RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000028528

Ensembl transcript IDs: ENST00000261889.9, ENST00000380285.7, ENST00000558040.5, ENST00000559061.5, ENST00000559389.1, ENST00000559401.1, ENST00000559844.6, ENST00000559961.1, ENST00000560260.5, ENST00000560829.5, ENST00000560861.1, ENST00000561026.5, ENST00000625244.2

Found 1004 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGAGCCTCGGCCTCCCGCTTCTTCTGCAGTGTGGCTTGGGCATCCTaGCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGCGG +
Preference number: 1 (lower is better)
Translates to: RASASRFFCSVAWAS*QRCHVFMRWSKAAR
Trigger: CCGCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGCCGAGGCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR CCA 90 bp TGGCCCACAGCAGCCGAGCCTCGGCCTCCCGCTTCTTCTGCAGTGTaGCTTGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGT +
Preference number: 1 (lower is better)
Translates to: WPTAAEPRPPASSAV*LGHPASAAMSSCAG
Trigger: ACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGCCGAGGCTCGGCTGCTGTGGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR GCA 90 bp GGCTTGTTGGCCCACAGCAGCCGAGCCTCGGCCTCCCGCTTCTTCTaGAGTGTGGCTTGGGCATCCTGCCAGCGCTGCCATGTCTTCATG +
Preference number: 1 (lower is better)
Translates to: GLLAHSSRASASRFF*SVAWASCQRCHVFM
Trigger: CATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGCCGAGGCTCGGCTGCTGTGGGCCAACAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR GCA 90 bp GGCTGCCTCAGTGGACTCACCTCGAGGATCTCGTCCTTGGCCTGCTaGAGCTTATCAGGCTTGTTGGCCCACAGCAGCCGAGCCTCGGCC +
Preference number: 1 (lower is better)
Translates to: GCLSGLTSRISSLAC*SLSGLLAHSSRASA
Trigger: GGCCGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGGTGAGTCCACTGAGGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR CCA 90 bp CACAGCAGCCGAGCCTCGGCCTCCCGCTTCTTCTGCAGTGTGGCTTaGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAG +
Preference number: 1 (lower is better)
Translates to: HSSRASASRFFCSVA*ASCQRCHVFMRWSK
Trigger: CTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGCCGAGGCTCGGCTGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR GCA 90 bp CTGGGCTGCCTCAGTGGACTCACCTCGAGGATCTCGTCCTTGGCCTaGTGCAGCTTATCAGGCTTGTTGGCCCACAGCAGCCGAGCCTCG +
Preference number: 1 (lower is better)
Translates to: LGCLSGLTSRISSLA*CSLSGLLAHSSRAS
Trigger: CGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGGTGAGTCCACTGAGGCAGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR GCA 90 bp GGGCCCTGGGTTCATTTGGAACCAGCAGAACACCCCTGGCTGGGCTaGCTCAGTGGACTCACCTCGAGGATCTCGTCCTTGGCCTGCTGC +
Preference number: 1 (lower is better)
Translates to: GPWVHLEPAEHPWLG*LSGLTSRISSLACC
Trigger: GCAGCAGGCCAAGGACGAGATCCTCGAGGTGAGTCCACTGAGGCAGCCCAGCCAGGGGTGTTCTGCTGGTTCCAAATGAACCCAGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR CCA 90 bp CCTCGAGGATCTCGTCCTTGGCCTGCTGCAGCTTATCAGGCTTGTTaGCCCACAGCAGCCGAGCCTCGGCCTCCCGCTTCTTCTGCAGTG +
Preference number: 1 (lower is better)
Translates to: PRGSRPWPAAAYQAC*PTAAEPRPPASSAV
Trigger: CACTGCAGAAGAAGCGGGAGGCCGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR CCA 90 bp ACTCGAGGATCTCGTCCTTGGCCTGCTGCAGCTTATCAGGCTTGTTaGCCCACAGCAGCCGAGCCTCGGCCTCCCGCTTCTTCTGCAGTG +
Preference number: 1 (lower is better)
Translates to: TRGSRPWPAAAYQAC*PTAAEPRPPASSAV
Trigger: CACTGCAGAAGAAGCGGGAGGCCGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR CCA 90 bp GGGATGGGCCCTGGGTTCATTTGGAACCAGCAGAACACCCCTGGCTaGGCTGCCTCAGTGGACTCACCTCGAGGATCTCGTCCTTGGCCT +
Preference number: 1 (lower is better)
Translates to: GMGPGFIWNQQNTPG*AASVDSPRGSRPWP
Trigger: AGGCCAAGGACGAGATCCTCGAGGTGAGTCCACTGAGGCAGCCCAGCCAGGGGTGTTCTGCTGGTTCCAAATGAACCCAGGGCCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR CCA 90 bp GGGTGGGATGGGCCCTGGGTTCATTTGGAACCAGCAGAACACCCCTaGCTGGGCTGCCTCAGTGGACTCACCTCGAGGATCTCGTCCTTG +
Preference number: 1 (lower is better)
Translates to: GWDGPWVHLEPAEHP*LGCLSGLTSRISSL
Trigger: CAAGGACGAGATCCTCGAGGTGAGTCCACTGAGGCAGCCCAGCCAGGGGTGTTCTGCTGGTTCCAAATGAACCCAGGGCCCATCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR CCA 90 bp CTGTGGGGTTCCAAACCTCTGGGTGGGATGGGCCCTGGGTTCATTTaGAACCAGCAGAACACCCCTGGCTGGGCTGCCTCAGTGGACTCA +
Preference number: 1 (lower is better)
Translates to: LWGSKPLGGMGPGFI*NQQNTPGWAASVDS
Trigger: TGAGTCCACTGAGGCAGCCCAGCCAGGGGTGTTCTGCTGGTTCCAAATGAACCCAGGGCCCATCCCACCCAGAGGTTTGGAACCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR TCA 90 bp CTTGAGCAGCTGTGGACACAGCTAAGGGGGAAGCCCATCCTTGACTaGCGAGACTCTGGCCTCCCCTGGCTAGACCGGCAGAGATCTGTG +
Preference number: 1 (lower is better)
Translates to: LEQLWTQLRGKPILD*RDSGLPWLDRQRSV
Trigger: CACAGATCTCTGCCGGTCTAGCCAGGGGAGGCCAGAGTCTCGTCAGTCAAGGATGGGCTTCCCCCTTAGCTGTGTCCACAGCTGCTCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR CCA 90 bp TGGCCTCCCCTGGCTAGACCGGCAGAGATCTGTGTGAACACCCTTTaGCTGTGTGTGCAACTCCTGAGGGCTCTTGCTGGCAGGCTACCT +
Preference number: 1 (lower is better)
Translates to: WPPLARPAEICVNTL*LCVQLLRALAGRLP
Trigger: AGGTAGCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCTAGCCAGGGGAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR CCA 90 bp CCACCACCTTGGGGCTTGATGTCCTTGAAGTCTATGGGCTTCCCGTaGGCCCTGAGTGTGCTCGGCAAAAGACACGCCCTCCATCACCAC +
Preference number: 1 (lower is better)
Translates to: PPPWGLMSLKSMGFP*ALSVLGKRHALHHH
Trigger: GTGGTGATGGAGGGCGTGTCTTTTGCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAGCCCCAAGGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
3UTR CCA 90 bp GGTTCATTTGGAACCAGCAGAACACCCCTGGCTGGGCTGCCTCAGTaGACTCACCTCGAGGATCTCGTCCTTGGCCTGCTGCAGCTTATC +
Preference number: 1 (lower is better)
Translates to: GSFGTSRTPLAGLPQ*THLEDLVLGLLQLI
Trigger: GATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGGTGAGTCCACTGAGGCAGCCCAGCCAGGGGTGTTCTGCTGGTTCCAAATGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR CCA 90 bp ATCCAGGCATGTGCGCACTGTAGCACAGATGTGTCCTCCTATGTTTaGAGCCAGGGATCCCCATTATCTTCTCCCGCCCTCCCCTTCCCC +
Preference number: 1 (lower is better)
Translates to: IQACAHCSTDVSSYV*SQGSPLSSPALPFP
Trigger: GGGGAAGGGGAGGGCGGGAGAAGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCGCACATGCCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
3UTR TCA 90 bp GGTGTCGGCGCTGTTGGGAAGGACTGGGAGATAAAGAGGGAAAGGTaGGCTGGGTCCTTTCACAGACAGTATGAACGCCAGGTGGCAGAG +
Preference number: 1 (lower is better)
Translates to: GVGAVGKDWEIKRER*AGSFHRQYERQVAE
Trigger: CTCTGCCACCTGGCGTTCATACTGTCTGTGAAAGGACCCAGCTCACCTTTCCCTCTTTATCTCCCAGTCCTTCCCAACAGCGCCGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 90 bp TTTAGACTCAATCAGCGCTCTTCCCCCTGTGGGGTTCCAAACCTCTaGGTGGGATGGGCCCTGGGTTCATTTGGAACCAGCAGAACACCC +
Preference number: 1 (lower is better)
Translates to: FRLNQRSSPCGVPNL*VGWALGSFGTSRTP
Trigger: GGGTGTTCTGCTGGTTCCAAATGAACCCAGGGCCCATCCCACCCAGAGGTTTGGAACCCCACAGGGGGAAGAGCGCTGATTGAGTCTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR CCA 90 bp CAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGGGTCCTTaGTCCATTAGGAGATGGCCTTTGCCTCAGGAAGGAAGGCTTCCC +
Preference number: 1 (lower is better)
Translates to: QCIKRQRHTGGLWGP*SIRRWPLPQEGRLP
Trigger: GGGAAGCCTTCCTTCCTGAGGCAAAGGCCATCTCCTAATGGACCAAGGACCCCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR CCA 90 bp GGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTaGGGTCCTTGGTCCATTAGGAGATGGCCTTTGCCTCAGGAAGGA +
Preference number: 1 (lower is better)
Translates to: GGGQCIKRQRHTGGL*GPWSIRRWPLPQEG
Trigger: TCCTTCCTGAGGCAAAGGCCATCTCCTAATGGACCAAGGACCCCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR CCA 90 bp CTTGAGGAGACCAGCACCACTCAATGTCTGGGTACCCACGGCACGTaGCAGCTACAAGACCAAGAAGGCAGGGATGGCAAGTTATCTGCT +
Preference number: 1 (lower is better)
Translates to: LEETSTTQCLGTHGT*QLQDQEGRDGKLSA
Trigger: AGCAGATAACTTGCCATCCCTGCCTTCTTGGTCTTGTAGCTGCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTCTCCTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR CCA 90 bp GTGGCTTTGTTGAACATCTTGAGGAGACCAGCACCACTCAATGTCTaGGTACCCACGGCACGTGGCAGCTACAAGACCAAGAAGGCAGGG +
Preference number: 1 (lower is better)
Translates to: VALLNILRRPAPLNV*VPTARGSYKTKKAG
Trigger: CCCTGCCTTCTTGGTCTTGTAGCTGCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR TCA 90 bp CTCTCATCAAATCAAGGACCGATCTCAGTGGTTCCGAAACTCTCCTaGGCTCTGGCCCCACCATACCTGCCCTTTTCAGCTCTCCTGAGG +
Preference number: 1 (lower is better)
Translates to: LSSNQGPISVVPKLS*ALAPPYLPFSALLR
Trigger: CCTCAGGAGAGCTGAAAAGGGCAGGTATGGTGGGGCCAGAGCTCAGGAGAGTTTCGGAACCACTGAGATCGGTCCTTGATTTGATGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 90 bp AGAGTGCCCGTGACAATGCCGTGTTGTCCTCAGAGCTCCCAAGCATaGCTAGACTCTTTGCAAACTGGGCTGTGTTCAGCGCTAGCTCTT +
Preference number: 1 (lower is better)
Translates to: RVPVTMPCCPQSSQA*LDSLQTGLCSALAL
Trigger: AAGAGCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACACGGCATTGTCACGGGCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR CCA 90 bp TATTGCCTCATGTGTTACAAAGGGTTTCATTGTCTGCCCAGTGTCTaGGCCAGAAGCTTGCGGGGCATCCTAGCTACCTCCCTCTCCCCT +
Preference number: 1 (lower is better)
Translates to: YCLMCYKGFHCLPSV*ARSLRGILATSLSP
Trigger: AGGGGAGAGGGAGGTAGCTAGGATGCCCCGCAAGCTTCTGGCCCAGACACTGGGCAGACAATGAAACCCTTTGTAACACATGAGGCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 90 bp TCTTCCAGCCTCTGCTACTACTCCACTGGGCAACCCCTGCCCATCTaGGGAAAGAATGTCTTGCAGGGGTCAGAGAAGCTCCAATGCTTA +
Preference number: 1 (lower is better)
Translates to: SSSLCYYSTGQPLPI*GKNVLQGSEKLQCL
Trigger: TAAGCATTGGAGCTTCTCTGACCCCTGCAAGACATTCTTTCCCCAGATGGGCAGGGGTTGCCCAGTGGAGTAGTAGCAGAGGCTGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558040.5
3UTR TCA 90 bp TTTTTCTCCATGGGCCTCACTGACTTTACCCTACACCAAGCCACTTaGCATTTCCCTAGATGCGCCTACCTCACCCTGCCAGACAGACAG +
Preference number: 1 (lower is better)
Translates to: FFSMGLTDFTLHQAT*HFPRCAYLTLPDRQ
Trigger: CTGTCTGTCTGGCAGGGTGAGGTAGGCGCATCTAGGGAAATGTCAAGTGGCTTGGTGTAGGGTAAAGTCAGTGAGGCCCATGGAGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR TCA 90 bp ATGGTAATGTGGAAAGCGCCTCCCAGGTCCTATCAGACACCCATGTaGTGTGGCTCCTGCTCGTTTTTCTCCATGGGCCTCACTGACTTT +
Preference number: 1 (lower is better)
Translates to: MVMWKAPPRSYQTPM*CGSCSFFSMGLTDF
Trigger: AAAGTCAGTGAGGCCCATGGAGAAAAACGAGCAGGAGCCACATCACATGGGTGTCTGATAGGACCTGGGAGGCGCTTTCCACATTACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR GCA 90 bp AGCGCTAGCTCTTTCCTATGGTTGACTAGAGTTTCTACAACAGCATaGAGTTTCCGTAAGCGCTGCTCCTCACACTCTACCTCCTGGAGC +
Preference number: 1 (lower is better)
Translates to: SASSFLWLTRVSTTA*SFRKRCSSHSTSWS
Trigger: GCTCCAGGAGGTAGAGTGTGAGGAGCAGCGCTTACGGAAACTGCATGCTGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGCTAGCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR GCA 90 bp TACACCAAGCCACTTGACATTTCCCTAGATGCGCCTACCTCACCCTaGCAGACAGACAGGGAGGCAGAAGCAACAAACACTTTTACACCT +
Preference number: 1 (lower is better)
Translates to: YTKPLDISLDAPTSP*QTDREAEATNTFTP
Trigger: AGGTGTAAAAGTGTTTGTTGCTTCTGCCTCCCTGTCTGTCTGGCAGGGTGAGGTAGGCGCATCTAGGGAAATGTCAAGTGGCTTGGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR GCA 90 bp CCCATCTGGGGAAAGAATGTCTTGCAGGGGTCAGAGAAGCTCCAATaGTTACCAGGTCAGGTGGGTATCCAAATGGGACTTGTCCTTAAC +
Preference number: 1 (lower is better)
Translates to: PIWGKNVLQGSEKLQ*LPGQVGIQMGLVLN
Trigger: GTTAAGGACAAGTCCCATTTGGATACCCACCTGACCTGGTAAGCATTGGAGCTTCTCTGACCCCTGCAAGACATTCTTTCCCCAGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558040.5
3UTR CCA 90 bp GTGGCTTTGTTGAACATCTTGAGGAGACCAGCACCACTCAATGTCTaGGTACCCACGGCACGTGGCAGCTCTTCTTTTTCCAAGAACTCT +
Preference number: 1 (lower is better)
Translates to: VALLNILRRPAPLNV*VPTARGSSSFSKNS
Trigger: AGAGTTCTTGGAAAAAGAAGAGCTGCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR CCA 90 bp ACACGTGCAAGCTCTTTACAAAAATGCACAAGCCCTAAAGACAACTaGCCCCGCCAGCCTCAGGATACAGGAAGCAGAGGAGGAAGTTCT +
Preference number: 1 (lower is better)
Translates to: TRASSLQKCTSPKDN*PRQPQDTGSRGGSS
Trigger: AGAACTTCCTCCTCTGCTTCCTGTATCCTGAGGCTGGCGGGGCCAGTTGTCTTTAGGGCTTGTGCATTTTTGTAAAGAGCTTGCACGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 90 bp TTAGACTCAGTTCAAGCATCAGGTTCTCCACAAAGTCCTCCCTCCTaGGTCCCCAGCTGGAATACCACCTTCTTCCTTTGTGCTCCTGTT +
Preference number: 1 (lower is better)
Translates to: LDSVQASGSPQSPPS*VPSWNTTFFLCAPV
Trigger: AACAGGAGCACAAAGGAAGAAGGTGGTATTCCAGCTGGGGACCCAGGAGGGAGGACTTTGTGGAGAACCTGATGCTTGAACTGAGTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 90 bp CCTATCAGACACCCATGTGATGTGGCTCCTGCTCGTTTTTCTCCATaGGCCTCACTGACTTTACCCTACACCAAGCCACTTGACATTTCC +
Preference number: 1 (lower is better)
Translates to: PIRHPCDVAPARFSP*ASLTLPYTKPLDIS
Trigger: GGAAATGTCAAGTGGCTTGGTGTAGGGTAAAGTCAGTGAGGCCCATGGAGAAAAACGAGCAGGAGCCACATCACATGGGTGTCTGATAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR TCA 90 bp AGAAGTGGGAATACGAAACAGATTGAGACCCTCAGAACAGGTAGCTaGGGTAGGCGGAGAGAAAGAAACCCCATTTCCAGAGGGAAGCAG +
Preference number: 1 (lower is better)
Translates to: RSGNTKQIETLRTGS*GRRRERNPISRGKQ
Trigger: CTGCTTCCCTCTGGAAATGGGGTTTCTTTCTCTCCGCCTACCTCAGCTACCTGTTCTGAGGGTCTCAATCTGTTTCGTATTCCCACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR TCA 90 bp GCTCGAAGTCCAGTCCTCATCTTCAGCACTCCGGAGCCCAAACGCTaGACTAGCCAAGGGGAAAGCAGGTTCCATACCTTTTATCTAAAA +
Preference number: 1 (lower is better)
Translates to: ARSPVLIFSTPEPKR*TSQGESRFHTFYLK
Trigger: TTTTAGATAAAAGGTATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGAAGATGAGGACTGGACTTCGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR GCA 90 bp CTACTGGCCTACTTGATTTCCACACGTGCAAGCTCTTTACAAAAATaGACAAGCCCTAAAGACAACTGGCCCCGCCAGCCTCAGGATACA +
Preference number: 1 (lower is better)
Translates to: LLAYLISTRASSLQK*TSPKDNWPRQPQDT
Trigger: TGTATCCTGAGGCTGGCGGGGCCAGTTGTCTTTAGGGCTTGTGCATTTTTGTAAAGAGCTTGCACGTGTGGAAATCAAGTAGGCCAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 90 bp GGGAAAGGTGAGCTGGGTCCTTTCACAGACAGTATGAACGCCAGGTaGCAGAGCCTGCAACTGGGGAACAATCATTCAACAGTTATCTAT +
Preference number: 1 (lower is better)
Translates to: GKGELGPFTDSMNAR*QSLQLGNNHSTVIY
Trigger: ATAGATAACTGTTGAATGATTGTTCCCCAGTTGCAGGCTCTGCCACCTGGCGTTCATACTGTCTGTGAAAGGACCCAGCTCACCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 90 bp ACAGACAGTAGAGCTTCTTTGAACCTCCTAAGGTTCAGGAGCTCTTaGATCACCCTATCTAGAGGCAGAGGGCATGGCTTTCATGTCTAT +
Preference number: 1 (lower is better)
Translates to: TDSRASLNLLRFRSS*ITLSRGRGHGFHVY
Trigger: ATAGACATGAAAGCCATGCCCTCTGCCTCTAGATAGGGTGATCCAAGAGCTCCTGAACCTTAGGAGGTTCAAAGAAGCTCTACTGTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR TCA 90 bp ACTTACTATACCTGGGCAACTTCTTGGTTAGGAGTATTCCAGACCTaGTTCCCAACTGCTCCCCAGCCTAAGCAAAAACCACCAACATTC +
Preference number: 1 (lower is better)
Translates to: TYYTWATSWLGVFQT*FPTAPQPKQKPPTF
Trigger: GAATGTTGGTGGTTTTTGCTTAGGCTGGGGAGCAGTTGGGAATCAGGTCTGGAATACTCCTAACCAAGAAGTTGCCCAGGTATAGTAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 90 bp AGCAACCTGAAATCTTTGTCTCTCTGGAGGAAAGAGTTAACAACATaGAAAAGGGGGCAGACTGGAATAAACCTACAGGGCTGGTCTCAA +
Preference number: 1 (lower is better)
Translates to: SNLKSLSLWRKELTT*KRGQTGINLQGWSQ
Trigger: TTGAGACCAGCCCTGTAGGTTTATTCCAGTCTGCCCCCTTTTCCATGTTGTTAACTCTTTCCTCCAGAGAGACAAAGATTTCAGGTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR TCA 90 bp GGATTTCTCTTTCTCAAACCGTATCACTTCTTTTCGGACCACTGTTaGAATCCTCTCGAAGTCCCTTTCATATTGAGTCACCCGAGACTC +
Preference number: 1 (lower is better)
Translates to: GFLFLKPYHFFSDHC*NPLEVPFILSHPRL
Trigger: GAGTCTCGGGTGACTCAATATGAAAGGGACTTCGAGAGGATTTCAACAGTGGTCCGAAAAGAAGTGATACGGTTTGAGAAAGAGAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR GCA 90 bp ATCACCCAACTTTATCACAAGATGCAGTTATCGGCAGGTGACACATaGACCAGAAGACAGGCTTCAGTTGTTCTTGTCCATTTATCTCAG +
Preference number: 1 (lower is better)
Translates to: ITQLYHKMQLSAGDT*TRRQASVVLVHLSQ
Trigger: CTGAGATAAATGGACAAGAACAACTGAAGCCTGTCTTCTGGTGCATGTGTCACCTGCCGATAACTGCATCTTGTGATAAAGTTGGGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR TCA 90 bp ACTGTAAATCACCCAACTTTATCACAAGATGCAGTTATCGGCAGGTaGCACATGCACCAGAAGACAGGCTTCAGTTGTTCTTGTCCATTT +
Preference number: 1 (lower is better)
Translates to: TVNHPTLSQDAVIGR*HMHQKTGFSCSCPF
Trigger: AAATGGACAAGAACAACTGAAGCCTGTCTTCTGGTGCATGTGTCACCTGCCGATAACTGCATCTTGTGATAAAGTTGGGTGATTTACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 90 bp GGCTTCAGTTTTTGCAACTGTAAACAGTGCTATGACGGGCATTTCTaGTTAGTCATCTTCAAGGATTTGGTTTCTAGAAGTGCCTATGAG +
Preference number: 1 (lower is better)
Translates to: GFSFCNCKQCYDGHF*LVIFKDLVSRSAYE
Trigger: CTCATAGGCACTTCTAGAAACCAAATCCTTGAAGATGACTAACCAGAAATGCCCGTCATAGCACTGTTTACAGTTGCAAAAACTGAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR GCA 90 bp TCATTTAATCCCCTCCTGATGGACATTTCAATTGGCTTCAGTTTTTaGAACTGTAAACAGTGCTATGACGGGCATTTCTGGTTAGTCATC +
Preference number: 1 (lower is better)
Translates to: SFNPLLMDISIGFSF*NCKQCYDGHFWLVI
Trigger: GATGACTAACCAGAAATGCCCGTCATAGCACTGTTTACAGTTGCAAAAACTGAAGCCAATTGAAATGTCCATCAGGAGGGGATTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR GCA 90 bp CTGATGGACATTTCAATTGGCTTCAGTTTTTGCAACTGTAAACAGTaGTATGACGGGCATTTCTGGTTAGTCATCTTCAAGGATTTGGTT +
Preference number: 1 (lower is better)
Translates to: LMDISIGFSFCNCKQ*YDGHFWLVIFKDLV
Trigger: AACCAAATCCTTGAAGATGACTAACCAGAAATGCCCGTCATAGCACTGTTTACAGTTGCAAAAACTGAAGCCAATTGAAATGTCCATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR GCA 90 bp TACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTaGTGGTATTTTTGTGTAGGCGACAATTCTTATTCCCGTTTCTCT +
Preference number: 1 (lower is better)
Translates to: YRSIQNENLLGRVNS*WYFCVGDNSYSRFS
Trigger: AGAGAAACGGGAATAAGAATTGTCGCCTACACAAAAATACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
3UTR CCA 90 bp AGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTaGTATTTTTGTGTAGGCGACAATTCTTATTCCCGTTTCTCTCAT +
Preference number: 1 (lower is better)
Translates to: RSIQNENLLGRVNSC*YFCVGDNSYSRFSH
Trigger: ATGAGAGAAACGGGAATAAGAATTGTCGCCTACACAAAAATACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
3UTR TCA 90 bp GTCATGGTAATGAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTaGGAGACACACGTTTACAAATGTAACATGATCCTGCACAAGGTA +
Preference number: 1 (lower is better)
Translates to: VMVMKDKRKLRNLQY*ETHVYKCNMILHKV
Trigger: TACCTTGTGCAGGATCATGTTACATTTGTAAACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTCATTACCATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR CCA 90 bp ATCCAACAACAAGGGATGAATCAAAATTATGGTACAGTCACCCTATaGATGCCTTCAAATTACACAGCTTTACAGATCAACTTTGTGAAG +
Preference number: 1 (lower is better)
Translates to: IQQQGMNQNYGTVTL*MPSNYTALQINFVK
Trigger: CTTCACAAAGTTGATCTGTAAAGCTGTGTAATTTGAAGGCATCCATAGGGTGACTGTACCATAATTTTGATTCATCCCTTGTTGTTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR TCA 90 bp AAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTaGGGATGTGTTTTGATGGGTGACAAAAATAGGTTTAGTTATATA +
Preference number: 1 (lower is better)
Translates to: KHQVIIRPSHLHTVY*GCVLMGDKNRFSYI
Trigger: TATATAACTAAACCTATTTTTGTCACCCATCAAAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR TCA 90 bp AATATTCAACGGTGTAACTGTACCATAATTCATTTAATCCCCTCCTaGTGGACATTTCAATTGGCTTCAGTTTTTGCAACTGTAAACAGT +
Preference number: 1 (lower is better)
Translates to: NIQRCNCTIIHLIPS*WTFQLASVFATVNS
Trigger: ACTGTTTACAGTTGCAAAAACTGAAGCCAATTGAAATGTCCATCAGGAGGGGATTAAATGAATTATGGTACAGTTACACCGTTGAATATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CAA 90 bp CCACAGCAGCCGAGCCTCGGCCTCCCGCTTCTTCTGCAGTGTGGCTaGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAA +
Preference number: 2 (lower is better)
Translates to: PQQPSLGLPLLLQCG*GILPALPCLHALVE
Trigger: TTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGCCGAGGCTCGGCTGCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR CAA 90 bp TCCCACTCGAGGATCTCGTCCTTGGCCTGCTGCAGCTTATCAGGCTaGTTGGCCCACAGCAGCCGAGCCTCGGCCTCCCGCTTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: SHSRISSLACCSLSG*LAHSSRASASRFFC
Trigger: GCAGAAGAAGCGGGAGGCCGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR CAA 90 bp CTCACCTCGAGGATCTCGTCCTTGGCCTGCTGCAGCTTATCAGGCTaGTTGGCCCACAGCAGCCGAGCCTCGGCCTCCCGCTTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: LTSRISSLACCSLSG*LAHSSRASASRFFC
Trigger: GCAGAAGAAGCGGGAGGCCGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR CAA 90 bp CACTCGAGGATCTCGTCCTTGGCCTGCTGCAGCTTATCAGGCTTGTaGGCCCACAGCAGCCGAGCCTCGGCCTCCCGCTTCTTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: HSRISSLACCSLSGL*AHSSRASASRFFCS
Trigger: ACTGCAGAAGAAGCGGGAGGCCGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR CAA 90 bp ACCTCGAGGATCTCGTCCTTGGCCTGCTGCAGCTTATCAGGCTTGTaGGCCCACAGCAGCCGAGCCTCGGCCTCCCGCTTCTTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: TSRISSLACCSLSGL*AHSSRASASRFFCS
Trigger: ACTGCAGAAGAAGCGGGAGGCCGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR CAA 90 bp CCTGTGGGGTTCCAAACCTCTGGGTGGGATGGGCCCTGGGTTCATTaGGAACCAGCAGAACACCCCTGGCTGGGCTGCCTCAGTGGACTC +
Preference number: 2 (lower is better)
Translates to: PVGFQTSGWDGPWVH*EPAEHPWLGCLSGL
Trigger: GAGTCCACTGAGGCAGCCCAGCCAGGGGTGTTCTGCTGGTTCCAAATGAACCCAGGGCCCATCCCACCCAGAGGTTTGGAACCCCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR-3UTR GCA 90 bp TCTGGAAGGGAGGTGGCCCTGCCTCATATGCTAGCTGTCCCCAGGGTGCTGGCGCCACTGGGCAACCCCTaGCCATCTGGGGAAAGAATG +
Preference number: 2 (lower is better)
Translates to: SGREVALPHMLAVPRVLAPLGNP*PSGERM
Trigger: CATTCTTTCCCCAGATGGGCAGGGGTTGCCCAGTGG...CGCCAGCACCCTGGGGACAGCTAGCATATGAGGCAGGGCCACCTCCCTTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558040.5
3UTR-3UTR CCA 90 bp TGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGGCTCTTGCTGGCAGGCTGACCTGGGGCCCCAGTaGCAGGAGCGTCTTTGGGAT +
Preference number: 2 (lower is better)
Translates to: CEHPLAVCATPEGSCWQADLGPQ*QERLWD
Trigger: ATCCCAAAGACGCTCCTGCCACTGGGGCCCCAGGTC...AGCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp GGCTTCCTCAGCAGCCACGGCCCTTTAGACTCAATCAGCGCTCTTCCCCCTGTGGCTTCTTCTGCAGTGTaGCTTGGGCATCCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: GFLSSHGPLDSISALPPVASSAV*LGHPAS
Trigger: GCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGC...CACAGGGGGAAGAGCGCTGATTGAGTCTAAAGGGCCGTGGCTGCTGAGGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR-3UTR CCA 90 bp GGCCCTGCCTCATATGCTAGCTGTCCCCAGGGTGCTGGCGGTGGCTTCTCAGCACAACCCCTGCCCATCTaGGGAAAGAATGTCTTGCAG +
Preference number: 2 (lower is better)
Translates to: GPASYASCPQGAGGGFSAQPLPI*GKNVLQ
Trigger: CTGCAAGACATTCTTTCCCCAGATGGGCAGGGGTTG...TGCTGAGAAGCCACCGCCAGCACCCTGGGGACAGCTAGCATATGAGGCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558040.5
3UTR-3UTR CCA 90 bp CCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGCGGACTATGGCCAGAGACTCTTTGCAAACTaGGCTGTGTTCAGCGCTAGC +
Preference number: 2 (lower is better)
Translates to: PALPCLHALVEGSADYGQRLFAN*AVFSAS
Trigger: GCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCT...CTGGCCATAGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR-3UTR TCA 90 bp CCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGCGGACTATGGCCAGACAATGAAGCCATTCTaGGAGTGCTTCTCGGAAAGC +
Preference number: 2 (lower is better)
Translates to: PALPCLHALVEGSADYGQTMKPF*ECFSES
Trigger: GCTTTCCGAGAAGCACTCTCAGAATGGCTTCATTGT...CTGGCCATAGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR-3UTR TCA 90 bp GCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGCGGACTATGGCCAGGAGGCACAATGAAGCCATTCTaGGAGTGCTTCTCGGAAAGC +
Preference number: 2 (lower is better)
Translates to: AAMSSCAGRRQRGLWPGGTMKPF*ECFSES
Trigger: GCTTTCCGAGAAGCACTCTCAGAATGGCTTCATTGT...GCCTCCTGGCCATAGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR-3UTR CCA 90 bp TGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGGCTCTTGCTGGCAGGCTGCTTCTTCTGCAGTGTaGCTTGGGCATCCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: CEHPLAVCATPEGSCWQAASSAV*LGHPAS
Trigger: GCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGC...AGCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR CCA 90 bp GGGATCACACCAGCTCGAAGTCCAGTCCTCATCTTCAGCACTCCGGAGCCCAAACAAAGTCCTCCCTCCTaGGTCCCCAGCTGGAATACC +
Preference number: 2 (lower is better)
Translates to: GITPARSPVLIFSTPEPKQSPPS*VPSWNT
Trigger: GGTATTCCAGCTGGGGACCCAGGAGGGAGGACTTTG...TTTGGGCTCCGGAGTGCTGAAGATGAGGACTGGACTTCGAGCTGGTGTGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp CTCAGTGGACTCACCTCGAGGATCTCGTCCTTGGCCTGCTGCAGCTTATCAGGCGGTACCCACGGCACGTaGCAGCTACAAGACCAAGAA +
Preference number: 2 (lower is better)
Translates to: LSGLTSRISSLACCSLSGGTHGT*QLQDQE
Trigger: TTCTTGGTCTTGTAGCTGCCACGTGCCGTGGGTACC...GCCTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGGTGAGTCCACTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR-3UTR CCA 90 bp GCCTCGAGGTCTGGAAGGGAGGTGGCCCTGCCTCATATGCTAGCTGTCCCCAGGAGGTGGGTATCCAAATaGGACTTGTCCTTAACAGGC +
Preference number: 2 (lower is better)
Translates to: ASRSGREVALPHMLAVPRRWVSK*DLSLTG
Trigger: GCCTGTTAAGGACAAGTCCCATTTGGATACCCACCT...CCTGGGGACAGCTAGCATATGAGGCAGGGCCACCTCCCTTCCAGACCTCGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558040.5
3UTR CAA 90 bp TCTTCCACCTCAGCCAGCTGGGAGAGTGCCCGTGACAATGCCGTGTaGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTTGCAAACTGG +
Preference number: 2 (lower is better)
Translates to: SSTSASWESARDNAV*SSELPSMARLFANW
Trigger: CCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACACGGCATTGTCACGGGCACTCTCCCAGCTGGCTGAGGTGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR-3UTR TCA 90 bp CTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCTGTGTGTGCAACTCCTaGGGGCTCTTGCTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: LALPLVLHLCTGNQNVYCCVCNS*GLLLAG
Trigger: GCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACA...GCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR GCA 90 bp CTCCACAAAGTCCTCCCTCCTGGGTCCCCAGCTGGAATACCACCTTCTTCCTTTTGGCCCTTCCCCTGGTaGTGCATCTGTGTACAGGGA +
Preference number: 2 (lower is better)
Translates to: LHKVLPPGSPAGIPPSSFWPFPW*CICVQG
Trigger: TCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCA...AAAGGAAGAAGGTGGTATTCCAGCTGGGGACCCAGGAGGGAGGACTTTGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR GCA 90 bp GCCCTGCCTCATATGCTAGCTGTCCCCAGGGTGCTGGCGGTGGCTTCTCAGCAAGCTACTCACCAAAGATaGTTCTGTCTTCCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: ALPHMLAVPRVLAVASQQATHQR*FCLPAS
Trigger: AGAGGCTGGAAGACAGAAGCATCTTTGGTGAGTAGC...TTGCTGAGAAGCCACCGCCAGCACCCTGGGGACAGCTAGCATATGAGGCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558040.5
3UTR-3UTR CCA 90 bp ACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGGACCTGGGGCCCCAGTaGCAGGAGCGTCTTTGGGAT +
Preference number: 2 (lower is better)
Translates to: TGPSPGAASVYRESECLLDLGPQ*QERLWD
Trigger: ATCCCAAAGACGCTCCTGCCACTGGGGCCCCAGGTC...CAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp TGGCTTGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCAGAGCTCCCAAGCATaGCTAGACTCTTTGCAAACT +
Preference number: 2 (lower is better)
Translates to: WLGHPASAAMSSCAGRRQQSSQA*LDSLQT
Trigger: AGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTG...CTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR-3UTR CCA 90 bp CTGCCTCATATGCTAGCTGTCCCCAGGGTGCTGGCGGTGGCTTCTCAGCAAGTGGCTTACCAGGTCAGGTaGGTATCCAAATGGGACTTG +
Preference number: 2 (lower is better)
Translates to: LPHMLAVPRVLAVASQQVAYQVR*VSKWDL
Trigger: CAAGTCCCATTTGGATACCCACCTGACCTGGTAAGC...CACTTGCTGAGAAGCCACCGCCAGCACCCTGGGGACAGCTAGCATATGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558040.5
3UTR-3UTR CCA 90 bp GCCTCGAGGTCTGGAAGGGAGGTGGCCCTGCCTCATATGCTAGCTGTCCCCAGGTGGCTTCTCAGCAAGTaGAGTTTTTCATGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: ASRSGREVALPHMLAVPRWLLSK*SFSCLP
Trigger: TGGCAGACATGAAAAACTCCACTTGCTGAGAAGCCA...CCTGGGGACAGCTAGCATATGAGGCAGGGCCACCTCCCTTCCAGACCTCGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558040.5
3UTR-3UTR TCA 90 bp GGCCTCCCCTCCACCTACAGATTCTTTCCTGTGGCCTCAGCAGTGAGGCACCCTCAGAGGAGGAAGTTCTaGAACCAGAGGAGACATCAT +
Preference number: 2 (lower is better)
Translates to: GLPSTYRFFPVASAVRHPQRRKF*NQRRHH
Trigger: ATGATGTCTCCTCTGGTTTCAGAACTTCCTCCTCTG...AGGGTGCCTCACTGCTGAGGCCACAGGAAAGAATCTGTAGGTGGAGGGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp CAAAGGAGCTTCAAAGCCCACTCTGACCAGTATAGCTTGAGCAGCTGTGGACACGACTCTGGCCTCCCCTaGCTAGACCGGCAGAGATCT +
Preference number: 2 (lower is better)
Translates to: QRSFKAHSDQYSLSSCGHDSGLP*LDRQRS
Trigger: AGATCTCTGCCGGTCTAGCCAGGGGAGGCCAGAGTC...GTGTCCACAGCTGCTCAAGCTATACTGGTCAGAGTGGGCTTTGAAGCTCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR CAA 90 bp CCATCTGCCCCAAACCTATTGCCTCATGTGTTACAAAGGGTTTCATaGTCTGCCCAGTGTCTGGGCCAGAAGCTTGCGGGGCATCCTAGC +
Preference number: 2 (lower is better)
Translates to: PSAPNLLPHVLQRVS*SAQCLGQKLAGHPS
Trigger: GCTAGGATGCCCCGCAAGCTTCTGGCCCAGACACTGGGCAGACAATGAAACCCTTTGTAACACATGAGGCAATAGGTTTGGGGCAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp TCAGGAGCTCTTGGATCACCCTATCTAGAGGCAGAGGGCATGGCTTTCATGTCTCTTTTGTCATCCCTATaGGGCTCTTCTCCGGGGGCG +
Preference number: 2 (lower is better)
Translates to: SGALGSPYLEAEGMAFMSLLSSL*GSSPGA
Trigger: CGCCCCCGGAGAAGAGCCTCATAGGGATGACAAAAG...AGACATGAAAGCCATGCCCTCTGCCTCTAGATAGGGTGATCCAAGAGCTCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR TCA 90 bp CAAACCTCTGGGTGGGATGGGCCCTGGGTTCATTTGGAACCAGCAGAACACCCCTTTCCAAGAACTCTCTaGCGTCAGGGTCCTGTAACA +
Preference number: 2 (lower is better)
Translates to: QTSGWDGPWVHLEPAEHPFPRTL*RQGPVT
Trigger: TGTTACAGGACCCTGACGTCAGAGAGTTCTTGGAAA...GGGGTGTTCTGCTGGTTCCAAATGAACCCAGGGCCCATCCCACCCAGAGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR-3UTR CCA 90 bp ACATCCAGGCATGTGCGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCTGGCAGGCTACCTCCTaGGCACAGACAGTAGAGCTT +
Preference number: 2 (lower is better)
Translates to: TSRHVRTVAQMCPPMFGAWQATS*AQTVEL
Trigger: AAGCTCTACTGTCTGTGCCCAGGAGGTAGCCTGCCA...GGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCGCACATGCCTGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp TGGCCTCCCCTGGCTAGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTCTTCACACAGTCTACTaGGGATGTGTTTTGATGGGT +
Preference number: 2 (lower is better)
Translates to: WPPLARPAEICVNTLWLCLHTVY*GCVLMG
Trigger: ACCCATCAAAACACATCCTCAGTAGACTGTGTGAAG...ACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCTAGCCAGGGGAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp TGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCAAGCCCATCCTTGACTaGCGAGACTCTGGCCTCCCC +
Preference number: 2 (lower is better)
Translates to: CPFISDQARPCPNMEQRIKPILD*RDSGLP
Trigger: GGGGAGGCCAGAGTCTCGTCAGTCAAGGATGGGCTT...GATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp CACCTGTTAAAAAGAAATACTTGCACCACTGGCCCTTCCCCTGGTGCTGCATCTCCCACCAAAGAGAACTaGTACAGCAGGACCTGGGGC +
Preference number: 2 (lower is better)
Translates to: HLLKRNTCTTGPSPGAASPTKEN*YSRTWG
Trigger: GCCCCAGGTCCTGCTGTATCAGTTCTCTTTGGTGGG...AGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAGTATTTCTTTTTAACAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp CTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAGGTTCCATACCTTTTCTCAGAACAGGTAGCTaGGGTAGGCGGAGAGAAAGA +
Preference number: 2 (lower is better)
Translates to: LRSPNAELAKGKAGSIPFLRTGS*GRRRER
Trigger: TCTTTCTCTCCGCCTACCTCAGCTACCTGTTCTGAG...AAAAGGTATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR GCA 90 bp TGGCTTGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGAAAGAGAAAGGCTCTTaGTTAATGATAGGGACACCA +
Preference number: 2 (lower is better)
Translates to: WLGHPASAAMSSCAGRRQKEKGS*LMIGTP
Trigger: TGGTGTCCCTATCATTAAGCAAGAGCCTTTCTCTTT...CTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR GCA 90 bp TCAGCACTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAGGTTCCATATTAGGAGATGGCCTTTaGCTCAGGAAGGAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: SALRSPNAELAKGKAGSILGDGL*LRKEGF
Trigger: GAAGCCTTCCTTCCTGAGGCAAAGGCCATCTCCTAA...TATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR GCA 90 bp CCTCTGCTACTACTCCACTGGGCAACCCCTGCCCATCTGGGGAAAGAATGTCTTTCAGAGAAGCTCCAATaGTTACCAGGTCAGGTGGGT +
Preference number: 2 (lower is better)
Translates to: PLLLLHWATPAHLGKECLSEKLQ*LPGQVG
Trigger: ACCCACCTGACCTGGTAAGCATTGGAGCTTCTCTGA...AAGACATTCTTTCCCCAGATGGGCAGGGGTTGCCCAGTGGAGTAGTAGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558040.5
3UTR-3UTR CCA 90 bp CAGGCATGTGCGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGAAGGTTCAGGAGCTCTTaGATCACCCTATCTAGAGGC +
Preference number: 2 (lower is better)
Translates to: QACAHCSTDVSSYVWSQGRFRSS*ITLSRG
Trigger: GCCTCTAGATAGGGTGATCCAAGAGCTCCTGAACCT...TCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCGCACATGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp CTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCGTTTTCTTGGGATGGAGGGGCTaGAGGTGGCAAGGCTCCCAT +
Preference number: 2 (lower is better)
Translates to: LPLVLHLCTGNQNVYCVFLGWRG*RWQGSH
Trigger: ATGGGAGCCTTGCCACCTCCAGCCCCTCCATCCCAA...GAAAACGCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp GGCCTCCCCTCCACCTACAGATTCTTTCCTGTGGCCTCAGCAGTGAGGCACCCTACTGAGGATGTGTTTTaGTGGGTGACAAAAATAGGT +
Preference number: 2 (lower is better)
Translates to: GLPSTYRFFPVASAVRHPTEDVF*WVTKIG
Trigger: ACCTATTTTTGTCACCCATCAAAACACATCCTCAGT...AGGGTGCCTCACTGCTGAGGCCACAGGAAAGAATCTGTAGGTGGAGGGGAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp GTACAGGGAATCAGAATGTTTACTGCGTTTTCTTGTCTCAGGTTGCCTCGCCCCCGGCAGAGATCTGTGTaGACACCCTTTGGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: VQGIRMFTAFSCLRLPRPRQRSV*TPFGCV
Trigger: CACACAGCCAAAGGGTGTTCACACAGATCTCTGCCG...GGGGCGAGGCAACCTGAGACAAGAAAACGCAGTAAACATTCTGATTCCCTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR CAA 90 bp TTGATGGTCATTTTGCTGACGGCATCTGTGGCTTTGTTGAACATCTaGAGGAGACCAGCACCACTCAATGTCTGGGTACCCACGGCACGT +
Preference number: 2 (lower is better)
Translates to: LMVILLTASVALLNI*RRPAPLNVWVPTAR
Trigger: ACGTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGCCACAGATGCCGTCAGCAAAATGACCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR-3UTR TCA 90 bp GTACAGGGAATCAGAATGTTTACTGCGTTTTCTTGTCTCAGGTTGCCTCGCCCCCTGACCAGTATAGCTTaGGCAGCTGTGGACACAGCT +
Preference number: 2 (lower is better)
Translates to: VQGIRMFTAFSCLRLPRPLTSIA*AAVDTA
Trigger: AGCTGTGTCCACAGCTGCTCAAGCTATACTGGTCAG...GGGGCGAGGCAACCTGAGACAAGAAAACGCAGTAAACATTCTGATTCCCTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp TGGCCTCCCCTGGCTAGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTCAAACTGTTTGCTTCTaGACAATGGTAAGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: WPPLARPAEICVNTLWLCQTVCF*TMVSLS
Trigger: AGACAAGCTTACCATTGTTCAGAAGCAAACAGTTTG...ACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCTAGCCAGGGGAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR TCA 90 bp GCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGACCCAGAAAGTCACTGGGGCGGAGGGACAATaGAGCCATTCTGAGAGTGCT +
Preference number: 2 (lower is better)
Translates to: AILRVLLGKLLIKTQKVTGAEGQ*SHSESA
Trigger: AGCACTCTCAGAATGGCTTCATTGTCCCTCCGCCCC...AGTGACTTTCTGGGTCTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559389.1
3UTR-3UTR TCA 90 bp TCAGCACTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAGGTTCCATAAATGGCTTGCAACTCTaGGTAAAACAGGAATCCCTG +
Preference number: 2 (lower is better)
Translates to: SALRSPNAELAKGKAGSINGLQL*VKQESL
Trigger: CAGGGATTCCTGTTTTACTCAGAGTTGCAAGCCATT...TATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR GCA 90 bp ACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGTTTCTTGTCTCAGGTTaGCTCGCCCCAAACCTTAGC +
Preference number: 2 (lower is better)
Translates to: TGPSPGAASVYRESECLLFLVSG*LAPNLS
Trigger: GCTAAGGTTTGGGGCGAGGCAACCTGAGACAAGAAA...CAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR GCA 90 bp TGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCCCCTTCCCCTGGTGCTaGATCTGTGTACAGGGAATC +
Preference number: 2 (lower is better)
Translates to: CPFISDQARPCPNMEQRIPFPWC*ICVQGI
Trigger: GATTCCCTGTACACAGATGCAGCACCAGGGGAAGGG...GATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp ACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGAGGTTCAGGAGCTCTTaGATCACCCTATCTAGAGGC +
Preference number: 2 (lower is better)
Translates to: TGPSPGAASVYRESECLLRFRSS*ITLSRG
Trigger: GCCTCTAGATAGGGTGATCCAAGAGCTCCTGAACCT...CAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp TGGAGACAAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTCCTGAGGGCTCTTGCTaGCAGGCTACCTCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: WRQSIKSLSDLHTFTQSTPEGSC*QATSWA
Trigger: TGCCCAGGAGGTAGCCTGCCAGCAAGAGCCCTCAGG...AGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTTGTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp TTTATCACAAGATGCAGTTATCGGCAGGTGACACATGCACCAGAAGACAGGCTTCGGCAGAGATCTGTGTaGACACCCTTTGGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: FITRCSYRQVTHAPEDRLRQRSV*TPFGCV
Trigger: CACACAGCCAAAGGGTGTTCACACAGATCTCTGCCG...AAGCCTGTCTTCTGGTGCATGTGTCACCTGCCGATAACTGCATCTTGTGATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp GTTCCAAACCTCTGGGTGGGATGGGCCCTGGGTTCATTTGGAACCAGCAGAACAGCTCTTTCCTATGGTTaGCTAGAGTTTCTACAACAG +
Preference number: 2 (lower is better)
Translates to: VPNLWVGWALGSFGTSRTALSYG*LEFLQQ
Trigger: CTGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGC...TGTTCTGCTGGTTCCAAATGAACCCAGGGCCCATCCCACCCAGAGGTTTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR-3UTR TCA 90 bp GGTAATGTGGAAAGCGCCTCCCAGGTCCTATCAGACACCCATGTGATGTGGCTCAGGGAACATTCAAGATaGGCCTGGAACATCTTGTTA +
Preference number: 2 (lower is better)
Translates to: GNVESASQVLSDTHVMWLREHSR*AWNILL
Trigger: TAACAAGATGTTCCAGGCTCATCTTGAATGTTCCCT...GAGCCACATCACATGGGTGTCTGATAGGACCTGGGAGGCGCTTTCCACATTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp TGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGGCTCTTGCTGGCAGGCTTGGCTTTCATGTCTATaGAGACAAAGCATCAAGTCA +
Preference number: 2 (lower is better)
Translates to: CEHPLAVCATPEGSCWQAWLSCL*RQSIKS
Trigger: TGACTTGATGCTTTGTCTCCATAGACATGAAAGCCA...AGCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp ACTCAAAACATGATGGGAGCAAGCTACAAACACACAAGAGGCCGCTATAAATCTTGGCAGGAGCGTCTTTaGGATGGAGGGGCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: TQNMMGASYKHTRGRYKSWQERL*DGGAGG
Trigger: ACCTCCAGCCCCTCCATCCCAAAGACGCTCCTGCCA...AGATTTATAGCGGCCTCTTGTGTGTTTGTAGCTTGCTCCCATCATGTTTTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp CTATTGCCTCATGTGTTACAAAGGGTTTCATTGTCTGCCCAGTGTCTGGGCCAGGAAAAGGGGGCAGACTaGAATAAACCTACAGGGCTG +
Preference number: 2 (lower is better)
Translates to: LLPHVLQRVSLSAQCLGQEKGAD*NKPTGL
Trigger: CAGCCCTGTAGGTTTATTCCAGTCTGCCCCCTTTTC...CTGGCCCAGACACTGGGCAGACAATGAAACCCTTTGTAACACATGAGGCAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp CTATTGCCTCATGTGTTACAAAGGGTTTCATTGTCTGCCCAGTGTCTGGGCCAGGACACCCATGTGATGTaGCTCCTGCTCGTTTTTCTC +
Preference number: 2 (lower is better)
Translates to: LLPHVLQRVSLSAQCLGQDTHVM*LLLVFL
Trigger: GAGAAAAACGAGCAGGAGCCACATCACATGGGTGTC...CTGGCCCAGACACTGGGCAGACAATGAAACCCTTTGTAACACATGAGGCAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp AATGCTTCACATCTCCTTACACTTATATTCCCATCTAGGGCATTGGAAAATGCCTCTATGGGCTTCCCGTaGGCCCTGAGTGTGCTCGGC +
Preference number: 2 (lower is better)
Translates to: NASHLLTLIFPSRALENASMGFP*ALSVLG
Trigger: GCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGA...GGCATTTTCCAATGCCCTAGATGGGAATATAAGTGTAAGGAGATGTGAAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CAA 90 bp TATCGGCAGGTGACACATGCACCAGAAGACAGGCTTCAGTTGTTCTaGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGA +
Preference number: 2 (lower is better)
Translates to: YRQVTHAPEDRLQLF*SIYLRSGTTLSKHG
Trigger: TCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAACAACTGAAGCCTGTCTTCTGGTGCATGTGTCACCTGCCGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CAA 90 bp TGCAGTTATCGGCAGGTGACACATGCACCAGAAGACAGGCTTCAGTaGTTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAA +
Preference number: 2 (lower is better)
Translates to: CSYRQVTHAPEDRLQ*FLSIYLRSGTTLSK
Trigger: TTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAACAACTGAAGCCTGTCTTCTGGTGCATGTGTCACCTGCCGATAACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp AATGCTTCACATCTCCTTACACTTATATTCCCATCTAGGGCATTGGAAAATGCCCTGGGAGAGTGCCCGTaGCAATGCCGTGTTGTCCTC +
Preference number: 2 (lower is better)
Translates to: NASHLLTLIFPSRALENALGECP*QCRVVL
Trigger: GAGGACAACACGGCATTGTCACGGGCACTCTCCCAG...GGCATTTTCCAATGCCCTAGATGGGAATATAAGTGTAAGGAGATGTGAAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR TCA 90 bp GGTAATGTGGAAAGCGCCTCCCAGGTCCTATCAGACACCCATGTGATGTGGCTCGCAGCACAAAACTTGTaGACGGTAGAGAAAAACTTA +
Preference number: 2 (lower is better)
Translates to: GNVESASQVLSDTHVMWLAAQNL*TVEKNL
Trigger: TAAGTTTTTCTCTACCGTTCACAAGTTTTGTGCTGC...GAGCCACATCACATGGGTGTCTGATAGGACCTGGGAGGCGCTTTCCACATTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR GCA 90 bp AGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGAAAGAGAAAGGCTCTTaGTTAATGATAGGGACACCA +
Preference number: 2 (lower is better)
Translates to: RPAEICVNTLWLCVQLLRKEKGS*LMIGTP
Trigger: TGGTGTCCCTATCATTAAGCAAGAGCCTTTCTCTTT...CCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR GCA 90 bp CTTGCACCACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTATATATAAGACTTaGCATCAGAGGGCAAGACTC +
Preference number: 2 (lower is better)
Translates to: LAPLALPLVLHLCTGNQNVIYKT*HQRARL
Trigger: GAGTCTTGCCCTCTGATGGCAAGTCTTATATATAAC...ATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR GCA 90 bp TTACACCTTTTAGACTCAGTTCAAGCATCAGGTTCTCCACAAAGTCCTCCCTCCAGTTTCCGTAAGCGCTaGTCCTCACACTCTACCTCC +
Preference number: 2 (lower is better)
Translates to: LHLLDSVQASGSPQSPPSSFRKR*SSHSTS
Trigger: GGAGGTAGAGTGTGAGGAGCAGCGCTTACGGAAACT...GGAGGGAGGACTTTGTGGAGAACCTGATGCTTGAACTGAGTCTAAAAGGTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR CCA 90 bp GTTGTTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCTGTGTGAACACCCTTTaGCTGTGTGTGCAACTCCTG +
Preference number: 2 (lower is better)
Translates to: VVLVHLSQIRHDPVQTWSCVNTL*LCVQLL
Trigger: CAGGAGTTGCACACACAGCCAAAGGGTGTTCACACA...GCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp CTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGACTCTGGCCTCCCCTaGCTAGACCGGCAGAGATCT +
Preference number: 2 (lower is better)
Translates to: LATGAFRMKIFWEELTVADSGLP*LDRQRS
Trigger: AGATCTCTGCCGGTCTAGCCAGGGGAGGCCAGAGTC...AGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp CCAAAGTTGATGGTAAGGATACTGAGGGGTAGGGAGAGTGACTTTTTCCAAAAAAGGCAGCGCGGACTATaGCCAGGAGGCGAATGTAGT +
Preference number: 2 (lower is better)
Translates to: PKLMVRILRGRESDFFQKRQRGL*PGGECS
Trigger: ACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCT...TTTTTGGAAAAAGTCACTCTCCCTACCCCTCAGTATCCTTACCATCAACTTTGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR TCA 90 bp CTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCGTTTTCTTTCCAAGAACTCTCTaGCGTCAGGGTCCTGTAACA +
Preference number: 2 (lower is better)
Translates to: LPLVLHLCTGNQNVYCVFFPRTL*RQGPVT
Trigger: TGTTACAGGACCCTGACGTCAGAGAGTTCTTGGAAA...GAAAACGCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR CCA 90 bp CCAAAGTTGATGGTAAGGATACTGAGGGGTAGGGAGAGTGACTTTTTCCAAAAATGGCAGGCTACCTCCTaGGCACAGACAGTAGAGCTT +
Preference number: 2 (lower is better)
Translates to: PKLMVRILRGRESDFFQKWQATS*AQTVEL
Trigger: AAGCTCTACTGTCTGTGCCCAGGAGGTAGCCTGCCA...TTTTTGGAAAAAGTCACTCTCCCTACCCCTCAGTATCCTTACCATCAACTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp GGTAATGAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTTGGCAGGAGCGTCTTTaGGATGGAGGGGCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: GNERQKKVEESAVLRDTRWQERL*DGGAGG
Trigger: ACCTCCAGCCCCTCCATCCCAAAGACGCTCCTGCCA...ACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTCATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp CTGATGGACATTTCAATTGGCTTCAGTTTTTGCAACTGTAAACAGTGCTATGACGCACCACTCAATGTCTaGGTACCCACGGCACGTGGC +
Preference number: 2 (lower is better)
Translates to: LMDISIGFSFCNCKQCYDAPLNV*VPTARG
Trigger: GCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGC...GTCATAGCACTGTTTACAGTTGCAAAAACTGAAGCCAATTGAAATGTCCATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR TCA 90 bp ACATTTGCAATCAGTTTCCATGAGGTGTCGGCGCTGTTGGGAAGGACTGGGAGAAAAACAAACAACCCCTaGCCAAGAATCCAACAACAA +
Preference number: 2 (lower is better)
Translates to: TFAISFHEVSALLGRTGRKTNNP*PRIQQQ
Trigger: TTGTTGTTGGATTCTTGGTCAGGGGTTGTTTGTTTT...TCTCCCAGTCCTTCCCAACAGCGCCGACACCTCATGGAAACTGATTGCAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp ACATTTGCAATCAGTTTCCATGAGGTGTCGGCGCTGTTGGGAAGGACTGGGAGAAGGAATCTGCAGTATTaGGAGACACACGTTTACAAA +
Preference number: 2 (lower is better)
Translates to: TFAISFHEVSALLGRTGRRNLQY*ETHVYK
Trigger: TTTGTAAACGTGTGTCTCTCAATACTGCAGATTCCT...TCTCCCAGTCCTTCCCAACAGCGCCGACACCTCATGGAAACTGATTGCAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR GCA 90 bp CAAAGGAGCTTCAAAGCCCACTCTGACCAGTATAGCTTGAGCAGCTGTGGACACAGTCTCTGCCTCCTTTaGAGGAGAATAGGTTTTAAT +
Preference number: 2 (lower is better)
Translates to: QRSFKAHSDQYSLSSCGHSLCLL*RRIGFN
Trigger: ATTAAAACCTATTCTCCTGCAAAGGAGGCAGAGACT...GTGTCCACAGCTGCTCAAGCTATACTGGTCAGAGTGGGCTTTGAAGCTCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp ACCCTATGGATGCCTTCAAATTACACAGCTTTACAGATCAACTTTGTGAAGATATTGGGATGGAGGGGCTaGAGGTGGCAAGGCTCCCAT +
Preference number: 2 (lower is better)
Translates to: TLWMPSNYTALQINFVKILGWRG*RWQGSH
Trigger: ATGGGAGCCTTGCCACCTCCAGCCCCTCCATCCCAA...TATCTTCACAAAGTTGATCTGTAAAGCTGTGTAATTTGAAGGCATCCATAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp GGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCAGACCTTCGGAAGAAGTCATTGTTaGCCTGTTCCTGGTGGAGCT +
Preference number: 2 (lower is better)
Translates to: GHGFHVYGDKASSHYQTFGRSHC*PVPGGA
Trigger: AGCTCCACCAGGAACAGGCCAACAATGACTTCTTCC...GAAGGTCTGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR CCA 90 bp TTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTAGCCCTAAAGACAACTaGCCCCGCCAGCCTCAGGAT +
Preference number: 2 (lower is better)
Translates to: FLATGAFRMKIFWEELTVSPKDN*PRQPQD
Trigger: ATCCTGAGGCTGGCGGGGCCAGTTGTCTTTAGGGCT...AACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp AACAATCATTCAACAGTTATCTATTTGACACCTGTTTTGAGCCTGAACCTTTGCCCCACCAAAGAGAACTaGTACAGCAGGACCTGGGGC +
Preference number: 2 (lower is better)
Translates to: NNHSTVIYLTPVLSLNLCPTKEN*YSRTWG
Trigger: GCCCCAGGTCCTGCTGTATCAGTTCTCTTTGGTGGG...GCAAAGGTTCAGGCTCAAAACAGGTGTCAAATAGATAACTGTTGAATGATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp CTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCGTTTTCGCTCTTTCCTATGGTTaGCTAGAGTTTCTACAACAG +
Preference number: 2 (lower is better)
Translates to: LPLVLHLCTGNQNVYCVFALSYG*LEFLQQ
Trigger: CTGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGC...GAAAACGCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR CCA 90 bp AAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTGTGAACACCCTTTaGCTGTGTGTGCAACTCCTG +
Preference number: 2 (lower is better)
Translates to: KASSHYQTFTPSHSLLRMCVNTL*LCVQLL
Trigger: CAGGAGTTGCACACACAGCCAAAGGGTGTTCACACA...CATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp GGTAATGAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTCGAGGATCTCGTCCTTaGCCTGCTGCAGCTTATCAG +
Preference number: 2 (lower is better)
Translates to: GNERQKKVEESAVLRDTRRGSRP*PAAAYQ
Trigger: CTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCG...ACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTCATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR CCA 90 bp AATGCTTCACATCTCCTTACACTTATATTCCCATCTAGGGCATTGGAAAATGCCCAGTCTCACGCCTTCTaGTGTGTCCAGATCACGAAG +
Preference number: 2 (lower is better)
Translates to: NASHLLTLIFPSRALENAQSHAF*CVQITK
Trigger: CTTCGTGATCTGGACACACCAGAAGGCGTGAGACTG...GGCATTTTCCAATGCCCTAGATGGGAATATAAGTGTAAGGAGATGTGAAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp AGTTGCTGGTATTTTTGTGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTACTCCATGGGCCTCACTaGCTTTACCCTACACCAAGC +
Preference number: 2 (lower is better)
Translates to: SCWYFCVGDNSYSRFSHLLHGPH*LYPTPS
Trigger: GCTTGGTGTAGGGTAAAGTCAGTGAGGCCCATGGAG...TAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACACAAAAATACCAGCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR GCA 90 bp CTATTGCCTCATGTGTTACAAAGGGTTTCATTGTCTGCCCAGTGTCTGGGCCAGAGCTCTTTACAAAAATaGACAAGCCCTAAAGACAAC +
Preference number: 2 (lower is better)
Translates to: LLPHVLQRVSLSAQCLGQSSLQK*TSPKDN
Trigger: GTTGTCTTTAGGGCTTGTGCATTTTTGTAAAGAGCT...CTGGCCCAGACACTGGGCAGACAATGAAACCCTTTGTAACACATGAGGCAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp TGTTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGTGGCTTTCATGTCTATaGAGACAAAGCATCAAGTCA +
Preference number: 2 (lower is better)
Translates to: CSCPFISDQARPCPNMEQWLSCL*RQSIKS
Trigger: TGACTTGATGCTTTGTCTCCATAGACATGAAAGCCA...CTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp ACCCTATGGATGCCTTCAAATTACACAGCTTTACAGATCAACTTTGTGAAGATAAAATACTTGCACCACTaGCCCTTCCCCTGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: TLWMPSNYTALQINFVKIKYLHH*PFPWCC
Trigger: GCAGCACCAGGGGAAGGGCCAGTGGTGCAAGTATTT...TATCTTCACAAAGTTGATCTGTAAAGCTGTGTAATTTGAAGGCATCCATAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp CTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTAATGCAAAAATTAGCTaGGTGTGGGGGCAGGCACCT +
Preference number: 2 (lower is better)
Translates to: LATGAFRMKIFWEELTVANAKIS*VWGQAP
Trigger: AGGTGCCTGCCCCCACACCCAGCTAATTTTTGCATT...AGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CAA 90 bp TGGATTTCTCTTTCTCAAACCGTATCACTTCTTTTCGGACCACTGTaGAAATCCTCTCGAAGTCCCTTTCATATTGAGTCACCCGAGACT +
Preference number: 2 (lower is better)
Translates to: WISLSQTVSLLFGPL*KSSRSPFHIESPET
Trigger: AGTCTCGGGTGACTCAATATGAAAGGGACTTCGAGAGGATTTCAACAGTGGTCCGAAAAGAAGTGATACGGTTTGAGAAAGAGAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR TCA 90 bp TGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCTCCAACAACAAGGGATaGATCAAAATTATGGTACAG +
Preference number: 2 (lower is better)
Translates to: CPFISDQARPCPNMEQRISNNKG*IKIMVQ
Trigger: CTGTACCATAATTTTGATTCATCCCTTGTTGTTGGA...GATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp TTTATCACAAGATGCAGTTATCGGCAGGTGACACATGCACCAGAAGACAGGCTTAAAACAAACAACCCCTaGCCAAGAATCCAACAACAA +
Preference number: 2 (lower is better)
Translates to: FITRCSYRQVTHAPEDRLKTNNP*PRIQQQ
Trigger: TTGTTGTTGGATTCTTGGTCAGGGGTTGTTTGTTTT...AAGCCTGTCTTCTGGTGCATGTGTCACCTGCCGATAACTGCATCTTGTGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp GCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGACCCAGAAAGTCACTACTGTCAAATCAAATTaGTCCTCCTGTTCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: AILRVLLGKLLIKTQKVTTVKSN*SSCSSS
Trigger: GGAAGAAGAACAGGAGGATCAATTTGATTTGACAGT...AGTGACTTTCTGGGTCTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559389.1
3UTR-3UTR TCA 90 bp TTTATCACAAGATGCAGTTATCGGCAGGTGACACATGCACCAGAAGACAGGCTTAAAGTACTCAAAACATaGTGGGAGCAAGCTACAAAC +
Preference number: 2 (lower is better)
Translates to: FITRCSYRQVTHAPEDRLKVLKT*WEQATN
Trigger: GTTTGTAGCTTGCTCCCATCATGTTTTGAGTACTTT...AAGCCTGTCTTCTGGTGCATGTGTCACCTGCCGATAACTGCATCTTGTGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR GCA 90 bp ATAGGTTGGCTGGGGCTTCGAAGAATTTGTGGCTTCCTGAGGAGGAAGAGAAATTTTGTAGGCTACATATaGATTCATACCATCCCCTAT +
Preference number: 2 (lower is better)
Translates to: IGWLGLRRICGFLRRKRNFVGYI*IHTIPY
Trigger: ATAGGGGATGGTATGAATGCATATGTAGCCTACAAA...ATTTCTCTTCCTCCTCAGGAAGCCACAAATTCTTCGAAGCCCCAGCCAACCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559389.1
3UTR-3UTR GCA 90 bp AACAATCATTCAACAGTTATCTATTTGACACCTGTTTTGAGCCTGAACCTTTGCAAGGGTTTCATTGTCTaGCCAGTGTCTGGGCCAGAA +
Preference number: 2 (lower is better)
Translates to: NNHSTVIYLTPVLSLNLCKGFIV*PVSGPE
Trigger: TTCTGGCCCAGACACTGGGCAGACAATGAAACCCTT...GCAAAGGTTCAGGCTCAAAACAGGTGTCAAATAGATAACTGTTGAATGATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp TCATACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCAAATTGCTTCGAAGAATTTGTaGCTTCCTGAGGAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: SYHPLSSQDQLYRLSNQIASKNL*LPEEEE
Trigger: CTCTTCCTCCTCAGGAAGCCACAAATTCTTCGAAGC...AATTTGATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559389.1
3UTR CAA 90 bp TTTTTGTGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTATTTaGTCACTGAGTACTGACACTGAATACTGGGATCACACCAGCTCG +
Preference number: 2 (lower is better)
Translates to: FLCRRQFLFPFLSFI*SLSTDTEYWDHTSS
Trigger: CGAGCTGGTGTGATCCCAGTATTCAGTGTCAGTACTCAGTGACAAAATAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
3UTR-3UTR GCA 90 bp ACTCAAAACATGATGGGAGCAAGCTACAAACACACAAGAGGCCGCTATAAATCTAGTCTCTGCCTCCTTTaGAGGAGAATAGGTTTTAAT +
Preference number: 2 (lower is better)
Translates to: TQNMMGASYKHTRGRYKSSLCLL*RRIGFN
Trigger: ATTAAAACCTATTCTCCTGCAAAGGAGGCAGAGACT...AGATTTATAGCGGCCTCTTGTGTGTTTGTAGCTTGCTCCCATCATGTTTTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp GTTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTACTGAGGATGTGTTTTaGTGGGTGACAAAAATAGGT +
Preference number: 2 (lower is better)
Translates to: VPSYRSIQNENLLGRVNSTEDVF*WVTKIG
Trigger: ACCTATTTTTGTCACCCATCAAAACACATCCTCAGT...ACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp AATAAACCTACAGGGCTGGTCTCAAAGCATCAGTGTGAATTCATGATTTTTAGTCTTCACACAGTCTACTaGGGATGTGTTTTGATGGGT +
Preference number: 2 (lower is better)
Translates to: NKPTGLVSKHQCEFMIFSLHTVY*GCVLMG
Trigger: ACCCATCAAAACACATCCTCAGTAGACTGTGTGAAG...ACTAAAAATCATGAATTCACACTGATGCTTTGAGACCAGCCCTGTAGGTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp AATGCTTCACATCTCCTTACACTTATATTCCCATCTAGGGCATTGGAAAATGCCCTTAACAAAGCAACCTaGAATCTTTGTCTCTCTGGA +
Preference number: 2 (lower is better)
Translates to: NASHLLTLIFPSRALENALNKAT*NLCLSG
Trigger: TCCAGAGAGACAAAGATTTCAGGTTGCTTTGTTAAG...GGCATTTTCCAATGCCCTAGATGGGAATATAAGTGTAAGGAGATGTGAAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR GCA 90 bp CATACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCAAATTGTCTGATTATTTTGTGTaGTGTCCAAGGATAGCTCCA +
Preference number: 2 (lower is better)
Translates to: HTIPYLLRISYTDCQIKLSDYFV*CPRIAP
Trigger: TGGAGCTATCCTTGGACAGCACACAAAATAATCAGA...CAATTTGATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559389.1
3UTR-3UTR CCA 90 bp AATTCTCTTCTTCTCTTAGAAGAGAATGTCCTGTTCTTAGGGAAATGCATACTGTTGTTGGCCTGTTCCTaGTGGAGCTGCTCAATTTTT +
Preference number: 2 (lower is better)
Translates to: NSLLLLEENVLFLGKCILLLACS*WSCSIF
Trigger: AAAAATTGAGCAGCTCCACCAGGAACAGGCCAACAA...CAGTATGCATTTCCCTAAGAACAGGACATTCTCTTCTAAGAGAAGAAGAGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR TCA 90 bp GGTAATGAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTACTGAGGATGTGTTTTaGTGGGTGACAAAAATAGGT +
Preference number: 2 (lower is better)
Translates to: GNERQKKVEESAVLRDTRTEDVF*WVTKIG
Trigger: ACCTATTTTTGTCACCCATCAAAACACATCCTCAGT...ACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTCATTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR GCA 90 bp GTTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTTTGTAGGCTACATATaGATTCATACCATCCCCTAT +
Preference number: 2 (lower is better)
Translates to: VPSYRSIQNENLLGRVNSFVGYI*IHTIPY
Trigger: ATAGGGGATGGTATGAATGCATATGTAGCCTACAAA...ACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR GCA 90 bp TTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTAGCTCTTTACAAAAATaGACAAGCCCTAAAGACAAC +
Preference number: 2 (lower is better)
Translates to: FLATGAFRMKIFWEELTVSSLQK*TSPKDN
Trigger: GTTGTCTTTAGGGCTTGTGCATTTTTGTAAAGAGCT...AACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp AGTTGCTGGTATTTTTGTGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTATGGCTTTCATGTCTATaGAGACAAAGCATCAAGTCA +
Preference number: 2 (lower is better)
Translates to: SCWYFCVGDNSYSRFSHLWLSCL*RQSIKS
Trigger: TGACTTGATGCTTTGTCTCCATAGACATGAAAGCCA...TAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACACAAAAATACCAGCAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp GTTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTAAATCTTTGTCTCTCTaGAGGAAAGAGTTAACAACA +
Preference number: 2 (lower is better)
Translates to: VPSYRSIQNENLLGRVNSKSLSL*RKELTT
Trigger: TGTTGTTAACTCTTTCCTCCAGAGAGACAAAGATTT...ACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR TCA 90 bp AACAATCATTCAACAGTTATCTATTTGACACCTGTTTTGAGCCTGAACCTTTGCAAGACAAAAGAAAGTTaGGGAATCTGCAGTATTGAG +
Preference number: 2 (lower is better)
Translates to: NNHSTVIYLTPVLSLNLCKTKES*GICSIE
Trigger: CTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTT...GCAAAGGTTCAGGCTCAAAACAGGTGTCAAATAGATAACTGTTGAATGATTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp GAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTTTACAAGATGAATCAAAATTATaGTACAGTCACCCTATGGAT +
Preference number: 2 (lower is better)
Translates to: ERQKKVEESAVLRDTRLQDESKL*YSHPMD
Trigger: ATCCATAGGGTGACTGTACCATAATTTTGATTCATC...TTGTAAACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CCA 90 bp AGTTGCTGGTATTTTTGTGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTAGATGAATCAAAATTATaGTACAGTCACCCTATGGAT +
Preference number: 2 (lower is better)
Translates to: SCWYFCVGDNSYSRFSHLDESKL*YSHPMD
Trigger: ATCCATAGGGTGACTGTACCATAATTTTGATTCATC...TAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACACAAAAATACCAGCAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 72 bp TGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTaGTCGAAGGCAGCGCGGACTATGGCCAGGAGGCGA +
Preference number: 3 (lower is better)
Translates to: WASCQRCHVFMR*SKAARTMARRR
Trigger: TCGCCTCCTGGCCATAGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR CCA 72 bp CGAGCCTCGGCCTCCCGCTTCTTCTGCAGTGTGGCTTaGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGC +
Preference number: 3 (lower is better)
Translates to: RASASRFFCSVA*ASCQRCHVFMR
Trigger: GCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGCCGAGGCTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR CCA 72 bp GCAGCCGAGCCTCGGCCTCCCGCTTCTTCTGCAGTGTaGCTTGGGCATCCTGCCAGCGCTGCCATGTCTTCA +
Preference number: 3 (lower is better)
Translates to: AAEPRPPASSAV*LGHPASAAMSS
Trigger: TGAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGCCGAGGCTCGGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR TCA 72 bp CTGTGGACACAGCTAAGGGGGAAGCCCATCCTTGACTaGCGAGACTCTGGCCTCCCCTGGCTAGACCGGCAG +
Preference number: 3 (lower is better)
Translates to: LWTQLRGKPILD*RDSGLPWLDRQ
Trigger: CTGCCGGTCTAGCCAGGGGAGGCCAGAGTCTCGTCAGTCAAGGATGGGCTTCCCCCTTAGCTGTGTCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR GCA 72 bp GCCTCCCGCTTCTTCTGCAGTGTGGCTTGGGCATCCTaGCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAG +
Preference number: 3 (lower is better)
Translates to: ASRFFCSVAWAS*QRCHVFMRWSK
Trigger: CTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR GCA 72 bp ACCCGAGACTCCCACTCGAGGATCTCGTCCTTGGCCTaGTGCAGCTTATCAGGCTTGTTGGCCCACAGCAGC +
Preference number: 3 (lower is better)
Translates to: TRDSHSRISSLA*CSLSGLLAHSS
Trigger: GCTGCTGTGGGCCAACAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGTGGGAGTCTCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR GCA 72 bp CACCCTTTGGCTGTGTGTGCAACTCCTGAGGGCTCTTaGTGGCAGGCTACCTCCTGGGCACAGACAGTAGAG +
Preference number: 3 (lower is better)
Translates to: HPLAVCATPEGS*WQATSWAQTVE
Trigger: CTCTACTGTCTGTGCCCAGGAGGTAGCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACAGCCAAAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR GCA 72 bp CTCAGTGGACTCACCTCGAGGATCTCGTCCTTGGCCTaGTGCAGCTTATCAGGCTTGTTGGCCCACAGCAGC +
Preference number: 3 (lower is better)
Translates to: LSGLTSRISSLA*CSLSGLLAHSS
Trigger: GCTGCTGTGGGCCAACAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGGTGAGTCCACTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR CCA 72 bp TGGGGCTTGATGTCCTTGAAGTCTATGGGCTTCCCGTaGGCCCTGAGTGTGCTCGGCAAAAGACACGCCCTC +
Preference number: 3 (lower is better)
Translates to: WGLMSLKSMGFP*ALSVLGKRHAL
Trigger: GAGGGCGTGTCTTTTGCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
3UTR CCA 72 bp AGCGCTCTTCCCCCTGTGGGGTTCCAAACCTCTGGGTaGGATGGGCCCTGGGTTCATTTGGAACCAGCAGAA +
Preference number: 3 (lower is better)
Translates to: SALPPVGFQTSG*DGPWVHLEPAE
Trigger: TTCTGCTGGTTCCAAATGAACCCAGGGCCCATCCCACCCAGAGGTTTGGAACCCCACAGGGGGAAGAGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR CCA 72 bp AATCAGCGCTCTTCCCCCTGTGGGGTTCCAAACCTCTaGGTGGGATGGGCCCTGGGTTCATTTGGAACCAGC +
Preference number: 3 (lower is better)
Translates to: NQRSSPCGVPNL*VGWALGSFGTS
Trigger: GCTGGTTCCAAATGAACCCAGGGCCCATCCCACCCAGAGGTTTGGAACCCCACAGGGGGAAGAGCGCTGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR-3UTR CAA 90 bp CTTGCACCACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGGGGGAAGCCCATCCTaGACTGACGAGACTCTGGCC +
Preference number: 3 (lower is better)
Translates to: LAPLALPLVLHLCTGNQNGGSPS*TDETLA
Trigger: GGCCAGAGTCTCGTCAGTCAAGGATGGGCTTCCCCC...ATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp CTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCGTGGCAGGAGCGTCTTaGGGATGGAGGGGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: LALPLVLHLCTGNQNVYCVAGAS*GWRGWR
Trigger: CCTCCAGCCCCTCCATCCCAAAGACGCTCCTGCCAC...GCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp GCTTGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGACGGCATCTGTGGCTTaGTTGAACATCTTGAGGAGA +
Preference number: 3 (lower is better)
Translates to: AWASCQRCHVFMRWSKAATASVA*LNILRR
Trigger: TCTCCTCAAGATGTTCAACAAAGCCACAGATGCCGT...CGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR GCA 72 bp TCTCCTGAGGGTAGGGATAAGCCTGGCTGCTCTTCCTaGCTCCAGTCTCACGCCTTCTGGTGTGTCCAGATC +
Preference number: 3 (lower is better)
Translates to: SPEGRDKPGCSS*LQSHAFWCVQI
Trigger: GATCTGGACACACCAGAAGGCGTGAGACTGGAGGCAGGAAGAGCAGCCAGGCTTATCCCTACCCTCAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 72 bp CCTTTGGCTGTGTGTGCAACTCCTGAGGGCTCTTGCTaGCAGGCTACCTCCTGGGCACAGACAGTAGAGCTT +
Preference number: 3 (lower is better)
Translates to: PLAVCATPEGSC*QATSWAQTVEL
Trigger: AAGCTCTACTGTCTGTGCCCAGGAGGTAGCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACAGCCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR CCA 72 bp CTGGCTAGACCGGCAGAGATCTGTGTGAACACCCTTTaGCTGTGTGTGCAACTCCTGAGGGCTCTTGCTGGC +
Preference number: 3 (lower is better)
Translates to: LARPAEICVNTL*LCVQLLRALAG
Trigger: GCCAGCAAGAGCCCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCTAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR CCA 72 bp ACCAGCACCACTCAATGTCTGGGTACCCACGGCACGTaGCAGCTACAAGACCAAGAAGGCAGGGATGGCAAG +
Preference number: 3 (lower is better)
Translates to: TSTTQCLGTHGT*QLQDQEGRDGK
Trigger: CTTGCCATCCCTGCCTTCTTGGTCTTGTAGCTGCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR TCA 72 bp TGGAAAGCGCCTCCCAGGTCCTATCAGACACCCATGTaGTGTGGCTCCTGCTCGTTTTTCTCCATGGGCCTC +
Preference number: 3 (lower is better)
Translates to: WKAPPRSYQTPM*CGSCSFFSMGL
Trigger: GAGGCCCATGGAGAAAAACGAGCAGGAGCCACATCACATGGGTGTCTGATAGGACCTGGGAGGCGCTTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 72 bp AAAAGGCAGCGTCACACAGGTGGGCTCTGGGGTCCTTaGTCCATTAGGAGATGGCCTTTGCCTCAGGAAGGA +
Preference number: 3 (lower is better)
Translates to: KRQRHTGGLWGP*SIRRWPLPQEG
Trigger: TCCTTCCTGAGGCAAAGGCCATCTCCTAATGGACCAAGGACCCCAGAGCCCACCTGTGTGACGCTGCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR CCA 72 bp GGCTGCCAAGTACTGGTGGGGAAAATCCCACCACCTTaGGGCTTGATGTCCTTGAAGTCTATGGGCTTCCCG +
Preference number: 3 (lower is better)
Translates to: GCQVLVGKIPPP*GLMSLKSMGFP
Trigger: CGGGAAGCCCATAGACTTCAAGGACATCAAGCCCCAAGGTGGTGGGATTTTCCCCACCAGTACTTGGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
3UTR CCA 72 bp CTCTGCTACTACTCCACTGGGCAACCCCTGCCCATCTaGGGAAAGAATGTCTTGCAGGGGTCAGAGAAGCTC +
Preference number: 3 (lower is better)
Translates to: LCYYSTGQPLPI*GKNVLQGSEKL
Trigger: GAGCTTCTCTGACCCCTGCAAGACATTCTTTCCCCAGATGGGCAGGGGTTGCCCAGTGGAGTAGTAGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558040.5
3UTR-3UTR CAA 90 bp AGCGCGGACTATGGCCAGGAGGCGAATGTAGTCACTCAGGAGCTCAGCAAGGAGGCATGGCTAGACTCTTaGCAAACTGGGCTGTGTTCA +
Preference number: 3 (lower is better)
Translates to: SADYGQEANVVTQELSKEAWLDS*QTGLCS
Trigger: TGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGC...CTCCTTGCTGAGCTCCTGAGTGACTACATTCGCCTCCTGGCCATAGTCCGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR-3UTR CAA 90 bp CTCAGTGGACTCACCTCGAGGATCTCGTCCTTGGCCTGCTGCAGCTTATCAGGCGCATGGCTAGACTCTTaGCAAACTGGGCTGTGTTCA +
Preference number: 3 (lower is better)
Translates to: LSGLTSRISSLACCSLSGAWLDS*QTGLCS
Trigger: TGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGC...GCCTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGGTGAGTCCACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR-3UTR CAA 90 bp GGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGGGTAGGAGGAAGAAGTCATaGTTGGCCTGTTCCTGGTGG +
Preference number: 3 (lower is better)
Translates to: GGGGQCIKRQRHTGGLWGRRKKS*LACSWW
Trigger: CCACCAGGAACAGGCCAACAATGACTTCTTCCTCCT...ACCCCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR TCA 72 bp TTTTTCTTCCACCTCAGCCAGCTGGGAGAGTGCCCGTaGCAATGCCGTGTTGTCCTCAGAGCTCCCAAGCAT +
Preference number: 3 (lower is better)
Translates to: FFFHLSQLGECP*QCRVVLRAPKH
Trigger: ATGCTTGGGAGCTCTGAGGACAACACGGCATTGTCACGGGCACTCTCCCAGCTGGCTGAGGTGGAAGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR CCA 72 bp TGTGCGCACTGTAGCACAGATGTGTCCTCCTATGTTTaGAGCCAGGGATCCCCATTATCTTCTCCCGCCCTC +
Preference number: 3 (lower is better)
Translates to: CAHCSTDVSSYV*SQGSPLSSPAL
Trigger: GAGGGCGGGAGAAGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
3UTR-3UTR CAA 90 bp CTTGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGCAGCTCTTTCCTATGGTaGACTAGAGTTTCTACAACA +
Preference number: 3 (lower is better)
Translates to: LGHPASAAMSSCAGRRQRSSFLW*TRVSTT
Trigger: TGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGCT...GCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR TCA 72 bp ATGGGCCTCACTGACTTTACCCTACACCAAGCCACTTaGCATTTCCCTAGATGCGCCTACCTCACCCTGCCA +
Preference number: 3 (lower is better)
Translates to: MGLTDFTLHQAT*HFPRCAYLTLP
Trigger: TGGCAGGGTGAGGTAGGCGCATCTAGGGAAATGTCAAGTGGCTTGGTGTAGGGTAAAGTCAGTGAGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR TCA 72 bp CCAGTCCTCATCTTCAGCACTCCGGAGCCCAAACGCTaGACTAGCCAAGGGGAAAGCAGGTTCCATACCTTT +
Preference number: 3 (lower is better)
Translates to: PVLIFSTPEPKR*TSQGESRFHTF
Trigger: AAAGGTATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGAAGATGAGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR TCA 72 bp ACACACTTGGGTCCCTCAAGTAACAGGGGTTCACTGTaGAGAGAGCTGAGGGACCAAGAACTGGGGCAACAG +
Preference number: 3 (lower is better)
Translates to: THLGPSSNRGSL*RELRDQELGQQ
Trigger: CTGTTGCCCCAGTTCTTGGTCCCTCAGCTCTCTTCACAGTGAACCCCTGTTACTTGAGGGACCCAAGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558040.5
3UTR GCA 72 bp CCACTTGACATTTCCCTAGATGCGCCTACCTCACCCTaGCAGACAGACAGGGAGGCAGAAGCAACAAACACT +
Preference number: 3 (lower is better)
Translates to: PLDISLDAPTSP*QTDREAEATNT
Trigger: AGTGTTTGTTGCTTCTGCCTCCCTGTCTGTCTGGCAGGGTGAGGTAGGCGCATCTAGGGAAATGTCAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 72 bp GTGACAATGCCGTGTTGTCCTCAGAGCTCCCAAGCATaGCTAGACTCTTTGCAAACTGGGCTGTGTTCAGCG +
Preference number: 3 (lower is better)
Translates to: VTMPCCPQSSQA*LDSLQTGLCSA
Trigger: CGCTGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACACGGCATTGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR CCA 72 bp CAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTaGGGTCCTTGGTCCATTAGGAGATGGCCTTTGCCT +
Preference number: 3 (lower is better)
Translates to: QCIKRQRHTGGL*GPWSIRRWPLP
Trigger: AGGCAAAGGCCATCTCCTAATGGACCAAGGACCCCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR CCA 72 bp CTGGTGTGTCCAGATCACGAAGCGACAATGGTAATGTaGAAAGCGCCTCCCAGGTCCTATCAGACACCCATG +
Preference number: 3 (lower is better)
Translates to: LVCPDHEATMVM*KAPPRSYQTPM
Trigger: CATGGGTGTCTGATAGGACCTGGGAGGCGCTTTCCACATTACCATTGTCGCTTCGTGATCTGGACACACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 72 bp CCTCAAGCCTCTCATCAAATCAAGGACCGATCTCAGTaGTTCCGAAACTCTCCTGAGCTCTGGCCCCACCAT +
Preference number: 3 (lower is better)
Translates to: PQASHQIKDRSQ*FRNSPELWPHH
Trigger: ATGGTGGGGCCAGAGCTCAGGAGAGTTTCGGAACCACTGAGATCGGTCCTTGATTTGATGAGAGGCTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 72 bp ATGTGTTACAAAGGGTTTCATTGTCTGCCCAGTGTCTaGGCCAGAAGCTTGCGGGGCATCCTAGCTACCTCC +
Preference number: 3 (lower is better)
Translates to: MCYKGFHCLPSV*ARSLRGILATS
Trigger: GGAGGTAGCTAGGATGCCCCGCAAGCTTCTGGCCCAGACACTGGGCAGACAATGAAACCCTTTGTAACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 72 bp CGGCACGTGGCAGCTACAAGACCAAGAAGGCAGGGATaGCAAGTTATCTGCTGCCCCTCTTCTTTTTCCAAG +
Preference number: 3 (lower is better)
Translates to: RHVAATRPRRQG*QVICCPSSFSK
Trigger: CTTGGAAAAAGAAGAGGGGCAGCAGATAACTTGCCATCCCTGCCTTCTTGGTCTTGTAGCTGCCACGTGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR CCA 72 bp TTGAACATCTTGAGGAGACCAGCACCACTCAATGTCTaGGTACCCACGGCACGTGGCAGCTACAAGACCAAG +
Preference number: 3 (lower is better)
Translates to: LNILRRPAPLNV*VPTARGSYKTK
Trigger: CTTGGTCTTGTAGCTGCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTCTCCTCAAGATGTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR-3UTR CAA 90 bp CTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCCTGTGTGAACACCCTTaGGCTGTGTGTGCAACTCCT +
Preference number: 3 (lower is better)
Translates to: LALPLVLHLCTGNQNVYCLCEHP*AVCATP
Trigger: AGGAGTTGCACACACAGCCAAAGGGTGTTCACACAG...GCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp CCGTGTTGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTTGCAAACTGGGCTGGCTTTGTTGAACATCTaGAGGAGACCAGCACCACTC +
Preference number: 3 (lower is better)
Translates to: PCCPQSSQAWLDSLQTGLALLNI*RRPAPL
Trigger: GAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGC...CAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR-3UTR CAA 90 bp TGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCAGCTTATCAGGCTTGTaGGCCCACAGCAGCCGAGCC +
Preference number: 3 (lower is better)
Translates to: CPFISDQARPCPNMEQRISLSGL*AHSSRA
Trigger: GGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGCT...GATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR CAA 90 bp CTATTGCCTCATGTGTTACAAAGGGTTTCATTGTCTGCCCAGTGTCTGGGCCAGTGCAGCTTATCAGGCTaGTTGGCCCACAGCAGCCGA +
Preference number: 3 (lower is better)
Translates to: LLPHVLQRVSLSAQCLGQCSLSG*LAHSSR
Trigger: TCGGCTGCTGTGGGCCAACAAGCCTGATAAGCTGCA...CTGGCCCAGACACTGGGCAGACAATGAAACCCTTTGTAACACATGAGGCAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR CAA 90 bp TCAGCACTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAGGTTCCATATTACAAAGGGTTTCATaGTCTGCCCAGTGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: SALRSPNAELAKGKAGSILQRVS*SAQCLG
Trigger: GCCCAGACACTGGGCAGACAATGAAACCCTTTGTAA...TATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR GCA 72 bp CACCACTGCTTCCCCTCCCATCTGCCCCAAACCTATTaGCTCATGTGTTACAAAGGGTTTCATTGTCTGCCC +
Preference number: 3 (lower is better)
Translates to: HHCFPSHLPQTY*LMCYKGFHCLP
Trigger: GGGCAGACAATGAAACCCTTTGTAACACATGAGGCAATAGGTTTGGGGCAGATGGGAGGGGAAGCAGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 72 bp TTGAACATCTTGAGGAGACCAGCACCACTCAATGTCTaGGTACCCACGGCACGTGGCAGCTCTTCTTTTTCC +
Preference number: 3 (lower is better)
Translates to: LNILRRPAPLNV*VPTARGSSSFS
Trigger: GGAAAAAGAAGAGCTGCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTCTCCTCAAGATGTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR CCA 72 bp GTTCAAGCATCAGGTTCTCCACAAAGTCCTCCCTCCTaGGTCCCCAGCTGGAATACCACCTTCTTCCTTTGT +
Preference number: 3 (lower is better)
Translates to: VQASGSPQSPPS*VPSWNTTFFLC
Trigger: ACAAAGGAAGAAGGTGGTATTCCAGCTGGGGACCCAGGAGGGAGGACTTTGTGGAGAACCTGATGCTTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 72 bp CACCCATGTGATGTGGCTCCTGCTCGTTTTTCTCCATaGGCCTCACTGACTTTACCCTACACCAAGCCACTT +
Preference number: 3 (lower is better)
Translates to: HPCDVAPARFSP*ASLTLPYTKPL
Trigger: AAGTGGCTTGGTGTAGGGTAAAGTCAGTGAGGCCCATGGAGAAAAACGAGCAGGAGCCACATCACATGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 72 bp GAGCTGGGTCCTTTCACAGACAGTATGAACGCCAGGTaGCAGAGCCTGCAACTGGGGAACAATCATTCAACA +
Preference number: 3 (lower is better)
Translates to: ELGPFTDSMNAR*QSLQLGNNHST
Trigger: TGTTGAATGATTGTTCCCCAGTTGCAGGCTCTGCCACCTGGCGTTCATACTGTCTGTGAAAGGACCCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp CCAAAGTTGATGGTAAGGATACTGAGGGGTAGGGAGAGTGACTTTTTCCAAAAAGTGGCAGGAGCGTCTTaGGGATGGAGGGGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: PKLMVRILRGRESDFFQKVAGAS*GWRGWR
Trigger: CCTCCAGCCCCTCCATCCCAAAGACGCTCCTGCCAC...TTTTTGGAAAAAGTCACTCTCCCTACCCCTCAGTATCCTTACCATCAACTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp TCAGCACTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAGGTTCCATAACGGCATCTGTGGCTTaGTTGAACATCTTGAGGAGA +
Preference number: 3 (lower is better)
Translates to: SALRSPNAELAKGKAGSITASVA*LNILRR
Trigger: TCTCCTCAAGATGTTCAACAAAGCCACAGATGCCGT...TATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR CAA 90 bp GTTCCAAACCTCTGGGTGGGATGGGCCCTGGGTTCATTTGGAACCAGCAGAACAATCTTGATGGTCATTTaGCTGACGGCATCTGTGGCT +
Preference number: 3 (lower is better)
Translates to: VPNLWVGWALGSFGTSRTILMVI*LTASVA
Trigger: AGCCACAGATGCCGTCAGCAAAATGACCATCAAGAT...TGTTCTGCTGGTTCCAAATGAACCCAGGGCCCATCCCACCCAGAGGTTTGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR-3UTR CAA 90 bp TCTTCCTTTGTGCTCCTGTTATTCCTTGTAGAGGCTTCTGGCTCAGTACCCCTACGTGACAATGCCGTGTaGTCCTCAGAGCTCCCAAGC +
Preference number: 3 (lower is better)
Translates to: SSFVLLLFLVEASGSVPLRDNAV*SSELPS
Trigger: GCTTGGGAGCTCTGAGGACAACACGGCATTGTCACG...TAGGGGTACTGAGCCAGAAGCCTCTACAAGGAATAACAGGAGCACAAAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR CAA 90 bp ACGCCCTCCATCACCACACACTCTCCAGCCACATCTTGGCCCCATCCTGAGATTAGCAACCTGAAATCTTaGTCTCTCTGGAGGAAAGAG +
Preference number: 3 (lower is better)
Translates to: TPSITTHSPATSWPHPEISNLKS*SLWRKE
Trigger: CTCTTTCCTCCAGAGAGACAAAGATTTCAGGTTGCT...AATCTCAGGATGGGGCCAAGATGTGGCTGGAGAGTGTGTGGTGATGGAGGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp GTTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTGTGGCAGGAGCGTCTTaGGGATGGAGGGGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: VPSYRSIQNENLLGRVNSVAGAS*GWRGWR
Trigger: CCTCCAGCCCCTCCATCCCAAAGACGCTCCTGCCAC...ACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp CACCTGTTAAAAAGAAATACTTGCACCACTGGCCCTTCCCCTGGTGCTGCATCTGTTTACTGCGTTTTCTaGTCTCAGGTTGCCTCGCCC +
Preference number: 3 (lower is better)
Translates to: HLLKRNTCTTGPSPGAASVYCVF*SQVASP
Trigger: GGGCGAGGCAACCTGAGACAAGAAAACGCAGTAAAC...AGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAGTATTTCTTTTTAACAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR TCA 72 bp ACCACTGTTGAAATCCTCTCGAAGTCCCTTTCATATTaGGTCACCCGAGACTCCCACTCGAGGATCTCGTCC +
Preference number: 3 (lower is better)
Translates to: TTVEILSKSLSY*VTRDSHSRISS
Trigger: GGACGAGATCCTCGAGTGGGAGTCTCGGGTGACTCAATATGAAAGGGACTTCGAGAGGATTTCAACAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR TCA 72 bp ATGTGGCTCCTGCTCGTTTTTCTCCATGGGCCTCACTaGCTTTACCCTACACCAAGCCACTTGACATTTCCC +
Preference number: 3 (lower is better)
Translates to: MWLLLVFLHGPH*LYPTPSHLTFP
Trigger: GGGAAATGTCAAGTGGCTTGGTGTAGGGTAAAGTCAGTGAGGCCCATGGAGAAAAACGAGCAGGAGCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR GCA 72 bp AGAGTTTCTACAACAGCATGCAGTTTCCGTAAGCGCTaGTCCTCACACTCTACCTCCTGGAGCTTCTCCTCA +
Preference number: 3 (lower is better)
Translates to: RVSTTACSFRKR*SSHSTSWSFSS
Trigger: TGAGGAGAAGCTCCAGGAGGTAGAGTGTGAGGAGCAGCGCTTACGGAAACTGCATGCTGTTGTAGAAACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR CCA 72 bp TCAGAGCTCCCAAGCATGGCTAGACTCTTTGCAAACTaGGCTGTGTTCAGCGCTAGCTCTTTCCTATGGTTG +
Preference number: 3 (lower is better)
Translates to: SELPSMARLFAN*AVFSASSFLWL
Trigger: CAACCATAGGAAAGAGCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR CCA 72 bp AGCTCTTTACAAAAATGCACAAGCCCTAAAGACAACTaGCCCCGCCAGCCTCAGGATACAGGAAGCAGAGGA +
Preference number: 3 (lower is better)
Translates to: SSLQKCTSPKDN*PRQPQDTGSRG
Trigger: TCCTCTGCTTCCTGTATCCTGAGGCTGGCGGGGCCAGTTGTCTTTAGGGCTTGTGCATTTTTGTAAAGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp ACATTTGCAATCAGTTTCCATGAGGTGTCGGCGCTGTTGGGAAGGACTGGGAGAGTTAAAAAGAAATACTaGCACCACTGGCCCTTCCCC +
Preference number: 3 (lower is better)
Translates to: TFAISFHEVSALLGRTGRVKKKY*HHWPFP
Trigger: GGGGAAGGGCCAGTGGTGCAAGTATTTCTTTTTAAC...TCTCCCAGTCCTTCCCAACAGCGCCGACACCTCATGGAAACTGATTGCAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR GCA 72 bp AAGAAATACTTGCACCACTGGCCCTTCCCCTGGTGCTaGATCTGTGTACAGGGAATCAGAATGTTTACTGCG +
Preference number: 3 (lower is better)
Translates to: KKYLHHWPFPWC*ICVQGIRMFTA
Trigger: CGCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAGTATTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR GCA 72 bp GGAAAGAATGTCTTGCAGGGGTCAGAGAAGCTCCAATaGTTACCAGGTCAGGTGGGTATCCAAATGGGACTT +
Preference number: 3 (lower is better)
Translates to: GKNVLQGSEKLQ*LPGQVGIQMGL
Trigger: AAGTCCCATTTGGATACCCACCTGACCTGGTAAGCATTGGAGCTTCTCTGACCCCTGCAAGACATTCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558040.5
3UTR CCA 72 bp AGAGCTTCTTTGAACCTCCTAAGGTTCAGGAGCTCTTaGATCACCCTATCTAGAGGCAGAGGGCATGGCTTT +
Preference number: 3 (lower is better)
Translates to: RASLNLLRFRSS*ITLSRGRGHGF
Trigger: AAAGCCATGCCCTCTGCCTCTAGATAGGGTGATCCAAGAGCTCCTGAACCTTAGGAGGTTCAAAGAAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR GCA 72 bp TACTTGATTTCCACACGTGCAAGCTCTTTACAAAAATaGACAAGCCCTAAAGACAACTGGCCCCGCCAGCCT +
Preference number: 3 (lower is better)
Translates to: YLISTRASSLQK*TSPKDNWPRQP
Trigger: AGGCTGGCGGGGCCAGTTGTCTTTAGGGCTTGTGCATTTTTGTAAAGAGCTTGCACGTGTGGAAATCAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 72 bp ATCTATTTGACACCTGTTTTGAGCCTGAACCTTTGCTaGGGCCCATGGAGTTATAAAGGCGTAAGACCCCAG +
Preference number: 3 (lower is better)
Translates to: IYLTPVLSLNLC*GPWSYKGVRPQ
Trigger: CTGGGGTCTTACGCCTTTATAACTCCATGGGCCCCAGCAAAGGTTCAGGCTCAAAACAGGTGTCAAATAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp CTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCGTTTTCGACAGTAGAGCTTCTTaGAACCTCCTAAGGTTCAGG +
Preference number: 3 (lower is better)
Translates to: LPLVLHLCTGNQNVYCVFDSRAS*NLLRFR
Trigger: CCTGAACCTTAGGAGGTTCAAAGAAGCTCTACTGTC...GAAAACGCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp AATTCTCTTCTTCTCTTAGAAGAGAATGTCCTGTTCTTAGGGAAATGCATACTGGGGGGAAGCCCATCCTaGACTGACGAGACTCTGGCC +
Preference number: 3 (lower is better)
Translates to: NSLLLLEENVLFLGKCILGGSPS*TDETLA
Trigger: GGCCAGAGTCTCGTCAGTCAAGGATGGGCTTCCCCC...CAGTATGCATTTCCCTAAGAACAGGACATTCTCTTCTAAGAGAAGAAGAGAATT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp CATTTGGCACCCAGATCTTGGTTTCTAAATAACATTCTCTGGCTGGGTATGGTGTCTGACCAGTATAGCTaGAGCAGCTGTGGACACAGC +
Preference number: 3 (lower is better)
Translates to: HLAPRSWFLNNILWLGMVSDQYS*SSCGHS
Trigger: GCTGTGTCCACAGCTGCTCAAGCTATACTGGTCAGA...CACCATACCCAGCCAGAGAATGTTATTTAGAAACCAAGATCTGGGTGCCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp CCAAACATGGAGCAGAGAATCTTAGCCAGTGTCTCCAAAGACAGAGTGTACATCGCTTTGTTGAACATCTaGAGGAGACCAGCACCACTC +
Preference number: 3 (lower is better)
Translates to: PNMEQRILASVSKDRVYIALLNI*RRPAPL
Trigger: GAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGC...GATGTACACTCTGTCTTTGGAGACACTGGCTAAGATTCTCTGCTCCATGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR CAA 90 bp CCAAAGTTGATGGTAAGGATACTGAGGGGTAGGGAGAGTGACTTTTTCCAAAAAGTTTACTGCGTTTTCTaGTCTCAGGTTGCCTCGCCC +
Preference number: 3 (lower is better)
Translates to: PKLMVRILRGRESDFFQKVYCVF*SQVASP
Trigger: GGGCGAGGCAACCTGAGACAAGAAAACGCAGTAAAC...TTTTTGGAAAAAGTCACTCTCCCTACCCCTCAGTATCCTTACCATCAACTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp TTACACCTTTTAGACTCAGTTCAAGCATCAGGTTCTCCACAAAGTCCTCCCTCCATCTTGATGGTCATTTaGCTGACGGCATCTGTGGCT +
Preference number: 3 (lower is better)
Translates to: LHLLDSVQASGSPQSPPSILMVI*LTASVA
Trigger: AGCCACAGATGCCGTCAGCAAAATGACCATCAAGAT...GGAGGGAGGACTTTGTGGAGAACCTGATGCTTGAACTGAGTCTAAAAGGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR CAA 90 bp CCAAAGTTGATGGTAAGGATACTGAGGGGTAGGGAGAGTGACTTTTTCCAAAAAAGGAAGAAGTCATTGTaGGCCTGTTCCTGGTGGAGC +
Preference number: 3 (lower is better)
Translates to: PKLMVRILRGRESDFFQKRKKSL*ACSWWS
Trigger: GCTCCACCAGGAACAGGCCAACAATGACTTCTTCCT...TTTTTGGAAAAAGTCACTCTCCCTACCCCTCAGTATCCTTACCATCAACTTTGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR TCA 72 bp AATACGAAACAGATTGAGACCCTCAGAACAGGTAGCTaGGGTAGGCGGAGAGAAAGAAACCCCATTTCCAGA +
Preference number: 3 (lower is better)
Translates to: NTKQIETLRTGS*GRRRERNPISR
Trigger: TCTGGAAATGGGGTTTCTTTCTCTCCGCCTACCTCAGCTACCTGTTCTGAGGGTCTCAATCTGTTTCGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR TCA 72 bp TCTGGCTCAGTACCCCTAACCCACTACTGGCCTACTTaGTTTCCACACGTGCAAGCTCTTTACAAAAATGCA +
Preference number: 3 (lower is better)
Translates to: SGSVPLTHYWPT*FPHVQALYKNA
Trigger: TGCATTTTTGTAAAGAGCTTGCACGTGTGGAAATCAAGTAGGCCAGTAGTGGGTTAGGGGTACTGAGCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR GCA 72 bp TCTTTCCTATGGTTGACTAGAGTTTCTACAACAGCATaGAGTTTCCGTAAGCGCTGCTCCTCACACTCTACC +
Preference number: 3 (lower is better)
Translates to: SFLWLTRVSTTA*SFRKRCSSHST
Trigger: GGTAGAGTGTGAGGAGCAGCGCTTACGGAAACTGCATGCTGTTGTAGAAACTCTAGTCAACCATAGGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR GCA 72 bp GTTATCTATTTGACACCTGTTTTGAGCCTGAACCTTTaGTGGGGCCCATGGAGTTATAAAGGCGTAAGACCC +
Preference number: 3 (lower is better)
Translates to: VIYLTPVLSLNL*WGPWSYKGVRP
Trigger: GGGTCTTACGCCTTTATAACTCCATGGGCCCCAGCAAAGGTTCAGGCTCAAAACAGGTGTCAAATAGATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR GCA 72 bp GTGTTTTGGCTAGCACCTTCTTCTGATTATTTTGTGTaGTGTCCAAGGATAGCTCCACTGTGGCATCTGTGG +
Preference number: 3 (lower is better)
Translates to: VFWLAPSSDYFV*CPRIAPLWHLW
Trigger: CCACAGATGCCACAGTGGAGCTATCCTTGGACAGCACACAAAATAATCAGAAGAAGGTGCTAGCCAAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559389.1
3UTR CCA 72 bp GAGGAAAGAGTTAACAACATGGAAAAGGGGGCAGACTaGAATAAACCTACAGGGCTGGTCTCAAAGCATCAG +
Preference number: 3 (lower is better)
Translates to: EERVNNMEKGAD*NKPTGLVSKHQ
Trigger: CTGATGCTTTGAGACCAGCCCTGTAGGTTTATTCCAGTCTGCCCCCTTTTCCATGTTGTTAACTCTTTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp CTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCGTTTTCAAAAGAGAAAGGCTCTaGCTTAATGATAGGGACACC +
Preference number: 3 (lower is better)
Translates to: LPLVLHLCTGNQNVYCVFKRERL*LNDRDT
Trigger: GGTGTCCCTATCATTAAGCAAGAGCCTTTCTCTTTT...GAAAACGCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp TTCAGCGCTAGCTCTTTCCTATGGTTGACTAGAGTTTCTACAACAGCATGCAGTGACAGTAGAGCTTCTTaGAACCTCCTAAGGTTCAGG +
Preference number: 3 (lower is better)
Translates to: FSASSFLWLTRVSTTACSDSRAS*NLLRFR
Trigger: CCTGAACCTTAGGAGGTTCAAAGAAGCTCTACTGTC...ACTGCATGCTGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGCTAGCGCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR GCA 72 bp AAAAAGAAATACTTGCACCACTGGCCCTTCCCCTGGTaGTGCATCTGTGTACAGGGAATCAGAATGTTTACT +
Preference number: 3 (lower is better)
Translates to: KKKYLHHWPFPW*CICVQGIRMFT
Trigger: AGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAGTATTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR GCA 72 bp ACATTATATGCTGATTACGACGCACTGACGACACACTaGTTCTGTGATATTCCCACCCAGAATGCAAAACCC +
Preference number: 3 (lower is better)
Translates to: TLYADYDALTTH*FCDIPTQNAKP
Trigger: GGGTTTTGCATTCTGGGTGGGAATATCACAGAAGCAGTGTGTCGTCAGTGCGTCGTAATCAGCATATAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR GCA 72 bp CTTTATCACAAGATGCAGTTATCGGCAGGTGACACATaGACCAGAAGACAGGCTTCAGTTGTTCTTGTCCAT +
Preference number: 3 (lower is better)
Translates to: LYHKMQLSAGDT*TRRQASVVLVH
Trigger: ATGGACAAGAACAACTGAAGCCTGTCTTCTGGTGCATGTGTCACCTGCCGATAACTGCATCTTGTGATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp TGGAGACAAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGTTAAAAAGAAATACTaGCACCACTGGCCCTTCCCC +
Preference number: 3 (lower is better)
Translates to: WRQSIKSLSDLHTFTQSTVKKKY*HHWPFP
Trigger: GGGGAAGGGCCAGTGGTGCAAGTATTTCTTTTTAAC...AGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTTGTCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp GTTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTGAAGTCCCTTTCATATaGAGTCACCCGAGACTCCCA +
Preference number: 3 (lower is better)
Translates to: VPSYRSIQNENLLGRVNSEVPFI*SHPRLP
Trigger: TGGGAGTCTCGGGTGACTCAATATGAAAGGGACTTC...ACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR CAA 90 bp TACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCAAATTGATCTAGCTCCTCATAGGTaGGCTGGGGCTTCGAAGAAT +
Preference number: 3 (lower is better)
Translates to: YHPLSSQDQLYRLSNQIDLAPHR*AGASKN
Trigger: ATTCTTCGAAGCCCCAGCCAACCTATGAGGAGCTAG...ATCAATTTGATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559389.1
3UTR CCA 72 bp AAATCTTTGTCTCTCTGGAGGAAAGAGTTAACAACATaGAAAAGGGGGCAGACTGGAATAAACCTACAGGGC +
Preference number: 3 (lower is better)
Translates to: KSLSLWRKELTT*KRGQTGINLQG
Trigger: GCCCTGTAGGTTTATTCCAGTCTGCCCCCTTTTCCATGTTGTTAACTCTTTCCTCCAGAGAGACAAAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp AATGCTTCACATCTCCTTACACTTATATTCCCATCTAGGGCATTGGAAAATGCCTCTGCCCCAAACCTATaGCCTCATGTGTTACAAAGG +
Preference number: 3 (lower is better)
Translates to: NASHLLTLIFPSRALENASAPNL*PHVLQR
Trigger: CCTTTGTAACACATGAGGCAATAGGTTTGGGGCAGA...GGCATTTTCCAATGCCCTAGATGGGAATATAAGTGTAAGGAGATGTGAAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR TCA 72 bp CAAACAACCCCTGACCAAGAATCCAACAACAAGGGATaGATCAAAATTATGGTACAGTCACCCTATGGATGC +
Preference number: 3 (lower is better)
Translates to: QTTPDQESNNKG*IKIMVQSPYGC
Trigger: GCATCCATAGGGTGACTGTACCATAATTTTGATTCATCCCTTGTTGTTGGATTCTTGGTCAGGGGTTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp AGTTGCTGGTATTTTTGTGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTATTACAAAGGGTTTCATaGTCTGCCCAGTGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: SCWYFCVGDNSYSRFSHLLQRVS*SAQCLG
Trigger: GCCCAGACACTGGGCAGACAATGAAACCCTTTGTAA...TAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACACAAAAATACCAGCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR TCA 72 bp TTTCTCAAACCGTATCACTTCTTTTCGGACCACTGTTaGAATCCTCTCGAAGTCCCTTTCATATTGAGTCAC +
Preference number: 3 (lower is better)
Translates to: FLKPYHFFSDHC*NPLEVPFILSH
Trigger: GTGACTCAATATGAAAGGGACTTCGAGAGGATTTCAACAGTGGTCCGAAAAGAAGTGATACGGTTTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR TCA 72 bp CACCTAGTCATGCGGAACCATCACACAAATCCAAACTaGGGAACATTCGACAAAATAGCCTGTATTCTTCAA +
Preference number: 3 (lower is better)
Translates to: HLVMRNHHTNPN*GTFDKIACILQ
Trigger: TTGAAGAATACAGGCTATTTTGTCGAATGTTCCTCAGTTTGGATTTGTGTGATGGTTCCGCATGACTAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR TCA 72 bp CTATCTATCTATCTATCATCTCTTTGCACTGTATGGTaGGAGCCTAGAGGCAATGACATTCCAGTAACAAGC +
Preference number: 3 (lower is better)
Translates to: LSIYLSSLCTVW*EPRGNDIPVTS
Trigger: GCTTGTTACTGGAATGTCATTGCCTCTAGGCTCTCACCATACAGTGCAAAGAGATGATAGATAGATAGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp TATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGAAAAGAGAAAGGCTCTaGCTTAATGATAGGGACACC +
Preference number: 3 (lower is better)
Translates to: YINTPPHPIIPPPIVGLLKRERL*LNDRDT
Trigger: GGTGTCCCTATCATTAAGCAAGAGCCTTTCTCTTTT...CAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp CTGATGGACATTTCAATTGGCTTCAGTTTTTGCAACTGTAAACAGTGCTATGACAGCAACCTGAAATCTTaGTCTCTCTGGAGGAAAGAG +
Preference number: 3 (lower is better)
Translates to: LMDISIGFSFCNCKQCYDSNLKS*SLWRKE
Trigger: CTCTTTCCTCCAGAGAGACAAAGATTTCAGGTTGCT...GTCATAGCACTGTTTACAGTTGCAAAAACTGAAGCCAATTGAAATGTCCATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp GCAACAAACACTTTTACACCTTTTAGACTCAGTTCAAGCATCAGGTTCTCCACAGACTGTCAAATCAAATaGATCCTCCTGTTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: ATNTFTPFRLSSSIRFSTDCQIK*ILLFFF
Trigger: GAAGAAGAACAGGAGGATCAATTTGATTTGACAGTC...TGTGGAGAACCTGATGCTTGAACTGAGTCTAAAAGGTGTAAAAGTGTTTGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR CAA 90 bp ACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCAAATTGATCGACTGTCAAATCAAATaGATCCTCCTGTTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: TIPYLLRISYTDCQIKLIDCQIK*ILLFFF
Trigger: GAAGAAGAACAGGAGGATCAATTTGATTTGACAGTC...GATCAATTTGATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559389.1
3UTR TCA 72 bp GTCATTATCAGACCTTCACACCTTCACACAGTCTACTaGGGATGTGTTTTGATGGGTGACAAAAATAGGTTT +
Preference number: 3 (lower is better)
Translates to: VIIRPSHLHTVY*GCVLMGDKNRF
Trigger: AAACCTATTTTTGTCACCCATCAAAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR TCA 72 bp TTTAAAATGAAATCTGGCAGACACCAACCTAAGCGGTaGACAGAGTTAACAACATTAATGGGACCAACTGAC +
Preference number: 3 (lower is better)
Translates to: FKMKSGRHQPKR*TELTTLMGPTD
Trigger: GTCAGTTGGTCCCATTAATGTTGTTAACTCTGTTCACCGCTTAGGTTGGTGTCTGCCAGATTTCATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR TCA 72 bp CGGTGTAACTGTACCATAATTCATTTAATCCCCTCCTaGTGGACATTTCAATTGGCTTCAGTTTTTGCAACT +
Preference number: 3 (lower is better)
Translates to: RCNCTIIHLIPS*WTFQLASVFAT
Trigger: AGTTGCAAAAACTGAAGCCAATTGAAATGTCCATCAGGAGGGGATTAAATGAATTATGGTACAGTTACACCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR GCA 72 bp ATTTCAATTGGCTTCAGTTTTTGCAACTGTAAACAGTaGTATGACGGGCATTTCTGGTTAGTCATCTTCAAG +
Preference number: 3 (lower is better)
Translates to: ISIGFSFCNCKQ*YDGHFWLVIFK
Trigger: CTTGAAGATGACTAACCAGAAATGCCCGTCATAGCACTGTTTACAGTTGCAAAAACTGAAGCCAATTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CCA 72 bp CAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTaGTATTTTTGTGTAGGCGACAATTCTTATTCCCGT +
Preference number: 3 (lower is better)
Translates to: QNENLLGRVNSC*YFCVGDNSYSR
Trigger: ACGGGAATAAGAATTGTCGCCTACACAAAAATACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
3UTR CCA 72 bp TTTTGCAACTGTAAACAGTGCTATGACGGGCATTTCTaGTTAGTCATCTTCAAGGATTTGGTTTCTAGAAGT +
Preference number: 3 (lower is better)
Translates to: FCNCKQCYDGHF*LVIFKDLVSRS
Trigger: ACTTCTAGAAACCAAATCCTTGAAGATGACTAACCAGAAATGCCCGTCATAGCACTGTTTACAGTTGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR-3UTR CAA 90 bp TTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTTTTACTGCAAACTGTTaGCTTCTGAACAATGGTAAG +
Preference number: 3 (lower is better)
Translates to: FLATGAFRMKIFWEELTVFTANC*LLNNGK
Trigger: CTTACCATTGTTCAGAAGCAAACAGTTTGCAGTAAA...AACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380285.7
3UTR-3UTR CAA 90 bp TCATACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCAAATTTTTACTGCAAACTGTTaGCTTCTGAACAATGGTAAG +
Preference number: 3 (lower is better)
Translates to: SYHPLSSQDQLYRLSNQIFTANC*LLNNGK
Trigger: CTTACCATTGTTCAGAAGCAAACAGTTTGCAGTAAA...AATTTGATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559389.1
3UTR TCA 72 bp ATGAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTaGGAGACACACGTTTACAAATGTAACATGATCCTG +
Preference number: 3 (lower is better)
Translates to: MKDKRKLRNLQY*ETHVYKCNMIL
Trigger: CAGGATCATGTTACATTTGTAAACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR GCA 72 bp ATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTaGTGGTATTTTTGTGTAGGCGACAATTCTTATTCC +
Preference number: 3 (lower is better)
Translates to: IQNENLLGRVNS*WYFCVGDNSYS
Trigger: GGAATAAGAATTGTCGCCTACACAAAAATACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
3UTR CCA 72 bp AAATGTAGAAGGCATTATGGAGTTAGGAAATCATGTTaGTCAATCATGACAGTAATAACTGGGACAAGACTA +
Preference number: 3 (lower is better)
Translates to: KCRRHYGVRKSC*SIMTVITGTRL
Trigger: TAGTCTTGTCCCAGTTATTACTGTCATGATTGACCAACATGATTTCCTAACTCCATAATGCCTTCTACATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CAA 72 bp CCGAGCCTCGGCCTCCCGCTTCTTCTGCAGTGTGGCTaGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCG +
Preference number: 4 (lower is better)
Translates to: PSLGLPLLLQCG*GILPALPCLHA
Trigger: CGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGCCGAGGCTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CCA 90 bp CCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGCGGACTATGGCCAGGCACCACTCAATGTCTaGGTACCCACGGCACGTGGC +
Preference number: 4 (lower is better)
Translates to: PALPCLHALVEGSADYGQAPLNV*VPTARG
Trigger: GCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGC...CTGGCCATAGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CCA 90 bp GCTTGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGTTCTGCAGTGTGGCTTaGGCATCCTGCCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: AWASCQRCHVFMRWSKAAFCSVA*ASCQRC
Trigger: GCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAA...CGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR TCA 90 bp CTTGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGCGGGGCGGAGGGACAATaGAGCCATTCTGAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LGHPASAAMSSCAGRRQRGAEGQ*SHSESA
Trigger: AGCACTCTCAGAATGGCTTCATTGTCCCTCCGCCCC...GCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR TCA 90 bp CAGGCCTCGAGGTCTGGAAGGGAGGTGGCCCTGCCTCATATGCTAGCTGTCCCCCACTGTGAAGAGAGCTaGGGGACCAAGAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: QASRSGREVALPHMLAVPHCEES*GTKNWG
Trigger: GCCCCAGTTCTTGGTCCCTCAGCTCTCTTCACAGTG...GGGGACAGCTAGCATATGAGGCAGGGCCACCTCCCTTCCAGACCTCGAGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR GCA 90 bp GACCAGCACCACTCAATGTCTGGGTACCCACGGCACGTGGCAGCTACAAGACCACACCCCTGGCTGGGCTaGCTCAGTGGACTCACCTCG +
Preference number: 4 (lower is better)
Translates to: DQHHSMSGYPRHVAATRPHPWLG*LSGLTS
Trigger: CGAGGTGAGTCCACTGAGGCAGCCCAGCCAGGGGTG...TGGTCTTGTAGCTGCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CCA 90 bp CTTGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGCGCTTCTTCTGCAGTGTaGCTTGGGCATCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LGHPASAAMSSCAGRRQRASSAV*LGHPAS
Trigger: GCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGC...GCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CCA 90 bp CCTGCCTCATATGCTAGCTGTCCCCAGGGTGCTGGCGGTGGCTTCTCAGCAAGTAGGCAGAAGCCAGGATaGGCAGGAGCTCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PASYASCPQGAGGGFSASRQKPG*AGAPGL
Trigger: GAGGCCTGGAGCTCCTGCCCATCCTGGCTTCTGCCT...ACTTGCTGAGAAGCCACCGCCAGCACCCTGGGGACAGCTAGCATATGAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR GCA 90 bp GCTGGTCGAAGGCAGCGCGGACTATGGCCAGGAGGCGAATGTAGTCACTCAGGAGCCTCCCGCTTCTTCTaGAGTGTGGCTTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: AGRRQRGLWPGGECSHSGASRFF*SVAWAS
Trigger: GGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGC...TCCTGAGTGACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCTTCGACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR GCA 90 bp CTCGAGGTCTGGAAGGGAGGTGGCCCTGCCTCATATGCTAGCTGTCCCCAGGGTCCACTGGGCAACCCCTaGCCATCTGGGGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: LEVWKGGGPASYASCPQGPLGNP*PSGERM
Trigger: CATTCTTTCCCCAGATGGGCAGGGGTTGCCCAGTGG...ACCCTGGGGACAGCTAGCATATGAGGCAGGGCCACCTCCCTTCCAGACCTCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR CCA 90 bp TGGCTTGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCAAAGTCCTCCCTCCTaGGTCCCCAGCTGGAATACC +
Preference number: 4 (lower is better)
Translates to: WLGHPASAAMSSCAGRRQQSPPS*VPSWNT
Trigger: GGTATTCCAGCTGGGGACCCAGGAGGGAGGACTTTG...CTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp GCTTGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGGGCCCTGGGTTCATTTaGAACCAGCAGAACACCCCT +
Preference number: 4 (lower is better)
Translates to: AWASCQRCHVFMRWSKAAGPGFI*NQQNTP
Trigger: AGGGGTGTTCTGCTGGTTCCAAATGAACCCAGGGCC...CGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CCA 90 bp CAGGATGGGCAGGAGCTCCAGGCCTCGAGGTCTGGAAGGGAGGTGGCCCTGCCTGCTTACCAGGTCAGGTaGGTATCCAAATGGGACTTG +
Preference number: 4 (lower is better)
Translates to: QDGQELQASRSGREVALPAYQVR*VSKWDL
Trigger: CAAGTCCCATTTGGATACCCACCTGACCTGGTAAGC...AGGCAGGGCCACCTCCCTTCCAGACCTCGAGGCCTGGAGCTCCTGCCCATCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR CCA 90 bp CTCGAGGTCTGGAAGGGAGGTGGCCCTGCCTCATATGCTAGCTGTCCCCAGGGTCTGCTACTACTCCACTaGGCAACCCCTGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: LEVWKGGGPASYASCPQGLLLLH*ATPAHL
Trigger: CAGATGGGCAGGGGTTGCCCAGTGGAGTAGTAGCAG...ACCCTGGGGACAGCTAGCATATGAGGCAGGGCCACCTCCCTTCCAGACCTCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR TCA 90 bp AGCGCGGACTATGGCCAGGAGGCGAATGTAGTCACTCAGGAGCTCAGCAAGGAGCTGGGAGAGTGCCCGTaGCAATGCCGTGTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SADYGQEANVVTQELSKELGECP*QCRVVL
Trigger: GAGGACAACACGGCATTGTCACGGGCACTCTCCCAG...CTCCTTGCTGAGCTCCTGAGTGACTACATTCGCCTCCTGGCCATAGTCCGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR GCA 90 bp CAGGCCTCGAGGTCTGGAAGGGAGGTGGCCCTGCCTCATATGCTAGCTGTCCCCCTCCACTGTGGCATCTaGAAAGAGATCCTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: QASRSGREVALPHMLAVPLHCGI*KEILWL
Trigger: GAGCCACAGGATCTCTTTGCAGATGCCACAGTGGAG...GGGGACAGCTAGCATATGAGGCAGGGCCACCTCCCTTCCAGACCTCGAGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR GCA 90 bp CAAACCTCTGGGTGGGATGGGCCCTGGGTTCATTTGGAACCAGCAGAACACCCCGTGGCTTGGGCATCCTaGCAGCGCTGCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: QTSGWDGPWVHLEPAEHPVAWAS*QRCHVF
Trigger: GAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCAC...GGGGTGTTCTGCTGGTTCCAAATGAACCCAGGGCCCATCCCACCCAGAGGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CCA 90 bp TGGGGCTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGCACCACTCAATGTCTaGGTACCCACGGCACGTGGC +
Preference number: 4 (lower is better)
Translates to: WGLMSLKSMGFPWALSVLAPLNV*VPTARG
Trigger: GCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGC...GAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GTCCAGCCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTTCTGCAGTGTGGCTTaGGCATCCTGCCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VQPRQDASLGVHQGGGGQFCSVA*ASCQRC
Trigger: GCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAA...CTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp AGCGCGGACTATGGCCAGGAGGCGAATGTAGTCACTCAGGAGCTCAGCAAGGAGGCTGGGCTGCCTCAGTaGACTCACCTCGAGGATCTC +
Preference number: 4 (lower is better)
Translates to: SADYGQEANVVTQELSKEAGLPQ*THLEDL
Trigger: GAGATCCTCGAGGTGAGTCCACTGAGGCAGCCCAGC...CTCCTTGCTGAGCTCCTGAGTGACTACATTCGCCTCCTGGCCATAGTCCGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CCA 90 bp CAGGATGGGCAGGAGCTCCAGGCCTCGAGGTCTGGAAGGGAGGTGGCCCTGCCTAGGTGGGTATCCAAATaGGACTTGTCCTTAACAGGC +
Preference number: 4 (lower is better)
Translates to: QDGQELQASRSGREVALPRWVSK*DLSLTG
Trigger: GCCTGTTAAGGACAAGTCCCATTTGGATACCCACCT...AGGCAGGGCCACCTCCCTTCCAGACCTCGAGGCCTGGAGCTCCTGCCCATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR TCA 90 bp AAAAGACACGCCCTCCATCACCACACACTCTCCAGCCACATCTTGGCCCCATCCAAGCCCATCCTTGACTaGCGAGACTCTGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: KRHALHHHTLSSHILAPSKPILD*RDSGLP
Trigger: GGGGAGGCCAGAGTCTCGTCAGTCAAGGATGGGCTT...GGATGGGGCCAAGATGTGGCTGGAGAGTGTGTGGTGATGGAGGGCGTGTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TGGCCTCCCCTGGCTAGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTGTTCCGAAACTCTCCTaGGCTCTGGCCCCACCATAC +
Preference number: 4 (lower is better)
Translates to: WPPLARPAEICVNTLWLCVPKLS*ALAPPY
Trigger: GTATGGTGGGGCCAGAGCTCAGGAGAGTTTCGGAAC...ACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCTAGCCAGGGGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGGCTCTTGCTGGCAGGCTGTGGCTTGGGCATCCTaGCAGCGCTGCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: CEHPLAVCATPEGSCWQAVAWAS*QRCHVF
Trigger: GAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCAC...AGCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp GGGATCACACCAGCTCGAAGTCCAGTCCTCATCTTCAGCACTCCGGAGCCCAAAGTGGCTTGGGCATCCTaGCAGCGCTGCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: GITPARSPVLIFSTPEPKVAWAS*QRCHVF
Trigger: GAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCAC...TTTGGGCTCCGGAGTGCTGAAGATGAGGACTGGACTTCGAGCTGGTGTGATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp ATCCAGGCATGTGCGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGCACTGCCCCCACCACTaGTTCCCCTCCCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: IQACAHCSTDVSSYVWSQHCPHH*FPSHLP
Trigger: GGGCAGATGGGAGGGGAAGCAGTGGTGGGGGCAGTG...CTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCGCACATGCCTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp GATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGCAAAAGACCTTCAGCACTCACTaGCCCCACCACTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: DVLEVYGLPVGPECARQKTFSTH*PHHCFP
Trigger: GGGGAAGCAGTGGTGGGGGCAGTGAGTGCTGAAGGT...CTTTTGCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CAAACCTCTGGGTGGGATGGGCCCTGGGTTCATTTGGAACCAGCAGAACACCCCTCCACCTCAGCCAGCTaGGAGAGTGCCCGTGACAAT +
Preference number: 4 (lower is better)
Translates to: QTSGWDGPWVHLEPAEHPSTSAS*ESARDN
Trigger: ATTGTCACGGGCACTCTCCCAGCTGGCTGAGGTGGA...GGGGTGTTCTGCTGGTTCCAAATGAACCCAGGGCCCATCCCACCCAGAGGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CCA 90 bp GTCCAGCCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGAGGCAGCGCGGACTATaGCCAGGAGGCGAATGTAGT +
Preference number: 4 (lower is better)
Translates to: VQPRQDASLGVHQGGGGQRQRGL*PGGECS
Trigger: ACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCT...CTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGGCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp GTCCAGCCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGGCTTATCAGGCTTGTTaGCCCACAGCAGCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: VQPRQDASLGVHQGGGGQAYQAC*PTAAEP
Trigger: AGGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGC...CTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGGCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp CAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGGGGGACAGTTGGTCGTaGGGACAGGGAGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: QGGGGQCIKRQRHTGGLWGDSWS*GQGGRG
Trigger: ACCCCTTCCTCCCTGTCCCCACGACCAACTGTCCCC...CCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp TTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGCAAAAGACACGCCCAAAGTCCTCCCTCCTaGGTCCCCAGCTGGAATACC +
Preference number: 4 (lower is better)
Translates to: LKSMGFPWALSVLGKRHAQSPPS*VPSWNT
Trigger: GGTATTCCAGCTGGGGACCCAGGAGGGAGGACTTTG...GGCGTGTCTTTTGCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTCCACAAAGTCCTCCCTCCTGGGTCCCCAGCTGGAATACCACCTTCTTCCTTTTCTATGGGCTTCCCGTaGGCCCTGAGTGTGCTCGGC +
Preference number: 4 (lower is better)
Translates to: LHKVLPPGSPAGIPPSSFSMGFP*ALSVLG
Trigger: GCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGA...AAAGGAAGAAGGTGGTATTCCAGCTGGGGACCCAGGAGGGAGGACTTTGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CACCACTCAATGTCTGGGTACCCACGGCACGTGGCAGCTACAAGACCAAGAAGGCAGAACACCCCTGGCTaGGCTGCCTCAGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: HHSMSGYPRHVAATRPRRQNTPG*AASVDS
Trigger: TGAGTCCACTGAGGCAGCCCAGCCAGGGGTGTTCTG...CCTTCTTGGTCTTGTAGCTGCCACGTGCCGTGGGTACCCAGACATTGAGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CCA 90 bp CACCACTCAATGTCTGGGTACCCACGGCACGTGGCAGCTACAAGACCAAGAAGGGCGCTCTTCCCCCTGTaGGGTTCCAAACCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: HHSMSGYPRHVAATRPRRALFPL*GSKPLG
Trigger: ACCCAGAGGTTTGGAACCCCACAGGGGGAAGAGCGC...CCTTCTTGGTCTTGTAGCTGCCACGTGCCGTGGGTACCCAGACATTGAGTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CCA 90 bp GCCCTGCCTCATATGCTAGCTGTCCCCAGGGTGCTGGCGGTGGCTTCTCAGCAACAACCCCTGCCCATCTaGGGAAAGAATGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: ALPHMLAVPRVLAVASQQQPLPI*GKNVLQ
Trigger: CTGCAAGACATTCTTTCCCCAGATGGGCAGGGGTTG...TTGCTGAGAAGCCACCGCCAGCACCCTGGGGACAGCTAGCATATGAGGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR TCA 90 bp ACGCCCTCCATCACCACACACTCTCCAGCCACATCTTGGCCCCATCCTGAGATTCTTTTGTCATCCCTATaGGGCTCTTCTCCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: TPSITTHSPATSWPHPEILLSSL*GSSPGA
Trigger: CGCCCCCGGAGAAGAGCCTCATAGGGATGACAAAAG...AATCTCAGGATGGGGCCAAGATGTGGCTGGAGAGTGTGTGGTGATGGAGGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CGTGGCAGCTACAAGACCAAGAAGGCAGGGATGGCAAGTTATCTGCTGCCCCTCCTTTTGTCATCCCTATaGGGCTCTTCTCCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: RGSYKTKKAGMASYLLPLLLSSL*GSSPGA
Trigger: CGCCCCCGGAGAAGAGCCTCATAGGGATGACAAAAG...GAGGGGCAGCAGATAACTTGCCATCCCTGCCTTCTTGGTCTTGTAGCTGCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR TCA 90 bp CTCCACAAAGTCCTCCCTCCTGGGTCCCCAGCTGGAATACCACCTTCTTCCTTTCTGGGAGAGTGCCCGTaGCAATGCCGTGTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: LHKVLPPGSPAGIPPSSFLGECP*QCRVVL
Trigger: GAGGACAACACGGCATTGTCACGGGCACTCTCCCAG...AAAGGAAGAAGGTGGTATTCCAGCTGGGGACCCAGGAGGGAGGACTTTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGCAAAAAGCCCATCCTTGACTaGCGAGACTCTGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LMSLKSMGFPWALSVLGKKPILD*RDSGLP
Trigger: GGGGAGGCCAGAGTCTCGTCAGTCAAGGATGGGCTT...TTTGCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp AGCGCGGACTATGGCCAGGAGGCGAATGTAGTCACTCAGGAGCTCAGCAAGGAGATTCTTGGGCTCAAGTaGTTCTCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SADYGQEANVVTQELSKEILGLK*FSHLGL
Trigger: GAGGCCGAGGTGGGAGAATCACTTGAGCCCAAGAAT...CTCCTTGCTGAGCTCCTGAGTGACTACATTCGCCTCCTGGCCATAGTCCGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR TCA 90 bp TCAGCACTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAGGTTCCATACCGGAGCCCAAACGCTaGACTAGCCAAGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SALRSPNAELAKGKAGSIPEPKR*TSQGES
Trigger: GCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGG...TATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR GCA 90 bp GCTGGTCGAAGGCAGCGCGGACTATGGCCAGGAGGCGAATGTAGTCACTCAGGAAGTTTCCGTAAGCGCTaGTCCTCACACTCTACCTCC +
Preference number: 4 (lower is better)
Translates to: AGRRQRGLWPGGECSHSGSFRKR*SSHSTS
Trigger: GGAGGTAGAGTGTGAGGAGCAGCGCTTACGGAAACT...TCCTGAGTGACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCTTCGACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR GCA 90 bp CCGTGTTGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTTGCAAACTGGGCTGGCCTCCCGCTTCTTCTaGAGTGTGGCTTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: PCCPQSSQAWLDSLQTGLASRFF*SVAWAS
Trigger: GGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGC...CAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR GCA 90 bp GGCCTCCCCTCCACCTACAGATTCTTTCCTGTGGCCTCAGCAGTGAGGCACCCTATCTCGTCCTTGGCCTaGTGCAGCTTATCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: GLPSTYRFFPVASAVRHPISSLA*CSLSGL
Trigger: CAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGAT...AGGGTGCCTCACTGCTGAGGCCACAGGAAAGAATCTGTAGGTGGAGGGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp CCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAGCGCCTACCTCACCCTaGCAGACAGACAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PRQDASLGVHQGGGGQCIAPTSP*QTDREA
Trigger: TGCCTCCCTGTCTGTCTGGCAGGGTGAGGTAGGCGC...TATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp GTCCAGCCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGGCAACTGTAGCTCACTaGAACCTCAACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VQPRQDASLGVHQGGGGQATVAH*NLNLLG
Trigger: GCCCAGGAGGTTGAGGTTGCAGTGAGCTACAGTTGC...CTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGGCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp GGCCTCCCCTCCACCTACAGATTCTTTCCTGTGGCCTCAGCAGTGAGGCACCCTGGAAGGGAGAAAGGGTaGTTAAGGTACCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLPSTYRFFPVASAVRHPGREKG*LRYQAQ
Trigger: CTGGGCTTGGTACCTTAAGCACCCTTTCTCCCTTCC...AGGGTGCCTCACTGCTGAGGCCACAGGAAAGAATCTGTAGGTGGAGGGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGGCACCACTCAATGTCTaGGTACCCACGGCACGTGGC +
Preference number: 4 (lower is better)
Translates to: QGGGGQCIKRQRHTGGLWAPLNV*VPTARG
Trigger: GCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGC...CCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp GCTTGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGCAGAGCTCCCAAGCATaGCTAGACTCTTTGCAAACT +
Preference number: 4 (lower is better)
Translates to: AWASCQRCHVFMRWSKAAQSSQA*LDSLQT
Trigger: AGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTG...CGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CCA 90 bp TGGCCTCCCCTGGCTAGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTCGAGGATCTCGTCCTTaGCCTGCTGCAGCTTATCAG +
Preference number: 4 (lower is better)
Translates to: WPPLARPAEICVNTLWLCRGSRP*PAAAYQ
Trigger: CTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCG...ACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCTAGCCAGGGGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTTGCACCACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGACTCTGGCCTCCCCTaGCTAGACCGGCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: LAPLALPLVLHLCTGNQNDSGLP*LDRQRS
Trigger: AGATCTCTGCCGGTCTAGCCAGGGGAGGCCAGAGTC...ATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTCCACAAAGTCCTCCCTCCTGGGTCCCCAGCTGGAATACCACCTTCTTCCTTTGACTCTGGCCTCCCCTaGCTAGACCGGCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: LHKVLPPGSPAGIPPSSFDSGLP*LDRQRS
Trigger: AGATCTCTGCCGGTCTAGCCAGGGGAGGCCAGAGTC...AAAGGAAGAAGGTGGTATTCCAGCTGGGGACCCAGGAGGGAGGACTTTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AGGAGCTTCAAAGCCCACTCTGACCAGTATAGCTTGAGCAGCTGTGGACACAGCGACCTGGGGCCCCAGTaGCAGGAGCGTCTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: RSFKAHSDQYSLSSCGHSDLGPQ*QERLWD
Trigger: ATCCCAAAGACGCTCCTGCCACTGGGGCCCCAGGTC...GCTGTGTCCACAGCTGCTCAAGCTATACTGGTCAGAGTGGGCTTTGAAGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAGCAGCGTCACACAGGTaGGCTCTGGGGTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PRQDASLGVHQGGGGQCIAASHR*ALGSLV
Trigger: GACCAAGGACCCCAGAGCCCACCTGTGTGACGCTGC...TATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp GGTCCATCAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGGGGACAGTTGGTCGTaGGGACAGGGAGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GPSRWRRTVYKKAASHRWGDSWS*GQGGRG
Trigger: ACCCCTTCCTCCCTGTCCCCACGACCAACTGTCCCC...CCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTGATGGACC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp GCTGGTCGAAGGCAGCGCGGACTATGGCCAGGAGGCGAATGTAGTCACTCAGGATCTCCAGCCACATCTTaGCCCCATCCTGAGATTTCC +
Preference number: 4 (lower is better)
Translates to: AGRRQRGLWPGGECSHSGSPATS*PHPEIS
Trigger: GGAAATCTCAGGATGGGGCCAAGATGTGGCTGGAGA...TCCTGAGTGACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCTTCGACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp CAAACCTCTGGGTGGGATGGGCCCTGGGTTCATTTGGAACCAGCAGAACACCCCCCAAGAAGGCAGGGATaGCAAGTTATCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: QTSGWDGPWVHLEPAEHPPRRQG*QVICCP
Trigger: GGGGCAGCAGATAACTTGCCATCCCTGCCTTCTTGG...GGGGTGTTCTGCTGGTTCCAAATGAACCCAGGGCCCATCCCACCCAGAGGTTTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CCA 90 bp GTGTTGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTTGCAAACTGGGCTGTGGGGGTTCCAAACCTCTaGGTGGGATGGGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VLSSELPSMARLFANWAVGVPNL*VGWALG
Trigger: ACCCAGGGCCCATCCCACCCAGAGGTTTGGAACCCC...CACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CCA 90 bp GGGGTCAGAGAAGCTCCAATGCTTACCAGGTCAGGTGGGTATCCAAATGGGACTCTGTCCCCAGGGTGCTaGCGGTGGCTTCTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GVREAPMLTRSGGYPNGTLSPGC*RWLLSK
Trigger: CTTGCTGAGAAGCCACCGCCAGCACCCTGGGGACAG...AGTCCCATTTGGATACCCACCTGACCTGGTAAGCATTGGAGCTTCTCTGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR TCA 90 bp GGTAATGTGGAAAGCGCCTCCCAGGTCCTATCAGACACCCATGTGATGTGGCTCGGGGCGGAGGGACAATaGAGCCATTCTGAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: GNVESASQVLSDTHVMWLGAEGQ*SHSESA
Trigger: AGCACTCTCAGAATGGCTTCATTGTCCCTCCGCCCC...GAGCCACATCACATGGGTGTCTGATAGGACCTGGGAGGCGCTTTCCACATTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CTTGCACCACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATCTTTTGTCATCCCTATaGGGCTCTTCTCCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: LAPLALPLVLHLCTGNQNLLSSL*GSSPGA
Trigger: CGCCCCCGGAGAAGAGCCTCATAGGGATGACAAAAG...ATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATACTGGGAGAGTGCCCGTaGCAATGCCGTGTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PRQDASLGVHQGGGGQCILGECP*QCRVVL
Trigger: GAGGACAACACGGCATTGTCACGGGCACTCTCCCAG...TATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR TCA 90 bp GCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGCGGACTATGGCCAGGAGGCCTTCACACAGTCTACTaGGGATGTGTTTTGATGGGT +
Preference number: 4 (lower is better)
Translates to: AAMSSCAGRRQRGLWPGGLHTVY*GCVLMG
Trigger: ACCCATCAAAACACATCCTCAGTAGACTGTGTGAAG...GCCTCCTGGCCATAGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR TCA 90 bp CCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATATGTGTGTGCAACTCCTaGGGGCTCTTGCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PRQDASLGVHQGGGGQCICVCNS*GLLLAG
Trigger: GCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACA...TATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GTCCAGCCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGCCAGCTGCTGCTGTaGGTAAAGGAGTGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: VQPRQDASLGVHQGGGGQCQLLL*VKECLK
Trigger: CTTGAGACACTCCTTTACTCACAGCAGCAGCTGGCA...CTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGGCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR TCA 90 bp GCCTCGAGGTCTGGAAGGGAGGTGGCCCTGCCTCATATGCTAGCTGTCCCCAGGTCCCAGCACTTCTTCTaGTTATTTTGTGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ASRSGREVALPHMLAVPRSQHFF*LFCVLS
Trigger: GGACAGCACACAAAATAATCAGAAGAAGTGCTGGGA...CCTGGGGACAGCTAGCATATGAGGCAGGGCCACCTCCCTTCCAGACCTCGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR GCA 90 bp ATCCAGGCATGTGCGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGCTGCCATGTCTTCATaGGCTGGTCGAAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: IQACAHCSTDVSSYVWSQAAMSS*AGRRQR
Trigger: GCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGC...CTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCGCACATGCCTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TCAGCACTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAGGTTCCATATGGCCCTTCCCCTGGTaGTGCATCTGTGTACAGGGA +
Preference number: 4 (lower is better)
Translates to: SALRSPNAELAKGKAGSIWPFPW*CICVQG
Trigger: TCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCA...TATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp ACATTTGCAATCAGTTTCCATGAGGTGTCGGCGCTGTTGGGAAGGACTGGGAGAGCGCCTACCTCACCCTaGCAGACAGACAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TFAISFHEVSALLGRTGRAPTSP*QTDREA
Trigger: TGCCTCCCTGTCTGTCTGGCAGGGTGAGGTAGGCGC...TCTCCCAGTCCTTCCCAACAGCGCCGACACCTCATGGAAACTGATTGCAAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp CCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATACCTGGCTGCTCTTCCTaGCTCCAGTCTCACGCCTTC +
Preference number: 4 (lower is better)
Translates to: PRQDASLGVHQGGGGQCIPGCSS*LQSHAF
Trigger: GAAGGCGTGAGACTGGAGGCAGGAAGAGCAGCCAGG...TATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp CTATTGCCTCATGTGTTACAAAGGGTTTCATTGTCTGCCCAGTGTCTGGGCCAGCACTGCCCCCACCACTaGTTCCCCTCCCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: LLPHVLQRVSLSAQCLGQHCPHH*FPSHLP
Trigger: GGGCAGATGGGAGGGGAAGCAGTGGTGGGGGCAGTG...CTGGCCCAGACACTGGGCAGACAATGAAACCCTTTGTAACACATGAGGCAATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTGGGATCACACCAGCTCGAAGTCCAGTCCTCATCTTCAGCACTCCGGAGCCCAGGTACCCACGGCACGTaGCAGCTCTTCTTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LGSHQLEVQSSSSALRSPGTHGT*QLFFFQ
Trigger: TTGGAAAAAGAAGAGCTGCCACGTGCCGTGGGTACC...TGGGCTCCGGAGTGCTGAAGATGAGGACTGGACTTCGAGCTGGTGTGATCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTCCACAAAGTCCTCCCTCCTGGGTCCCCAGCTGGAATACCACCTTCTTCCTTTTCCACCTCAGCCAGCTaGGAGAGTGCCCGTGACAAT +
Preference number: 4 (lower is better)
Translates to: LHKVLPPGSPAGIPPSSFSTSAS*ESARDN
Trigger: ATTGTCACGGGCACTCTCCCAGCTGGCTGAGGTGGA...AAAGGAAGAAGGTGGTATTCCAGCTGGGGACCCAGGAGGGAGGACTTTGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GCTGGTCGAAGGCAGCGCGGACTATGGCCAGGAGGCGAATGTAGTCACTCAGGAGGAAGAAGTCATTGTTaGCCTGTTCCTGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: AGRRQRGLWPGGECSHSGGRSHC*PVPGGA
Trigger: AGCTCCACCAGGAACAGGCCAACAATGACTTCTTCC...TCCTGAGTGACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCTTCGACCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CCA 90 bp GTGTTGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTTGCAAACTGGGCTGTGTTCTGCAGTGTGGCTTaGGCATCCTGCCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VLSSELPSMARLFANWAVFCSVA*ASCQRC
Trigger: GCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAA...CACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CCA 90 bp AGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGGCTTCTTCTGCAGTGTaGCTTGGGCATCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RPAEICVNTLWLCVQLLRASSAV*LGHPAS
Trigger: GCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGC...CCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CCGTGTTGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTTGCAAACTGGGCTGGCTTATCAGGCTTGTTaGCCCACAGCAGCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: PCCPQSSQAWLDSLQTGLAYQAC*PTAAEP
Trigger: AGGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGC...CAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CCA 90 bp CACGTGGCAGCTACAAGACCAAGAAGGCAGGGATGGCAAGTTATCTGCTGCCCCCGAGGATCTCGTCCTTaGCCTGCTGCAGCTTATCAG +
Preference number: 4 (lower is better)
Translates to: HVAATRPRRQGWQVICCPRGSRP*PAAAYQ
Trigger: CTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCG...GGGGCAGCAGATAACTTGCCATCCCTGCCTTCTTGGTCTTGTAGCTGCCACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CCA 90 bp CAAAGGAGCTTCAAAGCCCACTCTGACCAGTATAGCTTGAGCAGCTGTGGACACCCTGAGGGCTCTTGCTaGCAGGCTACCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QRSFKAHSDQYSLSSCGHPEGSC*QATSWA
Trigger: TGCCCAGGAGGTAGCCTGCCAGCAAGAGCCCTCAGG...GTGTCCACAGCTGCTCAAGCTATACTGGTCAGAGTGGGCTTTGAAGCTCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GGGCTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGTGTGTGAACACCCTTTaGCTGTGTGTGCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: GLDVLEVYGLPVGPECARCVNTL*LCVQLL
Trigger: CAGGAGTTGCACACACAGCCAAAGGGTGTTCACACA...CCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGGGTAAATACTTGCACCACTaGCCCTTCCCCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GGGGQCIKRQRHTGGLWGKYLHH*PFPWCC
Trigger: GCAGCACCAGGGGAAGGGCCAGTGGTGCAAGTATTT...ACCCCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GGCCTCCCCTCCACCTACAGATTCTTTCCTGTGGCCTCAGCAGTGAGGCACCCTGACACCCATGTGATGTaGCTCCTGCTCGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: GLPSTYRFFPVASAVRHPDTHVM*LLLVFL
Trigger: GAGAAAAACGAGCAGGAGCCACATCACATGGGTGTC...AGGGTGCCTCACTGCTGAGGCCACAGGAAAGAATCTGTAGGTGGAGGGGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AAAAGACACGCCCTCCATCACCACACACTCTCCAGCCACATCTTGGCCCCATCCGCGACAATGGTAATGTaGAAAGCGCCTCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KRHALHHHTLSSHILAPSATMVM*KAPPRS
Trigger: GGACCTGGGAGGCGCTTTCCACATTACCATTGTCGC...GGATGGGGCCAAGATGTGGCTGGAGAGTGTGTGGTGATGGAGGGCGTGTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GTCCAGCCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTCTCCAGCCACATCTTaGCCCCATCCTGAGATTTCC +
Preference number: 4 (lower is better)
Translates to: VQPRQDASLGVHQGGGGQSPATS*PHPEIS
Trigger: GGAAATCTCAGGATGGGGCCAAGATGTGGCTGGAGA...CTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGGCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CACCACTCAATGTCTGGGTACCCACGGCACGTGGCAGCTACAAGACCAAGAAGGGGTACCCACGGCACGTaGCAGCTACAAGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: HHSMSGYPRHVAATRPRRGTHGT*QLQDQE
Trigger: TTCTTGGTCTTGTAGCTGCCACGTGCCGTGGGTACC...CCTTCTTGGTCTTGTAGCTGCCACGTGCCGTGGGTACCCAGACATTGAGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR CAA 72 bp TCAGCCAGCTGGGAGAGTGCCCGTGACAATGCCGTGTaGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTT +
Preference number: 4 (lower is better)
Translates to: SASWESARDNAV*SSELPSMARLF
Trigger: AAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACACGGCATTGTCACGGGCACTCTCCCAGCTGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR TCA 90 bp GGCTTCCTCAGCAGCCACGGCCCTTTAGACTCAATCAGCGCTCTTCCCCCTGTGTTTCCAAGAACTCTCTaGCGTCAGGGTCCTGTAACA +
Preference number: 4 (lower is better)
Translates to: GFLSSHGPLDSISALPPVFPRTL*RQGPVT
Trigger: TGTTACAGGACCCTGACGTCAGAGAGTTCTTGGAAA...CACAGGGGGAAGAGCGCTGATTGAGTCTAAAGGGCCGTGGCTGCTGAGGAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR TCA 90 bp TCAGCACTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAGGTTCCATACGGCAGAGATCTGTGTaGACACCCTTTGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SALRSPNAELAKGKAGSIRQRSV*TPFGCV
Trigger: CACACAGCCAAAGGGTGTTCACACAGATCTCTGCCG...TATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGCAACTGACCAGTATAGCTTaGGCAGCTGTGGACACAGCT +
Preference number: 4 (lower is better)
Translates to: LDVLEVYGLPVGPECARQLTSIA*AAVDTA
Trigger: AGCTGTGTCCACAGCTGCTCAAGCTATACTGGTCAG...TTGCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GGTCCATCAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGCCCACCAAAGAGAACTaGTACAGCAGGACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GPSRWRRTVYKKAASHRWPTKEN*YSRTWG
Trigger: GCCCCAGGTCCTGCTGTATCAGTTCTCTTTGGTGGG...CCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTGATGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGGGTTGCCAGCTGCTGCTGTaGGTAAAGGAGTGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: GGGGQCIKRQRHTGGLWGCQLLL*VKECLK
Trigger: CTTGAGACACTCCTTTACTCACAGCAGCAGCTGGCA...ACCCCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR TCA 90 bp CAAAGGAGCTTCAAAGCCCACTCTGACCAGTATAGCTTGAGCAGCTGTGGACACCCGGAGCCCAAACGCTaGACTAGCCAAGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: QRSFKAHSDQYSLSSCGHPEPKR*TSQGES
Trigger: GCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGG...GTGTCCACAGCTGCTCAAGCTATACTGGTCAGAGTGGGCTTTGAAGCTCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp GGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGGGTAGTTTCCGTAAGCGCTaGTCCTCACACTCTACCTCC +
Preference number: 4 (lower is better)
Translates to: GGGGQCIKRQRHTGGLWGSFRKR*SSHSTS
Trigger: GGAGGTAGAGTGTGAGGAGCAGCGCTTACGGAAACT...ACCCCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR GCA 90 bp TCAGGAGCTCTTGGATCACCCTATCTAGAGGCAGAGGGCATGGCTTTCATGTCTGCTGCCATGTCTTCATaGGCTGGTCGAAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: SGALGSPYLEAEGMAFMSAAMSS*AGRRQR
Trigger: GCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGC...AGACATGAAAGCCATGCCCTCTGCCTCTAGATAGGGTGATCCAAGAGCTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp ACATTTGCAATCAGTTTCCATGAGGTGTCGGCGCTGTTGGGAAGGACTGGGAGACCTGGCTGCTCTTCCTaGCTCCAGTCTCACGCCTTC +
Preference number: 4 (lower is better)
Translates to: TFAISFHEVSALLGRTGRPGCSS*LQSHAF
Trigger: GAAGGCGTGAGACTGGAGGCAGGAAGAGCAGCCAGG...TCTCCCAGTCCTTCCCAACAGCGCCGACACCTCATGGAAACTGATTGCAAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp CTCCACAAAGTCCTCCCTCCTGGGTCCCCAGCTGGAATACCACCTTCTTCCTTTGCTTCCCCTCCCATCTaGCCCAAACCTATTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LHKVLPPGSPAGIPPSSFASPPI*PKPIAS
Trigger: TGAGGCAATAGGTTTGGGGCAGATGGGAGGGGAAGC...AAAGGAAGAAGGTGGTATTCCAGCTGGGGACCCAGGAGGGAGGACTTTGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp GCCCTGCCTCATATGCTAGCTGTCCCCAGGGTGCTGGCGGTGGCTTCTCAGCAAGGCCTACTGTGTGGATaGCTTCAGGTCTTTAAGAAA +
Preference number: 4 (lower is better)
Translates to: ALPHMLAVPRVLAVASQQGLLCG*LQVFKK
Trigger: TTTCTTAAAGACCTGAAGGCATCCACACAGTAGGCC...TTGCTGAGAAGCCACCGCCAGCACCCTGGGGACAGCTAGCATATGAGGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR CCA 90 bp GGGCTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGAGGATAGCTCCACTGTaGCATCTGCAAAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: GLDVLEVYGLPVGPECARRIAPL*HLQRDP
Trigger: AGGATCTCTTTGCAGATGCCACAGTGGAGCTATCCT...CCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559844.6
CDS-3UTR CCA 90 bp CAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGTGGCAGGCTACCTCCTaGGCACAGACAGTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: QGGGGQCIKRQRHTGGLWWQATS*AQTVEL
Trigger: AAGCTCTACTGTCTGTGCCCAGGAGGTAGCCTGCCA...CCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGGCCTCCCCTGGCTAGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTTGTGTGAACACCCTTTaGCTGTGTGTGCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: WPPLARPAEICVNTLWLCCVNTL*LCVQLL
Trigger: CAGGAGTTGCACACACAGCCAAAGGGTGTTCACACA...ACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCTAGCCAGGGGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp ACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGTTGGGATGGAGGGGCTaGAGGTGGCAAGGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: TGPSPGAASVYRESECLLLGWRG*RWQGSH
Trigger: ATGGGAGCCTTGCCACCTCCAGCCCCTCCATCCCAA...CAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TCAGGAGCTCTTGGATCACCCTATCTAGAGGCAGAGGGCATGGCTTTCATGTCTTGGCAGGAGCGTCTTTaGGATGGAGGGGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SGALGSPYLEAEGMAFMSWQERL*DGGAGG
Trigger: ACCTCCAGCCCCTCCATCCCAAAGACGCTCCTGCCA...AGACATGAAAGCCATGCCCTCTGCCTCTAGATAGGGTGATCCAAGAGCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGGCCTCCCCTGGCTAGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTTGGTCCATTAGGAGATaGCCTTTGCCTCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: WPPLARPAEICVNTLWLCWSIRR*PLPQEG
Trigger: TCCTTCCTGAGGCAAAGGCCATCTCCTAATGGACCA...ACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCTAGCCAGGGGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAGTAACTGGGGACAGTTaGTCGTGGGGACAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PRQDASLGVHQGGGGQCIVTGDS*SWGQGG
Trigger: TCCTCCCTGTCCCCACGACCAACTGTCCCCAGTTAC...TATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp TGGCCTCCCCTGGCTAGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTAATGCAAAAATTAGCTaGGTGTGGGGGCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: WPPLARPAEICVNTLWLCNAKIS*VWGQAP
Trigger: AGGTGCCTGCCCCCACACCCAGCTAATTTTTGCATT...ACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCTAGCCAGGGGAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGCAACAGTCTCACGCCTTCTaGTGTGTCCAGATCACGAAG +
Preference number: 4 (lower is better)
Translates to: LDVLEVYGLPVGPECARQQSHAF*CVQITK
Trigger: CTTCGTGATCTGGACACACCAGAAGGCGTGAGACTG...TTGCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTTCTCTGTCTGCCCAGTGTCTaGGCCAGAAGCTTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: VAQMCPPMFGARDPHYLLCLPSV*ARSLRG
Trigger: GCCCCGCAAGCTTCTGGCCCAGACACTGGGCAGACA...GAGAAGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GTGTTGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTTGCAAACTGGGCTGTGGCAACCTCAACCTCCTaGGCTCAGGTGATGTTCCCG +
Preference number: 4 (lower is better)
Translates to: VLSSELPSMARLFANWAVATSTS*AQVMFP
Trigger: CGGGAACATCACCTGAGCCCAGGAGGTTGAGGTTGC...CACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp GGCCTCCCCTCCACCTACAGATTCTTTCCTGTGGCCTCAGCAGTGAGGCACCCTAGCCTGAACCTTTGCTaGGGCCCATGGAGTTATAAA +
Preference number: 4 (lower is better)
Translates to: GLPSTYRFFPVASAVRHPSLNLC*GPWSYK
Trigger: TTTATAACTCCATGGGCCCCAGCAAAGGTTCAGGCT...AGGGTGCCTCACTGCTGAGGCCACAGGAAAGAATCTGTAGGTGGAGGGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGGGGAAAGAATGTCTTGCAGGGGTCAGAGAAGCTCCAATGCTTACCAGGTCAGCCAGGGTGCTGGCGGTaGCTTCTCAGCAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: WGKNVLQGSEKLQCLPGQPGCWR*LLSKWS
Trigger: ACTCCACTTGCTGAGAAGCCACCGCCAGCACCCTGG...CTGACCTGGTAAGCATTGGAGCTTCTCTGACCCCTGCAAGACATTCTTTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR TCA 90 bp TGGCTTGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGGCTCTTTCCTATGGTTaGCTAGAGTTTCTACAACAG +
Preference number: 4 (lower is better)
Translates to: WLGHPASAAMSSCAGRRQALSYG*LEFLQQ
Trigger: CTGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGC...CTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR TCA 90 bp TCCTCATCTTCAGCACTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCACTGACCAGTATAGCTTaGGCAGCTGTGGACACAGCT +
Preference number: 4 (lower is better)
Translates to: SSSSALRSPNAELAKGKALTSIA*AAVDTA
Trigger: AGCTGTGTCCACAGCTGCTCAAGCTATACTGGTCAG...TGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGAAGATGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp AGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGTGCCAGCTGCTGCTGTaGGTAAAGGAGTGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: RPAEICVNTLWLCVQLLRCQLLL*VKECLK
Trigger: CTTGAGACACTCCTTTACTCACAGCAGCAGCTGGCA...CCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCCTCCATGGGCCTCACTaGCTTTACCCTACACCAAGC +
Preference number: 4 (lower is better)
Translates to: LALPLVLHLCTGNQNVYCLHGPH*LYPTPS
Trigger: GCTTGGTGTAGGGTAAAGTCAGTGAGGCCCATGGAG...GCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTTCTCCCGGAGCCCAAACGCTaGACTAGCCAAGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: VAQMCPPMFGARDPHYLLPEPKR*TSQGES
Trigger: GCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGG...GAGAAGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR TCA 90 bp GGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGGGTCTCACTGGCTTCCCATaGCATCCCTTTTCACAGCAA +
Preference number: 4 (lower is better)
Translates to: GGGGQCIKRQRHTGGLWGLTGFP*HPFSQQ
Trigger: TTGCTGTGAAAAGGGATGTCATGGGAAGCCAGTGAG...ACCCCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560829.5
CDS-3UTR TCA 90 bp CGGAGGGACAATGAAGCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGAGGTCGGGGCTGCAGTaGGCCATGACCACACCACTG +
Preference number: 4 (lower is better)
Translates to: RRDNEAILRVLLGKLLIKRSGLQ*AMTTPL
Trigger: CAGTGGTGTGGTCATGGCTCACTGCAGCCCCGACCT...CTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGCTTCATTGTCCCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559389.1
CDS-3UTR GCA 90 bp GGTAATGTGGAAAGCGCCTCCCAGGTCCTATCAGACACCCATGTGATGTGGCTCCTCCACTGTGGCATCTaGAAAGAGATCCTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: GNVESASQVLSDTHVMWLLHCGI*KEILWL
Trigger: GAGCCACAGGATCTCTTTGCAGATGCCACAGTGGAG...GAGCCACATCACATGGGTGTCTGATAGGACCTGGGAGGCGCTTTCCACATTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559844.6
CDS-3UTR GCA 90 bp TTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGCAAAAGTTTCCGTAAGCGCTaGTCCTCACACTCTACCTCC +
Preference number: 4 (lower is better)
Translates to: LMSLKSMGFPWALSVLGKSFRKR*SSHSTS
Trigger: GGAGGTAGAGTGTGAGGAGCAGCGCTTACGGAAACT...TTTGCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp AGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAAAAGTGGCTTGGGCATCCTaGCAGCGCTGCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: RQDASLGVHQGGGGQCIKVAWAS*QRCHVF
Trigger: GAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCAC...TTTTATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR GCA 90 bp CTTGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGCGTTATATATAAGACTTaGCATCAGAGGGCAAGACTC +
Preference number: 4 (lower is better)
Translates to: LGHPASAAMSSCAGRRQRVIYKT*HQRARL
Trigger: GAGTCTTGCCCTCTGATGGCAAGTCTTATATATAAC...GCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR GCA 90 bp CTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCCCCTTCCCCTGGTGCTaGATCTGTGTACAGGGAATC +
Preference number: 4 (lower is better)
Translates to: LALPLVLHLCTGNQNVYCPFPWC*ICVQGI
Trigger: GATTCCCTGTACACAGATGCAGCACCAGGGGAAGGG...GCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GGCTTCCTCAGCAGCCACGGCCCTTTAGACTCAATCAGCGCTCTTCCCCCTGTGAGATCCTGTGGCTCTTaGTCTTGTTCTTCATGGATC +
Preference number: 4 (lower is better)
Translates to: GFLSSHGPLDSISALPPVRSCGS*SCSSWI
Trigger: GATCCATGAAGAACAAGACCAAGAGCCACAGGATCT...CACAGGGGGAAGAGCGCTGATTGAGTCTAAAGGGCCGTGGCTGCTGAGGAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CCA 90 bp GTCCAGCCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGAGGATAGCTCCACTGTaGCATCTGCAAAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: VQPRQDASLGVHQGGGGQRIAPL*HLQRDP
Trigger: AGGATCTCTTTGCAGATGCCACAGTGGAGCTATCCT...CTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGGCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp CTTGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGCGCTAGCTCTTTCCTATaGTTGACTAGAGTTTCTACA +
Preference number: 4 (lower is better)
Translates to: LGHPASAAMSSCAGRRQRASSFL*LTRVST
Trigger: TGTAGAAACTCTAGTCAACCATAGGAAAGAGCTAGC...GCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CCA 90 bp TGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTTGCAAACTGGGCTGTGTTCACATGTCTTCATGCGCTaGTCGAAGGCAGCGCGGACT +
Preference number: 4 (lower is better)
Translates to: CPQSSQAWLDSLQTGLCSHVFMR*SKAART
Trigger: AGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATG...TGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CCA 90 bp CACCTGTTAAAAAGAAATACTTGCACCACTGGCCCTTCCCCTGGTGCTGCATCTTGGCAGGAGCGTCTTTaGGATGGAGGGGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: HLLKRNTCTTGPSPGAASWQERL*DGGAGG
Trigger: ACCTCCAGCCCCTCCATCCCAAAGACGCTCCTGCCA...AGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAGTATTTCTTTTTAACAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAAGGGGACAGTTGGTCGTaGGGACAGGGAGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LVHLSQIRHDPVQTWSREGDSWS*GQGGRG
Trigger: ACCCCTTCCTCCCTGTCCCCACGACCAACTGTCCCC...TTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGCAAGAAAAGGGGGCAGACTaGAATAAACCTACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LDVLEVYGLPVGPECARQEKGAD*NKPTGL
Trigger: CAGCCCTGTAGGTTTATTCCAGTCTGCCCCCTTTTC...TTGCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AAAAGACACGCCCTCCATCACCACACACTCTCCAGCCACATCTTGGCCCCATCCGAAAAGGGGGCAGACTaGAATAAACCTACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KRHALHHHTLSSHILAPSEKGAD*NKPTGL
Trigger: CAGCCCTGTAGGTTTATTCCAGTCTGCCCCCTTTTC...GGATGGGGCCAAGATGTGGCTGGAGAGTGTGTGGTGATGGAGGGCGTGTCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp ACGCCCTCCATCACCACACACTCTCCAGCCACATCTTGGCCCCATCCTGAGATTAAGGACCGATCTCAGTaGTTCCGAAACTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TPSITTHSPATSWPHPEIKDRSQ*FRNSPE
Trigger: CTCAGGAGAGTTTCGGAACCACTGAGATCGGTCCTT...AATCTCAGGATGGGGCCAAGATGTGGCTGGAGAGTGTGTGGTGATGGAGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GCACTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAGGTTCCATACCTGGCAGAGCCTGCAACTaGGGAACAATCATTCAACAG +
Preference number: 4 (lower is better)
Translates to: ALRSPNAELAKGKAGSIPGRACN*GTIIQQ
Trigger: CTGTTGAATGATTGTTCCCCAGTTGCAGGCTCTGCC...AGGTATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGGGGCTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCTCCCATCTAGGGCATTaGAAAATGCCTGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: WGLMSLKSMGFPWALSVLSHLGH*KMPASD
Trigger: GTCTGAAGCAGGCATTTTCCAATGCCCTAGATGGGA...GAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp ACTAGAGTTTCTACAACAGCATGCAGTTTCCGTAAGCGCTGCTCCTCACACTCTCCAGCAGAACACCCCTaGCTGGGCTGCCTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: TRVSTTACSFRKRCSSHSPAEHP*LGCLSG
Trigger: TCCACTGAGGCAGCCCAGCCAGGGGTGTTCTGCTGG...AGAGTGTGAGGAGCAGCGCTTACGGAAACTGCATGCTGTTGTAGAAACTCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CCA 90 bp CTGCCTCATATGCTAGCTGTCCCCAGGGTGCTGGCGGTGGCTTCTCAGCAAGTGAAACAAAGACACACTTaGGTCCCTCAAGTAACAGGG +
Preference number: 4 (lower is better)
Translates to: LPHMLAVPRVLAVASQQVKQRHT*VPQVTG
Trigger: CCCTGTTACTTGAGGGACCCAAGTGTGTCTTTGTTT...CACTTGCTGAGAAGCCACCGCCAGCACCCTGGGGACAGCTAGCATATGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558040.5
3UTR CAA 72 bp GCAGGCTACCTCCTGGGCACAGACAGTAGAGCTTCTTaGAACCTCCTAAGGTTCAGGAGCTCTTGGATCACC +
Preference number: 4 (lower is better)
Translates to: AGYLLGTDSRAS*NLLRFRSSWIT
Trigger: GGTGATCCAAGAGCTCCTGAACCTTAGGAGGTTCAAAGAAGCTCTACTGTCTGTGCCCAGGAGGTAGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGAAGTCCCTTTCATATTaGGTCACCCGAGACTCCCAC +
Preference number: 4 (lower is better)
Translates to: QGGGGQCIKRQRHTGGLWKSLSY*VTRDSH
Trigger: GTGGGAGTCTCGGGTGACTCAATATGAAAGGGACTT...CCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR TCA 90 bp ACATCCAGGCATGTGCGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCATCTTGGCCCCATCCTaGGATTTCCAGGAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TSRHVRTVAQMCPPMFGAILAPS*DFQEFL
Trigger: GAGGAACTCCTGGAAATCTCAGGATGGGGCCAAGAT...GGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCGCACATGCCTGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR GCA 90 bp CCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATACTCCACTGTGGCATCTaGAAAGAGATCCTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PRQDASLGVHQGGGGQCILHCGI*KEILWL
Trigger: GAGCCACAGGATCTCTTTGCAGATGCCACAGTGGAG...TATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559844.6
ENST00000560829.5
CDS-3UTR GCA 90 bp GGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGGGTGTTTCTACAACAGCATaGAGTTTCCGTAAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GGGGQCIKRQRHTGGLWGVSTTA*SFRKRC
Trigger: GCAGCGCTTACGGAAACTGCATGCTGTTGTAGAAAC...ACCCCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR GCA 90 bp CGGAGGGACAATGAAGCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGGCTGCCATGTCTTCATaGGCTGGTCGAAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: RRDNEAILRVLLGKLLIKAAMSS*AGRRQR
Trigger: GCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGC...CTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGCTTCATTGTCCCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR GCA 90 bp GATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGCAAAAGGAATTTGTGGCTTCCTaGAAAGAGATCCTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: DVLEVYGLPVGPECARQKEFVAS*KEILWL
Trigger: GAGCCACAGGATCTCTTTGCAGGAAGCCACAAATTC...CTTTTGCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR GCA 90 bp CCGTGTTGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTTGCAAACTGGGCTGAAGGGTTTCATTGTCTaGCCAGTGTCTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: PCCPQSSQAWLDSLQTGLKGFIV*PVSGPE
Trigger: TTCTGGCCCAGACACTGGGCAGACAATGAAACCCTT...CAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR GCA 90 bp TGGCCTCCCCTGGCTAGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTTGCAACTGTAAACAGTaGTATGACGGGCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: WPPLARPAEICVNTLWLCCNCKQ*YDGHFW
Trigger: CCAGAAATGCCCGTCATAGCACTGTTTACAGTTGCA...ACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCTAGCCAGGGGAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TATGAGGCTCTTCTCCGGGGGCGGAGGGACAATGAAGCCATTCTGAGAGTGCTTAGACTCTTTGCAAACTaGGCTGTGTTCAGCGCTAGC +
Preference number: 4 (lower is better)
Translates to: YEALLRGRRDNEAILRVLRLFAN*AVFSAS
Trigger: GCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCT...AAGCACTCTCAGAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CCA 90 bp CAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGAGACTCTTTGCAAACTaGGCTGTGTTCAGCGCTAGC +
Preference number: 4 (lower is better)
Translates to: QGGGGQCIKRQRHTGGLWRLFAN*AVFSAS
Trigger: GCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCT...CCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp GATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGTCCACCTCAGCCAGCTaGGAGAGTGCCCGTGACAAT +
Preference number: 4 (lower is better)
Translates to: DASLGVHQGGGGQCIKRQSTSAS*ESARDN
Trigger: ATTGTCACGGGCACTCTCCCAGCTGGCTGAGGTGGA...CTGCCTTTTTATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp AGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGGGAAGAAGTCATTGTTaGCCTGTTCCTGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: RPAEICVNTLWLCVQLLRGRSHC*PVPGGA
Trigger: AGCTCCACCAGGAACAGGCCAACAATGACTTCTTCC...CCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTTCTCGCTTATCAGGCTTGTTaGCCCACAGCAGCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: VAQMCPPMFGARDPHYLLAYQAC*PTAAEP
Trigger: AGGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGC...GAGAAGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTTGCACCACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATTGTGTGAACACCCTTTaGCTGTGTGTGCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: LAPLALPLVLHLCTGNQNCVNTL*LCVQLL
Trigger: CAGGAGTTGCACACACAGCCAAAGGGTGTTCACACA...ATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp ACTAGAGTTTCTACAACAGCATGCAGTTTCCGTAAGCGCTGCTCCTCACACTCTTTGGGATGGAGGGGCTaGAGGTGGCAAGGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: TRVSTTACSFRKRCSSHSLGWRG*RWQGSH
Trigger: ATGGGAGCCTTGCCACCTCCAGCCCCTCCATCCCAA...AGAGTGTGAGGAGCAGCGCTTACGGAAACTGCATGCTGTTGTAGAAACTCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp TGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGTCGTGGGGAGACCTGGGGCCCCAGTaGCAGGAGCGTCTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: WKLNEITVRVTGDSWSWGDLGPQ*QERLWD
Trigger: ATCCCAAAGACGCTCCTGCCACTGGGGCCCCAGGTC...TCCCCACGACCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGCGGACTATGGCCAGCATGACAGTAATAACTaGGACAAGACTAATCAACTG +
Preference number: 4 (lower is better)
Translates to: PALPCLHALVEGSADYGQHDSNN*DKTNQL
Trigger: CAGTTGATTAGTCTTGTCCCAGTTATTACTGTCATG...CTGGCCATAGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp CAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGAATGCAAAAATTAGCTaGGTGTGGGGGCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: QGGGGQCIKRQRHTGGLWNAKIS*VWGQAP
Trigger: AGGTGCCTGCCCCCACACCCAGCTAATTTTTGCATT...CCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp ACGCCCTCCATCACCACACACTCTCCAGCCACATCTTGGCCCCATCCTGAGATTACTGACACTGAATACTaGGATCACACCAGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: TPSITTHSPATSWPHPEITDTEY*DHTSSK
Trigger: CTTCGAGCTGGTGTGATCCCAGTATTCAGTGTCAGT...AATCTCAGGATGGGGCCAAGATGTGGCTGGAGAGTGTGTGGTGATGGAGGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CCA 90 bp TATGAGGCTCTTCTCCGGGGGCGGAGGGACAATGAAGCCATTCTGAGAGTGCTTGGCAGAGCCTGCAACTaGGGAACAATCATTCAACAG +
Preference number: 4 (lower is better)
Translates to: YEALLRGRRDNEAILRVLGRACN*GTIIQQ
Trigger: CTGTTGAATGATTGTTCCCCAGTTGCAGGCTCTGCC...AAGCACTCTCAGAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp CTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCAGGTGTCGGCGCTGTTaGGAAGGACTGGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: LALPLVLHLCTGNQNVYCRCRRC*EGLGDK
Trigger: TTTATCTCCCAGTCCTTCCCAACAGCGCCGACACCT...GCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CAA 72 bp TGTTGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTaGCAAACTGGGCTGTGTTCAGCGCTAGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: CCPQSSQAWLDS*QTGLCSALALS
Trigger: GGAAAGAGCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR TCA 90 bp TGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCGGGGCGGAGGGACAATaGAGCCATTCTGAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: CPFISDQARPCPNMEQRIGAEGQ*SHSESA
Trigger: AGCACTCTCAGAATGGCTTCATTGTCCCTCCGCCCC...GATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAACTTTTGTCATCCCTATaGGGCTCTTCTCCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: LVHLSQIRHDPVQTWSRELLSSL*GSSPGA
Trigger: CGCCCCCGGAGAAGAGCCTCATAGGGATGACAAAAG...TTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp AGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGTTTTCGGACCACTGTTaGAATCCTCTCGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: RPAEICVNTLWLCVQLLRFSDHC*NPLEVP
Trigger: AGGGACTTCGAGAGGATTTCAACAGTGGTCCGAAAA...CCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGTTTTCGGACCACTGTTaGAATCCTCTCGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: QGGGGQCIKRQRHTGGLWFSDHC*NPLEVP
Trigger: AGGGACTTCGAGAGGATTTCAACAGTGGTCCGAAAA...CCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR TCA 90 bp GTACAGGGAATCAGAATGTTTACTGCGTTTTCTTGTCTCAGGTTGCCTCGCCCCGGAGTATTCCAGACCTaGTTCCCAACTGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VQGIRMFTAFSCLRLPRPGVFQT*FPTAPQ
Trigger: CTGGGGAGCAGTTGGGAATCAGGTCTGGAATACTCC...GGGGCGAGGCAACCTGAGACAAGAAAACGCAGTAAACATTCTGATTCCCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CACCTGTTAAAAAGAAATACTTGCACCACTGGCCCTTCCCCTGGTGCTGCATCTCGGCAGAGATCTGTGTaGACACCCTTTGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: HLLKRNTCTTGPSPGAASRQRSV*TPFGCV
Trigger: CACACAGCCAAAGGGTGTTCACACAGATCTCTGCCG...AGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAGTATTTCTTTTTAACAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp ACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCTGACCAGTATAGCTTaGGCAGCTGTGGACACAGCT +
Preference number: 4 (lower is better)
Translates to: TGPSPGAASVYRESECLLLTSIA*AAVDTA
Trigger: AGCTGTGTCCACAGCTGCTCAAGCTATACTGGTCAG...CAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp ATCCAGGCATGTGCGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGTATCAGACACCCATGTaGTGTGGCTCCTGCTCGTTT +
Preference number: 4 (lower is better)
Translates to: IQACAHCSTDVSSYVWSQYQTPM*CGSCSF
Trigger: AAACGAGCAGGAGCCACATCACATGGGTGTCTGATA...CTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCGCACATGCCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TGTTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGGTTCCGAAACTCTCCTaGGCTCTGGCCCCACCATAC +
Preference number: 4 (lower is better)
Translates to: CSCPFISDQARPCPNMEQVPKLS*ALAPPY
Trigger: GTATGGTGGGGCCAGAGCTCAGGAGAGTTTCGGAAC...CTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp ACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGATCTTGGCCCCATCCTaGGATTTCCAGGAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TGPSPGAASVYRESECLLILAPS*DFQEFL
Trigger: GAGGAACTCCTGGAAATCTCAGGATGGGGCCAAGAT...CAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTTCTCCTTTCACAGACAGTATaGACGCCAGGTGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VAQMCPPMFGARDPHYLLLSQTV*TPGGRA
Trigger: GGCTCTGCCACCTGGCGTTCATACTGTCTGTGAAAG...GAGAAGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GGTAATGTGGAAAGCGCCTCCCAGGTCCTATCAGACACCCATGTGATGTGGCTCATAAAGAGGGAAAGGTaGGCTGGGTCCTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: GNVESASQVLSDTHVMWLIKRER*AGSFHR
Trigger: TCTGTGAAAGGACCCAGCTCACCTTTCCCTCTTTAT...GAGCCACATCACATGGGTGTCTGATAGGACCTGGGAGGCGCTTTCCACATTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGCCTTTTCACAGCAACTaGAACCTACTTCCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: QGGGGQCIKRQRHTGGLWPFHSN*NLLPVR
Trigger: TCGGACAGGAAGTAGGTTTCAGTTGCTGTGAAAAGG...CCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560829.5
CDS-3UTR TCA 90 bp TGGGGAAAGAATGTCTTGCAGGGGTCAGAGAAGCTCCAATGCTTACCAGGTCAGAACAGGGGTTCACTGTaGAGAGAGCTGAGGGACCAA +
Preference number: 4 (lower is better)
Translates to: WGKNVLQGSEKLQCLPGQNRGSL*RELRDQ
Trigger: TTGGTCCCTCAGCTCTCTTCACAGTGAACCCCTGTT...CTGACCTGGTAAGCATTGGAGCTTCTCTGACCCCTGCAAGACATTCTTTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR GCA 90 bp ACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCTCCACTGTGGCATCTaGAAAGAGATCCTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: TGPSPGAASVYRESECLLLHCGI*KEILWL
Trigger: GAGCCACAGGATCTCTTTGCAGATGCCACAGTGGAG...CAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261889.9
ENST00000559844.6
CDS-3UTR GCA 90 bp TGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGTCGTGGGGAGCCTCCCGCTTCTTCTaGAGTGTGGCTTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: WKLNEITVRVTGDSWSWGASRFF*SVAWAS
Trigger: GGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGC...TCCCCACGACCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR GCA 90 bp TCAGGAGCTCTTGGATCACCCTATCTAGAGGCAGAGGGCATGGCTTTCATGTCTATCTCGTCCTTGGCCTaGTGCAGCTTATCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SGALGSPYLEAEGMAFMSISSLA*CSLSGL
Trigger: CAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGAT...AGACATGAAAGCCATGCCCTCTGCCTCTAGATAGGGTGATCCAAGAGCTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TGTTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGGACCTGATTCCCAACTaGTCCCCAGCCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CSCPFISDQARPCPNMEQDLIPN*SPACCC
Trigger: ACAGCAGCAGGCTGGGGAGCAGTTGGGAATCAGGTC...CTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560861.1
CDS-3UTR CCA 90 bp GCCCTGCCTCATATGCTAGCTGTCCCCAGGGTGCTGGCGGTGGCTTCTCAGCAAGGATGTAGTTATCTTTaGAGACTGATGTTTACTGAC +
Preference number: 4 (lower is better)
Translates to: ALPHMLAVPRVLAVASQQGCSYL*RLMFTD
Trigger: GTCAGTAAACATCAGTCTCCAAAGATAACTACATCC...TTGCTGAGAAGCCACCGCCAGCACCCTGGGGACAGCTAGCATATGAGGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR CCA 90 bp AAAAGACACGCCCTCCATCACCACACACTCTCCAGCCACATCTTGGCCCCATCCTGCAAAGAGATCCTGTaGCTCTTGGTCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: KRHALHHHTLSSHILAPSCKEIL*LLVLFF
Trigger: GAAGAACAAGACCAAGAGCCACAGGATCTCTTTGCA...GGATGGGGCCAAGATGTGGCTGGAGAGTGTGTGGTGATGGAGGGCGTGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp ATCCAGGCATGTGCGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGAGACTCTTTGCAAACTaGGCTGTGTTCAGCGCTAGC +
Preference number: 4 (lower is better)
Translates to: IQACAHCSTDVSSYVWSQRLFAN*AVFSAS
Trigger: GCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCT...CTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCGCACATGCCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CACCACTCAATGTCTGGGTACCCACGGCACGTGGCAGCTACAAGACCAAGAAGGTTGTTGGCCTGTTCCTaGTGGAGCTGCTCAATTTTT +
Preference number: 4 (lower is better)
Translates to: HHSMSGYPRHVAATRPRRLLACS*WSCSIF
Trigger: AAAAATTGAGCAGCTCCACCAGGAACAGGCCAACAA...CCTTCTTGGTCTTGTAGCTGCCACGTGCCGTGGGTACCCAGACATTGAGTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CCA 90 bp GATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGAGGATCTCGTCCTTaGCCTGCTGCAGCTTATCAG +
Preference number: 4 (lower is better)
Translates to: DASLGVHQGGGGQCIKRQRGSRP*PAAAYQ
Trigger: CTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCG...CTGCCTTTTTATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp CAGGCATGTGCGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGACTATATTCCCCAGGCTaGTCTCAAATTCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: QACAHCSTDVSSYVWSQGLYSPG*SQILGL
Trigger: GAGCCCAAGAATTTGAGACCAGCCTGGGGAATATAG...TCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCGCACATGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TCCTCATCTTCAGCACTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAAGCCTGAACCTTTGCTaGGGCCCATGGAGTTATAAA +
Preference number: 4 (lower is better)
Translates to: SSSSALRSPNAELAKGKASLNLC*GPWSYK
Trigger: TTTATAACTCCATGGGCCCCAGCAAAGGTTCAGGCT...TGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGAAGATGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GGTCCATCAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGACAATGAAGCCATTCTaGGAGTGCTTCTCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: GPSRWRRTVYKKAASHRWTMKPF*ECFSES
Trigger: GCTTTCCGAGAAGCACTCTCAGAATGGCTTCATTGT...CCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTGATGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGGCTCTTGCTGGCAGGCTGCTCTTTCCTATGGTTaGCTAGAGTTTCTACAACAG +
Preference number: 4 (lower is better)
Translates to: CEHPLAVCATPEGSCWQAALSYG*LEFLQQ
Trigger: CTGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGC...AGCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCAGACCTTCCTGGGAGAGTGCCCGTaGCAATGCCGTGTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GHGFHVYGDKASSHYQTFLGECP*QCRVVL
Trigger: GAGGACAACACGGCATTGTCACGGGCACTCTCCCAG...GAAGGTCTGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp ACATTTGCAATCAGTTTCCATGAGGTGTCGGCGCTGTTGGGAAGGACTGGGAGAAAGTCCCTTTCATATTaGGTCACCCGAGACTCCCAC +
Preference number: 4 (lower is better)
Translates to: TFAISFHEVSALLGRTGRKSLSY*VTRDSH
Trigger: GTGGGAGTCTCGGGTGACTCAATATGAAAGGGACTT...TCTCCCAGTCCTTCCCAACAGCGCCGACACCTCATGGAAACTGATTGCAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATATTTTCGGACCACTGTTaGAATCCTCTCGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: PRQDASLGVHQGGGGQCIFSDHC*NPLEVP
Trigger: AGGGACTTCGAGAGGATTTCAACAGTGGTCCGAAAA...TATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR TCA 90 bp GTACAGGGAATCAGAATGTTTACTGCGTTTTCTTGTCTCAGGTTGCCTCGCCCCCTCAGAACAGGTAGCTaGGGTAGGCGGAGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: VQGIRMFTAFSCLRLPRPLRTGS*GRRRER
Trigger: TCTTTCTCTCCGCCTACCTCAGCTACCTGTTCTGAG...GGGGCGAGGCAACCTGAGACAAGAAAACGCAGTAAACATTCTGATTCCCTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTTGATGGGTGTGTGTGCAACTCCTaGGGGCTCTTGCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: HYQTFTPSHSLLRMCFDGCVCNS*GLLLAG
Trigger: GCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACA...CCCATCAAAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GGTGGAGACTGTAAATCACCCAACTTTATCACAAGATGCAGTTATCGGCAGGTGCCCACCAAAGAGAACTaGTACAGCAGGACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GGDCKSPNFITRCSYRQVPTKEN*YSRTWG
Trigger: GCCCCAGGTCCTGCTGTATCAGTTCTCTTTGGTGGG...CACCTGCCGATAACTGCATCTTGTGATAAAGTTGGGTGATTTACAGTCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGAATGGCTTGCAACTCTaGGTAAAACAGGAATCCCTG +
Preference number: 4 (lower is better)
Translates to: QGGGGQCIKRQRHTGGLWNGLQL*VKQESL
Trigger: CAGGGATTCCTGTTTTACTCAGAGTTGCAAGCCATT...CCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GTTGTTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCATTCTTGGGCTCAAGTaGTTCTCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: VVLVHLSQIRHDPVQTWSILGLK*FSHLGL
Trigger: GAGGCCGAGGTGGGAGAATCACTTGAGCCCAAGAAT...GCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp CACCTGTTAAAAAGAAATACTTGCACCACTGGCCCTTCCCCTGGTGCTGCATCTAGTTTCCGTAAGCGCTaGTCCTCACACTCTACCTCC +
Preference number: 4 (lower is better)
Translates to: HLLKRNTCTTGPSPGAASSFRKR*SSHSTS
Trigger: GGAGGTAGAGTGTGAGGAGCAGCGCTTACGGAAACT...AGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAGTATTTCTTTTTAACAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp CTATTGCCTCATGTGTTACAAAGGGTTTCATTGTCTGCCCAGTGTCTGGGCCAGAGTTTCCGTAAGCGCTaGTCCTCACACTCTACCTCC +
Preference number: 4 (lower is better)
Translates to: LLPHVLQRVSLSAQCLGQSFRKR*SSHSTS
Trigger: GGAGGTAGAGTGTGAGGAGCAGCGCTTACGGAAACT...CTGGCCCAGACACTGGGCAGACAATGAAACCCTTTGTAACACATGAGGCAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp AGGCAGAGGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCAGCCTCCCGCTTCTTCTaGAGTGTGGCTTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: RQRAWLSCLWRQSIKSLSASRFF*SVAWAS
Trigger: GGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGC...TGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCCTCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp GATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGATCTCGTCCTTGGCCTaGTGCAGCTTATCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: DASLGVHQGGGGQCIKRQISSLA*CSLSGL
Trigger: CAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGAT...CTGCCTTTTTATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR GCA 90 bp TTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGCCCTTCCCCTGGTGCTaGATCTGTGTACAGGGAATC +
Preference number: 4 (lower is better)
Translates to: FLSIYLRSGTTLSKHGAEPFPWC*ICVQGI
Trigger: GATTCCCTGTACACAGATGCAGCACCAGGGGAAGGG...CTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TTGTTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCATGGCCCTTCCCCTGGTaGTGCATCTGTGTACAGGGA +
Preference number: 4 (lower is better)
Translates to: LFLSIYLRSGTTLSKHGAWPFPW*CICVQG
Trigger: TCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCA...TGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp CGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATAAGGGTTTCATTGTCTaGCCAGTGTCTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: RTVAQMCPPMFGARDPHYKGFIV*PVSGPE
Trigger: TTCTGGCCCAGACACTGGGCAGACAATGAAACCCTT...ATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp CCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATACTGCCCCAAACCTATTaGCTCATGTGTTACAAAGGG +
Preference number: 4 (lower is better)
Translates to: PRQDASLGVHQGGGGQCILPQTY*LMCYKG
Trigger: CCCTTTGTAACACATGAGGCAATAGGTTTGGGGCAG...TATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TGGCCTCCCCTGGCTAGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTGGAAGAGTTAACAGTTaGTGGTATTTTTGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: WPPLARPAEICVNTLWLCGRVNS*WYFCVG
Trigger: GCCTACACAAAAATACCAGCAACTGTTAACTCTTCC...ACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCTAGCCAGGGGAGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp CACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTTCGGCAGGTGACACATaGACCAGAAGACAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: HCSTDVSSYVWSQGSPLSSAGDT*TRRQAS
Trigger: TGAAGCCTGTCTTCTGGTGCATGTGTCACCTGCCGA...AGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TATGAGGCTCTTCTCCGGGGGCGGAGGGACAATGAAGCCATTCTGAGAGTGCTTAATGGTAAGCTTGTCTaGAAAGAGATCCTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: YEALLRGRRDNEAILRVLNGKLV*KEILWL
Trigger: GAGCCACAGGATCTCTTTGCAGACAAGCTTACCATT...AAGCACTCTCAGAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR GCA 90 bp CTGCCCATCTGGGGAAAGAATGTCTTGCAGGGGTCAGAGAAGCTCCAATGCTTATCAGAGAAGCTCCAATaGTTACCAGGTCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LPIWGKNVLQGSEKLQCLSEKLQ*LPGQVG
Trigger: ACCCACCTGACCTGGTAAGCATTGGAGCTTCTCTGA...TAAGCATTGGAGCTTCTCTGACCCCTGCAAGACATTCTTTCCCCAGATGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR CCA 90 bp CAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGTTGTTGGCCTGTTCCTaGTGGAGCTGCTCAATTTTT +
Preference number: 4 (lower is better)
Translates to: QGGGGQCIKRQRHTGGLWLLACS*WSCSIF
Trigger: AAAAATTGAGCAGCTCCACCAGGAACAGGCCAACAA...CCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp TTACACCTTTTAGACTCAGTTCAAGCATCAGGTTCTCCACAAAGTCCTCCCTCCAGGCAGCGCGGACTATaGCCAGGAGGCGAATGTAGT +
Preference number: 4 (lower is better)
Translates to: LHLLDSVQASGSPQSPPSRQRGL*PGGECS
Trigger: ACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCT...GGAGGGAGGACTTTGTGGAGAACCTGATGCTTGAACTGAGTCTAAAAGGTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTTGATGGGTTCTGCAGTGTGGCTTaGGCATCCTGCCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: HYQTFTPSHSLLRMCFDGFCSVA*ASCQRC
Trigger: GCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAA...CCCATCAAAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGGCTCTTGCTGGCAGGCTGGTACAGTCACCCTATaGATGCCTTCAAATTACACA +
Preference number: 4 (lower is better)
Translates to: CEHPLAVCATPEGSCWQAGTVTL*MPSNYT
Trigger: TGTGTAATTTGAAGGCATCCATAGGGTGACTGTACC...AGCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGCAAGGTACAGTCACCCTATaGATGCCTTCAAATTACACA +
Preference number: 4 (lower is better)
Translates to: LDVLEVYGLPVGPECARQGTVTL*MPSNYT
Trigger: TGTGTAATTTGAAGGCATCCATAGGGTGACTGTACC...TTGCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TCAGGAGCTCTTGGATCACCCTATCTAGAGGCAGAGGGCATGGCTTTCATGTCTAAAATTAGCTGGGTGTaGGGGCAGGCACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: SGALGSPYLEAEGMAFMSKISWV*GQAPVI
Trigger: GATTACAGGTGCCTGCCCCCACACCCAGCTAATTTT...AGACATGAAAGCCATGCCCTCTGCCTCTAGATAGGGTGATCCAAGAGCTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CAAAGGAGCTTCAAAGCCCACTCTGACCAGTATAGCTTGAGCAGCTGTGGACACAAAATTAGCTGGGTGTaGGGGCAGGCACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: QRSFKAHSDQYSLSSCGHKISWV*GQAPVI
Trigger: GATTACAGGTGCCTGCCCCCACACCCAGCTAATTTT...GTGTCCACAGCTGCTCAAGCTATACTGGTCAGAGTGGGCTTTGAAGCTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TCAGCACTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAGGTTCCATACTAAATAACATTCTCTaGCTGGGTATGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SALRSPNAELAKGKAGSILNNIL*LGMVAH
Trigger: GTGAGCCACCATACCCAGCCAGAGAATGTTATTTAG...TATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGAACAAGCAGCACATTTaGCACCCAGATCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: QGGGGQCIKRQRHTGGLWNKQHI*HPDLGF
Trigger: GAAACCAAGATCTGGGTGCCAAATGTGCTGCTTGTT...CCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGCAAAAAGAGTTAACAACATaGAAAAGGGGGCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: LDVLEVYGLPVGPECARQKELTT*KRGQTG
Trigger: TCCAGTCTGCCCCCTTTTCCATGTTGTTAACTCTTT...TTGCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTTCTCCCTTGTAGAGGCTTCTaGCTCAGTACCCCTAACCCA +
Preference number: 4 (lower is better)
Translates to: VAQMCPPMFGARDPHYLLPCRGF*LSTPNP
Trigger: TGGGTTAGGGGTACTGAGCCAGAAGCCTCTACAAGG...GAGAAGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GGTAATGTGGAAAGCGCCTCCCAGGTCCTATCAGACACCCATGTGATGTGGCTCCTGGTCTCAAATTCTTaGGCTCAAGTGATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: GNVESASQVLSDTHVMWLLVSNS*AQVILP
Trigger: TGGGAGAATCACTTGAGCCCAAGAATTTGAGACCAG...GAGCCACATCACATGGGTGTCTGATAGGACCTGGGAGGCGCTTTCCACATTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAACTGACACTGAATACTaGGATCACACCAGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: PRQDASLGVHQGGGGQCITDTEY*DHTSSK
Trigger: CTTCGAGCTGGTGTGATCCCAGTATTCAGTGTCAGT...TATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGCAAAAGACACGCCAGAGTTAACAGTTGCTaGTATTTTTGTGTAGGCGAC +
Preference number: 4 (lower is better)
Translates to: LKSMGFPWALSVLGKRHARVNSC*YFCVGD
Trigger: GTCGCCTACACAAAAATACCAGCAACTGTTAACTCT...GGCGTGTCTTTTGCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CCA 90 bp GGGCTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGTCATCTTCAAGGATTTaGTTTCTAGAAGTGCCTATG +
Preference number: 4 (lower is better)
Translates to: GLDVLEVYGLPVGPECARSSSRI*FLEVPM
Trigger: CATAGGCACTTCTAGAAACCAAATCCTTGAAGATGA...CCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GAAGCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGACCCAGAAAGTCGGGTGGGATGGGCCCTaGGTTCATTTGGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: EAILRVLLGKLLIKTQKVGWDGP*VHLEPA
Trigger: TGCTGGTTCCAAATGAACCCAGGGCCCATCCCACCC...GACTTTCTGGGTCTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
3UTR CAA 72 bp CTGTGTACAGGGAATCAGAATGTTTACTGCGTTTTCTaGTCTCAGGTTGCCTCGCCCCAAACCTTAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LCTGNQNVYCVF*SQVASPQTLAP
Trigger: GGGGGCTAAGGTTTGGGGCGAGGCAACCTGAGACAAGAAAACGCAGTAAACATTCTGATTCCCTGTACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
3UTR CAA 72 bp CGGCAGGTGACACATGCACCAGAAGACAGGCTTCAGTaGTTCTTGTCCATTTATCTCAGATCAGGCACGACC +
Preference number: 4 (lower is better)
Translates to: RQVTHAPEDRLQ*FLSIYLRSGTT
Trigger: GGTCGTGCCTGATCTGAGATAAATGGACAAGAACAACTGAAGCCTGTCTTCTGGTGCATGTGTCACCTGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TCACACCAGCTCGAAGTCCAGTCCTCATCTTCAGCACTCCGGAGCCCAAACGCTACTGTCAAATCAAATTaGTCCTCCTGTTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SHQLEVQSSSSALRSPNATVKSN*SSCSSS
Trigger: GGAAGAAGAACAGGAGGATCAATTTGATTTGACAGT...AGCGTTTGGGCTCCGGAGTGCTGAAGATGAGGACTGGACTTCGAGCTGGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CGTGGCAGCTACAAGACCAAGAAGGCAGGGATGGCAAGTTATCTGCTGCCCCTCCAAACTGTTTGCTTCTaGACAATGGTAAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: RGSYKTKKAGMASYLLPLQTVCF*TMVSLS
Trigger: AGACAAGCTTACCATTGTTCAGAAGCAAACAGTTTG...GAGGGGCAGCAGATAACTTGCCATCCCTGCCTTCTTGGTCTTGTAGCTGCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR TCA 90 bp TGGCCTCCCCTGGCTAGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTCTCAAACCAAATGTCTaGTTCATTCATCTTGATGGT +
Preference number: 4 (lower is better)
Translates to: WPPLARPAEICVNTLWLCLKPNV*FIHLDG
Trigger: ACCATCAAGATGAATGAATCAGACATTTGGTTTGAG...ACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCTAGCCAGGGGAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CAGGCATGTGCGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGAGCTCTTTCCTATGGTTaGCTAGAGTTTCTACAACAG +
Preference number: 4 (lower is better)
Translates to: QACAHCSTDVSSYVWSQGALSYG*LEFLQQ
Trigger: CTGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGC...TCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCGCACATGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CCAAAGTTGATGGTAAGGATACTGAGGGGTAGGGAGAGTGACTTTTTCCAAAAACTGGGAGAGTGCCCGTaGCAATGCCGTGTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PKLMVRILRGRESDFFQKLGECP*QCRVVL
Trigger: GAGGACAACACGGCATTGTCACGGGCACTCTCCCAG...TTTTTGGAAAAAGTCACTCTCCCTACCCCTCAGTATCCTTACCATCAACTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGGGTGCAGCACAAAACTTGTaGACGGTAGAGAAAAACTTA +
Preference number: 4 (lower is better)
Translates to: GGGGQCIKRQRHTGGLWGAAQNL*TVEKNL
Trigger: TAAGTTTTTCTCTACCGTTCACAAGTTTTGTGCTGC...ACCCCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGGCTCTTGCTGGCAGGCTAAAACAAACAACCCCTaGCCAAGAATCCAACAACAA +
Preference number: 4 (lower is better)
Translates to: CEHPLAVCATPEGSCWQAKTNNP*PRIQQQ
Trigger: TTGTTGTTGGATTCTTGGTCAGGGGTTGTTTGTTTT...AGCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGACCCAGAAAGTCACTCTCCATGGGCCTCACTaGCTTTACCCTACACCAAGC +
Preference number: 4 (lower is better)
Translates to: AILRVLLGKLLIKTQKVTLHGPH*LYPTPS
Trigger: GCTTGGTGTAGGGTAAAGTCAGTGAGGCCCATGGAG...AGTGACTTTCTGGGTCTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR TCA 90 bp TCTTCCTTTGTGCTCCTGTTATTCCTTGTAGAGGCTTCTGGCTCAGTACCCCTAGCAGTTATCGGCAGGTaGCACATGCACCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: SSFVLLLFLVEASGSVPLAVIGR*HMHQKT
Trigger: TGTCTTCTGGTGCATGTGTCACCTGCCGATAACTGC...TAGGGGTACTGAGCCAGAAGCCTCTACAAGGAATAACAGGAGCACAAAGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGACCCAGAAAGTCACTCTTTCACAGACAGTATaGACGCCAGGTGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: AILRVLLGKLLIKTQKVTLSQTV*TPGGRA
Trigger: GGCTCTGCCACCTGGCGTTCATACTGTCTGTGAAAG...AGTGACTTTCTGGGTCTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR GCA 90 bp TGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGGCTCTTGCTGGCAGGCTTCTGATTATTTTGTGTaGTGTCCAAGGATAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CEHPLAVCATPEGSCWQASDYFV*CPRIAP
Trigger: TGGAGCTATCCTTGGACAGCACACAAAATAATCAGA...AGCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261889.9
ENST00000559844.6
CDS-3UTR GCA 90 bp TATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTGCTGCCATGTCTTCATaGGCTGGTCGAAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: YQYSTPSHNSTTYCRSFAAAMSS*AGRRQR
Trigger: GCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGC...AGCAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR GCA 90 bp TCTTCCTTTGTGCTCCTGTTATTCCTTGTAGAGGCTTCTGGCTCAGTACCCCTATCGTCCTTGGCCTGCTaGAGCTTATCAGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SSFVLLLFLVEASGSVPLSSLAC*SLSGLL
Trigger: CAACAAGCCTGATAAGCTGCAGCAGGCCAAGGACGA...TAGGGGTACTGAGCCAGAAGCCTCTACAAGGAATAACAGGAGCACAAAGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp ACTAGAGTTTCTACAACAGCATGCAGTTTCCGTAAGCGCTGCTCCTCACACTCTATCTCGTCCTTGGCCTaGTGCAGCTTATCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: TRVSTTACSFRKRCSSHSISSLA*CSLSGL
Trigger: CAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGAT...AGAGTGTGAGGAGCAGCGCTTACGGAAACTGCATGCTGTTGTAGAAACTCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR GCA 90 bp TCACACCAGCTCGAAGTCCAGTCCTCATCTTCAGCACTCCGGAGCCCAAACGCTAGTCTCTGCCTCCTTTaGAGGAGAATAGGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: SHQLEVQSSSSALRSPNASLCLL*RRIGFN
Trigger: ATTAAAACCTATTCTCCTGCAAAGGAGGCAGAGACT...AGCGTTTGGGCTCCGGAGTGCTGAAGATGAGGACTGGACTTCGAGCTGGTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp ATGGCTAGACTCTTTGCAAACTGGGCTGTGTTCAGCGCTAGCTCTTTCCTATGGTTAGGAGATGGCCTTTaGCTCAGGAAGGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: MARLFANWAVFSASSFLWLGDGL*LRKEGF
Trigger: GAAGCCTTCCTTCCTGAGGCAAAGGCCATCTCCTAA...CCATAGGAAAGAGCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCTAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR GCA 90 bp GTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTTCTCTTAGGAGATGGCCTTTaGCTCAGGAAGGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: VAQMCPPMFGARDPHYLLLGDGL*LRKEGF
Trigger: GAAGCCTTCCTTCCTGAGGCAAAGGCCATCTCCTAA...GAGAAGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp AGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAAAATTAGGAGATGGCCTTTaGCTCAGGAAGGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RQDASLGVHQGGGGQCIKLGDGL*LRKEGF
Trigger: GAAGCCTTCCTTCCTGAGGCAAAGGCCATCTCCTAA...TTTTATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR GCA 90 bp GTCCAGCCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGCTTGATTTCCACACGTaGAAGCTCTTTACAAAAATG +
Preference number: 4 (lower is better)
Translates to: VQPRQDASLGVHQGGGGQLDFHT*KLFTKM
Trigger: CATTTTTGTAAAGAGCTTGCACGTGTGGAAATCAAG...CTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGGCTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp GACAATGAAGCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGACCCAGGCTTCCCCTCCCATCTaGCCCAAACCTATTGCCTCA +
Preference number: 4 (lower is better)
Translates to: DNEAILRVLLGKLLIKTQASPPI*PKPIAS
Trigger: TGAGGCAATAGGTTTGGGGCAGATGGGAGGGGAAGC...CTGGGTCTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGCTTCATTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR GCA 90 bp TATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTACCTTCAGCACTCACTaGCCCCACCACTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: YQYSTPSHNSTTYCRSFATFSTH*PHHCFP
Trigger: GGGGAAGCAGTGGTGGGGGCAGTGAGTGCTGAAGGT...AGCAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp CTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCGGCAGGTGACACATaGACCAGAAGACAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LVHLSQIRHDPVQTWSRESAGDT*TRRQAS
Trigger: TGAAGCCTGTCTTCTGGTGCATGTGTCACCTGCCGA...TTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCGGAAGGGAGAAAGGGTaGTTAAGGTACCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: CPFISDQARPCPNMEQRIGREKG*LRYQAQ
Trigger: CTGGGCTTGGTACCTTAAGCACCCTTTCTCCCTTCC...GATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp CCCATCTGGGGAAAGAATGTCTTGCAGGGGTCAGAGAAGCTCCAATGCTTACCAGCTACTCACCAAAGATaGTTCTGTCTTCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PIWGKNVLQGSEKLQCLPATHQR*FCLPAS
Trigger: AGAGGCTGGAAGACAGAAGCATCTTTGGTGAGTAGC...TGGTAAGCATTGGAGCTTCTCTGACCCCTGCAAGACATTCTTTCCCCAGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR CCA 90 bp CCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATATGCAAAGAGATCCTGTaGCTCTTGGTCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PRQDASLGVHQGGGGQCICKEIL*LLVLFF
Trigger: GAAGAACAAGACCAAGAGCCACAGGATCTCTTTGCA...TATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp ACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGAGGATAGCTCCACTGTaGCATCTGCAAAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: TGPSPGAASVYRESECLLRIAPL*HLQRDP
Trigger: AGGATCTCTTTGCAGATGCCACAGTGGAGCTATCCT...CAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261889.9
ENST00000559844.6
CDS-3UTR CCA 90 bp GGGTCAGAGAAGCTCCAATGCTTACCAGGTCAGGTGGGTATCCAAATGGGACTTAGGATAGCTCCACTGTaGCATCTGCAAAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: GSEKLQCLPGQVGIQMGLRIAPL*HLQRDP
Trigger: AGGATCTCTTTGCAGATGCCACAGTGGAGCTATCCT...AAGTCCCATTTGGATACCCACCTGACCTGGTAAGCATTGGAGCTTCTCTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR CCA 90 bp ACATTTGCAATCAGTTTCCATGAGGTGTCGGCGCTGTTGGGAAGGACTGGGAGAGCTTCGAAGAATTTGTaGCTTCCTGAGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: TFAISFHEVSALLGRTGRASKNL*LPEEEE
Trigger: CTCTTCCTCCTCAGGAAGCCACAAATTCTTCGAAGC...TCTCCCAGTCCTTCCCAACAGCGCCGACACCTCATGGAAACTGATTGCAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559844.6
CDS-3UTR CCA 90 bp GGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGGGTGCTAGCTCTTTCCTATaGTTGACTAGAGTTTCTACA +
Preference number: 4 (lower is better)
Translates to: GGGGQCIKRQRHTGGLWGASSFL*LTRVST
Trigger: TGTAGAAACTCTAGTCAACCATAGGAAAGAGCTAGC...ACCCCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp GTGTTGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTTGCAAACTGGGCTGTGTTGTTGGCCTGTTCCTaGTGGAGCTGCTCAATTTTT +
Preference number: 4 (lower is better)
Translates to: VLSSELPSMARLFANWAVLLACS*WSCSIF
Trigger: AAAAATTGAGCAGCTCCACCAGGAACAGGCCAACAA...CACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CCA 90 bp TTCAGCGCTAGCTCTTTCCTATGGTTGACTAGAGTTTCTACAACAGCATGCAGTAGGCAGCGCGGACTATaGCCAGGAGGCGAATGTAGT +
Preference number: 4 (lower is better)
Translates to: FSASSFLWLTRVSTTACSRQRGL*PGGECS
Trigger: ACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCT...ACTGCATGCTGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGCTAGCGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CCA 90 bp TATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTTTCTGCAGTGTGGCTTaGGCATCCTGCCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: YQYSTPSHNSTTYCRSFAFCSVA*ASCQRC
Trigger: GCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAA...AGCAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp CCAAACATGGAGCAGAGAATCTTAGCCAGTGTCTCCAAAGACAGAGTGTACATCCGAGGATCTCGTCCTTaGCCTGCTGCAGCTTATCAG +
Preference number: 4 (lower is better)
Translates to: PNMEQRILASVSKDRVYIRGSRP*PAAAYQ
Trigger: CTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCG...GATGTACACTCTGTCTTTGGAGACACTGGCTAAGATTCTCTGCTCCATGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGGAGACAAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTTTGGGATGGAGGGGCTaGAGGTGGCAAGGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: WRQSIKSLSDLHTFTQSTLGWRG*RWQGSH
Trigger: ATGGGAGCCTTGCCACCTCCAGCCCCTCCATCCCAA...AGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTTGTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGGACCTGGGGCCCCAGTaGCAGGAGCGTCTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: YINTPPHPIIPPPIVGLLDLGPQ*QERLWD
Trigger: ATCCCAAAGACGCTCCTGCCACTGGGGCCCCAGGTC...CAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TTCAGCGCTAGCTCTTTCCTATGGTTGACTAGAGTTTCTACAACAGCATGCAGTCACACAGGTGGGCTCTaGGGTCCTTGGTCCATTAGG +
Preference number: 4 (lower is better)
Translates to: FSASSFLWLTRVSTTACSHTGGL*GPWSIR
Trigger: CCTAATGGACCAAGGACCCCAGAGCCCACCTGTGTG...ACTGCATGCTGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGCTAGCGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp AGGCAGAGGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCACACACAGGTGGGCTCTaGGGTCCTTGGTCCATTAGG +
Preference number: 4 (lower is better)
Translates to: RQRAWLSCLWRQSIKSLSHTGGL*GPWSIR
Trigger: CCTAATGGACCAAGGACCCCAGAGCCCACCTGTGTG...TGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCCTCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AGGAGCTTCAAAGCCCACTCTGACCAGTATAGCTTGAGCAGCTGTGGACACAGCCTAAATAACATTCTCTaGCTGGGTATGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: RSFKAHSDQYSLSSCGHSLNNIL*LGMVAH
Trigger: GTGAGCCACCATACCCAGCCAGAGAATGTTATTTAG...GCTGTGTCCACAGCTGCTCAAGCTATACTGGTCAGAGTGGGCTTTGAAGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TTTATCACAAGATGCAGTTATCGGCAGGTGACACATGCACCAGAAGACAGGCTTGCGACAATGGTAATGTaGAAAGCGCCTCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: FITRCSYRQVTHAPEDRLATMVM*KAPPRS
Trigger: GGACCTGGGAGGCGCTTTCCACATTACCATTGTCGC...AAGCCTGTCTTCTGGTGCATGTGTCACCTGCCGATAACTGCATCTTGTGATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGTTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGTCTCCAGCCACATCTTaGCCCCATCCTGAGATTTCC +
Preference number: 4 (lower is better)
Translates to: CSCPFISDQARPCPNMEQSPATS*PHPEIS
Trigger: GGAAATCTCAGGATGGGGCCAAGATGTGGCTGGAGA...CTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CCA 90 bp GGGGTCAGAGAAGCTCCAATGCTTACCAGGTCAGGTGGGTATCCAAATGGGACTTGGCTTCTCAGCAAGTaGAGTTTTTCATGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GVREAPMLTRSGGYPNGTWLLSK*SFSCLP
Trigger: TGGCAGACATGAAAAACTCCACTTGCTGAGAAGCCA...AGTCCCATTTGGATACCCACCTGACCTGGTAAGCATTGGAGCTTCTCTGACCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558040.5
3UTR CAA 72 bp ATTTTGCTGACGGCATCTGTGGCTTTGTTGAACATCTaGAGGAGACCAGCACCACTCAATGTCTGGGTACCC +
Preference number: 4 (lower is better)
Translates to: ILLTASVALLNI*RRPAPLNVWVP
Trigger: GGGTACCCAGACATTGAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGCCACAGATGCCGTCAGCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR TCA 90 bp TATGAGGCTCTTCTCCGGGGGCGGAGGGACAATGAAGCCATTCTGAGAGTGCTTACTGTCAAATCAAATTaGTCCTCCTGTTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: YEALLRGRRDNEAILRVLTVKSN*SSCSSS
Trigger: GGAAGAAGAACAGGAGGATCAATTTGATTTGACAGT...AAGCACTCTCAGAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559389.1
CDS-3UTR TCA 90 bp AGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAAAAACAATGAAGCCATTCTaGGAGTGCTTCTCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: RQDASLGVHQGGGGQCIKTMKPF*ECFSES
Trigger: GCTTTCCGAGAAGCACTCTCAGAATGGCTTCATTGT...TTTTATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TGCATTCATACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCGGGGCGGAGGGACAATaGAGCCATTCTGAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: CIHTIPYLLRISYTDCQIGAEGQ*SHSESA
Trigger: AGCACTCTCAGAATGGCTTCATTGTCCCTCCGCCCC...GATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTATGAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559389.1
CDS-3UTR TCA 90 bp GTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTTCTCTTTCCAAGAACTCTCTaGCGTCAGGGTCCTGTAACA +
Preference number: 4 (lower is better)
Translates to: VAQMCPPMFGARDPHYLLFPRTL*RQGPVT
Trigger: TGTTACAGGACCCTGACGTCAGAGAGTTCTTGGAAA...GAGAAGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTTTTTCGGACCACTGTTaGAATCCTCTCGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: HCSTDVSSYVWSQGSPLSFSDHC*NPLEVP
Trigger: AGGGACTTCGAGAGGATTTCAACAGTGGTCCGAAAA...AGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR TCA 90 bp TCCTCATCTTCAGCACTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAACTGAGGATGTGTTTTaGTGGGTGACAAAAATAGGT +
Preference number: 4 (lower is better)
Translates to: SSSSALRSPNAELAKGKATEDVF*WVTKIG
Trigger: ACCTATTTTTGTCACCCATCAAAACACATCCTCAGT...TGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGAAGATGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGGCTCTTGCTGGCAGGCTTCCAACAACAAGGGATaGATCAAAATTATGGTACAG +
Preference number: 4 (lower is better)
Translates to: CEHPLAVCATPEGSCWQASNNKG*IKIMVQ
Trigger: CTGTACCATAATTTTGATTCATCCCTTGTTGTTGGA...AGCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCTTAATCTTGGCCCCATCCTaGGATTTCCAGGAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PFISDQARPCPNMEQRILILAPS*DFQEFL
Trigger: GAGGAACTCCTGGAAATCTCAGGATGGGGCCAAGAT...TAAGATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR GCA 90 bp CACCTGTTAAAAAGAAATACTTGCACCACTGGCCCTTCCCCTGGTGCTGCATCTGTTTCTACAACAGCATaGAGTTTCCGTAAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: HLLKRNTCTTGPSPGAASVSTTA*SFRKRC
Trigger: GCAGCGCTTACGGAAACTGCATGCTGTTGTAGAAAC...AGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAGTATTTCTTTTTAACAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp CATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTTGATGGGGCAACTGTAGCTCACTaGAACCTCAACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HYQTFTPSHSLLRMCFDGATVAH*NLNLLG
Trigger: GCCCAGGAGGTTGAGGTTGCAGTGAGCTACAGTTGC...CCCATCAAAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp CCAAACATGGAGCAGAGAATCTTAGCCAGTGTCTCCAAAGACAGAGTGTACATCCCAGGTGGCAGAGCCTaGAACTGGGGAACAATCATT +
Preference number: 4 (lower is better)
Translates to: PNMEQRILASVSKDRVYIPGGRA*NWGTII
Trigger: AATGATTGTTCCCCAGTTGCAGGCTCTGCCACCTGG...GATGTACACTCTGTCTTTGGAGACACTGGCTAAGATTCTCTGCTCCATGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTGCCCATCTGGGGAAAGAATGTCTTGCAGGGGTCAGAGAAGCTCCAATGCTTAAGATCCTGTGGCTCTTaGTCTTGTTCTTCATGGATC +
Preference number: 4 (lower is better)
Translates to: LPIWGKNVLQGSEKLQCLRSCGS*SCSSWI
Trigger: GATCCATGAAGAACAAGACCAAGAGCCACAGGATCT...TAAGCATTGGAGCTTCTCTGACCCCTGCAAGACATTCTTTCCCCAGATGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR CCA 90 bp CCCATCTGGGGAAAGAATGTCTTGCAGGGGTCAGAGAAGCTCCAATGCTTACCATGCAAAGAGATCCTGTaGCTCTTGGTCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PIWGKNVLQGSEKLQCLPCKEIL*LLVLFF
Trigger: GAAGAACAAGACCAAGAGCCACAGGATCTCTTTGCA...TGGTAAGCATTGGAGCTTCTCTGACCCCTGCAAGACATTCTTTCCCCAGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR CCA 90 bp TGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTTGCAAACTGGGCTGTGTTCATGCAAAGAGATCCTGTaGCTCTTGGTCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: CPQSSQAWLDSLQTGLCSCKEIL*LLVLFF
Trigger: GAAGAACAAGACCAAGAGCCACAGGATCTCTTTGCA...TGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CCA 90 bp TGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGTCGTGGGGAGGTACCCACGGCACGTaGCAGCTCTTCTTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: WKLNEITVRVTGDSWSWGGTHGT*QLFFFQ
Trigger: TTGGAAAAAGAAGAGCTGCCACGTGCCGTGGGTACC...TCCCCACGACCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp GATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCAGAGCTCCCAAGCATaGCTAGACTCTTTGCAAACT +
Preference number: 4 (lower is better)
Translates to: DASLGVHQGGGGQCIKRQQSSQA*LDSLQT
Trigger: AGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTG...CTGCCTTTTTATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp ACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTTGGAAGAAGTCATTGTTaGCCTGTTCCTGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: TVAQMCPPMFGARDPHYLGRSHC*PVPGGA
Trigger: AGCTCCACCAGGAACAGGCCAACAATGACTTCTTCC...AAGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGGAGACAAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTAGGCAGCGCGGACTATaGCCAGGAGGCGAATGTAGT +
Preference number: 4 (lower is better)
Translates to: WRQSIKSLSDLHTFTQSTRQRGL*PGGECS
Trigger: ACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCT...AGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTTGTCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTGCTTATCAGGCTTGTTaGCCCACAGCAGCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: YQYSTPSHNSTTYCRSFAAYQAC*PTAAEP
Trigger: AGGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGC...AGCAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp TTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAGGTTCAGGAGCTCTTaGATCACCCTATCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: FLSIYLRSGTTLSKHGAERFRSS*ITLSRG
Trigger: GCCTCTAGATAGGGTGATCCAAGAGCTCCTGAACCT...CTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AATGCTTCACATCTCCTTACACTTATATTCCCATCTAGGGCATTGGAAAATGCCGACTCTGGCCTCCCCTaGCTAGACCGGCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: NASHLLTLIFPSRALENADSGLP*LDRQRS
Trigger: AGATCTCTGCCGGTCTAGCCAGGGGAGGCCAGAGTC...GGCATTTTCCAATGCCCTAGATGGGAATATAAGTGTAAGGAGATGTGAAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTCACACAGGTGGGCTCTaGGGTCCTTGGTCCATTAGG +
Preference number: 4 (lower is better)
Translates to: YQYSTPSHNSTTYCRSFAHTGGL*GPWSIR
Trigger: CCTAATGGACCAAGGACCCCAGAGCCCACCTGTGTG...AGCAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp TCATACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCAAATTGCAGCGTCACACAGGTaGGCTCTGGGGTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SYHPLSSQDQLYRLSNQIAASHR*ALGSLV
Trigger: GACCAAGGACCCCAGAGCCCACCTGTGTGACGCTGC...AATTTGATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp GATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGCAAAAGCATGACAGTAATAACTaGGACAAGACTAATCAACTG +
Preference number: 4 (lower is better)
Translates to: DVLEVYGLPVGPECARQKHDSNN*DKTNQL
Trigger: CAGTTGATTAGTCTTGTCCCAGTTATTACTGTCATG...CTTTTGCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGGAGACAAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTAGCCCTAAAGACAACTaGCCCCGCCAGCCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: WRQSIKSLSDLHTFTQSTSPKDN*PRQPQD
Trigger: ATCCTGAGGCTGGCGGGGCCAGTTGTCTTTAGGGCT...AGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTTGTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGACCCAGAAAGTCACTCCTTGTAGAGGCTTCTaGCTCAGTACCCCTAACCCA +
Preference number: 4 (lower is better)
Translates to: AILRVLLGKLLIKTQKVTPCRGF*LSTPNP
Trigger: TGGGTTAGGGGTACTGAGCCAGAAGCCTCTACAAGG...AGTGACTTTCTGGGTCTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp CCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCTTACAGTCTCACGCCTTCTaGTGTGTCCAGATCACGAAG +
Preference number: 4 (lower is better)
Translates to: PFISDQARPCPNMEQRILQSHAF*CVQITK
Trigger: CTTCGTGATCTGGACACACCAGAAGGCGTGAGACTG...TAAGATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TCCTCATCTTCAGCACTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAAGAGTTAACAGTTGCTaGTATTTTTGTGTAGGCGAC +
Preference number: 4 (lower is better)
Translates to: SSSSALRSPNAELAKGKARVNSC*YFCVGD
Trigger: GTCGCCTACACAAAAATACCAGCAACTGTTAACTCT...TGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGAAGATGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR TCA 90 bp CTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCGTTTTCACAATGAAGCCATTCTaGGAGTGCTTCTCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LPLVLHLCTGNQNVYCVFTMKPF*ECFSES
Trigger: GCTTTCCGAGAAGCACTCTCAGAATGGCTTCATTGT...GAAAACGCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CTTGCACCACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATCTCAAACCAAATGTCTaGTTCATTCATCTTGATGGT +
Preference number: 4 (lower is better)
Translates to: LAPLALPLVLHLCTGNQNLKPNV*FIHLDG
Trigger: ACCATCAAGATGAATGAATCAGACATTTGGTTTGAG...ATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TACCCACGGCACGTGGCAGCTACAAGACCAAGAAGGCAGGGATGGCAAGTTATCCTCAAACCAAATGTCTaGTTCATTCATCTTGATGGT +
Preference number: 4 (lower is better)
Translates to: YPRHVAATRPRRQGWQVILKPNV*FIHLDG
Trigger: ACCATCAAGATGAATGAATCAGACATTTGGTTTGAG...GATAACTTGCCATCCCTGCCTTCTTGGTCTTGTAGCTGCCACGTGCCGTGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR TCA 90 bp GTACAGGGAATCAGAATGTTTACTGCGTTTTCTTGTCTCAGGTTGCCTCGCCCCCTTCACACAGTCTACTaGGGATGTGTTTTGATGGGT +
Preference number: 4 (lower is better)
Translates to: VQGIRMFTAFSCLRLPRPLHTVY*GCVLMG
Trigger: ACCCATCAAAACACATCCTCAGTAGACTGTGTGAAG...GGGGCGAGGCAACCTGAGACAAGAAAACGCAGTAAACATTCTGATTCCCTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GTTAACAGTTGCTGGTATTTTTGTGTAGGCGACAATTCTTATTCCCGTTTCTCTTGTGTGTGCAACTCCTaGGGGCTCTTGCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VNSCWYFCVGDNSYSRFSCVCNS*GLLLAG
Trigger: GCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACA...AGAGAAACGGGAATAAGAATTGTCGCCTACACAAAAATACCAGCAACTGTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CAGGCATGTGCGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCAACAACAAGGGATaGATCAAAATTATGGTACAG +
Preference number: 4 (lower is better)
Translates to: QACAHCSTDVSSYVWSQGSNNKG*IKIMVQ
Trigger: CTGTACCATAATTTTGATTCATCCCTTGTTGTTGGA...TCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCGCACATGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp AGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGTCCAACAACAAGGGATaGATCAAAATTATGGTACAG +
Preference number: 4 (lower is better)
Translates to: RPAEICVNTLWLCVQLLRSNNKG*IKIMVQ
Trigger: CTGTACCATAATTTTGATTCATCCCTTGTTGTTGGA...CCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAGGTTCCATACCTTTTAAAACAAACAACCCCTaGCCAAGAATCCAACAACAA +
Preference number: 4 (lower is better)
Translates to: LRSPNAELAKGKAGSIPFKTNNP*PRIQQQ
Trigger: TTGTTGTTGGATTCTTGGTCAGGGGTTGTTTGTTTT...AAAAGGTATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCACCAACCTAAGCGGTaGACAGAGTTAACAACATTA +
Preference number: 4 (lower is better)
Translates to: RTVAQMCPPMFGARDPHYHQPKR*TELTTL
Trigger: TAATGTTGTTAACTCTGTTCACCGCTTAGGTTGGTG...ATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp AGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAAAAAATGGCTTGCAACTCTaGGTAAAACAGGAATCCCTG +
Preference number: 4 (lower is better)
Translates to: RQDASLGVHQGGGGQCIKNGLQL*VKQESL
Trigger: CAGGGATTCCTGTTTTACTCAGAGTTGCAAGCCATT...TTTTATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATAGGGAACATTCAAGATaGGCCTGGAACATCTTGTTA +
Preference number: 4 (lower is better)
Translates to: RTVAQMCPPMFGARDPHYREHSR*AWNILL
Trigger: TAACAAGATGTTCCAGGCTCATCTTGAATGTTCCCT...ATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGTCGTGGGGACACTACTGGCCTACTTaGTTTCCACACGTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: WKLNEITVRVTGDSWSWGHYWPT*FPHVQA
Trigger: AGCTTGCACGTGTGGAAATCAAGTAGGCCAGTAGTG...TCCCCACGACCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCAGGAGCATTCAGAATaGAAATCTTCTGGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RTVAQMCPPMFGARDPHYQEHSE*KSSGKS
Trigger: ACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTG...ATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR TCA 90 bp TGTTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGATAAAGAGGGAAAGGTaGGCTGGGTCCTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: CSCPFISDQARPCPNMEQIKRER*AGSFHR
Trigger: TCTGTGAAAGGACCCAGCTCACCTTTCCCTCTTTAT...CTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp AGGATCAGTTATACCGACTGTCAAATCAAATTGATCCTCCTGTTCTTCTTCCTCGCCTGGGCAACAGAGTaGGACCCTGCAAAGAGATCC +
Preference number: 4 (lower is better)
Translates to: RISYTDCQIKLILLFFFLAWATE*DPAKRS
Trigger: GGATCTCTTTGCAGGGTCTCACTCTGTTGCCCAGGC...GAGGAAGAAGAACAGGAGGATCAATTTGATTTGACAGTCGGTATAACTGATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559389.1
CDS-3UTR GCA 90 bp CGGAGGGACAATGAAGCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGGTTTCTACAACAGCATaGAGTTTCCGTAAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RRDNEAILRVLLGKLLIKVSTTA*SFRKRC
Trigger: GCAGCGCTTACGGAAACTGCATGCTGTTGTAGAAAC...CTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGCTTCATTGTCCCTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR GCA 90 bp AGGCAGAGGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCATCGTCCTTGGCCTGCTaGAGCTTATCAGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RQRAWLSCLWRQSIKSLSSSLAC*SLSGLL
Trigger: CAACAAGCCTGATAAGCTGCAGCAGGCCAAGGACGA...TGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCCTCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TTCAGCGCTAGCTCTTTCCTATGGTTGACTAGAGTTTCTACAACAGCATGCAGTTCGTCCTTGGCCTGCTaGAGCTTATCAGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: FSASSFLWLTRVSTTACSSSLAC*SLSGLL
Trigger: CAACAAGCCTGATAAGCTGCAGCAGGCCAAGGACGA...ACTGCATGCTGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGCTAGCGCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR GCA 90 bp TGGAGACAAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTCCCTTCCCCTGGTGCTaGATCTGTGTACAGGGAATC +
Preference number: 4 (lower is better)
Translates to: WRQSIKSLSDLHTFTQSTPFPWC*ICVQGI
Trigger: GATTCCCTGTACACAGATGCAGCACCAGGGGAAGGG...AGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTTGTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp AGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAAAATGTAAAGAGTCTCCGTaGTGGAGAACTCAAGATCTC +
Preference number: 4 (lower is better)
Translates to: RQDASLGVHQGGGGQCIKCKESP*WRTQDL
Trigger: GAGATCTTGAGTTCTCCAGCACGGAGACTCTTTACA...TTTTATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560829.5
CDS-3UTR GCA 90 bp ATGGCTAGACTCTTTGCAAACTGGGCTGTGTTCAGCGCTAGCTCTTTCCTATGGTGGCAAGTTATCTGCTaGCCCTCTTCTTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: MARLFANWAVFSASSFLWWQVIC*PSSFSK
Trigger: CTTGGAAAAAGAAGAGGGGCAGCAGATAACTTGCCA...CCATAGGAAAGAGCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCTAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR GCA 90 bp GAAGCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGACCCAGAAAGTCAACAGAGTGAGACCCTaGAAAGAGATCCTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: EAILRVLLGKLLIKTQKVNRVRP*KEILWL
Trigger: GAGCCACAGGATCTCTTTGCAGGGTCTCACTCTGTT...GACTTTCTGGGTCTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559389.1
CDS-3UTR CCA 90 bp GTACAGGGAATCAGAATGTTTACTGCGTTTTCTTGTCTCAGGTTGCCTCGCCCCTGCAAAGAGATCCTGTaGCTCTTGGTCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VQGIRMFTAFSCLRLPRPCKEIL*LLVLFF
Trigger: GAAGAACAAGACCAAGAGCCACAGGATCTCTTTGCA...GGGGCGAGGCAACCTGAGACAAGAAAACGCAGTAAACATTCTGATTCCCTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CGGAGGGACAATGAAGCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGGCTTCGAAGAATTTGTaGCTTCCTGAGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RRDNEAILRVLLGKLLIKASKNL*LPEEEE
Trigger: CTCTTCCTCCTCAGGAAGCCACAAATTCTTCGAAGC...CTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGCTTCATTGTCCCTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559389.1
CDS-3UTR CCA 90 bp GGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCAGACCTTCGGTACCCACGGCACGTaGCAGCTCTTCTTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: GHGFHVYGDKASSHYQTFGTHGT*QLFFFQ
Trigger: TTGGAAAAAGAAGAGCTGCCACGTGCCGTGGGTACC...GAAGGTCTGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TTATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCACCACTCAATGTCTaGGTACCCACGGCACGTGGC +
Preference number: 4 (lower is better)
Translates to: LYQYSTPSHNSTTYCRSFAPLNV*VPTARG
Trigger: GCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGC...AAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp ATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTTCCACCTCAGCCAGCTaGGAGAGTGCCCGTGACAAT +
Preference number: 4 (lower is better)
Translates to: IKSLSDLHTFTQSTEDVFSTSAS*ESARDN
Trigger: ATTGTCACGGGCACTCTCCCAGCTGGCTGAGGTGGA...AAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GTTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTGCTTCTTCTGCAGTGTaGCTTGGGCATCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: VPSYRSIQNENLLGRVNSASSAV*LGHPAS
Trigger: GCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGC...ACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp ATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTGCTTATCAGGCTTGTTaGCCCACAGCAGCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: IKSLSDLHTFTQSTEDVFAYQAC*PTAAEP
Trigger: AGGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGC...AAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp ATCCAGGCATGTGCGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGTGGCTTTCATGTCTATaGAGACAAAGCATCAAGTCA +
Preference number: 4 (lower is better)
Translates to: IQACAHCSTDVSSYVWSQWLSCL*RQSIKS
Trigger: TGACTTGATGCTTTGTCTCCATAGACATGAAAGCCA...CTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCGCACATGCCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGGAGACAAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTTGGCAGGCTACCTCCTaGGCACAGACAGTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: WRQSIKSLSDLHTFTQSTWQATS*AQTVEL
Trigger: AAGCTCTACTGTCTGTGCCCAGGAGGTAGCCTGCCA...AGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTTGTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AATTCTCTTCTTCTCTTAGAAGAGAATGTCCTGTTCTTAGGGAAATGCATACTGCCTGAGGGCTCTTGCTaGCAGGCTACCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: NSLLLLEENVLFLGKCILPEGSC*QATSWA
Trigger: TGCCCAGGAGGTAGCCTGCCAGCAAGAGCCCTCAGG...CAGTATGCATTTCCCTAAGAACAGGACATTCTCTTCTAAGAGAAGAAGAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGGTATTTTCCTGAGGGCTCTTGCTaGCAGGCTACCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RSIQNENLLGRVNSCWYFPEGSC*QATSWA
Trigger: TGCCCAGGAGGTAGCCTGCCAGCAAGAGCCCTCAGG...AAAATACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AATAAACCTACAGGGCTGGTCTCAAAGCATCAGTGTGAATTCATGATTTTTAGTGCAGCGTCACACAGGTaGGCTCTGGGGTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: NKPTGLVSKHQCEFMIFSAASHR*ALGSLV
Trigger: GACCAAGGACCCCAGAGCCCACCTGTGTGACGCTGC...ACTAAAAATCATGAATTCACACTGATGCTTTGAGACCAGCCCTGTAGGTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCTTAGCTCGTTTTTCTCCATaGGCCTCACTGACTTTACCC +
Preference number: 4 (lower is better)
Translates to: PFISDQARPCPNMEQRILARFSP*ASLTLP
Trigger: GGGTAAAGTCAGTGAGGCCCATGGAGAAAAACGAGC...TAAGATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TTACACCTTTTAGACTCAGTTCAAGCATCAGGTTCTCCACAAAGTCCTCCCTCCGACACCCATGTGATGTaGCTCCTGCTCGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LHLLDSVQASGSPQSPPSDTHVM*LLLVFL
Trigger: GAGAAAAACGAGCAGGAGCCACATCACATGGGTGTC...GGAGGGAGGACTTTGTGGAGAACCTGATGCTTGAACTGAGTCTAAAAGGTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGCTATATTCCCCAGGCTaGTCTCAAATTCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: FLSIYLRSGTTLSKHGAELYSPG*SQILGL
Trigger: GAGCCCAAGAATTTGAGACCAGCCTGGGGAATATAG...CTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AACAATCATTCAACAGTTATCTATTTGACACCTGTTTTGAGCCTGAACCTTTGCTCTATGGGCTTCCCGTaGGCCCTGAGTGTGCTCGGC +
Preference number: 4 (lower is better)
Translates to: NNHSTVIYLTPVLSLNLCSMGFP*ALSVLG
Trigger: GCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGA...GCAAAGGTTCAGGCTCAAAACAGGTGTCAAATAGATAACTGTTGAATGATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGGTATTTTTTCTATGGGCTTCCCGTaGGCCCTGAGTGTGCTCGGC +
Preference number: 4 (lower is better)
Translates to: GAFRMKIFWEELTVAGIFSMGFP*ALSVLG
Trigger: GCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGA...AAAAATACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CCA 90 bp CATACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCAAATTGAGTATGAACGCCAGGTaGCAGAGCCTGCAACTGGGG +
Preference number: 4 (lower is better)
Translates to: HTIPYLLRISYTDCQIKLSMNAR*QSLQLG
Trigger: CCCCAGTTGCAGGCTCTGCCACCTGGCGTTCATACT...CAATTTGATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp AATGCTTCACATCTCCTTACACTTATATTCCCATCTAGGGCATTGGAAAATGCCAGTATGAACGCCAGGTaGCAGAGCCTGCAACTGGGG +
Preference number: 4 (lower is better)
Translates to: NASHLLTLIFPSRALENASMNAR*QSLQLG
Trigger: CCCCAGTTGCAGGCTCTGCCACCTGGCGTTCATACT...GGCATTTTCCAATGCCCTAGATGGGAATATAAGTGTAAGGAGATGTGAAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp ACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCAAACTGTTTGCTTCTaGACAATGGTAAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: TGPSPGAASVYRESECLLQTVCF*TMVSLS
Trigger: AGACAAGCTTACCATTGTTCAGAAGCAAACAGTTTG...CAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GACAATGAAGCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGACCCAGACAATGAAGCCATTCTaGGAGTGCTTCTCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: DNEAILRVLLGKLLIKTQTMKPF*ECFSES
Trigger: GCTTTCCGAGAAGCACTCTCAGAATGGCTTCATTGT...CTGGGTCTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGCTTCATTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559389.1
ENST00000560260.5
CDS-3UTR TCA 90 bp AATGCTTCACATCTCCTTACACTTATATTCCCATCTAGGGCATTGGAAAATGCCGGAGTATTCCAGACCTaGTTCCCAACTGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: NASHLLTLIFPSRALENAGVFQT*FPTAPQ
Trigger: CTGGGGAGCAGTTGGGAATCAGGTCTGGAATACTCC...GGCATTTTCCAATGCCCTAGATGGGAATATAAGTGTAAGGAGATGTGAAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp ACCCTATGGATGCCTTCAAATTACACAGCTTTACAGATCAACTTTGTGAAGATAAAGCCCATCCTTGACTaGCGAGACTCTGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TLWMPSNYTALQINFVKIKPILD*RDSGLP
Trigger: GGGGAGGCCAGAGTCTCGTCAGTCAAGGATGGGCTT...TATCTTCACAAAGTTGATCTGTAAAGCTGTGTAATTTGAAGGCATCCATAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CCAAAGTTGATGGTAAGGATACTGAGGGGTAGGGAGAGTGACTTTTTCCAAAAAAGGTGGAGGTTGCAGTaGGCTGAGATTGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: PKLMVRILRGRESDFFQKRWRLQ*AEIVPL
Trigger: CAATGGCACAATCTCAGCTCACTGCAACCTCCACCT...TTTTTGGAAAAAGTCACTCTCCCTACCCCTCAGTATCCTTACCATCAACTTTGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTATTTTGTCACTGAGTACTGCTGCCATGTCTTCATaGGCTGGTCGAAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: CRRQFLFPFLSFILSLSTAAMSS*AGRRQR
Trigger: GCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGC...AGTACTCAGTGACAAAATAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTATTTTGTCACTGAGTACTGTGGCTTGGGCATCCTaGCAGCGCTGCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: CRRQFLFPFLSFILSLSTVAWAS*QRCHVF
Trigger: GAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCAC...AGTACTCAGTGACAAAATAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp AGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGGTATTTTGCCTCCCGCTTCTTCTaGAGTGTGGCTTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: RSIQNENLLGRVNSCWYFASRFF*SVAWAS
Trigger: GGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGC...AAAATACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp GGTAATGAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTTGGCCCTTCCCCTGGTaGTGCATCTGTGTACAGGGA +
Preference number: 4 (lower is better)
Translates to: GNERQKKVEESAVLRDTRWPFPW*CICVQG
Trigger: TCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCA...ACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTCATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp GGTGGAGACTGTAAATCACCCAACTTTATCACAAGATGCAGTTATCGGCAGGTGCTGCCCCAAACCTATTaGCTCATGTGTTACAAAGGG +
Preference number: 4 (lower is better)
Translates to: GGDCKSPNFITRCSYRQVLPQTY*LMCYKG
Trigger: CCCTTTGTAACACATGAGGCAATAGGTTTGGGGCAG...CACCTGCCGATAACTGCATCTTGTGATAAAGTTGGGTGATTTACAGTCTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp GAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTTTACAACTGGGCCTACAGGCATaGACCACCACACACCCAGCT +
Preference number: 4 (lower is better)
Translates to: ERQKKVEESAVLRDTRLQLGLQA*TTTHPA
Trigger: AGCTGGGTGTGTGGTGGTGCATGCCTGTAGGCCCAG...TTGTAAACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp AATAAACCTACAGGGCTGGTCTCAAAGCATCAGTGTGAATTCATGATTTTTAGTCTGGGCCTACAGGCATaGACCACCACACACCCAGCT +
Preference number: 4 (lower is better)
Translates to: NKPTGLVSKHQCEFMIFSLGLQA*TTTHPA
Trigger: AGCTGGGTGTGTGGTGGTGCATGCCTGTAGGCCCAG...ACTAAAAATCATGAATTCACACTGATGCTTTGAGACCAGCCCTGTAGGTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CGGAGGGACAATGAAGCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGAGATCCTGTGGCTCTTaGTCTTGTTCTTCATGGATC +
Preference number: 4 (lower is better)
Translates to: RRDNEAILRVLLGKLLIKRSCGS*SCSSWI
Trigger: GATCCATGAAGAACAAGACCAAGAGCCACAGGATCT...CTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGCTTCATTGTCCCTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559389.1
ENST00000560260.5
CDS-3UTR CCA 90 bp TGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGTCGTGGGGAGCTTCGAAGAATTTGTaGCTTCCTGAGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: WKLNEITVRVTGDSWSWGASKNL*LPEEEE
Trigger: CTCTTCCTCCTCAGGAAGCCACAAATTCTTCGAAGC...TCCCCACGACCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp AATTCTCTTCTTCTCTTAGAAGAGAATGTCCTGTTCTTAGGGAAATGCATACTGGCACCACTCAATGTCTaGGTACCCACGGCACGTGGC +
Preference number: 4 (lower is better)
Translates to: NSLLLLEENVLFLGKCILAPLNV*VPTARG
Trigger: GCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGC...CAGTATGCATTTCCCTAAGAACAGGACATTCTCTTCTAAGAGAAGAAGAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TTATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTAGGCAGCGCGGACTATaGCCAGGAGGCGAATGTAGT +
Preference number: 4 (lower is better)
Translates to: LYQYSTPSHNSTTYCRSFRQRGL*PGGECS
Trigger: ACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCT...AAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp GGTAATGAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTCATGTCTTCATGCGCTaGTCGAAGGCAGCGCGGACT +
Preference number: 4 (lower is better)
Translates to: GNERQKKVEESAVLRDTRHVFMR*SKAART
Trigger: AGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATG...ACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTCATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TCATACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCAAATTCATGTCTTCATGCGCTaGTCGAAGGCAGCGCGGACT +
Preference number: 4 (lower is better)
Translates to: SYHPLSSQDQLYRLSNQIHVFMR*SKAART
Trigger: AGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATG...AATTTGATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp TTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTTCTTCTGCAGTGTaGCTTGGGCATCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: FLATGAFRMKIFWEELTVASSAV*LGHPAS
Trigger: GCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGC...AACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TTATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTTCTTCTGCAGTGTaGCTTGGGCATCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LYQYSTPSHNSTTYCRSFASSAV*LGHPAS
Trigger: GCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGC...AAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp ACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGTGGCTTTCATGTCTATaGAGACAAAGCATCAAGTCA +
Preference number: 4 (lower is better)
Translates to: TGPSPGAASVYRESECLLWLSCL*RQSIKS
Trigger: TGACTTGATGCTTTGTCTCCATAGACATGAAAGCCA...CAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AGGCAGAGGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCAAGGTTCAGGAGCTCTTaGATCACCCTATCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: RQRAWLSCLWRQSIKSLSRFRSS*ITLSRG
Trigger: GCCTCTAGATAGGGTGATCCAAGAGCTCCTGAACCT...TGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCCTCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp ATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTAAATACTTGCACCACTaGCCCTTCCCCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: IKSLSDLHTFTQSTEDVFKYLHH*PFPWCC
Trigger: GCAGCACCAGGGGAAGGGCCAGTGGTGCAAGTATTT...AAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTGATGGACATTTCAATTGGCTTCAGTTTTTGCAACTGTAAACAGTGCTATGACGTAACTGGGGACAGTTaGTCGTGGGGACAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LMDISIGFSFCNCKQCYDVTGDS*SWGQGG
Trigger: TCCTCCCTGTCCCCACGACCAACTGTCCCCAGTTAC...GTCATAGCACTGTTTACAGTTGCAAAAACTGAAGCCAATTGAAATGTCCATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AAATATATATGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGTGTCTGCCCAGTGTCTaGGCCAGAAGCTTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: KYIWKLNEITVRVTGDSWCLPSV*ARSLRG
Trigger: GCCCCGCAAGCTTCTGGCCCAGACACTGGGCAGACA...CCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCATATATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp ACTCAAAACATGATGGGAGCAAGCTACAAACACACAAGAGGCCGCTATAAATCTAGGTGTCGGCGCTGTTaGGAAGGACTGGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: TQNMMGASYKHTRGRYKSRCRRC*EGLGDK
Trigger: TTTATCTCCCAGTCCTTCCCAACAGCGCCGACACCT...AGATTTATAGCGGCCTCTTGTGTGTTTGTAGCTTGCTCCCATCATGTTTTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CAA 72 bp TTGATGGTCATTTTGCTGACGGCATCTGTGGCTTTGTaGAACATCTTGAGGAGACCAGCACCACTCAATGTC +
Preference number: 4 (lower is better)
Translates to: LMVILLTASVAL*NILRRPAPLNV
Trigger: GACATTGAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGCCACAGATGCCGTCAGCAAAATGACCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
3UTR CAA 72 bp TTCTGGCTCAGTACCCCTAACCCACTACTGGCCTACTaGATTTCCACACGTGCAAGCTCTTTACAAAAATGC +
Preference number: 4 (lower is better)
Translates to: FWLSTPNPLLAY*ISTRASSLQKC
Trigger: GCATTTTTGTAAAGAGCTTGCACGTGTGGAAATCAAGTAGGCCAGTAGTGGGTTAGGGGTACTGAGCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp ACCCTATGGATGCCTTCAAATTACACAGCTTTACAGATCAACTTTGTGAAGATAGGGGCGGAGGGACAATaGAGCCATTCTGAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: TLWMPSNYTALQINFVKIGAEGQ*SHSESA
Trigger: AGCACTCTCAGAATGGCTTCATTGTCCCTCCGCCCC...TATCTTCACAAAGTTGATCTGTAAAGCTGTGTAATTTGAAGGCATCCATAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp AATTCTCTTCTTCTCTTAGAAGAGAATGTCCTGTTCTTAGGGAAATGCATACTGCCCACCAAAGAGAACTaGTACAGCAGGACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: NSLLLLEENVLFLGKCILPTKEN*YSRTWG
Trigger: GCCCCAGGTCCTGCTGTATCAGTTCTCTTTGGTGGG...CAGTATGCATTTCCCTAAGAACAGGACATTCTCTTCTAAGAGAAGAAGAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp ACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGAAGACAAAAGAAAGTTaGGGAATCTGCAGTATTGAG +
Preference number: 4 (lower is better)
Translates to: TGPSPGAASVYRESECLLKTKES*GICSIE
Trigger: CTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTT...CAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp ATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTAGGTGGAGGTTGCAGTaGGCTGAGATTGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: IKSLSDLHTFTQSTEDVFRWRLQ*AEIVPL
Trigger: CAATGGCACAATCTCAGCTCACTGCAACCTCCACCT...AAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp AAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTATCAGACACCCATGTaGTGTGGCTCCTGCTCGTTT +
Preference number: 4 (lower is better)
Translates to: KASSHYQTFTPSHSLLRMYQTPM*CGSCSF
Trigger: AAACGAGCAGGAGCCACATCACATGGGTGTCTGATA...CATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGTTTAATTATCAAGCATaGAACTTCCCCTCTTCGGCC +
Preference number: 4 (lower is better)
Translates to: FLSIYLRSGTTLSKHGAEFNYQA*NFPSSA
Trigger: GGCCGAAGAGGGGAAGTTTCATGCTTGATAATTAAA...CTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GTTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTGCAGTTATCGGCAGGTaGCACATGCACCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: VPSYRSIQNENLLGRVNSAVIGR*HMHQKT
Trigger: TGTCTTCTGGTGCATGTGTCACCTGCCGATAACTGC...ACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp CAAAGGAGCTTCAAAGCCCACTCTGACCAGTATAGCTTGAGCAGCTGTGGACACTTTGTAGGCTACATATaGATTCATACCATCCCCTAT +
Preference number: 4 (lower is better)
Translates to: QRSFKAHSDQYSLSSCGHFVGYI*IHTIPY
Trigger: ATAGGGGATGGTATGAATGCATATGTAGCCTACAAA...GTGTCCACAGCTGCTCAAGCTATACTGGTCAGAGTGGGCTTTGAAGCTCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp AGGCAGAGGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCAGTTTCTACAACAGCATaGAGTTTCCGTAAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RQRAWLSCLWRQSIKSLSVSTTA*SFRKRC
Trigger: GCAGCGCTTACGGAAACTGCATGCTGTTGTAGAAAC...TGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCCTCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGATCTCGTCCTTGGCCTaGTGCAGCTTATCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: YINTPPHPIIPPPIVGLLISSLA*CSLSGL
Trigger: CAAGCCTGATAAGCTGCAGCAGGCCAAGGACGAGAT...CAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR GCA 90 bp ACCCTATGGATGCCTTCAAATTACACAGCTTTACAGATCAACTTTGTGAAGATAGACCTGATTCCCAACTaGTCCCCAGCCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TLWMPSNYTALQINFVKIDLIPN*SPACCC
Trigger: ACAGCAGCAGGCTGGGGAGCAGTTGGGAATCAGGTC...TATCTTCACAAAGTTGATCTGTAAAGCTGTGTAATTTGAAGGCATCCATAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261889.9
CDS-3UTR GCA 90 bp CAAAGGAGCTTCAAAGCCCACTCTGACCAGTATAGCTTGAGCAGCTGTGGACACAGCTCTTTACAAAAATaGACAAGCCCTAAAGACAAC +
Preference number: 4 (lower is better)
Translates to: QRSFKAHSDQYSLSSCGHSSLQK*TSPKDN
Trigger: GTTGTCTTTAGGGCTTGTGCATTTTTGTAAAGAGCT...GTGTCCACAGCTGCTCAAGCTATACTGGTCAGAGTGGGCTTTGAAGCTCCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TTTATCACAAGATGCAGTTATCGGCAGGTGACACATGCACCAGAAGACAGGCTTTGCAACTGTAAACAGTaGTATGACGGGCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: FITRCSYRQVTHAPEDRLCNCKQ*YDGHFW
Trigger: CCAGAAATGCCCGTCATAGCACTGTTTACAGTTGCA...AAGCCTGTCTTCTGGTGCATGTGTCACCTGCCGATAACTGCATCTTGTGATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGTCGTGGGGAAGATCCTGTGGCTCTTaGTCTTGTTCTTCATGGATC +
Preference number: 4 (lower is better)
Translates to: WKLNEITVRVTGDSWSWGRSCGS*SCSSWI
Trigger: GATCCATGAAGAACAAGACCAAGAGCCACAGGATCT...TCCCCACGACCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp GTTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTGGTACCCACGGCACGTaGCAGCTCTTCTTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: VPSYRSIQNENLLGRVNSGTHGT*QLFFFQ
Trigger: TTGGAAAAAGAAGAGCTGCCACGTGCCGTGGGTACC...ACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GTACAGGGAATCAGAATGTTTACTGCGTTTTCTTGTCTCAGGTTGCCTCGCCCCGCTAGCTCTTTCCTATaGTTGACTAGAGTTTCTACA +
Preference number: 4 (lower is better)
Translates to: VQGIRMFTAFSCLRLPRPASSFL*LTRVST
Trigger: TGTAGAAACTCTAGTCAACCATAGGAAAGAGCTAGC...GGGGCGAGGCAACCTGAGACAAGAAAACGCAGTAAACATTCTGATTCCCTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGAGACTCTTTGCAAACTaGGCTGTGTTCAGCGCTAGC +
Preference number: 4 (lower is better)
Translates to: KASSHYQTFTPSHSLLRMRLFAN*AVFSAS
Trigger: GCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCT...CATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp ACCCTATGGATGCCTTCAAATTACACAGCTTTACAGATCAACTTTGTGAAGATATCCACCTCAGCCAGCTaGGAGAGTGCCCGTGACAAT +
Preference number: 4 (lower is better)
Translates to: TLWMPSNYTALQINFVKISTSAS*ESARDN
Trigger: ATTGTCACGGGCACTCTCCCAGCTGGCTGAGGTGGA...TATCTTCACAAAGTTGATCTGTAAAGCTGTGTAATTTGAAGGCATCCATAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TTTATCACAAGATGCAGTTATCGGCAGGTGACACATGCACCAGAAGACAGGCTTTTGTTGGCCTGTTCCTaGTGGAGCTGCTCAATTTTT +
Preference number: 4 (lower is better)
Translates to: FITRCSYRQVTHAPEDRLLLACS*WSCSIF
Trigger: AAAAATTGAGCAGCTCCACCAGGAACAGGCCAACAA...AAGCCTGTCTTCTGGTGCATGTGTCACCTGCCGATAACTGCATCTTGTGATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CCAAAGTTGATGGTAAGGATACTGAGGGGTAGGGAGAGTGACTTTTTCCAAAAAGGAAGAAGTCATTGTTaGCCTGTTCCTGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PKLMVRILRGRESDFFQKGRSHC*PVPGGA
Trigger: AGCTCCACCAGGAACAGGCCAACAATGACTTCTTCC...TTTTTGGAAAAAGTCACTCTCCCTACCCCTCAGTATCCTTACCATCAACTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AACAATCATTCAACAGTTATCTATTTGACACCTGTTTTGAGCCTGAACCTTTGCCATGTCTTCATGCGCTaGTCGAAGGCAGCGCGGACT +
Preference number: 4 (lower is better)
Translates to: NNHSTVIYLTPVLSLNLCHVFMR*SKAART
Trigger: AGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATG...GCAAAGGTTCAGGCTCAAAACAGGTGTCAAATAGATAACTGTTGAATGATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp ACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGAAAACTTACTATACCTaGGCAACTTCTTGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: TGPSPGAASVYRESECLLKTYYT*ATSWLG
Trigger: TCCTAACCAAGAAGTTGCCCAGGTATAGTAAGTTTT...CAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TTTATCACAAGATGCAGTTATCGGCAGGTGACACATGCACCAGAAGACAGGCTTGCTTCGAAGAATTTGTaGCTTCCTGCAAAGAGATCC +
Preference number: 4 (lower is better)
Translates to: FITRCSYRQVTHAPEDRLASKNL*LPAKRS
Trigger: GGATCTCTTTGCAGGAAGCCACAAATTCTTCGAAGC...AAGCCTGTCTTCTGGTGCATGTGTCACCTGCCGATAACTGCATCTTGTGATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp ACCCTATGGATGCCTTCAAATTACACAGCTTTACAGATCAACTTTGTGAAGATAGTAACTGGGGACAGTTaGTCGTGGGGACAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TLWMPSNYTALQINFVKIVTGDS*SWGQGG
Trigger: TCCTCCCTGTCCCCACGACCAACTGTCCCCAGTTAC...TATCTTCACAAAGTTGATCTGTAAAGCTGTGTAATTTGAAGGCATCCATAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTTTACAAAGCCCTAAAGACAACTaGCCCCGCCAGCCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: ERQKKVEESAVLRDTRLQSPKDN*PRQPQD
Trigger: ATCCTGAGGCTGGCGGGGCCAGTTGTCTTTAGGGCT...TTGTAAACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGCATTCATACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCAAGGACCGATCTCAGTaGTTCCGAAACTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: CIHTIPYLLRISYTDCQIKDRSQ*FRNSPE
Trigger: CTCAGGAGAGTTTCGGAACCACTGAGATCGGTCCTT...GATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTATGAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp ACCCTATGGATGCCTTCAAATTACACAGCTTTACAGATCAACTTTGTGAAGATAGCAACCTCAACCTCCTaGGCTCAGGTGATGTTCCCG +
Preference number: 4 (lower is better)
Translates to: TLWMPSNYTALQINFVKIATSTS*AQVMFP
Trigger: CGGGAACATCACCTGAGCCCAGGAGGTTGAGGTTGC...TATCTTCACAAAGTTGATCTGTAAAGCTGTGTAATTTGAAGGCATCCATAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTTGATGGGACTGACACTGAATACTaGGATCACACCAGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: HYQTFTPSHSLLRMCFDGTDTEY*DHTSSK
Trigger: CTTCGAGCTGGTGTGATCCCAGTATTCAGTGTCAGT...CCCATCAAAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTTCTCTATGACGGGCATTTCTaGTTAGTCATCTTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: VAQMCPPMFGARDPHYLLYDGHF*LVIFKD
Trigger: ATCCTTGAAGATGACTAACCAGAAATGCCCGTCATA...GAGAAGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTTGCAAACTGGGCTGTGTTCAGATGGACATTTCAATTaGCTTCAGTTTTTGCAACTG +
Preference number: 4 (lower is better)
Translates to: CPQSSQAWLDSLQTGLCSDGHFN*LQFLQL
Trigger: CAGTTGCAAAAACTGAAGCCAATTGAAATGTCCATC...TGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp TGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGTCGTGGGGAAAAGAGTCTCCGTGCTaGAGAACTCAAGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: WKLNEITVRVTGDSWSWGKESPC*RTQDLL
Trigger: AAGGAGATCTTGAGTTCTCCAGCACGGAGACTCTTT...TCCCCACGACCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560829.5
CDS-3UTR CCA 90 bp TGCATTCATACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCCTCAGAAGGTTGAGGTaGGAAGATCACTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CIHTIPYLLRISYTDCQILRRLR*EDHLSL
Trigger: CAGGCTCAAGTGATCTTCCCACCTCAACCTTCTGAG...GATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTATGAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559389.1
CDS-3UTR TCA 90 bp AGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAAAACTCAAACCAAATGTCTaGTTCATTCATCTTGATGGT +
Preference number: 4 (lower is better)
Translates to: RQDASLGVHQGGGGQCIKLKPNV*FIHLDG
Trigger: ACCATCAAGATGAATGAATCAGACATTTGGTTTGAG...TTTTATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR TCA 90 bp GATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCTCAAACCAAATGTCTaGTTCATTCATCTTGATGGT +
Preference number: 4 (lower is better)
Translates to: DASLGVHQGGGGQCIKRQLKPNV*FIHLDG
Trigger: ACCATCAAGATGAATGAATCAGACATTTGGTTTGAG...CTGCCTTTTTATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR TCA 90 bp CCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCTTAGCTCTTTCCTATGGTTaGCTAGAGTTTCTACAACAG +
Preference number: 4 (lower is better)
Translates to: PFISDQARPCPNMEQRILALSYG*LEFLQQ
Trigger: CTGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGC...TAAGATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp AATGCTTCACATCTCCTTACACTTATATTCCCATCTAGGGCATTGGAAAATGCCAAGTCCCTTTCATATTaGGTCACCCGAGACTCCCAC +
Preference number: 4 (lower is better)
Translates to: NASHLLTLIFPSRALENAKSLSY*VTRDSH
Trigger: GTGGGAGTCTCGGGTGACTCAATATGAAAGGGACTT...GGCATTTTCCAATGCCCTAGATGGGAATATAAGTGTAAGGAGATGTGAAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTTTTTCGGACCACTGTTaGAATCCTCTCGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: YQYSTPSHNSTTYCRSFAFSDHC*NPLEVP
Trigger: AGGGACTTCGAGAGGATTTCAACAGTGGTCCGAAAA...AGCAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR TCA 90 bp AGTTGCTGGTATTTTTGTGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTAGGAGTATTCCAGACCTaGTTCCCAACTGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SCWYFCVGDNSYSRFSHLGVFQT*FPTAPQ
Trigger: CTGGGGAGCAGTTGGGAATCAGGTCTGGAATACTCC...TAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACACAAAAATACCAGCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR TCA 90 bp GAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTTTACAACGGCAGAGATCTGTGTaGACACCCTTTGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: ERQKKVEESAVLRDTRLQRQRSV*TPFGCV
Trigger: CACACAGCCAAAGGGTGTTCACACAGATCTCTGCCG...TTGTAAACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTATTAATGGGACCAACTaGCATTATATGCTGATTACG +
Preference number: 4 (lower is better)
Translates to: HCSTDVSSYVWSQGSPLSINGTN*HYMLIT
Trigger: CGTAATCAGCATATAATGTCAGTTGGTCCCATTAAT...AGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TCTTCCTTTGTGCTCCTGTTATTCCTTGTAGAGGCTTCTGGCTCAGTACCCCTAAAAGTACTCAAAACATaGTGGGAGCAAGCTACAAAC +
Preference number: 4 (lower is better)
Translates to: SSFVLLLFLVEASGSVPLKVLKT*WEQATN
Trigger: GTTTGTAGCTTGCTCCCATCATGTTTTGAGTACTTT...TAGGGGTACTGAGCCAGAAGCCTCTACAAGGAATAACAGGAGCACAAAGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp AAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGCAGAGGAGGAAGTTCTaGAACCAGAGGAGACATCAT +
Preference number: 4 (lower is better)
Translates to: KASSHYQTFTPSHSLLRMQRRKF*NQRRHH
Trigger: ATGATGTCTCCTCTGGTTTCAGAACTTCCTCCTCTG...CATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp CTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCGTTTTCAAAGAGAAAGGCTCTTaGTTAATGATAGGGACACCA +
Preference number: 4 (lower is better)
Translates to: LPLVLHLCTGNQNVYCVFKEKGS*LMIGTP
Trigger: TGGTGTCCCTATCATTAAGCAAGAGCCTTTCTCTTT...GAAAACGCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCGGAAGAGTTAACAGTTaGTGGTATTTTTGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: CPFISDQARPCPNMEQRIGRVNS*WYFCVG
Trigger: GCCTACACAAAAATACCAGCAACTGTTAACTCTTCC...GATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR GCA 90 bp TTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTCCAGGTGGCAGAGCCTaGAACTGGGGAACAATCATT +
Preference number: 4 (lower is better)
Translates to: FLATGAFRMKIFWEELTVPGGRA*NWGTII
Trigger: AATGATTGTTCCCCAGTTGCAGGCTCTGCCACCTGG...AACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGGCTTCGAAGAATTTGTaGCTTCCTGAGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KASSHYQTFTPSHSLLRMASKNL*LPEEEE
Trigger: CTCTTCCTCCTCAGGAAGCCACAAATTCTTCGAAGC...CATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261889.9
ENST00000559844.6
CDS-3UTR CCA 90 bp TATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGGGAAGAAGTCATTGTTaGCCTGTTCCTGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: YINTPPHPIIPPPIVGLLGRSHC*PVPGGA
Trigger: AGCTCCACCAGGAACAGGCCAACAATGACTTCTTCC...CAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp AAATATATATGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGCATGTCTTCATGCGCTaGTCGAAGGCAGCGCGGACT +
Preference number: 4 (lower is better)
Translates to: KYIWKLNEITVRVTGDSWHVFMR*SKAART
Trigger: AGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATG...CCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCATATATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp ACCCTATGGATGCCTTCAAATTACACAGCTTTACAGATCAACTTTGTGAAGATACGAGGATCTCGTCCTTaGCCTGCTGCAGCTTATCAG +
Preference number: 4 (lower is better)
Translates to: TLWMPSNYTALQINFVKIRGSRP*PAAAYQ
Trigger: CTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCG...TATCTTCACAAAGTTGATCTGTAAAGCTGTGTAATTTGAAGGCATCCATAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp ACCCTATGGATGCCTTCAAATTACACAGCTTTACAGATCAACTTTGTGAAGATATGGCAGGCTACCTCCTaGGCACAGACAGTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: TLWMPSNYTALQINFVKIWQATS*AQTVEL
Trigger: AAGCTCTACTGTCTGTGCCCAGGAGGTAGCCTGCCA...TATCTTCACAAAGTTGATCTGTAAAGCTGTGTAATTTGAAGGCATCCATAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AGTTGCTGGTATTTTTGTGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTAAAATACTTGCACCACTaGCCCTTCCCCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SCWYFCVGDNSYSRFSHLKYLHH*PFPWCC
Trigger: GCAGCACCAGGGGAAGGGCCAGTGGTGCAAGTATTT...TAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACACAAAAATACCAGCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGTGGTCCATTAGGAGATaGCCTTTGCCTCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: YINTPPHPIIPPPIVGLLWSIRR*PLPQEG
Trigger: TCCTTCCTGAGGCAAAGGCCATCTCCTAATGGACCA...CAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CCA 90 bp GTTGTTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCTATGACGGGCATTTCTaGTTAGTCATCTTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: VVLVHLSQIRHDPVQTWSYDGHF*LVIFKD
Trigger: ATCCTTGAAGATGACTAACCAGAAATGCCCGTCATA...GCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CAA 72 bp ACGGTAGAGAAAAACTTACTATACCTGGGCAACTTCTaGGTTAGGAGTATTCCAGACCTGATTCCCAACTGC +
Preference number: 4 (lower is better)
Translates to: TVEKNLLYLGNF*VRSIPDLIPNC
Trigger: GCAGTTGGGAATCAGGTCTGGAATACTCCTAACCAAGAAGTTGCCCAGGTATAGTAAGTTTTTCTCTACCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGTTTCCAAGAACTCTCTaGCGTCAGGGTCCTGTAACA +
Preference number: 4 (lower is better)
Translates to: YINTPPHPIIPPPIVGLLFPRTL*RQGPVT
Trigger: TGTTACAGGACCCTGACGTCAGAGAGTTCTTGGAAA...CAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR TCA 90 bp AATTCTCTTCTTCTCTTAGAAGAGAATGTCCTGTTCTTAGGGAAATGCATACTGCTCAGAACAGGTAGCTaGGGTAGGCGGAGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: NSLLLLEENVLFLGKCILLRTGS*GRRRER
Trigger: TCTTTCTCTCCGCCTACCTCAGCTACCTGTTCTGAG...CAGTATGCATTTCCCTAAGAACAGGACATTCTCTTCTAAGAGAAGAAGAGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGTCGTGGGGAACTGAGGATGTGTTTTaGTGGGTGACAAAAATAGGT +
Preference number: 4 (lower is better)
Translates to: WKLNEITVRVTGDSWSWGTEDVF*WVTKIG
Trigger: ACCTATTTTTGTCACCCATCAAAACACATCCTCAGT...TCCCCACGACCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GTTGTTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCCACACAAATCCAAACTaGGGAACATTCGACAAAATA +
Preference number: 4 (lower is better)
Translates to: VVLVHLSQIRHDPVQTWSHTNPN*GTFDKI
Trigger: TATTTTGTCGAATGTTCCTCAGTTTGGATTTGTGTG...GCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp ACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTTCACACAAATCCAAACTaGGGAACATTCGACAAAATA +
Preference number: 4 (lower is better)
Translates to: TVAQMCPPMFGARDPHYLHTNPN*GTFDKI
Trigger: TATTTTGTCGAATGTTCCTCAGTTTGGATTTGTGTG...AAGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TTGTTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCACTTAACAAAGCAACCTaGAATCTTTGTCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LFLSIYLRSGTTLSKHGALNKAT*NLCLSG
Trigger: TCCAGAGAGACAAAGATTTCAGGTTGCTTTGTTAAG...TGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp CGGAGGGACAATGAAGCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGTTTGTAGGCTACATATaGATTCATACCATCCCCTAT +
Preference number: 4 (lower is better)
Translates to: RRDNEAILRVLLGKLLIKFVGYI*IHTIPY
Trigger: ATAGGGGATGGTATGAATGCATATGTAGCCTACAAA...CTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGCTTCATTGTCCCTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559389.1
CDS-3UTR GCA 90 bp TCTTCCTTTGTGCTCCTGTTATTCCTTGTAGAGGCTTCTGGCTCAGTACCCCTATTTGTAGGCTACATATaGATTCATACCATCCCCTAT +
Preference number: 4 (lower is better)
Translates to: SSFVLLLFLVEASGSVPLFVGYI*IHTIPY
Trigger: ATAGGGGATGGTATGAATGCATATGTAGCCTACAAA...TAGGGGTACTGAGCCAGAAGCCTCTACAAGGAATAACAGGAGCACAAAGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp ATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTGTTTCTACAACAGCATaGAGTTTCCGTAAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: IKSLSDLHTFTQSTEDVFVSTTA*SFRKRC
Trigger: GCAGCGCTTACGGAAACTGCATGCTGTTGTAGAAAC...AAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TTGTTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGTTATATATAAGACTTaGCATCAGAGGGCAAGACTC +
Preference number: 4 (lower is better)
Translates to: LFLSIYLRSGTTLSKHGAVIYKT*HQRARL
Trigger: GAGTCTTGCCCTCTGATGGCAAGTCTTATATATAAC...TGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp GGTAATGAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTTTTCTTGTCTCAGGTTaGCTCGCCCCAAACCTTAGC +
Preference number: 4 (lower is better)
Translates to: GNERQKKVEESAVLRDTRFLVSG*LAPNLS
Trigger: GCTAAGGTTTGGGGCGAGGCAACCTGAGACAAGAAA...ACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTCATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCGTTTTCGGATGTAGTTATCTTTaGAGACTGATGTTTACTGAC +
Preference number: 4 (lower is better)
Translates to: LPLVLHLCTGNQNVYCVFGCSYL*RLMFTD
Trigger: GTCAGTAAACATCAGTCTCCAAAGATAACTACATCC...GAAAACGCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGGTAGATCCTGTGGCTCTTaGTCTTGTTCTTCATGGATC +
Preference number: 4 (lower is better)
Translates to: ATGAFRMKIFWEELTVAGRSCGS*SCSSWI
Trigger: GATCCATGAAGAACAAGACCAAGAGCCACAGGATCT...ACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp ATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTCAGAGCTCCCAAGCATaGCTAGACTCTTTGCAAACT +
Preference number: 4 (lower is better)
Translates to: IKSLSDLHTFTQSTEDVFQSSQA*LDSLQT
Trigger: AGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTG...AAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTTGTTGGCCTGTTCCTaGTGGAGCTGCTCAATTTTT +
Preference number: 4 (lower is better)
Translates to: KASSHYQTFTPSHSLLRMLLACS*WSCSIF
Trigger: AAAAATTGAGCAGCTCCACCAGGAACAGGCCAACAA...CATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCAAAACTTACTATACCTaGGCAACTTCTTGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: CPFISDQARPCPNMEQRIKTYYT*ATSWLG
Trigger: TCCTAACCAAGAAGTTGCCCAGGTATAGTAAGTTTT...GATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTATTGCCTCATGTGTTACAAAGGGTTTCATTGTCTGCCCAGTGTCTGGGCCAGGATGAATCAAAATTATaGTACAGTCACCCTATGGAT +
Preference number: 4 (lower is better)
Translates to: LLPHVLQRVSLSAQCLGQDESKL*YSHPMD
Trigger: ATCCATAGGGTGACTGTACCATAATTTTGATTCATC...CTGGCCCAGACACTGGGCAGACAATGAAACCCTTTGTAACACATGAGGCAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GTACAGGGAATCAGAATGTTTACTGCGTTTTCTTGTCTCAGGTTGCCTCGCCCCAAATCTTTGTCTCTCTaGAGGAAAGAGTTAACAACA +
Preference number: 4 (lower is better)
Translates to: VQGIRMFTAFSCLRLPRPKSLSL*RKELTT
Trigger: TGTTGTTAACTCTTTCCTCCAGAGAGACAAAGATTT...GGGGCGAGGCAACCTGAGACAAGAAAACGCAGTAAACATTCTGATTCCCTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TTATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTCGTTTTTCTCCATaGGCCTCACTGACTTTACCC +
Preference number: 4 (lower is better)
Translates to: LYQYSTPSHNSTTYCRSFARFSP*ASLTLP
Trigger: GGGTAAAGTCAGTGAGGCCCATGGAGAAAAACGAGC...AAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTTGATGGGCAAACTGTTTGCTTCTaGACAATGGTAAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: HYQTFTPSHSLLRMCFDGQTVCF*TMVSLS
Trigger: AGACAAGCTTACCATTGTTCAGAAGCAAACAGTTTG...CCCATCAAAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCAGACCTTCCAAACTGTTTGCTTCTaGACAATGGTAAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GHGFHVYGDKASSHYQTFQTVCF*TMVSLS
Trigger: AGACAAGCTTACCATTGTTCAGAAGCAAACAGTTTG...GAAGGTCTGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp AATTCTCTTCTTCTCTTAGAAGAGAATGTCCTGTTCTTAGGGAAATGCATACTGAAGTCCCTTTCATATTaGGTCACCCGAGACTCCCAC +
Preference number: 4 (lower is better)
Translates to: NSLLLLEENVLFLGKCILKSLSY*VTRDSH
Trigger: GTGGGAGTCTCGGGTGACTCAATATGAAAGGGACTT...CAGTATGCATTTCCCTAAGAACAGGACATTCTCTTCTAAGAGAAGAAGAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp CTAAATCTTCTTTTTACTGCAAACTGTTTGCTTCTGAACAATGGTAAGCTTGTCCTCAGAACAGGTAGCTaGGGTAGGCGGAGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LNLLFTANCLLLNNGKLVLRTGS*GRRRER
Trigger: TCTTTCTCTCCGCCTACCTCAGCTACCTGTTCTGAG...GACAAGCTTACCATTGTTCAGAAGCAAACAGTTTGCAGTAAAAAGAAGATTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR TCA 90 bp CATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTTGATGGGAGGAATCTGCAGTATTaGGAGACACACGTTTACAAA +
Preference number: 4 (lower is better)
Translates to: HYQTFTPSHSLLRMCFDGRNLQY*ETHVYK
Trigger: TTTGTAAACGTGTGTCTCTCAATACTGCAGATTCCT...CCCATCAAAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GAAGCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGACCCAGAAAGTCATTAATGGGACCAACTaGCATTATATGCTGATTACG +
Preference number: 4 (lower is better)
Translates to: EAILRVLLGKLLIKTQKVINGTN*HYMLIT
Trigger: CGTAATCAGCATATAATGTCAGTTGGTCCCATTAAT...GACTTTCTGGGTCTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR TCA 90 bp GGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGGTATTTTTCACTACTGGCCTACTTaGTTTCCACACGTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: GAFRMKIFWEELTVAGIFHYWPT*FPHVQA
Trigger: AGCTTGCACGTGTGGAAATCAAGTAGGCCAGTAGTG...AAAAATACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp AAATATATATGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGTCGTCCTTGGCCTGCTaGAGCTTATCAGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: KYIWKLNEITVRVTGDSWSSLAC*SLSGLL
Trigger: CAACAAGCCTGATAAGCTGCAGCAGGCCAAGGACGA...CCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCATATATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR GCA 90 bp AGGCAGAGGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCAGTTATATATAAGACTTaGCATCAGAGGGCAAGACTC +
Preference number: 4 (lower is better)
Translates to: RQRAWLSCLWRQSIKSLSVIYKT*HQRARL
Trigger: GAGTCTTGCCCTCTGATGGCAAGTCTTATATATAAC...TGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCCTCTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp GAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTTTACAATTTCTTGTCTCAGGTTaGCTCGCCCCAAACCTTAGC +
Preference number: 4 (lower is better)
Translates to: ERQKKVEESAVLRDTRLQFLVSG*LAPNLS
Trigger: GCTAAGGTTTGGGGCGAGGCAACCTGAGACAAGAAA...TTGTAAACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTATTTTGTCACTGAGTACTTTTCTTGTCTCAGGTTaGCTCGCCCCAAACCTTAGC +
Preference number: 4 (lower is better)
Translates to: CRRQFLFPFLSFILSLSTFLVSG*LAPNLS
Trigger: GCTAAGGTTTGGGGCGAGGCAACCTGAGACAAGAAA...AGTACTCAGTGACAAAATAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TCTTCCTTTGTGCTCCTGTTATTCCTTGTAGAGGCTTCTGGCTCAGTACCCCTAATTGGCTTCAGTTTTTaGAACTGTAAACAGTGCTAT +
Preference number: 4 (lower is better)
Translates to: SSFVLLLFLVEASGSVPLIGFSF*NCKQCY
Trigger: ATAGCACTGTTTACAGTTGCAAAAACTGAAGCCAAT...TAGGGGTACTGAGCCAGAAGCCTCTACAAGGAATAACAGGAGCACAAAGGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GGTGGAGACTGTAAATCACCCAACTTTATCACAAGATGCAGTTATCGGCAGGTGGGATGTAGTTATCTTTaGAGACTGATGTTTACTGAC +
Preference number: 4 (lower is better)
Translates to: GGDCKSPNFITRCSYRQVGCSYL*RLMFTD
Trigger: GTCAGTAAACATCAGTCTCCAAAGATAACTACATCC...CACCTGCCGATAACTGCATCTTGTGATAAAGTTGGGTGATTTACAGTCTCCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AGGATCAGTTATACCGACTGTCAAATCAAATTGATCCTCCTGTTCTTCTTCCTCTGCAAAGAGATCCTGTaGCTCTTGGTCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: RISYTDCQIKLILLFFFLCKEIL*LLVLFF
Trigger: GAAGAACAAGACCAAGAGCCACAGGATCTCTTTGCA...GAGGAAGAAGAACAGGAGGATCAATTTGATTTGACAGTCGGTATAACTGATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559389.1
CDS-3UTR CCA 90 bp GGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCAGACCTTCGCTAGCTCTTTCCTATaGTTGACTAGAGTTTCTACA +
Preference number: 4 (lower is better)
Translates to: GHGFHVYGDKASSHYQTFASSFL*LTRVST
Trigger: TGTAGAAACTCTAGTCAACCATAGGAAAGAGCTAGC...GAAGGTCTGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTATTTTGTCACTGAGTACTAGACTCTTTGCAAACTaGGCTGTGTTCAGCGCTAGC +
Preference number: 4 (lower is better)
Translates to: CRRQFLFPFLSFILSLSTRLFAN*AVFSAS
Trigger: GCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCT...AGTACTCAGTGACAAAATAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTGGTACAGTCACCCTATaGATGCCTTCAAATTACACA +
Preference number: 4 (lower is better)
Translates to: YQYSTPSHNSTTYCRSFAGTVTL*MPSNYT
Trigger: TGTGTAATTTGAAGGCATCCATAGGGTGACTGTACC...AGCAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTATTTTGTCACTGAGTACTTGGTCCATTAGGAGATaGCCTTTGCCTCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: CRRQFLFPFLSFILSLSTWSIRR*PLPQEG
Trigger: TCCTTCCTGAGGCAAAGGCCATCTCCTAATGGACCA...AGTACTCAGTGACAAAATAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTGGTCTCAAATTCTTaGGCTCAAGTGATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: YINTPPHPIIPPPIVGLLLVSNS*AQVILP
Trigger: TGGGAGAATCACTTGAGCCCAAGAATTTGAGACCAG...CAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TTATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTTCCCATCTAGGGCATTaGAAAATGCCTGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: LYQYSTPSHNSTTYCRSFSHLGH*KMPASD
Trigger: GTCTGAAGCAGGCATTTTCCAATGCCCTAGATGGGA...AAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCTTATCATCTTCAAGGATTTaGTTTCTAGAAGTGCCTATG +
Preference number: 4 (lower is better)
Translates to: PFISDQARPCPNMEQRILSSSRI*FLEVPM
Trigger: CATAGGCACTTCTAGAAACCAAATCCTTGAAGATGA...TAAGATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
3UTR CAA 72 bp CTTTCTCAAACCGTATCACTTCTTTTCGGACCACTGTaGAAATCCTCTCGAAGTCCCTTTCATATTGAGTCA +
Preference number: 4 (lower is better)
Translates to: LSQTVSLLFGPL*KSSRSPFHIES
Trigger: TGACTCAATATGAAAGGGACTTCGAGAGGATTTCAACAGTGGTCCGAAAAGAAGTGATACGGTTTGAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR TCA 90 bp GAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTTTACAATTTCCAAGAACTCTCTaGCGTCAGGGTCCTGTAACA +
Preference number: 4 (lower is better)
Translates to: ERQKKVEESAVLRDTRLQFPRTL*RQGPVT
Trigger: TGTTACAGGACCCTGACGTCAGAGAGTTCTTGGAAA...TTGTAAACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp ACCCTATGGATGCCTTCAAATTACACAGCTTTACAGATCAACTTTGTGAAGATATTTCCAAGAACTCTCTaGCGTCAGGGTCCTGTAACA +
Preference number: 4 (lower is better)
Translates to: TLWMPSNYTALQINFVKIFPRTL*RQGPVT
Trigger: TGTTACAGGACCCTGACGTCAGAGAGTTCTTGGAAA...TATCTTCACAAAGTTGATCTGTAAAGCTGTGTAATTTGAAGGCATCCATAGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TGGAGACAAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGCAGCACAAAACTTGTaGACGGTAGAGAAAAACTTA +
Preference number: 4 (lower is better)
Translates to: WRQSIKSLSDLHTFTQSTAAQNL*TVEKNL
Trigger: TAAGTTTTTCTCTACCGTTCACAAGTTTTGTGCTGC...AGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTTGTCTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp AAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGACTGAGGATGTGTTTTaGTGGGTGACAAAAATAGGT +
Preference number: 4 (lower is better)
Translates to: KASSHYQTFTPSHSLLRMTEDVF*WVTKIG
Trigger: ACCTATTTTTGTCACCCATCAAAACACATCCTCAGT...CATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTCTTCACACAGTCTACTaGGGATGTGTTTTGATGGGT +
Preference number: 4 (lower is better)
Translates to: FLATGAFRMKIFWEELTVLHTVY*GCVLMG
Trigger: ACCCATCAAAACACATCCTCAGTAGACTGTGTGAAG...AACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGGTAGGAATCTGCAGTATTaGGAGACACACGTTTACAAA +
Preference number: 4 (lower is better)
Translates to: ATGAFRMKIFWEELTVAGRNLQY*ETHVYK
Trigger: TTTGTAAACGTGTGTCTCTCAATACTGCAGATTCCT...ACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCAGACCTTCAAGACAAAAGAAAGTTaGGGAATCTGCAGTATTGAG +
Preference number: 4 (lower is better)
Translates to: GHGFHVYGDKASSHYQTFKTKES*GICSIE
Trigger: CTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTT...GAAGGTCTGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp ACATATGCATTCATACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAAGTACTCAAAACATaGTGGGAGCAAGCTACAAAC +
Preference number: 4 (lower is better)
Translates to: TYAFIPSPIFSGSVIPTVKVLKT*WEQATN
Trigger: GTTTGTAGCTTGCTCCCATCATGTTTTGAGTACTTT...GACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTATGAATGCATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR TCA 90 bp ATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTAGGGAACATTCAAGATaGGCCTGGAACATCTTGTTA +
Preference number: 4 (lower is better)
Translates to: IKSLSDLHTFTQSTEDVFREHSR*AWNILL
Trigger: TAACAAGATGTTCCAGGCTCATCTTGAATGTTCCCT...AAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGGTCTTAACAAAGCAACCTaGAATCTTTGTCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: ATGAFRMKIFWEELTVAGLNKAT*NLCLSG
Trigger: TCCAGAGAGACAAAGATTTCAGGTTGCTTTGTTAAG...ACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp AATAAACCTACAGGGCTGGTCTCAAAGCATCAGTGTGAATTCATGATTTTTAGTCAGAGGAGGAAGTTCTaGAACCAGAGGAGACATCAT +
Preference number: 4 (lower is better)
Translates to: NKPTGLVSKHQCEFMIFSQRRKF*NQRRHH
Trigger: ATGATGTCTCCTCTGGTTTCAGAACTTCCTCCTCTG...ACTAAAAATCATGAATTCACACTGATGCTTTGAGACCAGCCCTGTAGGTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp GCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGGTAAAGAGAAAGGCTCTTaGTTAATGATAGGGACACCA +
Preference number: 4 (lower is better)
Translates to: ATGAFRMKIFWEELTVAGKEKGS*LMIGTP
Trigger: TGGTGTCCCTATCATTAAGCAAGAGCCTTTCTCTTT...ACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TGGAGACAAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTAACTTTATCACAAGATaGAGTTATCGGCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: WRQSIKSLSDLHTFTQSTNFITR*SYRQVT
Trigger: TGTCACCTGCCGATAACTGCATCTTGTGATAAAGTT...AGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTTGTCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGGAGACAAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGCTAGCTCTTTCCTATaGTTGACTAGAGTTTCTACA +
Preference number: 4 (lower is better)
Translates to: WRQSIKSLSDLHTFTQSTASSFL*LTRVST
Trigger: TGTAGAAACTCTAGTCAACCATAGGAAAGAGCTAGC...AGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTTGTCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTAACAAGCAGCACATTTaGCACCCAGATCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: FLATGAFRMKIFWEELTVNKQHI*HPDLGF
Trigger: GAAACCAAGATCTGGGTGCCAAATGTGCTGCTTGTT...AACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp ACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCAAATTGATCAAAGAGTTAACAACATaGAAAAGGGGGCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: TIPYLLRISYTDCQIKLIKELTT*KRGQTG
Trigger: TCCAGTCTGCCCCCTTTTCCATGTTGTTAACTCTTT...GATCAATTTGATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp CCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCTTAAGAATGAAAATCTTCTaGGAAGAGTTAACAGTTGCT +
Preference number: 4 (lower is better)
Translates to: PFISDQARPCPNMEQRILRMKIF*EELTVA
Trigger: AGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCT...TAAGATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CCA 90 bp CATTTGGCACCCAGATCTTGGTTTCTAAATAACATTCTCTGGCTGGGTATGGTGGATGGACATTTCAATTaGCTTCAGTTTTTGCAACTG +
Preference number: 4 (lower is better)
Translates to: HLAPRSWFLNNILWLGMVDGHFN*LQFLQL
Trigger: CAGTTGCAAAAACTGAAGCCAATTGAAATGTCCATC...CACCATACCCAGCCAGAGAATGTTATTTAGAAACCAAGATCTGGGTGCCAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp ATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTACTGTCAAATCAAATTaGTCCTCCTGTTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: IKSLSDLHTFTQSTEDVFTVKSN*SSCSSS
Trigger: GGAAGAAGAACAGGAGGATCAATTTGATTTGACAGT...AAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGACTGTCAAATCAAATTaGTCCTCCTGTTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: YINTPPHPIIPPPIVGLLTVKSN*SSCSSS
Trigger: GGAAGAAGAACAGGAGGATCAATTTGATTTGACAGT...CAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR TCA 90 bp AGGATCAGTTATACCGACTGTCAAATCAAATTGATCCTCCTGTTCTTCTTCCTCCAAACTGTTTGCTTCTaGACAATGGTAAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: RISYTDCQIKLILLFFFLQTVCF*TMVSLS
Trigger: AGACAAGCTTACCATTGTTCAGAAGCAAACAGTTTG...GAGGAAGAAGAACAGGAGGATCAATTTGATTTGACAGTCGGTATAACTGATCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559389.1
CDS-3UTR TCA 90 bp TTATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTCTTTCCTATGGTTaGCTAGAGTTTCTACAACAG +
Preference number: 4 (lower is better)
Translates to: LYQYSTPSHNSTTYCRSFALSYG*LEFLQQ
Trigger: CTGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGC...AAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR TCA 90 bp ATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTGCAGCACAAAACTTGTaGACGGTAGAGAAAAACTTA +
Preference number: 4 (lower is better)
Translates to: IKSLSDLHTFTQSTEDVFAAQNL*TVEKNL
Trigger: TAAGTTTTTCTCTACCGTTCACAAGTTTTGTGCTGC...AAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GCAACAAACACTTTTACACCTTTTAGACTCAGTTCAAGCATCAGGTTCTCCACAAAAACAAACAACCCCTaGCCAAGAATCCAACAACAA +
Preference number: 4 (lower is better)
Translates to: ATNTFTPFRLSSSIRFSTKTNNP*PRIQQQ
Trigger: TTGTTGTTGGATTCTTGGTCAGGGGTTGTTTGTTTT...TGTGGAGAACCTGATGCTTGAACTGAGTCTAAAAGGTGTAAAAGTGTTTGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp ATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTAGTCTCTGCCTCCTTTaGAGGAGAATAGGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: IKSLSDLHTFTQSTEDVFSLCLL*RRIGFN
Trigger: ATTAAAACCTATTCTCCTGCAAAGGAGGCAGAGACT...AAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TGCATTCATACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCCTTGATTTCCACACGTaGAAGCTCTTTACAAAAATG +
Preference number: 4 (lower is better)
Translates to: CIHTIPYLLRISYTDCQILDFHT*KLFTKM
Trigger: CATTTTTGTAAAGAGCTTGCACGTGTGGAAATCAAG...GATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTATGAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR GCA 90 bp CATACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCAAATTGAACTTTATCACAAGATaGAGTTATCGGCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: HTIPYLLRISYTDCQIKLNFITR*SYRQVT
Trigger: TGTCACCTGCCGATAACTGCATCTTGTGATAAAGTT...CAATTTGATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp ACATATGCATTCATACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCGGATGTAGTTATCTTTaGAGACTGATGTTTACTGAC +
Preference number: 4 (lower is better)
Translates to: TYAFIPSPIFSGSVIPTVGCSYL*RLMFTD
Trigger: GTCAGTAAACATCAGTCTCCAAAGATAACTACATCC...GACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTATGAATGCATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559389.1
CDS-3UTR CCA 90 bp AATTCTCTTCTTCTCTTAGAAGAGAATGTCCTGTTCTTAGGGAAATGCATACTGAGATCCTGTGGCTCTTaGTCTTGTTCTTCATGGATC +
Preference number: 4 (lower is better)
Translates to: NSLLLLEENVLFLGKCILRSCGS*SCSSWI
Trigger: GATCCATGAAGAACAAGACCAAGAGCCACAGGATCT...CAGTATGCATTTCCCTAAGAACAGGACATTCTCTTCTAAGAGAAGAAGAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AGTTGCTGGTATTTTTGTGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTAAGATCCTGTGGCTCTTaGTCTTGTTCTTCATGGATC +
Preference number: 4 (lower is better)
Translates to: SCWYFCVGDNSYSRFSHLRSCGS*SCSSWI
Trigger: GATCCATGAAGAACAAGACCAAGAGCCACAGGATCT...TAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACACAAAAATACCAGCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp ACCCTATGGATGCCTTCAAATTACACAGCTTTACAGATCAACTTTGTGAAGATATGCAAAGAGATCCTGTaGCTCTTGGTCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: TLWMPSNYTALQINFVKICKEIL*LLVLFF
Trigger: GAAGAACAAGACCAAGAGCCACAGGATCTCTTTGCA...TATCTTCACAAAGTTGATCTGTAAAGCTGTGTAATTTGAAGGCATCCATAGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp GGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCAGACCTTCGATGAATCAAAATTATaGTACAGTCACCCTATGGAT +
Preference number: 4 (lower is better)
Translates to: GHGFHVYGDKASSHYQTFDESKL*YSHPMD
Trigger: ATCCATAGGGTGACTGTACCATAATTTTGATTCATC...GAAGGTCTGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CATTTGGCACCCAGATCTTGGTTTCTAAATAACATTCTCTGGCTGGGTATGGTGAAATCTTTGTCTCTCTaGAGGAAAGAGTTAACAACA +
Preference number: 4 (lower is better)
Translates to: HLAPRSWFLNNILWLGMVKSLSL*RKELTT
Trigger: TGTTGTTAACTCTTTCCTCCAGAGAGACAAAGATTT...CACCATACCCAGCCAGAGAATGTTATTTAGAAACCAAGATCTGGGTGCCAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTTGATGGGAGAATGAAAATCTTCTaGGAAGAGTTAACAGTTGCT +
Preference number: 4 (lower is better)
Translates to: HYQTFTPSHSLLRMCFDGRMKIF*EELTVA
Trigger: AGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCT...CCCATCAAAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTTCCATACCTTTTATCTaGGCAACTTCTTGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: LATGAFRMKIFWEELTVASIPFI*ATSWLG
Trigger: TCCTAACCAAGAAGTTGCCCAGATAAAAGGTATGGA...AGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560861.1
3UTR CAA 72 bp AAGCATATAATAAAGACTGGAAGGATAAAACCAAAGTaGATGGTAAGGATACTGAGGGGTAGGGAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: KHIIKTGRIKPK*MVRILRGRESD
Trigger: GTCACTCTCCCTACCCCTCAGTATCCTTACCATCAACTTTGGTTTTATCCTTCCAGTCTTTATTATATGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCAAATTGATACTGTCAAATCAAATTaGTCCTCCTGTTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: YHPLSSQDQLYRLSNQIDTVKSN*SSCSSS
Trigger: GGAAGAAGAACAGGAGGATCAATTTGATTTGACAGT...ATCAATTTGATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559389.1
CDS-3UTR TCA 90 bp AGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGGTATTTTCACCAACCTAAGCGGTaGACAGAGTTAACAACATTA +
Preference number: 4 (lower is better)
Translates to: RSIQNENLLGRVNSCWYFHQPKR*TELTTL
Trigger: TAATGTTGTTAACTCTGTTCACCGCTTAGGTTGGTG...AAAATACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTTTACAATTTAATTATCAAGCATaGAACTTCCCCTCTTCGGCC +
Preference number: 4 (lower is better)
Translates to: ERQKKVEESAVLRDTRLQFNYQA*NFPSSA
Trigger: GGCCGAAGAGGGGAAGTTTCATGCTTGATAATTAAA...TTGTAAACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp GAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTTTACAACAGGAGCATTCAGAATaGAAATCTTCTGGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: ERQKKVEESAVLRDTRLQQEHSE*KSSGKS
Trigger: ACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTG...TTGTAAACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp ATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTTTTGTAGGCTACATATaGATTCATACCATCCCCTAT +
Preference number: 4 (lower is better)
Translates to: IKSLSDLHTFTQSTEDVFFVGYI*IHTIPY
Trigger: ATAGGGGATGGTATGAATGCATATGTAGCCTACAAA...AAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGGAGACAAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGATGAATCAAAATTATaGTACAGTCACCCTATGGAT +
Preference number: 4 (lower is better)
Translates to: WRQSIKSLSDLHTFTQSTDESKL*YSHPMD
Trigger: ATCCATAGGGTGACTGTACCATAATTTTGATTCATC...AGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTTGTCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp ACCCTATGGATGCCTTCAAATTACACAGCTTTACAGATCAACTTTGTGAAGATAAGGAATCTGCAGTATTaGGAGACACACGTTTACAAA +
Preference number: 4 (lower is better)
Translates to: TLWMPSNYTALQINFVKIRNLQY*ETHVYK
Trigger: TTTGTAAACGTGTGTCTCTCAATACTGCAGATTCCT...TATCTTCACAAAGTTGATCTGTAAAGCTGTGTAATTTGAAGGCATCCATAGGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR TCA 90 bp TTATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTAAGACAAAAGAAAGTTaGGGAATCTGCAGTATTGAG +
Preference number: 4 (lower is better)
Translates to: LYQYSTPSHNSTTYCRSFKTKES*GICSIE
Trigger: CTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTT...AAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp TTATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTTTTGTAGGCTACATATaGATTCATACCATCCCCTAT +
Preference number: 4 (lower is better)
Translates to: LYQYSTPSHNSTTYCRSFFVGYI*IHTIPY
Trigger: ATAGGGGATGGTATGAATGCATATGTAGCCTACAAA...AAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATAA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR GCA 90 bp AACAATCATTCAACAGTTATCTATTTGACACCTGTTTTGAGCCTGAACCTTTGCGGAAGAGTTAACAGTTaGTGGTATTTTTGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: NNHSTVIYLTPVLSLNLCGRVNS*WYFCVG
Trigger: GCCTACACAAAAATACCAGCAACTGTTAACTCTTCC...GCAAAGGTTCAGGCTCAAAACAGGTGTCAAATAGATAACTGTTGAATGATTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR GCA 90 bp AGGATCAGTTATACCGACTGTCAAATCAAATTGATCCTCCTGTTCTTCTTCCTCATTGGCTTCAGTTTTTaGAACTGTAAACAGTGCTAT +
Preference number: 4 (lower is better)
Translates to: RISYTDCQIKLILLFFFLIGFSF*NCKQCY
Trigger: ATAGCACTGTTTACAGTTGCAAAAACTGAAGCCAAT...GAGGAAGAAGAACAGGAGGATCAATTTGATTTGACAGTCGGTATAACTGATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp AGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGGTATTTTAGAGTTAACAGTTGCTaGTATTTTTGTGTAGGCGAC +
Preference number: 4 (lower is better)
Translates to: RSIQNENLLGRVNSCWYFRVNSC*YFCVGD
Trigger: GTCGCCTACACAAAAATACCAGCAACTGTTAACTCT...AAAATACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CCA 90 bp TTATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGGATGTAGTTATCTTTaGAGACTGATGTTTACTCTG +
Preference number: 4 (lower is better)
Translates to: LYQYSTPSHNSTTYCRSFGCSYL*RLMFTL
Trigger: CAGAGTAAACATCAGTCTCCAAAGATAACTACATCC...AAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560829.5
CDS-3UTR GCA 90 bp AAATATATATGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGAGTCTCTGCCTCCTTTaGAGGAGAATAGGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: KYIWKLNEITVRVTGDSWSLCLL*RRIGFN
Trigger: ATTAAAACCTATTCTCCTGCAAAGGAGGCAGAGACT...CCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCATATATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp AATAAACCTACAGGGCTGGTCTCAAAGCATCAGTGTGAATTCATGATTTTTAGTGGATGTAGTTATCTTTaGAGACTGATGTTTACTGAC +
Preference number: 4 (lower is better)
Translates to: NKPTGLVSKHQCEFMIFSGCSYL*RLMFTD
Trigger: GTCAGTAAACATCAGTCTCCAAAGATAACTACATCC...ACTAAAAATCATGAATTCACACTGATGCTTTGAGACCAGCCCTGTAGGTTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp TGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTATTTTGTCACTGAGTACTAAAACTTACTATACCTaGGCAACTTCTTGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: CRRQFLFPFLSFILSLSTKTYYT*ATSWLG
Trigger: TCCTAACCAAGAAGTTGCCCAGGTATAGTAAGTTTT...AGTACTCAGTGACAAAATAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CCA 90 bp CTAAATCTTCTTTTTACTGCAAACTGTTTGCTTCTGAACAATGGTAAGCTTGTCTGGCTTTCATGTCTATaGAGACAAAGCATCAAGTCA +
Preference number: 4 (lower is better)
Translates to: LNLLFTANCLLLNNGKLVWLSCL*RQSIKS
Trigger: TGACTTGATGCTTTGTCTCCATAGACATGAAAGCCA...GACAAGCTTACCATTGTTCAGAAGCAAACAGTTTGCAGTAAAAAGAAGATTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CCA 90 bp TTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTAGAATGAAAATCTTCTaGGAAGAGTTAACAGTTGCT +
Preference number: 4 (lower is better)
Translates to: FLATGAFRMKIFWEELTVRMKIF*EELTVA
Trigger: AGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCT...AACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS GCA 90 bp CGAGCCTCGGCCTCCCGCTTCTTCTGCAGTGTGGCTTGGGCATCCTaGCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: RASASRFFCSVAWAS*QRCHVFMRWSKAAC
Trigger: ACAGGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGCCGAGGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559961.1
CDS-3UTR CAA 90 bp CCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGCGGACTATGGCCAGCTTCTGCAGTGTGGCTaGGGCATCCTGCCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: PALPCLHALVEGSADYGQLLQCG*GILPAL
Trigger: CAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAG...CTGGCCATAGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CAA 90 bp GGGCTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGGTGGCAGGAGCGTCTTaGGGATGGAGGGGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: GLDVLEVYGLPVGPECARVAGAS*GWRGWR
Trigger: CCTCCAGCCCCTCCATCCCAAAGACGCTCCTGCCAC...CCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGGCTCTTGCTGGCAGGCTCTTCTGCAGTGTGGCTaGGGCATCCTGCCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: CEHPLAVCATPEGSCWQALLQCG*GILPAL
Trigger: CAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAG...AGCCTGCCAGCAAGAGCCCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CTCAGTGGACTCACCTCGAGGATCTCGTCCTTGGCCTGCTGCAGCTTATCAGGCAGCTTATCAGGCTTGTaGGCCCACAGCAGCCGAGCC +
Preference number: 5 (lower is better)
Translates to: LSGLTSRISSLACCSLSGSLSGL*AHSSRA
Trigger: GGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGCT...GCCTGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGGTGAGTCCACTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CAA 90 bp CAAACCTCTGGGTGGGATGGGCCCTGGGTTCATTTGGAACCAGCAGAACACCCCGGGCCCTGGGTTCATTaGGAACCAGCAGAACACCCC +
Preference number: 5 (lower is better)
Translates to: QTSGWDGPWVHLEPAEHPGPWVH*EPAEHP
Trigger: GGGGTGTTCTGCTGGTTCCAAATGAACCCAGGGCCC...GGGGTGTTCTGCTGGTTCCAAATGAACCCAGGGCCCATCCCACCCAGAGGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CAA 90 bp CAGGCCTCGAGGTCTGGAAGGGAGGTGGCCCTGCCTCATATGCTAGCTGTCCCCTGGGGAAAGAATGTCTaGCAGGGGTCAGAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: QASRSGREVALPHMLAVPWGKNV*QGSEKL
Trigger: GAGCTTCTCTGACCCCTGCAAGACATTCTTTCCCCA...GGGGACAGCTAGCATATGAGGCAGGGCCACCTCCCTTCCAGACCTCGAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR CAA 90 bp GCTTGGGCATCCTGCCAGCGCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGGCTTTGTTGAACATCTaGAGGAGACCAGCACCACTC +
Preference number: 5 (lower is better)
Translates to: AWASCQRCHVFMRWSKAAALLNI*RRPAPL
Trigger: GAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGC...CGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCCCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CAA 90 bp GCTGCCATGTCTTCATGCGCTGGTCGAAGGCAGCGCGGACTATGGCCAGGAGGCGCATGGCTAGACTCTTaGCAAACTGGGCTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: AAMSSCAGRRQRGLWPGGAWLDS*QTGLCS
Trigger: TGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGC...GCCTCCTGGCCATAGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CAA 90 bp GCTGGTCGAAGGCAGCGCGGACTATGGCCAGGAGGCGAATGTAGTCACTCAGGATCGAGGATCTCGTCCTaGGCCTGCTGCAGCTTATCA +
Preference number: 5 (lower is better)
Translates to: AGRRQRGLWPGGECSHSGSRISS*ACCSLS
Trigger: TGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGA...TCCTGAGTGACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCTTCGACCAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CAA 90 bp TCTGGAAGGGAGGTGGCCCTGCCTCATATGCTAGCTGTCCCCAGGGTGCTGGCGCTGTGGCTCTTGGTCTaGTTCTTCATGGATCCCATT +
Preference number: 5 (lower is better)
Translates to: SGREVALPHMLAVPRVLALWLLV*FFMDPI
Trigger: AATGGGATCCATGAAGAACAAGACCAAGAGCCACAG...CGCCAGCACCCTGGGGACAGCTAGCATATGAGGCAGGGCCACCTCCCTTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR CAA 90 bp GGGCTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGGGGGCTTCGAAGAATTaGTGGCTTCCTGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: GLDVLEVYGLPVGPECARGASKN*WLPEEE
Trigger: TTCCTCCTCAGGAAGCCACAAATTCTTCGAAGCCCC...CCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAGCCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000559844.6
CDS-3UTR CAA 90 bp CTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAGGTTCCATACCTTTTGTCTGGGCCAGAAGCTaGCGGGGCATCCTAGCTACC +
Preference number: 5 (lower is better)
Translates to: LRSPNAELAKGKAGSIPFVWARS*RGILAT
Trigger: GGTAGCTAGGATGCCCCGCAAGCTTCTGGCCCAGAC...AAAAGGTATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GGGCTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGGCTTTGTTGAACATCTaGAGGAGACCAGCACCACTC +
Preference number: 5 (lower is better)
Translates to: GLDVLEVYGLPVGPECARALLNI*RRPAPL
Trigger: GAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGC...CCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GACCAGCACCACTCAATGTCTGGGTACCCACGGCACGTGGCAGCTACAAGACCAAGGAAGAAGTCATTGTaGGCCTGTTCCTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: DQHHSMSGYPRHVAATRPRKKSL*ACSWWS
Trigger: GCTCCACCAGGAACAGGCCAACAATGACTTCTTCCT...TGGTCTTGTAGCTGCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CAA 90 bp TGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTTGCAAACTGGGCTGTGTTCACTTCTGCAGTGTGGCTaGGGCATCCTGCCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: CPQSSQAWLDSLQTGLCSLLQCG*GILPAL
Trigger: CAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAG...TGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CAA 90 bp ACGCCCTCCATCACCACACACTCTCCAGCCACATCTTGGCCCCATCCTGAGATTTCGAGGATCTCGTCCTaGGCCTGCTGCAGCTTATCA +
Preference number: 5 (lower is better)
Translates to: TPSITTHSPATSWPHPEISRISS*ACCSLS
Trigger: TGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGA...AATCTCAGGATGGGGCCAAGATGTGGCTGGAGAGTGTGTGGTGATGGAGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGGGTTCGAGGATCTCGTCCTaGGCCTGCTGCAGCTTATCA +
Preference number: 5 (lower is better)
Translates to: GGGGQCIKRQRHTGGLWGSRISS*ACCSLS
Trigger: TGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGA...ACCCCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp ACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGGGGGGAAGCCCATCCTaGACTGACGAGACTCTGGCC +
Preference number: 5 (lower is better)
Translates to: TGPSPGAASVYRESECLLGGSPS*TDETLA
Trigger: GGCCAGAGTCTCGTCAGTCAAGGATGGGCTTCCCCC...CAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GTACAGGGAATCAGAATGTTTACTGCGTTTTCTTGTCTCAGGTTGCCTCGCCCCGTGGCAGGAGCGTCTTaGGGATGGAGGGGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: VQGIRMFTAFSCLRLPRPVAGAS*GWRGWR
Trigger: CCTCCAGCCCCTCCATCCCAAAGACGCTCCTGCCAC...GGGGCGAGGCAACCTGAGACAAGAAAACGCAGTAAACATTCTGATTCCCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GGGCTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGTTACAAAGGGTTTCATaGTCTGCCCAGTGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: GLDVLEVYGLPVGPECARLQRVS*SAQCLG
Trigger: GCCCAGACACTGGGCAGACAATGAAACCCTTTGTAA...CCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp ACGCCCTCCATCACCACACACTCTCCAGCCACATCTTGGCCCCATCCTGAGATTTGGGGCTTGATGTCCTaGAAGTCTATGGGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: TPSITTHSPATSWPHPEIWGLMS*KSMGFP
Trigger: CGGGAAGCCCATAGACTTCAAGGACATCAAGCCCCA...AATCTCAGGATGGGGCCAAGATGTGGCTGGAGAGTGTGTGGTGATGGAGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS CCA 90 bp AGAGTGCCCGTGACAATGCCGTGTTGTCCTCAGAGCTCCCAAGCATaGCTAGACTCTTTGCAAACTGGGCTGTGTTCAGCGCTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: RVPVTMPCCPQSSQA*LDSLQTGLCSALAL
Trigger: CAGAGCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACACGGCATTGTCACGGGCACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559401.1
CDS-3UTR CAA 90 bp CTGCCTCATATGCTAGCTGTCCCCAGGGTGCTGGCGGTGGCTTCTCAGCAAGTGGAGATCCTGTGGCTCTaGGTCTTGTTCTTCATGGAT +
Preference number: 5 (lower is better)
Translates to: LPHMLAVPRVLAVASQQVEILWL*VLFFMD
Trigger: ATCCATGAAGAACAAGACCAAGAGCCACAGGATCTC...CACTTGCTGAGAAGCCACCGCCAGCACCCTGGGGACAGCTAGCATATGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR CAA 90 bp GGCTTCCTCAGCAGCCACGGCCCTTTAGACTCAATCAGCGCTCTTCCCCCTGTGGAGATCCTGTGGCTCTaGGTCTTGTTCTTCATGGAT +
Preference number: 5 (lower is better)
Translates to: GFLSSHGPLDSISALPPVEILWL*VLFFMD
Trigger: ATCCATGAAGAACAAGACCAAGAGCCACAGGATCTC...CACAGGGGGAAGAGCGCTGATTGAGTCTAAAGGGCCGTGGCTGCTGAGGAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CAA 90 bp AGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAAAACTTCTGCAGTGTGGCTaGGGCATCCTGCCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: RQDASLGVHQGGGGQCIKLLQCG*GILPAL
Trigger: CAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAG...TTTTATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp ACATTTGCAATCAGTTTCCATGAGGTGTCGGCGCTGTTGGGAAGGACTGGGAGAAGCTTATCAGGCTTGTaGGCCCACAGCAGCCGAGCC +
Preference number: 5 (lower is better)
Translates to: TFAISFHEVSALLGRTGRSLSGL*AHSSRA
Trigger: GGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGCT...TCTCCCAGTCCTTCCCAACAGCGCCGACACCTCATGGAAACTGATTGCAAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CTTGCACCACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATTCGAGGATCTCGTCCTaGGCCTGCTGCAGCTTATCA +
Preference number: 5 (lower is better)
Translates to: LAPLALPLVLHLCTGNQNSRISS*ACCSLS
Trigger: TGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGA...ATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CTGGGATCACACCAGCTCGAAGTCCAGTCCTCATCTTCAGCACTCCGGAGCCCACTTTTCGGACCACTGTaGAAATCCTCTCGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: LGSHQLEVQSSSSALRSPLFGPL*KSSRSP
Trigger: GGGACTTCGAGAGGATTTCAACAGTGGTCCGAAAAG...TGGGCTCCGGAGTGCTGAAGATGAGGACTGGACTTCGAGCTGGTGTGATCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CAA 90 bp GGGCTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGGACAGTAGAGCTTCTTaGAACCTCCTAAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: GLDVLEVYGLPVGPECARDSRAS*NLLRFR
Trigger: CCTGAACCTTAGGAGGTTCAAAGAAGCTCTACTGTC...CCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp ACGCCCTCCATCACCACACACTCTCCAGCCACATCTTGGCCCCATCCTGAGATTTCTGACCAGTATAGCTaGAGCAGCTGTGGACACAGC +
Preference number: 5 (lower is better)
Translates to: TPSITTHSPATSWPHPEISDQYS*SSCGHS
Trigger: GCTGTGTCCACAGCTGCTCAAGCTATACTGGTCAGA...AATCTCAGGATGGGGCCAAGATGTGGCTGGAGAGTGTGTGGTGATGGAGGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CTGCCTCATATGCTAGCTGTCCCCAGGGTGCTGGCGGTGGCTTCTCAGCAAGTGGAAACAAAGACACACTaGGGTCCCTCAAGTAACAGG +
Preference number: 5 (lower is better)
Translates to: LPHMLAVPRVLAVASQQVETKTH*GPSSNR
Trigger: CCTGTTACTTGAGGGACCCAAGTGTGTCTTTGTTTC...CACTTGCTGAGAAGCCACCGCCAGCACCCTGGGGACAGCTAGCATATGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS TCA 90 bp GCTCGAAGTCCAGTCCTCATCTTCAGCACTCCGGAGCCCAAACGCTaGACTAGCCAAGGGGAAAGCAGGTTCCATACCTTTTATCTGGGC +
Preference number: 5 (lower is better)
Translates to: ARSPVLIFSTPEPKR*TSQGESRFHTFYLG
Trigger: GCCCAGATAAAAGGTATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGAAGATGAGGACTGGACTTCGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560861.1
CDS-3UTR CAA 90 bp GACCAGCACCACTCAATGTCTGGGTACCCACGGCACGTGGCAGCTACAAGACCAACGGCATCTGTGGCTTaGTTGAACATCTTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: DQHHSMSGYPRHVAATRPTASVA*LNILRR
Trigger: TCTCCTCAAGATGTTCAACAAAGCCACAGATGCCGT...TGGTCTTGTAGCTGCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CAA 90 bp GACCAGCACCACTCAATGTCTGGGTACCCACGGCACGTGGCAGCTACAAGACCAATCTTGATGGTCATTTaGCTGACGGCATCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: DQHHSMSGYPRHVAATRPILMVI*LTASVA
Trigger: AGCCACAGATGCCGTCAGCAAAATGACCATCAAGAT...TGGTCTTGTAGCTGCCACGTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560260.5
CDS-3UTR CAA 90 bp CAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGAGGAAGAAGTCATTGTaGGCCTGTTCCTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: QGGGGQCIKRQRHTGGLWRKKSL*ACSWWS
Trigger: GCTCCACCAGGAACAGGCCAACAATGACTTCTTCCT...CCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp AGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGAGGAGGAAGAAGTCATaGTTGGCCTGTTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: RPAEICVNTLWLCVQLLRRRKKS*LACSWW
Trigger: CCACCAGGAACAGGCCAACAATGACTTCTTCCTCCT...CCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GGGCTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGAGTGTCTCAAGGTACTaGATCACGTGGTTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: GLDVLEVYGLPVGPECARSVSRY*ITWFLK
Trigger: CTTCAAGAACCACGTGATCAAGTACCTTGAGACACT...CCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CAA 90 bp CAGGCATGTGCGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCTGACCAGTATAGCTaGAGCAGCTGTGGACACAGC +
Preference number: 5 (lower is better)
Translates to: QACAHCSTDVSSYVWSQGSDQYS*SSCGHS
Trigger: GCTGTGTCCACAGCTGCTCAAGCTATACTGGTCAGA...TCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCGCACATGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGGTTTACTGCGTTTTCTaGTCTCAGGTTGCCTCGCCC +
Preference number: 5 (lower is better)
Translates to: RPAEICVNTLWLCVQLLRVYCVF*SQVASP
Trigger: GGGCGAGGCAACCTGAGACAAGAAAACGCAGTAAAC...CCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAGGGGCTTCGAAGAATTaGTGGCTTCCTGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: PRQDASLGVHQGGGGQCIGASKN*WLPEEE
Trigger: TTCCTCCTCAGGAAGCCACAAATTCTTCGAAGCCCC...TATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp GGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGGGTACGGCATCTGTGGCTTaGTTGAACATCTTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: GGGGQCIKRQRHTGGLWGTASVA*LNILRR
Trigger: TCTCCTCAAGATGTTCAACAAAGCCACAGATGCCGT...ACCCCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp ACGCCCTCCATCACCACACACTCTCCAGCCACATCTTGGCCCCATCCTGAGATTACGGCATCTGTGGCTTaGTTGAACATCTTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: TPSITTHSPATSWPHPEITASVA*LNILRR
Trigger: TCTCCTCAAGATGTTCAACAAAGCCACAGATGCCGT...AATCTCAGGATGGGGCCAAGATGTGGCTGGAGAGTGTGTGGTGATGGAGGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGGCATGGCTAGACTCTTaGCAAACTGGGCTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: RPAEICVNTLWLCVQLLRAWLDS*QTGLCS
Trigger: TGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGC...CCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp ATGGCTAGACTCTTTGCAAACTGGGCTGTGTTCAGCGCTAGCTCTTTCCTATGGCGTGACAATGCCGTGTaGTCCTCAGAGCTCCCAAGC +
Preference number: 5 (lower is better)
Translates to: MARLFANWAVFSASSFLWRDNAV*SSELPS
Trigger: GCTTGGGAGCTCTGAGGACAACACGGCATTGTCACG...CCATAGGAAAGAGCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCTAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CAA 90 bp GTGTTGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTTGCAAACTGGGCTGTGAGGAGGAAGAAGTCATaGTTGGCCTGTTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: VLSSELPSMARLFANWAVRRKKS*LACSWW
Trigger: CCACCAGGAACAGGCCAACAATGACTTCTTCCTCCT...CACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CAA 90 bp GGTCCATCAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGAGGAGGAAGAAGTCATaGTTGGCCTGTTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: GPSRWRRTVYKKAASHRWRRKKS*LACSWW
Trigger: CCACCAGGAACAGGCCAACAATGACTTCTTCCTCCT...CCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTGATGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp ATGGCTAGACTCTTTGCAAACTGGGCTGTGTTCAGCGCTAGCTCTTTCCTATGGTGCAGCTTATCAGGCTaGTTGGCCCACAGCAGCCGA +
Preference number: 5 (lower is better)
Translates to: MARLFANWAVFSASSFLWCSLSG*LAHSSR
Trigger: TCGGCTGCTGTGGGCCAACAAGCCTGATAAGCTGCA...CCATAGGAAAGAGCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCTAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CAA 90 bp AGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGCTTTTCGGACCACTGTaGAAATCCTCTCGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: RPAEICVNTLWLCVQLLRLFGPL*KSSRSP
Trigger: GGGACTTCGAGAGGATTTCAACAGTGGTCCGAAAAG...CCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGCTTTTCGGACCACTGTaGAAATCCTCTCGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: QGGGGQCIKRQRHTGGLWLFGPL*KSSRSP
Trigger: GGGACTTCGAGAGGATTTCAACAGTGGTCCGAAAAG...CCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp AAAAGACACGCCCTCCATCACCACACACTCTCCAGCCACATCTTGGCCCCATCCTACCTGGGCAACTTCTaGGTTAGGAGTATTCCAGAC +
Preference number: 5 (lower is better)
Translates to: KRHALHHHTLSSHILAPSYLGNF*VRSIPD
Trigger: GTCTGGAATACTCCTAACCAAGAAGTTGCCCAGGTA...GGATGGGGCCAAGATGTGGCTGGAGAGTGTGTGGTGATGGAGGGCGTGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CTGGGATCACACCAGCTCGAAGTCCAGTCCTCATCTTCAGCACTCCGGAGCCCAGGAATACGAAACAGATaGAGACCCTCAGAACAGGTA +
Preference number: 5 (lower is better)
Translates to: LGSHQLEVQSSSSALRSPGIRNR*RPSEQV
Trigger: TACCTGTTCTGAGGGTCTCAATCTGTTTCGTATTCC...TGGGCTCCGGAGTGCTGAAGATGAGGACTGGACTTCGAGCTGGTGTGATCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp ATCCAGGCATGTGCGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGCCACTACTGGCCTACTaGATTTCCACACGTGCAAGC +
Preference number: 5 (lower is better)
Translates to: IQACAHCSTDVSSYVWSQPLLAY*ISTRAS
Trigger: GCTTGCACGTGTGGAAATCAAGTAGGCCAGTAGTGG...CTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCGCACATGCCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GGTGGAGACTGTAAATCACCCAACTTTATCACAAGATGCAGTTATCGGCAGGTGGTCTGGGCCAGAAGCTaGCGGGGCATCCTAGCTACC +
Preference number: 5 (lower is better)
Translates to: GGDCKSPNFITRCSYRQVVWARS*RGILAT
Trigger: GGTAGCTAGGATGCCCCGCAAGCTTCTGGCCCAGAC...CACCTGCCGATAACTGCATCTTGTGATAAAGTTGGGTGATTTACAGTCTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATTGGGGCTTGATGTCCTaGAAGTCTATGGGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: RTVAQMCPPMFGARDPHYWGLMS*KSMGFP
Trigger: CGGGAAGCCCATAGACTTCAAGGACATCAAGCCCCA...ATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS GCA 90 bp GGCTGTCAGCGGATCCCGCGGAGAAATAATTGTAAAGAGTCTCCGTaGTGGAGAACTCAAGATCTCCTTTCCCCTACCCCTTCAGGATTC +
Preference number: 5 (lower is better)
Translates to: GCQRIPRRNNCKESP*WRTQDLLSPTPSGF
Trigger: GAATCCTGAAGGGGTAGGGGAAAGGAGATCTTGAGTTCTCCAGCACGGAGACTCTTTACAATTATTTCTCCGCGGGATCCGCTGACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560829.5
CDS CCA 90 bp GGTCAGAGAAGCTCCAATGCTTACCAGGTCAGGTGGGTATCCAAATaGGACTTGTCCTTAACAGGCCTACTGTGTGGATGCCTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: GQRSSNAYQVRWVSK*DLSLTGLLCGCLQV
Trigger: GACCTGAAGGCATCCACACAGTAGGCCTGTTAAGGACAAGTCCCATTTGGATACCCACCTGACCTGGTAAGCATTGGAGCTTCTCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS-3UTR CAA 90 bp CAGGCATGTGCGCACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGAGAGATCCTGTGGCTCTaGGTCTTGTTCTTCATGGAT +
Preference number: 5 (lower is better)
Translates to: QACAHCSTDVSSYVWSQGEILWL*VLFFMD
Trigger: ATCCATGAAGAACAAGACCAAGAGCCACAGGATCTC...TCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTGCGCACATGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GGCCTCCCCTCCACCTACAGATTCTTTCCTGTGGCCTCAGCAGTGAGGCACCCTGACTGTCAAATCAAATaGATCCTCCTGTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GLPSTYRFFPVASAVRHPDCQIK*ILLFFF
Trigger: GAAGAAGAACAGGAGGATCAATTTGATTTGACAGTC...AGGGTGCCTCACTGCTGAGGCCACAGGAAAGAATCTGTAGGTGGAGGGGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGATCTTGATGGTCATTTaGCTGACGGCATCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: QGGGGQCIKRQRHTGGLWILMVI*LTASVA
Trigger: AGCCACAGATGCCGTCAGCAAAATGACCATCAAGAT...CCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp TCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGACGTGACAATGCCGTGTaGTCCTCAGAGCTCCCAAGC +
Preference number: 5 (lower is better)
Translates to: SCPFISDQARPCPNMEQRRDNAV*SSELPS
Trigger: GCTTGGGAGCTCTGAGGACAACACGGCATTGTCACG...TCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCTTAAGCTTATCAGGCTTGTaGGCCCACAGCAGCCGAGCC +
Preference number: 5 (lower is better)
Translates to: PFISDQARPCPNMEQRILSLSGL*AHSSRA
Trigger: GGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGCT...TAAGATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAGAAGTCCCTTTCATATaGAGTCACCCGAGACTCCCA +
Preference number: 5 (lower is better)
Translates to: PRQDASLGVHQGGGGQCIEVPFI*SHPRLP
Trigger: TGGGAGTCTCGGGTGACTCAATATGAAAGGGACTTC...TATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp TCCTCATCTTCAGCACTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAGTTAAAAAGAAATACTaGCACCACTGGCCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: SSSSALRSPNAELAKGKAVKKKY*HHWPFP
Trigger: GGGGAAGGGCCAGTGGTGCAAGTATTTCTTTTTAAC...TGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGAAGATGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS CCA 90 bp ATGTCTTGCAGGGGTCAGAGAAGCTCCAATGCTTACCAGGTCAGGTaGGTATCCAAATGGGACTTGTCCTTAACAGGCCTACTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: MSCRGQRSSNAYQVR*VSKWDLSLTGLLCG
Trigger: TCCACACAGTAGGCCTGTTAAGGACAAGTCCCATTTGGATACCCACCTGACCTGGTAAGCATTGGAGCTTCTCTGACCCCTGCAAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS CCA 90 bp CATGTTAGTGCCCAGCTGGGAAGTTTAATGTCTAGGAGCAAAGCTTaGGTAAGACTCCTCTCCAAGCTTCCAGAAGGCCAGTGCCATGCT +
Preference number: 5 (lower is better)
Translates to: HVSAQLGSLMSRSKA*VRLLSKLPEGQCHA
Trigger: AGCATGGCACTGGCCTTCTGGAAGCTTGGAGAGGAGTCTTACCCAAGCTTTGCTCCTAGACATTAAACTTCCCAGCTGGGCACTAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559961.1
CDS-3UTR CAA 90 bp CTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCCTGTGGCTCTTGGTCTaGTTCTTCATGGATCCCATT +
Preference number: 5 (lower is better)
Translates to: LALPLVLHLCTGNQNVYCLWLLV*FFMDPI
Trigger: AATGGGATCCATGAAGAACAAGACCAAGAGCCACAG...GCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TTTTGTGTGCTGTCCAAGGATAGCTCCACTGTGGCATCTGTGGTCCTAGCTACTCTAGCTCCTCATAGGTaGGCTGGGGCTTCGAAGAAT +
Preference number: 5 (lower is better)
Translates to: FCVLSKDSSTVASVVLATLAPHR*AGASKN
Trigger: ATTCTTCGAAGCCCCAGCCAACCTATGAGGAGCTAG...AGTAGCTAGGACCACAGATGCCACAGTGGAGCTATCCTTGGACAGCACACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559389.1
CDS-3UTR CAA 90 bp AGGAGCTTCAAAGCCCACTCTGACCAGTATAGCTTGAGCAGCTGTGGACACAGCGCATCTGTGGCTTTGTaGAACATCTTGAGGAGACCA +
Preference number: 5 (lower is better)
Translates to: RSFKAHSDQYSLSSCGHSASVAL*NILRRP
Trigger: TGGTCTCCTCAAGATGTTCAACAAAGCCACAGATGC...GCTGTGTCCACAGCTGCTCAAGCTATACTGGTCAGAGTGGGCTTTGAAGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCACGGCATCTGTGGCTTaGTTGAACATCTTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LALPLVLHLCTGNQNVYCTASVA*LNILRR
Trigger: TCTCCTCAAGATGTTCAACAAAGCCACAGATGCCGT...GCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GGTCCATCAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGACGGCATCTGTGGCTTaGTTGAACATCTTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: GPSRWRRTVYKKAASHRWTASVA*LNILRR
Trigger: TCTCCTCAAGATGTTCAACAAAGCCACAGATGCCGT...CCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTGATGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp CCAAACATGGAGCAGAGAATCTTAGCCAGTGTCTCCAAAGACAGAGTGTACATCCGTGACAATGCCGTGTaGTCCTCAGAGCTCCCAAGC +
Preference number: 5 (lower is better)
Translates to: PNMEQRILASVSKDRVYIRDNAV*SSELPS
Trigger: GCTTGGGAGCTCTGAGGACAACACGGCATTGTCACG...GATGTACACTCTGTCTTTGGAGACACTGGCTAAGATTCTCTGCTCCATGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGCTTCTGCAGTGTGGCTaGGGCATCCTGCCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: KASSHYQTFTPSHSLLRMLLQCG*GILPAL
Trigger: CAGCGCTGGCAGGATGCCCAAGCCACACTGCAGAAG...CATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CAAAGGAGCTTCAAAGCCCACTCTGACCAGTATAGCTTGAGCAGCTGTGGACACGAAGTCCCTTTCATATaGAGTCACCCGAGACTCCCA +
Preference number: 5 (lower is better)
Translates to: QRSFKAHSDQYSLSSCGHEVPFI*SHPRLP
Trigger: TGGGAGTCTCGGGTGACTCAATATGAAAGGGACTTC...GTGTCCACAGCTGCTCAAGCTATACTGGTCAGAGTGGGCTTTGAAGCTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AGCGCGGACTATGGCCAGGAGGCGAATGTAGTCACTCAGGAGCTCAGCAAGGAGTGGTTCTTGAAGTCCTaGGATTTCTCTTTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SADYGQEANVVTQELSKEWFLKS*DFSFSN
Trigger: GTTTGAGAAAGAGAAATCCAAGGACTTCAAGAACCA...CTCCTTGCTGAGCTCCTGAGTGACTACATTCGCCTCCTGGCCATAGTCCGCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CAA 90 bp TGGGGCTTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCTGGTTCTTGAAGTCCTaGGATTTCTCTTTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: WGLMSLKSMGFPWALSVLWFLKS*DFSFSN
Trigger: GTTTGAGAAAGAGAAATCCAAGGACTTCAAGAACCA...GAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CAA 90 bp GATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCTGTGTGAACACCCTTaGGCTGTGTGTGCAACTCCT +
Preference number: 5 (lower is better)
Translates to: DASLGVHQGGGGQCIKRQLCEHP*AVCATP
Trigger: AGGAGTTGCACACACAGCCAAAGGGTGTTCACACAG...CTGCCTTTTTATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGAGCAACCTGAAATCTTaGTCTCTCTGGAGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: QGGGGQCIKRQRHTGGLWSNLKS*SLWRKE
Trigger: CTCTTTCCTCCAGAGAGACAAAGATTTCAGGTTGCT...CCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp ACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTTTGGGGCTTGATGTCCTaGAAGTCTATGGGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: TVAQMCPPMFGARDPHYLWGLMS*KSMGFP
Trigger: CGGGAAGCCCATAGACTTCAAGGACATCAAGCCCCA...AAGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS TCA 90 bp ACTTACTATACCTGGGCAACTTCTTGGTTAGGAGTATTCCAGACCTaGTTCCCAACTGCTCCCCAGCCTGCTGCTGTGAGTAAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: TYYTWATSWLGVFQT*FPTAPQPAAVSKGV
Trigger: CACTCCTTTACTCACAGCAGCAGGCTGGGGAGCAGTTGGGAATCAGGTCTGGAATACTCCTAACCAAGAAGTTGCCCAGGTATAGTAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261889.9
CDS CCA 90 bp TGTCAGCGGATCCCGCGGAGAAATAATTGTAAAGAGTCTCCGTGCTaGAGAACTCAAGATCTCCTTTCCCCTACCCCTTCAGGATTCATC +
Preference number: 5 (lower is better)
Translates to: CQRIPRRNNCKESPC*RTQDLLSPTPSGFI
Trigger: GATGAATCCTGAAGGGGTAGGGGAAAGGAGATCTTGAGTTCTCCAGCACGGAGACTCTTTACAATTATTTCTCCGCGGGATCCGCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560829.5
CDS-3UTR CAA 90 bp TCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGACTAGCTCCTCATAGGTaGGCTGGGGCTTCGAAGAAT +
Preference number: 5 (lower is better)
Translates to: SCPFISDQARPCPNMEQRLAPHR*AGASKN
Trigger: ATTCTTCGAAGCCCCAGCCAACCTATGAGGAGCTAG...TCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCCTAGCTCCTCATAGGTaGGCTGGGGCTTCGAAGAAT +
Preference number: 5 (lower is better)
Translates to: CPFISDQARPCPNMEQRILAPHR*AGASKN
Trigger: ATTCTTCGAAGCCCCAGCCAACCTATGAGGAGCTAG...GATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AAAGCATCAAGTCATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGAGCTTATCAGGCTTGTaGGCCCACAGCAGCCGAGCC +
Preference number: 5 (lower is better)
Translates to: KASSHYQTFTPSHSLLRMSLSGL*AHSSRA
Trigger: GGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGCT...CATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATGACTTGATGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTAGCTTATCAGGCTTGTaGGCCCACAGCAGCCGAGCC +
Preference number: 5 (lower is better)
Translates to: YQYSTPSHNSTTYCRSFASLSGL*AHSSRA
Trigger: GGCTCGGCTGCTGTGGGCCAACAAGCCTGATAAGCT...AGCAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp TCAGGAGCTCTTGGATCACCCTATCTAGAGGCAGAGGGCATGGCTTTCATGTCTGTTAAAAAGAAATACTaGCACCACTGGCCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: SGALGSPYLEAEGMAFMSVKKKY*HHWPFP
Trigger: GGGGAAGGGCCAGTGGTGCAAGTATTTCTTTTTAAC...AGACATGAAAGCCATGCCCTCTGCCTCTAGATAGGGTGATCCAAGAGCTCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGCAAAAGAGGCTTCAGTTGTTCTaGTCCATTTATCTCAGATCA +
Preference number: 5 (lower is better)
Translates to: DVLEVYGLPVGPECARQKRLQLF*SIYLRS
Trigger: TGATCTGAGATAAATGGACAAGAACAACTGAAGCCT...CTTTTGCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS TCA 90 bp CTGACTACCTCACTGGCTTCCCATGACATCCCTTTTCACAGCAACTaGAACCTACTTCCTGTCCGATCAGGAAGTAAGAAAGACGTTGGC +
Preference number: 5 (lower is better)
Translates to: LTTSLASHDIPFHSN*NLLPVRSGSKKDVG
Trigger: GCCAACGTCTTTCTTACTTCCTGATCGGACAGGAAGTAGGTTTCAGTTGCTGTGAAAAGGGATGTCATGGGAAGCCAGTGAGGTAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560829.5
CDS TCA 90 bp ATACCTTTTATCTGGGCAACTTCTTGGTTAGGAGTATTCCAGACCTaGTTCCCAACTGCTCCCCAGCCTGCTGCTGTGAGTAAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: IPFIWATSWLGVFQT*FPTAPQPAAVSKGV
Trigger: CACTCCTTTACTCACAGCAGCAGGCTGGGGAGCAGTTGGGAATCAGGTCTGGAATACTCCTAACCAAGAAGTTGCCCAGATAAAAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560861.1
CDS-3UTR CAA 90 bp GTACAGGGAATCAGAATGTTTACTGCGTTTTCTTGTCTCAGGTTGCCTCGCCCCGAGATCCTGTGGCTCTaGGTCTTGTTCTTCATGGAT +
Preference number: 5 (lower is better)
Translates to: VQGIRMFTAFSCLRLPRPEILWL*VLFFMD
Trigger: ATCCATGAAGAACAAGACCAAGAGCCACAGGATCTC...GGGGCGAGGCAACCTGAGACAAGAAAACGCAGTAAACATTCTGATTCCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TTTTGTGTGCTGTCCAAGGATAGCTCCACTGTGGCATCTGTGGTCCTAGCTACTGAGATCCTGTGGCTCTaGGTCTTGTTCTTCATGGAT +
Preference number: 5 (lower is better)
Translates to: FCVLSKDSSTVASVVLATEILWL*VLFFMD
Trigger: ATCCATGAAGAACAAGACCAAGAGCCACAGGATCTC...AGTAGCTAGGACCACAGATGCCACAGTGGAGCTATCCTTGGACAGCACACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559389.1
CDS-3UTR CAA 90 bp CCAAAGTTGATGGTAAGGATACTGAGGGGTAGGGAGAGTGACTTTTTCCAAAAACGTGACAATGCCGTGTaGTCCTCAGAGCTCCCAAGC +
Preference number: 5 (lower is better)
Translates to: PKLMVRILRGRESDFFQKRDNAV*SSELPS
Trigger: GCTTGGGAGCTCTGAGGACAACACGGCATTGTCACG...TTTTTGGAAAAAGTCACTCTCCCTACCCCTCAGTATCCTTACCATCAACTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CCAAAGTTGATGGTAAGGATACTGAGGGGTAGGGAGAGTGACTTTTTCCAAAAATGCAGCTTATCAGGCTaGTTGGCCCACAGCAGCCGA +
Preference number: 5 (lower is better)
Translates to: PKLMVRILRGRESDFFQKCSLSG*LAHSSR
Trigger: TCGGCTGCTGTGGGCCAACAAGCCTGATAAGCTGCA...TTTTTGGAAAAAGTCACTCTCCCTACCCCTCAGTATCCTTACCATCAACTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTTGCAGCTTATCAGGCTaGTTGGCCCACAGCAGCCGA +
Preference number: 5 (lower is better)
Translates to: YQYSTPSHNSTTYCRSFACSLSG*LAHSSR
Trigger: TCGGCTGCTGTGGGCCAACAAGCCTGATAAGCTGCA...AGCAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp AGACCGGCAGAGATCTGTGTGAACACCCTTTGGCTGTGTGTGCAACTCCTGAGGTGGTTCTTGAAGTCCTaGGATTTCTCTTTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: RPAEICVNTLWLCVQLLRWFLKS*DFSFSN
Trigger: GTTTGAGAAAGAGAAATCCAAGGACTTCAAGAACCA...CCTCAGGAGTTGCACACACAGCCAAAGGGTGTTCACACAGATCTCTGCCGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp ACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGGGAATACGAAACAGATaGAGACCCTCAGAACAGGTA +
Preference number: 5 (lower is better)
Translates to: TGPSPGAASVYRESECLLGIRNR*RPSEQV
Trigger: TACCTGTTCTGAGGGTCTCAATCTGTTTCGTATTCC...CAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CACCTGTTAAAAAGAAATACTTGCACCACTGGCCCTTCCCCTGGTGCTGCATCTGACAGTAGAGCTTCTTaGAACCTCCTAAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: HLLKRNTCTTGPSPGAASDSRAS*NLLRFR
Trigger: CCTGAACCTTAGGAGGTTCAAAGAAGCTCTACTGTC...AGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAGTATTTCTTTTTAACAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGCTCTGGAGGATAAAACCAAAGTaGATGGTAAGGATACTGAGG +
Preference number: 5 (lower is better)
Translates to: QGGGGQCIKRQRHTGGLWRIKPK*MVRILR
Trigger: CCTCAGTATCCTTACCATCAACTTTGGTTTTATCCT...CCAGAGCCCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GTTGTTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCTTACAAAGGGTTTCATaGTCTGCCCAGTGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: VVLVHLSQIRHDPVQTWSLQRVS*SAQCLG
Trigger: GCCCAGACACTGGGCAGACAATGAAACCCTTTGTAA...GCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TCAGCACTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAGGTTCCATAAGGCTTCAGTTGTTCTaGTCCATTTATCTCAGATCA +
Preference number: 5 (lower is better)
Translates to: SALRSPNAELAKGKAGSIRLQLF*SIYLRS
Trigger: TGATCTGAGATAAATGGACAAGAACAACTGAAGCCT...TATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CAA 90 bp TTGATGTCCTTGAAGTCTATGGGCTTCCCGTGGGCCCTGAGTGTGCTCGGCAAAGTCATCTTCAAGGATTaGGTTTCTAGAAGTGCCTAT +
Preference number: 5 (lower is better)
Translates to: LMSLKSMGFPWALSVLGKVIFKD*VSRSAY
Trigger: ATAGGCACTTCTAGAAACCAAATCCTTGAAGATGAC...TTTGCCGAGCACACTCAGGGCCCACGGGAAGCCCATAGACTTCAAGGACATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CTCCAATGCTTACCAGGTCAGGTGGGTATCCAAATGGGACTTGTCCTTAACAGGGTATCCAAATGGGACTaGTCCTTAACAGGCCTACTG +
Preference number: 5 (lower is better)
Translates to: LQCLPGQVGIQMGLVLNRVSKWD*SLTGLL
Trigger: CAGTAGGCCTGTTAAGGACAAGTCCCATTTGGATAC...CCTGTTAAGGACAAGTCCCATTTGGATACCCACCTGACCTGGTAAGCATTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS GCA 90 bp AGTAGGTGGCCTCATGCCAGTGACCAATACTATGGCTTACAGAAGTaGCTCCCTCAGATCAGTCAGTTCATAAGGCTACATACTTTCCCT +
Preference number: 5 (lower is better)
Translates to: SRWPHASDQYYGLQK*LPQISQFIRLHTFP
Trigger: AGGGAAAGTATGTAGCCTTATGAACTGACTGATCTGAGGGAGGCACTTCTGTAAGCCATAGTATTGGTCACTGGCATGAGGCCACCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559961.1
CDS-3UTR CAA 90 bp GGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCAGACCTTCGGGGCTTCGAAGAATTaGTGGCTTCCTGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: GHGFHVYGDKASSHYQTFGASKN*WLPEEE
Trigger: TTCCTCCTCAGGAAGCCACAAATTCTTCGAAGCCCC...GAAGGTCTGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261889.9
ENST00000559844.6
CDS-3UTR CAA 90 bp CTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCGACTGTCAAATCAAATaGATCCTCCTGTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LALPLVLHLCTGNQNVYCDCQIK*ILLFFF
Trigger: GAAGAAGAACAGGAGGATCAATTTGATTTGACAGTC...GCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GGTCCATCAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGCGTCACACAGGTGGGACTGTCAAATCAAATaGATCCTCCTGTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GPSRWRRTVYKKAASHRWDCQIK*ILLFFF
Trigger: GAAGAAGAACAGGAGGATCAATTTGATTTGACAGTC...CCACCTGTGTGACGCTGCCTTTTTATACACTGTCCTCCTCCACCTTGATGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp TATGAGGCTCTTCTCCGGGGGCGGAGGGACAATGAAGCCATTCTGAGAGTGCTTTTTACTGCAAACTGTTaGCTTCTGAACAATGGTAAG +
Preference number: 5 (lower is better)
Translates to: YEALLRGRRDNEAILRVLFTANC*LLNNGK
Trigger: CTTACCATTGTTCAGAAGCAAACAGTTTGCAGTAAA...AAGCACTCTCAGAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559389.1
ENST00000560260.5
CDS-3UTR CAA 90 bp GGTAATGTGGAAAGCGCCTCCCAGGTCCTATCAGACACCCATGTGATGTGGCTCTTTACTGCAAACTGTTaGCTTCTGAACAATGGTAAG +
Preference number: 5 (lower is better)
Translates to: GNVESASQVLSDTHVMWLFTANC*LLNNGK
Trigger: CTTACCATTGTTCAGAAGCAAACAGTTTGCAGTAAA...GAGCCACATCACATGGGTGTCTGATAGGACCTGGGAGGCGCTTTCCACATTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGATCTTGATGGTCATTTaGCTGACGGCATCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: FLSIYLRSGTTLSKHGAEILMVI*LTASVA
Trigger: AGCCACAGATGCCGTCAGCAAAATGACCATCAAGAT...CTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GAAGCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGACCCAGAAAGTCGCATGGCTAGACTCTTaGCAAACTGGGCTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: EAILRVLLGKLLIKTQKVAWLDS*QTGLCS
Trigger: TGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGC...GACTTTCTGGGTCTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CAA 90 bp TGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGTCGTGGGGAGCATGGCTAGACTCTTaGCAAACTGGGCTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: WKLNEITVRVTGDSWSWGAWLDS*QTGLCS
Trigger: TGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGC...TCCCCACGACCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp CATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTTGATGGGAGGAAGAAGTCATTGTaGGCCTGTTCCTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: HYQTFTPSHSLLRMCFDGRKKSL*ACSWWS
Trigger: GCTCCACCAGGAACAGGCCAACAATGACTTCTTCCT...CCCATCAAAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTTGATGGGAGGAGGAAGAAGTCATaGTTGGCCTGTTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: HYQTFTPSHSLLRMCFDGRRKKS*LACSWW
Trigger: CCACCAGGAACAGGCCAACAATGACTTCTTCCTCCT...CCCATCAAAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CCAAAGTTGATGGTAAGGATACTGAGGGGTAGGGAGAGTGACTTTTTCCAAAAATCGAGGATCTCGTCCTaGGCCTGCTGCAGCTTATCA +
Preference number: 5 (lower is better)
Translates to: PKLMVRILRGRESDFFQKSRISS*ACCSLS
Trigger: TGATAAGCTGCAGCAGGCCAAGGACGAGATCCTCGA...TTTTTGGAAAAAGTCACTCTCCCTACCCCTCAGTATCCTTACCATCAACTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCTTAGAAGTCCCTTTCATATaGAGTCACCCGAGACTCCCA +
Preference number: 5 (lower is better)
Translates to: PFISDQARPCPNMEQRILEVPFI*SHPRLP
Trigger: TGGGAGTCTCGGGTGACTCAATATGAAAGGGACTTC...TAAGATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CAA 90 bp CCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATATGGTTCTTGAAGTCCTaGGATTTCTCTTTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: PRQDASLGVHQGGGGQCIWFLKS*DFSFSN
Trigger: GTTTGAGAAAGAGAAATCCAAGGACTTCAAGAACCA...TATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp GATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAAAAAGGCAGAGTGTCTCAAGGTACTaGATCACGTGGTTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: DASLGVHQGGGGQCIKRQSVSRY*ITWFLK
Trigger: CTTCAAGAACCACGTGATCAAGTACCTTGAGACACT...CTGCCTTTTTATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp GGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGGTATTTTTGGGGGAAGCCCATCCTaGACTGACGAGACTCTGGCC +
Preference number: 5 (lower is better)
Translates to: GAFRMKIFWEELTVAGIFGGSPS*TDETLA
Trigger: GGCCAGAGTCTCGTCAGTCAAGGATGGGCTTCCCCC...AAAAATACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AACAATCATTCAACAGTTATCTATTTGACACCTGTTTTGAGCCTGAACCTTTGCGGGGGAAGCCCATCCTaGACTGACGAGACTCTGGCC +
Preference number: 5 (lower is better)
Translates to: NNHSTVIYLTPVLSLNLCGGSPS*TDETLA
Trigger: GGCCAGAGTCTCGTCAGTCAAGGATGGGCTTCCCCC...GCAAAGGTTCAGGCTCAAAACAGGTGTCAAATAGATAACTGTTGAATGATTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CCTAGGCAGGATGCATCACTAGGGGTCCATCAAGGTGGAGGAGGACAGTGTATAAGGATAAAACCAAAGTaGATGGTAAGGATACTGAGG +
Preference number: 5 (lower is better)
Translates to: PRQDASLGVHQGGGGQCIRIKPK*MVRILR
Trigger: CCTCAGTATCCTTACCATCAACTTTGGTTTTATCCT...TATACACTGTCCTCCTCCACCTTGATGGACCCCTAGTGATGCATCCTGCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TCAGCACTCCGGAGCCCAAACGCTGAACTAGCCAAGGGGAAAGCAGGTTCCATACCTATTGTAGGTCTTTaGCTTAAAGCAGGAAACTAT +
Preference number: 5 (lower is better)
Translates to: SALRSPNAELAKGKAGSIPIVGL*LKAGNY
Trigger: ATAGTTTCCTGCTTTAAGCAAAAGACCTACAATAGG...TATGGAACCTGCTTTCCCCTTGGCTAGTTCAGCGTTTGGGCTCCGGAGTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp ACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTTTCTGCCCCAAACCTATaGCCTCATGTGTTACAAAGG +
Preference number: 5 (lower is better)
Translates to: TVAQMCPPMFGARDPHYLSAPNL*PHVLQR
Trigger: CCTTTGTAACACATGAGGCAATAGGTTTGGGGCAGA...AAGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTTGATGGGTGTGTCCTCCTATGTTaGGAGCCAGGGATCCCCATT +
Preference number: 5 (lower is better)
Translates to: HYQTFTPSHSLLRMCFDGCVLLC*EPGIPI
Trigger: AATGGGGATCCCTGGCTCCAAACATAGGAGGACACA...CCCATCAAAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTGAAGTAAGAAAGACGTaGGCTGTCAGCGGATCCCGC +
Preference number: 5 (lower is better)
Translates to: YQYSTPSHNSTTYCRSFAEVRKT*AVSGSR
Trigger: GCGGGATCCGCTGACAGCCAACGTCTTTCTTACTTC...AGCAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560829.5
CDS-3UTR CAA 90 bp TATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTCTAGCTCCTCATAGGTaGGCTGGGGCTTCGAAGAAT +
Preference number: 5 (lower is better)
Translates to: YQYSTPSHNSTTYCRSFALAPHR*AGASKN
Trigger: ATTCTTCGAAGCCCCAGCCAACCTATGAGGAGCTAG...AGCAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp ACTGGCCCTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGAGCTCTTTCCTATGGTaGACTAGAGTTTCTACAACA +
Preference number: 5 (lower is better)
Translates to: TGPSPGAASVYRESECLLSSFLW*TRVSTT
Trigger: TGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGCT...CAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAGGGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCAGACCTTCCTTTTCGGACCACTGTaGAAATCCTCTCGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: GHGFHVYGDKASSHYQTFLFGPL*KSSRSP
Trigger: GGGACTTCGAGAGGATTTCAACAGTGGTCCGAAAAG...GAAGGTCTGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TCTTCCTTTGTGCTCCTGTTATTCCTTGTAGAGGCTTCTGGCTCAGTACCCCTAAGTGTCTCAAGGTACTaGATCACGTGGTTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: SSFVLLLFLVEASGSVPLSVSRY*ITWFLK
Trigger: CTTCAAGAACCACGTGATCAAGTACCTTGAGACACT...TAGGGGTACTGAGCCAGAAGCCTCTACAAGGAATAACAGGAGCACAAAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAGTGTCTCAAGGTACTaGATCACGTGGTTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: FLSIYLRSGTTLSKHGAESVSRY*ITWFLK
Trigger: CTTCAAGAACCACGTGATCAAGTACCTTGAGACACT...CTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CAA 90 bp ACTCAAAACATGATGGGAGCAAGCTACAAACACACAAGAGGCCGCTATAAATCTCTGTGTGAACACCCTTaGGCTGTGTGTGCAACTCCT +
Preference number: 5 (lower is better)
Translates to: TQNMMGASYKHTRGRYKSLCEHP*AVCATP
Trigger: AGGAGTTGCACACACAGCCAAAGGGTGTTCACACAG...AGATTTATAGCGGCCTCTTGTGTGTTTGTAGCTTGCTCCCATCATGTTTTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CACCTGTTAAAAAGAAATACTTGCACCACTGGCCCTTCCCCTGGTGCTGCATCTGAGGAATCTGCAGTATaGAGAGACACACGTTTACAA +
Preference number: 5 (lower is better)
Translates to: HLLKRNTCTTGPSPGAASEESAV*RDTRLQ
Trigger: TTGTAAACGTGTGTCTCTCAATACTGCAGATTCCTC...AGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAGTATTTCTTTTTAACAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTGAGGAATCTGCAGTATaGAGAGACACACGTTTACAA +
Preference number: 5 (lower is better)
Translates to: HCSTDVSSYVWSQGSPLSEESAV*RDTRLQ
Trigger: TTGTAAACGTGTGTCTCTCAATACTGCAGATTCCTC...AGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCGTTTTCAGCAACCTGAAATCTTaGTCTCTCTGGAGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: LPLVLHLCTGNQNVYCVFSNLKS*SLWRKE
Trigger: CTCTTTCCTCCAGAGAGACAAAGATTTCAGGTTGCT...GAAAACGCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTTGATGGGATCTTGATGGTCATTTaGCTGACGGCATCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: HYQTFTPSHSLLRMCFDGILMVI*LTASVA
Trigger: AGCCACAGATGCCGTCAGCAAAATGACCATCAAGAT...CCCATCAAAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GTTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTAGGAGGAAGAAGTCATaGTTGGCCTGTTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: VPSYRSIQNENLLGRVNSRRKKS*LACSWW
Trigger: CCACCAGGAACAGGCCAACAATGACTTCTTCCTCCT...ACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AGTTGCTGGTATTTTTGTGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTATGCAGCTTATCAGGCTaGTTGGCCCACAGCAGCCGA +
Preference number: 5 (lower is better)
Translates to: SCWYFCVGDNSYSRFSHLCSLSG*LAHSSR
Trigger: TCGGCTGCTGTGGGCCAACAAGCCTGATAAGCTGCA...TAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACACAAAAATACCAGCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCAGACCTTCTACCTGGGCAACTTCTaGGTTAGGAGTATTCCAGAC +
Preference number: 5 (lower is better)
Translates to: GHGFHVYGDKASSHYQTFYLGNF*VRSIPD
Trigger: GTCTGGAATACTCCTAACCAAGAAGTTGCCCAGGTA...GAAGGTCTGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp ACTGTAGCACAGATGTGTCCTCCTATGTTTGGAGCCAGGGATCCCCATTATCTTAAAAGAGAAAGGCTCTaGCTTAATGATAGGGACACC +
Preference number: 5 (lower is better)
Translates to: TVAQMCPPMFGARDPHYLKRERL*LNDRDT
Trigger: GGTGTCCCTATCATTAAGCAAGAGCCTTTCTCTTTT...AAGATAATGGGGATCCCTGGCTCCAAACATAGGAGGACACATCTGTGCTACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CATTATCAGACCTTCACACCTTCACACAGTCTACTGAGGATGTGTTTTGATGGGGTTAAAAAGAAATACTaGCACCACTGGCCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: HYQTFTPSHSLLRMCFDGVKKKY*HHWPFP
Trigger: GGGGAAGGGCCAGTGGTGCAAGTATTTCTTTTTAAC...CCCATCAAAACACATCCTCAGTAGACTGTGTGAAGGTGTGAAGGTCTGATAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CACCTGTTAAAAAGAAATACTTGCACCACTGGCCCTTCCCCTGGTGCTGCATCTAGGATAAAACCAAAGTaGATGGTAAGGATACTGAGG +
Preference number: 5 (lower is better)
Translates to: HLLKRNTCTTGPSPGAASRIKPK*MVRILR
Trigger: CCTCAGTATCCTTACCATCAACTTTGGTTTTATCCT...AGATGCAGCACCAGGGGAAGGGCCAGTGGTGCAAGTATTTCTTTTTAACAGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAGAAATGCATACTGTTTaGGGCATAATGGGGTATCTG +
Preference number: 5 (lower is better)
Translates to: SCPFISDQARPCPNMEQREMHTV*GIMGYL
Trigger: CAGATACCCCATTATGCCCAAAACAGTATGCATTTC...TCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AGGATCAGTTATACCGACTGTCAAATCAAATTGATCCTCCTGTTCTTCTTCCTCCCACTACTGGCCTACTaGATTTCCACACGTGCAAGC +
Preference number: 5 (lower is better)
Translates to: RISYTDCQIKLILLFFFLPLLAY*ISTRAS
Trigger: GCTTGCACGTGTGGAAATCAAGTAGGCCAGTAGTGG...GAGGAAGAAGAACAGGAGGATCAATTTGATTTGACAGTCGGTATAACTGATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CAA 90 bp TGTTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGGAAGACAGGCTTCAGTaGTTCTTGTCCATTTATCTC +
Preference number: 5 (lower is better)
Translates to: CSCPFISDQARPCPNMEQEDRLQ*FLSIYL
Trigger: GAGATAAATGGACAAGAACAACTGAAGCCTGTCTTC...CTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CAA 90 bp ACTCAAAACATGATGGGAGCAAGCTACAAACACACAAGAGGCCGCTATAAATCTCTGTGGCTCTTGGTCTaGTTCTTCATGGATCCCATT +
Preference number: 5 (lower is better)
Translates to: TQNMMGASYKHTRGRYKSLWLLV*FFMDPI
Trigger: AATGGGATCCATGAAGAACAAGACCAAGAGCCACAG...AGATTTATAGCGGCCTCTTGTGTGTTTGTAGCTTGCTCCCATCATGTTTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TGCATTCATACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCCTGTGGCTCTTGGTCTaGTTCTTCATGGATCCCATT +
Preference number: 5 (lower is better)
Translates to: CIHTIPYLLRISYTDCQILWLLV*FFMDPI
Trigger: AATGGGATCCATGAAGAACAAGACCAAGAGCCACAG...GATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTATGAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559389.1
CDS-3UTR CAA 90 bp GCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGGTCTGTGGCTCTTGGTCTaGTTCTTCATGGATCCCATT +
Preference number: 5 (lower is better)
Translates to: ATGAFRMKIFWEELTVAGLWLLV*FFMDPI
Trigger: AATGGGATCCATGAAGAACAAGACCAAGAGCCACAG...ACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTGAGATCCTGTGGCTCTaGGTCTTGTTCTTCATGGAT +
Preference number: 5 (lower is better)
Translates to: YQYSTPSHNSTTYCRSFAEILWL*VLFFMD
Trigger: ATCCATGAAGAACAAGACCAAGAGCCACAGGATCTC...AGCAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp TATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTGCATCTGTGGCTTTGTaGAACATCTTGAGGAGACCA +
Preference number: 5 (lower is better)
Translates to: YQYSTPSHNSTTYCRSFAASVAL*NILRRP
Trigger: TGGTCTCCTCAAGATGTTCAACAAAGCCACAGATGC...AGCAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp AGAAGAATCTTCCTTCCCAACTTTCACTTTTGTCATCCCTATGAGGCTCTTCTCGCATCTGTGGCTTTGTaGAACATCTTGAGGAGACCA +
Preference number: 5 (lower is better)
Translates to: RRIFLPNFHFCHPYEALLASVAL*NILRRP
Trigger: TGGTCTCCTCAAGATGTTCAACAAAGCCACAGATGC...GAGAAGAGCCTCATAGGGATGACAAAAGTGAAAGTTGGGAAGGAAGATTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CAA 90 bp GCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGGTATCTTGATGGTCATTTaGCTGACGGCATCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: ATGAFRMKIFWEELTVAGILMVI*LTASVA
Trigger: AGCCACAGATGCCGTCAGCAAAATGACCATCAAGAT...ACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CGGAGGGACAATGAAGCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGAGCTCTTTCCTATGGTaGACTAGAGTTTCTACAACA +
Preference number: 5 (lower is better)
Translates to: RRDNEAILRVLLGKLLIKSSFLW*TRVSTT
Trigger: TGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGCT...CTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGCTTCATTGTCCCTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CAA 90 bp AAATATATATGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGCGTGACAATGCCGTGTaGTCCTCAGAGCTCCCAAGC +
Preference number: 5 (lower is better)
Translates to: KYIWKLNEITVRVTGDSWRDNAV*SSELPS
Trigger: GCTTGGGAGCTCTGAGGACAACACGGCATTGTCACG...CCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCATATATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp ACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCAAATCAAATTGATCGAAGTCCCTTTCATATaGAGTCACCCGAGACTCCCA +
Preference number: 5 (lower is better)
Translates to: TIPYLLRISYTDCQIKLIEVPFI*SHPRLP
Trigger: TGGGAGTCTCGGGTGACTCAATATGAAAGGGACTTC...GATCAATTTGATTTGACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CAA 90 bp GGTAATGAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTTCTGACCAGTATAGCTaGAGCAGCTGTGGACACAGC +
Preference number: 5 (lower is better)
Translates to: GNERQKKVEESAVLRDTRSDQYS*SSCGHS
Trigger: GCTGTGTCCACAGCTGCTCAAGCTATACTGGTCAGA...ACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTCATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CCAAACATGGAGCAGAGAATCTTAGCCAGTGTCTCCAAAGACAGAGTGTACATCGAAATGCATACTGTTTaGGGCATAATGGGGTATCTG +
Preference number: 5 (lower is better)
Translates to: PNMEQRILASVSKDRVYIEMHTV*GIMGYL
Trigger: CAGATACCCCATTATGCCCAAAACAGTATGCATTTC...GATGTACACTCTGTCTTTGGAGACACTGGCTAAGATTCTCTGCTCCATGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TTACACCTTTTAGACTCAGTTCAAGCATCAGGTTCTCCACAAAGTCCTCCCTCCGAGGAATCTGCAGTATaGAGAGACACACGTTTACAA +
Preference number: 5 (lower is better)
Translates to: LHLLDSVQASGSPQSPPSEESAV*RDTRLQ
Trigger: TTGTAAACGTGTGTCTCTCAATACTGCAGATTCCTC...GGAGGGAGGACTTTGTGGAGAACCTGATGCTTGAACTGAGTCTAAAAGGTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GTTAACAGTTGCTGGTATTTTTGTGTAGGCGACAATTCTTATTCCCGTTTCTCTTGTGTCCTCCTATGTTaGGAGCCAGGGATCCCCATT +
Preference number: 5 (lower is better)
Translates to: VNSCWYFCVGDNSYSRFSCVLLC*EPGIPI
Trigger: AATGGGGATCCCTGGCTCCAAACATAGGAGGACACA...AGAGAAACGGGAATAAGAATTGTCGCCTACACAAAAATACCAGCAACTGTTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CAA 90 bp TTCCTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTTGTGTCCTCCTATGTTaGGAGCCAGGGATCCCCATT +
Preference number: 5 (lower is better)
Translates to: FLATGAFRMKIFWEELTVCVLLC*EPGIPI
Trigger: AATGGGGATCCCTGGCTCCAAACATAGGAGGACACA...AACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CAA 90 bp TTCTTGTCCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAGGCTTCAGTTGTTCTaGTCCATTTATCTCAGATCA +
Preference number: 5 (lower is better)
Translates to: FLSIYLRSGTTLSKHGAERLQLF*SIYLRS
Trigger: TGATCTGAGATAAATGGACAAGAACAACTGAAGCCT...CTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGGACAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CAA 90 bp TTTATCACAAGATGCAGTTATCGGCAGGTGACACATGCACCAGAAGACAGGCTTGAAGACAGGCTTCAGTaGTTCTTGTCCATTTATCTC +
Preference number: 5 (lower is better)
Translates to: FITRCSYRQVTHAPEDRLEDRLQ*FLSIYL
Trigger: GAGATAAATGGACAAGAACAACTGAAGCCTGTCTTC...AAGCCTGTCTTCTGGTGCATGTGTCACCTGCCGATAACTGCATCTTGTGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CTTCCCCTGGTGCTGCATCTGTGTACAGGGAATCAGAATGTTTACTGCGTTTTCGTCATCTTCAAGGATTaGGTTTCTAGAAGTGCCTAT +
Preference number: 5 (lower is better)
Translates to: LPLVLHLCTGNQNVYCVFVIFKD*VSRSAY
Trigger: ATAGGCACTTCTAGAAACCAAATCCTTGAAGATGAC...GAAAACGCAGTAAACATTCTGATTCCCTGTACACAGATGCAGCACCAGGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGTCGTGGGGATCCCAACTTTCACTTTaGTCATCCCTGTGTTGTAAC +
Preference number: 5 (lower is better)
Translates to: WKLNEITVRVTGDSWSWGSQLSL*SSLCCN
Trigger: GTTACAACACAGGGATGACAAAAGTGAAAGTTGGGA...TCCCCACGACCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560829.5
CDS-3UTR CAA 90 bp AATTCTCTTCTTCTCTTAGAAGAGAATGTCCTGTTCTTAGGGAAATGCATACTGCTAGCTCCTCATAGGTaGGCTGGGGCTTCGAAGAAT +
Preference number: 5 (lower is better)
Translates to: NSLLLLEENVLFLGKCILLAPHR*AGASKN
Trigger: ATTCTTCGAAGCCCCAGCCAACCTATGAGGAGCTAG...CAGTATGCATTTCCCTAAGAACAGGACATTCTCTTCTAAGAGAAGAAGAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GCCATTCTGAGAGTGCTTCTCGGAAAGCTTCTCATAAAGACCCAGAAAGTCACTGACTGTCAAATCAAATaGATCCTCCTGTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: AILRVLLGKLLIKTQKVTDCQIK*ILLFFF
Trigger: GAAGAAGAACAGGAGGATCAATTTGATTTGACAGTC...AGTGACTTTCTGGGTCTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559389.1
CDS-3UTR CAA 90 bp ACTAGAGTTTCTACAACAGCATGCAGTTTCCGTAAGCGCTGCTCCTCACACTCTTTTACTGCAAACTGTTaGCTTCTGAACAATGGTAAG +
Preference number: 5 (lower is better)
Translates to: TRVSTTACSFRKRCSSHSFTANC*LLNNGK
Trigger: CTTACCATTGTTCAGAAGCAAACAGTTTGCAGTAAA...AGAGTGTGAGGAGCAGCGCTTACGGAAACTGCATGCTGTTGTAGAAACTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000560260.5
CDS-3UTR CAA 90 bp TTATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTTTGTTGAACATCTaGAGGAGACCAGCACCACTC +
Preference number: 5 (lower is better)
Translates to: LYQYSTPSHNSTTYCRSFALLNI*RRPAPL
Trigger: GAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGC...AAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp AATGCTTCACATCTCCTTACACTTATATTCCCATCTAGGGCATTGGAAAATGCCGCATCTGTGGCTTTGTaGAACATCTTGAGGAGACCA +
Preference number: 5 (lower is better)
Translates to: NASHLLTLIFPSRALENAASVAL*NILRRP
Trigger: TGGTCTCCTCAAGATGTTCAACAAAGCCACAGATGC...GGCATTTTCCAATGCCCTAGATGGGAATATAAGTGTAAGGAGATGTGAAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGGTATTTTTAGGAAGAAGTCATTGTaGGCCTGTTCCTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: GAFRMKIFWEELTVAGIFRKKSL*ACSWWS
Trigger: GCTCCACCAGGAACAGGCCAACAATGACTTCTTCCT...AAAAATACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CATTTGGCACCCAGATCTTGGTTTCTAAATAACATTCTCTGGCTGGGTATGGTGAAAAGAGAAAGGCTCTaGCTTAATGATAGGGACACC +
Preference number: 5 (lower is better)
Translates to: HLAPRSWFLNNILWLGMVKRERL*LNDRDT
Trigger: GGTGTCCCTATCATTAAGCAAGAGCCTTTCTCTTTT...CACCATACCCAGCCAGAGAATGTTATTTAGAAACCAAGATCTGGGTGCCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AATGCTTCACATCTCCTTACACTTATATTCCCATCTAGGGCATTGGAAAATGCCGACAGTAGAGCTTCTTaGAACCTCCTAAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: NASHLLTLIFPSRALENADSRAS*NLLRFR
Trigger: CCTGAACCTTAGGAGGTTCAAAGAAGCTCTACTGTC...GGCATTTTCCAATGCCCTAGATGGGAATATAAGTGTAAGGAGATGTGAAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AATTCTCTTCTTCTCTTAGAAGAGAATGTCCTGTTCTTAGGGAAATGCATACTGCTGTGTGAACACCCTTaGGCTGTGTGTGCAACTCCT +
Preference number: 5 (lower is better)
Translates to: NSLLLLEENVLFLGKCILLCEHP*AVCATP
Trigger: AGGAGTTGCACACACAGCCAAAGGGTGTTCACACAG...CAGTATGCATTTCCCTAAGAACAGGACATTCTCTTCTAAGAGAAGAAGAGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTTTACAAGTTTACTGCGTTTTCTaGTCTCAGGTTGCCTCGCCC +
Preference number: 5 (lower is better)
Translates to: ERQKKVEESAVLRDTRLQVYCVF*SQVASP
Trigger: GGGCGAGGCAACCTGAGACAAGAAAACGCAGTAAAC...TTGTAAACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AATTCTCTTCTTCTCTTAGAAGAGAATGTCCTGTTCTTAGGGAAATGCATACTGGTTTACTGCGTTTTCTaGTCTCAGGTTGCCTCGCCC +
Preference number: 5 (lower is better)
Translates to: NSLLLLEENVLFLGKCILVYCVF*SQVASP
Trigger: GGGCGAGGCAACCTGAGACAAGAAAACGCAGTAAAC...CAGTATGCATTTCCCTAAGAACAGGACATTCTCTTCTAAGAGAAGAAGAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTTCTGCCCCAAACCTATaGCCTCATGTGTTACAAAGG +
Preference number: 5 (lower is better)
Translates to: LATGAFRMKIFWEELTVASAPNL*PHVLQR
Trigger: CCTTTGTAACACATGAGGCAATAGGTTTGGGGCAGA...AGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp TTATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGAGATCCTGTGGCTCTaGGTCTTGTTCTTCATGGAT +
Preference number: 5 (lower is better)
Translates to: LYQYSTPSHNSTTYCRSFEILWL*VLFFMD
Trigger: ATCCATGAAGAACAAGACCAAGAGCCACAGGATCTC...AAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp CTAAATCTTCTTTTTACTGCAAACTGTTTGCTTCTGAACAATGGTAAGCTTGTCGGGGCTTCGAAGAATTaGTGGCTTCCTGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: LNLLFTANCLLLNNGKLVGASKN*WLPEEE
Trigger: TTCCTCCTCAGGAAGCCACAAATTCTTCGAAGCCCC...GACAAGCTTACCATTGTTCAGAAGCAAACAGTTTGCAGTAAAAAGAAGATTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559389.1
CDS-3UTR CAA 90 bp GGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCAGACCTTCGACTGTCAAATCAAATaGATCCTCCTGTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GHGFHVYGDKASSHYQTFDCQIK*ILLFFF
Trigger: GAAGAAGAACAGGAGGATCAATTTGATTTGACAGTC...GAAGGTCTGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AATTCTCTTCTTCTCTTAGAAGAGAATGTCCTGTTCTTAGGGAAATGCATACTGGCTTTGTTGAACATCTaGAGGAGACCAGCACCACTC +
Preference number: 5 (lower is better)
Translates to: NSLLLLEENVLFLGKCILALLNI*RRPAPL
Trigger: GAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGC...CAGTATGCATTTCCCTAAGAACAGGACATTCTCTTCTAAGAGAAGAAGAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp ACCCTATGGATGCCTTCAAATTACACAGCTTTACAGATCAACTTTGTGAAGATAGCATGGCTAGACTCTTaGCAAACTGGGCTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: TLWMPSNYTALQINFVKIAWLDS*QTGLCS
Trigger: TGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGC...TATCTTCACAAAGTTGATCTGTAAAGCTGTGTAATTTGAAGGCATCCATAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AAATATATATGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGAGGAAGAAGTCATTGTaGGCCTGTTCCTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: KYIWKLNEITVRVTGDSWRKKSL*ACSWWS
Trigger: GCTCCACCAGGAACAGGCCAACAATGACTTCTTCCT...CCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCATATATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp AATTCTCTTCTTCTCTTAGAAGAGAATGTCCTGTTCTTAGGGAAATGCATACTGGAAGTCCCTTTCATATaGAGTCACCCGAGACTCCCA +
Preference number: 5 (lower is better)
Translates to: NSLLLLEENVLFLGKCILEVPFI*SHPRLP
Trigger: TGGGAGTCTCGGGTGACTCAATATGAAAGGGACTTC...CAGTATGCATTTCCCTAAGAACAGGACATTCTCTTCTAAGAGAAGAAGAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AGTTGCTGGTATTTTTGTGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTACTTTTCGGACCACTGTaGAAATCCTCTCGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: SCWYFCVGDNSYSRFSHLLFGPL*KSSRSP
Trigger: GGGACTTCGAGAGGATTTCAACAGTGGTCCGAAAAG...TAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACACAAAAATACCAGCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CAA 90 bp CCAAAGTTGATGGTAAGGATACTGAGGGGTAGGGAGAGTGACTTTTTCCAAAAAGAAATGCATACTGTTTaGGGCATAATGGGGTATCTG +
Preference number: 5 (lower is better)
Translates to: PKLMVRILRGRESDFFQKEMHTV*GIMGYL
Trigger: CAGATACCCCATTATGCCCAAAACAGTATGCATTTC...TTTTTGGAAAAAGTCACTCTCCCTACCCCTCAGTATCCTTACCATCAACTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AGTTGCTGGTATTTTTGTGTAGGCGACAATTCTTATTCCCGTTTCTCTCATTTAGGGGCTTCGAAGAATTaGTGGCTTCCTGCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: SCWYFCVGDNSYSRFSHLGASKN*WLPAKR
Trigger: TCTCTTTGCAGGAAGCCACAAATTCTTCGAAGCCCC...TAAATGAGAGAAACGGGAATAAGAATTGTCGCCTACACAAAAATACCAGCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380285.7
CDS-3UTR CAA 90 bp CCATTTATCTCAGATCAGGCACGACCCTGTCCAAACATGGAGCAGAGAATCTTACCTATTGTAGGTCTTTaGCTTAAAGCAGGAAACTAT +
Preference number: 5 (lower is better)
Translates to: PFISDQARPCPNMEQRILPIVGL*LKAGNY
Trigger: ATAGTTTCCTGCTTTAAGCAAAAGACCTACAATAGG...TAAGATTCTCTGCTCCATGTTTGGACAGGGTCGTGCCTGATCTGAGATAAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AGGCAGAGGGCATGGCTTTCATGTCTATGGAGACAAAGCATCAAGTCATTATCATTTACTGCAAACTGTTaGCTTCTGAACAATGGTAAG +
Preference number: 5 (lower is better)
Translates to: RQRAWLSCLWRQSIKSLSFTANC*LLNNGK
Trigger: CTTACCATTGTTCAGAAGCAAACAGTTTGCAGTAAA...TGATAATGACTTGATGCTTTGTCTCCATAGACATGAAAGCCATGCCCTCTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AAATATATATGGAAGCTAAATGAAATAACGGTTAGAGTAACTGGGGACAGTTGGGCTTTGTTGAACATCTaGAGGAGACCAGCACCACTC +
Preference number: 5 (lower is better)
Translates to: KYIWKLNEITVRVTGDSWALLNI*RRPAPL
Trigger: GAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGC...CCAACTGTCCCCAGTTACTCTAACCGTTATTTCATTTAGCTTCCATATATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp TATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTGCTAGCTCTTTCCTATGGTaGACTAGAGTTTCTACAACA +
Preference number: 5 (lower is better)
Translates to: YQYSTPSHNSTTYCRSFASSFLW*TRVSTT
Trigger: TGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGCT...AGCAAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS-3UTR CAA 90 bp GAAAGACAAAAGAAAGTTGAGGAATCTGCAGTATTGAGAGACACACGTTTACAATACCTGGGCAACTTCTaGGTTAGGAGTATTCCAGAC +
Preference number: 5 (lower is better)
Translates to: ERQKKVEESAVLRDTRLQYLGNF*VRSIPD
Trigger: GTCTGGAATACTCCTAACCAAGAAGTTGCCCAGGTA...TTGTAAACGTGTGTCTCTCAATACTGCAGATTCCTCAACTTTCTTTTGTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp CTAGCTACAGGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGAAGACAGGCTTCAGTaGTTCTTGTCCATTTATCTC +
Preference number: 5 (lower is better)
Translates to: LATGAFRMKIFWEELTVAEDRLQ*FLSIYL
Trigger: GAGATAAATGGACAAGAACAACTGAAGCCTGTCTTC...AGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCCTGTAGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CAA 90 bp ACATATGCATTCATACCATCCCCTATCTTCTCAGGATCAGTTATACCGACTGTCTTTACTGCAAACTGTTaGCTTCTGAACAATGGTAAG +
Preference number: 5 (lower is better)
Translates to: TYAFIPSPIFSGSVIPTVFTANC*LLNNGK
Trigger: CTTACCATTGTTCAGAAGCAAACAGTTTGCAGTAAA...GACAGTCGGTATAACTGATCCTGAGAAGATAGGGGATGGTATGAATGCATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380285.7
ENST00000559389.1
CDS-3UTR CAA 90 bp AATTCTCTTCTTCTCTTAGAAGAGAATGTCCTGTTCTTAGGGAAATGCATACTGAGTGTCTCAAGGTACTaGATCACGTGGTTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: NSLLLLEENVLFLGKCILSVSRY*ITWFLK
Trigger: CTTCAAGAACCACGTGATCAAGTACCTTGAGACACT...CAGTATGCATTTCCCTAAGAACAGGACATTCTCTTCTAAGAGAAGAAGAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AATTCTCTTCTTCTCTTAGAAGAGAATGTCCTGTTCTTAGGGAAATGCATACTGGGAATACGAAACAGATaGAGACCCTCAGAACAGGTA +
Preference number: 5 (lower is better)
Translates to: NSLLLLEENVLFLGKCILGIRNR*RPSEQV
Trigger: TACCTGTTCTGAGGGTCTCAATCTGTTTCGTATTCC...CAGTATGCATTTCCCTAAGAACAGGACATTCTCTTCTAAGAGAAGAAGAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp AATTCTCTTCTTCTCTTAGAAGAGAATGTCCTGTTCTTAGGGAAATGCATACTGAAAAGAGAAAGGCTCTaGCTTAATGATAGGGACACC +
Preference number: 5 (lower is better)
Translates to: NSLLLLEENVLFLGKCILKRERL*LNDRDT
Trigger: GGTGTCCCTATCATTAAGCAAGAGCCTTTCTCTTTT...CAGTATGCATTTCCCTAAGAACAGGACATTCTCTTCTAAGAGAAGAAGAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS CCA 90 bp CAGGAGCTAAGAATACAGTGGATGAAACTCATGGTCCCATTTTCATaGAACTTGTCATCTAATGGAAAAGGCCAACATTACATTTACAAT +
Preference number: 5 (lower is better)
Translates to: QELRIQWMKLMVPFS*NLSSNGKGQHYIYN
Trigger: ATTGTAAATGTAATGTTGGCCTTTTCCATTAGATGACAAGTTCCATGAAAATGGGACCATGAGTTTCATCCACTGTATTCTTAGCTCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559961.1
CDS-3UTR CAA 90 bp ACCCTATGGATGCCTTCAAATTACACAGCTTTACAGATCAACTTTGTGAAGATAAGCTCTTTCCTATGGTaGACTAGAGTTTCTACAACA +
Preference number: 5 (lower is better)
Translates to: TLWMPSNYTALQINFVKISSFLW*TRVSTT
Trigger: TGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGCT...TATCTTCACAAAGTTGATCTGTAAAGCTGTGTAATTTGAAGGCATCCATAGGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000559844.6
CDS-3UTR CAA 90 bp GGAGCATTCAGAATGAAAATCTTCTGGGAAGAGTTAACAGTTGCTGGTATTTTTTGGTTCTTGAAGTCCTaGGATTTCTCTTTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GAFRMKIFWEELTVAGIFWFLKS*DFSFSN
Trigger: GTTTGAGAAAGAGAAATCCAAGGACTTCAAGAACCA...AAAAATACCAGCAACTGTTAACTCTTCCCAGAAGATTTTCATTCTGAATGCTCC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560861.1
CDS-3UTR CAA 90 bp TTATATCAATACTCCACCCCATCCCATAATTCCACCACCTATTGTAGGTCTTTTCCTATTGTAGGTCTTTaGCTTAAAGCAGGAAACTAT +
Preference number: 5 (lower is better)
Translates to: LYQYSTPSHNSTTYCRSFPIVGL*LKAGNY
Trigger: ATAGTTTCCTGCTTTAAGCAAAAGACCTACAATAGG...AAAAGACCTACAATAGGTGGTGGAATTATGGGATGGGGTGGAGTATTGATATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380285.7
ENST00000559844.6
ENST00000560829.5
CDS CCA 72 bp GCTACTCCCAGGGCTGGATGGCAGGGATCCAGTAGGTaGCCTCATGCCAGTGACCAATACTATGGCTTACAG +
Preference number: 6 (lower is better)
Translates to: ATPRAGWQGSSR*PHASDQYYGLQ
Trigger: CTGTAAGCCATAGTATTGGTCACTGGCATGAGGCCACCTACTGGATCCCTGCCATCCAGCCCTGGGAGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559961.1
CDS CCA 72 bp TCAGAGCTCCCAAGCATGGCTAGACTCTTTGCAAACTaGGCTGTGTTCAGCGCTAGCTCTGGAAGGAGGAAA +
Preference number: 6 (lower is better)
Translates to: SELPSMARLFAN*AVFSASSGRRK
Trigger: TTTCCTCCTTCCAGAGCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559401.1
CDS CCA 72 bp GCCCAGCTGGGAAGTTTAATGTCTAGGAGCAAAGCTTaGGTAAGACTCCTCTCCAAGCTTCCAGAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: AQLGSLMSRSKA*VRLLSKLPEGQ
Trigger: CTGGCCTTCTGGAAGCTTGGAGAGGAGTCTTACCCAAGCTTTGCTCCTAGACATTAAACTTCCCAGCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559961.1
CDS CAA 72 bp TGTTGTCCTCAGAGCTCCCAAGCATGGCTAGACTCTTaGCAAACTGGGCTGTGTTCAGCGCTAGCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: CCPQSSQAWLDS*QTGLCSALALE
Trigger: TTCCAGAGCTAGCGCTGAACACAGCCCAGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559401.1
CDS GCA 72 bp CGGATCCCGCGGAGAAATAATTGTAAAGAGTCTCCGTaGTGGAGAACTCAAGATCTCCTTTCCCCTACCCCT +
Preference number: 6 (lower is better)
Translates to: RIPRRNNCKESP*WRTQDLLSPTP
Trigger: AGGGGTAGGGGAAAGGAGATCTTGAGTTCTCCAGCACGGAGACTCTTTACAATTATTTCTCCGCGGGATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560829.5
CDS CCA 72 bp GCCATTGTTGATGGGAAGAAGGGATGTAGTTATCTTTaGAGACTGATGTTTACTGACCACCGCGGCGCCGGT +
Preference number: 6 (lower is better)
Translates to: AIVDGKKGCSYL*RLMFTDHRGAG
Trigger: ACCGGCGCCGCGGTGGTCAGTAAACATCAGTCTCCAAAGATAACTACATCCCTTCTTCCCATCAACAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261889.9
ENST00000380285.7
ENST00000558040.5
ENST00000559389.1
ENST00000559844.6
ENST00000560260.5
ENST00000561026.5
ENST00000625244.2
CDS CCA 72 bp AGCTCCAATGCTTACCAGGTCAGGTGGGTATCCAAATaGGACTTGTCCTTAACAGGCCTACTGTGTGGATGC +
Preference number: 6 (lower is better)
Translates to: SSNAYQVRWVSK*DLSLTGLLCGC
Trigger: GCATCCACACAGTAGGCCTGTTAAGGACAAGTCCCATTTGGATACCCACCTGACCTGGTAAGCATTGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS CAA 72 bp AATGCTTACCAGGTCAGGTGGGTATCCAAATGGGACTaGTCCTTAACAGGCCTACTGTGTGGATGCCTTCAG +
Preference number: 6 (lower is better)
Translates to: NAYQVRWVSKWD*SLTGLLCGCLQ
Trigger: CTGAAGGCATCCACACAGTAGGCCTGTTAAGGACAAGTCCCATTTGGATACCCACCTGACCTGGTAAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS CAA 90 bp AGAAGCTCCAATGCTTACCAGGTCAGGTGGGTATCCAAATGGGACTaGTCCTTAACAGGCCTACTGTGTGGATGCCTTCAGGTCTTTAAG +
Preference number: 6 (lower is better)
Translates to: RSSNAYQVRWVSKWD*SLTGLLCGCLQVFK
Trigger: CTTAAAGACCTGAAGGCATCCACACAGTAGGCCTGTTAAGGACAAGTCCCATTTGGATACCCACCTGACCTGGTAAGCATTGGAGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558040.5
CDS CCA 72 bp ATCCCGCGGAGAAATAATTGTAAAGAGTCTCCGTGCTaGAGAACTCAAGATCTCCTTTCCCCTACCCCTTCA +
Preference number: 6 (lower is better)
Translates to: IPRRNNCKESPC*RTQDLLSPTPS
Trigger: TGAAGGGGTAGGGGAAAGGAGATCTTGAGTTCTCCAGCACGGAGACTCTTTACAATTATTTCTCCGCGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560829.5
CDS CAA 72 bp ACCTACTTCCTGTCCGATCAGGAAGTAAGAAAGACGTaGGCTGTCAGCGGATCCCGCGGAGAAATAATTGTA +
Preference number: 6 (lower is better)
Translates to: TYFLSDQEVRKT*AVSGSRGEIIV
Trigger: TACAATTATTTCTCCGCGGGATCCGCTGACAGCCAACGTCTTTCTTACTTCCTGATCGGACAGGAAGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560829.5
CDS CAA 90 bp GCAACTGAAACCTACTTCCTGTCCGATCAGGAAGTAAGAAAGACGTaGGCTGTCAGCGGATCCCGCGGAGAAATAATTGTAAAGAGTCTC +
Preference number: 6 (lower is better)
Translates to: ATETYFLSDQEVRKT*AVSGSRGEIIVKSL
Trigger: GAGACTCTTTACAATTATTTCTCCGCGGGATCCGCTGACAGCCAACGTCTTTCTTACTTCCTGATCGGACAGGAAGTAGGTTTCAGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560829.5
CDS GCA 72 bp CCTCATGCCAGTGACCAATACTATGGCTTACAGAAGTaGCTCCCTCAGATCAGTCAGTTCATAAGGCTACAT +
Preference number: 6 (lower is better)
Translates to: PHASDQYYGLQK*LPQISQFIRLH
Trigger: ATGTAGCCTTATGAACTGACTGATCTGAGGGAGGCACTTCTGTAAGCCATAGTATTGGTCACTGGCATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559961.1
CDS TCA 72 bp ACTGATGTTTACTCTGACTACCTCACTGGCTTCCCATaGCATCCCTTTTCACAGCAACTGAAACCTACTTCC +
Preference number: 6 (lower is better)
Translates to: TDVYSDYLTGFP*HPFSQQLKPTS
Trigger: GGAAGTAGGTTTCAGTTGCTGTGAAAAGGGATGTCATGGGAAGCCAGTGAGGTAGTCAGAGTAAACATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559061.5
ENST00000560829.5
CDS GCA 72 bp GTGTTTTGGCTAGCACCTTCTTCTGATTATTTTGTGTaGTGTCCAAGGATAGCTCCACTGTGGCATCTGCAA +
Preference number: 6 (lower is better)
Translates to: VFWLAPSSDYFV*CPRIAPLWHLQ
Trigger: TTGCAGATGCCACAGTGGAGCTATCCTTGGACAGCACACAAAATAATCAGAAGAAGGTGCTAGCCAAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261889.9
ENST00000559844.6
ENST00000560829.5
CDS CCA 72 bp AGAATACAGTGGATGAAACTCATGGTCCCATTTTCATaGAACTTGTCATCTAATGGAAAAGGCCAACATTAC +
Preference number: 6 (lower is better)
Translates to: RIQWMKLMVPFS*NLSSNGKGQHY
Trigger: GTAATGTTGGCCTTTTCCATTAGATGACAAGTTCCATGAAAATGGGACCATGAGTTTCATCCACTGTATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559961.1
CDS CAA 72 bp CAGTGGATGAAACTCATGGTCCCATTTTCATGGAACTaGTCATCTAATGGAAAAGGCCAACATTACATTTAC +
Preference number: 6 (lower is better)
Translates to: QWMKLMVPFSWN*SSNGKGQHYIY
Trigger: GTAAATGTAATGTTGGCCTTTTCCATTAGATGACAAGTTCCATGAAAATGGGACCATGAGTTTCATCCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559961.1