Pregenerated sensors for SNX16 (Homo sapiens)
Ensembl gene IDs: ENSG00000104497Ensembl transcript IDs: ENST00000345957.9, ENST00000353788.8, ENST00000396330.6, ENST00000518183.5, ENST00000519119.5, ENST00000519212.1, ENST00000519817.5, ENST00000520618.5, ENST00000521773.5, ENST00000521810.5, ENST00000615066.1
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACAGAAAGCATACCGACTaGGATTGCAAAATGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: QKARLKKWLVRFRTDRQHRKHTD*DCKMPA Trigger: TGCTGGCATTTTGCAATCCCAGTCGGTATGCTTTCT...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| 3UTR-3UTR GCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACACTGGGATTGCAAAATaGCAGCATGATTACAATGCT | + |
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Preference number: 2 (lower is better) Translates to: QKARLKKWLVRFRTDRQHTGIAK*QHDYNA Trigger: AGCATTGTAATCATGCTGGCATTTTGCAATCCCAGT...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| 3UTR-3UTR TCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACCATACCTGTGCACTTTaGCAGACTAAAAATTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: QKARLKKWLVRFRTDRQHHTCAL*QTKNFW Trigger: CCAAAAATTTTTAGTCTGTCAAAGTGCACAGGTATG...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| 3UTR-3UTR CAA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACTTAAGAATGTGGGCCTaGATAACAGAATTCCAACAA | + |
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Preference number: 3 (lower is better) Translates to: QKARLKKWLVRFRTDRQHLRMWA*ITEFQQ Trigger: TTGTTGGAATTCTGTTATCAAGGCCCACATTCTTAA...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| 3UTR-3UTR CAA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACAGCCAGTTAGGAACTTaGCAGTATATATGGCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: QKARLKKWLVRFRTDRQHSQLGT*QYIWLF Trigger: AAAAAGCCATATATACTGCAAAGTTCCTAACTGGCT...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| 3UTR CCA 72 bp | TTAAATACAATCTTCCAAAAAGCCAGATTGAAAAAGTaGCTGGTTCGCTTTAGAACAGACAGGCAACACTAT | + |
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Preference number: 3 (lower is better) Translates to: LNTIFQKARLKK*LVRFRTDRQHY Trigger: ATAGTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTGGAAGATTGTATTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| 3UTR-3UTR CAA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTTTAAGAATGTGGGCCTaGATAACAGAATTCCAACAA | + |
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Preference number: 3 (lower is better) Translates to: LKEANSLNLGRDKDYVETLRMWA*ITEFQQ Trigger: TTGTTGGAATTCTGTTATCAAGGCCCACATTCTTAA...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR TCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACGAGCGCGCTTCCCGGTaGCGGTTAAACCGGACTCTC | + |
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Preference number: 4 (lower is better) Translates to: QKARLKKWLVRFRTDRQHERASR*RLNRTL Trigger: GAGAGTCCGGTTTAACCGTCACCGGGAAGCGCGCTC...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR TCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTGAGCGCGCTTCCCGGTaGCGGTTAAACCGGACTCTC | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETERASR*RLNRTL Trigger: GAGAGTCCGGTTTAACCGTCACCGGGAAGCGCGCTC...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR TCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACCCATGCTTATCATCTTaGCAGTACTCAGCCCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QKARLKKWLVRFRTDRQHPCLSS*QYSAPS Trigger: CGAGGGGGCTGAGTACTGTCAAGATGATAAGCATGG...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000396330.6 |
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| CDS-3UTR TCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACAAGCTTGCACACTGTTaGGTCCACTTAGAGAACAAC | + |
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Preference number: 4 (lower is better) Translates to: QKARLKKWLVRFRTDRQHKLAHC*VHLENN Trigger: GTTGTTCTCTAAGTGGACTCAACAGTGTGCAAGCTT...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACGTTGCCATCTTCTTTTaGCTTTTCCAACAAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: QKARLKKWLVRFRTDRQHVAIFF*LFQQAC Trigger: GCAAGCTTGTTGGAAAAGCCAAAAGAAGATGGCAAC...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACGCCAGATTGAAAAAGTaGCTGGTTCGCTTTAGAACA | + |
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Preference number: 4 (lower is better) Translates to: QKARLKKWLVRFRTDRQHARLKK*LVRFRT Trigger: TGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGC...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR TCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACGAAGTTGCTTCTCACTaGGCAGTTTCTTTAGTGATT | + |
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Preference number: 4 (lower is better) Translates to: QKARLKKWLVRFRTDRQHEVASH*AVSLVI Trigger: AATCACTAAAGAAACTGCTCAGTGAGAAGCAACTTC...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR TCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACTCTAAAGTGTCTATATaGAGTTGCTTCTCACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: QKARLKKWLVRFRTDRQHSKVSI*SCFSLS Trigger: GCTCAGTGAGAAGCAACTTCATATAGACACTTTAGA...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR GCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACTGGGACATAAGGAGTTaGCATCTTCTTTTGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QKARLKKWLVRFRTDRQHWDIRS*HLLLAF Trigger: AAAAGCCAAAAGAAGATGGCAACTCCTTATGTCCCA...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR GCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACAAGAAATTCTCTCACTaGAAGGCAGTTAGCAATGTC | + |
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Preference number: 4 (lower is better) Translates to: QKARLKKWLVRFRTDRQHKKFSH*KAVSNV Trigger: GACATTGCTAACTGCCTTGCAGTGAGAGAATTTCTT...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR GCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACTTTCACAGAATGCCCTaGTTTCTTCTAGGCTATCAA | + |
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Preference number: 4 (lower is better) Translates to: QKARLKKWLVRFRTDRQHFHRMP*FLLGYQ Trigger: TTGATAGCCTAGAAGAAAGCAGGGCATTCTGTGAAA...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACATCAAATGGACCCGGTaGATCATCCAAACAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QKARLKKWLVRFRTDRQHIKWTR*IIQTKK Trigger: TTTCTTTGTTTGGATGATCCACCGGGTCCATTTGAT...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR TCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACACTGCTACAGACAGATaGAGTATTATCCATTTGATC | + |
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Preference number: 4 (lower is better) Translates to: QKARLKKWLVRFRTDRQHTATDR*SIIHLI Trigger: GATCAAATGGATAATACTTCATCTGTCTGTAGCAGT...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR TCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTCTCATCCAGACATCTTaGTCAACCTCAAGTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETLIQTS*STSSAE Trigger: CTCTGCACTTGAGGTTGATCAAGATGTCTGGATGAG...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615066.1 |
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| CDS-3UTR GCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACAGCTTGTTGAGACACTaGCAAAAGAAGAACTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: QKARLKKWLVRFRTDRQHSLLRH*QKKNFF Trigger: AAAGAAGTTCTTCTTTTGGCAGTGTCTCAACAAGCT...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACTTTGAGTCTTCTAACTaGCCCTTAGAAGAATTTGAG | + |
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Preference number: 4 (lower is better) Translates to: QKARLKKWLVRFRTDRQHFESSN*PLEEFE Trigger: CTCAAATTCTTCTAAGGGCCAGTTAGAAGACTCAAA...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CCA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACTATAGTAGGTGTAGATaGTCTATCTTCCCAATTCAC | + |
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Preference number: 4 (lower is better) Translates to: QKARLKKWLVRFRTDRQHYSRCR*SIFPIH Trigger: GTGAATTGGGAAGATAGACCATCTACACCTACTATA...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR TCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTAAGCTTGCACACTGTTaGGTCCACTTAGAGAACAAC | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETKLAHC*VHLENN Trigger: GTTGTTCTCTAAGTGGACTCAACAGTGTGCAAGCTT...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR CCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTAGAAAGCATACCGACTaGGATTGCAAAATGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETRKHTD*DCKMPA Trigger: TGCTGGCATTTTGCAATCCCAGTCGGTATGCTTTCT...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTGTTGCCATCTTCTTTTaGCTTTTCCAACAAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETVAIFF*LFQQAC Trigger: GCAAGCTTGTTGGAAAAGCCAAAAGAAGATGGCAAC...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR CCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTGCCAGATTGAAAAAGTaGCTGGTTCGCTTTAGAACA | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETARLKK*LVRFRT Trigger: TGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGC...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR TCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTGAAGTTGCTTCTCACTaGGCAGTTTCTTTAGTGATT | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETEVASH*AVSLVI Trigger: AATCACTAAAGAAACTGCTCAGTGAGAAGCAACTTC...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR TCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTTCTAAAGTGTCTATATaGAGTTGCTTCTCACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETSKVSI*SCFSLS Trigger: GCTCAGTGAGAAGCAACTTCATATAGACACTTTAGA...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR GCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTTGGGACATAAGGAGTTaGCATCTTCTTTTGGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETWDIRS*HLLLAF Trigger: AAAAGCCAAAAGAAGATGGCAACTCCTTATGTCCCA...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR GCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTTTTCACAGAATGCCCTaGTTTCTTCTAGGCTATCAA | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETFHRMP*FLLGYQ Trigger: TTGATAGCCTAGAAGAAAGCAGGGCATTCTGTGAAA...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR GCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTACTGGGATTGCAAAATaGCAGCATGATTACAATGCT | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETTGIAK*QHDYNA Trigger: AGCATTGTAATCATGCTGGCATTTTGCAATCCCAGT...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTATCAAATGGACCCGGTaGATCATCCAAACAAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETIKWTR*IIQTKK Trigger: TTTCTTTGTTTGGATGATCCACCGGGTCCATTTGAT...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR TCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTGAAGTATTATCCATTTaGTCAGGAACACTTGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETEVLSI*SGTLVC Trigger: ACAGACAAGTGTTCCTGATCAAATGGATAATACTTC...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR TCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTACTGCTACAGACAGATaGAGTATTATCCATTTGATC | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETTATDR*SIIHLI Trigger: GATCAAATGGATAATACTTCATCTGTCTGTAGCAGT...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR TCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTCATACCTGTGCACTTTaGCAGACTAAAAATTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETHTCAL*QTKNFW Trigger: CCAAAAATTTTTAGTCTGTCAAAGTGCACAGGTATG...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR TCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTCACACTCTTTTTCCTTaGCTCCATGTTACATGTTAT | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETHTLFP*LHVTCY Trigger: ATAACATGTAACATGGAGTCAAGGAAAAAGAGTGTG...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396330.6 |
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| CDS-3UTR GCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTAGCTTGTTGAGACACTaGCAAAAGAAGAACTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETSLLRH*QKKNFF Trigger: AAAGAAGTTCTTCTTTTGGCAGTGTCTCAACAAGCT...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR CCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTTTTGAGTCTTCTAACTaGCCCTTAGAAGAATTTGAG | + |
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Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETFESSN*PLEEFE Trigger: CTCAAATTCTTCTAAGGGCCAGTTAGAAGACTCAAA...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR CCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTTATAGTAGGTGTAGATaGTCTATCTTCCCAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETYSRCR*SIFPIH Trigger: GTGAATTGGGAAGATAGACCATCTACACCTACTATA...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR GCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTTTAAGGACTCCTATTTaGAAGATAGAGAGAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETLRTPI*KIERAK Trigger: TTTTGCTCTCTCTATCTTGCAAATAGGAGTCCTTAA...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396330.6 |
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| CDS-3UTR CCA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTTTCTTCAGTGTCTCTTaGTCTAGTAGAATACTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKEANSLNLGRDKDYVETFFSVS*SSRILN Trigger: ATTGAGTATTCTACTAGACCAAGAGACACTGAAGAA...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS GCA 90 bp | GACGCACAGTGGGGTCGGCGGTGGCCTGAAGGTGGCTGGGCTTCCTaGGGCGCCTCTCCACTCTCCCGCGGAGCCCCTTGCCGCCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DAQWGRRWPEGGWAS*GASPLSRGAPCRPP Trigger: TGGCGGGCGGCAAGGGGCTCCGCGGGAGAGTGGAGAGGCGCCGCAGGAAGCCCAGCCACCTTCAGGCCACCGCCGACCCCACTGTGCGTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521773.5 |
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| CDS CCA 90 bp | CGCCTCCCAGACGCACAGTGGGGTCGGCGGTGGCCTGAAGGTGGCTaGGCTTCCTGCGGCGCCTCTCCACTCTCCCGCGGAGCCCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RLPDAQWGRRWPEGG*ASCGASPLSRGAPC Trigger: GCAAGGGGCTCCGCGGGAGAGTGGAGAGGCGCCGCAGGAAGCCCAGCCACCTTCAGGCCACCGCCGACCCCACTGTGCGTCTGGGAGGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521773.5 |
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| CDS CCA 90 bp | ACGGTGCGCGCCCAGCGCCTCCCAGACGCACAGTGGGGTCGGCGGTaGCCTGAAGGTGGCTGGGCTTCCTGCGGCGCCTCTCCACTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVRAQRLPDAQWGRR*PEGGWASCGASPLS Trigger: GGAGAGTGGAGAGGCGCCGCAGGAAGCCCAGCCACCTTCAGGCCACCGCCGACCCCACTGTGCGTCTGGGAGGCGCTGGGCGCGCACCGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521773.5 |
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| CDS CCA 90 bp | CATCTTGACAGTACGGTGCGCGCCCAGCGCCTCCCAGACGCACAGTaGGGTCGGCGGTGGCCTGAAGGTGGCTGGGCTTCCTGCGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: HLDSTVRAQRLPDAQ*GRRWPEGGWASCGA Trigger: GGCGCCGCAGGAAGCCCAGCCACCTTCAGGCCACCGCCGACCCCACTGTGCGTCTGGGAGGCGCTGGGCGCGCACCGTACTGTCAAGATG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521773.5 |
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| CDS GCA 90 bp | CGGAAGGTAAGGCCGGGGTCTGCGCCGGTCACGGGTCTTCCGCACTaGAGGCGGCGAGACCCGCAGCTCCCTGGGATCACAGACTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RKVRPGSAPVTGLPH*RRRDPQLPGITDSP Trigger: GGGAGAGTCTGTGATCCCAGGGAGCTGCGGGTCTCGCCGCCTGCAGTGCGGAAGACCCGTGACCGGCGCAGACCCCGGCCTTACCTTCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519817.5 |
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| CDS GCA 90 bp | CAAATACCAGGCACAGTTCGACCCTCGGAAGGTAAGGCCGGGGTCTaGGCCGGTCACGGGTCTTCCGCACTGCAGGCGGCGAGACCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: QIPGTVRPSEGKAGV*AGHGSSALQAARPA Trigger: TGCGGGTCTCGCCGCCTGCAGTGCGGAAGACCCGTGACCGGCGCAGACCCCGGCCTTACCTTCCGAGGGTCGAACTGTGCCTGGTATTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519817.5 |
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| CDS TCA 90 bp | CAGTACTCAGCCCCCTCGGCGATCCCGAACGAGCGCGCTTCCCGGTaGCGGTTAAACCGGACTCTCCTTAACCGCAGCTTTTCGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QYSAPSAIPNERASR*RLNRTLLNRSFSPP Trigger: AGGAGGCGAAAAGCTGCGGTTAAGGAGAGTCCGGTTTAACCGTCACCGGGAAGCGCGCTCGTTCGGGATCGCCGAGGGGGCTGAGTACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000396330.6 ENST00000518183.5 ENST00000519119.5 |
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| CDS TCA 90 bp | ACTATCTCAGCCCCCTCGGCGATCCCGAACGAGCGCGCTTCCCGGTaGCGGTTAAACCGGACTCTCCTTAACCGCAGCTTTTCGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TISAPSAIPNERASR*RLNRTLLNRSFSPP Trigger: AGGAGGCGAAAAGCTGCGGTTAAGGAGAGTCCGGTTTAACCGTCACCGGGAAGCGCGCTCGTTCGGGATCGCCGAGGGGGCTGAGATAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520618.5 |
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| CDS TCA 90 bp | TGCTCCCAGGACGCTCAGTTCATTCTCACTCTGGAAAACCTCAGGTaGGGTGGCCCGACTCTGAGCAACCCCGTGGGCGGGAGGAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSQDAQFILTLENLR*GGPTLSNPVGGRKE Trigger: CTCTTTCCTCCCGCCCACGGGGTTGCTCAGAGTCGGGCCACCTCACCTGAGGTTTTCCAGAGTGAGAATGAACTGAGCGTCCTGGGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000519817.5 |
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| CDS CCA 90 bp | CCAGGACGCTCAGTTCATTCTCACTCTGGAAAACCTCAGGTGAGGTaGCCCGACTCTGAGCAACCCCGTGGGCGGGAGGAAAGAGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PGRSVHSHSGKPQVR*PDSEQPRGREERGK Trigger: TTTGCCTCTTTCCTCCCGCCCACGGGGTTGCTCAGAGTCGGGCCACCTCACCTGAGGTTTTCCAGAGTGAGAATGAACTGAGCGTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000519817.5 |
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| CDS TCA 90 bp | AGTTCATTCTCACTCTGGAAAACCTCAGGTGAGGTGGCCCGACTCTaGGCAACCCCGTGGGCGGGAGGAAAGAGGCAAATACCAGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SSFSLWKTSGEVARL*ATPWAGGKRQIPGT Trigger: TGTGCCTGGTATTTGCCTCTTTCCTCCCGCCCACGGGGTTGCTCAGAGTCGGGCCACCTCACCTGAGGTTTTCCAGAGTGAGAATGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000519817.5 |
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| CDS-3UTR CAA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACTCCATGCTTATCATCTaGACAGTACTCAGCCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QKARLKKWLVRFRTDRQHSMLII*TVLSPL Trigger: GAGGGGGCTGAGTACTGTCAAGATGATAAGCATGGA...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000396330.6 |
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| CDS-3UTR CAA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACGCTTTTCCAACAAGCTaGCACACTGTTGAGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: QKARLKKWLVRFRTDRQHAFPTS*HTVEST Trigger: AGTGGACTCAACAGTGTGCAAGCTTGTTGGAAAAGC...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CAA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACGCATACCGACTGGGATaGCAAAATGCCAGCATGATT | + |
|
Preference number: 5 (lower is better) Translates to: QKARLKKWLVRFRTDRQHAYRLG*QNASMI Trigger: AATCATGCTGGCATTTTGCAATCCCAGTCGGTATGC...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CAA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACCACTGTTTCCGGATTTaGTTCTTCAGTGTCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QKARLKKWLVRFRTDRQHHCFRI*FFSVSW Trigger: CCAAGAGACACTGAAGAACAAAATCCGGAAACAGTG...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CAA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACTTCATCCAGGACATCTaGATCAACCTCAAGTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QKARLKKWLVRFRTDRQHFIQDI*INLKCR Trigger: TCTGCACTTGAGGTTGATCAAGATGTCCTGGATGAA...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CAA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACTTCCAAAAAGCCAGATaGAAAAAGTGGCTGGTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: QKARLKKWLVRFRTDRQHFQKAR*KKWLVR Trigger: GCGAACCAGCCACTTTTTCAATCTGGCTTTTTGGAA...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CAA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACAACCCCTTCTCCCAGTaGTCTTTAAGGACTCCTATT | + |
|
Preference number: 5 (lower is better) Translates to: QKARLKKWLVRFRTDRQHNPFSQ*SLRTPI Trigger: AATAGGAGTCCTTAAAGACAACTGGGAGAAGGGGTT...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000396330.6 |
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| CDS-3UTR CAA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACAGTTGCCATCTTCTTTaGGCTTTTCCAACAAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QKARLKKWLVRFRTDRQHSCHLL*AFPTSL Trigger: CAAGCTTGTTGGAAAAGCCAAAAGAAGATGGCAACT...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CAA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACTTGGTAGGAGAAAGATaGGTAAAGACCCTTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QKARLKKWLVRFRTDRQHLVGER*VKTLLK Trigger: CTTCAGAAGGGTCTTTACCAATCTTTCTCCTACCAA...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000396330.6 |
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| CDS TCA 90 bp | AAGCATGGTTTATTATCAGCTCTAGATTCTTCATCCAGGACATCTTaGTCAACCTCAAGTGCAGAGGACTCCACCTTTAGGATCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KHGLLSALDSSSRTS*STSSAEDSTFRICS Trigger: TGAACAGATCCTAAAGGTGGAGTCCTCTGCACTTGAGGTTGATCAAGATGTCCTGGATGAAGAATCTAGAGCTGATAATAAACCATGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CAA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACAAGAATTTGAGCTTGTaGAGACACTGCCAAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QKARLKKWLVRFRTDRQHKNLSL*RHCQKK Trigger: CTTCTTTTGGCAGTGTCTCAACAAGCTCAAATTCTT...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CAA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACTCTGTAAGCGGTAGTTaGTCTCTTCTAAAGTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: QKARLKKWLVRFRTDRQHSVSGS*SLLKFH Trigger: GTGAAACTTTAGAAGAGACAAACTACCGCTTACAGA...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTGCTTTTCCAACAAGCTaGCACACTGTTGAGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LKEANSLNLGRDKDYVETAFPTS*HTVEST Trigger: AGTGGACTCAACAGTGTGCAAGCTTGTTGGAAAAGC...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTGCATACCGACTGGGATaGCAAAATGCCAGCATGATT | + |
|
Preference number: 5 (lower is better) Translates to: LKEANSLNLGRDKDYVETAYRLG*QNASMI Trigger: AATCATGCTGGCATTTTGCAATCCCAGTCGGTATGC...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CAA 90 bp | CAAAAAGCCAGATTGAAAAAGTGGCTGGTTCGCTTTAGAACAGACAGGCAACACTTTAAGGACTCCTATTaGCAAGATAGAGAGAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QKARLKKWLVRFRTDRQHFKDSY*QDRESK Trigger: TTTGCTCTCTCTATCTTGCAAATAGGAGTCCTTAAA...GTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGCTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000396330.6 |
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| CDS GCA 90 bp | TTAATTGTTCCTCTTTTCATGTGCTATATAATACAGCACTTACCCTaGTTTCTTCTAGGCTATCAAATGGACCCGGTGGATCATCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LIVPLFMCYIIQHLP*FLLGYQMDPVDHPN Trigger: GTTTGGATGATCCACCGGGTCCATTTGATAGCCTAGAAGAAAGCAGGGTAAGTGCTGTATTATATAGCACATGAAAAGAGGAACAATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519212.1 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTCAAGCTTGCACACTGTaGAGTCCACTTAGAGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: LKEANSLNLGRDKDYVETQACTL*SPLREQ Trigger: TTGTTCTCTAAGTGGACTCAACAGTGTGCAAGCTTG...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTCTGGGACATAAGGAGTaGCCATCTTCTTTTGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LKEANSLNLGRDKDYVETLGHKE*PSSFGF Trigger: AAAGCCAAAAGAAGATGGCAACTCCTTATGTCCCAG...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTCACTGTTTCCGGATTTaGTTCTTCAGTGTCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LKEANSLNLGRDKDYVETHCFRI*FFSVSW Trigger: CCAAGAGACACTGAAGAACAAAATCCGGAAACAGTG...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTTTCATCCAGGACATCTaGATCAACCTCAAGTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LKEANSLNLGRDKDYVETFIQDI*INLKCR Trigger: TCTGCACTTGAGGTTGATCAAGATGTCCTGGATGAA...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTTTCCAAAAAGCCAGATaGAAAAAGTGGCTGGTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LKEANSLNLGRDKDYVETFQKAR*KKWLVR Trigger: GCGAACCAGCCACTTTTTCAATCTGGCTTTTTGGAA...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTAGTTGCCATCTTCTTTaGGCTTTTCCAACAAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LKEANSLNLGRDKDYVETSCHLL*AFPTSL Trigger: CAAGCTTGTTGGAAAAGCCAAAAGAAGATGGCAACT...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS TCA 90 bp | GTCCTAATGAGGGGACTGCTACAGACAGATGAAGTATTATCCATTTaGTCAGGAACACTTGTCTGTTTAAAATTACCCATATTTGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLMRGLLQTDEVLSI*SGTLVCLKLPIFES Trigger: AGACTCAAATATGGGTAATTTTAAACAGACAAGTGTTCCTGATCAAATGGATAATACTTCATCTGTCTGTAGCAGTCCCCTCATTAGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000518183.5 ENST00000519817.5 ENST00000520618.5 ENST00000521810.5 ENST00000615066.1 |
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| CDS TCA 90 bp | GGTTCTAAAGACAATGTTCTGATTCTGTTCTCTAAAGTGTCTATATaGAGTTGCTTCTCACTGAGCAGTTTCTTTAGTGATTCCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSKDNVLILFSKVSI*SCFSLSSFFSDSIS Trigger: GGAGATGGAATCACTAAAGAAACTGCTCAGTGAGAAGCAACTTCATATAGACACTTTAGAGAACAGAATCAGAACATTGTCTTTAGAACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTAAGAATTTGAGCTTGTaGAGACACTGCCAAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LKEANSLNLGRDKDYVETKNLSL*RHCQKK Trigger: CTTCTTTTGGCAGTGTCTCAACAAGCTCAAATTCTT...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTTCTGTAAGCGGTAGTTaGTCTCTTCTAAAGTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LKEANSLNLGRDKDYVETSVSGS*SLLKFH Trigger: GTGAAACTTTAGAAGAGACAAACTACCGCTTACAGA...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAGGCAAACTCACTAAATCTAGGTAGAGATAAAGATTACGTGGAAACTAGCCAGTTAGGAACTTaGCAGTATATATGGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LKEANSLNLGRDKDYVETSQLGT*QYIWLF Trigger: AAAAAGCCATATATACTGCAAAGTTCCTAACTGGCT...AGTTTCCACGTAATCTTTATCTCTACCTAGATTTAGTGAGTTTGCCTCTTTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 |
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| CDS TCA 90 bp | TGTACCTGTAAATTTAGTCCTAATGAGGGGACTGCTACAGACAGATaGAGTATTATCCATTTGATCAGGAACACTTGTCTGTTTAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: CTCKFSPNEGTATDR*SIIHLIRNTCLFKI Trigger: AATTTTAAACAGACAAGTGTTCCTGATCAAATGGATAATACTTCATCTGTCTGTAGCAGTCCCCTCATTAGGACTAAATTTACAGGTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000518183.5 ENST00000519817.5 ENST00000520618.5 ENST00000521810.5 ENST00000615066.1 |
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| CDS GCA 72 bp | TGGGGTCGGCGGTGGCCTGAAGGTGGCTGGGCTTCCTaGGGCGCCTCTCCACTCTCCCGCGGAGCCCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: WGRRWPEGGWAS*GASPLSRGAPC Trigger: GCAAGGGGCTCCGCGGGAGAGTGGAGAGGCGCCGCAGGAAGCCCAGCCACCTTCAGGCCACCGCCGACCCCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521773.5 |
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| CDS GCA 72 bp | AGGCCGGGGTCTGCGCCGGTCACGGGTCTTCCGCACTaGAGGCGGCGAGACCCGCAGCTCCCTGGGATCACA | + |
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Preference number: 6 (lower is better) Translates to: RPGSAPVTGLPH*RRRDPQLPGIT Trigger: TGTGATCCCAGGGAGCTGCGGGTCTCGCCGCCTGCAGTGCGGAAGACCCGTGACCGGCGCAGACCCCGGCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519817.5 |
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| CDS CCA 72 bp | GACGCACAGTGGGGTCGGCGGTGGCCTGAAGGTGGCTaGGCTTCCTGCGGCGCCTCTCCACTCTCCCGCGGA | + |
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Preference number: 6 (lower is better) Translates to: DAQWGRRWPEGG*ASCGASPLSRG Trigger: TCCGCGGGAGAGTGGAGAGGCGCCGCAGGAAGCCCAGCCACCTTCAGGCCACCGCCGACCCCACTGTGCGTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521773.5 |
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| CDS GCA 72 bp | GGCACAGTTCGACCCTCGGAAGGTAAGGCCGGGGTCTaGGCCGGTCACGGGTCTTCCGCACTGCAGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: GTVRPSEGKAGV*AGHGSSALQAA Trigger: CGCCGCCTGCAGTGCGGAAGACCCGTGACCGGCGCAGACCCCGGCCTTACCTTCCGAGGGTCGAACTGTGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519817.5 |
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| CDS TCA 72 bp | GCCCCCTCGGCGATCCCGAACGAGCGCGCTTCCCGGTaGCGGTTAAACCGGACTCTCCTTAACCGCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: APSAIPNERASR*RLNRTLLNRSF Trigger: AAAGCTGCGGTTAAGGAGAGTCCGGTTTAACCGTCACCGGGAAGCGCGCTCGTTCGGGATCGCCGAGGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000396330.6 ENST00000518183.5 ENST00000519119.5 ENST00000520618.5 |
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| CDS TCA 72 bp | GACGCTCAGTTCATTCTCACTCTGGAAAACCTCAGGTaGGGTGGCCCGACTCTGAGCAACCCCGTGGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: DAQFILTLENLR*GGPTLSNPVGG Trigger: CCCGCCCACGGGGTTGCTCAGAGTCGGGCCACCTCACCTGAGGTTTTCCAGAGTGAGAATGAACTGAGCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000519817.5 |
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| CDS TCA 72 bp | TCACTCTGGAAAACCTCAGGTGAGGTGGCCCGACTCTaGGCAACCCCGTGGGCGGGAGGAAAGAGGCAAATA | + |
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Preference number: 6 (lower is better) Translates to: SLWKTSGEVARL*ATPWAGGKRQI Trigger: TATTTGCCTCTTTCCTCCCGCCCACGGGGTTGCTCAGAGTCGGGCCACCTCACCTGAGGTTTTCCAGAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000519817.5 |
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| CDS CCA 72 bp | TCAGTTCATTCTCACTCTGGAAAACCTCAGGTGAGGTaGCCCGACTCTGAGCAACCCCGTGGGCGGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: SVHSHSGKPQVR*PDSEQPRGREE Trigger: TTCCTCCCGCCCACGGGGTTGCTCAGAGTCGGGCCACCTCACCTGAGGTTTTCCAGAGTGAGAATGAACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000519817.5 |
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| CDS TCA 72 bp | GGTTTATTATCAGCTCTAGATCTCATCCAGACATCTTaGTCAACCTCAAGTGCAGAGGACTCCACCTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: GLLSALDLIQTS*STSSAEDSTFR Trigger: CCTAAAGGTGGAGTCCTCTGCACTTGAGGTTGATCAAGATGTCTGGATGAGATCTAGAGCTGATAATAAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615066.1 |
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| CDS GCA 72 bp | CCTCTTTTCATGTGCTATATAATACAGCACTTACCCTaGTTTCTTCTAGGCTATCAAATGGACCCGGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: PLFMCYIIQHLP*FLLGYQMDPVD Trigger: ATCCACCGGGTCCATTTGATAGCCTAGAAGAAAGCAGGGTAAGTGCTGTATTATATAGCACATGAAAAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519212.1 |
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| CDS TCA 72 bp | AAATTTAGTCCTAATGAGGGGACTGCTACAGACAGATaGAGTATTATCCATTTGATCAGGAACACTTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: KFSPNEGTATDR*SIIHLIRNTCL Trigger: CAGACAAGTGTTCCTGATCAAATGGATAATACTTCATCTGTCTGTAGCAGTCCCCTCATTAGGACTAAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000518183.5 ENST00000519817.5 ENST00000520618.5 ENST00000521810.5 ENST00000615066.1 |
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| CDS TCA 72 bp | GACAATGTTCTGATTCTGTTCTCTAAAGTGTCTATATaGAGTTGCTTCTCACTGAGCAGTTTCTTTAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: DNVLILFSKVSI*SCFSLSSFFSD Trigger: ATCACTAAAGAAACTGCTCAGTGAGAAGCAACTTCATATAGACACTTTAGAGAACAGAATCAGAACATTGTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000345957.9 ENST00000353788.8 ENST00000396330.6 ENST00000615066.1 |
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