCCAGATAAAATTCCCAGAGCCCAATGTTCTTTCTACTGTACTAAGAAGCAGGGCTTTTTaGCACAGCCCGTTCACCATC +
Preference number: 3 (lower is better)
Translates to: QEKTQIKFPEPNVLSTVLRSRAF*HSPFTI
Trigger: GATGGTGAACGGGCTGTGCAAAAAAGCCCTGCTTCT...TAGTACAGTAGAAAGAACATTGGGCTCTGGGAATTTTATCTGGGTTTTCTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR-3UTR CAA 90 bp ACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATAATCGATAGCCTGATATACTaGGTCTGTAGTACTGTTCTT +
Preference number: 3 (lower is better)
Translates to: TIQRPTLLEECPGSHEIIDSLIY*VCSTVL
Trigger: AAGAACAGTACTACAGACCAAGTATATCAGGCTATC...GATTATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CAA 90 bp GGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCTGTTTCACAGAAGAGAAATCCTCTTTTCTCCACTaGAGCTCGCAGAACACCCTC +
Preference number: 3 (lower is better)
Translates to: GTLDINYVVQSSCFTEEKSSFLH*SSQNTL
Trigger: GAGGGTGTTCTGCGAGCTCAAGTGGAGAAAAGAGGA...TTTCTCTTCTGTGAAACAGGAAGACTGAACCACGTAATTAATATCCAAGGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368841.7
3UTR-3UTR CAA 90 bp TCTACCCATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCGATACCTTTGGCAAGTaGGTTGGGCTTATTTCTTTT +
Preference number: 3 (lower is better)
Translates to: STHSKGPPNPYVSCLKVSDTFGK*VGLISF
Trigger: AAAAGAAATAAGCCCAACCAACTTGCCAAAGGTATC...GCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAATGGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR TCA 72 bp AACGAGTCGTCACTGGGATCTAGGTTATCTGCCTCATaGGGAGGTACAGATAACACTGTCAAGATCAATTCC +
Preference number: 3 (lower is better)
Translates to: NESSLGSRLSAS*GGTDNTVKINS
Trigger: GGAATTGATCTTGACAGTGTTATCTGTACCTCCTCATGAGGCAGATAACCTAGATCCCAGTGACGACTCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR TCA 72 bp CATGGAATCCCAGCTCTGTTCACTACTGTCCCACTCTaGGCGAGTAGGGGCAAATTGCTATTTTTACAGTTT +
Preference number: 3 (lower is better)
Translates to: HGIPALFTTVPL*ASRGKLLFLQF
Trigger: AAACTGTAAAAATAGCAATTTGCCCCTACTCGCTCAGAGTGGGACAGTAGTGAACAGAGCTGGGATTCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CCA 72 bp GGAAATGTAAAGTTGGCAAACTCTCTCTTCAGGTTCTaGTGTAGGATAGCAAACTCCCGGTACCGCTTAGAA +
Preference number: 3 (lower is better)
Translates to: GNVKLANSLFRF*CRIANSRYRLE
Trigger: TTCTAAGCGGTACCGGGAGTTTGCTATCCTACACCAGAACCTGAAGAGAGAGTTTGCCAACTTTACATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CAA 90 bp GAGCTCGCAGAACACCCTCTCGAAGCACTCATGCATGTAATTGAAATATGGCGTGATAGCCTGATATACTaGGTCTGTAGTACTGTTCTT +
Preference number: 3 (lower is better)
Translates to: ELAEHPLEALMHVIEIWRDSLIY*VCSTVL
Trigger: AAGAACAGTACTACAGACCAAGTATATCAGGCTATC...ACGCCATATTTCAATTACATGCATGAGTGCTTCGAGAGGGTGTTCTGCGAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR CAA 90 bp GAGCTCGCAGAACACCCTCTCGAAGCACTCATGCATGTAATTGAAATATGGCGTCAAGTCCTTAGCATGTaGAGGTACATGACCATTTTT +
Preference number: 3 (lower is better)
Translates to: ELAEHPLEALMHVIEIWRQVLSM*RYMTIF
Trigger: AAAAATGGTCATGTACCTCAACATGCTAAGGACTTG...ACGCCATATTTCAATTACATGCATGAGTGCTTCGAGAGGGTGTTCTGCGAGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR-3UTR CAA 90 bp TCCCACTCTGAGCGAGTAGGGGCAAATTGCTATTTTTACAGTTTGAACAAAGCTAGTTATGGGTGGTTATaGGTCAGGAATGGAGGAGGT +
Preference number: 3 (lower is better)
Translates to: SHSERVGANCYFYSLNKASYGWL*VRNGGG
Trigger: ACCTCCTCCATTCCTGACCAATAACCACCCATAACT...AGCTTTGTTCAAACTGTAAAAATAGCAATTTGCCCCTACTCGCTCAGAGTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp TCTACCCATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCCACTGCTTAGTAGAATaGACTACAACCAATTATGAC +
Preference number: 3 (lower is better)
Translates to: STHSKGPPNPYVSCLKVSHCLVE*TTTNYD
Trigger: GTCATAATTGGTTGTAGTCAATTCTACTAAGCAGTG...GCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAATGGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp TTTCTCAGGGTCTACATTTTCTCCTGGGCCATAAAAAGCTCTGAGCTTCTACCCCAGCATTCTCACGTTTaGTACTCTGTGATTTCACCT +
Preference number: 3 (lower is better)
Translates to: FLRVYIFSWAIKSSELLPQHSHV*YSVISP
Trigger: AGGTGAAATCACAGAGTACAAAACGTGAGAATGCTG...GGGTAGAAGCTCAGAGCTTTTTATGGCCCAGGAGAAAATGTAGACCCTGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR TCA 72 bp CCACTTTCGAATGGTCAAGCAGGTGCCTGGCACAGCTaGTGTATAATTCTGAATGTAGAGTTTGTGAGGAAA +
Preference number: 3 (lower is better)
Translates to: PLSNGQAGAWHS*CIILNVEFVRK
Trigger: TTTCCTCACAAACTCTACATTCAGAATTATACATCAGCTGTGCCAGGCACCTGCTTGACCATTCGAAAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
3UTR TCA 72 bp TATGCTGGGGTCAACAGATCAAACAGCTTCTACTGCTaGATGAATCTAGCCAAACAGTATGATGGCGAGAAG +
Preference number: 3 (lower is better)
Translates to: YAGVNRSNSFYC*MNLAKQYDGEK
Trigger: CTTCTCGCCATCATACTGTTTGGCTAGATTCATTCAGCAGTAGAAGCTGTTTGATCTGTTGACCCCAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CCA 72 bp TGTAATCATAAAATGATTGTCCCAACGAGTCGTCACTaGGATCTAGGTTATCTGCCTCATGAGGAGGTACAG +
Preference number: 3 (lower is better)
Translates to: CNHKMIVPTSRH*DLGYLPHEEVQ
Trigger: CTGTACCTCCTCATGAGGCAGATAACCTAGATCCCAGTGACGACTCGTTGGGACAATCATTTTATGATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR CCA 72 bp GAAGTCACAGAGAATGCCGTAGTTATGGGTGGTTATTaGTCAGGAATGGAGGAGGTAAAACCTCATGTACAT +
Preference number: 3 (lower is better)
Translates to: EVTENAVVMGGY*SGMEEVKPHVH
Trigger: ATGTACATGAGGTTTTACCTCCTCCATTCCTGACCAATAACCACCCATAACTACGGCATTCTCTGTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR-3UTR CAA 90 bp GGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCTGTTTCACAGAAGAGAAATTCTGCTCCACATGTTaGTATCTGGGGACCGATATG +
Preference number: 3 (lower is better)
Translates to: GTLDINYVVQSSCFTEEKFCSTC*YLGTDM
Trigger: CATATCGGTCCCCAGATACAAACATGTGGAGCAGAA...TTTCTCTTCTGTGAAACAGGAAGACTGAACCACGTAATTAATATCCAAGGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CAA 90 bp GCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGATACCTTTGGCAAGTaGGTTGGGCTTATTTCTTTT +
Preference number: 3 (lower is better)
Translates to: ATANTFPHTNILGSPRKTDTFGK*VGLISF
Trigger: AAAAGAAATAAGCCCAACCAACTTGCCAAAGGTATC...AGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
3UTR TCA 72 bp GAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATaGGATAATCAGTCTCTAACTAATATTCCTCTTTTC +
Preference number: 3 (lower is better)
Translates to: EANLAGRMSWLT*DNQSLTNIPLF
Trigger: GAAAAGAGGAATATTAGTTAGAGACTGATTATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368841.7
3UTR-3UTR CAA 90 bp CACATCTCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCCAAGTCCTTAGCATGTaGAGGTACATGACCATTTTT +
Preference number: 3 (lower is better)
Translates to: HISSYLETTPQTEAKKVCQVLSM*RYMTIF
Trigger: AAAAATGGTCATGTACCTCAACATGCTAAGGACTTG...GCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR-3UTR CAA 90 bp AGGAGTGGGAAATCAACATGTCTTCTTTTCAGGGTCCTTTGGCTCATTTTAAATGCATCTGAGCCTGACTaGGTGCTTCTTATGCATTAT +
Preference number: 3 (lower is better)
Translates to: RSGKSTCLLFRVLWLILNASEPD*VLLMHY
Trigger: ATAATGCATAAGAAGCACCAAGTCAGGCTCAGATGC...ATTTAAAATGAGCCAAAGGACCCTGAAAAGAAGACATGTTGATTTCCCACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR GCA 72 bp GGCAAATTGCTATTTTTACAGTTTGAACAAAGCTGGTaGCAAGTCTCTTTAGCATCTAGGAGTGGGAAATCA +
Preference number: 3 (lower is better)
Translates to: GKLLFLQFEQSW*QVSLASRSGKS
Trigger: TGATTTCCCACTCCTAGATGCTAAAGAGACTTGGCACCAGCTTTGTTCAAACTGTAAAAATAGCAATTTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CCA 72 bp AAAAAGAGTTATTGGGAAGGCACATCTCCTCTTATCTaGAGACAACTCCACAAACAGAAGCTAAAAAGGTAT +
Preference number: 3 (lower is better)
Translates to: KKSYWEGTSPLI*RQLHKQKLKRY
Trigger: ATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGTGCCTTCCCAATAACTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
3UTR CCA 72 bp GAAAGGTTTTCGTTCAGTCTCCTTTCAATTAAAACTTaGGAGATCCAATCTAATCAACCATATTCCTACTAC +
Preference number: 3 (lower is better)
Translates to: ERFSFSLLSIKT*EIQSNQPYSYY
Trigger: GTAGTAGGAATATGGTTGATTAGATTGGATCTCCCAAGTTTTAATTGAAAGGAGACTGAACGAAAACCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp CCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGTAGCCGGACTCGGACTTaGCGATGCGCACGACCCGCG +
Preference number: 4 (lower is better)
Translates to: PGLIQSRRLQLRTASPVGSRTRT*RCARPA
Trigger: CGCGGGTCGTGCGCATCGTCAAGTCCGAGTCCGGCT...ACCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000368843.8
CDS-3UTR TCA 90 bp ATGCTGATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGAGCCGGACTCGGACTTaGCGATGCGCACGACCCGCG +
Preference number: 4 (lower is better)
Translates to: MLMAVITCPFLLESQAQWSRTRT*RCARPA
Trigger: CGCGGGTCGTGCGCATCGTCAAGTCCGAGTCCGGCT...CCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCATCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642479.1
CDS-3UTR TCA 90 bp CCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGTCTTGGCCCCGCACGTTaGAGCCGTAGCCGGACTCGG +
Preference number: 4 (lower is better)
Translates to: PGLIQSRRLQLRTASPVGLGPAR*SRSRTR
Trigger: CCGAGTCCGGCTACGGCTTCAACGTGCGGGGCCAAG...ACCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp TCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACGGATGCGGTCCCCCTTaGGCACCCCGGCCCGATCGG +
Preference number: 4 (lower is better)
Translates to: SPRKTARTHPVKTATTEDGCGPP*APRPDR
Trigger: CCGATCGGGCCGGGGTGCGCAAGGGGGACCGCATCC...GTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp CACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGCTTGGCCCCGCACGTTaGAGCCGTAGCCGGACTCGG +
Preference number: 4 (lower is better)
Translates to: HLLAAAGCVVTGTLSKGLLGPAR*SRSRTR
Trigger: CCGAGTCCGGCTACGGCTTCAACGTGCGGGGCCAAG...CAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTAGGATGCGGTCCCCCTTaGGCACCCCGGCCCGATCGG +
Preference number: 4 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLGCGPP*APRPDR
Trigger: CCGATCGGGCCGGGGTGCGCAAGGGGGACCGCATCC...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp CTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTCGTGCTCGCCCTGCCTaGCAGCCGGACGACCCCCGA +
Preference number: 4 (lower is better)
Translates to: LGSPRKTARTHPVKTATTRARPA*QPDDPR
Trigger: TCGGGGGTCGTCCGGCTGCCAGGCAGGGCGAGCACG...AGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000368843.8
CDS-3UTR CCA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTACGTGCTCGCCCTGCCTaGCAGCCGGACGACCCCCGA +
Preference number: 4 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLRARPA*QPDDPR
Trigger: TCGGGGGTCGTCCGGCTGCCAGGCAGGGCGAGCACG...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp AGGTTCTCAGCTGGCTTGGATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCGTACAGCTCCCCGTTaGTGCTCCGCAGTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: RFSAGLDGAIVWLAQTTDRTAPR*CSAVAR
Trigger: GCGGGCAACTGCGGAGCATCAACGGGGAGCTGTACG...GTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp GATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGGGAAACGTGCCCCTTCCTCCTaGAGTCACAGGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: DGCDNVPLPPGVTGTVGKRAPSS*SHRHSG
Trigger: CCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACG...TTTCCCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR TCA 90 bp AGTTTAAAGTGCGTGATGCTGATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGCTTGGCCCCGCACGTTaGAGCCGTAGCCGGACTCGG +
Preference number: 4 (lower is better)
Translates to: SLKCVMLMAVITCPFLLELGPAR*SRSRTR
Trigger: CCGAGTCCGGCTACGGCTTCAACGTGCGGGGCCAAG...CTCCAGGAGGAAGGGGCACGTTATCACAGCCATCAGCATCACGCACTTTAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR CCA 90 bp GAGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCGTGCCCCTTCCTCCTaGAGTCACAGGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: EGGKAVLFDPIPCRGKWLRAPSS*SHRHSG
Trigger: CCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACG...CAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp GGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCATTCAAGCTGTCGCACCGCCCTCGCTCACTTaGCCCCGCACGTTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GPPNPYVSCLKVSIQAVAPPSLT*PRTLKP
Trigger: CGGCTTCAACGTGCGGGGCCAAGTGAGCGAGGGCGG...TGCGACAGCTTGAATGCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp GAGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGGAAGGCGCTGTCCTTTaGGGTGCCCTCCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: EGGKAVLFDPIPCRGKWLEGAVL*GALLPH
Trigger: GTGGGGAAGGAGGGCACCCCAAAGGACAGCGCCTTC...CAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp CCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGTCAAGACGGCTACAACTaGGGACAGCTTCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PGLIQSRRLQLRTASPVGQDGYN*GQLPLW
Trigger: CCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTG...ACCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp AGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCGTTCCTGTGAGGGGCTaGGGGATGAATCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: REERLSSLIPYHAGANGCVPVRG*GMNPFP
Trigger: GGGGAAGGGATTCATCCCTCAGCCCCTCACAGGAAC...GCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp GAGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGGTTCCTGTGAGGGGCTaGGGGATGAATCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: EGGKAVLFDPIPCRGKWLVPVRG*GMNPFP
Trigger: GGGGAAGGGATTCATCCCTCAGCCCCTCACAGGAAC...CAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp CTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCCAGCATAACAAAAGCCGGACTCGGACTTaGCGATGCGCACGACCCGCG +
Preference number: 4 (lower is better)
Translates to: LSSLIPYHAGANGCQHNKSRTRT*RCARPA
Trigger: CGCGGGTCGTGCGCATCGTCAAGTCCGAGTCCGGCT...TTTGTTATGCTGGCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGGGAAAGTGGCCACATCTCTCTaGTGTGACCTCGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: DGCDNVPLPPGVTGTVGKVATSL*CDLAIW
Trigger: CCAGATGGCGAGGTCACAGCAGAGAGATGTGGCCAC...TTTCCCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR GCA 90 bp CGTGAAGATTTTAACCCATCGGGGCTTCTTCTCTCCTCGTGCATATTCGAAACAGGATGCGGTCCCCCTTaGGCACCCCGGCCCGATCGG +
Preference number: 4 (lower is better)
Translates to: REDFNPSGLLLSSCIFETGCGPP*APRPDR
Trigger: CCGATCGGGCCGGGGTGCGCAAGGGGGACCGCATCC...TGTTTCGAATATGCACGAGGAGAGAAGAAGCCCCGATGGGTTAAAATCTTCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000642479.1
CDS-3UTR GCA 90 bp AGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGTCACCAAGAGGCAGAGGGTaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: RTHPVKTATTEDSFPCGSPRGRG*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCACCCTCTGCCTCTTGG...TGACCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp CCATCGGGGCTTCTTCTCTCCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCGTTCCTGTGAGGGGCTaGGGGATGAATCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PSGLLLSSCIFETEGHPFVPVRG*GMNPFP
Trigger: GGGGAAGGGATTCATCCCTCAGCCCCTCACAGGAAC...GAAGGGATGGCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAGCCCCGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642479.1
CDS-3UTR TCA 90 bp GAGCTCGCAGAACACCCTCTCGAAGCACTCATGCATGTAATTGAAATATGGCGTCTTGGCCCCGCACGTTaGAGCCGTAGCCGGACTCGG +
Preference number: 4 (lower is better)
Translates to: ELAEHPLEALMHVIEIWRLGPAR*SRSRTR
Trigger: CCGAGTCCGGCTACGGCTTCAACGTGCGGGGCCAAG...ACGCCATATTTCAATTACATGCATGAGTGCTTCGAGAGGGTGTTCTGCGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR TCA 90 bp ATGCAGTTTAAAGTGCGTGATGCTGATGGCTGTGATAACGTGCCCCTTCCTCCTCGTACAGCTCCCCGTTaGTGCTCCGCAGTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: MQFKVRDADGCDNVPLPPRTAPR*CSAVAR
Trigger: GCGGGCAACTGCGGAGCATCAACGGGGAGCTGTACG...AGGAGGAAGGGGCACGTTATCACAGCCATCAGCATCACGCACTTTAAACTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642479.1
CDS-3UTR GCA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCTTGATGCTCCGCAGTTaGCCGCCCTCGCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: GNIVLPQLALASDPGMQLLMLRS*PPSLTW
Trigger: CCAAGTGAGCGAGGGCGGGCAACTGCGGAGCATCAA...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp CCATCGGGGCTTCTTCTCTCCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCTTGATGCTCCGCAGTTaGCCGCCCTCGCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: PSGLLLSSCIFETEGHPFLMLRS*PPSLTW
Trigger: CCAAGTGAGCGAGGGCGGGCAACTGCGGAGCATCAA...GAAGGGATGGCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAGCCCCGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642479.1
CDS-3UTR GCA 90 bp TCTACCCATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCACGGCGCTCACATGCTaGAGCGGCGCGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: STHSKGPPNPYVSCLKVSTALTC*SGAYSS
Trigger: GGAGCTGTACGCGCCGCTGCAGCATGTGAGCGCCGT...GCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAATGGGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp ACCCACTGCAAGTTTCCCCAAGGCCTTGAAGATACTATTGGATCCCTTCCCATCACGGCGCTCACATGCTaGAGCGGCGCGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: THCKFPQGLEDTIGSLPITALTC*SGAYSS
Trigger: GGAGCTGTACGCGCCGCTGCAGCATGTGAGCGCCGT...GATGGGAAGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp TGGGAGACCCCCTCTTCCCAGGGACAAATTGCAAAAGAAGTCTGGGTAGAAGCCCCAAGAGGCAGAGGGTaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: WETPSSQGQIAKEVWVEAPRGRG*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCACCCTCTGCCTCTTGG...GGCTTCTACCCAGACTTCTTTTGCAATTTGTCCCTGGGAAGAGGGGGTCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp GTCATGAGAGATGGAAGAGCCTGTAGCCAATGTCCACCCTCTAGACAAGGGAAGCGTGCCCCTTCCTCCTaGAGTCACAGGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: VMRDGRACSQCPPSRQGKRAPSS*SHRHSG
Trigger: CCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACG...CTTCCCTTGTCTAGAGGGTGGACATTGGCTACAGGCTCTTCCATCTCTCATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp ATGCTGATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGGGACAGCTTCCCCTGTaGGTCAGGAACAACATGGAG +
Preference number: 4 (lower is better)
Translates to: MLMAVITCPFLLESQAQWGQLPL*VRNNME
Trigger: CTCCATGTTGTTCCTGACCCACAGGGGAAGCTGTCC...CCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCATCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR CCA 90 bp AGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCGAAGGCGCTGTCCTTTaGGGTGCCCTCCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: RKTARTHPVKTATTEDSFEGAVL*GALLPH
Trigger: GTGGGGAAGGAGGGCACCCCAAAGGACAGCGCCTTC...GAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp CTACTCTCAGCTCTACGTCGGACACACCATTGTAGTTCTCATCGGATTCTGATAAGCCGGACTCGGACTTaGCGATGCGCACGACCCGCG +
Preference number: 4 (lower is better)
Translates to: LLSALRRTHHCSSHRILISRTRT*RCARPA
Trigger: CGCGGGTCGTGCGCATCGTCAAGTCCGAGTCCGGCT...TATCAGAATCCGATGAGAACTACAATGGTGTGTCCGACGTAGAGCTGAGAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642479.1
CDS-3UTR TCA 90 bp GAGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGGAGAGGCTGTTGGTATaGGGCCCAGGTGAAAGGACA +
Preference number: 4 (lower is better)
Translates to: EGGKAVLFDPIPCRGKWLERLLV*GPGERT
Trigger: TGTCCTTTCACCTGGGCCTCATACCAACAGCCTCTC...CAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp ATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCCACTGCAAGTTTCCCCAAGTGGCCACATCTCTCTaGTGTGACCTCGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: MGLSFGWHRPLTHCKFPQVATSL*CDLAIW
Trigger: CCAGATGGCGAGGTCACAGCAGAGAGATGTGGCCAC...TTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GAGCTCGCAGAACACCCTCTCGAAGCACTCATGCATGTAATTGAAATATGGCGTACGGCGCTCACATGCTaGAGCGGCGCGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: ELAEHPLEALMHVIEIWRTALTC*SGAYSS
Trigger: GGAGCTGTACGCGCCGCTGCAGCATGTGAGCGCCGT...ACGCCATATTTCAATTACATGCATGAGTGCTTCGAGAGGGTGTTCTGCGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642479.1
CDS-3UTR GCA 90 bp ACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAGCACGGCGCTCACATaGTGCAGCGGCGCGTACAGC +
Preference number: 4 (lower is better)
Translates to: TANTFPHTNILGSPRKTASTALT*CSGAYS
Trigger: GCTGTACGCGCCGCTGCAGCATGTGAGCGCCGTGCT...GGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR GCA 90 bp TGGGAGACCCCCTCTTCCCAGGGACAAATTGCAAAAGAAGTCTGGGTAGAAGCCATCAGGTCCACCACCTaGTTGTGTGTCGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: WETPSSQGQIAKEVWVEAIRSTT*LCVAPS
Trigger: TGAGGGGGCGACACACAAGCAGGTGGTGGACCTGAT...GGCTTCTACCCAGACTTCTTTTGCAATTTGTCCCTGGGAAGAGGGGGTCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GAGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGAGGCCTGGCGTGATGTaGTCAGGTTTAGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: EGGKAVLFDPIPCRGKWLRPGVM*SGLGEQ
Trigger: CTGTTCCCCTAAACCTGAGCACATCACGCCAGGCCT...CAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp GCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGCCACATGTTTGTATCTaGGGACCGATATGGGCACTG +
Preference number: 4 (lower is better)
Translates to: ARTHPVKTATTEDSFPCGPHVCI*GPIWAL
Trigger: CAGTGCCCATATCGGTCCCCAGATACAAACATGTGG...CCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp GCCCGTTCACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGAGGCCAACCTTGCTaGAAGAATGTCCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: ARSPSRGQPCWKNVLAHMRGQPC*KNVLAH
Trigger: GTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCT...CATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGTGAACGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp ATTCAAATGCAATTACCTGGTTCTCCAGCTGTCCTTCTTCAGTGCAGGCATGCACCGCCCTCGCTCACTTaGCCCCGCACGTTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: IQMQLPGSPAVLLQCRHAPPSLT*PRTLKP
Trigger: CGGCTTCAACGTGCGGGGCCAAGTGAGCGAGGGCGG...TGCATGCCTGCACTGAAGAAGGACAGCTGGAGAACCAGGTAATTGCATTTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642479.1
CDS-3UTR CCA 90 bp GCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGATTGCAAAAGAAGTCTaGGTAGAAGCCTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ARTHPVKTATTEDSFPCGIAKEV*VEASLG
Trigger: GCCCAGGGAGGCTTCTACCCAGACTTCTTTTGCAAT...CCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368843.8
3UTR CAA 72 bp AGGTTCTCAGCTGGCTTGGATGGGGCTATCGTTTGGTaGGCACAGACCACTGACCCACTGCAAGTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: RFSAGLDGAIVW*AQTTDPLQVSP
Trigger: TGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp AGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGTCAGCAGAGGAGGGTCCATaGAGTCATGAGAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: RTHPVKTATTEDSFPCGSAEEGP*SHERWK
Trigger: CTTCCATCTCTCATGACTTCATGGACCCTCCTCTGC...TGACCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp AGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCAAGACGGCTACAACTaGGGACAGCTTCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: RKTARTHPVKTATTEDSFQDGYN*GQLPLW
Trigger: CCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTG...GAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp AGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGTCAATTAGCCCTGGCTTCTaGTCCTGGGATGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: RTHPVKTATTEDSFPCGSISPGF*SWDAAL
Trigger: AAGAGCTGCATCCCAGGATCAGAAGCCAGGGCTAAT...TGACCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp AGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCATTAGCCCTGGCTTCTaGTCCTGGGATGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: REERLSSLIPYHAGANGCISPGF*SWDAAL
Trigger: AAGAGCTGCATCCCAGGATCAGAAGCCAGGGCTAAT...GCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp CACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGAAAGGCTGTCCTCTTTaGTCCCATACCATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: HLLAAAGCVVTGTLSKGLKGCPL*SHTMQG
Trigger: CCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTT...CAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCATTCAAGCTGTCGCAGTGGCCACATCTCTCTaGTGTGACCTCGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: GPPNPYVSCLKVSIQAVAVATSL*CDLAIW
Trigger: CCAGATGGCGAGGTCACAGCAGAGAGATGTGGCCAC...TGCGACAGCTTGAATGCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp TTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGTTCCTACTCGGCCACCGAGCTaGTGGCGCGGGGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FLLPSTLLEDKETILLVPTRPPS*WRGVKR
Trigger: CCTCTTCACCCCGCGCCAGCAGCTCGGTGGCCGAGT...AGGAACAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR GCA 90 bp AGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCCTTGCTGCAGCTGGGTaGGTTGTTACTGGGACACTT +
Preference number: 4 (lower is better)
Translates to: REERLSSLIPYHAGANGCLAAAG*VVTGTL
Trigger: AAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG...GCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp ACCCACTGCAAGTTTCCCCAAGGCCTTGAAGATACTATTGGATCCCTTCCCATCGGATCCTGCTGGTTCTaGTGGGATGAAGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: THCKFPQGLEDTIGSLPIGSCWF*WDEAGG
Trigger: GCCCCCAGCTTCATCCCAGCAGAACCAGCAGGATCC...GATGGGAAGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp AGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCAGACCAGGAGGATCCTaGTGGTTCTGCTGGGATGAA +
Preference number: 4 (lower is better)
Translates to: REERLSSLIPYHAGANGCRPGGS*WFCWDE
Trigger: TTCATCCCAGCAGAACCAGCAGGATCCTCCTGGTCT...GCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp GATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGGGAAACCACATGTTTGTATCTaGGGACCGATATGGGCACTG +
Preference number: 4 (lower is better)
Translates to: DGCDNVPLPPGVTGTVGKPHVCI*GPIWAL
Trigger: CAGTGCCCATATCGGTCCCCAGATACAAACATGTGG...TTTCCCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR CCA 90 bp ATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGGGAAAGAAAGCCACTTTCGAATaGTCAAGCAGGTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: MAVITCPFLLESQAQWGKKATFE*SSRCLA
Trigger: TGCCAGGCACCTGCTTGACCATTCGAAAGTGGCTTT...CTTTCCCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR CCA 90 bp ACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCCGTGCCCCTTCCTCCTaGAGTCACAGGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: TANTFPHTNILGSPRKTARAPSS*SHRHSG
Trigger: CCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACG...GGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp GTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAACCGCCCTCGCTCACTTaGCCCCGCACGTTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: VKQQQTPSLTQTFLVRLEPPSLT*PRTLKP
Trigger: CGGCTTCAACGTGCGGGGCCAAGTGAGCGAGGGCGG...TTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTAACCCAAGGCCGTGCATaGGTGGAAGAGAAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLTQGRA*VEEKKA
Trigger: CGCCTTCTTCTCTTCCACCCATGCACGGCCTTGGGT...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTATCCTGCTGGTTCTGCTaGGATGAAGCTGGGGGCACT +
Preference number: 4 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLSCWFC*DEAGGT
Trigger: AGTGCCCCCAGCTTCATCCCAGCAGAACCAGCAGGA...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CAA 72 bp GATTTGGAGAAGGTGAGGGAGGAAAGGCTGTCCTCTTaGATCCCATACCATGCAGGGGCAAATGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: DLEKVREERLSS*IPYHAGANGCQ
Trigger: CTGGCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCTCACCTTCTCCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp ACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCGTTCCTGTGAGGGGCTaGGGGATGAATCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TANTFPHTNILGSPRKTAVPVRG*GMNPFP
Trigger: GGGGAAGGGATTCATCCCTCAGCCCCTCACAGGAAC...GGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000368843.8
CDS-3UTR TCA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTAGAGAGGCTGTTGGTATaGGGCCCAGGTGAAAGGACA +
Preference number: 4 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLERLLV*GPGERT
Trigger: TGTCCTTTCACCTGGGCCTCATACCAACAGCCTCTC...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp ACCCACTGCAAGTTTCCCCAAGGCCTTGAAGATACTATTGGATCCCTTCCCATCGTTGGCACAGACCACTaGCCCACTGCAAGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: THCKFPQGLEDTIGSLPIVGTDH*PTASFP
Trigger: GGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAAC...GATGGGAAGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp AGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCAGGCAGAGGGTGCAGTaGGCCGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SLLEPEGTLDINYVVQSSRQRVQ*AEIVPL
Trigger: CAGTGGCACGATCTCGGCTCACTGCACCCTCTGCCT...GGAAGACTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCACTACTGTCCCACTCTaGGCGAGTAGGGGCAAATTG +
Preference number: 4 (lower is better)
Translates to: GNIVLPQLALASDPGMQLTTVPL*ASRGKL
Trigger: CAATTTGCCCCTACTCGCTCAGAGTGGGACAGTAGT...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp TGGGAGACCCCCTCTTCCCAGGGACAAATTGCAAAAGAAGTCTGGGTAGAAGCCACTACTGTCCCACTCTaGGCGAGTAGGGGCAAATTG +
Preference number: 4 (lower is better)
Translates to: WETPSSQGQIAKEVWVEATTVPL*ASRGKL
Trigger: CAATTTGCCCCTACTCGCTCAGAGTGGGACAGTAGT...GGCTTCTACCCAGACTTCTTTTGCAATTTGTCCCTGGGAAGAGGGGGTCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp CACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGGGCCATAAAAAGCTCTaGGCTTCTACCCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: HLLAAAGCVVTGTLSKGLGHKKL*ASTPED
Trigger: ATCCTCAGGGGTAGAAGCTCAGAGCTTTTTATGGCC...CAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp AGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCCTCCCTCCCTCTCTCTaGGTGTTCTATCACATCATC +
Preference number: 4 (lower is better)
Translates to: REERLSSLIPYHAGANGCLPPSL*VFYHII
Trigger: GATGATGTGATAGAACACTCAGAGAGAGGGAGGGAG...GCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp AGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCTGGCCTGGGAAAAACTaGAGCCCAGCTCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: RKTARTHPVKTATTEDSFWPGKN*SPAHWL
Trigger: AAGCCAGTGAGCTGGGCTTCAGTTTTTCCCAGGCCA...GAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp GGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCATTCAAGCTGTCGCATGGCCTGGGAAAAACTaGAGCCCAGCTCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: GPPNPYVSCLKVSIQAVAWPGKN*SPAHWL
Trigger: AAGCCAGTGAGCTGGGCTTCAGTTTTTCCCAGGCCA...TGCGACAGCTTGAATGCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp AGGTTCTCAGCTGGCTTGGATGGGGCTATCGTTTGGTTGGCACAGACCACTGACTCTCTTTTCTCCACTTaGGCTCGCAGAACACCCTCT +
Preference number: 4 (lower is better)
Translates to: RFSAGLDGAIVWLAQTTDSLFST*ARRTPS
Trigger: AGAGGGTGTTCTGCGAGCTCAAGTGGAGAAAAGAGA...GTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458013.7
CDS-3UTR GCA 90 bp TCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACATGGCTGTGATAACGTaGCCCTTCCTCCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: SPRKTARTHPVKTATTEDMAVIT*PFLLES
Trigger: TGACTCCAGGAGGAAGGGGCACGTTATCACAGCCAT...GTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCATGGCTGTGATAACGTaGCCCTTCCTCCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: GNIVLPQLALASDPGMQLMAVIT*PFLLES
Trigger: TGACTCCAGGAGGAAGGGGCACGTTATCACAGCCAT...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GCCCGTTCACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGGCATGCAGTTTAAAGTaGGTGATGCTGATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ARSPSRGQPCWKNVLAHMACSLK*VMLMAV
Trigger: CACAGCCATCAGCATCACGCACTTTAAACTGCATGC...CATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGTGAACGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp ATTTCTTCTTCTGTTGTAAAAAGCCACTTTCGAATGGTCAAGCAGGTGCCTGGCCCTCGTCCGCCATCTTaGGAGCAGGCGAGCCGTACC +
Preference number: 4 (lower is better)
Translates to: ISSSVVKSHFRMVKQVPGPRPPS*EQASRT
Trigger: GGTACGGCTCGCCTGCTCGCAAGATGGCGGACGAGG...GCCAGGCACCTGCTTGACCATTCGAAAGTGGCTTTTTACAACAGAAGAAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368841.7
CDS-3UTR GCA 90 bp AGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGACCTCGTCCGCCATCTTaGGAGCAGGCGAGCCGTACC +
Preference number: 4 (lower is better)
Translates to: SKATANTFPHTNILGSPRPRPPS*EQASRT
Trigger: GGTACGGCTCGCCTGCTCGCAAGATGGCGGACGAGG...TCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000368843.8
CDS-3UTR GCA 90 bp ACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCTTGATGCTCCGCAGTTaGCCGCCCTCGCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: TANTFPHTNILGSPRKTALMLRS*PPSLTW
Trigger: CCAAGTGAGCGAGGGCGGGCAACTGCGGAGCATCAA...GGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR GCA 90 bp CTGCTTCATGCAAAGAAGGGCTTGATCCTATGGGATCCACGCAGCCACAGGGAACAATTCCTTCTCGCCTaGTCGAATCAGGTCCACCAC +
Preference number: 4 (lower is better)
Translates to: LLHAKKGLILWDPRSHREQFLLA*SNQVHH
Trigger: GTGGTGGACCTGATTCGAGCAGGCGAGAAGGAATTG...TTCCCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATGAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp AGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGTCATTTGATCCCATACCATaGAGGGGCAAATGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RTHPVKTATTEDSFPCGSFDPIP*RGKWLP
Trigger: TGGCAGCCATTTGCCCCTGCATGGTATGGGATCAAA...TGACCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR GCA 90 bp TGGGAGACCCCCTCTTCCCAGGGACAAATTGCAAAAGAAGTCTGGGTAGAAGCCCATCACCCAAGGCCGTaGATGGGTGGAAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: WETPSSQGQIAKEVWVEAHHPRP*MGGREE
Trigger: TTCTTCTCTTCCACCCATGCACGGCCTTGGGTGATG...GGCTTCTACCCAGACTTCTTTTGCAATTTGTCCCTGGGAAGAGGGGGTCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp CTGCTTCATGCAAAGAAGGGCTTGATCCTATGGGATCCACGCAGCCACAGGGAACCAAGGGAACCTTTCTaGAGGGACAGGTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLHAKKGLILWDPRSHREPREPF*RDRFLR
Trigger: CCTGAGAAACCTGTCCCTGCAGAAAGGTTCCCTTGG...TTCCCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATGAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp CTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTTCCAGGCCTAGGAGCTaGCCTGAGCATGCACATATC +
Preference number: 4 (lower is better)
Translates to: LGSPRKTARTHPVKTATTSRPRS*PEHAHI
Trigger: GATATGTGCATGCTCAGGGCAGCTCCTAGGCCTGGA...AGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp CACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGATCTGGGGACCGATATaGGCACTGCTTGCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: HLLAAAGCVVTGTLSKGLIWGPI*ALLAFL
Trigger: CAGAAAAGCAAGCAGTGCCCATATCGGTCCCCAGAT...CAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp GCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGTCTCTCTTCAGGTTCTaGTGTAGGATAGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: ARTHPVKTATTEDSFPCGSLFRF*CRIANS
Trigger: GGAGTTTGCTATCCTACACCAGAACCTGAAGAGAGA...CCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp GGAGAAAACCCAGATAAAATTCCCAGAGCCCAATGTTCTTTCTACTGTACTAAACGTGCTCGCCCTGCCTaGCAGCCGGACGACCCCCGA +
Preference number: 4 (lower is better)
Translates to: GENPDKIPRAQCSFYCTKRARPA*QPDDPR
Trigger: TCGGGGGTCGTCCGGCTGCCAGGCAGGGCGAGCACG...TTTAGTACAGTAGAAAGAACATTGGGCTCTGGGAATTTTATCTGGGTTTTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000368843.8
CDS-3UTR CCA 90 bp AGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCGCACGAGGGAGGTCATaGATTCTAGTGAAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: REERLSSLIPYHAGANGCARGRS*ILVKGV
Trigger: CACACCTTTCACTAGAATCCATGACCTCCCTCGTGC...GCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp ACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTAGGTTCAGGTTCCCATaGCATCAACCTCCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: TSLLQLGALLLGHFQKGCRFRFP*HQPPEP
Trigger: TGGCTCAGGAGGTTGATGCCATGGGAACCTGAACCT...ACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp AGGTTCTCAGCTGGCTTGGATGGGGCTATCGTTTGGTTGGCACAGACCACTGACACAGAGCTTAGGGGCTaGGAATATTGTCCTACCCCA +
Preference number: 4 (lower is better)
Translates to: RFSAGLDGAIVWLAQTTDTELRG*EYCPTP
Trigger: TGGGGTAGGACAATATTCCCAGCCCCTAAGCTCTGT...GTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp CTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTAAGGGCTTGATCCTATaGGATCCACGCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: LGSPRKTARTHPVKTATTKGLIL*DPRSHR
Trigger: CCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTT...AGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTAGGCAGCAAAGAGGCCTaGCGTGATGTGCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLGSKEA*RDVLRF
Trigger: AAACCTGAGCACATCACGCCAGGCCTCTTTGCTGCC...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp CACTGTCGTACTGTCCATGCCAACCTTTGCTGCGATAGCCTGATATACTTGGTCCATTCACGTGGTTCTTaGCCCCGCACGTTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: HCRTVHANLCCDSLIYLVHSRGS*PRTLKP
Trigger: CGGCTTCAACGTGCGGGGCCAAGAACCACGTGAATG...GACCAAGTATATCAGGCTATCGCAGCAAAGGTTGGCATGGACAGTACGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR CCA 90 bp AGTTTAAAGTGCGTGATGCTGATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGCCCTCAACATTCACGTaGTTCTTGGCCCCGCACGTT +
Preference number: 4 (lower is better)
Translates to: SLKCVMLMAVITCPFLLEPSTFT*FLAPHV
Trigger: AACGTGCGGGGCCAAGAACCACGTGAATGTTGAGGG...CTCCAGGAGGAAGGGGCACGTTATCACAGCCATCAGCATCACGCACTTTAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR CAA 72 bp TTCAGGCTCTCCCTGCAGAACTACAGCCTGTTAACCTaGAGAAACACACCTCTTTCTCCTCCCCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: FRLSLQNYSLLT*RNTPLSPPQHP
Trigger: AGGGTGCTGGGGAGGAGAAAGAGGTGTGTTTCTCAAGGTTAACAGGCTGTAGTTCTGCAGGGAGAGCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CAA 72 bp AGAAGAGTCACAACACTGCTTCATGCAAAGAAGGGCTaGATCCTATGGGATCCACGCAGCCACAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: RRVTTLLHAKKG*ILWDPRSHREP
Trigger: GGGTTCCCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATGAAGCAGTGTTGTGACTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp GGATCCCTCTGCAACTTTACACATTCAGCATTCTCACGTTTTGTACTCTGTGATCGTACAGCTCCCCGTTaGTGCTCCGCAGTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: GSLCNFTHSAFSRFVLCDRTAPR*CSAVAR
Trigger: GCGGGCAACTGCGGAGCATCAACGGGGAGCTGTACG...ATCACAGAGTACAAAACGTGAGAATGCTGAATGTGTAAAGTTGCAGAGGGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp CTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTCCTCTTTTCTCCACTTaGGCTCGCAGAACACCCTCT +
Preference number: 4 (lower is better)
Translates to: LGSPRKTARTHPVKTATTPLFST*ARRTPS
Trigger: AGAGGGTGTTCTGCGAGCTCAAGTGGAGAAAAGAGG...AGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp TGGGAGACCCCCTCTTCCCAGGGACAAATTGCAAAAGAAGTCTGGGTAGAAGCCGTTGACTTCTGGTGCTaGCCGATCTGCTGTTCACTA +
Preference number: 4 (lower is better)
Translates to: WETPSSQGQIAKEVWVEAVDFWC*PICCSL
Trigger: TAGTGAACAGCAGATCGGTCAGCACCAGAAGTCAAC...GGCTTCTACCCAGACTTCTTTTGCAATTTGTCCCTGGGAAGAGGGGGTCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp TTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGTTCCTAGGCAGAGGGTGCAGTaGGCCGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: FLLPSTLLEDKETILLVPRQRVQ*AEIVPL
Trigger: CAGTGGCACGATCTCGGCTCACTGCACCCTCTGCCT...AGGAACAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTAAAAGGCTGTCCTCTTTaGTCCCATACCATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLKGCPL*SHTMQG
Trigger: CCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTT...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGGGAAACATGCCAACCTTTGCTaGGATAGCCTGATATACTTG +
Preference number: 4 (lower is better)
Translates to: DGCDNVPLPPGVTGTVGKHANLC*DSLIYL
Trigger: CAAGTATATCAGGCTATCGCAGCAAAGGTTGGCATG...TTTCCCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp AGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCGTCCATGCCAACCTTTaGTGCGATAGCCTGATATAC +
Preference number: 4 (lower is better)
Translates to: REERLSSLIPYHAGANGCVHANL*CDSLIY
Trigger: GTATATCAGGCTATCGCAGCAAAGGTTGGCATGGAC...GCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp ACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTGAATGGTCAAGCAGGTaGCTGGCACAGCTGATGTAT +
Preference number: 4 (lower is better)
Translates to: TSLLQLGALLLGHFQKGCEWSSR*LAQLMY
Trigger: ATACATCAGCTGTGCCAGGCACCTGCTTGACCATTC...ACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp CCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCTTCATCTGTGTCCCATCGCATGGCTGTGATAACGTaGCCCTTCCTCCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: PRAYSKQKAIPSSSVSHRMAVIT*PFLLES
Trigger: TGACTCCAGGAGGAAGGGGCACGTTATCACAGCCAT...GCGATGGGACACAGATGAAGAAGGGATGGCCTTCTGTTTCGAATATGCACGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp AGGTTCTCAGCTGGCTTGGATGGGGCTATCGTTTGGTTGGCACAGACCACTGACGCATGCAGTTTAAAGTaGGTGATGCTGATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RFSAGLDGAIVWLAQTTDACSLK*VMLMAV
Trigger: CACAGCCATCAGCATCACGCACTTTAAACTGCATGC...GTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GCCCGTTCACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGCTTCTTCTCTCCTCGTaGATATTCGAAACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: ARSPSRGQPCWKNVLAHMLLLSS*IFETEG
Trigger: GCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAG...CATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGTGAACGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp CTGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATCAGGTCCACCACCTaGTTGTGTGTCGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: LAHTDSSKATANTFPHTNIRSTT*LCVAPS
Trigger: TGAGGGGGCGACACACAAGCAGGTGGTGGACCTGAT...GTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp GAGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGAGTGAGCTATGTTCATaGCACCACATTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: EGGKAVLFDPIPCRGKWLSELCS*HHIPVW
Trigger: CCAGACTGGAATGTGGTGGCATGAACATAGCTCACT...CAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp CCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGTATCCCTTCCCATCACTaGTGTTTAAGGAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: PGLIQSRRLQLRTASPVGIPSHH*CLRKSQ
Trigger: CTGTGACTTCCTTAAACAGCAGTGATGGGAAGGGAT...ACCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR GCA 90 bp GGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCATTCAAGCTGTCGCAAGACCACTGACCCACTaGAAGTTTCCCCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: GPPNPYVSCLKVSIQAVARPLTH*KFPQGL
Trigger: AAGGCCTTGGGGAAACTTGCAGTGGGTCAGTGGTCT...TGCGACAGCTTGAATGCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp CTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTCCAAGGGAACCTTTCTaGAGGGACAGGTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LGSPRKTARTHPVKTATTPREPF*RDRFLR
Trigger: CCTGAGAAACCTGTCCCTGCAGAAAGGTTCCCTTGG...AGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp ATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGGGAAAGTCTCTCTTCAGGTTCTaGTGTAGGATAGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: MAVITCPFLLESQAQWGKSLFRF*CRIANS
Trigger: GGAGTTTGCTATCCTACACCAGAACCTGAAGAGAGA...CTTTCCCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR CCA 90 bp GTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAACGTGCCCCTTCCTCCTaGAGTCACAGGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: VKQQQTPSLTQTFLVRLERAPSS*SHRHSG
Trigger: CCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACG...TTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp CAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGTGCCCCTTCCTCCTaGAGTCACAGGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: QTAVKQQQTPSLTQTFLVRAPSS*SHRHSG
Trigger: CCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACG...AACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp ATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAAGGGTCCCAGGTATTTaGCCACAGGCATATGGCGTG +
Preference number: 4 (lower is better)
Translates to: ILGSPRKTARTHPVKTATRVPGI*PQAYGV
Trigger: CACGCCATATGCCTGTGGCCAAATACCTGGGACCCT...TGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368838.2
CDS-3UTR CCA 90 bp CTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCCAGCATAACAAACCCTCAACATTCACGTaGTTCACCTCCAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: LSSLIPYHAGANGCQHNKPSTFT*FTSRMR
Trigger: CCGCATCCTGGAGGTGAACCACGTGAATGTTGAGGG...TTTGTTATGCTGGCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp TCTACCCATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCCCCTCAACATTCACGTaGTTCACCTCCAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: STHSKGPPNPYVSCLKVSPSTFT*FTSRMR
Trigger: CCGCATCCTGGAGGTGAACCACGTGAATGTTGAGGG...GCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAATGGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp CTGCTTCATGCAAAGAAGGGCTTGATCCTATGGGATCCACGCAGCCACAGGGAAACAAGGAGAGGCTGTTaGTATGAGGCCCAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: LLHAKKGLILWDPRSHRETRRGC*YEAQVK
Trigger: TTTCACCTGGGCCTCATACCAACAGCCTCTCCTTGT...TTCCCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp GAGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGTGGGTGCGTTGTTACTaGGACACTTTCAAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: EGGKAVLFDPIPCRGKWLWVRCY*DTFKRA
Trigger: AGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCA...CAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp CTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCCAGCATAACAAACCAGGAGGATCCTGCTaGTTCTGCTGGGATGAAGCT +
Preference number: 4 (lower is better)
Translates to: LSSLIPYHAGANGCQHNKPGGSC*FCWDEA
Trigger: AGCTTCATCCCAGCAGAACCAGCAGGATCCTCCTGG...TTTGTTATGCTGGCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp TTCACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATAGGCAGCAAAGAGGCCTaGCGTGATGTGCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: FTIQRPTLLEECPGSHEIGSKEA*RDVLRF
Trigger: AAACCTGAGCACATCACGCCAGGCCTCTTTGCTGCC...TATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp TCTCCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCTTCATCTGTGTCCCATCATTCACGTGGTTCTTaGCCCCGCACGTTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: SPRAYSKQKAIPSSSVSHHSRGS*PRTLKP
Trigger: CGGCTTCAACGTGCGGGGCCAAGAACCACGTGAATG...ATGGGACACAGATGAAGAAGGGATGGCCTTCTGTTTCGAATATGCACGAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR CCA 90 bp ATGCTGATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGAGGGTCCCAGGTATTTaGCCACAGGCCTATAAATTT +
Preference number: 4 (lower is better)
Translates to: MLMAVITCPFLLESQAQWRVPGI*PQAYKF
Trigger: AAATTTATAGGCCTGTGGCCAAATACCTGGGACCCT...CCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCATCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642349.1
CDS-3UTR TCA 90 bp GATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGGGAAATTTGCTGCGATAGCCTaGTATACTTGGTCTGTAGTA +
Preference number: 4 (lower is better)
Translates to: DGCDNVPLPPGVTGTVGKFAAIA*YTWSVV
Trigger: TACTACAGACCAAGTATATCAGGCTATCGCAGCAAA...TTTCCCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR TCA 90 bp ATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCCACTGCAAGTTTCCCCAAAAAGGTATGCCTGGATaGCTCAATCTGATTGGCCAC +
Preference number: 4 (lower is better)
Translates to: MGLSFGWHRPLTHCKFPQKGMPG*LNLIGH
Trigger: GTGGCCAATCAGATTGAGTCATCCAGGCATACCTTT...TTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp CCAGCACTGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACCACATCTCTCTGCTGTaGCCTCGCCATCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: PALAHTDSSKATANTFPHHISLL*PRHLEN
Trigger: ATTTTCCAGATGGCGAGGTCACAGCAGAGAGATGTG...GTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCAGTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp TTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACCTCTTTTCTCCACTTaGGCTCGCAGAACACCCTCT +
Preference number: 4 (lower is better)
Translates to: FLVRLERLPGLIQSRRLQPLFST*ARRTPS
Trigger: AGAGGGTGTTCTGCGAGCTCAAGTGGAGAAAAGAGG...TTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp ATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCCACTGCAAGTTTCCCCAAGGTATGAGGCCCAGGTaGAAGGACAAAGATACCTTT +
Preference number: 4 (lower is better)
Translates to: MGLSFGWHRPLTHCKFPQGMRPR*KDKDTF
Trigger: AAAGGTATCTTTGTCCTTTCACCTGGGCCTCATACC...TTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp TGGGAGACCCCCTCTTCCCAGGGACAAATTGCAAAAGAAGTCTGGGTAGAAGCCGTTTCCCCAAGGCCTTaGAGATACTATTGGATCCCT +
Preference number: 4 (lower is better)
Translates to: WETPSSQGQIAKEVWVEAVSPRP*RYYWIP
Trigger: AGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAAC...GGCTTCTACCCAGACTTCTTTTGCAATTTGTCCCTGGGAAGAGGGGGTCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTAATGCAAAGAAGGGCTTaGTCCTATGGGATCCACGCA +
Preference number: 4 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLMQRRA*SYGIHA
Trigger: TGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCAT...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp ATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGGGAAAGTCTGATAGGAATTCCTaGATGATGTCACTCTCACCA +
Preference number: 4 (lower is better)
Translates to: MAVITCPFLLESQAQWGKSDRNS*MMSLSP
Trigger: TGGTGAGAGTGACATCATGCAGGAATTCCTATCAGA...CTTTCCCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp TCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACGTCCATGCCAACCTTTaGTGCGATAGCCTGATATAC +
Preference number: 4 (lower is better)
Translates to: SPRKTARTHPVKTATTEDVHANL*CDSLIY
Trigger: GTATATCAGGCTATCGCAGCAAAGGTTGGCATGGAC...GTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp CTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAATGGTCAAGCAGGTaGCTGGCACAGCTGATGTAT +
Preference number: 4 (lower is better)
Translates to: LGSPRKTARTHPVKTATTEWSSR*LAQLMY
Trigger: ATACATCAGCTGTGCCAGGCACCTGCTTGACCATTC...AGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp ATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCCACTGCAAGTTTCCCCAAGCATGCAGTTTAAAGTaGGTGATGCTGATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: MGLSFGWHRPLTHCKFPQACSLK*VMLMAV
Trigger: CACAGCCATCAGCATCACGCACTTTAAACTGCATGC...TTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp TTTTCTAGATATTCTTCCAATCCCCGACGTCGGGCATCTAATTGTTGTTCTGATAGCACGGCGCTCACATaGTGCAGCGGCGCGTACAGC +
Preference number: 4 (lower is better)
Translates to: FSRYSSNPRRRASNCCSDSTALT*CSGAYS
Trigger: GCTGTACGCGCCGCTGCAGCATGTGAGCGCCGTGCT...ATCAGAACAACAATTAGATGCCCGACGTCGGGGATTGGAAGAATATCTAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642479.1
CDS-3UTR GCA 90 bp CGTGAAGATTTTAACCCATCGGGGCTTCTTCTCTCCTCGTGCATATTCGAAACAATCAGGTCCACCACCTaGTTGTGTGTCGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: REDFNPSGLLLSSCIFETIRSTT*LCVAPS
Trigger: TGAGGGGGCGACACACAAGCAGGTGGTGGACCTGAT...TGTTTCGAATATGCACGAGGAGAGAAGAAGCCCCGATGGGTTAAAATCTTCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR GCA 90 bp GAGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCACAACACTGCTTCATaGAAAGAAGGGCTTGATCCT +
Preference number: 4 (lower is better)
Translates to: EGGKAVLFDPIPCRGKWLHNTAS*KEGLDP
Trigger: AGGATCAAGCCCTTCTTTGCATGAAGCAGTGTTGTG...CAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp ACCCACTGCAAGTTTCCCCAAGGCCTTGAAGATACTATTGGATCCCTTCCCATCAGACCAGGAGGATCCTaGTGGTTCTGCTGGGATGAA +
Preference number: 4 (lower is better)
Translates to: THCKFPQGLEDTIGSLPIRPGGS*WFCWDE
Trigger: TTCATCCCAGCAGAACCAGCAGGATCCTCCTGGTCT...GATGGGAAGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp GTCATGAGAGATGGAAGAGCCTGTAGCCAATGTCCACCCTCTAGACAAGGGAAGATCTGGGGACCGATATaGGCACTGCTTGCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: VMRDGRACSQCPPSRQGKIWGPI*ALLAFL
Trigger: CAGAAAAGCAAGCAGTGCCCATATCGGTCCCCAGAT...CTTCCCTTGTCTAGAGGGTGGACATTGGCTACAGGCTCTTCCATCTCTCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp AGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCTCTCTCTTCAGGTTCTaGTGTAGGATAGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: REERLSSLIPYHAGANGCSLFRF*CRIANS
Trigger: GGAGTTTGCTATCCTACACCAGAACCTGAAGAGAGA...GCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp CCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGTTCAAATGCAATTACCTaGTTCTCCAGCTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PGLIQSRRLQLRTASPVGSNAIT*FSSCPS
Trigger: AGAAGGACAGCTGGAGAACCAGGTAATTGCATTTGA...ACCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp TTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGGACAGCTTCCCCTGTaGGTCAGGAACAACATGGAG +
Preference number: 4 (lower is better)
Translates to: FPHTNILGSPRKTARTHPGQLPL*VRNNME
Trigger: CTCCATGTTGTTCCTGACCCACAGGGGAAGCTGTCC...TGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp GCCCGTTCACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGTCCCCAGCACCCTCTTaGAAGATAAAGAAACTATAC +
Preference number: 4 (lower is better)
Translates to: ARSPSRGQPCWKNVLAHMSPAPS*KIKKLY
Trigger: GTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGA...CATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGTGAACGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp TTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAAGATGGGGCTATCGTTTaGTTGGCACAGACCACTGAC +
Preference number: 4 (lower is better)
Translates to: FLVRLERLPGLIQSRRLQDGAIV*LAQTTD
Trigger: GTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATC...TTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp ACCTCTTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGTCCTGCTGGTTCTGCTaGGATGAAGCTGGGGGCACT +
Preference number: 4 (lower is better)
Translates to: TSFSSPAPSWKIKKLYSLSCWFC*DEAGGT
Trigger: AGTGCCCCCAGCTTCATCCCAGCAGAACCAGCAGGA...CAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAAGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp TCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTGCTGCTCCAAGTGCTaGGTTTGGAGCTACAGGAAG +
Preference number: 4 (lower is better)
Translates to: SLTQTFLVRLERLPGLIQCCSKC*VWSYRK
Trigger: CTTCCTGTAGCTCCAAACCCAGCACTTGGAGCAGCA...CTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp AGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCACAGCAGTCCCTCCTaGTCTGGAAAATTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RKTARTHPVKTATTEDSFHSSPS*SGKFRS
Trigger: TGACCTGAATTTTCCAGACCAGGAGGGACTGCTGTG...GAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp CCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGTTGTGTAATCATAAAATaGTTGTCCCAACGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: PGLIQSRRLQLRTASPVGCVIIK*LSQRVV
Trigger: GACGACTCGTTGGGACAATCATTTTATGATTACACA...ACCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp GATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGGGAAAATAGGAATTCCTGCATaGTGTCACTCTCACCAATTA +
Preference number: 4 (lower is better)
Translates to: DGCDNVPLPPGVTGTVGKIGIPA*CHSHQL
Trigger: TAATTGGTGAGAGTGACATCATGCAGGAATTCCTAT...TTTCCCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR TCA 90 bp AGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGTCAATGTCCTGGCTCACATaGGATAATCAGTCTCTAACT +
Preference number: 4 (lower is better)
Translates to: RTHPVKTATTEDSFPCGSMSWLT*DNQSLT
Trigger: AGTTAGAGACTGATTATCTCATGTGAGCCAGGACAT...TGACCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp TCTCCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCTTCATCTGTGTCCCATGCAGAGGAGGGTCCATaGAGTCATGAGAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: SPRAYSKQKAIPSSSVSHAEEGP*SHERWK
Trigger: CTTCCATCTCTCATGACTTCATGGACCCTCCTCTGC...ATGGGACACAGATGAAGAAGGGATGGCCTTCTGTTTCGAATATGCACGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR TCA 90 bp GTCATGAGAGATGGAAGAGCCTGTAGCCAATGTCCACCCTCTAGACAAGGGAAGAAAGGTATGCCTGGATaGCTCAATCTGATTGGCCAC +
Preference number: 4 (lower is better)
Translates to: VMRDGRACSQCPPSRQGKKGMPG*LNLIGH
Trigger: GTGGCCAATCAGATTGAGTCATCCAGGCATACCTTT...CTTCCCTTGTCTAGAGGGTGGACATTGGCTACAGGCTCTTCCATCTCTCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp ATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACACACATCTCTCTGCTGTaGCCTCGCCATCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: ILGSPRKTARTHPVKTATHISLL*PRHLEN
Trigger: ATTTTCCAGATGGCGAGGTCACAGCAGAGAGATGTG...TGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp ATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCCACTGCAAGTTTCCCCAAAGGTTATCTGCCTCATaGGGAGGTACAGATAACACT +
Preference number: 4 (lower is better)
Translates to: MGLSFGWHRPLTHCKFPQRLSAS*GGTDNT
Trigger: AGTGTTATCTGTACCTCCTCATGAGGCAGATAACCT...TTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp ACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATAATCGTTGACTTCTGGTGCTaGCCGATCTGCTGTTCACTA +
Preference number: 4 (lower is better)
Translates to: TIQRPTLLEECPGSHEIIVDFWC*PICCSL
Trigger: TAGTGAACAGCAGATCGGTCAGCACCAGAAGTCAAC...GATTATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp AGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCTCTATGGCAACCCATaGGCCGGAATCTATACTCAA +
Preference number: 4 (lower is better)
Translates to: RKTARTHPVKTATTEDSFLYGNP*AGIYTQ
Trigger: TTGAGTATAGATTCCGGCTCATGGGTTGCCATAGAG...GAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp CTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCCAGCATAACAAAGGTGGGCAGATTACTTaGGGTCAGGAGTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: LSSLIPYHAGANGCQHNKGGQIT*GQEFKT
Trigger: GGTTTTGAACTCCTGACCTCAAGTAATCTGCCCACC...TTTGTTATGCTGGCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp CCAGCACTGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACCCTATGTCTCATGTCTaGAGGTCAGCATTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: PALAHTDSSKATANTFPHPMSHV*RSAFKL
Trigger: CAGCTTGAATGCTGACCTTCAGACATGAGACATAGG...GTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCAGTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp TCTACCCATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCATGCAAAGAAGGGCTTaGTCCTATGGGATCCACGCA +
Preference number: 4 (lower is better)
Translates to: STHSKGPPNPYVSCLKVSMQRRA*SYGIHA
Trigger: TGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCAT...GCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAATGGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp ACCCACTGCAAGTTTCCCCAAGGCCTTGAAGATACTATTGGATCCCTTCCCATCGGCCATAAAAAGCTCTaGGCTTCTACCCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: THCKFPQGLEDTIGSLPIGHKKL*ASTPED
Trigger: ATCCTCAGGGGTAGAAGCTCAGAGCTTTTTATGGCC...GATGGGAAGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp TTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAATCTAGCCAAACAGTATaGTGGCGAGAAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: FLVRLERLPGLIQSRRLQSSQTV*WREGRA
Trigger: TGCTCTCCCTTCTCGCCATCATACTGTTTGGCTAGA...TTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR GCA 90 bp CTGCTTCATGCAAAGAAGGGCTTGATCCTATGGGATCCACGCAGCCACAGGGAAGACCGATATGGGCACTaGTTGCTTTTCTGTGTAATC +
Preference number: 4 (lower is better)
Translates to: LLHAKKGLILWDPRSHREDRYGH*LLFCVI
Trigger: GATTACACAGAAAAGCAAGCAGTGCCCATATCGGTC...TTCCCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATGAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp TTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAAGAATGGTCAAGCAGGTaGCTGGCACAGCTGATGTAT +
Preference number: 4 (lower is better)
Translates to: FLVRLERLPGLIQSRRLQEWSSR*LAQLMY
Trigger: ATACATCAGCTGTGCCAGGCACCTGCTTGACCATTC...TTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp CTGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATGGCTGTGATAACGTaGCCCTTCCTCCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LAHTDSSKATANTFPHTNMAVIT*PFLLES
Trigger: TGACTCCAGGAGGAAGGGGCACGTTATCACAGCCAT...GTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp CTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGCATGCAGTTTAAAGTaGGTGATGCTGATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LGSPRKTARTHPVKTATTACSLK*VMLMAV
Trigger: CACAGCCATCAGCATCACGCACTTTAAACTGCATGC...AGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp TCGGGGCTTCTTCTCTCCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCTTCGCATGCAGTTTAAAGTaGGTGATGCTGATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SGLLLSSCIFETEGHPFFACSLK*VMLMAV
Trigger: CACAGCCATCAGCATCACGCACTTTAAACTGCATGC...GAAGAAGGGATGGCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAGCCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp TCTCCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCTTCATCTGTGTCCCATTCCAGAGGCCAACCTTaGTGGAAGAATGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SPRAYSKQKAIPSSSVSHSRGQP*WKNVLA
Trigger: AGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGA...ATGGGACACAGATGAAGAAGGGATGGCCTTCTGTTTCGAATATGCACGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR GCA 90 bp CAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTGTGGCCACATCTCTCTaGTGTGACCTCGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: QTAVKQQQTPSLTQTFLVVATSL*CDLAIW
Trigger: CCAGATGGCGAGGTCACAGCAGAGAGATGTGGCCAC...AACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp AGGAGTGGGAAATCAACATGTCTTCTTTTCAGGGTCCTTTGGCTCATTTTAAATAGCACGGCGCTCACATaGTGCAGCGGCGCGTACAGC +
Preference number: 4 (lower is better)
Translates to: RSGKSTCLLFRVLWLILNSTALT*CSGAYS
Trigger: GCTGTACGCGCCGCTGCAGCATGTGAGCGCCGTGCT...ATTTAAAATGAGCCAAAGGACCCTGAAAAGAAGACATGTTGATTTCCCACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCGGAAGTCACAGAGAATaGCGTAGTTATGGGTGGTTA +
Preference number: 4 (lower is better)
Translates to: GNIVLPQLALASDPGMQLGSHRE*RSYGWL
Trigger: TAACCACCCATAACTACGGCATTCTCTGTGACTTCC...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp CTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCCAGCATAACAAATTTGATCCCATACCATaGAGGGGCAAATGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LSSLIPYHAGANGCQHNKFDPIP*RGKWLP
Trigger: TGGCAGCCATTTGCCCCTGCATGGTATGGGATCAAA...TTTGTTATGCTGGCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp TCTACCCATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCGTCAGTGCCCTATTTTaGTGCTCCAAGTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: STHSKGPPNPYVSCLKVSVSALF*CSKCWV
Trigger: AACCCAGCACTTGGAGCAGCAAAATAGGGCACTGAC...GCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAATGGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp CTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCCAGCATAACAAACCAACGAGTCGTCACTaGGATCTAGGTTATCTGCCT +
Preference number: 4 (lower is better)
Translates to: LSSLIPYHAGANGCQHNKPTSRH*DLGYLP
Trigger: AGGCAGATAACCTAGATCCCAGTGACGACTCGTTGG...TTTGTTATGCTGGCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp ACCCACTGCAAGTTTCCCCAAGGCCTTGAAGATACTATTGGATCCCTTCCCATCATCTGGGGACCGATATaGGCACTGCTTGCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: THCKFPQGLEDTIGSLPIIWGPI*ALLAFL
Trigger: CAGAAAAGCAAGCAGTGCCCATATCGGTCCCCAGAT...GATGGGAAGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp TCTACCCATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCCCACATGTTTGTATCTaGGGACCGATATGGGCACTG +
Preference number: 4 (lower is better)
Translates to: STHSKGPPNPYVSCLKVSPHVCI*GPIWAL
Trigger: CAGTGCCCATATCGGTCCCCAGATACAAACATGTGG...GCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAATGGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCTCTCTCTTCAGGTTCTaGTGTAGGATAGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: GNIVLPQLALASDPGMQLSLFRF*CRIANS
Trigger: GGAGTTTGCTATCCTACACCAGAACCTGAAGAGAGA...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp TTCACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATAAAAGCCACTTTCGAATaGTCAAGCAGGTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: FTIQRPTLLEECPGSHEIKATFE*SSRCLA
Trigger: TGCCAGGCACCTGCTTGACCATTCGAAAGTGGCTTT...TATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp CGTTCAGTCTCCTTTCAATTAAAACTTGGGAGATCCAATCTAATCAACCATATTCGGCCACCGAGCTGCTaGCGCGGGGTGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RSVSFQLKLGRSNLINHIRPPSC*RGVKRR
Trigger: CCTCCTCTTCACCCCGCGCCAGCAGCTCGGTGGCCG...AATATGGTTGATTAGATTGGATCTCCCAAGTTTTAATTGAAAGGAGACTGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCTGCCGTAGTTATGGGTaGTTATTGGTCAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: GNIVLPQLALASDPGMQLCRSYG*LLVRNG
Trigger: TCCATTCCTGACCAATAACCACCCATAACTACGGCA...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp AGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCGGGCTATCGTTTGGTTaGCACAGACCACTGACCCAC +
Preference number: 4 (lower is better)
Translates to: SLLEPEGTLDINYVVQSSGLSFG*HRPLTH
Trigger: GTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCC...GGAAGACTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp GCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTCTCAGCTGGCTTGGATaGGGCTATCGTTTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: ATANTFPHTNILGSPRKTLSWLG*GYRLVG
Trigger: GCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAG...AGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp GTCATGAGAGATGGAAGAGCCTGTAGCCAATGTCCACCCTCTAGACAAGGGAAGGATAGAAACCAAGTGTaGAGGAAGGCCAGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: VMRDGRACSQCPPSRQGKDRNQV*RKASER
Trigger: TCTCTCACTGGCCTTCCTCCACACTTGGTTTCTATC...CTTCCCTTGTCTAGAGGGTGGACATTGGCTACAGGCTCTTCCATCTCTCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTAGATAGAAACCAAGTGTaGAGGAAGGCCAGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLDRNQV*RKASER
Trigger: TCTCTCACTGGCCTTCCTCCACACTTGGTTTCTATC...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp GAGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGGTCTACATTTTCTCCTaGGCCATAAAAAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: EGGKAVLFDPIPCRGKWLVYIFS*AIKSSE
Trigger: CTCAGAGCTTTTTATGGCCCAGGAGAAAATGTAGAC...CAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CAA 72 bp TTTTTGCACAGCCCGTTCACCATCCAGAGGCCAACCTaGCTGGAAGAATGTCCTGGCTCACATGAGATAATC +
Preference number: 4 (lower is better)
Translates to: FLHSPFTIQRPT*LEECPGSHEII
Trigger: GATTATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGTGAACGGGCTGTGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp CACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTGTGTAATCATAAAATaGTTGTCCCAACGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: HLLAAAGCVVTGTLSKGLCVIIK*LSQRVV
Trigger: GACGACTCGTTGGGACAATCATTTTATGATTACACA...CAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp ATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCCACTGCAAGTTTCCCCAATTTGCTGCGATAGCCTaGTATACTTGGTCTGTAGTA +
Preference number: 4 (lower is better)
Translates to: MGLSFGWHRPLTHCKFPQFAAIA*YTWSVV
Trigger: TACTACAGACCAAGTATATCAGGCTATCGCAGCAAA...TTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp TCGGGGCTTCTTCTCTCCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCTTCGGTGCCTGGCACAGCTaGTGTATAATTCTGAATGTA +
Preference number: 4 (lower is better)
Translates to: SGLLLSSCIFETEGHPFFGAWHS*CIILNV
Trigger: TACATTCAGAATTATACATCAGCTGTGCCAGGCACC...GAAGAAGGGATGGCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAGCCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR TCA 90 bp TCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCCTGGATCAAGACGGCTACAACTaGGGACAGCTTCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SSYLETTPQTEAKKVCLDQDGYN*GQLPLW
Trigger: CCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTG...ATCCAGGCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp GGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCATTCAAGCTGTCGCAAGGTTATCTGCCTCATaGGGAGGTACAGATAACACT +
Preference number: 4 (lower is better)
Translates to: GPPNPYVSCLKVSIQAVARLSAS*GGTDNT
Trigger: AGTGTTATCTGTACCTCCTCATGAGGCAGATAACCT...TGCGACAGCTTGAATGCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp AAGAAAGAGAGCACGAGGGAGGTCATGGATTCTAGTGAAAGGTGTGTAAAAACAGTTGGCACAGACCACTaGCCCACTGCAAGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: KKESTREVMDSSERCVKTVGTDH*PTASFP
Trigger: GGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAAC...TGTTTTTACACACCTTTCACTAGAATCCATGACCTCCCTCGTGCTCTCTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp AGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCGCTATTTTTACAGTTTaGACAAAGCTGGTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: REERLSSLIPYHAGANGCAIFTV*TKLVPS
Trigger: ACTTGGCACCAGCTTTGTTCAAACTGTAAAAATAGC...GCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp CACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGGCTATTTTTACAGTTTaGACAAAGCTGGTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: HLLAAAGCVVTGTLSKGLAIFTV*TKLVPS
Trigger: ACTTGGCACCAGCTTTGTTCAAACTGTAAAAATAGC...CAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp TCTACCCATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCCCTATGTCTCATGTCTaGAGGTCAGCATTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: STHSKGPPNPYVSCLKVSPMSHV*RSAFKL
Trigger: CAGCTTGAATGCTGACCTTCAGACATGAGACATAGG...GCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAATGGGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp ACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTAACAGCTTCTACTGCTaGATGAATCTAGCCAAACAG +
Preference number: 4 (lower is better)
Translates to: TSLLQLGALLLGHFQKGCNSFYC*MNLAKQ
Trigger: CTGTTTGGCTAGATTCATTCAGCAGTAGAAGCTGTT...ACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCTCTGATAGGAATTCCTaGATGATGTCACTCTCACCA +
Preference number: 4 (lower is better)
Translates to: GNIVLPQLALASDPGMQLSDRNS*MMSLSP
Trigger: TGGTGAGAGTGACATCATGCAGGAATTCCTATCAGA...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp AGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCATGCCAACCTTTGCTaGGATAGCCTGATATACTTG +
Preference number: 4 (lower is better)
Translates to: RKTARTHPVKTATTEDSFHANLC*DSLIYL
Trigger: CAAGTATATCAGGCTATCGCAGCAAAGGTTGGCATG...GAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp TCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACCTTCACATCATCGACTaGCTGATGAAAGAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SPRKTARTHPVKTATTEDLHIID*LMKEVG
Trigger: ACCTACTTCTTTCATCAGGCAGTCGATGATGTGAAG...GTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp ACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTCTTCACATCATCGACTaGCTGATGAAAGAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: TSLLQLGALLLGHFQKGCLHIID*LMKEVG
Trigger: ACCTACTTCTTTCATCAGGCAGTCGATGATGTGAAG...ACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp ACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATAATCGCATGCAGTTTAAAGTaGGTGATGCTGATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TIQRPTLLEECPGSHEIIACSLK*VMLMAV
Trigger: CACAGCCATCAGCATCACGCACTTTAAACTGCATGC...GATTATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTATCTGTGTCCCATCGCTaGATCTCATCCCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLSVSHR*ISSHSN
Trigger: ATTTGAATGGGATGAGATGCAGCGATGGGACACAGA...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp TTTCTCAGGGTCTACATTTTCTCCTGGGCCATAAAAAGCTCTGAGCTTCTACCCTCCAGAGGCCAACCTTaGTGGAAGAATGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: FLRVYIFSWAIKSSELLPSRGQP*WKNVLA
Trigger: AGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGA...GGGTAGAAGCTCAGAGCTTTTTATGGCCCAGGAGAAAATGTAGACCCTGAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR GCA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCAAAGCACCAAGTGAATaGTATGCCAGAAAGGGAACA +
Preference number: 4 (lower is better)
Translates to: GNIVLPQLALASDPGMQLKAPSE*YARKGT
Trigger: TGTTCCCTTTCTGGCATAGCATTCACTTGGTGCTTT...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCATTCAAGCTGTCGCAGAAGAGTCACAACACTaGTTCATGCAAAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GPPNPYVSCLKVSIQAVAEESQH*FMQRRA
Trigger: AGCCCTTCTTTGCATGAAGCAGTGTTGTGACTCTTC...TGCGACAGCTTGAATGCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCATTCAAGCTGTCGCATTCATCTCCTGTCAGTaGCCTATTTTGCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: GPPNPYVSCLKVSIQAVAFISCQ*PILLLQ
Trigger: TTGGAGCAGCAAAATAGGGCACTGACAGGAGATGAA...TGCGACAGCTTGAATGCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp AGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCTTGGCCACAGGCATATaGCGTGAAGATTTTAACCCA +
Preference number: 4 (lower is better)
Translates to: RKTARTHPVKTATTEDSFLATGI*REDFNP
Trigger: TGGGTTAAAATCTTCACGCCATATGCCTGTGGCCAA...GAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368838.2
CDS-3UTR CCA 90 bp CTACTCTCAGCTCTACGTCGGACACACCATTGTAGTTCTCATCGGATTCTGATAAGAGGCCAACCTTGCTaGAAGAATGTCCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LLSALRRTHHCSSHRILIRGQPC*KNVLAH
Trigger: GTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCT...TATCAGAATCCGATGAGAACTACAATGGTGTGTCCGACGTAGAGCTGAGAGTAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR CCA 90 bp CAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTGGACAGCTTCCCCTGTaGGTCAGGAACAACATGGAG +
Preference number: 4 (lower is better)
Translates to: QTAVKQQQTPSLTQTFLVGQLPL*VRNNME
Trigger: CTCCATGTTGTTCCTGACCCACAGGGGAAGCTGTCC...AACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp GTCATGAGAGATGGAAGAGCCTGTAGCCAATGTCCACCCTCTAGACAAGGGAAGATTCTGTTCCAGCACTaGCACATACAGACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: VMRDGRACSQCPPSRQGKILFQH*HIQTAV
Trigger: TACTGCTGTCTGTATGTGCCAGTGCTGGAACAGAAT...CTTCCCTTGTCTAGAGGGTGGACATTGGCTACAGGCTCTTCCATCTCTCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp ATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCCACTGCAAGTTTCCCCAAGGACAAAGATACCTTTaGCAAGTTGGTTGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: MGLSFGWHRPLTHCKFPQGQRYL*QVGWAY
Trigger: ATAAGCCCAACCAACTTGCCAAAGGTATCTTTGTCC...TTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp ACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCACAAGGAGAGGCTGTTaGTATGAGGCCCAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: TANTFPHTNILGSPRKTATRRGC*YEAQVK
Trigger: TTTCACCTGGGCCTCATACCAACAGCCTCTCCTTGT...GGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp AGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCGTTATGGGTGGTTATTaGTCAGGAATGGAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: RKTARTHPVKTATTEDSFVMGGY*SGMEEV
Trigger: TACCTCCTCCATTCCTGACCAATAACCACCCATAAC...GAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp AGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCAAGGGGAAAGAAAAGTaGCCTCACAATGATTTGCAA +
Preference number: 4 (lower is better)
Translates to: REERLSSLIPYHAGANGCKGKEK*PHNDLQ
Trigger: TTGCAAATCATTGTGAGGCCACTTTTCTTTCCCCTT...GCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp TCTACCCATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCATTCAAGCTGTCGCATaGAATCCCAGCTCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: STHSKGPPNPYVSCLKVSIQAVA*NPSSVH
Trigger: GTGAACAGAGCTGGGATTCCATGCGACAGCTTGAAT...GCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAATGGGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp ACCCACTGCAAGTTTCCCCAAGGCCTTGAAGATACTATTGGATCCCTTCCCATCTGGGTGCGTTGTTACTaGGACACTTTCAAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: THCKFPQGLEDTIGSLPIWVRCY*DTFKRA
Trigger: AGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCA...GATGGGAAGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp CACATCTCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCACCCAAGGCCGTGCATaGGTGGAAGAGAAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: HISSYLETTPQTEAKKVCTQGRA*VEEKKA
Trigger: CGCCTTCTTCTCTTCCACCCATGCACGGCCTTGGGT...GCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp ACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTAAGGATGAAACTAAATaGGCCAGGCATGAGGATGTT +
Preference number: 4 (lower is better)
Translates to: TSLLQLGALLLGHFQKGCKDETK*ARHEDV
Trigger: AACATCCTCATGCCTGGCCCATTTAGTTTCATCCTT...ACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp ACCTCTTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGTGCTGCTCCAAGTGCTaGGTTTGGAGCTACAGGAAG +
Preference number: 4 (lower is better)
Translates to: TSFSSPAPSWKIKKLYSLCCSKC*VWSYRK
Trigger: CTTCCTGTAGCTCCAAACCCAGCACTTGGAGCAGCA...CAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp AGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCCCCTGTGGGTCATTACGTACAAAGGAGTaGCTGATCACTTCAAATAAG +
Preference number: 4 (lower is better)
Translates to: RTHPVKTATTEDSFPCGSLRTKE*LITSNK
Trigger: CTTATTTGAAGTGATCAGTCACTCCTTTGTACGTAA...TGACCCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp CACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTACGTACAAAGGAGTaGCTGATCACTTCAAATAAG +
Preference number: 4 (lower is better)
Translates to: HLLAAAGCVVTGTLSKGLLRTKE*LITSNK
Trigger: CTTATTTGAAGTGATCAGTCACTCCTTTGTACGTAA...CAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp GTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAGCAGAGGAGGGTCCATaGAGTCATGAGAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: VKQQQTPSLTQTFLVRLEAEEGP*SHERWK
Trigger: CTTCCATCTCTCATGACTTCATGGACCCTCCTCTGC...TTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp TTTGTATCTGGGGACCGATATGGGCACTGCTTGCTTTTCTGTGTAATCATAAAACAAGACGGCTACAACTaGGGACAGCTTCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FVSGDRYGHCLLFCVIIKQDGYN*GQLPLW
Trigger: CCACAGGGGAAGCTGTCCTCAGTTGTAGCCGTCTTG...TTTTATGATTACACAGAAAAGCAAGCAGTGCCCATATCGGTCCCCAGATACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR TCA 90 bp GCACTGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACACACAGAAGAGAAAACTaGAAGCTAGGGAGGCTGATT +
Preference number: 4 (lower is better)
Translates to: ALAHTDSSKATANTFPHTHRREN*KLGRLI
Trigger: AATCAGCCTCCCTAGCTTTCAGTTTTCTCTTCTGTG...TGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp TGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACACACATCTCTCTGCTGTaGCCTCGCCATCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: WHIQTAVKQQQTPSLTQTHISLL*PRHLEN
Trigger: ATTTTCCAGATGGCGAGGTCACAGCAGAGAGATGTG...TGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp ACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCGTTTCCCCAAGGCCTTaGAGATACTATTGGATCCCT +
Preference number: 4 (lower is better)
Translates to: TANTFPHTNILGSPRKTAVSPRP*RYYWIP
Trigger: AGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAAC...GGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp ACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTGAAGTTGGCAAATTCTaGGATAGGAGAGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: TSLLQLGALLLGHFQKGCEVGKF*DRREFH
Trigger: ATGAAACTCTCTCCTATCTCAGAATTTGCCAACTTC...ACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp GCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTCTCCCTCCCTCTCTCTaGGTGTTCTATCACATCATC +
Preference number: 4 (lower is better)
Translates to: ATANTFPHTNILGSPRKTLPPSL*VFYHII
Trigger: GATGATGTGATAGAACACTCAGAGAGAGGGAGGGAG...AGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR GCA 90 bp AGTTTAAAGTGCGTGATGCTGATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCTGATAGGAATTCCTaGATGATGTCACTCTCACCA +
Preference number: 4 (lower is better)
Translates to: SLKCVMLMAVITCPFLLESDRNS*MMSLSP
Trigger: TGGTGAGAGTGACATCATGCAGGAATTCCTATCAGA...CTCCAGGAGGAAGGGGCACGTTATCACAGCCATCAGCATCACGCACTTTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp TTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACATGCCAACCTTTGCTaGGATAGCCTGATATACTTG +
Preference number: 4 (lower is better)
Translates to: FLVRLERLPGLIQSRRLQHANLC*DSLIYL
Trigger: CAAGTATATCAGGCTATCGCAGCAAAGGTTGGCATG...TTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp ATTTCTTCTTCTGTTGTAAAAAGCCACTTTCGAATGGTCAAGCAGGTGCCTGGCATGGCTGTGATAACGTaGCCCTTCCTCCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: ISSSVVKSHFRMVKQVPGMAVIT*PFLLES
Trigger: TGACTCCAGGAGGAAGGGGCACGTTATCACAGCCAT...GCCAGGCACCTGCTTGACCATTCGAAAGTGGCTTTTTACAACAGAAGAAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTACTCATCCCATTCAAATaGAATTACCTGGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLLIPFK*NYLVLQ
Trigger: CTGGAGAACCAGGTAATTGCATTTGAATGGGATGAG...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp TTCACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATATCTGTGTCCCATCGCTaGATCTCATCCCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: FTIQRPTLLEECPGSHEISVSHR*ISSHSN
Trigger: ATTTGAATGGGATGAGATGCAGCGATGGGACACAGA...TATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp CACTGTCGTACTGTCCATGCCAACCTTTGCTGCGATAGCCTGATATACTTGGTCTCTGTGTCCCATCGCTaGATCTCATCCCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: HCRTVHANLCCDSLIYLVSVSHR*ISSHSN
Trigger: ATTTGAATGGGATGAGATGCAGCGATGGGACACAGA...GACCAAGTATATCAGGCTATCGCAGCAAAGGTTGGCATGGACAGTACGACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp GGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCTGTTTCACAGAAGAGAAAGTGGCCACATCTCTCTaGTGTGACCTCGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: GTLDINYVVQSSCFTEEKVATSL*CDLAIW
Trigger: CCAGATGGCGAGGTCACAGCAGAGAGATGTGGCCAC...TTTCTCTTCTGTGAAACAGGAAGACTGAACCACGTAATTAATATCCAAGGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp CGTTCAGTCTCCTTTCAATTAAAACTTGGGAGATCCAATCTAATCAACCATATTCCTCGTCCGCCATCTTaGGAGCAGGCGAGCCGTACC +
Preference number: 4 (lower is better)
Translates to: RSVSFQLKLGRSNLINHIPRPPS*EQASRT
Trigger: GGTACGGCTCGCCTGCTCGCAAGATGGCGGACGAGG...AATATGGTTGATTAGATTGGATCTCCCAAGTTTTAATTGAAAGGAGACTGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp ACCCACTGCAAGTTTCCCCAAGGCCTTGAAGATACTATTGGATCCCTTCCCATCGGAAGTCACAGAGAATaGCGTAGTTATGGGTGGTTA +
Preference number: 4 (lower is better)
Translates to: THCKFPQGLEDTIGSLPIGSHRE*RSYGWL
Trigger: TAACCACCCATAACTACGGCATTCTCTGTGACTTCC...GATGGGAAGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTACTGAGCCTGACTTGGTaGTTCTTATGCATTATCTAC +
Preference number: 4 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLLSLTW*FLCIIY
Trigger: GTAGATAATGCATAAGAAGCACCAAGTCAGGCTCAG...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCATTCAAGCTGTCGCACAACCACCCCAACACTaGTTAGTAGAATTGACTACA +
Preference number: 4 (lower is better)
Translates to: GPPNPYVSCLKVSIQAVAQPPQH*LVELTT
Trigger: TGTAGTCAATTCTACTAAGCAGTGTTGGGGTGGTTG...TGCGACAGCTTGAATGCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GGATCCCTCTGCAACTTTACACATTCAGCATTCTCACGTTTTGTACTCTGTGATTCCAGGCCTAGGAGCTaGCCTGAGCATGCACATATC +
Preference number: 4 (lower is better)
Translates to: GSLCNFTHSAFSRFVLCDSRPRS*PEHAHI
Trigger: GATATGTGCATGCTCAGGGCAGCTCCTAGGCCTGGA...ATCACAGAGTACAAAACGTGAGAATGCTGAATGTGTAAAGTTGCAGAGGGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTAGAAGAAACAGCAGTATaGTGGGGTCAACAGATCAAA +
Preference number: 4 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLEETAV*WGQQIK
Trigger: TTTGATCTGTTGACCCCAGCATACTGCTGTTTCTTC...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp TTTCTCAGGGTCTACATTTTCTCCTGGGCCATAAAAAGCTCTGAGCTTCTACCCCCAACGAGTCGTCACTaGGATCTAGGTTATCTGCCT +
Preference number: 4 (lower is better)
Translates to: FLRVYIFSWAIKSSELLPPTSRH*DLGYLP
Trigger: AGGCAGATAACCTAGATCCCAGTGACGACTCGTTGG...GGGTAGAAGCTCAGAGCTTTTTATGGCCCAGGAGAAAATGTAGACCCTGAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp TGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACAATCTGGGGACCGATATaGGCACTGCTTGCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: WHIQTAVKQQQTPSLTQTIWGPI*ALLAFL
Trigger: CAGAAAAGCAAGCAGTGCCCATATCGGTCCCCAGAT...TGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp AGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCCCACATGTTTGTATCTaGGGACCGATATGGGCACTG +
Preference number: 4 (lower is better)
Translates to: SLLEPEGTLDINYVVQSSPHVCI*GPIWAL
Trigger: CAGTGCCCATATCGGTCCCCAGATACAAACATGTGG...GGAAGACTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp AGTTTAAAGTGCGTGATGCTGATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCAAATGCAATTACCTaGTTCTCCAGCTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SLKCVMLMAVITCPFLLESNAIT*FSSCPS
Trigger: AGAAGGACAGCTGGAGAACCAGGTAATTGCATTTGA...CTCCAGGAGGAAGGGGCACGTTATCACAGCCATCAGCATCACGCACTTTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR CCA 90 bp CAGAAGCTAAAAAGGTATGCCTGGATGACTCAATCTGATTGGCCACATCTTTCTGGACAGCTTCCCCTGTaGGTCAGGAACAACATGGAG +
Preference number: 4 (lower is better)
Translates to: QKLKRYAWMTQSDWPHLSGQLPL*VRNNME
Trigger: CTCCATGTTGTTCCTGACCCACAGGGGAAGCTGTCC...AGAAAGATGTGGCCAATCAGATTGAGTCATCCAGGCATACCTTTTTAGCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp TCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGATTCTGTTCCAGCACTaGCACATACAGACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: SLTQTFLVRLERLPGLIQILFQH*HIQTAV
Trigger: TACTGCTGTCTGTATGTGCCAGTGCTGGAACAGAAT...CTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp GTCATGAGAGATGGAAGAGCCTGTAGCCAATGTCCACCCTCTAGACAAGGGAAGGGACAAAGATACCTTTaGCAAGTTGGTTGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: VMRDGRACSQCPPSRQGKGQRYL*QVGWAY
Trigger: ATAAGCCCAACCAACTTGCCAAAGGTATCTTTGTCC...CTTCCCTTGTCTAGAGGGTGGACATTGGCTACAGGCTCTTCCATCTCTCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp TGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACAGCACGAGGGAGGTCATaGATTCTAGTGAAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: WHIQTAVKQQQTPSLTQTARGRS*ILVKGV
Trigger: CACACCTTTCACTAGAATCCATGACCTCCCTCGTGC...TGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp ATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACATGCCGTAGTTATGGGTaGTTATTGGTCAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: ILGSPRKTARTHPVKTATCRSYG*LLVRNG
Trigger: TCCATTCCTGACCAATAACCACCCATAACTACGGCA...TGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp TCCCACTCTGAGCGAGTAGGGGCAAATTGCTATTTTTACAGTTTGAACAAAGCTGGGCTATCGTTTGGTTaGCACAGACCACTGACCCAC +
Preference number: 4 (lower is better)
Translates to: SHSERVGANCYFYSLNKAGLSFG*HRPLTH
Trigger: GTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCC...AGCTTTGTTCAAACTGTAAAAATAGCAATTTGCCCCTACTCGCTCAGAGTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp TCCCACTCTGAGCGAGTAGGGGCAAATTGCTATTTTTACAGTTTGAACAAAGCTCTCAGCTGGCTTGGATaGGGCTATCGTTTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: SHSERVGANCYFYSLNKALSWLG*GYRLVG
Trigger: GCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAG...AGCTTTGTTCAAACTGTAAAAATAGCAATTTGCCCCTACTCGCTCAGAGTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp ACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCATTCAAGCTGTCGCATaGAATCCCAGCTCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: TANTFPHTNILGSPRKTAIQAVA*NPSSVH
Trigger: GTGAACAGAGCTGGGATTCCATGCGACAGCTTGAAT...GGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp TCCCACTCTGAGCGAGTAGGGGCAAATTGCTATTTTTACAGTTTGAACAAAGCTAAGGGCTTGATCCTATaGGATCCACGCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: SHSERVGANCYFYSLNKAKGLIL*DPRSHR
Trigger: CCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTT...AGCTTTGTTCAAACTGTAAAAATAGCAATTTGCCCCTACTCGCTCAGAGTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp AAGAAAGAGAGCACGAGGGAGGTCATGGATTCTAGTGAAAGGTGTGTAAAAACACCAGGAGGATCCTGCTaGTTCTGCTGGGATGAAGCT +
Preference number: 4 (lower is better)
Translates to: KKESTREVMDSSERCVKTPGGSC*FCWDEA
Trigger: AGCTTCATCCCAGCAGAACCAGCAGGATCCTCCTGG...TGTTTTTACACACCTTTCACTAGAATCCATGACCTCCCTCGTGCTCTCTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp AGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACAGCTTCTGTGTAATCATAAAATaGTTGTCCCAACGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: RKTARTHPVKTATTEDSFCVIIK*LSQRVV
Trigger: GACGACTCGTTGGGACAATCATTTTATGATTACACA...GAAGCTGTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp TTCACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATATTTGCTGCGATAGCCTaGTATACTTGGTCTGTAGTA +
Preference number: 4 (lower is better)
Translates to: FTIQRPTLLEECPGSHEIFAAIA*YTWSVV
Trigger: TACTACAGACCAAGTATATCAGGCTATCGCAGCAAA...TATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp ACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATAATCTTTGCTGCGATAGCCTaGTATACTTGGTCTGTAGTA +
Preference number: 4 (lower is better)
Translates to: TIQRPTLLEECPGSHEIIFAAIA*YTWSVV
Trigger: TACTACAGACCAAGTATATCAGGCTATCGCAGCAAA...GATTATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp ACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCGGTGCCTGGCACAGCTaGTGTATAATTCTGAATGTA +
Preference number: 4 (lower is better)
Translates to: TANTFPHTNILGSPRKTAGAWHS*CIILNV
Trigger: TACATTCAGAATTATACATCAGCTGTGCCAGGCACC...GGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp TTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGGTGCCTGGCACAGCTaGTGTATAATTCTGAATGTA +
Preference number: 4 (lower is better)
Translates to: FPHTNILGSPRKTARTHPGAWHS*CIILNV
Trigger: TACATTCAGAATTATACATCAGCTGTGCCAGGCACC...TGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp TCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCCTGGATGCAGAGGAGGGTCCATaGAGTCATGAGAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: SSYLETTPQTEAKKVCLDAEEGP*SHERWK
Trigger: CTTCCATCTCTCATGACTTCATGGACCCTCCTCTGC...ATCCAGGCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp ACCTCTTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGGGTATGAGGCCCAGGTaGAAGGACAAAGATACCTTT +
Preference number: 4 (lower is better)
Translates to: TSFSSPAPSWKIKKLYSLGMRPR*KDKDTF
Trigger: AAAGGTATCTTTGTCCTTTCACCTGGGCCTCATACC...CAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GCACTGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACATCTGATAGGAATTCCTaGATGATGTCACTCTCACCA +
Preference number: 4 (lower is better)
Translates to: ALAHTDSSKATANTFPHTSDRNS*MMSLSP
Trigger: TGGTGAGAGTGACATCATGCAGGAATTCCTATCAGA...TGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp TCTCCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCTTCATCTGTGTCCCATCATGCCAACCTTTGCTaGGATAGCCTGATATACTTG +
Preference number: 4 (lower is better)
Translates to: SPRAYSKQKAIPSSSVSHHANLC*DSLIYL
Trigger: CAAGTATATCAGGCTATCGCAGCAAAGGTTGGCATG...ATGGGACACAGATGAAGAAGGGATGGCCTTCTGTTTCGAATATGCACGAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp TGGGAGACCCCCTCTTCCCAGGGACAAATTGCAAAAGAAGTCTGGGTAGAAGCCAGGAAACTCATTAGGTaGCAATTTACGTACAAAGGA +
Preference number: 4 (lower is better)
Translates to: WETPSSQGQIAKEVWVEARKLIR*QFTYKG
Trigger: TCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCT...GGCTTCTACCCAGACTTCTTTTGCAATTTGTCCCTGGGAAGAGGGGGTCTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp TTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCACTTCTTCTCTCCTCGTaGATATTCGAAACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: FPHTNILGSPRKTARTHPLLLSS*IFETEG
Trigger: GCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAG...TGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp CCACAAACTTCTCACCATTCTGCTCCACATGTTTGTATCTGGGGACCGATATGGCTTCTTCTCTCCTCGTaGATATTCGAAACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: PQTSHHSAPHVCIWGPIWLLLSS*IFETEG
Trigger: GCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAG...CCATATCGGTCCCCAGATACAAACATGTGGAGCAGAATGGTGAGAAGTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR GCA 90 bp TGTTCTGATAATGAAAATGGCCACTTCCCTGGGAGTCGAGGAAATGTAAAGTTGTCCAGAGGCCAACCTTaGTGGAAGAATGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: CSDNENGHFPGSRGNVKLSRGQP*WKNVLA
Trigger: AGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGA...CAACTTTACATTTCCTCGACTCCCAGGGAAGTGGCCATTTTCATTATCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR GCA 90 bp AGGAGTGGGAAATCAACATGTCTTCTTTTCAGGGTCCTTTGGCTCATTTTAAATATCAGGTCCACCACCTaGTTGTGTGTCGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: RSGKSTCLLFRVLWLILNIRSTT*LCVAPS
Trigger: TGAGGGGGCGACACACAAGCAGGTGGTGGACCTGAT...ATTTAAAATGAGCCAAAGGACCCTGAAAAGAAGACATGTTGATTTCCCACTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp CTGCTTCATGCAAAGAAGGGCTTGATCCTATGGGATCCACGCAGCCACAGGGAACGAGTAGGGGCAAATTaGTATTTTTACAGTTTGAAC +
Preference number: 4 (lower is better)
Translates to: LLHAKKGLILWDPRSHRERVGAN*YFYSLN
Trigger: GTTCAAACTGTAAAAATAGCAATTTGCCCCTACTCG...TTCCCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATGAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp CAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCCACATGTTTGTATCTaGGGACCGATATGGGCACTG +
Preference number: 4 (lower is better)
Translates to: QTAVKQQQTPSLTQTFLVPHVCI*GPIWAL
Trigger: CAGTGCCCATATCGGTCCCCAGATACAAACATGTGG...AACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp GAGCTCGCAGAACACCCTCTCGAAGCACTCATGCATGTAATTGAAATATGGCGTTCTCTCTTCAGGTTCTaGTGTAGGATAGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: ELAEHPLEALMHVIEIWRSLFRF*CRIANS
Trigger: GGAGTTTGCTATCCTACACCAGAACCTGAAGAGAGA...ACGCCATATTTCAATTACATGCATGAGTGCTTCGAGAGGGTGTTCTGCGAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR CCA 90 bp CTTCACATCATCGACTGCCTGATGAAAGAAGTAGGTAACAGCAAGGTCATTGTCAAAGCCACTTTCGAATaGTCAAGCAGGTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LHIIDCLMKEVGNSKVIVKATFE*SSRCLA
Trigger: TGCCAGGCACCTGCTTGACCATTCGAAAGTGGCTTT...GACAATGACCTTGCTGTTACCTACTTCTTTCATCAGGCAGTCGATGATGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR CCA 90 bp ATTTCTTCTTCTGTTGTAAAAAGCCACTTTCGAATGGTCAAGCAGGTGCCTGGCAAAGCCACTTTCGAATaGTCAAGCAGGTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: ISSSVVKSHFRMVKQVPGKATFE*SSRCLA
Trigger: TGCCAGGCACCTGCTTGACCATTCGAAAGTGGCTTT...GCCAGGCACCTGCTTGACCATTCGAAAGTGGCTTTTTACAACAGAAGAAGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR CCA 90 bp TCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAATGCAATTACCTaGTTCTCCAGCTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SLTQTFLVRLERLPGLIQSNAIT*FSSCPS
Trigger: AGAAGGACAGCTGGAGAACCAGGTAATTGCATTTGA...CTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp TCTACCCATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCTCAAATGCAATTACCTaGTTCTCCAGCTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: STHSKGPPNPYVSCLKVSSNAIT*FSSCPS
Trigger: AGAAGGACAGCTGGAGAACCAGGTAATTGCATTTGA...GCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAATGGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp ACCCACTGCAAGTTTCCCCAAGGCCTTGAAGATACTATTGGATCCCTTCCCATCACATCTCCTCTTATCTaGAGACAACTCCACAAACAG +
Preference number: 4 (lower is better)
Translates to: THCKFPQGLEDTIGSLPITSPLI*RQLHKQ
Trigger: CTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGT...GATGGGAAGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp CACTGTCGTACTGTCCATGCCAACCTTTGCTGCGATAGCCTGATATACTTGGTCACATCTCCTCTTATCTaGAGACAACTCCACAAACAG +
Preference number: 4 (lower is better)
Translates to: HCRTVHANLCCDSLIYLVTSPLI*RQLHKQ
Trigger: CTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGT...GACCAAGTATATCAGGCTATCGCAGCAAAGGTTGGCATGGACAGTACGACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR CCA 90 bp ATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCCACTGCAAGTTTCCCCAATCTGAACAGTGCAAATaGATGAAGTTCATAGTTCCA +
Preference number: 4 (lower is better)
Translates to: MGLSFGWHRPLTHCKFPQSEQCK*MKFIVP
Trigger: TGGAACTATGAACTTCATCCATTTGCACTGTTCAGA...TTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp AAGAAAGAGAGCACGAGGGAGGTCATGGATTCTAGTGAAAGGTGTGTAAAAACAAGGTTCAGGTTCCCATaGCATCAACCTCCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: KKESTREVMDSSERCVKTRFRFP*HQPPEP
Trigger: TGGCTCAGGAGGTTGATGCCATGGGAACCTGAACCT...TGTTTTTACACACCTTTCACTAGAATCCATGACCTCCCTCGTGCTCTCTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp TCCCACTCTGAGCGAGTAGGGGCAAATTGCTATTTTTACAGTTTGAACAAAGCTGATGGGGCTATCGTTTaGTTGGCACAGACCACTGAC +
Preference number: 4 (lower is better)
Translates to: SHSERVGANCYFYSLNKADGAIV*LAQTTD
Trigger: GTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATC...AGCTTTGTTCAAACTGTAAAAATAGCAATTTGCCCCTACTCGCTCAGAGTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp TTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGTTCCTCACAGCAGTCCCTCCTaGTCTGGAAAATTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: FLLPSTLLEDKETILLVPHSSPS*SGKFRS
Trigger: TGACCTGAATTTTCCAGACCAGGAGGGACTGCTGTG...AGGAACAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp AAGAGAAAACTGAAAGCTAGGGAGGCTGATTTACCCAAAATTACACAGAGGGAACCCTCAACATTCACGTaGTTCTTGGCCCCGCACGTT +
Preference number: 4 (lower is better)
Translates to: KRKLKAREADLPKITQREPSTFT*FLAPHV
Trigger: AACGTGCGGGGCCAAGAACCACGTGAATGTTGAGGG...TTCCCTCTGTGTAATTTTGGGTAAATCAGCCTCCCTAGCTTTCAGTTTTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR CAA 72 bp CCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTaGTTCCTAGACTCTATGGCAACCCATGAGCCGGAA +
Preference number: 4 (lower is better)
Translates to: PAPSWKIKKLYS*FLDSMATHEPE
Trigger: TTCCGGCTCATGGGTTGCCATAGAGTCTAGGAACAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CAA 72 bp ATTCAAGGACTGTTCAGAATTACCTCTTTTCTCCACTaGAGCTCGCAGAACACCCTCTCGAAGCACTCATGC +
Preference number: 4 (lower is better)
Translates to: IQGLFRITSFLH*SSQNTLSKHSC
Trigger: GCATGAGTGCTTCGAGAGGGTGTTCTGCGAGCTCAAGTGGAGAAAAGAGGTAATTCTGAACAGTCCTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642349.1
CDS-3UTR TCA 90 bp TTCACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATAATAGGAATTCCTGCATaGTGTCACTCTCACCAATTA +
Preference number: 4 (lower is better)
Translates to: FTIQRPTLLEECPGSHEIIGIPA*CHSHQL
Trigger: TAATTGGTGAGAGTGACATCATGCAGGAATTCCTAT...TATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGTGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp ATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAGTACAAAGGAGTGACTaGTCACTTCAAATAAGGCAA +
Preference number: 4 (lower is better)
Translates to: ILGSPRKTARTHPVKTATVQRSD*SLQIRQ
Trigger: TTGCCTTATTTGAAGTGATCAGTCACTCCTTTGTAC...TGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp TGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACAGGTGCCTGGCACAGCTaGTGTATAATTCTGAATGTA +
Preference number: 4 (lower is better)
Translates to: WHIQTAVKQQQTPSLTQTGAWHS*CIILNV
Trigger: TACATTCAGAATTATACATCAGCTGTGCCAGGCACC...TGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp CTACTCTCAGCTCTACGTCGGACACACCATTGTAGTTCTCATCGGATTCTGATAGGTGCCTGGCACAGCTaGTGTATAATTCTGAATGTA +
Preference number: 4 (lower is better)
Translates to: LLSALRRTHHCSSHRILIGAWHS*CIILNV
Trigger: TACATTCAGAATTATACATCAGCTGTGCCAGGCACC...TATCAGAATCCGATGAGAACTACAATGGTGTGTCCGACGTAGAGCTGAGAGTAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR TCA 90 bp CTGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATGTCCTGGCTCACATaGGATAATCAGTCTCTAACT +
Preference number: 4 (lower is better)
Translates to: LAHTDSSKATANTFPHTNMSWLT*DNQSLT
Trigger: AGTTAGAGACTGATTATCTCATGTGAGCCAGGACAT...GTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp CTTCACATCATCGACTGCCTGATGAAAGAAGTAGGTAACAGCAAGGTCATTGTCAAAGGTATGCCTGGATaGCTCAATCTGATTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LHIIDCLMKEVGNSKVIVKGMPG*LNLIGH
Trigger: GTGGCCAATCAGATTGAGTCATCCAGGCATACCTTT...GACAATGACCTTGCTGTTACCTACTTCTTTCATCAGGCAGTCGATGATGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR TCA 90 bp TCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCCTGGATCACATCTCTCTGCTGTaGCCTCGCCATCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: SSYLETTPQTEAKKVCLDHISLL*PRHLEN
Trigger: ATTTTCCAGATGGCGAGGTCACAGCAGAGAGATGTG...ATCCAGGCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp TCTACCCATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCTCAATTCCAGAGACATaGAATTCAGAGGGGGTTATT +
Preference number: 4 (lower is better)
Translates to: STHSKGPPNPYVSCLKVSSIPET*NSEGVI
Trigger: AATAACCCCCTCTGAATTTCATGTCTCTGGAATTGA...GCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAATGGGTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp ATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAGAAGTTGGCAAATTCTaGGATAGGAGAGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: ILGSPRKTARTHPVKTATEVGKF*DRREFH
Trigger: ATGAAACTCTCTCCTATCTCAGAATTTGCCAACTTC...TGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp GGATCCCTCTGCAACTTTACACATTCAGCATTCTCACGTTTTGTACTCTGTGATTCTAGCCAAACAGTATaGTGGCGAGAAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GSLCNFTHSAFSRFVLCDSSQTV*WREGRA
Trigger: TGCTCTCCCTTCTCGCCATCATACTGTTTGGCTAGA...ATCACAGAGTACAAAACGTGAGAATGCTGAATGTGTAAAGTTGCAGAGGGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp AGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCGACCGATATGGGCACTaGTTGCTTTTCTGTGTAATC +
Preference number: 4 (lower is better)
Translates to: SLLEPEGTLDINYVVQSSDRYGH*LLFCVI
Trigger: GATTACACAGAAAAGCAAGCAGTGCCCATATCGGTC...GGAAGACTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp ATTCAAATGCAATTACCTGGTTCTCCAGCTGTCCTTCTTCAGTGCAGGCATGCACATGCCAACCTTTGCTaGGATAGCCTGATATACTTG +
Preference number: 4 (lower is better)
Translates to: IQMQLPGSPAVLLQCRHAHANLC*DSLIYL
Trigger: CAAGTATATCAGGCTATCGCAGCAAAGGTTGGCATG...TGCATGCCTGCACTGAAGAAGGACAGCTGGAGAACCAGGTAATTGCATTTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp ACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCCTCATCCCATTCAAATaGAATTACCTGGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TANTFPHTNILGSPRKTALIPFK*NYLVLQ
Trigger: CTGGAGAACCAGGTAATTGCATTTGAATGGGATGAG...GGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp ACCTCTTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGCTTCTTCTCTCCTCGTaGATATTCGAAACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TSFSSPAPSWKIKKLYSLLLLSS*IFETEG
Trigger: GCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAG...CAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCTGTTTCACAGAAGAGAAATCCAGAGGCCAACCTTaGTGGAAGAATGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GTLDINYVVQSSCFTEEKSRGQP*WKNVLA
Trigger: AGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGA...TTTCTCTTCTGTGAAACAGGAAGACTGAACCACGTAATTAATATCCAAGGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp CACCCTCTCGAAGCACTCATGCATGTAATTGAAATATGGCGTGAAGATTTTAACCAATTCCTTCTCGCCTaGTCGAATCAGGTCCACCAC +
Preference number: 4 (lower is better)
Translates to: HPLEALMHVIEIWREDFNQFLLA*SNQVHH
Trigger: GTGGTGGACCTGATTCGAGCAGGCGAGAAGGAATTG...GTTAAAATCTTCACGCCATATTTCAATTACATGCATGAGTGCTTCGAGAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR GCA 90 bp ACCTCTTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGGCAGGGGCAAATGGCTaGCAGCATAACAAAATAAGA +
Preference number: 4 (lower is better)
Translates to: TSFSSPAPSWKIKKLYSLAGANG*QHNKIR
Trigger: TCTTATTTTGTTATGCTGGCAGCCATTTGCCCCTGC...CAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp CTGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACAAAGCACCAAGTGAATaGTATGCCAGAAAGGGAACA +
Preference number: 4 (lower is better)
Translates to: LAHTDSSKATANTFPHTNKAPSE*YARKGT
Trigger: TGTTCCCTTTCTGGCATAGCATTCACTTGGTGCTTT...GTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR GCA 90 bp AGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCGAAGAGTCACAACACTaGTTCATGCAAAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLLEPEGTLDINYVVQSSEESQH*FMQRRA
Trigger: AGCCCTTCTTTGCATGAAGCAGTGTTGTGACTCTTC...GGAAGACTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR GCA 90 bp CGTTCAGTCTCCTTTCAATTAAAACTTGGGAGATCCAATCTAATCAACCATATTGGATCCTGCTGGTTCTaGTGGGATGAAGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RSVSFQLKLGRSNLINHIGSCWF*WDEAGG
Trigger: GCCCCCAGCTTCATCCCAGCAGAACCAGCAGGATCC...AATATGGTTGATTAGATTGGATCTCCCAAGTTTTAATTGAAAGGAGACTGAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp TCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCCTGGATGTCAGTGCCCTATTTTaGTGCTCCAAGTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SSYLETTPQTEAKKVCLDVSALF*CSKCWV
Trigger: AACCCAGCACTTGGAGCAGCAAAATAGGGCACTGAC...ATCCAGGCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR GCA 90 bp TTTCTCAGGGTCTACATTTTCTCCTGGGCCATAAAAAGCTCTGAGCTTCTACCCTTCATCTCCTGTCAGTaGCCTATTTTGCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: FLRVYIFSWAIKSSELLPFISCQ*PILLLQ
Trigger: TTGGAGCAGCAAAATAGGGCACTGACAGGAGATGAA...GGGTAGAAGCTCAGAGCTTTTTATGGCCCAGGAGAAAATGTAGACCCTGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GGAGAAAACCCAGATAAAATTCCCAGAGCCCAATGTTCTTTCTACTGTACTAAAAGGCCTGGCGTGATGTaGTCAGGTTTAGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: GENPDKIPRAQCSFYCTKRPGVM*SGLGEQ
Trigger: CTGTTCCCCTAAACCTGAGCACATCACGCCAGGCCT...TTTAGTACAGTAGAAAGAACATTGGGCTCTGGGAATTTTATCTGGGTTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp CACATCTCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCCCAACGAGTCGTCACTaGGATCTAGGTTATCTGCCT +
Preference number: 4 (lower is better)
Translates to: HISSYLETTPQTEAKKVCPTSRH*DLGYLP
Trigger: AGGCAGATAACCTAGATCCCAGTGACGACTCGTTGG...GCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp AATCATAGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGCCAACGAGTCGTCACTaGGATCTAGGTTATCTGCCT +
Preference number: 4 (lower is better)
Translates to: NHSLLEPEGTLDINYVVQPTSRH*DLGYLP
Trigger: AGGCAGATAACCTAGATCCCAGTGACGACTCGTTGG...CTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCTATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp CAGAAGCTAAAAAGGTATGCCTGGATGACTCAATCTGATTGGCCACATCTTTCTCCAACGAGTCGTCACTaGGATCTAGGTTATCTGCCT +
Preference number: 4 (lower is better)
Translates to: QKLKRYAWMTQSDWPHLSPTSRH*DLGYLP
Trigger: AGGCAGATAACCTAGATCCCAGTGACGACTCGTTGG...AGAAAGATGTGGCCAATCAGATTGAGTCATCCAGGCATACCTTTTTAGCTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp CAGAAGCTAAAAAGGTATGCCTGGATGACTCAATCTGATTGGCCACATCTTTCTATCTGGGGACCGATATaGGCACTGCTTGCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: QKLKRYAWMTQSDWPHLSIWGPI*ALLAFL
Trigger: CAGAAAAGCAAGCAGTGCCCATATCGGTCCCCAGAT...AGAAAGATGTGGCCAATCAGATTGAGTCATCCAGGCATACCTTTTTAGCTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp GGATCCCTCTGCAACTTTACACATTCAGCATTCTCACGTTTTGTACTCTGTGATAAAGCCACTTTCGAATaGTCAAGCAGGTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GSLCNFTHSAFSRFVLCDKATFE*SSRCLA
Trigger: TGCCAGGCACCTGCTTGACCATTCGAAAGTGGCTTT...ATCACAGAGTACAAAACGTGAGAATGCTGAATGTGTAAAGTTGCAGAGGGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp TCTCCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCTTCATCTGTGTCCCATTCAAATGCAATTACCTaGTTCTCCAGCTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SPRAYSKQKAIPSSSVSHSNAIT*FSSCPS
Trigger: AGAAGGACAGCTGGAGAACCAGGTAATTGCATTTGA...ATGGGACACAGATGAAGAAGGGATGGCCTTCTGTTTCGAATATGCACGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR CCA 90 bp TTTTCTAGATATTCTTCCAATCCCCGACGTCGGGCATCTAATTGTTGTTCTGATAGAGGCCAACCTTGCTaGAAGAATGTCCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: FSRYSSNPRRRASNCCSDRGQPC*KNVLAH
Trigger: GTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCT...ATCAGAACAACAATTAGATGCCCGACGTCGGGGATTGGAAGAATATCTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR CCA 90 bp GGATCCCTCTGCAACTTTACACATTCAGCATTCTCACGTTTTGTACTCTGTGATACAGAGCTTAGGGGCTaGGAATATTGTCCTACCCCA +
Preference number: 4 (lower is better)
Translates to: GSLCNFTHSAFSRFVLCDTELRG*EYCPTP
Trigger: TGGGGTAGGACAATATTCCCAGCCCCTAAGCTCTGT...ATCACAGAGTACAAAACGTGAGAATGCTGAATGTGTAAAGTTGCAGAGGGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp GGATCCCTCTGCAACTTTACACATTCAGCATTCTCACGTTTTGTACTCTGTGATATTGCAAAAGAAGTCTaGGTAGAAGCCTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSLCNFTHSAFSRFVLCDIAKEV*VEASLG
Trigger: GCCCAGGGAGGCTTCTACCCAGACTTCTTTTGCAAT...ATCACAGAGTACAAAACGTGAGAATGCTGAATGTGTAAAGTTGCAGAGGGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp ACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAAGGATGAAACTAAATaGGCCAGGCATGAGGATGTT +
Preference number: 4 (lower is better)
Translates to: TANTFPHTNILGSPRKTAKDETK*ARHEDV
Trigger: AACATCCTCATGCCTGGCCCATTTAGTTTCATCCTT...GGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp ACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTCAAACAATTTTAGAGTaGTTAGCTCTAGAACAAGGA +
Preference number: 4 (lower is better)
Translates to: TSLLQLGALLLGHFQKGCQTILE*LALEQG
Trigger: TCCTTGTTCTAGAGCTAACCACTCTAAAATTGTTTG...ACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
3UTR CAA 72 bp TATACCACAAACTTCTCACCATTCTGCTCCACATGTTaGTATCTGGGGACCGATATGGGCACTGCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: YTTNFSPFCSTC*YLGTDMGTACF
Trigger: AAAGCAAGCAGTGCCCATATCGGTCCCCAGATACAAACATGTGGAGCAGAATGGTGAGAAGTTTGTGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
3UTR CAA 72 bp GGAAGTCACAGAGAATGCCGTAGTTATGGGTGGTTATaGGTCAGGAATGGAGGAGGTAAAACCTCATGTACA +
Preference number: 4 (lower is better)
Translates to: GSHRECRSYGWL*VRNGGGKTSCT
Trigger: TGTACATGAGGTTTTACCTCCTCCATTCCTGACCAATAACCACCCATAACTACGGCATTCTCTGTGACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp TTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAATAGGAATTCCTGCATaGTGTCACTCTCACCAATTA +
Preference number: 4 (lower is better)
Translates to: FPHTNILGSPRKTARTHPIGIPA*CHSHQL
Trigger: TAATTGGTGAGAGTGACATCATGCAGGAATTCCTAT...TGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp ACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATAATCTTACGTACAAAGGAGTaGCTGATCACTTCAAATAAG +
Preference number: 4 (lower is better)
Translates to: TIQRPTLLEECPGSHEIILRTKE*LITSNK
Trigger: CTTATTTGAAGTGATCAGTCACTCCTTTGTACGTAA...GATTATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp CACTGTCGTACTGTCCATGCCAACCTTTGCTGCGATAGCCTGATATACTTGGTCTTACGTACAAAGGAGTaGCTGATCACTTCAAATAAG +
Preference number: 4 (lower is better)
Translates to: HCRTVHANLCCDSLIYLVLRTKE*LITSNK
Trigger: CTTATTTGAAGTGATCAGTCACTCCTTTGTACGTAA...GACCAAGTATATCAGGCTATCGCAGCAAAGGTTGGCATGGACAGTACGACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR TCA 90 bp GCACTGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACATGGCCACATCTTTCTTaGTATAACTTCTCATCTAGA +
Preference number: 4 (lower is better)
Translates to: ALAHTDSSKATANTFPHTWPHLS*YNFSSR
Trigger: TCTAGATGAGAAGTTATATCAAGAAAGATGTGGCCA...TGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp ACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCTTTTCAAGTCCTTCATaGGGAGAGGTATTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: TANTFPHTNILGSPRKTAFSSPS*GEVFFP
Trigger: AGGGAAAAATACCTCTCCTCATGAAGGACTTGAAAA...GGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR GCA 90 bp CTACTCTCAGCTCTACGTCGGACACACCATTGTAGTTCTCATCGGATTCTGATATCTGATAGGAATTCCTaGATGATGTCACTCTCACCA +
Preference number: 4 (lower is better)
Translates to: LLSALRRTHHCSSHRILISDRNS*MMSLSP
Trigger: TGGTGAGAGTGACATCATGCAGGAATTCCTATCAGA...TATCAGAATCCGATGAGAACTACAATGGTGTGTCCGACGTAGAGCTGAGAGTAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp AATCATAGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGGTCCATGCCAACCTTTaGTGCGATAGCCTGATATAC +
Preference number: 4 (lower is better)
Translates to: NHSLLEPEGTLDINYVVQVHANL*CDSLIY
Trigger: GTATATCAGGCTATCGCAGCAAAGGTTGGCATGGAC...CTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCTATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp TCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCCTGGATGTCCATGCCAACCTTTaGTGCGATAGCCTGATATAC +
Preference number: 4 (lower is better)
Translates to: SSYLETTPQTEAKKVCLDVHANL*CDSLIY
Trigger: GTATATCAGGCTATCGCAGCAAAGGTTGGCATGGAC...ATCCAGGCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp TCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGAGGAAACTCATTAGGTaGCAATTTACGTACAAAGGA +
Preference number: 4 (lower is better)
Translates to: SLTQTFLVRLERLPGLIQRKLIR*QFTYKG
Trigger: TCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCT...CTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp CTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCCAGCATAACAAAAGGAAACTCATTAGGTaGCAATTTACGTACAAAGGA +
Preference number: 4 (lower is better)
Translates to: LSSLIPYHAGANGCQHNKRKLIR*QFTYKG
Trigger: TCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCT...TTTGTTATGCTGGCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCTGTTTCACAGAAGAGAAAGAATGGTCAAGCAGGTaGCTGGCACAGCTGATGTAT +
Preference number: 4 (lower is better)
Translates to: GTLDINYVVQSSCFTEEKEWSSR*LAQLMY
Trigger: ATACATCAGCTGTGCCAGGCACCTGCTTGACCATTC...TTTCTCTTCTGTGAAACAGGAAGACTGAACCACGTAATTAATATCCAAGGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp TTTTCTAGATATTCTTCCAATCCCCGACGTCGGGCATCTAATTGTTGTTCTGATGAATGGTCAAGCAGGTaGCTGGCACAGCTGATGTAT +
Preference number: 4 (lower is better)
Translates to: FSRYSSNPRRRASNCCSDEWSSR*LAQLMY
Trigger: ATACATCAGCTGTGCCAGGCACCTGCTTGACCATTC...ATCAGAACAACAATTAGATGCCCGACGTCGGGGATTGGAAGAATATCTAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp CTACTCTCAGCTCTACGTCGGACACACCATTGTAGTTCTCATCGGATTCTGATACTTCACATCATCGACTaGCTGATGAAAGAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: LLSALRRTHHCSSHRILILHIID*LMKEVG
Trigger: ACCTACTTCTTTCATCAGGCAGTCGATGATGTGAAG...TATCAGAATCCGATGAGAACTACAATGGTGTGTCCGACGTAGAGCTGAGAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp ATTCAAATGCAATTACCTGGTTCTCCAGCTGTCCTTCTTCAGTGCAGGCATGCACTTCACATCATCGACTaGCTGATGAAAGAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: IQMQLPGSPAVLLQCRHALHIID*LMKEVG
Trigger: ACCTACTTCTTTCATCAGGCAGTCGATGATGTGAAG...TGCATGCCTGCACTGAAGAAGGACAGCTGGAGAACCAGGTAATTGCATTTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp CAACACTGCTTAGTAGAATTGACTACAACCAATTATGACTGTCTCCCAGTTAGAATGGCTGTGATAACGTaGCCCTTCCTCCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: QHCLVELTTTNYDCLPVRMAVIT*PFLLES
Trigger: TGACTCCAGGAGGAAGGGGCACGTTATCACAGCCAT...TCTAACTGGGAGACAGTCATAATTGGTTGTAGTCAATTCTACTAAGCAGTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTCTCATCCCATTCAAATaGAATTACCTGGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ATANTFPHTNILGSPRKTLIPFK*NYLVLQ
Trigger: CTGGAGAACCAGGTAATTGCATTTGAATGGGATGAG...AGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp CAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCTTCTTCTCTCCTCGTaGATATTCGAAACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: QTAVKQQQTPSLTQTFLVLLLSS*IFETEG
Trigger: GCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAG...AACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp CTTCACATCATCGACTGCCTGATGAAAGAAGTAGGTAACAGCAAGGTCATTGTCCTTCTTCTCTCCTCGTaGATATTCGAAACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LHIIDCLMKEVGNSKVIVLLLSS*IFETEG
Trigger: GCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAG...GACAATGACCTTGCTGTTACCTACTTCTTTCATCAGGCAGTCGATGATGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp AGGAGTGGGAAATCAACATGTCTTCTTTTCAGGGTCCTTTGGCTCATTTTAAATCAATTCCTTCTCGCCTaGTCGAATCAGGTCCACCAC +
Preference number: 4 (lower is better)
Translates to: RSGKSTCLLFRVLWLILNQFLLA*SNQVHH
Trigger: GTGGTGGACCTGATTCGAGCAGGCGAGAAGGAATTG...ATTTAAAATGAGCCAAAGGACCCTGAAAAGAAGACATGTTGATTTCCCACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GGAGAAAACCCAGATAAAATTCCCAGAGCCCAATGTTCTTTCTACTGTACTAAAAGACCACTGACCCACTaGAAGTTTCCCCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: GENPDKIPRAQCSFYCTKRPLTH*KFPQGL
Trigger: AAGGCCTTGGGGAAACTTGCAGTGGGTCAGTGGTCT...TTTAGTACAGTAGAAAGAACATTGGGCTCTGGGAATTTTATCTGGGTTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR GCA 90 bp ACCCACTGCAAGTTTCCCCAAGGCCTTGAAGATACTATTGGATCCCTTCCCATCTTCCTAAATAAATTCTaGCAACAGGCCAACTACCTA +
Preference number: 4 (lower is better)
Translates to: THCKFPQGLEDTIGSLPIFLNKF*QQANYL
Trigger: TAGGTAGTTGGCCTGTTGGCAGAATTTATTTAGGAA...GATGGGAAGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp AGGAGTGGGAAATCAACATGTCTTCTTTTCAGGGTCCTTTGGCTCATTTTAAATCATCACCCAAGGCCGTaGATGGGTGGAAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: RSGKSTCLLFRVLWLILNHHPRP*MGGREE
Trigger: TTCTTCTCTTCCACCCATGCACGGCCTTGGGTGATG...ATTTAAAATGAGCCAAAGGACCCTGAAAAGAAGACATGTTGATTTCCCACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp TTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGTTCCTCACAACACTGCTTCATaGAAAGAAGGGCTTGATCCT +
Preference number: 4 (lower is better)
Translates to: FLLPSTLLEDKETILLVPHNTAS*KEGLDP
Trigger: AGGATCAAGCCCTTCTTTGCATGAAGCAGTGTTGTG...AGGAACAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp CAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTTCTCTCTTCAGGTTCTaGTGTAGGATAGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: QTAVKQQQTPSLTQTFLVSLFRF*CRIANS
Trigger: GGAGTTTGCTATCCTACACCAGAACCTGAAGAGAGA...AACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp AGCAGGTGCCTGGCACAGCTGATGTATAATTCTGAATGTAGAGTTTGTGAGGAAATTCTGTTCCAGCACTaGCACATACAGACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: SRCLAQLMYNSECRVCEEILFQH*HIQTAV
Trigger: TACTGCTGTCTGTATGTGCCAGTGCTGGAACAGAAT...TTCCTCACAAACTCTACATTCAGAATTATACATCAGCTGTGCCAGGCACCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR CCA 90 bp AGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAATTCTGTTCCAGCACTaGCACATACAGACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: SKATANTFPHTNILGSPRILFQH*HIQTAV
Trigger: TACTGCTGTCTGTATGTGCCAGTGCTGGAACAGAAT...TCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp AGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCACATCTCCTCTTATCTaGAGACAACTCCACAAACAG +
Preference number: 4 (lower is better)
Translates to: SLLEPEGTLDINYVVQSSTSPLI*RQLHKQ
Trigger: CTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGT...GGAAGACTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp ATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACATCTGAACAGTGCAAATaGATGAAGTTCATAGTTCCA +
Preference number: 4 (lower is better)
Translates to: ILGSPRKTARTHPVKTATSEQCK*MKFIVP
Trigger: TGGAACTATGAACTTCATCCATTTGCACTGTTCAGA...TGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp GGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCATTCAAGCTGTCGCACAAACAATTTTAGAGTaGTTAGCTCTAGAACAAGGA +
Preference number: 4 (lower is better)
Translates to: GPPNPYVSCLKVSIQAVAQTILE*LALEQG
Trigger: TCCTTGTTCTAGAGCTAACCACTCTAAAATTGTTTG...TGCGACAGCTTGAATGCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp TGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATGTGTAATCATAAAATaGTTGTCCCAACGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: WHIQTAVKQQQTPSLTQTCVIIK*LSQRVV
Trigger: GACGACTCGTTGGGACAATCATTTTATGATTACACA...TGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp AGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGATTTGCTGCGATAGCCTaGTATACTTGGTCTGTAGTA +
Preference number: 4 (lower is better)
Translates to: SKATANTFPHTNILGSPRFAAIA*YTWSVV
Trigger: TACTACAGACCAAGTATATCAGGCTATCGCAGCAAA...TCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp CAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTTTTGCTGCGATAGCCTaGTATACTTGGTCTGTAGTA +
Preference number: 4 (lower is better)
Translates to: QTAVKQQQTPSLTQTFLVFAAIA*YTWSVV
Trigger: TACTACAGACCAAGTATATCAGGCTATCGCAGCAAA...AACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp TTTCTCAGGGTCTACATTTTCTCCTGGGCCATAAAAAGCTCTGAGCTTCTACCCGTACAAAGGAGTGACTaGTCACTTCAAATAAGGCAA +
Preference number: 4 (lower is better)
Translates to: FLRVYIFSWAIKSSELLPVQRSD*SLQIRQ
Trigger: TTGCCTTATTTGAAGTGATCAGTCACTCCTTTGTAC...GGGTAGAAGCTCAGAGCTTTTTATGGCCCAGGAGAAAATGTAGACCCTGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp ATTCAAATGCAATTACCTGGTTCTCCAGCTGTCCTTCTTCAGTGCAGGCATGCAGTACAAAGGAGTGACTaGTCACTTCAAATAAGGCAA +
Preference number: 4 (lower is better)
Translates to: IQMQLPGSPAVLLQCRHAVQRSD*SLQIRQ
Trigger: TTGCCTTATTTGAAGTGATCAGTCACTCCTTTGTAC...TGCATGCCTGCACTGAAGAAGGACAGCTGGAGAACCAGGTAATTGCATTTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR TCA 90 bp CTGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACTTACGTACAAAGGAGTaGCTGATCACTTCAAATAAG +
Preference number: 4 (lower is better)
Translates to: LAHTDSSKATANTFPHTNLRTKE*LITSNK
Trigger: CTTATTTGAAGTGATCAGTCACTCCTTTGTACGTAA...GTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp GGATCCCTCTGCAACTTTACACATTCAGCATTCTCACGTTTTGTACTCTGTGATGGTGCCTGGCACAGCTaGTGTATAATTCTGAATGTA +
Preference number: 4 (lower is better)
Translates to: GSLCNFTHSAFSRFVLCDGAWHS*CIILNV
Trigger: TACATTCAGAATTATACATCAGCTGTGCCAGGCACC...ATCACAGAGTACAAAACGTGAGAATGCTGAATGTGTAAAGTTGCAGAGGGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp TTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCACTTGACTTGACCTCCTaGTTCTTTCAAAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: FPHTNILGSPRKTARTHPLDLTS*FFQRFS
Trigger: AGAAAATCTTTGAAAGAATCAGGAGGTCAAGTCAAG...TGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp TCCCACTCTGAGCGAGTAGGGGCAAATTGCTATTTTTACAGTTTGAACAAAGCTCACAGAAGAGAAAACTaGAAGCTAGGGAGGCTGATT +
Preference number: 4 (lower is better)
Translates to: SHSERVGANCYFYSLNKAHRREN*KLGRLI
Trigger: AATCAGCCTCCCTAGCTTTCAGTTTTCTCTTCTGTG...AGCTTTGTTCAAACTGTAAAAATAGCAATTTGCCCCTACTCGCTCAGAGTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp GGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCTGTTTCACAGAAGAGAAAAAAGGTATGCCTGGATaGCTCAATCTGATTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GTLDINYVVQSSCFTEEKKGMPG*LNLIGH
Trigger: GTGGCCAATCAGATTGAGTCATCCAGGCATACCTTT...TTTCTCTTCTGTGAAACAGGAAGACTGAACCACGTAATTAATATCCAAGGTCCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp AGGAGTGGGAAATCAACATGTCTTCTTTTCAGGGTCCTTTGGCTCATTTTAAATCACATCTCTCTGCTGTaGCCTCGCCATCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: RSGKSTCLLFRVLWLILNHISLL*PRHLEN
Trigger: ATTTTCCAGATGGCGAGGTCACAGCAGAGAGATGTG...ATTTAAAATGAGCCAAAGGACCCTGAAAAGAAGACATGTTGATTTCCCACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp TGTTCTGATAATGAAAATGGCCACTTCCCTGGGAGTCGAGGAAATGTAAAGTTGAGGTTATCTGCCTCATaGGGAGGTACAGATAACACT +
Preference number: 4 (lower is better)
Translates to: CSDNENGHFPGSRGNVKLRLSAS*GGTDNT
Trigger: AGTGTTATCTGTACCTCCTCATGAGGCAGATAACCT...CAACTTTACATTTCCTCGACTCCCAGGGAAGTGGCCATTTTCATTATCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR TCA 90 bp CAGAAGCTAAAAAGGTATGCCTGGATGACTCAATCTGATTGGCCACATCTTTCTAGGTTATCTGCCTCATaGGGAGGTACAGATAACACT +
Preference number: 4 (lower is better)
Translates to: QKLKRYAWMTQSDWPHLSRLSAS*GGTDNT
Trigger: AGTGTTATCTGTACCTCCTCATGAGGCAGATAACCT...AGAAAGATGTGGCCAATCAGATTGAGTCATCCAGGCATACCTTTTTAGCTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp TTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGTTCCTAACAGCTTCTACTGCTaGATGAATCTAGCCAAACAG +
Preference number: 4 (lower is better)
Translates to: FLLPSTLLEDKETILLVPNSFYC*MNLAKQ
Trigger: CTGTTTGGCTAGATTCATTCAGCAGTAGAAGCTGTT...AGGAACAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp CACCCTCTCGAAGCACTCATGCATGTAATTGAAATATGGCGTGAAGATTTTAACGTCCATGCCAACCTTTaGTGCGATAGCCTGATATAC +
Preference number: 4 (lower is better)
Translates to: HPLEALMHVIEIWREDFNVHANL*CDSLIY
Trigger: GTATATCAGGCTATCGCAGCAAAGGTTGGCATGGAC...GTTAAAATCTTCACGCCATATTTCAATTACATGCATGAGTGCTTCGAGAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp TTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAAGGAAACTCATTAGGTaGCAATTTACGTACAAAGGA +
Preference number: 4 (lower is better)
Translates to: FPHTNILGSPRKTARTHPRKLIR*QFTYKG
Trigger: TCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCT...TGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp CACATCTCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCTCTGTGTCCCATCGCTaGATCTCATCCCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: HISSYLETTPQTEAKKVCSVSHR*ISSHSN
Trigger: ATTTGAATGGGATGAGATGCAGCGATGGGACACAGA...GCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp AAGAAAGAGAGCACGAGGGAGGTCATGGATTCTAGTGAAAGGTGTGTAAAAACAATCCCTTCCCATCACTaGTGTTTAAGGAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: KKESTREVMDSSERCVKTIPSHH*CLRKSQ
Trigger: CTGTGACTTCCTTAAACAGCAGTGATGGGAAGGGAT...TGTTTTTACACACCTTTCACTAGAATCCATGACCTCCCTCGTGCTCTCTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp CAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCAGTTTGAACAAAGCTaGTGCCAAGTCTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: QTAVKQQQTPSLTQTFLVQFEQS*CQVSLA
Trigger: TGCTAAAGAGACTTGGCACCAGCTTTGTTCAAACTG...AACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp TTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGTTCCTCAGTTTGAACAAAGCTaGTGCCAAGTCTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: FLLPSTLLEDKETILLVPQFEQS*CQVSLA
Trigger: TGCTAAAGAGACTTGGCACCAGCTTTGTTCAAACTG...AGGAACAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp TCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCCTGGATGAAACAGCAGTATGCTaGGGTCAACAGATCAAACAG +
Preference number: 4 (lower is better)
Translates to: SSYLETTPQTEAKKVCLDETAVC*GQQIKQ
Trigger: CTGTTTGATCTGTTGACCCCAGCATACTGCTGTTTC...ATCCAGGCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368843.8
3UTR CAA 72 bp GAGACTTTCCAACCACCCCAACACTGCTTAGTAGAATaGACTACAACCAATTATGACTGTCTCCCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: ETFQPPQHCLVE*TTTNYDCLPVR
Trigger: TCTAACTGGGAGACAGTCATAATTGGTTGTAGTCAATTCTACTAAGCAGTGTTGGGGTGGTTGGAAAGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp AGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAGTACAAAGGAGTGACTaGTCACTTCAAATAAGGCAA +
Preference number: 4 (lower is better)
Translates to: SKATANTFPHTNILGSPRVQRSD*SLQIRQ
Trigger: TTGCCTTATTTGAAGTGATCAGTCACTCCTTTGTAC...TCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp AGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCTGGCCACATCTTTCTTaGTATAACTTCTCATCTAGA +
Preference number: 4 (lower is better)
Translates to: SLLEPEGTLDINYVVQSSWPHLS*YNFSSR
Trigger: TCTAGATGAGAAGTTATATCAAGAAAGATGTGGCCA...GGAAGACTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp CGTTCAGTCTCCTTTCAATTAAAACTTGGGAGATCCAATCTAATCAACCATATTCCTCTTTTCTCCACTTaGGCTCGCAGAACACCCTCT +
Preference number: 4 (lower is better)
Translates to: RSVSFQLKLGRSNLINHIPLFST*ARRTPS
Trigger: AGAGGGTGTTCTGCGAGCTCAAGTGGAGAAAAGAGG...AATATGGTTGATTAGATTGGATCTCCCAAGTTTTAATTGAAAGGAGACTGAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp AGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGATCAATTCCAGAGACATaGAATTCAGAGGGGGTTATT +
Preference number: 4 (lower is better)
Translates to: SKATANTFPHTNILGSPRSIPET*NSEGVI
Trigger: AATAACCCCCTCTGAATTTCATGTCTCTGGAATTGA...TCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp AAGAAAGAGAGCACGAGGGAGGTCATGGATTCTAGTGAAAGGTGTGTAAAAACATATCACTCCCCTCTTTaGTTCTATTCCTTACCACAG +
Preference number: 4 (lower is better)
Translates to: KKESTREVMDSSERCVKTYHSPL*FYSLPQ
Trigger: CTGTGGTAAGGAATAGAATCAAAGAGGGGAGTGATA...TGTTTTTACACACCTTTCACTAGAATCCATGACCTCCCTCGTGCTCTCTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp CAGGAGAAAACCCAGATAAAATTCCCAGAGCCCAATGTTCTTTCTACTGTACTAGACCGATATGGGCACTaGTTGCTTTTCTGTGTAATC +
Preference number: 4 (lower is better)
Translates to: QEKTQIKFPEPNVLSTVLDRYGH*LLFCVI
Trigger: GATTACACAGAAAAGCAAGCAGTGCCCATATCGGTC...TAGTACAGTAGAAAGAACATTGGGCTCTGGGAATTTTATCTGGGTTTTCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp TTTGTATCTGGGGACCGATATGGGCACTGCTTGCTTTTCTGTGTAATCATAAAAGACCGATATGGGCACTaGTTGCTTTTCTGTGTAATC +
Preference number: 4 (lower is better)
Translates to: FVSGDRYGHCLLFCVIIKDRYGH*LLFCVI
Trigger: GATTACACAGAAAAGCAAGCAGTGCCCATATCGGTC...TTTTATGATTACACAGAAAAGCAAGCAGTGCCCATATCGGTCCCCAGATACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR GCA 90 bp AATCATAGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGACACAGCTGCCTCCCTaGCATGTAAACATTATATAC +
Preference number: 4 (lower is better)
Translates to: NHSLLEPEGTLDINYVVQTQLPP*HVNIIY
Trigger: GTATATAATGTTTACATGGCAGGGAGGCAGCTGTGT...CTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCTATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp CTACTCTCAGCTCTACGTCGGACACACCATTGTAGTTCTCATCGGATTCTGATAAGGAAACTCATTAGGTaGCAATTTACGTACAAAGGA +
Preference number: 4 (lower is better)
Translates to: LLSALRRTHHCSSHRILIRKLIR*QFTYKG
Trigger: TCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCT...TATCAGAATCCGATGAGAACTACAATGGTGTGTCCGACGTAGAGCTGAGAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp CAGAAGCTAAAAAGGTATGCCTGGATGACTCAATCTGATTGGCCACATCTTTCTCTCATCCCATTCAAATaGAATTACCTGGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QKLKRYAWMTQSDWPHLSLIPFK*NYLVLQ
Trigger: CTGGAGAACCAGGTAATTGCATTTGAATGGGATGAG...AGAAAGATGTGGCCAATCAGATTGAGTCATCCAGGCATACCTTTTTAGCTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp CAGGAGAAAACCCAGATAAAATTCCCAGAGCCCAATGTTCTTTCTACTGTACTATCTGTGTCCCATCGCTaGATCTCATCCCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: QEKTQIKFPEPNVLSTVLSVSHR*ISSHSN
Trigger: ATTTGAATGGGATGAGATGCAGCGATGGGACACAGA...TAGTACAGTAGAAAGAACATTGGGCTCTGGGAATTTTATCTGGGTTTTCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp GGAGAAAACCCAGATAAAATTCCCAGAGCCCAATGTTCTTTCTACTGTACTAAAAGTGAGCTATGTTCATaGCACCACATTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GENPDKIPRAQCSFYCTKSELCS*HHIPVW
Trigger: CCAGACTGGAATGTGGTGGCATGAACATAGCTCACT...TTTAGTACAGTAGAAAGAACATTGGGCTCTGGGAATTTTATCTGGGTTTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR GCA 90 bp AATCATAGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGCTGAGCCTGACTTGGTaGTTCTTATGCATTATCTAC +
Preference number: 4 (lower is better)
Translates to: NHSLLEPEGTLDINYVVQLSLTW*FLCIIY
Trigger: GTAGATAATGCATAAGAAGCACCAAGTCAGGCTCAG...CTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCTATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR GCA 90 bp AAGAAAGAGAGCACGAGGGAGGTCATGGATTCTAGTGAAAGGTGTGTAAAAACACAACCACCCCAACACTaGTTAGTAGAATTGACTACA +
Preference number: 4 (lower is better)
Translates to: KKESTREVMDSSERCVKTQPPQH*LVELTT
Trigger: TGTAGTCAATTCTACTAAGCAGTGTTGGGGTGGTTG...TGTTTTTACACACCTTTCACTAGAATCCATGACCTCCCTCGTGCTCTCTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp TTTCTCAGGGTCTACATTTTCTCCTGGGCCATAAAAAGCTCTGAGCTTCTACCCCGAGTAGGGGCAAATTaGTATTTTTACAGTTTGAAC +
Preference number: 4 (lower is better)
Translates to: FLRVYIFSWAIKSSELLPRVGAN*YFYSLN
Trigger: GTTCAAACTGTAAAAATAGCAATTTGCCCCTACTCG...GGGTAGAAGCTCAGAGCTTTTTATGGCCCAGGAGAAAATGTAGACCCTGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp AATCATAGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGGAAGAAACAGCAGTATaGTGGGGTCAACAGATCAAA +
Preference number: 4 (lower is better)
Translates to: NHSLLEPEGTLDINYVVQEETAV*WGQQIK
Trigger: TTTGATCTGTTGACCCCAGCATACTGCTGTTTCTTC...CTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCTATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CCA 90 bp AATCATAGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGACATCTCCTCTTATCTaGAGACAACTCCACAAACAG +
Preference number: 4 (lower is better)
Translates to: NHSLLEPEGTLDINYVVQTSPLI*RQLHKQ
Trigger: CTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGT...CTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCTATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp AAGAAAGAGAGCACGAGGGAGGTCATGGATTCTAGTGAAAGGTGTGTAAAAACATCCCCAGCACCCTCTTaGAAGATAAAGAAACTATAC +
Preference number: 4 (lower is better)
Translates to: KKESTREVMDSSERCVKTSPAPS*KIKKLY
Trigger: GTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGA...TGTTTTTACACACCTTTCACTAGAATCCATGACCTCCCTCGTGCTCTCTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp CACATCTCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCTGTGTAATCATAAAATaGTTGTCCCAACGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: HISSYLETTPQTEAKKVCCVIIK*LSQRVV
Trigger: GACGACTCGTTGGGACAATCATTTTATGATTACACA...GCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp GGATCCCTCTGCAACTTTACACATTCAGCATTCTCACGTTTTGTACTCTGTGATATAGGAATTCCTGCATaGTGTCACTCTCACCAATTA +
Preference number: 4 (lower is better)
Translates to: GSLCNFTHSAFSRFVLCDIGIPA*CHSHQL
Trigger: TAATTGGTGAGAGTGACATCATGCAGGAATTCCTAT...ATCACAGAGTACAAAACGTGAGAATGCTGAATGTGTAAAGTTGCAGAGGGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp AATCATAGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGGTACAAAGGAGTGACTaGTCACTTCAAATAAGGCAA +
Preference number: 4 (lower is better)
Translates to: NHSLLEPEGTLDINYVVQVQRSD*SLQIRQ
Trigger: TTGCCTTATTTGAAGTGATCAGTCACTCCTTTGTAC...CTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCTATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp CAGAAGCTAAAAAGGTATGCCTGGATGACTCAATCTGATTGGCCACATCTTTCTGTACAAAGGAGTGACTaGTCACTTCAAATAAGGCAA +
Preference number: 4 (lower is better)
Translates to: QKLKRYAWMTQSDWPHLSVQRSD*SLQIRQ
Trigger: TTGCCTTATTTGAAGTGATCAGTCACTCCTTTGTAC...AGAAAGATGTGGCCAATCAGATTGAGTCATCCAGGCATACCTTTTTAGCTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp GTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAACTTGACTTGACCTCCTaGTTCTTTCAAAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: VKQQQTPSLTQTFLVRLELDLTS*FFQRFS
Trigger: AGAAAATCTTTGAAAGAATCAGGAGGTCAAGTCAAG...TTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp CAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTTTCATGTTCTTGACTTaGCCTCCTGATTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: QTAVKQQQTPSLTQTFLVFMFLT*PPDSFK
Trigger: TTTGAAAGAATCAGGAGGTCAAGTCAAGAACATGAA...AACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp AGGAGTGGGAAATCAACATGTCTTCTTTTCAGGGTCCTTTGGCTCATTTTAAATCATGCCAACCTTTGCTaGGATAGCCTGATATACTTG +
Preference number: 4 (lower is better)
Translates to: RSGKSTCLLFRVLWLILNHANLC*DSLIYL
Trigger: CAAGTATATCAGGCTATCGCAGCAAAGGTTGGCATG...ATTTAAAATGAGCCAAAGGACCCTGAAAAGAAGACATGTTGATTTCCCACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp CAGGAGAAAACCCAGATAAAATTCCCAGAGCCCAATGTTCTTTCTACTGTACTACTTCACATCATCGACTaGCTGATGAAAGAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: QEKTQIKFPEPNVLSTVLLHIID*LMKEVG
Trigger: ACCTACTTCTTTCATCAGGCAGTCGATGATGTGAAG...TAGTACAGTAGAAAGAACATTGGGCTCTGGGAATTTTATCTGGGTTTTCTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp CACCCTCTCGAAGCACTCATGCATGTAATTGAAATATGGCGTGAAGATTTTAACCTTCACATCATCGACTaGCTGATGAAAGAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: HPLEALMHVIEIWREDFNLHIID*LMKEVG
Trigger: ACCTACTTCTTTCATCAGGCAGTCGATGATGTGAAG...GTTAAAATCTTCACGCCATATTTCAATTACATGCATGAGTGCTTCGAGAGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR CCA 90 bp CGTTCAGTCTCCTTTCAATTAAAACTTGGGAGATCCAATCTAATCAACCATATTAAAGCCACTTTCGAATaGTCAAGCAGGTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RSVSFQLKLGRSNLINHIKATFE*SSRCLA
Trigger: TGCCAGGCACCTGCTTGACCATTCGAAAGTGGCTTT...AATATGGTTGATTAGATTGGATCTCCCAAGTTTTAATTGAAAGGAGACTGAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp AGGAGTGGGAAATCAACATGTCTTCTTTTCAGGGTCCTTTGGCTCATTTTAAATGTTATGGGTGGTTATTaGTCAGGAATGGAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: RSGKSTCLLFRVLWLILNVMGGY*SGMEEV
Trigger: TACCTCCTCCATTCCTGACCAATAACCACCCATAAC...ATTTAAAATGAGCCAAAGGACCCTGAAAAGAAGACATGTTGATTTCCCACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp GGAGAAAACCCAGATAAAATTCCCAGAGCCCAATGTTCTTTCTACTGTACTAAAATGTCCTGGCTCACATaGGATAATCAGTCTCTAACT +
Preference number: 4 (lower is better)
Translates to: GENPDKIPRAQCSFYCTKMSWLT*DNQSLT
Trigger: AGTTAGAGACTGATTATCTCATGTGAGCCAGGACAT...TTTAGTACAGTAGAAAGAACATTGGGCTCTGGGAATTTTATCTGGGTTTTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp AATGTAGAGTTTGTGAGGAAACTCATTAGGTGCCAATTTACGTACAAAGGAGTGATGTCCTGGCTCACATaGGATAATCAGTCTCTAACT +
Preference number: 4 (lower is better)
Translates to: NVEFVRKLIRCQFTYKGVMSWLT*DNQSLT
Trigger: AGTTAGAGACTGATTATCTCATGTGAGCCAGGACAT...CACTCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCTCACAAACTCTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR TCA 90 bp TGTTCTGATAATGAAAATGGCCACTTCCCTGGGAGTCGAGGAAATGTAAAGTTGCTTGACTTGACCTCCTaGTTCTTTCAAAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: CSDNENGHFPGSRGNVKLLDLTS*FFQRFS
Trigger: AGAAAATCTTTGAAAGAATCAGGAGGTCAAGTCAAG...CAACTTTACATTTCCTCGACTCCCAGGGAAGTGGCCATTTTCATTATCAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR TCA 90 bp AAGAAAGAGAGCACGAGGGAGGTCATGGATTCTAGTGAAAGGTGTGTAAAAACATTCATGTTCTTGACTTaGCCTCCTGATTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: KKESTREVMDSSERCVKTFMFLT*PPDSFK
Trigger: TTTGAAAGAATCAGGAGGTCAAGTCAAGAACATGAA...TGTTTTTACACACCTTTCACTAGAATCCATGACCTCCCTCGTGCTCTCTTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR TCA 90 bp AATTCCTGCATGATGTCACTCTCACCAATTACTCGTATTGAACACACTTTTTCTCACAGAAGAGAAAACTaGAAGCTAGGGAGGCTGATT +
Preference number: 4 (lower is better)
Translates to: NSCMMSLSPITRIEHTFSHRREN*KLGRLI
Trigger: AATCAGCCTCCCTAGCTTTCAGTTTTCTCTTCTGTG...AGAAAAAGTGTGTTCAATACGAGTAATTGGTGAGAGTGACATCATGCAGGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR TCA 90 bp CACATCTCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCTGGCCACATCTTTCTTaGTATAACTTCTCATCTAGA +
Preference number: 4 (lower is better)
Translates to: HISSYLETTPQTEAKKVCWPHLS*YNFSSR
Trigger: TCTAGATGAGAAGTTATATCAAGAAAGATGTGGCCA...GCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp CGTTCAGTCTCCTTTCAATTAAAACTTGGGAGATCCAATCTAATCAACCATATTCTCTATGGCAACCCATaGGCCGGAATCTATACTCAA +
Preference number: 4 (lower is better)
Translates to: RSVSFQLKLGRSNLINHILYGNP*AGIYTQ
Trigger: TTGAGTATAGATTCCGGCTCATGGGTTGCCATAGAG...AATATGGTTGATTAGATTGGATCTCCCAAGTTTTAATTGAAAGGAGACTGAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp GGAGAAAACCCAGATAAAATTCCCAGAGCCCAATGTTCTTTCTACTGTACTAAACTCATCCCATTCAAATaGAATTACCTGGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GENPDKIPRAQCSFYCTKLIPFK*NYLVLQ
Trigger: CTGGAGAACCAGGTAATTGCATTTGAATGGGATGAG...TTTAGTACAGTAGAAAGAACATTGGGCTCTGGGAATTTTATCTGGGTTTTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR GCA 90 bp AATGTAGAGTTTGTGAGGAAACTCATTAGGTGCCAATTTACGTACAAAGGAGTGCTCATCCCATTCAAATaGAATTACCTGGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: NVEFVRKLIRCQFTYKGVLIPFK*NYLVLQ
Trigger: CTGGAGAACCAGGTAATTGCATTTGAATGGGATGAG...CACTCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCTCACAAACTCTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR CCA 90 bp GGAGAAAACCCAGATAAAATTCCCAGAGCCCAATGTTCTTTCTACTGTACTAAATCAAATGCAATTACCTaGTTCTCCAGCTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GENPDKIPRAQCSFYCTKSNAIT*FSSCPS
Trigger: AGAAGGACAGCTGGAGAACCAGGTAATTGCATTTGA...TTTAGTACAGTAGAAAGAACATTGGGCTCTGGGAATTTTATCTGGGTTTTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp CAACACTGCTTAGTAGAATTGACTACAACCAATTATGACTGTCTCCCAGTTAGATGTGACCTCGCCATCTaGAAAATGTTCTCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: QHCLVELTTTNYDCLPVRCDLAI*KMFSFL
Trigger: GAGAAAAGAGAACATTTTCCAGATGGCGAGGTCACA...TCTAACTGGGAGACAGTCATAATTGGTTGTAGTCAATTCTACTAAGCAGTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458013.7
CDS-3UTR TCA 90 bp AATGTAGAGTTTGTGAGGAAACTCATTAGGTGCCAATTTACGTACAAAGGAGTGATAGGAATTCCTGCATaGTGTCACTCTCACCAATTA +
Preference number: 4 (lower is better)
Translates to: NVEFVRKLIRCQFTYKGVIGIPA*CHSHQL
Trigger: TAATTGGTGAGAGTGACATCATGCAGGAATTCCTAT...CACTCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCTCACAAACTCTACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR TCA 90 bp CAGGAGAAAACCCAGATAAAATTCCCAGAGCCCAATGTTCTTTCTACTGTACTATTACGTACAAAGGAGTaGCTGATCACTTCAAATAAG +
Preference number: 4 (lower is better)
Translates to: QEKTQIKFPEPNVLSTVLLRTKE*LITSNK
Trigger: CTTATTTGAAGTGATCAGTCACTCCTTTGTACGTAA...TAGTACAGTAGAAAGAACATTGGGCTCTGGGAATTTTATCTGGGTTTTCTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR TCA 90 bp GGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCTGTTTCACAGAAGAGAAATTCATGTTCTTGACTTaGCCTCCTGATTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: GTLDINYVVQSSCFTEEKFMFLT*PPDSFK
Trigger: TTTGAAAGAATCAGGAGGTCAAGTCAAGAACATGAA...TTTCTCTTCTGTGAAACAGGAAGACTGAACCACGTAATTAATATCCAAGGTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CCA 90 bp AGGAGTGGGAAATCAACATGTCTTCTTTTCAGGGTCCTTTGGCTCATTTTAAATAAGGGGAAAGAAAAGTaGCCTCACAATGATTTGCAA +
Preference number: 4 (lower is better)
Translates to: RSGKSTCLLFRVLWLILNKGKEK*PHNDLQ
Trigger: TTGCAAATCATTGTGAGGCCACTTTTCTTTCCCCTT...ATTTAAAATGAGCCAAAGGACCCTGAAAAGAAGACATGTTGATTTCCCACTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CCA 90 bp CGTTCAGTCTCCTTTCAATTAAAACTTGGGAGATCCAATCTAATCAACCATATTGAAACAGCAGTATGCTaGGGTCAACAGATCAAACAG +
Preference number: 4 (lower is better)
Translates to: RSVSFQLKLGRSNLINHIETAVC*GQQIKQ
Trigger: CTGTTTGATCTGTTGACCCCAGCATACTGCTGTTTC...AATATGGTTGATTAGATTGGATCTCCCAAGTTTTAATTGAAAGGAGACTGAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR TCA 90 bp CGTTCAGTCTCCTTTCAATTAAAACTTGGGAGATCCAATCTAATCAACCATATTTATCACTCCCCTCTTTaGTTCTATTCCTTACCACAG +
Preference number: 4 (lower is better)
Translates to: RSVSFQLKLGRSNLINHIYHSPL*FYSLPQ
Trigger: CTGTGGTAAGGAATAGAATCAAAGAGGGGAGTGATA...AATATGGTTGATTAGATTGGATCTCCCAAGTTTTAATTGAAAGGAGACTGAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR GCA 90 bp AATGTAGAGTTTGTGAGGAAACTCATTAGGTGCCAATTTACGTACAAAGGAGTGAGGAAACTCATTAGGTaGCAATTTACGTACAAAGGA +
Preference number: 4 (lower is better)
Translates to: NVEFVRKLIRCQFTYKGVRKLIR*QFTYKG
Trigger: TCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCT...CACTCCTTTGTACGTAAATTGGCACCTAATGAGTTTCCTCACAAACTCTACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR GCA 90 bp CAACACTGCTTAGTAGAATTGACTACAACCAATTATGACTGTCTCCCAGTTAGATTCCTAAATAAATTCTaGCAACAGGCCAACTACCTA +
Preference number: 4 (lower is better)
Translates to: QHCLVELTTTNYDCLPVRFLNKF*QQANYL
Trigger: TAGGTAGTTGGCCTGTTGGCAGAATTTATTTAGGAA...TCTAACTGGGAGACAGTCATAATTGGTTGTAGTCAATTCTACTAAGCAGTGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS TCA 90 bp GCAGCACGGCGCTCACATGCTGCAGCGGCGCGTACAGCTCCCCGTTaGTGCTCCGCAGTTGCCCGCCCTCGCTCACTTGGCCCCGCACGT +
Preference number: 5 (lower is better)
Translates to: AARRSHAAAARTAPR*CSAVARPRSLGPAR
Trigger: ACGTGCGGGGCCAAGTGAGCGAGGGCGGGCAACTGCGGAGCATCAACGGGGAGCTGTACGCGCCGCTGCAGCATGTGAGCGCCGTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368843.8
ENST00000458013.7
ENST00000642479.1
CDS-3UTR CAA 90 bp ATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCCACTGCAAGTTTCCCCAAAGGATGCGGTCCCCCTaGCGCACCCCGGCCCGATCG +
Preference number: 5 (lower is better)
Translates to: MGLSFGWHRPLTHCKFPQRMRSP*RTPARS
Trigger: CGATCGGGCCGGGGTGCGCAAGGGGGACCGCATCCT...TTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp ATGCTGATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGTCCTCGTCCGCCATCTaGCGAGCAGGCGAGCCGTAC +
Preference number: 5 (lower is better)
Translates to: MLMAVITCPFLLESQAQWSSSAI*RAGEPY
Trigger: GTACGGCTCGCCTGCTCGCAAGATGGCGGACGAGGA...CCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCATCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368841.7
CDS-3UTR CAA 90 bp GTCATGAGAGATGGAAGAGCCTGTAGCCAATGTCCACCCTCTAGACAAGGGAAGAGGATGCGGTCCCCCTaGCGCACCCCGGCCCGATCG +
Preference number: 5 (lower is better)
Translates to: VMRDGRACSQCPPSRQGKRMRSP*RTPARS
Trigger: CGATCGGGCCGGGGTGCGCAAGGGGGACCGCATCCT...CTTCCCTTGTCTAGAGGGTGGACATTGGCTACAGGCTCTTCCATCTCTCATGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CAA 90 bp TCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACTCCTCGTCCGCCATCTaGCGAGCAGGCGAGCCGTAC +
Preference number: 5 (lower is better)
Translates to: SPRKTARTHPVKTATTEDSSSAI*RAGEPY
Trigger: GTACGGCTCGCCTGCTCGCAAGATGGCGGACGAGGA...GTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000368843.8
CDS-3UTR CAA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCGTTGATGCTCCGCAGTaGCCCGCCCTCGCTCACTTG +
Preference number: 5 (lower is better)
Translates to: GNIVLPQLALASDPGMQLVDAPQ*PALAHL
Trigger: CAAGTGAGCGAGGGCGGGCAACTGCGGAGCATCAAC...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp ATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCCACTGCAAGTTTCCCCAATCCTTCCCCACCTCCTaGCTGCAGCTGGGTGCGTTG +
Preference number: 5 (lower is better)
Translates to: MGLSFGWHRPLTHCKFPQSFPTS*LQLGAL
Trigger: CAACGCACCCAGCTGCAGCAAGGAGGTGGGGAAGGA...TTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS GCA 90 bp GTCAAGATCAATTCCTTCTCGCCTGCTCGAATCAGGTCCACCACCTaGTTGTGTGTCGCCCCCTCAACATTCACGTGGTTCTTGGCCCCG +
Preference number: 5 (lower is better)
Translates to: VKINSFSPARIRSTT*LCVAPSTFTWFLAP
Trigger: CGGGGCCAAGAACCACGTGAATGTTGAGGGGGCGACACACAAGCAGGTGGTGGACCTGATTCGAGCAGGCGAGAAGGAATTGATCTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR CAA 90 bp GTCATGAGAGATGGAAGAGCCTGTAGCCAATGTCCACCCTCTAGACAAGGGAAGGTTGATGCTCCGCAGTaGCCCGCCCTCGCTCACTTG +
Preference number: 5 (lower is better)
Translates to: VMRDGRACSQCPPSRQGKVDAPQ*PALAHL
Trigger: CAAGTGAGCGAGGGCGGGCAACTGCGGAGCATCAAC...CTTCCCTTGTCTAGAGGGTGGACATTGGCTACAGGCTCTTCCATCTCTCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CAA 90 bp CACTGTCGTACTGTCCATGCCAACCTTTGCTGCGATAGCCTGATATACTTGGTCGCGTACAGCTCCCCGTaGATGCTCCGCAGTTGCCCG +
Preference number: 5 (lower is better)
Translates to: HCRTVHANLCCDSLIYLVAYSSP*MLRSCP
Trigger: CGGGCAACTGCGGAGCATCAACGGGGAGCTGTACGC...GACCAAGTATATCAGGCTATCGCAGCAAAGGTTGGCATGGACAGTACGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642479.1
CDS-3UTR CAA 90 bp CTTCACATCATCGACTGCCTGATGAAAGAAGTAGGTAACAGCAAGGTCATTGTCAGGATGCGGTCCCCCTaGCGCACCCCGGCCCGATCG +
Preference number: 5 (lower is better)
Translates to: LHIIDCLMKEVGNSKVIVRMRSP*RTPARS
Trigger: CGATCGGGCCGGGGTGCGCAAGGGGGACCGCATCCT...GACAATGACCTTGCTGTTACCTACTTCTTTCATCAGGCAGTCGATGATGTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642479.1
CDS-3UTR CAA 90 bp TGGGAGACCCCCTCTTCCCAGGGACAAATTGCAAAAGAAGTCTGGGTAGAAGCCAGGTCCACCACCTGCTaGTGTGTCGCCCCCTCAACA +
Preference number: 5 (lower is better)
Translates to: WETPSSQGQIAKEVWVEARSTTC*CVAPST
Trigger: TGTTGAGGGGGCGACACACAAGCAGGTGGTGGACCT...GGCTTCTACCCAGACTTCTTTTGCAATTTGTCCCTGGGAAGAGGGGGTCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTATCCTTCCCCACCTCCTaGCTGCAGCTGGGTGCGTTG +
Preference number: 5 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLSFPTS*LQLGAL
Trigger: CAACGCACCCAGCTGCAGCAAGGAGGTGGGGAAGGA...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS GCA 90 bp GTCAAGATCAATTCCTTCTCGCCTGCTCGAATCAGGTCCACCACCTaGTTGTGTGTCGCCCCCTCAACATTCACGTGGTTCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VKINSFSPARIRSTT*LCVAPSTFTWFTSR
Trigger: CCTGGAGGTGAACCACGTGAATGTTGAGGGGGCGACACACAAGCAGGTGGTGGACCTGATTCGAGCAGGCGAGAAGGAATTGATCTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368843.8
ENST00000458013.7
ENST00000642582.1
ENST00000643179.1
ENST00000643814.1
CDS-3UTR CAA 90 bp ATGGCTGTGATAACGTGCCCCTTCCTCCTGGAGTCACAGGCACAGTGGGGAAAGTCCTCTTTTCTCCACTaGAGCTCGCAGAACACCCTC +
Preference number: 5 (lower is better)
Translates to: MAVITCPFLLESQAQWGKSSFLH*SSQNTL
Trigger: GAGGGTGTTCTGCGAGCTCAAGTGGAGAAAAGAGGA...CTTTCCCCACTGTGCCTGTGACTCCAGGAGGAAGGGGCACGTTATCACAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368841.7
CDS-3UTR CAA 90 bp ACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTGGGGCTATCGTTTGGTaGGCACAGACCACTGACCCA +
Preference number: 5 (lower is better)
Translates to: TSLLQLGALLLGHFQKGCGAIVW*AQTTDP
Trigger: TGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCC...ACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp ACCCACTGCAAGTTTCCCCAAGGCCTTGAAGATACTATTGGATCCCTTCCCATCAGAAGGCGCTGTCCTTaGGGGTGCCCTCCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: THCKFPQGLEDTIGSLPIRRRCP*GCPPSP
Trigger: TGGGGAAGGAGGGCACCCCAAAGGACAGCGCCTTCT...GATGGGAAGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS GCA 90 bp GTCAAGATCAATTCCTTCTCGCCTGCTCGAATCAGGTCCACCACCTaGTTGTGTGTCGCCCCCTCAACATTCACGTGGTTCCTAAGGGGA +
Preference number: 5 (lower is better)
Translates to: VKINSFSPARIRSTT*LCVAPSTFTWFLRG
Trigger: TCCCCTTAGGAACCACGTGAATGTTGAGGGGGCGACACACAAGCAGGTGGTGGACCTGATTCGAGCAGGCGAGAAGGAATTGATCTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647328.1
CDS-3UTR CAA 90 bp GTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGATCCAGAGGCCAACCTaGCTGGAAGAATGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: VRLERLPGLIQSRRLQLRIQRPT*LEECPG
Trigger: GCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGAT...CCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp CACTGTCGTACTGTCCATGCCAACCTTTGCTGCGATAGCCTGATATACTTGGTCAGGTCCACCACCTGCTaGTGTGTCGCCCCCTCAACA +
Preference number: 5 (lower is better)
Translates to: HCRTVHANLCCDSLIYLVRSTTC*CVAPST
Trigger: TGTTGAGGGGGCGACACACAAGCAGGTGGTGGACCT...GACCAAGTATATCAGGCTATCGCAGCAAAGGTTGGCATGGACAGTACGACAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR CAA 90 bp ACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATAATCAGGTCCACCACCTGCTaGTGTGTCGCCCCCTCAACA +
Preference number: 5 (lower is better)
Translates to: TIQRPTLLEECPGSHEIIRSTTC*CVAPST
Trigger: TGTTGAGGGGGCGACACACAAGCAGGTGGTGGACCT...GATTATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp CACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTCCTCTTTTCTCCACTaGAGCTCGCAGAACACCCTC +
Preference number: 5 (lower is better)
Translates to: HLLAAAGCVVTGTLSKGLSSFLH*SSQNTL
Trigger: GAGGGTGTTCTGCGAGCTCAAGTGGAGAAAAGAGGA...CAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CAA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCAGGTTCTCAGCTGGCTaGGATGGGGCTATCGTTTGG +
Preference number: 5 (lower is better)
Translates to: GNIVLPQLALASDPGMQLRFSAG*DGAIVW
Trigger: CCAAACGATAGCCCCATCCAAGCCAGCTGAGAACCT...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp CGTGAAGATTTTAACCCATCGGGGCTTCTTCTCTCCTCGTGCATATTCGAAACAGTTGATGCTCCGCAGTaGCCCGCCCTCGCTCACTTG +
Preference number: 5 (lower is better)
Translates to: REDFNPSGLLLSSCIFETVDAPQ*PALAHL
Trigger: CAAGTGAGCGAGGGCGGGCAACTGCGGAGCATCAAC...TGTTTCGAATATGCACGAGGAGAGAAGAAGCCCCGATGGGTTAAAATCTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642479.1
CDS-3UTR CAA 90 bp ATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCCACTGCAAGTTTCCCCAACTCCAAGTGCTGGGTTaGGAGCTACAGGAAGGGATA +
Preference number: 5 (lower is better)
Translates to: MGLSFGWHRPLTHCKFPQLQVLG*ELQEGI
Trigger: TATCCCTTCCTGTAGCTCCAAACCCAGCACTTGGAG...TTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp AGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCAGCCCAGCCCAGAAGTaGGCAAATTCTGAGATAGGA +
Preference number: 5 (lower is better)
Translates to: REERLSSLIPYHAGANGCSPAQK*ANSEIG
Trigger: TCCTATCTCAGAATTTGCCAACTTCTGGGCTGGGCT...GCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp AGGTTCTCAGCTGGCTTGGATGGGGCTATCGTTTGGTTGGCACAGACCACTGACTTCTCTTTTCTCCACTaGAGCTCGCAGAACACCCTC +
Preference number: 5 (lower is better)
Translates to: RFSAGLDGAIVWLAQTTDFSFLH*SSQNTL
Trigger: GAGGGTGTTCTGCGAGCTCAAGTGGAGAAAAGAGAA...GTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458013.7
CDS-3UTR CAA 90 bp AAGAAAGAGAGCACGAGGGAGGTCATGGATTCTAGTGAAAGGTGTGTAAAAACATCCTCGTCCGCCATCTaGCGAGCAGGCGAGCCGTAC +
Preference number: 5 (lower is better)
Translates to: KKESTREVMDSSERCVKTSSSAI*RAGEPY
Trigger: GTACGGCTCGCCTGCTCGCAAGATGGCGGACGAGGA...TGTTTTTACACACCTTTCACTAGAATCCATGACCTCCCTCGTGCTCTCTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp TCCCACTCTGAGCGAGTAGGGGCAAATTGCTATTTTTACAGTTTGAACAAAGCTGCGTACAGCTCCCCGTaGATGCTCCGCAGTTGCCCG +
Preference number: 5 (lower is better)
Translates to: SHSERVGANCYFYSLNKAAYSSP*MLRSCP
Trigger: CGGGCAACTGCGGAGCATCAACGGGGAGCTGTACGC...AGCTTTGTTCAAACTGTAAAAATAGCAATTTGCCCCTACTCGCTCAGAGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp ACCTCTTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGAGGTCCACCACCTGCTaGTGTGTCGCCCCCTCAACA +
Preference number: 5 (lower is better)
Translates to: TSFSSPAPSWKIKKLYSLRSTTC*CVAPST
Trigger: TGTTGAGGGGGCGACACACAAGCAGGTGGTGGACCT...CAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAAGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp TCTACCCATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCAGGTTCTCAGCTGGCTaGGATGGGGCTATCGTTTGG +
Preference number: 5 (lower is better)
Translates to: STHSKGPPNPYVSCLKVSRFSAG*DGAIVW
Trigger: CCAAACGATAGCCCCATCCAAGCCAGCTGAGAACCT...GCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAATGGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp TCTCCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCTTCATCTGTGTCCCATACATTCACGTGGTTCTaGGCCCCGCACGTTGAAGCC +
Preference number: 5 (lower is better)
Translates to: SPRAYSKQKAIPSSSVSHTFTWF*APHVEA
Trigger: GGCTTCAACGTGCGGGGCCAAGAACCACGTGAATGT...ATGGGACACAGATGAAGAAGGGATGGCCTTCTGTTTCGAATATGCACGAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR CAA 90 bp CTGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACACATTCACGTGGTTCTaGGCCCCGCACGTTGAAGCC +
Preference number: 5 (lower is better)
Translates to: LAHTDSSKATANTFPHTNTFTWF*APHVEA
Trigger: GGCTTCAACGTGCGGGGCCAAGAACCACGTGAATGT...GTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR CAA 90 bp CTGCTTCATGCAAAGAAGGGCTTGATCCTATGGGATCCACGCAGCCACAGGGAATTCTGCTCCACATGTTaGTATCTGGGGACCGATATG +
Preference number: 5 (lower is better)
Translates to: LLHAKKGLILWDPRSHREFCSTC*YLGTDM
Trigger: CATATCGGTCCCCAGATACAAACATGTGGAGCAGAA...TTCCCTGTGGCTGCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp ACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCATCCAGAGGCCAACCTaGCTGGAAGAATGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: TANTFPHTNILGSPRKTAIQRPT*LEECPG
Trigger: GCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGAT...GGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp ATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAAGAAGCAGGGCTTTTTaGCACAGCCCGTTCACCATC +
Preference number: 5 (lower is better)
Translates to: ILGSPRKTARTHPVKTATRSRAF*HSPFTI
Trigger: GATGGTGAACGGGCTGTGCAAAAAAGCCCTGCTTCT...TGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp AGGGAGGAAAGGCTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCCTCCCCAGCACCCTCTaGGAAGATAAAGAAACTATA +
Preference number: 5 (lower is better)
Translates to: REERLSSLIPYHAGANGCLPSTL*EDKETI
Trigger: TATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAG...GCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTCCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp AAGAAAGAGAGCACGAGGGAGGTCATGGATTCTAGTGAAAGGTGTGTAAAAACAAGAAGGCGCTGTCCTTaGGGGTGCCCTCCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: KKESTREVMDSSERCVKTRRRCP*GCPPSP
Trigger: TGGGGAAGGAGGGCACCCCAAAGGACAGCGCCTTCT...TGTTTTTACACACCTTTCACTAGAATCCATGACCTCCCTCGTGCTCTCTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp CTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTTTCTGCTCCACATGTTaGTATCTGGGGACCGATATG +
Preference number: 5 (lower is better)
Translates to: LGSPRKTARTHPVKTATTFCSTC*YLGTDM
Trigger: CATATCGGTCCCCAGATACAAACATGTGGAGCAGAA...AGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp CTGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACAGAAGCAGGGCTTTTTaGCACAGCCCGTTCACCATC +
Preference number: 5 (lower is better)
Translates to: LAHTDSSKATANTFPHTNRSRAF*HSPFTI
Trigger: GATGGTGAACGGGCTGTGCAAAAAAGCCCTGCTTCT...GTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp CAACACTGCTTAGTAGAATTGACTACAACCAATTATGACTGTCTCCCAGTTAGAGCGTACAGCTCCCCGTaGATGCTCCGCAGTTGCCCG +
Preference number: 5 (lower is better)
Translates to: QHCLVELTTTNYDCLPVRAYSSP*MLRSCP
Trigger: CGGGCAACTGCGGAGCATCAACGGGGAGCTGTACGC...TCTAACTGGGAGACAGTCATAATTGGTTGTAGTCAATTCTACTAAGCAGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCCTCCCCAGCACCCTCTaGGAAGATAAAGAAACTATA +
Preference number: 5 (lower is better)
Translates to: GNIVLPQLALASDPGMQLLPSTL*EDKETI
Trigger: TATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAG...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp AGGTTCTCAGCTGGCTTGGATGGGGCTATCGTTTGGTTGGCACAGACCACTGACTACAGCCTGTTAACCTaGAGAAACACACCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: RFSAGLDGAIVWLAQTTDYSLLT*RNTPLS
Trigger: AGAAAGAGGTGTGTTTCTCAAGGTTAACAGGCTGTA...GTCAGTGGTCTGTGCCAACCAAACGATAGCCCCATCCAAGCCAGCTGAGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp CACATCTCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCCTGAGCCAGGGTCGGTaGAGGGAAAGCATACCGAGG +
Preference number: 5 (lower is better)
Translates to: HISSYLETTPQTEAKKVCLSQGR*RESIPR
Trigger: CCTCGGTATGCTTTCCCTCAACCGACCCTGGCTCAG...GCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CAA 90 bp GGATCCCTCTGCAACTTTACACATTCAGCATTCTCACGTTTTGTACTCTGTGATCTGAGCCAGGGTCGGTaGAGGGAAAGCATACCGAGG +
Preference number: 5 (lower is better)
Translates to: GSLCNFTHSAFSRFVLCDLSQGR*RESIPR
Trigger: CCTCGGTATGCTTTCCCTCAACCGACCCTGGCTCAG...ATCACAGAGTACAAAACGTGAGAATGCTGAATGTGTAAAGTTGCAGAGGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp ATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCCACTGCAAGTTTCCCCAAGCATCTGAGCCTGACTaGGTGCTTCTTATGCATTAT +
Preference number: 5 (lower is better)
Translates to: MGLSFGWHRPLTHCKFPQASEPD*VLLMHY
Trigger: ATAATGCATAAGAAGCACCAAGTCAGGCTCAGATGC...TTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp ACCTCCTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTGCATCTGAGCCTGACTaGGTGCTTCTTATGCATTAT +
Preference number: 5 (lower is better)
Translates to: TSLLQLGALLLGHFQKGCASEPD*VLLMHY
Trigger: ATAATGCATAAGAAGCACCAAGTCAGGCTCAGATGC...ACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp ACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATAATCAGCCCAGCCCAGAAGTaGGCAAATTCTGAGATAGGA +
Preference number: 5 (lower is better)
Translates to: TIQRPTLLEECPGSHEIISPAQK*ANSEIG
Trigger: TCCTATCTCAGAATTTGCCAACTTCTGGGCTGGGCT...GATTATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS TCA 90 bp ACACTCACTAACTTCTCAAGAGCAGGCATCTCAGGACTGTGCCTTTaGACTCCTGTCCCCAGTCATCCCATCTTCCAAACTCAGTCTAGA +
Preference number: 5 (lower is better)
Translates to: TLTNFSRAGISGLCL*TPVPSHPIFQTQSR
Trigger: TCTAGACTGAGTTTGGAAGATGGGATGACTGGGGACAGGAGTTCAAAGGCACAGTCCTGAGATGCCTGCTCTTGAGAAGTTAGTGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643179.1
CDS-3UTR CAA 90 bp CACATCTCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCGAGGGTCCCAGGTATTaGGCCACAGGCATATGGCGT +
Preference number: 5 (lower is better)
Translates to: HISSYLETTPQTEAKKVCEGPRY*ATGIWR
Trigger: ACGCCATATGCCTGTGGCCAAATACCTGGGACCCTC...GCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368838.2
CDS-3UTR CAA 90 bp TGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACAAGAAGCAGGGCTTTTTaGCACAGCCCGTTCACCATC +
Preference number: 5 (lower is better)
Translates to: WHIQTAVKQQQTPSLTQTRSRAF*HSPFTI
Trigger: GATGGTGAACGGGCTGTGCAAAAAAGCCCTGCTTCT...TGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp TGGGAGACCCCCTCTTCCCAGGGACAAATTGCAAAAGAAGTCTGGGTAGAAGCCTACAGCCTGTTAACCTaGAGAAACACACCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: WETPSSQGQIAKEVWVEAYSLLT*RNTPLS
Trigger: AGAAAGAGGTGTGTTTCTCAAGGTTAACAGGCTGTA...GGCTTCTACCCAGACTTCTTTTGCAATTTGTCCCTGGGAAGAGGGGGTCTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp CTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCCAGCATAACAAAAGTTATGGGTGGTTATaGGTCAGGAATGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: LSSLIPYHAGANGCQHNKSYGWL*VRNGGG
Trigger: ACCTCCTCCATTCCTGACCAATAACCACCCATAACT...TTTGTTATGCTGGCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp GCACTGGCACATACAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAGCCTTGAAGATACTATaGGATCCCTTCCCATCACTG +
Preference number: 5 (lower is better)
Translates to: ALAHTDSSKATANTFPHTALKIL*DPFPSL
Trigger: CAGTGATGGGAAGGGATCCAATAGTATCTTCAAGGC...TGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTGTATGTGCCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CAA 90 bp ACCCACTGCAAGTTTCCCCAAGGCCTTGAAGATACTATTGGATCCCTTCCCATCAGTTTCCCCAAGGCCTaGAAGATACTATTGGATCCC +
Preference number: 5 (lower is better)
Translates to: THCKFPQGLEDTIGSLPISFPKA*KILLDP
Trigger: GGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACT...GATGGGAAGGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACTTGCAGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp GGATCCCTCTGCAACTTTACACATTCAGCATTCTCACGTTTTGTACTCTGTGATGGGGCTATCGTTTGGTaGGCACAGACCACTGACCCA +
Preference number: 5 (lower is better)
Translates to: GSLCNFTHSAFSRFVLCDGAIVW*AQTTDP
Trigger: TGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCC...ATCACAGAGTACAAAACGTGAGAATGCTGAATGTGTAAAGTTGCAGAGGGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp ACCTCTTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGGAAAGGCTGTCCTCTTaGATCCCATACCATGCAGGG +
Preference number: 5 (lower is better)
Translates to: TSFSSPAPSWKIKKLYSLERLSS*IPYHAG
Trigger: CCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTC...CAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp ATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCCACTGCAAGTTTCCCCAACAGCATTCTCACGTTTaGTACTCTGTGATTTCACCT +
Preference number: 5 (lower is better)
Translates to: MGLSFGWHRPLTHCKFPQQHSHV*YSVISP
Trigger: AGGTGAAATCACAGAGTACAAAACGTGAGAATGCTG...TTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp GCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTTGTCAGTGCCCTATTTaGCTGCTCCAAGTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: ATANTFPHTNILGSPRKTCQCPI*LLQVLG
Trigger: ACCCAGCACTTGGAGCAGCAAAATAGGGCACTGACA...AGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CAA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTACGATATGGGCACTGCTaGCTTTTCTGTGTAATCATA +
Preference number: 5 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLRYGHC*LFCVII
Trigger: TATGATTACACAGAAAAGCAAGCAGTGCCCATATCG...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp CCATCGGGGCTTCTTCTCTCCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCCAAGTCCTTAGCATGTaGAGGTACATGACCATTTTT +
Preference number: 5 (lower is better)
Translates to: PSGLLLSSCIFETEGHPFQVLSM*RYMTIF
Trigger: AAAAATGGTCATGTACCTCAACATGCTAAGGACTTG...GAAGGGATGGCCTTCTGTTTCGAATATGCACGAGGAGAGAAGAAGCCCCGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR CAA 90 bp TCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGAGGACGATACCTTTGGCAAGTaGGTTGGGCTTATTTCTTTT +
Preference number: 5 (lower is better)
Translates to: SPRKTARTHPVKTATTEDDTFGK*VGLISF
Trigger: AAAAGAAATAAGCCCAACCAACTTGCCAAAGGTATC...GTCCTCAGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CAA 90 bp TTCACCATCCAGAGGCCAACCTTGCTGGAAGAATGTCCTGGCTCACATGAGATAAGGACAAAGATACCTTaGGCAAGTTGGTTGGGCTTA +
Preference number: 5 (lower is better)
Translates to: FTIQRPTLLEECPGSHEIRTKIP*ASWLGL
Trigger: TAAGCCCAACCAACTTGCCAAAGGTATCTTTGTCCT...TATCTCATGTGAGCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGATGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CAA 90 bp GGGAATATTGTCCTACCCCAATTAGCCCTGGCTTCTGATCCTGGGATGCAGCTCAAGAAACTATACTCCTaGTTCCTAGACTCTATGGCA +
Preference number: 5 (lower is better)
Translates to: GNIVLPQLALASDPGMQLKKLYS*FLDSMA
Trigger: TGCCATAGAGTCTAGGAACAAGGAGTATAGTTTCTT...GAGCTGCATCCCAGGATCAGAAGCCAGGGCTAATTGGGGTAGGACAATATTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp ATGGGGCTATCGTTTGGTTGGCACAGACCACTGACCCACTGCAAGTTTCCCCAAGCGAGTAGGGGCAAATaGCTATTTTTACAGTTTGAA +
Preference number: 5 (lower is better)
Translates to: MGLSFGWHRPLTHCKFPQASRGK*LFLQFE
Trigger: TTCAAACTGTAAAAATAGCAATTTGCCCCTACTCGC...TTGGGGAAACTTGCAGTGGGTCAGTGGTCTGTGCCAACCAAACGATAGCCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS TCA 90 bp GATAGGAAATTGCCAATTCCAGTCAGGCCTAAAGCAAAAACAGGATaGATCTGGGGGCTCCAGGATTCAAACAGGTTCGGATCTCAAGAC +
Preference number: 5 (lower is better)
Translates to: DRKLPIPVRPKAKTG*IWGLQDSNRFGSQD
Trigger: GTCTTGAGATCCGAACCTGTTTGAATCCTGGAGCCCCCAGATTCATCCTGTTTTTGCTTTAGGCCTGACTGGAATTGGCAATTTCCTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643179.1
CDS GCA 90 bp CTAGCTCCTTCTAGTGGTAACTACGAGCCAAGTGGGATAGGAAATTaGCAATTCCAGTCAGGCCTAAAGCAAAAACAGGATGAATCTGGG +
Preference number: 5 (lower is better)
Translates to: LAPSSGNYEPSGIGN*QFQSGLKQKQDESG
Trigger: CCCAGATTCATCCTGTTTTTGCTTTAGGCCTGACTGGAATTGGCAATTTCCTATCCCACTTGGCTCGTAGTTACCACTAGAAGGAGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643179.1
CDS-3UTR CAA 90 bp ACCTCTTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGTTCTGCTCCACATGTTaGTATCTGGGGACCGATATG +
Preference number: 5 (lower is better)
Translates to: TSFSSPAPSWKIKKLYSLFCSTC*YLGTDM
Trigger: CATATCGGTCCCCAGATACAAACATGTGGAGCAGAA...CAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp AGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCTTCTGCTCCACATGTTaGTATCTGGGGACCGATATG +
Preference number: 5 (lower is better)
Translates to: SLLEPEGTLDINYVVQSSFCSTC*YLGTDM
Trigger: CATATCGGTCCCCAGATACAAACATGTGGAGCAGAA...GGAAGACTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp CTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGTCAAGACGGCTACAACTGATAGCCTGATATACTaGGTCTGTAGTACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: LGSPRKTARTHPVKTATTDSLIY*VCSTVL
Trigger: AAGAACAGTACTACAGACCAAGTATATCAGGCTATC...AGTTGTAGCCGTCTTGACTGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp CCTCGTGCATATTCGAAACAGAAGGCCATCCCTTCTTCATCTGTGTCCCATCGCGATAGCCTGATATACTaGGTCTGTAGTACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: PRAYSKQKAIPSSSVSHRDSLIY*VCSTVL
Trigger: AAGAACAGTACTACAGACCAAGTATATCAGGCTATC...GCGATGGGACACAGATGAAGAAGGGATGGCCTTCTGTTTCGAATATGCACGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR CAA 90 bp TTTGTATCTGGGGACCGATATGGGCACTGCTTGCTTTTCTGTGTAATCATAAAAATCCAGAGGCCAACCTaGCTGGAAGAATGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: FVSGDRYGHCLLFCVIIKIQRPT*LEECPG
Trigger: GCCAGGACATTCTTCCAGCAAGGTTGGCCTCTGGAT...TTTTATGATTACACAGAAAAGCAAGCAGTGCCCATATCGGTCCCCAGATACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR CAA 90 bp TCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCCTGGATAGAAGCAGGGCTTTTTaGCACAGCCCGTTCACCATC +
Preference number: 5 (lower is better)
Translates to: SSYLETTPQTEAKKVCLDRSRAF*HSPFTI
Trigger: GATGGTGAACGGGCTGTGCAAAAAAGCCCTGCTTCT...ATCCAGGCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp CAGAAGCTAAAAAGGTATGCCTGGATGACTCAATCTGATTGGCCACATCTTTCTCCTGCCTTAACTCAGTaGACTTCTGGTGCTGACCGA +
Preference number: 5 (lower is better)
Translates to: QKLKRYAWMTQSDWPHLSPALTQ*TSGADR
Trigger: TCGGTCAGCACCAGAAGTCAACTGAGTTAAGGCAGG...AGAAAGATGTGGCCAATCAGATTGAGTCATCCAGGCATACCTTTTTAGCTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CAA 90 bp GGATCCCTCTGCAACTTTACACATTCAGCATTCTCACGTTTTGTACTCTGTGATCCTGCCTTAACTCAGTaGACTTCTGGTGCTGACCGA +
Preference number: 5 (lower is better)
Translates to: GSLCNFTHSAFSRFVLCDPALTQ*TSGADR
Trigger: TCGGTCAGCACCAGAAGTCAACTGAGTTAAGGCAGG...ATCACAGAGTACAAAACGTGAGAATGCTGAATGTGTAAAGTTGCAGAGGGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp CTTGCTGCAGCTGGGTGCGTTGTTACTGGGACACTTTCAAAAGGGCTGTTCCTAGATACCTTTGGCAAGTaGGTTGGGCTTATTTCTTTT +
Preference number: 5 (lower is better)
Translates to: LAAAGCVVTGTLSKGLFLDTFGK*VGLISF
Trigger: AAAAGAAATAAGCCCAACCAACTTGCCAAAGGTATC...TAGGAACAGCCCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp AGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCAGTTATGGGTGGTTATaGGTCAGGAATGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: SLLEPEGTLDINYVVQSSSYGWL*VRNGGG
Trigger: ACCTCCTCCATTCCTGACCAATAACCACCCATAACT...GGAAGACTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CAA 90 bp AAGAAAGAGAGCACGAGGGAGGTCATGGATTCTAGTGAAAGGTGTGTAAAAACACATGCAAAGAAGGGCTaGATCCTATGGGATCCACGC +
Preference number: 5 (lower is better)
Translates to: KKESTREVMDSSERCVKTHAKKG*ILWDPR
Trigger: GCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATG...TGTTTTTACACACCTTTCACTAGAATCCATGACCTCCCTCGTGCTCTCTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp GGATCCCTCTGCAACTTTACACATTCAGCATTCTCACGTTTTGTACTCTGTGATCATGCAAAGAAGGGCTaGATCCTATGGGATCCACGC +
Preference number: 5 (lower is better)
Translates to: GSLCNFTHSAFSRFVLCDHAKKG*ILWDPR
Trigger: GCGTGGATCCCATAGGATCAAGCCCTTCTTTGCATG...ATCACAGAGTACAAAACGTGAGAATGCTGAATGTGTAAAGTTGCAGAGGGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp AAGAAAGAGAGCACGAGGGAGGTCATGGATTCTAGTGAAAGGTGTGTAAAAACACTCCAAGTGCTGGGTTaGGAGCTACAGGAAGGGATA +
Preference number: 5 (lower is better)
Translates to: KKESTREVMDSSERCVKTLQVLG*ELQEGI
Trigger: TATCCCTTCCTGTAGCTCCAAACCCAGCACTTGGAG...TGTTTTTACACACCTTTCACTAGAATCCATGACCTCCCTCGTGCTCTCTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp CACATCTCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCACCTCTTTTCTCCACTaGAGCTCGCAGAACACCCTC +
Preference number: 5 (lower is better)
Translates to: HISSYLETTPQTEAKKVCTSFLH*SSQNTL
Trigger: GAGGGTGTTCTGCGAGCTCAAGTGGAGAAAAGAGGT...GCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGAGATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642349.1
CDS CCA 90 bp CTCAGTCTAGAGAAAAACCCTGACAAGTACCATAAAACCCAGGCCTaGTTCATCCACTATTCTCTAGCTCCTTCTAGTGGTAACTACGAG +
Preference number: 5 (lower is better)
Translates to: LSLEKNPDKYHKTQA*FIHYSLAPSSGNYE
Trigger: CTCGTAGTTACCACTAGAAGGAGCTAGAGAATAGTGGATGAACCAGGCCTGGGTTTTATGGTACTTGTCAGGGTTTTTCTCTAGACTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643179.1
CDS-3UTR CAA 90 bp TTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCACGATATGGGCACTGCTaGCTTTTCTGTGTAATCATA +
Preference number: 5 (lower is better)
Translates to: FPHTNILGSPRKTARTHPRYGHC*LFCVII
Trigger: TATGATTACACAGAAAAGCAAGCAGTGCCCATATCG...TGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp TCTACCCATTCTAAGGGGCCTCCAAATCCCTATGTCTCATGTCTGAAGGTCAGCAAGAAACTATACTCCTaGTTCCTAGACTCTATGGCA +
Preference number: 5 (lower is better)
Translates to: STHSKGPPNPYVSCLKVSKKLYS*FLDSMA
Trigger: TGCCATAGAGTCTAGGAACAAGGAGTATAGTTTCTT...GCTGACCTTCAGACATGAGACATAGGGATTTGGAGGCCCCTTAGAATGGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp GGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCTGTTTCACAGAAGAGAAAGAAAGGCTGTCCTCTTaGATCCCATACCATGCAGGG +
Preference number: 5 (lower is better)
Translates to: GTLDINYVVQSSCFTEEKERLSS*IPYHAG
Trigger: CCCTGCATGGTATGGGATCAAAGAGGACAGCCTTTC...TTTCTCTTCTGTGAAACAGGAAGACTGAACCACGTAATTAATATCCAAGGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS TCA 90 bp CAACTCTCCCAGGTTAAAACCAACCATTTCTTGAGGTGGAAGAGGTaGGGAAACAGAATGAGTGGACACCATGGAGTTAAGAATGTCAAG +
Preference number: 5 (lower is better)
Translates to: QLSQVKTNHFLRWKR*GNRMSGHHGVKNVK
Trigger: CTTGACATTCTTAACTCCATGGTGTCCACTCATTCTGTTTCCTCACCTCTTCCACCTCAAGAAATGGTTGGTTTTAACCTGGGAGAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644970.1
CDS-3UTR CAA 90 bp TTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCAGATAGCCTGATATACTaGGTCTGTAGTACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: FPHTNILGSPRKTARTHPDSLIY*VCSTVL
Trigger: AAGAACAGTACTACAGACCAAGTATATCAGGCTATC...TGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp TTCCCTCACACAAACATTCTTGGTTCGCCTAGAAAGACTGCCAGGACTCATCCACAAGTCCTTAGCATGTaGAGGTACATGACCATTTTT +
Preference number: 5 (lower is better)
Translates to: FPHTNILGSPRKTARTHPQVLSM*RYMTIF
Trigger: AAAAATGGTCATGTACCTCAACATGCTAAGGACTTG...TGGATGAGTCCTGGCAGTCTTTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp TCCTCTTATCTGGAGACAACTCCACAAACAGAAGCTAAAAAGGTATGCCTGGATAGTTTCCCCAAGGCCTaGAAGATACTATTGGATCCC +
Preference number: 5 (lower is better)
Translates to: SSYLETTPQTEAKKVCLDSFPKA*KILLDP
Trigger: GGGATCCAATAGTATCTTCAAGGCCTTGGGGAAACT...ATCCAGGCATACCTTTTTAGCTTCTGTTTGTGGAGTTGTCTCCAGATAAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CAA 90 bp CTGTCCTCTTTGATCCCATACCATGCAGGGGCAAATGGCTGCCAGCATAACAAACACTGCTTAGTAGAATaGACTACAACCAATTATGAC +
Preference number: 5 (lower is better)
Translates to: LSSLIPYHAGANGCQHNKHCLVE*TTTNYD
Trigger: GTCATAATTGGTTGTAGTCAATTCTACTAAGCAGTG...TTTGTTATGCTGGCAGCCATTTGCCCCTGCATGGTATGGGATCAAAGAGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp AGGAGTGGGAAATCAACATGTCTTCTTTTCAGGGTCCTTTGGCTCATTTTAAATTGTCAGTGCCCTATTTaGCTGCTCCAAGTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: RSGKSTCLLFRVLWLILNCQCPI*LLQVLG
Trigger: ACCCAGCACTTGGAGCAGCAAAATAGGGCACTGACA...ATTTAAAATGAGCCAAAGGACCCTGAAAAGAAGACATGTTGATTTCCCACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp ACCTCTTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGGTATCACTCCCCTCTTaGATTCTATTCCTTACCACA +
Preference number: 5 (lower is better)
Translates to: TSFSSPAPSWKIKKLYSLVSLPS*ILFLTT
Trigger: TGTGGTAAGGAATAGAATCAAAGAGGGGAGTGATAC...CAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp CAGACAGCAGTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGATATGGGCACTGCTaGCTTTTCTGTGTAATCATA +
Preference number: 5 (lower is better)
Translates to: QTAVKQQQTPSLTQTFLVRYGHC*LFCVII
Trigger: TATGATTACACAGAAAAGCAAGCAGTGCCCATATCG...AACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTACTGCTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp CTCATGCATGTAATTGAAATATGGCGTGAAGATTTTAACCCATCGGGGCTTCTTTTCTGCTCCACATGTTaGTATCTGGGGACCGATATG +
Preference number: 5 (lower is better)
Translates to: LMHVIEIWREDFNPSGLLFCSTC*YLGTDM
Trigger: CATATCGGTCCCCAGATACAAACATGTGGAGCAGAA...AAGAAGCCCCGATGGGTTAAAATCTTCACGCCATATTTCAATTACATGCATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS-3UTR CAA 90 bp AGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGTCTTCCGATAGCCTGATATACTaGGTCTGTAGTACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: SLLEPEGTLDINYVVQSSDSLIY*VCSTVL
Trigger: AAGAACAGTACTACAGACCAAGTATATCAGGCTATC...GGAAGACTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp TTTCTCAGGGTCTACATTTTCTCCTGGGCCATAAAAAGCTCTGAGCTTCTACCCGATAGCCTGATATACTaGGTCTGTAGTACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: FLRVYIFSWAIKSSELLPDSLIY*VCSTVL
Trigger: AAGAACAGTACTACAGACCAAGTATATCAGGCTATC...GGGTAGAAGCTCAGAGCTTTTTATGGCCCAGGAGAAAATGTAGACCCTGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp AAGAAAGAGAGCACGAGGGAGGTCATGGATTCTAGTGAAAGGTGTGTAAAAACAAGGACAAAGATACCTTaGGCAAGTTGGTTGGGCTTA +
Preference number: 5 (lower is better)
Translates to: KKESTREVMDSSERCVKTRTKIP*ASWLGL
Trigger: TAAGCCCAACCAACTTGCCAAAGGTATCTTTGTCCT...TGTTTTTACACACCTTTCACTAGAATCCATGACCTCCCTCGTGCTCTCTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp CAGAAGCTAAAAAGGTATGCCTGGATGACTCAATCTGATTGGCCACATCTTTCTCGATATGGGCACTGCTaGCTTTTCTGTGTAATCATA +
Preference number: 5 (lower is better)
Translates to: QKLKRYAWMTQSDWPHLSRYGHC*LFCVII
Trigger: TATGATTACACAGAAAAGCAAGCAGTGCCCATATCG...AGAAAGATGTGGCCAATCAGATTGAGTCATCCAGGCATACCTTTTTAGCTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp TTTCTCCTCCCCAGCACCCTCTTGGAAGATAAAGAAACTATACTCCTTGTTCCTCAAGTCCTTAGCATGTaGAGGTACATGACCATTTTT +
Preference number: 5 (lower is better)
Translates to: FLLPSTLLEDKETILLVPQVLSM*RYMTIF
Trigger: AAAAATGGTCATGTACCTCAACATGCTAAGGACTTG...AGGAACAAGGAGTATAGTTTCTTTATCTTCCAAGAGGGTGCTGGGGAGGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp TTTCTCAGGGTCTACATTTTCTCCTGGGCCATAAAAAGCTCTGAGCTTCTACCCCACTGCTTAGTAGAATaGACTACAACCAATTATGAC +
Preference number: 5 (lower is better)
Translates to: FLRVYIFSWAIKSSELLPHCLVE*TTTNYD
Trigger: GTCATAATTGGTTGTAGTCAATTCTACTAAGCAGTG...GGGTAGAAGCTCAGAGCTTTTTATGGCCCAGGAGAAAATGTAGACCCTGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp GTAAAGCAACAGCAAACACCTTCCCTCACACAAACATTCTTGGTTCGCCTAGAAGCGAGTAGGGGCAAATaGCTATTTTTACAGTTTGAA +
Preference number: 5 (lower is better)
Translates to: VKQQQTPSLTQTFLVRLEASRGK*LFLQFE
Trigger: TTCAAACTGTAAAAATAGCAATTTGCCCCTACTCGC...TTCTAGGCGAACCAAGAATGTTTGTGTGAGGGAAGGTGTTTGCTGTTGCTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CAA 90 bp AAGAGAAAACTGAAAGCTAGGGAGGCTGATTTACCCAAAATTACACAGAGGGAACGATATGGGCACTGCTaGCTTTTCTGTGTAATCATA +
Preference number: 5 (lower is better)
Translates to: KRKLKAREADLPKITQRERYGHC*LFCVII
Trigger: TATGATTACACAGAAAAGCAAGCAGTGCCCATATCG...TTCCCTCTGTGTAATTTTGGGTAAATCAGCCTCCCTAGCTTTCAGTTTTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp CAGAAGCTAAAAAGGTATGCCTGGATGACTCAATCTGATTGGCCACATCTTTCTCAAGTCCTTAGCATGTaGAGGTACATGACCATTTTT +
Preference number: 5 (lower is better)
Translates to: QKLKRYAWMTQSDWPHLSQVLSM*RYMTIF
Trigger: AAAAATGGTCATGTACCTCAACATGCTAAGGACTTG...AGAAAGATGTGGCCAATCAGATTGAGTCATCCAGGCATACCTTTTTAGCTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp AATCATAGCCTTTTAGAGCCGGAAGGGACCTTGGATATTAATTACGTGGTTCAGCAAGTCCTTAGCATGTaGAGGTACATGACCATTTTT +
Preference number: 5 (lower is better)
Translates to: NHSLLEPEGTLDINYVVQQVLSM*RYMTIF
Trigger: AAAAATGGTCATGTACCTCAACATGCTAAGGACTTG...CTGAACCACGTAATTAATATCCAAGGTCCCTTCCGGCTCTAAAAGGCTATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368838.2
ENST00000368841.7
ENST00000368843.8
ENST00000642349.1
CDS-3UTR CAA 90 bp CAGGAGAAAACCCAGATAAAATTCCCAGAGCCCAATGTTCTTTCTACTGTACTACAGCATTCTCACGTTTaGTACTCTGTGATTTCACCT +
Preference number: 5 (lower is better)
Translates to: QEKTQIKFPEPNVLSTVLQHSHV*YSVISP
Trigger: AGGTGAAATCACAGAGTACAAAACGTGAGAATGCTG...TAGTACAGTAGAAAGAACATTGGGCTCTGGGAATTTTATCTGGGTTTTCTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS-3UTR CAA 90 bp CGTTCAGTCTCCTTTCAATTAAAACTTGGGAGATCCAATCTAATCAACCATATTGCCTTGAAGATACTATaGGATCCCTTCCCATCACTG +
Preference number: 5 (lower is better)
Translates to: RSVSFQLKLGRSNLINHIALKIL*DPFPSL
Trigger: CAGTGATGGGAAGGGATCCAATAGTATCTTCAAGGC...AATATGGTTGATTAGATTGGATCTCCCAAGTTTTAATTGAAAGGAGACTGAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS-3UTR CAA 90 bp GGAGAAAACCCAGATAAAATTCCCAGAGCCCAATGTTCTTTCTACTGTACTAAAGTATCACTCCCCTCTTaGATTCTATTCCTTACCACA +
Preference number: 5 (lower is better)
Translates to: GENPDKIPRAQCSFYCTKVSLPS*ILFLTT
Trigger: TGTGGTAAGGAATAGAATCAAAGAGGGGAGTGATAC...TTTAGTACAGTAGAAAGAACATTGGGCTCTGGGAATTTTATCTGGGTTTTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368843.8
CDS TCA 90 bp AGAGATATTCACCTACCTCATCGGATTCTGATAGGAATTCCTGCATaGTGTCACTCTCACCAATTACTCGTATTGAACACACTTTTTCTA +
Preference number: 5 (lower is better)
Translates to: RDIHLPHRILIGIPA*CHSHQLLVLNTLFL
Trigger: TAGAAAAAGTGTGTTCAATACGAGTAATTGGTGAGAGTGACATCATGCAGGAATTCCTATCAGAATCCGATGAGGTAGGTGAATATCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643845.1
CDS TCA 90 bp AAACAAAACTTAGTATCAGCCACTGGTACTTACCAAAGGAGTGACTaGTCACTTCAAATAAGGCAAAGTAATTCACTGTCGTACTGTCCA +
Preference number: 5 (lower is better)
Translates to: KQNLVSATGTYQRSD*SLQIRQSNSLSYCP
Trigger: TGGACAGTACGACAGTGAATTACTTTGCCTTATTTGAAGTGATCAGTCACTCCTTTGGTAAGTACCAGTGGCTGATACTAAGTTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643814.1
CDS-3UTR CAA 90 bp AATTCCTGCATGATGTCACTCTCACCAATTACTCGTATTGAACACACTTTTTCTGATAGCCTGATATACTaGGTCTGTAGTACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: NSCMMSLSPITRIEHTFSDSLIY*VCSTVL
Trigger: AAGAACAGTACTACAGACCAAGTATATCAGGCTATC...AGAAAAAGTGTGTTCAATACGAGTAATTGGTGAGAGTGACATCATGCAGGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368841.7
ENST00000642349.1
ENST00000642479.1
CDS-3UTR CAA 90 bp CGTTCAGTCTCCTTTCAATTAAAACTTGGGAGATCCAATCTAATCAACCATATTCAAGTCCTTAGCATGTaGAGGTACATGACCATTTTT +
Preference number: 5 (lower is better)
Translates to: RSVSFQLKLGRSNLINHIQVLSM*RYMTIF
Trigger: AAAAATGGTCATGTACCTCAACATGCTAAGGACTTG...AATATGGTTGATTAGATTGGATCTCCCAAGTTTTAATTGAAAGGAGACTGAACG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368843.8
ENST00000458013.7
CDS TCA 90 bp CCTTACAAATATTATAATTTGACTATATTAAGGGGATGGGAGAGATaGAAAAGGTATGGGTATATGGTAGGAATGGAGAAGGAAAGACAG +
Preference number: 5 (lower is better)
Translates to: PYKYYNLTILRGWER*KRYGYMVGMEKERQ
Trigger: CTGTCTTTCCTTCTCCATTCCTACCATATACCCATACCTTTTTCATCTCTCCCATCCCCTTAATATAGTCAAATTATAATATTTGTAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482791.2
CDS GCA 72 bp GATCCGCCGGCCGCGGGACCGACTCGGCCACCGAGCTaGTGGCGCGGGGTGAAGAGGAGGCAGGGGGCGGGC +
Preference number: 6 (lower is better)
Translates to: DPPAAGPTRPPS*WRGVKRRQGAG
Trigger: GCCCGCCCCCTGCCTCCTCTTCACCCCGCGCCAGCAGCTCGGTGGCCGAGTCGGTCCCGCGGCCGGCGGATC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642376.1
CDS CAA 90 bp GGCAGCACGGCGCTCACATGCTGCAGCGGCGCGTACAGCTCCCCGTaGATGCTCCGCAGTTGCCCGCCCTCGCTCACTTGGCCCCGCACG +
Preference number: 6 (lower is better)
Translates to: GSTALTCCSGAYSSP*MLRSCPPSLTWPRT
Trigger: CGTGCGGGGCCAAGTGAGCGAGGGCGGGCAACTGCGGAGCATCAACGGGGAGCTGTACGCGCCGCTGCAGCATGTGAGCGCCGTGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368843.8
ENST00000458013.7
ENST00000642479.1
CDS CAA 90 bp CACATGCTGCAGCGGCGCGTACAGCTCCCCGTTGATGCTCCGCAGTaGCCCGCCCTCGCTCACTTGGCCCCGCACGTTGAAGCCGTAGCC +
Preference number: 6 (lower is better)
Translates to: HMLQRRVQLPVDAPQ*PALAHLAPHVEAVA
Trigger: GGCTACGGCTTCAACGTGCGGGGCCAAGTGAGCGAGGGCGGGCAACTGCGGAGCATCAACGGGGAGCTGTACGCGCCGCTGCAGCATGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368843.8
ENST00000458013.7
ENST00000642479.1
CDS TCA 72 bp CGCTCACATGCTGCAGCGGCGCGTACAGCTCCCCGTTaGTGCTCCGCAGTTGCCCGCCCTCGCTCACTTGGC +
Preference number: 6 (lower is better)
Translates to: RSHAAAARTAPR*CSAVARPRSLG
Trigger: GCCAAGTGAGCGAGGGCGGGCAACTGCGGAGCATCAACGGGGAGCTGTACGCGCCGCTGCAGCATGTGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368843.8
ENST00000458013.7
ENST00000642479.1
CDS GCA 72 bp AGCGGCGCGTACAGCTCCCCGTTGATGCTCCGCAGTTaGCCGCCCTCGCTCACTTGGCCCCGCACGTTGAAG +
Preference number: 6 (lower is better)
Translates to: SGAYSSPLMLRS*PPSLTWPRTLK
Trigger: CTTCAACGTGCGGGGCCAAGTGAGCGAGGGCGGGCAACTGCGGAGCATCAACGGGGAGCTGTACGCGCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368843.8
ENST00000458013.7
ENST00000642479.1
CDS CAA 72 bp CCCGTTGATGCTCCGCAGTTGCCCGCCCTCGCTCACTaGGCCCCGCACGTTGAAGCCGTAGCCGGACTCGGA +
Preference number: 6 (lower is better)
Translates to: PVDAPQLPALAH*APHVEAVAGLG
Trigger: TCCGAGTCCGGCTACGGCTTCAACGTGCGGGGCCAAGTGAGCGAGGGCGGGCAACTGCGGAGCATCAACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368843.8
ENST00000458013.7
ENST00000642479.1
CDS CAA 72 bp CAGCGGCGCGTACAGCTCCCCGTTGATGCTCCGCAGTaGCCCGCCCTCGCTCACTTGGCCCCGCACGTTGAA +
Preference number: 6 (lower is better)
Translates to: QRRVQLPVDAPQ*PALAHLAPHVE
Trigger: TTCAACGTGCGGGGCCAAGTGAGCGAGGGCGGGCAACTGCGGAGCATCAACGGGGAGCTGTACGCGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368843.8
ENST00000458013.7
ENST00000642479.1
CDS CAA 72 bp GCGCTCACATGCTGCAGCGGCGCGTACAGCTCCCCGTaGATGCTCCGCAGTTGCCCGCCCTCGCTCACTTGG +
Preference number: 6 (lower is better)
Translates to: ALTCCSGAYSSP*MLRSCPPSLTW
Trigger: CCAAGTGAGCGAGGGCGGGCAACTGCGGAGCATCAACGGGGAGCTGTACGCGCCGCTGCAGCATGTGAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368843.8
ENST00000458013.7
ENST00000642479.1
CDS CAA 90 bp GTACAGCTCCCCGTTGATGCTCCGCAGTTGCCCGCCCTCGCTCACTaGGCCCCGCACGTTGAAGCCGTAGCCGGACTCGGACTTGACGAT +
Preference number: 6 (lower is better)
Translates to: VQLPVDAPQLPALAH*APHVEAVAGLGLDD
Trigger: ATCGTCAAGTCCGAGTCCGGCTACGGCTTCAACGTGCGGGGCCAAGTGAGCGAGGGCGGGCAACTGCGGAGCATCAACGGGGAGCTGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368843.8
ENST00000458013.7
ENST00000642479.1
CDS CAA 90 bp AAGATCAATTCCTTCTCGCCTGCTCGAATCAGGTCCACCACCTGCTaGTGTGTCGCCCCCTCAACATTCACGTGGTTCTTGGCCCCGCAC +
Preference number: 6 (lower is better)
Translates to: KINSFSPARIRSTTC*CVAPSTFTWFLAPH
Trigger: GTGCGGGGCCAAGAACCACGTGAATGTTGAGGGGGCGACACACAAGCAGGTGGTGGACCTGATTCGAGCAGGCGAGAAGGAATTGATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS CAA 72 bp TCCTTCTCGCCTGCTCGAATCAGGTCCACCACCTGCTaGTGTGTCGCCCCCTCAACATTCACGTGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: SFSPARIRSTTC*CVAPSTFTWFL
Trigger: CAAGAACCACGTGAATGTTGAGGGGGCGACACACAAGCAGGTGGTGGACCTGATTCGAGCAGGCGAGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368841.7
ENST00000642349.1
CDS CAA 72 bp TCCTTCTCGCCTGCTCGAATCAGGTCCACCACCTGCTaGTGTGTCGCCCCCTCAACATTCACGTGGTTCCTA +
Preference number: 6 (lower is better)
Translates to: SFSPARIRSTTC*CVAPSTFTWFL
Trigger: TAGGAACCACGTGAATGTTGAGGGGGCGACACACAAGCAGGTGGTGGACCTGATTCGAGCAGGCGAGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647328.1
CDS GCA 72 bp AATTCCTTCTCGCCTGCTCGAATCAGGTCCACCACCTaGTTGTGTGTCGCCCCCTCAACATTCACGTGGTTC +
Preference number: 6 (lower is better)
Translates to: NSFSPARIRSTT*LCVAPSTFTWF
Trigger: GAACCACGTGAATGTTGAGGGGGCGACACACAAGCAGGTGGTGGACCTGATTCGAGCAGGCGAGAAGGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000368841.7
ENST00000368843.8
ENST00000458013.7
ENST00000642349.1
ENST00000642582.1
ENST00000643179.1
ENST00000643814.1
ENST00000647328.1
CDS CAA 90 bp AAGATCAATTCCTTCTCGCCTGCTCGAATCAGGTCCACCACCTGCTaGTGTGTCGCCCCCTCAACATTCACGTGGTTCCTAAGGGGAAAA +
Preference number: 6 (lower is better)
Translates to: KINSFSPARIRSTTC*CVAPSTFTWFLRGK
Trigger: TTTTCCCCTTAGGAACCACGTGAATGTTGAGGGGGCGACACACAAGCAGGTGGTGGACCTGATTCGAGCAGGCGAGAAGGAATTGATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647328.1
CDS TCA 72 bp GATAAGGAAAGGCTAGGTGGCCACATCTCTCTGCTGTaGCCTCGCCATCTGGAAAATGTTCTCTTTTCTCCA +
Preference number: 6 (lower is better)
Translates to: DKERLGGHISLL*PRHLENVLFSP
Trigger: TGGAGAAAAGAGAACATTTTCCAGATGGCGAGGTCACAGCAGAGAGATGTGGCCACCTAGCCTTTCCTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458013.7
ENST00000647551.1
CDS TCA 72 bp GGTCTCTTCCCTGAGCCAGAAGATGAGCTATCTTATTaGGGAGATCTGTGTCATTTCCCTGCCTTCCTAGAC +
Preference number: 6 (lower is better)
Translates to: GLFPEPEDELSY*GDLCHFPAFLD
Trigger: GTCTAGGAAGGCAGGGAAATGACACAGATCTCCTCAATAAGATAGCTCATCTTCTGGCTCAGGGAAGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642582.1
CDS TCA 72 bp ACTGTAGTGCCAGCTAGTTTTATACTTCAAAAAGGCTaGGGCATAAGAGTCATTGGAACCCAGGAGGCACGG +
Preference number: 6 (lower is better)
Translates to: TVVPASFILQKG*GIRVIGTQEAR
Trigger: CCGTGCCTCCTGGGTTCCAATGACTCTTATGCCTCAGCCTTTTTGAAGTATAAAACTAGCTGGCACTACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647551.1
CDS CCA 72 bp GATGAAAACTCATCAGGGATGGTTTCAAAGAGAAAGTaGGCCTGGCACTTCAAAGAGAAAGTGGACCTAGGT +
Preference number: 6 (lower is better)
Translates to: DENSSGMVSKRK*AWHFKEKVDLG
Trigger: ACCTAGGTCCACTTTCTCTTTGAAGTGCCAGGCCCACTTTCTCTTTGAAACCATCCCTGATGAGTTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643845.1
CDS CCA 72 bp GAGAAAAACCCTGACAAGTACCATAAAACCCAGGCCTaGTTCATCCACTATTCTCTAGCTCCTTCTAGTGGT +
Preference number: 6 (lower is better)
Translates to: EKNPDKYHKTQA*FIHYSLAPSSG
Trigger: ACCACTAGAAGGAGCTAGAGAATAGTGGATGAACCAGGCCTGGGTTTTATGGTACTTGTCAGGGTTTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643179.1
CDS TCA 72 bp CAGGTTAAAACCAACCATTTCTTGAGGTGGAAGAGGTaGGGAAACAGAATGAGTGGACACCATGGAGTTAAG +
Preference number: 6 (lower is better)
Translates to: QVKTNHFLRWKR*GNRMSGHHGVK
Trigger: CTTAACTCCATGGTGTCCACTCATTCTGTTTCCTCACCTCTTCCACCTCAAGAAATGGTTGGTTTTAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644970.1
CDS CCA 72 bp ATGCTTGGTCTGATTGTTAGAGACAGTTCTAATGAGTaGGATCTCCCCTTGTCTTCAAGCTCTTCTCTAGGT +
Preference number: 6 (lower is better)
Translates to: MLGLIVRDSSNE*DLPLSSSSSLG
Trigger: ACCTAGAGAAGAGCTTGAAGACAAGGGGAGATCCCACTCATTAGAACTGTCTCTAACAATCAGACCAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643814.1
CDS CCA 72 bp AGCACCTACAACATGCTTGATGCTGTGGTAAGGCACTaGGAATATAAAGATGGTCAAGATTTAGCTCTTACC +
Preference number: 6 (lower is better)
Translates to: STYNMLDAVVRH*EYKDGQDLALT
Trigger: GGTAAGAGCTAAATCTTGACCATCTTTATATTCCCAGTGCCTTACCACAGCATCAAGCATGTTGTAGGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643845.1
CDS CAA 90 bp CTTGGTCTGATTGTTAGAGACAGTTCTAATGAGTGGGATCTCCCCTaGTCTTCAAGCTCTTCTCTAGGTAAATGTTTCTTTCTCATAGTA +
Preference number: 6 (lower is better)
Translates to: LGLIVRDSSNEWDLP*SSSSSLGKCFFLIV
Trigger: TACTATGAGAAAGAAACATTTACCTAGAGAAGAGCTTGAAGACAAGGGGAGATCCCACTCATTAGAACTGTCTCTAACAATCAGACCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643814.1
CDS CCA 72 bp CAAGGCAACCTAAATCTACCAAACTCTCCCCCTTTCTaGGATAAGGAAGGTCTAATCAACCAATATTATCTA +
Preference number: 6 (lower is better)
Translates to: QGNLNLPNSPPF*DKEGLINQYYL
Trigger: TAGATAATATTGGTTGATTAGACCTTCCTTATCCCAGAAAGGGGGAGAGTTTGGTAGATTTAGGTTGCCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643814.1
CDS CAA 72 bp ATTGTTAGAGACAGTTCTAATGAGTGGGATCTCCCCTaGTCTTCAAGCTCTTCTCTAGGTAAATGTTTCTTT +
Preference number: 6 (lower is better)
Translates to: IVRDSSNEWDLP*SSSSSLGKCFF
Trigger: AAAGAAACATTTACCTAGAGAAGAGCTTGAAGACAAGGGGAGATCCCACTCATTAGAACTGTCTCTAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643814.1
CDS CAA 90 bp CATCCAATGTCAAGTCTACGTGTTCATTTAATTTACCTGATATACTaGGTCTGTAGTACTGTTCTTTTTAACCCTGACTGTAACCGTTGT +
Preference number: 6 (lower is better)
Translates to: HPMSSLRVHLIYLIY*VCSTVLFNPDCNRC
Trigger: ACAACGGTTACAGTCAGGGTTAAAAAGAACAGTACTACAGACCAAGTATATCAGGTAAATTAAATGAACACGTAGACTTGACATTGGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647454.1
CDS TCA 72 bp GCAGTTCCTCAAGAAGTTGAAAATAGAACTGCCATATaGTTCAGTAATCCCACTTCTGGGTATATTGAAAAA +
Preference number: 6 (lower is better)
Translates to: AVPQEVENRTAI*FSNPTSGYIEK
Trigger: TTTTTCAATATACCCAGAAGTGGGATTACTGAATCATATGGCAGTTCTATTTTCAACTTCTTGAGGAACTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647551.1