Pregenerated sensors for SNHG27 (Homo sapiens)
Ensembl gene IDs: ENSG00000251676Ensembl transcript IDs: ENST00000507933.1, ENST00000514222.2, ENST00000653283.1, ENST00000654278.1, ENST00000655257.1, ENST00000657219.1, ENST00000657220.1, ENST00000657961.1, ENST00000658913.1, ENST00000662181.1, ENST00000663369.1, ENST00000663882.1, ENST00000664137.1, ENST00000664412.1, ENST00000667068.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCAGGACTGGTCTCAGCCCCGACTCTGACCAAGCTCACACAGGGTaGCTGCTTAGCCAAGTCTCAAGGACCCATCCCCGGGCAACGGTG | + |
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Preference number: 5 (lower is better) Translates to: ARTGLSPDSDQAHTG*LLSQVSRTHPRATV Trigger: CACCGTTGCCCGGGGATGGGTCCTTGAGACTTGGCTAAGCAGGCACCCTGTGTGAGCTTGGTCAGAGTCGGGGCTGAGACCAGTCCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654278.1 ENST00000657961.1 ENST00000662181.1 |
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| CDS CCA 90 bp | ATCCCGTGCTGCGTCCCCGGCGATCTGTCTCAGGTTTCTTCCTTCTaGCGTTTCTTCCTCCTGGTTGACCCTCCGCGAATCCCGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: IPCCVPGDLSQVSSF*RFFLLVDPPRIPAS Trigger: GGAGGCCGGGATTCGCGGAGGGTCAACCAGGAGGAAGAAACGCCAGAAGGAAGAAACCTGAGACAGATCGCCGGGGACGCAGCACGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000514222.2 ENST00000658913.1 ENST00000664412.1 |
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| CDS TCA 90 bp | ATCCCGCGCTGTCTCCCCGGAGATCTGTCTGAGGTTTCTTCCTCCTaGTGGACCCTCCGCGAATCCCGGCCTCCGGAGACCTTCCTGTTA | + |
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Preference number: 5 (lower is better) Translates to: IPRCLPGDLSEVSSS*WTLRESRPPETFLL Trigger: TAACAGGAAGGTCTCCGGAGGCCGGGATTCGCGGAGGGTCCATCAGGAGGAAGAAACCTCAGACAGATCTCCGGGGAGACAGCGCGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654278.1 ENST00000657961.1 ENST00000662181.1 |
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| CDS TCA 90 bp | CGTCCTGGTAACTGCCCTGGCCAGGACTGGTCTCAGCCCCGACTCTaGCGCACGATCACACAGGGCTCCTACTTCGCAAAGTCTCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: RPGNCPGQDWSQPRL*RTITQGSYFAKSQG Trigger: TCCCTGAGACTTTGCGAAGTAGGAGCCCTGTGTGATCGTGCGTCAGAGTCGGGGCTGAGACCAGTCCTGGCCAGGGCAGTTACCAGGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657220.1 |
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| CDS TCA 90 bp | GCAATGCCCACGTGGCAAAACTCAGCAAATTCAGCTTCCTTTCCATaGTCCCTCTTTGAATGTGCAGGGTTGAAGAAACCCTGGCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: AMPTWQNSANSASFP*SLFECAGLKKPWPA Trigger: AGCAGGCCAGGGTTTCTTCAACCCTGCACATTCAAAGAGGGATCATGGAAAGGAAGCTGAATTTGCTGAGTTTTGCCACGTGGGCATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000514222.2 ENST00000657961.1 ENST00000658913.1 ENST00000663882.1 ENST00000664137.1 |
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| CDS CCA 90 bp | ATAACTCAAGGAGGAGCCTTTGAATGTGCAGGGTTGAAGAAACCCTaGCCTGCTGAGTTAACACATTCTTCCCTAATCCATATTTATTGT | + |
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Preference number: 5 (lower is better) Translates to: ITQGGAFECAGLKKP*PAELTHSSLIHIYC Trigger: ACAATAAATATGGATTAGGGAAGAATGTGTTAACTCAGCAGGCCAGGGTTTCTTCAACCCTGCACATTCAAAGGCTCCTCCTTGAGTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654278.1 |
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| CDS TCA 72 bp | GATACACTCCCTTCCCGCACACCGTCCGCGCACGCCTaGGGCTGGGATCCCGCGCTGCCTCCCCGGCGATCT | + |
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Preference number: 6 (lower is better) Translates to: DTLPSRTPSAHA*GWDPALPPRRS Trigger: AGATCGCCGGGGAGGCAGCGCGGGATCCCAGCCTCAGGCGTGCGCGGACGGTGTGCGGGAAGGGAGTGTATC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657220.1 |
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| CDS GCA 72 bp | TACACCAGGATACACTCCCTTCCCGCACACCGTCCGTaGACGCCTGAGGCTGGGATCCCGCGCTGCGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: YTRIHSLPAHRP*TPEAGIPRCVP Trigger: GGGGACGCAGCGCGGGATCCCAGCCTCAGGCGTGCACGGACGGTGTGCGGGAAGGGAGTGTATCCTGGTGTA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653283.1 ENST00000663369.1 ENST00000663882.1 |
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| CDS TCA 72 bp | GATACACTCCCTTCCCGCACACTGTCCGCGCACGCCTaGGGCTGGGATCCCGCGCTGTCTCCCCGGAGATCT | + |
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Preference number: 6 (lower is better) Translates to: DTLPSRTLSAHA*GWDPALSPRRS Trigger: AGATCTCCGGGGAGACAGCGCGGGATCCCAGCCTCAGGCGTGCGCGGACAGTGTGCGGGAAGGGAGTGTATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654278.1 ENST00000657961.1 ENST00000662181.1 |
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| CDS GCA 72 bp | TACACCAGGATACACTCCCTTCCCGCACACCGTCCGTaGACGCCTGAGGCTGGGATCCCGTGCTGCGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: YTRIHSLPAHRP*TPEAGIPCCVP Trigger: GGGGACGCAGCACGGGATCCCAGCCTCAGGCGTGCACGGACGGTGTGCGGGAAGGGAGTGTATCCTGGTGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667068.1 |
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| CDS TCA 72 bp | GGCTGGGATCCCGCGCTGCGTCCCCGGCGATCTGTCTaGGGTTTCTTCCTTCTGGCGTTTCTTCCTGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: GWDPALRPRRSV*GFFLLAFLPGG Trigger: ACCACCAGGAAGAAACGCCAGAAGGAAGAAACCTCAGACAGATCGCCGGGGACGCAGCGCGGGATCCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655257.1 |
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| CDS TCA 72 bp | TGTCTCCCCGGAGATCTGTCTGAGGTTTCTTCCTCCTaGTGGACCCTCCGCGAATCCCGGCCTCCGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: CLPGDLSEVSSS*WTLRESRPPET Trigger: GGTCTCCGGAGGCCGGGATTCGCGGAGGGTCCATCAGGAGGAAGAAACCTCAGACAGATCTCCGGGGAGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654278.1 ENST00000657961.1 ENST00000662181.1 |
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| CDS TCA 72 bp | GGCTGGGATCCCGCGCTGTCTCCCCGGAGATCTGTCTaGGGTTTCTTCCTCCTGATGGACCCTCCGCGAATC | + |
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Preference number: 6 (lower is better) Translates to: GWDPALSPRRSV*GFFLLMDPPRI Trigger: GATTCGCGGAGGGTCCATCAGGAGGAAGAAACCTCAGACAGATCTCCGGGGAGACAGCGCGGGATCCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654278.1 ENST00000657961.1 ENST00000662181.1 |
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| CDS TCA 72 bp | AACTGCCCTGGCCACGACTGGTCTGAGCCCCGACTCTaGCGCACGATCACACAGGGCTCCTACTTCGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: NCPGHDWSEPRL*RTITQGSYFAK Trigger: CTTGGCGAAGTAGGAGCCCTGTGTGATCGTGCGTCAGAGTCGGGGCTCAGACCAGTCGTGGCCAGGGCAGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664412.1 |
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| CDS GCA 72 bp | GGTCTCAGCCCCGACTCTGACCAAGCTCACACAGGGTaGCTGCTTAGCCAAGTCTCAAGGACCCATCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: GLSPDSDQAHTG*LLSQVSRTHPR Trigger: CCGGGGATGGGTCCTTGAGACTTGGCTAAGCAGGCACCCTGTGTGAGCTTGGTCAGAGTCGGGGCTGAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654278.1 ENST00000657961.1 ENST00000662181.1 |
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| CDS CCA 72 bp | CTGAGGTTTCTTCCTTCTGGCGTTTCTTCCTGGTGGTaGACCCTCCGCGAATCCCGGCCTCCGGACACCGTC | + |
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Preference number: 6 (lower is better) Translates to: LRFLPSGVSSWW*TLRESRPPDTV Trigger: GACGGTGTCCGGAGGCCGGGATTCGCGGAGGGTCCACCACCAGGAAGAAACGCCAGAAGGAAGAAACCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655257.1 |
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| CDS TCA 72 bp | AACTGCCCTGGCCAGGACTGGTCTCAGCCCCGACTCTaGCGCACGATCACACAGGGCTCCTACTTCGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: NCPGQDWSQPRL*RTITQGSYFAK Trigger: CTTTGCGAAGTAGGAGCCCTGTGTGATCGTGCGTCAGAGTCGGGGCTGAGACCAGTCCTGGCCAGGGCAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657220.1 |
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| CDS GCA 72 bp | TCAGCCCCGACTCTGACCAAGCTCACACAGGGTGCCTaGTTAGCCAAGTCTCAAGGACCCATCCCCGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: SAPTLTKLTQGA*LAKSQGPIPGQ Trigger: TTGCCCGGGGATGGGTCCTTGAGACTTGGCTAAGCAGGCACCCTGTGTGAGCTTGGTCAGAGTCGGGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654278.1 ENST00000657961.1 ENST00000662181.1 |
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| CDS CCA 72 bp | TGTCTGAGGTTTCTTCCTTCTGGCGTTTCTTCCTGGTaGTGGACCCTCCGCGAATCCCGGCCTCCGGACACC | + |
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Preference number: 6 (lower is better) Translates to: CLRFLPSGVSSW*WTLRESRPPDT Trigger: GGTGTCCGGAGGCCGGGATTCGCGGAGGGTCCACCACCAGGAAGAAACGCCAGAAGGAAGAAACCTCAGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655257.1 |
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| CDS CCA 72 bp | TGTCTGAGGTTTCTTCCTTCTGGCGTTTCTTCCTGCTaGTGGACCCTCCGCGAATCCCGGCCTCCGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: CLRFLPSGVSSC*WTLRESRPPET Trigger: GGTCTCCGGAGGCCGGGATTCGCGGAGGGTCCACCAGCAGGAAGAAACGCCAGAAGGAAGAAACCTCAGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657220.1 |
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| CDS CAA 72 bp | CTCAGGTTTCTTCCTTCTGGCGTTTCTTCCTCCTGGTaGACCCTCCGCGAATCCCGGCCTCCGGAGACCGTC | + |
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Preference number: 6 (lower is better) Translates to: LRFLPSGVSSSW*TLRESRPPETV Trigger: GACGGTCTCCGGAGGCCGGGATTCGCGGAGGGTCAACCAGGAGGAAGAAACGCCAGAAGGAAGAAACCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000514222.2 ENST00000664412.1 |
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| CDS CCA 72 bp | TGTCTCAGGTTTCTTCCTTCTGGCGTTTCTTCCTCCTaGTTGACCCTCCGCGAATCCCGGCCTCCGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: CLRFLPSGVSSS*LTLRESRPPET Trigger: GGTCTCCGGAGGCCGGGATTCGCGGAGGGTCAACCAGGAGGAAGAAACGCCAGAAGGAAGAAACCTGAGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000514222.2 ENST00000664412.1 |
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| CDS CCA 72 bp | GGAGGAGCCTTTGAATGTGCAGGGTTGAAGAAACCCTaGCCTGCTGAGTTAACACATTCTTCCCTAATCCAT | + |
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Preference number: 6 (lower is better) Translates to: GGAFECAGLKKP*PAELTHSSLIH Trigger: ATGGATTAGGGAAGAATGTGTTAACTCAGCAGGCCAGGGTTTCTTCAACCCTGCACATTCAAAGGCTCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654278.1 |
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| CDS GCA 72 bp | AGGTTTTTATTGGTGGTTAATCACATAGGCATGCAATaGCCACGTGGCAAAACTCAGCAAATTCAGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: RFLLVVNHIGMQ*PRGKTQQIQLP Trigger: AGGAAGCTGAATTTGCTGAGTTTTGCCACGTGGGCATTGCATGCCTATGTGATTAACCACCAATAAAAACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENST00000507933.1 ENST00000514222.2 ENST00000653283.1 ENST00000655257.1 ENST00000657219.1 ENST00000657961.1 ENST00000658913.1 ENST00000662181.1 ENST00000663369.1 ENST00000663882.1 ENST00000664137.1 ENST00000664412.1 ENST00000667068.1 |
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| CDS CCA 72 bp | AATTGGAAGTGTAGTAAGAGAACACTCTTACACTATTaGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: NWKCSKRTLLHY*WECKLVQPLWK Trigger: CTTCCACAATGGTTGAACTAATTTACACTCCCACCAATAGTGTAAGAGTGTTCTCTTACTACACTTCCAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657220.1 |
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| CDS GCA 72 bp | AGATGCAAATCTGCAAATCTACAAGTATACCCTAGATaGAAAATCCTCAATAACTTGAATACGACACTATGT | + |
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Preference number: 6 (lower is better) Translates to: RCKSANLQVYPR*KILNNLNTTLC Trigger: ACATAGTGTCGTATTCAAGTTATTGAGGATTTTGCATCTAGGGTATACTTGTAGATTTGCAGATTTGCATCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657219.1 ENST00000664137.1 |
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