Pregenerated sensors for SNORD125 (Homo sapiens)

Ensembl gene IDs: ENSG00000239127

Ensembl transcript IDs: ENST00000459538.1

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AGCAGCCCCTTCAGTCAACTTCTTAGAGGCTCAGTTTGCTCATCATaGGCGTGCTCAGGAAGAAGAATCATCAGGAGGGGCTGCCAGGGG	+
Preference number: 5 (lower is better) Translates to: SSPFSQLLRGSVCSS*ACSGRRIIRRGCQG Trigger: CCCCTGGCAGCCCCTCCTGATGATTCTTCTTCCTGAGCACGCTCATGATGAGCAAACTGAGCCTCTAAGAAGTTGACTGAAGGGGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000459538.1
CDS TCA 72 bp	TTCAGTCAACTTCTTAGAGGCTCAGTTTGCTCATCATaGGCGTGCTCAGGAAGAAGAATCATCAGGAGGGGC	+
Preference number: 6 (lower is better) Translates to: FSQLLRGSVCSS*ACSGRRIIRRG Trigger: GCCCCTCCTGATGATTCTTCTTCCTGAGCACGCTCATGATGAGCAAACTGAGCCTCTAAGAAGTTGACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000459538.1

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu