Pregenerated sensors for SNRPB2 (Homo sapiens)
Ensembl gene IDs: ENSG00000125870Ensembl transcript IDs: ENST00000246071.8, ENST00000377943.9
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGAGCCACCCTGGCTTTTCTGCTCCAATACAGCCACTCAAAGCATaGCCAGGACTGGGCATGGGATCAGTCTGTGAATTATTTTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: VSHPGFSAPIQPLKA*PGLGMGSVCELFSV Trigger: AACTGAAAATAATTCACAGACTGATCCCATGCCCAGTCCTGGCCATGCTTTGAGTGGCTGTATTGGAGCAGAAAAGCCAGGGTGGCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| 3UTR-3UTR GCA 90 bp | AAATTGTCCACTTCTGGAGATACCCATGGTTTACTCAGCAGAGGACTGAATCAAATCAAATTTAGATCCTaGCTGGGTCTCATTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: KLSTSGDTHGLLSRGLNQIKFRS*LGLIFF Trigger: GAAGAAAATGAGACCCAGGCAGGATCTAAATTTGAT...TTGATTCAGTCCTCTGCTGAGTAAACCATGGGTATCTCCAGAAGTGGACAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| 3UTR-3UTR GCA 90 bp | GAACAGTCCTGCCTCATGAAGGAAACAGCATTAAATGCAAAGTGTGAAGATAGCATCAAATTTAGATCCTaGCTGGGTCTCATTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: EQSCLMKETALNAKCEDSIKFRS*LGLIFF Trigger: GAAGAAAATGAGACCCAGGCAGGATCTAAATTTGAT...GCTATCTTCACACTTTGCATTTAATGCTGTTTCCTTCATGAGGCAGGACTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000246071.8 ENST00000377943.9 |
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| 3UTR-3UTR GCA 90 bp | TACCCATGGTTTACTCAGCAGAGGACTGAATCAATAGCCTTAAACATAAATCAAACCTTAGAACAGTCCTaGCTCATGAAGGAAACAGCA | + |
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Preference number: 2 (lower is better) Translates to: YPWFTQQRTESIALNINQTLEQS*LMKETA Trigger: TGCTGTTTCCTTCATGAGGCAGGACTGTTCTAAGGT...TTGATTTATGTTTAAGGCTATTGATTCAGTCCTCTGCTGAGTAAACCATGGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| 3UTR-3UTR CCA 90 bp | AAATTGTCCACTTCTGGAGATACCCATGGTTTACTCAGCAGAGGACTGAATCAATTGATGATAGGGAGATaGGTCAATCAAGAAAGCATT | + |
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Preference number: 2 (lower is better) Translates to: KLSTSGDTHGLLSRGLNQLMIGR*VNQESI Trigger: AATGCTTTCTTGATTGACCCATCTCCCTATCATCAA...TTGATTCAGTCCTCTGCTGAGTAAACCATGGGTATCTCCAGAAGTGGACAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| 3UTR-3UTR CCA 90 bp | GAACAGTCCTGCCTCATGAAGGAAACAGCATTAAATGCAAAGTGTGAAGATAGCTTGATGATAGGGAGATaGGTCAATCAAGAAAGCATT | + |
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Preference number: 2 (lower is better) Translates to: EQSCLMKETALNAKCEDSLMIGR*VNQESI Trigger: AATGCTTTCTTGATTGACCCATCTCCCTATCATCAA...GCTATCTTCACACTTTGCATTTAATGCTGTTTCCTTCATGAGGCAGGACTGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246071.8 ENST00000377943.9 |
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| 3UTR-3UTR CCA 90 bp | GAACAGTCCTGCCTCATGAAGGAAACAGCATTAAATGCAAAGTGTGAAGATAGCAATTTAGATCCTGCCTaGGTCTCATTTTCTTCTAAT | + |
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Preference number: 2 (lower is better) Translates to: EQSCLMKETALNAKCEDSNLDPA*VSFSSN Trigger: ATTAGAAGAAAATGAGACCCAGGCAGGATCTAAATT...GCTATCTTCACACTTTGCATTTAATGCTGTTTCCTTCATGAGGCAGGACTGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000246071.8 ENST00000377943.9 |
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| 3UTR GCA 72 bp | CTCATTCTCACCCCAGGTGAGCCACCCTGGCTTTTCTaGTCCAATACAGCCACTCAAAGCATGGCCAGGACT | + |
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Preference number: 3 (lower is better) Translates to: LILTPGEPPWLF*SNTATQSMART Trigger: AGTCCTGGCCATGCTTTGAGTGGCTGTATTGGAGCAGAAAAGCCAGGGTGGCTCACCTGGGGTGAGAATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| 3UTR CCA 72 bp | CCTGGCTTTTCTGCTCCAATACAGCCACTCAAAGCATaGCCAGGACTGGGCATGGGATCAGTCTGTGAATTA | + |
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Preference number: 3 (lower is better) Translates to: PGFSAPIQPLKA*PGLGMGSVCEL Trigger: TAATTCACAGACTGATCCCATGCCCAGTCCTGGCCATGCTTTGAGTGGCTGTATTGGAGCAGAAAAGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| 3UTR CCA 72 bp | CTGCTCCAATACAGCCACTCAAAGCATGGCCAGGACTaGGCATGGGATCAGTCTGTGAATTATTTTCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: LLQYSHSKHGQD*AWDQSVNYFQF Trigger: GAACTGAAAATAATTCACAGACTGATCCCATGCCCAGTCCTGGCCATGCTTTGAGTGGCTGTATTGGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| 3UTR-3UTR CAA 90 bp | TTTTCTGCTCCAATACAGCCACTCAAAGCATGGCCAGGACTGGGCATGGGATCAACTTGTAAAAACAAATaGTCCACTTCTGGAGATACC | + |
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Preference number: 3 (lower is better) Translates to: FSAPIQPLKAWPGLGMGSTCKNK*STSGDT Trigger: GGTATCTCCAGAAGTGGACAATTTGTTTTTACAAGT...TGATCCCATGCCCAGTCCTGGCCATGCTTTGAGTGGCTGTATTGGAGCAGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| 3UTR CCA 72 bp | CAATACAGCCACTCAAAGCATGGCCAGGACTGGGCATaGGATCAGTCTGTGAATTATTTTCAGTTCTTAGAC | + |
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Preference number: 3 (lower is better) Translates to: QYSHSKHGQDWA*DQSVNYFQFLD Trigger: GTCTAAGAACTGAAAATAATTCACAGACTGATCCCATGCCCAGTCCTGGCCATGCTTTGAGTGGCTGTATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| CDS-3UTR TCA 90 bp | CTGGCTTTTCTGCTCCAATACAGCCACTCAAAGCATGGCCAGGACTGGGCATGGAGTATAAGCAAATCCTaGAGAAGACCTACACGACCC | + |
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Preference number: 4 (lower is better) Translates to: LAFLLQYSHSKHGQDWAWSISKS*RRPTRP Trigger: GGGTCGTGTAGGTCTTCTTCAGGATTTGCTTATACT...CCATGCCCAGTCCTGGCCATGCTTTGAGTGGCTGTATTGGAGCAGAAAAGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| CDS-3UTR CCA 90 bp | GAACAGTCCTGCCTCATGAAGGAAACAGCATTAAATGCAAAGTGTGAAGATAGCCAGCCACTCAAAGCATaGCCAGGACTGGGCATGGGA | + |
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Preference number: 4 (lower is better) Translates to: EQSCLMKETALNAKCEDSQPLKA*PGLGMG Trigger: TCCCATGCCCAGTCCTGGCCATGCTTTGAGTGGCTG...GCTATCTTCACACTTTGCATTTAATGCTGTTTCCTTCATGAGGCAGGACTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTGCTCCAATACAGCCACTCAAAGCATGGCCAGGACTGGGCATGGGATCATTGAAGCCAGGGAACTaGTTAAACAGCATGGATAAC | + |
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Preference number: 4 (lower is better) Translates to: FSAPIQPLKAWPGLGMGSLKPGN*LNSMDN Trigger: GTTATCCATGCTGTTTAATCAGTTCCCTGGCTTCAA...TGATCCCATGCCCAGTCCTGGCCATGCTTTGAGTGGCTGTATTGGAGCAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| CDS-3UTR GCA 90 bp | TACCATACTTGTAAAAACAAATTGTCCACTTCTGGAGATACCCATGGTTTACTCTCGTCCGCTCCCAGCTaGAACAGGGGAGAAAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: YHTCKNKLSTSGDTHGLLSSAPS*NRGEKG Trigger: GCCCTTTTCTCCCCTGTTGCAGCTGGGAGCGGACGA...GAGTAAACCATGGGTATCTCCAGAAGTGGACAATTTGTTTTTACAAGTATGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| CDS-3UTR TCA 90 bp | TACCCATGGTTTACTCAGCAGAGGACTGAATCAATAGCCTTAAACATAAATCAACATTCTCACCCCAGGTaGGCCACCCTGGCTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: YPWFTQQRTESIALNINQHSHPR*ATLAFL Trigger: CAGAAAAGCCAGGGTGGCTCACCTGGGGTGAGAATG...TTGATTTATGTTTAAGGCTATTGATTCAGTCCTCTGCTGAGTAAACCATGGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| CDS-3UTR GCA 90 bp | GAACAGTCCTGCCTCATGAAGGAAACAGCATTAAATGCAAAGTGTGAAGATAGCACCTTAGAACAGTCCTaGCTCATGAAGGAAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: EQSCLMKETALNAKCEDSTLEQS*LMKETA Trigger: TGCTGTTTCCTTCATGAGGCAGGACTGTTCTAAGGT...GCTATCTTCACACTTTGCATTTAATGCTGTTTCCTTCATGAGGCAGGACTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246071.8 ENST00000377943.9 |
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| CDS-3UTR CCA 90 bp | AAATTGTCCACTTCTGGAGATACCCATGGTTTACTCAGCAGAGGACTGAATCAAGAATTTGGAGTTCCCTaGCCAGGCTTTTTGTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: KLSTSGDTHGLLSRGLNQEFGVP*PGFLFV Trigger: CACAAACAAAAAGCCTGGCCAGGGAACTCCAAATTC...TTGATTCAGTCCTCTGCTGAGTAAACCATGGGTATCTCCAGAAGTGGACAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| CDS-3UTR CCA 90 bp | TACCATACTTGTAAAAACAAATTGTCCACTTCTGGAGATACCCATGGTTTACTCGGCCAGGACTGGGCATaGGATCAGTCTGTGAATTAT | + |
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Preference number: 4 (lower is better) Translates to: YHTCKNKLSTSGDTHGLLGQDWA*DQSVNY Trigger: ATAATTCACAGACTGATCCCATGCCCAGTCCTGGCC...GAGTAAACCATGGGTATCTCCAGAAGTGGACAATTTGTTTTTACAAGTATGGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| CDS-3UTR CCA 90 bp | GAACAGTCCTGCCTCATGAAGGAAACAGCATTAAATGCAAAGTGTGAAGATAGCCAAATTGTCCACTTCTaGAGATACCCATGGTTTACT | + |
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Preference number: 4 (lower is better) Translates to: EQSCLMKETALNAKCEDSQIVHF*RYPWFT Trigger: AGTAAACCATGGGTATCTCCAGAAGTGGACAATTTG...GCTATCTTCACACTTTGCATTTAATGCTGTTTCCTTCATGAGGCAGGACTGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| CDS-3UTR CCA 90 bp | TACCCAGAACAATCATTGTTACCATTAATACAACAGTCATCTACTAGCTTCTGTGAATTTGGAGTTCCCTaGCCAGGCTTTTTGTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: YPEQSLLPLIQQSSTSFCEFGVP*PGFLFV Trigger: CACAAACAAAAAGCCTGGCCAGGGAACTCCAAATTC...ACAGAAGCTAGTAGATGACTGTTGTATTAATGGTAACAATGATTGTTCTGGGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000246071.8 ENST00000377943.9 |
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| CDS-3UTR CCA 90 bp | AAATTGTCCACTTCTGGAGATACCCATGGTTTACTCAGCAGAGGACTGAATCAAAATTTAGATCCTGCCTaGGTCTCATTTTCTTCTAAT | + |
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Preference number: 4 (lower is better) Translates to: KLSTSGDTHGLLSRGLNQNLDPA*VSFSSN Trigger: ATTAGAAGAAAATGAGACCCAGGCAGGATCTAAATT...TTGATTCAGTCCTCTGCTGAGTAAACCATGGGTATCTCCAGAAGTGGACAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| CDS-3UTR TCA 90 bp | TACCCAGAACAATCATTGTTACCATTAATACAACAGTCATCTACTAGCTTCTGTTTGAAGCCAGGGAACTaGTTAAACAGCATGGATAAC | + |
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Preference number: 4 (lower is better) Translates to: YPEQSLLPLIQQSSTSFCLKPGN*LNSMDN Trigger: GTTATCCATGCTGTTTAATCAGTTCCCTGGCTTCAA...ACAGAAGCTAGTAGATGACTGTTGTATTAATGGTAACAATGATTGTTCTGGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246071.8 ENST00000377943.9 |
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| CDS-3UTR GCA 90 bp | TACCCATGGTTTACTCAGCAGAGGACTGAATCAATAGCCTTAAACATAAATCAAATCAAATTTAGATCCTaGCTGGGTCTCATTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: YPWFTQQRTESIALNINQIKFRS*LGLIFF Trigger: GAAGAAAATGAGACCCAGGCAGGATCTAAATTTGAT...TTGATTTATGTTTAAGGCTATTGATTCAGTCCTCTGCTGAGTAAACCATGGGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| CDS-3UTR CCA 90 bp | TACCCATGGTTTACTCAGCAGAGGACTGAATCAATAGCCTTAAACATAAATCAATTGATGATAGGGAGATaGGTCAATCAAGAAAGCATT | + |
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Preference number: 4 (lower is better) Translates to: YPWFTQQRTESIALNINQLMIGR*VNQESI Trigger: AATGCTTTCTTGATTGACCCATCTCCCTATCATCAA...TTGATTTATGTTTAAGGCTATTGATTCAGTCCTCTGCTGAGTAAACCATGGGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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| CDS-3UTR CCA 90 bp | TACCCAGAACAATCATTGTTACCATTAATACAACAGTCATCTACTAGCTTCTGTTTGATGATAGGGAGATaGGTCAATCAAGAAAGCATT | + |
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Preference number: 4 (lower is better) Translates to: YPEQSLLPLIQQSSTSFCLMIGR*VNQESI Trigger: AATGCTTTCTTGATTGACCCATCTCCCTATCATCAA...ACAGAAGCTAGTAGATGACTGTTGTATTAATGGTAACAATGATTGTTCTGGGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246071.8 ENST00000377943.9 |
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| 3UTR CAA 72 bp | AAAAATTTTTACCCTGGAGGTCTTTCAATAAAGAGATaGCATATTAACCTTAGAACAGTCCTGCCTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: KNFYPGGLSIKR*HINLRTVLPHE Trigger: TTCATGAGGCAGGACTGTTCTAAGGTTAATATGCAATCTCTTTATTGAAAGACCTCCAGGGTAAAAATTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000246071.8 ENST00000377943.9 |
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| CDS-3UTR CAA 90 bp | GAACAGTCCTGCCTCATGAAGGAAACAGCATTAAATGCAAAGTGTGAAGATAGCACTTGTAAAAACAAATaGTCCACTTCTGGAGATACC | + |
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Preference number: 5 (lower is better) Translates to: EQSCLMKETALNAKCEDSTCKNK*STSGDT Trigger: GGTATCTCCAGAAGTGGACAATTTGTTTTTACAAGT...GCTATCTTCACACTTTGCATTTAATGCTGTTTCCTTCATGAGGCAGGACTGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000246071.8 |
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