Pregenerated sensors for SNHG32 (Homo sapiens)
Ensembl gene IDs: ENSG00000204387, ENSG00000206380, ENSG00000229300, ENSG00000234728Ensembl transcript IDs: ENST00000375633.5, ENST00000375635.6, ENST00000375638.7, ENST00000375640.7, ENST00000375641.6, ENST00000375642.6, ENST00000383383.6, ENST00000383384.6, ENST00000383385.6, ENST00000395788.3, ENST00000395789.5, ENST00000400034.5, ENST00000400035.5, ENST00000400037.5, ENST00000400038.5, ENST00000400039.3, ENST00000413638.5, ENST00000414434.6, ENST00000414536.6, ENST00000416886.5, ENST00000421039.2, ENST00000421605.5, ENST00000423640.6, ENST00000423916.5, ENST00000424962.6, ENST00000426843.5, ENST00000430690.5, ENST00000433697.5, ENST00000433752.6, ENST00000435938.5, ENST00000436205.2, ENST00000436495.5, ENST00000436558.5, ENST00000439865.5, ENST00000439907.2, ENST00000440361.5, ENST00000443974.5, ENST00000444192.5, ENST00000444331.5, ENST00000444974.6, ENST00000450610.6, ENST00000456268.5, ENST00000456690.5, ENST00000458514.5, ENST00000549426.2, ENST00000550492.2, ENST00000550685.2, ENST00000552514.2, ENST00000614363.4, ENST00000648677.1
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACTGCACTGGGGACCGCCCTCTCCTACCCCAGCCAGGCCGCGACGTaGCCGCCCGCCGGCTGCTGCGCAAAGGCAGCGCAAGCCGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: TALGTALSYPSQAAT*PPAGCCAKAAQAVG Trigger: CCCAACGGCTTGCGCTGCCTTTGCGCAGCAGCCGGCGGGCGGCCACGTCGCGGCCTGGCTGGGGTAGGAGAGGGCGGTCCCCAGTGCAGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 30 transcripts: ENST00000375638.7 ENST00000375640.7 ENST00000375642.6 ENST00000383383.6 ENST00000383385.6 ENST00000395789.5 ENST00000400035.5 ENST00000400037.5 ENST00000413638.5 ENST00000414434.6 ENST00000414536.6 ENST00000423640.6 ENST00000423916.5 ENST00000424962.6 ENST00000430690.5 ENST00000433752.6 ENST00000435938.5 ENST00000436495.5 ENST00000436558.5 ENST00000440361.5 ENST00000443974.5 ENST00000444331.5 ENST00000444974.6 ENST00000450610.6 ENST00000549426.2 ENST00000550492.2 ENST00000550685.2 ENST00000552514.2 ENST00000614363.4 ENST00000648677.1 |
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| CDS CCA 90 bp | GACGTGGCCGCCCGCCGGCTGCTGCGCAAAGGCAGCGCAAGCCGTTaGGATCCCCTGCTCCCCCTCACTCAACAGTCGGGCCATTACAAC | + |
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Preference number: 5 (lower is better) Translates to: DVAARRLLRKGSASR*DPLLPLTQQSGHYN Trigger: GTTGTAATGGCCCGACTGTTGAGTGAGGGGGAGCAGGGGATCCCAACGGCTTGCGCTGCCTTTGCGCAGCAGCCGGCGGGCGGCCACGTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 35 transcripts: ENST00000375635.6 ENST00000375638.7 ENST00000375640.7 ENST00000375642.6 ENST00000383383.6 ENST00000383384.6 ENST00000383385.6 ENST00000395789.5 ENST00000400035.5 ENST00000400037.5 ENST00000413638.5 ENST00000414434.6 ENST00000414536.6 ENST00000421605.5 ENST00000423640.6 ENST00000423916.5 ENST00000424962.6 ENST00000430690.5 ENST00000433752.6 ENST00000435938.5 ENST00000436495.5 ENST00000436558.5 ENST00000440361.5 ENST00000443974.5 ENST00000444192.5 ENST00000444331.5 ENST00000444974.6 ENST00000450610.6 ENST00000458514.5 ENST00000549426.2 ENST00000550492.2 ENST00000550685.2 ENST00000552514.2 ENST00000614363.4 ENST00000648677.1 |
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| CDS GCA 90 bp | CCCGCCGGCTGCTGCGCAAAGGCAGCGCAAGCCGTTGGGATCCCCTaGTCCCCCTCACTCAACAGTCGGGCCATTACAACTCTCATACTG | + |
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Preference number: 5 (lower is better) Translates to: PAGCCAKAAQAVGIP*SPSLNSRAITTLIL Trigger: CAGTATGAGAGTTGTAATGGCCCGACTGTTGAGTGAGGGGGAGCAGGGGATCCCAACGGCTTGCGCTGCCTTTGCGCAGCAGCCGGCGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 35 transcripts: ENST00000375635.6 ENST00000375638.7 ENST00000375640.7 ENST00000375642.6 ENST00000383383.6 ENST00000383384.6 ENST00000383385.6 ENST00000395789.5 ENST00000400035.5 ENST00000400037.5 ENST00000413638.5 ENST00000414434.6 ENST00000414536.6 ENST00000421605.5 ENST00000423640.6 ENST00000423916.5 ENST00000424962.6 ENST00000430690.5 ENST00000433752.6 ENST00000435938.5 ENST00000436495.5 ENST00000436558.5 ENST00000440361.5 ENST00000443974.5 ENST00000444192.5 ENST00000444331.5 ENST00000444974.6 ENST00000450610.6 ENST00000458514.5 ENST00000549426.2 ENST00000550492.2 ENST00000550685.2 ENST00000552514.2 ENST00000614363.4 ENST00000648677.1 |
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| CDS GCA 90 bp | GCAAAGACACCAGAAACTCCAGTGTGCAACGGTAGTTCACCCAACTaGACTGGGGACCGCCCTCTCCTACCCCAGCCAGGCCGCGACGTG | + |
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Preference number: 5 (lower is better) Translates to: AKTPETPVCNGSSPN*TGDRPLLPQPGRDV Trigger: CACGTCGCGGCCTGGCTGGGGTAGGAGAGGGCGGTCCCCAGTGCAGTTGGGTGAACTACCGTTGCACACTGGAGTTTCTGGTGTCTTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 30 transcripts: ENST00000375638.7 ENST00000375640.7 ENST00000375642.6 ENST00000383383.6 ENST00000383385.6 ENST00000395789.5 ENST00000400035.5 ENST00000400037.5 ENST00000413638.5 ENST00000414434.6 ENST00000414536.6 ENST00000423640.6 ENST00000423916.5 ENST00000424962.6 ENST00000430690.5 ENST00000433752.6 ENST00000435938.5 ENST00000436495.5 ENST00000436558.5 ENST00000440361.5 ENST00000443974.5 ENST00000444331.5 ENST00000444974.6 ENST00000450610.6 ENST00000549426.2 ENST00000550492.2 ENST00000550685.2 ENST00000552514.2 ENST00000614363.4 ENST00000648677.1 |
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| CDS GCA 90 bp | CACGAGCTAGGTCAGTTCCAAGCAAAGACACCAGAAACTCCAGTGTaGAACGGTAGTTCACCCAACTGCACTGGGGACCGCCCTCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: HELGQFQAKTPETPV*NGSSPNCTGDRPLL Trigger: TAGGAGAGGGCGGTCCCCAGTGCAGTTGGGTGAACTACCGTTGCACACTGGAGTTTCTGGTGTCTTTGCTTGGAACTGACCTAGCTCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 30 transcripts: ENST00000375638.7 ENST00000375640.7 ENST00000375642.6 ENST00000383383.6 ENST00000383385.6 ENST00000395789.5 ENST00000400035.5 ENST00000400037.5 ENST00000413638.5 ENST00000414434.6 ENST00000414536.6 ENST00000423640.6 ENST00000423916.5 ENST00000424962.6 ENST00000430690.5 ENST00000433752.6 ENST00000435938.5 ENST00000436495.5 ENST00000436558.5 ENST00000440361.5 ENST00000443974.5 ENST00000444331.5 ENST00000444974.6 ENST00000450610.6 ENST00000549426.2 ENST00000550492.2 ENST00000550685.2 ENST00000552514.2 ENST00000614363.4 ENST00000648677.1 |
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| CDS GCA 90 bp | AGGAAGCTGAGGTGGAAAGACCACTTGAGCCCTGACGGTGGATGTTaGAGGGAGATCCTGGCATTGCGCCCTTTACTCAAGGATAACACG | + |
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Preference number: 5 (lower is better) Translates to: RKLRWKDHLSPDGGC*REILALRPLLKDNT Trigger: CGTGTTATCCTTGAGTAAAGGGCGCAATGCCAGGATCTCCCTGCAACATCCACCGTCAGGGCTCAAGTGGTCTTTCCACCTCAGCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000375642.6 ENST00000400037.5 ENST00000423916.5 ENST00000430690.5 ENST00000440361.5 |
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| CDS GCA 72 bp | CCCAGCCAGGCCGCGACGTGGCCGCCCGCCGGCTGCTaGGCAAAGGCAGCGCAAGCCGTTGGGATCCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PSQAATWPPAGC*AKAAQAVGIPC Trigger: GCAGGGGATCCCAACGGCTTGCGCTGCCTTTGCGCAGCAGCCGGCGGGCGGCCACGTCGCGGCCTGGCTGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 35 transcripts: ENST00000375635.6 ENST00000375638.7 ENST00000375640.7 ENST00000375642.6 ENST00000383383.6 ENST00000383384.6 ENST00000383385.6 ENST00000395789.5 ENST00000400035.5 ENST00000400037.5 ENST00000413638.5 ENST00000414434.6 ENST00000414536.6 ENST00000421605.5 ENST00000423640.6 ENST00000423916.5 ENST00000424962.6 ENST00000430690.5 ENST00000433752.6 ENST00000435938.5 ENST00000436495.5 ENST00000436558.5 ENST00000440361.5 ENST00000443974.5 ENST00000444192.5 ENST00000444331.5 ENST00000444974.6 ENST00000450610.6 ENST00000458514.5 ENST00000549426.2 ENST00000550492.2 ENST00000550685.2 ENST00000552514.2 ENST00000614363.4 ENST00000648677.1 |
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| CDS CCA 72 bp | GGGACCGCCCTCTCCTACCCCAGCCAGGCCGCGACGTaGCCGCCCGCCGGCTGCTGCGCAAAGGCAGCGCAA | + |
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Preference number: 6 (lower is better) Translates to: GTALSYPSQAAT*PPAGCCAKAAQ Trigger: TTGCGCTGCCTTTGCGCAGCAGCCGGCGGGCGGCCACGTCGCGGCCTGGCTGGGGTAGGAGAGGGCGGTCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 30 transcripts: ENST00000375638.7 ENST00000375640.7 ENST00000375642.6 ENST00000383383.6 ENST00000383385.6 ENST00000395789.5 ENST00000400035.5 ENST00000400037.5 ENST00000413638.5 ENST00000414434.6 ENST00000414536.6 ENST00000423640.6 ENST00000423916.5 ENST00000424962.6 ENST00000430690.5 ENST00000433752.6 ENST00000435938.5 ENST00000436495.5 ENST00000436558.5 ENST00000440361.5 ENST00000443974.5 ENST00000444331.5 ENST00000444974.6 ENST00000450610.6 ENST00000549426.2 ENST00000550492.2 ENST00000550685.2 ENST00000552514.2 ENST00000614363.4 ENST00000648677.1 |
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| CDS CCA 72 bp | GCCCGCCGGCTGCTGCGCAAAGGCAGCGCAAGCCGTTaGGATCCCCTGCTCCCCCTCACTCAACAGTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ARRLLRKGSASR*DPLLPLTQQSG Trigger: GCCCGACTGTTGAGTGAGGGGGAGCAGGGGATCCCAACGGCTTGCGCTGCCTTTGCGCAGCAGCCGGCGGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 35 transcripts: ENST00000375635.6 ENST00000375638.7 ENST00000375640.7 ENST00000375642.6 ENST00000383383.6 ENST00000383384.6 ENST00000383385.6 ENST00000395789.5 ENST00000400035.5 ENST00000400037.5 ENST00000413638.5 ENST00000414434.6 ENST00000414536.6 ENST00000421605.5 ENST00000423640.6 ENST00000423916.5 ENST00000424962.6 ENST00000430690.5 ENST00000433752.6 ENST00000435938.5 ENST00000436495.5 ENST00000436558.5 ENST00000440361.5 ENST00000443974.5 ENST00000444192.5 ENST00000444331.5 ENST00000444974.6 ENST00000450610.6 ENST00000458514.5 ENST00000549426.2 ENST00000550492.2 ENST00000550685.2 ENST00000552514.2 ENST00000614363.4 ENST00000648677.1 |
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| CDS CAA 72 bp | CGCCCGCCGGCTGCTGCGCAAAGGCAGCGCAAGCCGTaGGGATCCCCTGCTCCCCCTCACTCAACAGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: RPPAAAQRQRKP*GSPAPPHSTVG Trigger: CCCGACTGTTGAGTGAGGGGGAGCAGGGGATCCCAACGGCTTGCGCTGCCTTTGCGCAGCAGCCGGCGGGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 35 transcripts: ENST00000375635.6 ENST00000375638.7 ENST00000375640.7 ENST00000375642.6 ENST00000383383.6 ENST00000383384.6 ENST00000383385.6 ENST00000395789.5 ENST00000400035.5 ENST00000400037.5 ENST00000413638.5 ENST00000414434.6 ENST00000414536.6 ENST00000421605.5 ENST00000423640.6 ENST00000423916.5 ENST00000424962.6 ENST00000430690.5 ENST00000433752.6 ENST00000435938.5 ENST00000436495.5 ENST00000436558.5 ENST00000440361.5 ENST00000443974.5 ENST00000444192.5 ENST00000444331.5 ENST00000444974.6 ENST00000450610.6 ENST00000458514.5 ENST00000549426.2 ENST00000550492.2 ENST00000550685.2 ENST00000552514.2 ENST00000614363.4 ENST00000648677.1 |
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| CDS CAA 90 bp | CGACGTGGCCGCCCGCCGGCTGCTGCGCAAAGGCAGCGCAAGCCGTaGGGATCCCCTGCTCCCCCTCACTCAACAGTCGGGCCATTACAA | + |
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Preference number: 6 (lower is better) Translates to: RRGRPPAAAQRQRKP*GSPAPPHSTVGPLQ Trigger: TTGTAATGGCCCGACTGTTGAGTGAGGGGGAGCAGGGGATCCCAACGGCTTGCGCTGCCTTTGCGCAGCAGCCGGCGGGCGGCCACGTCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 35 transcripts: ENST00000375635.6 ENST00000375638.7 ENST00000375640.7 ENST00000375642.6 ENST00000383383.6 ENST00000383384.6 ENST00000383385.6 ENST00000395789.5 ENST00000400035.5 ENST00000400037.5 ENST00000413638.5 ENST00000414434.6 ENST00000414536.6 ENST00000421605.5 ENST00000423640.6 ENST00000423916.5 ENST00000424962.6 ENST00000430690.5 ENST00000433752.6 ENST00000435938.5 ENST00000436495.5 ENST00000436558.5 ENST00000440361.5 ENST00000443974.5 ENST00000444192.5 ENST00000444331.5 ENST00000444974.6 ENST00000450610.6 ENST00000458514.5 ENST00000549426.2 ENST00000550492.2 ENST00000550685.2 ENST00000552514.2 ENST00000614363.4 ENST00000648677.1 |
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| CDS CCA 72 bp | ATGAACGTCTTACAACTCCCCAGCCAGGCCGCGACGTaGCCGCCCGCCGGCTGCTGCGCAAAGGCAGCGCAA | + |
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Preference number: 6 (lower is better) Translates to: MNVLQLPSQAAT*PPAGCCAKAAQ Trigger: TTGCGCTGCCTTTGCGCAGCAGCCGGCGGGCGGCCACGTCGCGGCCTGGCTGGGGAGTTGTAAGACGTTCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000375635.6 ENST00000383384.6 ENST00000421605.5 ENST00000444192.5 ENST00000458514.5 |
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| CDS GCA 72 bp | TGCTGCGCAAAGGCAGCGCAAGCCGTTGGGATCCCCTaGTCCCCCTCACTCAACAGTCGGGCCATTACAACT | + |
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Preference number: 6 (lower is better) Translates to: CCAKAAQAVGIP*SPSLNSRAITT Trigger: AGTTGTAATGGCCCGACTGTTGAGTGAGGGGGAGCAGGGGATCCCAACGGCTTGCGCTGCCTTTGCGCAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 35 transcripts: ENST00000375635.6 ENST00000375638.7 ENST00000375640.7 ENST00000375642.6 ENST00000383383.6 ENST00000383384.6 ENST00000383385.6 ENST00000395789.5 ENST00000400035.5 ENST00000400037.5 ENST00000413638.5 ENST00000414434.6 ENST00000414536.6 ENST00000421605.5 ENST00000423640.6 ENST00000423916.5 ENST00000424962.6 ENST00000430690.5 ENST00000433752.6 ENST00000435938.5 ENST00000436495.5 ENST00000436558.5 ENST00000440361.5 ENST00000443974.5 ENST00000444192.5 ENST00000444331.5 ENST00000444974.6 ENST00000450610.6 ENST00000458514.5 ENST00000549426.2 ENST00000550492.2 ENST00000550685.2 ENST00000552514.2 ENST00000614363.4 ENST00000648677.1 |
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| CDS CAA 90 bp | GTAGCACGTGCCTGCAGTCCCAGGAAGCTGAGGTGGAAAGACCACTaGAGCCCTGACGGTGGATGTTGCAGGGAGATCCTGGCATTGCGC | + |
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Preference number: 6 (lower is better) Translates to: VARACSPRKLRWKDH*SPDGGCCREILALR Trigger: GCGCAATGCCAGGATCTCCCTGCAACATCCACCGTCAGGGCTCAAGTGGTCTTTCCACCTCAGCTTCCTGGGACTGCAGGCACGTGCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000375642.6 ENST00000395789.5 ENST00000400035.5 ENST00000400037.5 ENST00000423916.5 ENST00000430690.5 ENST00000436495.5 ENST00000436558.5 ENST00000440361.5 ENST00000443974.5 |
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| CDS CCA 72 bp | GTGGTAGCACGTGCCTGCAGTCCCAGGAAGCTGAGGTaGAAAGACCACTTGAGCCCTGACGGTGGATGTTGC | + |
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Preference number: 6 (lower is better) Translates to: VVARACSPRKLR*KDHLSPDGGCC Trigger: GCAACATCCACCGTCAGGGCTCAAGTGGTCTTTCCACCTCAGCTTCCTGGGACTGCAGGCACGTGCTACCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000375642.6 ENST00000395789.5 ENST00000400035.5 ENST00000400037.5 ENST00000423916.5 ENST00000430690.5 ENST00000436495.5 ENST00000436558.5 ENST00000440361.5 ENST00000443974.5 |
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| CDS TCA 72 bp | TCCCAGGAAGCTGAGGTGGAAAGACCACTTGAGCCCTaGCGGTGGATGTTGCAGGGAGATCCTGGCATTGCG | + |
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Preference number: 6 (lower is better) Translates to: SQEAEVERPLEP*RWMLQGDPGIA Trigger: CGCAATGCCAGGATCTCCCTGCAACATCCACCGTCAGGGCTCAAGTGGTCTTTCCACCTCAGCTTCCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000375642.6 ENST00000395789.5 ENST00000400035.5 ENST00000400037.5 ENST00000423916.5 ENST00000430690.5 ENST00000436495.5 ENST00000436558.5 ENST00000440361.5 ENST00000443974.5 |
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| CDS GCA 72 bp | GCCCTGACGGTGGATGTTGCAGGGAGATCCTGGCATTaGGCCCTGTCTTTACTCAAGGATAACACGGCGATG | + |
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Preference number: 6 (lower is better) Translates to: ALTVDVAGRSWH*ALSLLKDNTAM Trigger: CATCGCCGTGTTATCCTTGAGTAAAGACAGGGCGCAATGCCAGGATCTCCCTGCAACATCCACCGTCAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000395789.5 ENST00000400035.5 ENST00000436495.5 ENST00000436558.5 ENST00000443974.5 |
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| CDS GCA 72 bp | GGTCAGTTCCAAGCAAAGACACCAGAAACTCCAGTGTaGAACGGTAGTTCACCCAACTGCACTGGGGACCGC | + |
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Preference number: 6 (lower is better) Translates to: GQFQAKTPETPV*NGSSPNCTGDR Trigger: GCGGTCCCCAGTGCAGTTGGGTGAACTACCGTTGCACACTGGAGTTTCTGGTGTCTTTGCTTGGAACTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 30 transcripts: ENST00000375638.7 ENST00000375640.7 ENST00000375642.6 ENST00000383383.6 ENST00000383385.6 ENST00000395789.5 ENST00000400035.5 ENST00000400037.5 ENST00000413638.5 ENST00000414434.6 ENST00000414536.6 ENST00000423640.6 ENST00000423916.5 ENST00000424962.6 ENST00000430690.5 ENST00000433752.6 ENST00000435938.5 ENST00000436495.5 ENST00000436558.5 ENST00000440361.5 ENST00000443974.5 ENST00000444331.5 ENST00000444974.6 ENST00000450610.6 ENST00000549426.2 ENST00000550492.2 ENST00000550685.2 ENST00000552514.2 ENST00000614363.4 ENST00000648677.1 |
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| CDS GCA 72 bp | AGGTGGAAAGACCACTTGAGCCCTGACGGTGGATGTTaGAGGGAGATCCTGGCATTGCGCCCTTTACTCAAG | + |
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Preference number: 6 (lower is better) Translates to: RWKDHLSPDGGC*REILALRPLLK Trigger: CTTGAGTAAAGGGCGCAATGCCAGGATCTCCCTGCAACATCCACCGTCAGGGCTCAAGTGGTCTTTCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000375642.6 ENST00000400037.5 ENST00000423916.5 ENST00000430690.5 ENST00000440361.5 |
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| CDS CAA 90 bp | GACCACTTGAGCCCTGACGGTGGATGTTGCAGGGAGATCCTGGCATaGCGCCCTTTACTCAAGGATAACACGGCGATGAACGTCTTACAA | + |
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Preference number: 6 (lower is better) Translates to: DHLSPDGGCCREILA*RPLLKDNTAMNVLQ Trigger: TTGTAAGACGTTCATCGCCGTGTTATCCTTGAGTAAAGGGCGCAATGCCAGGATCTCCCTGCAACATCCACCGTCAGGGCTCAAGTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000375642.6 ENST00000400037.5 ENST00000423916.5 ENST00000430690.5 ENST00000440361.5 |
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| CDS TCA 72 bp | CCAGAGTTCATTCTTTACTCAAGGATAACACGGCGATaGACGTCTTACAACTCCCCAGCCAGGCCGCGACGT | + |
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Preference number: 6 (lower is better) Translates to: PEFILYSRITRR*TSYNSPARPRR Trigger: ACGTCGCGGCCTGGCTGGGGAGTTGTAAGACGTTCATCGCCGTGTTATCCTTGAGTAAAGAATGAACTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000375635.6 ENST00000383384.6 ENST00000421605.5 ENST00000444192.5 ENST00000458514.5 |
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| CDS CAA 72 bp | GCATGGCTCTCCACCTCTCCCAGCCTGAAGGTCAAGTaGCAGGAATCACTGTCTAAGCATGACAGCCATACA | + |
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Preference number: 6 (lower is better) Translates to: AWLSTSPSLKVK*QESLSKHDSHT Trigger: TGTATGGCTGTCATGCTTAGACAGTGATTCCTGCAACTTGACCTTCAGGCTGGGAGAGGTGGAGAGCCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 50 transcripts: ENST00000375633.5 ENST00000375635.6 ENST00000375638.7 ENST00000375640.7 ENST00000375641.6 ENST00000375642.6 ENST00000383383.6 ENST00000383384.6 ENST00000383385.6 ENST00000395788.3 ENST00000395789.5 ENST00000400034.5 ENST00000400035.5 ENST00000400037.5 ENST00000400038.5 ENST00000400039.3 ENST00000413638.5 ENST00000414434.6 ENST00000414536.6 ENST00000416886.5 ENST00000421039.2 ENST00000421605.5 ENST00000423640.6 ENST00000423916.5 ENST00000424962.6 ENST00000426843.5 ENST00000430690.5 ENST00000433697.5 ENST00000433752.6 ENST00000435938.5 ENST00000436205.2 ENST00000436495.5 ENST00000436558.5 ENST00000439865.5 ENST00000439907.2 ENST00000440361.5 ENST00000443974.5 ENST00000444192.5 ENST00000444331.5 ENST00000444974.6 ENST00000450610.6 ENST00000456268.5 ENST00000456690.5 ENST00000458514.5 ENST00000549426.2 ENST00000550492.2 ENST00000550685.2 ENST00000552514.2 ENST00000614363.4 ENST00000648677.1 |
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| CDS CAA 90 bp | GAAATGAAACAGAACAAAAGATTAGGAATCTTGGCCATGAACTCGTaGAGCCTGAGAAATGCTGGACCGAGGGGGCGGTCAGAGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: EMKQNKRLGILAMNS*SLRNAGPRGRSERC Trigger: GCAGCGCTCTGACCGCCCCCTCGGTCCAGCATTTCTCAGGCTCAACGAGTTCATGGCCAAGATTCCTAATCTTTTGTTCTGTTTCATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000375633.5 ENST00000400034.5 ENST00000416886.5 ENST00000426843.5 ENST00000456690.5 |
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| CDS CAA 72 bp | CAGAACAAAAGATTAGGAATCTTGGCCATGAACTCGTaGAGCCTGAGAAATGCTGGACCGAGGGGGCGGTCA | + |
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Preference number: 6 (lower is better) Translates to: QNKRLGILAMNS*SLRNAGPRGRS Trigger: TGACCGCCCCCTCGGTCCAGCATTTCTCAGGCTCAACGAGTTCATGGCCAAGATTCCTAATCTTTTGTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000375633.5 ENST00000400034.5 ENST00000416886.5 ENST00000426843.5 ENST00000456690.5 |
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| CDS CAA 90 bp | ACAACTCCTAACGGGGAAATGAAACAGAACAAAAGATTAGGAATCTaGGCCATGAACTCGTTGAGCCTGAGAAATGCTGGACCGAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: TTPNGEMKQNKRLGI*AMNSLSLRNAGPRG Trigger: CCCCCTCGGTCCAGCATTTCTCAGGCTCAACGAGTTCATGGCCAAGATTCCTAATCTTTTGTTCTGTTTCATTTCCCCGTTAGGAGTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000375633.5 ENST00000400034.5 ENST00000416886.5 ENST00000426843.5 ENST00000456690.5 |
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| CDS TCA 72 bp | TGGCATTGCGCCCTTTACTCAAGGATAACACGGCGATaGACGTCTTACAACTCAGTTGTTTTGAGTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: WHCALYSRITRR*TSYNSVVLSQQ Trigger: CTGCTGACTCAAAACAACTGAGTTGTAAGACGTTCATCGCCGTGTTATCCTTGAGTAAAGGGCGCAATGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000375642.6 ENST00000400037.5 ENST00000423916.5 ENST00000430690.5 ENST00000440361.5 |
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| CDS TCA 72 bp | ATTGCGCCCTGTCTTTACTCAAGGATAACACGGCGATaGACGTCTTACAACTCAGTTGTTTTGAGTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: IAPCLYSRITRR*TSYNSVVLSQQ Trigger: CTGCTGACTCAAAACAACTGAGTTGTAAGACGTTCATCGCCGTGTTATCCTTGAGTAAAGACAGGGCGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000395789.5 ENST00000400035.5 ENST00000436495.5 ENST00000436558.5 ENST00000443974.5 |
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| CDS TCA 72 bp | AAAAGCCCGCTTCTTTACTCAAGGATAACACGGCGATaGACGTCTTACAACTCAGTTGTTTTGAGTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: KSPLLYSRITRR*TSYNSVVLSQQ Trigger: CTGCTGACTCAAAACAACTGAGTTGTAAGACGTTCATCGCCGTGTTATCCTTGAGTAAAGAAGCGGGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000375638.7 ENST00000383383.6 ENST00000414434.6 ENST00000423640.6 ENST00000433752.6 |
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| CDS TCA 72 bp | CCAGAGTTCATTCTTTACTCAAGGATAACACGGCGATaGACGTCTTACAACTCAGTTGTTTTGAGTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: PEFILYSRITRR*TSYNSVVLSQQ Trigger: CTGCTGACTCAAAACAACTGAGTTGTAAGACGTTCATCGCCGTGTTATCCTTGAGTAAAGAATGAACTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000375640.7 ENST00000414536.6 ENST00000424962.6 ENST00000444974.6 ENST00000450610.6 |
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| CDS TCA 72 bp | CCAGAGTTCATTCTTTACTCAAGGATAACACGGCGATaGACGTCTTACAACTCCAGGGAAGTATGTTTCACA | + |
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Preference number: 6 (lower is better) Translates to: PEFILYSRITRR*TSYNSREVCFT Trigger: TGTGAAACATACTTCCCTGGAGTTGTAAGACGTTCATCGCCGTGTTATCCTTGAGTAAAGAATGAACTCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433697.5 |
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| CDS TCA 72 bp | AGTTCATTTCACCTTTACTCAAGGATAACACGGCGATaGACGTCTTACAACTCAGTTGTTTTGAGTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSFHLYSRITRR*TSYNSVVLSQQ Trigger: CTGCTGACTCAAAACAACTGAGTTGTAAGACGTTCATCGCCGTGTTATCCTTGAGTAAAGGTGAAATGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000549426.2 ENST00000550492.2 ENST00000550685.2 ENST00000552514.2 ENST00000614363.4 |
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