Pregenerated sensors for SNHG22 (Homo sapiens)
Ensembl gene IDs: ENSG00000267322Ensembl transcript IDs: ENST00000589499.1, ENST00000617833.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGGCAACAGCCTGTGAAGAGCAGCTCTCCTGGCAGCGTCCCTGACTaGCGCATTTCTGACGGCTGCCCATGGGCCGCACTGGTCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: WQQPVKSSSPGSVPD*RISDGCPWAALVTS Trigger: GGAGGTGACCAGTGCGGCCCATGGGCAGCCGTCAGAAATGCGCCAGTCAGGGACGCTGCCAGGAGAGCTGCTCTTCACAGGCTGTTGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS GCA 90 bp | CGCATTTCTGACGGCTGCCCATGGGCCGCACTGGTCACCTCCAACTaGAAGCAGGATTTTACCCCCACCATCCCAGGCCGGGCTGATGTC | + |
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Preference number: 5 (lower is better) Translates to: RISDGCPWAALVTSN*KQDFTPTIPGRADV Trigger: GACATCAGCCCGGCCTGGGATGGTGGGGGTAAAATCCTGCTTGCAGTTGGAGGTGACCAGTGCGGCCCATGGGCAGCCGTCAGAAATGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 90 bp | GCGTCCCTGACTGGCGCATTTCTGACGGCTGCCCATGGGCCGCACTaGTCACCTCCAACTGCAAGCAGGATTTTACCCCCACCATCCCAG | + |
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Preference number: 5 (lower is better) Translates to: ASLTGAFLTAAHGPH*SPPTASRILPPPSQ Trigger: CTGGGATGGTGGGGGTAAAATCCTGCTTGCAGTTGGAGGTGACCAGTGCGGCCCATGGGCAGCCGTCAGAAATGCGCCAGTCAGGGACGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 90 bp | TCTCCTGGCAGCGTCCCTGACTGGCGCATTTCTGACGGCTGCCCATaGGCCGCACTGGTCACCTCCAACTGCAAGCAGGATTTTACCCCC | + |
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Preference number: 5 (lower is better) Translates to: SPGSVPDWRISDGCP*AALVTSNCKQDFTP Trigger: GGGGGTAAAATCCTGCTTGCAGTTGGAGGTGACCAGTGCGGCCCATGGGCAGCCGTCAGAAATGCGCCAGTCAGGGACGCTGCCAGGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 90 bp | GTCATAGTACCAGCGTCCTGGTCCCGATCCAGTCTGGAGCAGCCCTaGGCTCCCCATTCACTGGGCTGGCCAAGTCTTGTGGCCCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: VIVPASWSRSSLEQP*APHSLGWPSLVAPR Trigger: TCTTGGGGCCACAAGACTTGGCCAGCCCAGTGAATGGGGAGCCCAGGGCTGCTCCAGACTGGATCGGGACCAGGACGCTGGTACTATGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS GCA 90 bp | AGCAGCTCTCCTGGCAGCGTCCCTGACTGGCGCATTTCTGACGGCTaGCCATGGGCCGCACTGGTCACCTCCAACTGCAAGCAGGATTTT | + |
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Preference number: 5 (lower is better) Translates to: SSSPGSVPDWRISDG*PWAALVTSNCKQDF Trigger: AAAATCCTGCTTGCAGTTGGAGGTGACCAGTGCGGCCCATGGGCAGCCGTCAGAAATGCGCCAGTCAGGGACGCTGCCAGGAGAGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS GCA 90 bp | GGGCCCTGGATAATCTCACTTGCCCACTTGCTCTTCCAACCTCCCTaGCCCCTGCATTCTCACACCTGTCCGTTCCTTCCCAGGGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: GPWIISLAHLLFQPP*PLHSHTCPFLPRAL Trigger: CAGCGCCCTGGGAAGGAACGGACAGGTGTGAGAATGCAGGGGGCAGGGAGGTTGGAAGAGCAAGTGGGCAAGTGAGATTATCCAGGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 90 bp | CTAGGGTCTGGGGCCACACCAGTGTCCTGTTTTGCCGCTGGGCCCTaGATAATCTCACTTGCCCACTTGCTCTTCCAACCTCCCTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: LGSGATPVSCFAAGP*IISLAHLLFQPPCP Trigger: GGGGCAGGGAGGTTGGAAGAGCAAGTGGGCAAGTGAGATTATCCAGGGCCCAGCGGCAAAACAGGACACTGGTGTGGCCCCAGACCCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 90 bp | TCTCAGTGGGCTGATGGGCTTCCAGTGGCAACAGCTGCTAGGGTCTaGGGCCACACCAGTGTCCTGTTTTGCCGCTGGGCCCTGGATAAT | + |
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Preference number: 5 (lower is better) Translates to: SQWADGLPVATAARV*GHTSVLFCRWALDN Trigger: ATTATCCAGGGCCCAGCGGCAAAACAGGACACTGGTGTGGCCCCAGACCCTAGCAGCTGTTGCCACTGGAAGCCCATCAGCCCACTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 90 bp | CCTGGTCCCGATCCAGTCTGGAGCAGCCCTGGGCTCCCCATTCACTaGGCTGGCCAAGTCTTGTGGCCCCAAGAGTTGGTTAATCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: PGPDPVWSSPGLPIH*AGQVLWPQELVNPL Trigger: CAAAGGATTAACCAACTCTTGGGGCCACAAGACTTGGCCAGCCCAGTGAATGGGGAGCCCAGGGCTGCTCCAGACTGGATCGGGACCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 90 bp | GTACAGAGGAGCTTCGGACTGATGGTGGTCATAGTACCAGCGTCCTaGTCCCGATCCAGTCTGGAGCAGCCCTGGGCTCCCCATTCACTG | + |
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Preference number: 5 (lower is better) Translates to: VQRSFGLMVVIVPAS*SRSSLEQPWAPHSL Trigger: CAGTGAATGGGGAGCCCAGGGCTGCTCCAGACTGGATCGGGACCAGGACGCTGGTACTATGACCACCATCAGTCCGAAGCTCCTCTGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS GCA 90 bp | GTGGCAACAGCTGCTAGGGTCTGGGGCCACACCAGTGTCCTGTTTTaGCGCTGGGCCCTGGATAATCTCACTTGCCCACTTGCTCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: VATAARVWGHTSVLF*RWALDNLTCPLALP Trigger: TGGAAGAGCAAGTGGGCAAGTGAGATTATCCAGGGCCCAGCGGCAAAACAGGACACTGGTGTGGCCCCAGACCCTAGCAGCTGTTGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 90 bp | ACAGCTGCTAGGGTCTGGGGCCACACCAGTGTCCTGTTTTGCCGCTaGGCCCTGGATAATCTCACTTGCCCACTTGCTCTTCCAACCTCC | + |
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Preference number: 5 (lower is better) Translates to: TAARVWGHTSVLFCR*ALDNLTCPLALPTS Trigger: GGAGGTTGGAAGAGCAAGTGGGCAAGTGAGATTATCCAGGGCCCAGCGGCAAAACAGGACACTGGTGTGGCCCCAGACCCTAGCAGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS TCA 90 bp | ATCATCTCCCACTTCCTGAGTTCCAGAGCAGGTGGCAACAGCCTGTaGAGAGCAGCTCTCCTGGCAGCGTCCCTGACTGGCGCATTTCTG | + |
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Preference number: 5 (lower is better) Translates to: IISHFLSSRAGGNSL*RAALLAASLTGAFL Trigger: CAGAAATGCGCCAGTCAGGGACGCTGCCAGGAGAGCTGCTCTTCACAGGCTGTTGCCACCTGCTCTGGAACTCAGGAAGTGGGAGATGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS TCA 90 bp | GCTTGGCTTGGGGAGGCTTGGGATTCAGCAAGGCGCCAGAGAGCCTaGCCTGGGAGGAGTCTTGCCTTGAGAGAATGGACTCTGACTCAT | + |
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Preference number: 5 (lower is better) Translates to: AWLGEAWDSARRQRA*PGRSLALREWTLTH Trigger: ATGAGTCAGAGTCCATTCTCTCAAGGCAAGACTCCTCCCAGGTCAGGCTCTCTGGCGCCTTGCTGAATCCCAAGCCTCCCCAAGCCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS GCA 90 bp | CACACCAGTGTCCTGTTTTGCCGCTGGGCCCTGGATAATCTCACTTaGCCACTTGCTCTTCCAACCTCCCTGCCCCCTGCATTCTCACAC | + |
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Preference number: 5 (lower is better) Translates to: HTSVLFCRWALDNLT*PLALPTSLPPAFSH Trigger: GTGTGAGAATGCAGGGGGCAGGGAGGTTGGAAGAGCAAGTGGGCAAGTGAGATTATCCAGGGCCCAGCGGCAAAACAGGACACTGGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS TCA 90 bp | GCTTTGGTGCTGCTTGGCAAGGCACCTAACAGGGGAGACGGAGTCTaGGTAGAACTCAGGGTTCACAGGAGACCTTCGGTAGCCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: ALVLLGKAPNRGDGV*VELRVHRRPSVATE Trigger: CTCTGTGGCTACCGAAGGTCTCCTGTGAACCCTGAGTTCTACTCAGACTCCGTCTCCCCTGTTAGGTGCCTTGCCAAGCAGCACCAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 90 bp | GCTTGGGGAGGCTTGGGATTCAGCAAGGCGCCAGAGAGCCTGACCTaGGAGGAGTCTTGCCTTGAGAGAATGGACTCTGACTCATCATCT | + |
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Preference number: 5 (lower is better) Translates to: AWGGLGFSKAPESLT*EESCLERMDSDSSS Trigger: AGATGATGAGTCAGAGTCCATTCTCTCAAGGCAAGACTCCTCCCAGGTCAGGCTCTCTGGCGCCTTGCTGAATCCCAAGCCTCCCCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS TCA 90 bp | TCTTGCCTTGAGAGAATGGACTCTGACTCATCATCTCCCACTTCCTaGGTTCCAGAGCAGGTGGCAACAGCCTGTGAAGAGCAGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SCLERMDSDSSSPTS*VPEQVATACEEQLS Trigger: GGAGAGCTGCTCTTCACAGGCTGTTGCCACCTGCTCTGGAACTCAGGAAGTGGGAGATGATGAGTCAGAGTCCATTCTCTCAAGGCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 90 bp | GGCTCCCCATTCACTGGGCTGGCCAAGTCTTGTGGCCCCAAGAGTTaGTTAATCCTTTGCAAGAGTCAGAGTTGTAGCCGAGGATTCAGT | + |
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Preference number: 5 (lower is better) Translates to: GSPFTGLAKSCGPKS*LILCKSQSCSRGFS Trigger: ACTGAATCCTCGGCTACAACTCTGACTCTTGCAAAGGATTAACCAACTCTTGGGGCCACAAGACTTGGCCAGCCCAGTGAATGGGGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS TCA 90 bp | CTTTCTACCAACTGGCCTCTCACGCAGAGGCCACTCTTAGGTCACTaGATAAGGTTTTACGGTCTGCCGCCTCTCCTGTCATTTAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: LSTNWPLTQRPLLGH*IRFYGLPPLLSFKL Trigger: CAGCTTAAATGACAGGAGAGGCGGCAGACCGTAAAACCTTATTCAGTGACCTAAGAGTGGCCTCTGCGTGAGAGGCCAGTTGGTAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS GCA 90 bp | TGGGTTAGTAAAAGGATATGCCCTTCCTTTCAGTCTTACCTTCTTTaGAGTTGGCTTGACGCCATCTCTCTCCTAAGAACCAGCACTTCA | + |
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Preference number: 5 (lower is better) Translates to: WVSKRICPSFQSYLL*SWLDAISLLRTSTS Trigger: TGAAGTGCTGGTTCTTAGGAGAGAGATGGCGTCAAGCCAACTGCAAAGAAGGTAAGACTGAAAGGAAGGGCATATCCTTTTACTAACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617833.1 |
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| CDS CCA 90 bp | TATATAAGGCTAGGGCAGGACCTAGAACTCCATTACATTAGGTTGTaGTTACATGTGCTCATATTCTCTGGGTCAAGAGCTGAACCACAG | + |
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Preference number: 5 (lower is better) Translates to: YIRLGQDLELHYIRL*LHVLIFSGSRAEPQ Trigger: CTGTGGTTCAGCTCTTGACCCAGAGAATATGAGCACATGTAACCACAACCTAATGTAATGGAGTTCTAGGTCCTGCCCTAGCCTTATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617833.1 |
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| CDS CCA 90 bp | AGTAAAAGGATATGCCCTTCCTTTCAGTCTTACCTTCTTTGCAGTTaGCTTGACGCCATCTCTCTCCTAAGAACCAGCACTTCATTTGAT | + |
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Preference number: 5 (lower is better) Translates to: SKRICPSFQSYLLCS*LDAISLLRTSTSFD Trigger: ATCAAATGAAGTGCTGGTTCTTAGGAGAGAGATGGCGTCAAGCCAACTGCAAAGAAGGTAAGACTGAAAGGAAGGGCATATCCTTTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617833.1 |
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| CDS TCA 90 bp | CAGCATGACCAGATCCGTGTAGTCCAAATAACAAGGAAGAATGATTaGCTCTATCTTCATCATTACAATTATCCCCTTTTCTGCCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: QHDQIRVVQITRKND*LYLHHYNYPLFCLL Trigger: AAGCAGGCAGAAAAGGGGATAATTGTAATGATGAAGATAGAGTCAATCATTCTTCCTTGTTATTTGGACTACACGGATCTGGTCATGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617833.1 |
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| CDS GCA 72 bp | GACGGCTGCCCATGGGCCGCACTGGTCACCTCCAACTaGAAGCAGGATTTTACCCCCACCATCCCAGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: DGCPWAALVTSN*KQDFTPTIPGR Trigger: CCGGCCTGGGATGGTGGGGGTAAAATCCTGCTTGCAGTTGGAGGTGACCAGTGCGGCCCATGGGCAGCCGTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS GCA 72 bp | CCTGGCAGCGTCCCTGACTGGCGCATTTCTGACGGCTaGCCATGGGCCGCACTGGTCACCTCCAACTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: PGSVPDWRISDG*PWAALVTSNCK Trigger: CTTGCAGTTGGAGGTGACCAGTGCGGCCCATGGGCAGCCGTCAGAAATGCGCCAGTCAGGGACGCTGCCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 72 bp | CCTGTGAAGAGCAGCTCTCCTGGCAGCGTCCCTGACTaGCGCATTTCTGACGGCTGCCCATGGGCCGCACTG | + |
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Preference number: 6 (lower is better) Translates to: PVKSSSPGSVPD*RISDGCPWAAL Trigger: CAGTGCGGCCCATGGGCAGCCGTCAGAAATGCGCCAGTCAGGGACGCTGCCAGGAGAGCTGCTCTTCACAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 72 bp | GCTGATGGGCTTCCAGTGGCAACAGCTGCTAGGGTCTaGGGCCACACCAGTGTCCTGTTTTGCCGCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: ADGLPVATAARV*GHTSVLFCRWA Trigger: GGCCCAGCGGCAAAACAGGACACTGGTGTGGCCCCAGACCCTAGCAGCTGTTGCCACTGGAAGCCCATCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 72 bp | AGCGTCCCTGACTGGCGCATTTCTGACGGCTGCCCATaGGCCGCACTGGTCACCTCCAACTGCAAGCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: SVPDWRISDGCP*AALVTSNCKQD Trigger: ATCCTGCTTGCAGTTGGAGGTGACCAGTGCGGCCCATGGGCAGCCGTCAGAAATGCGCCAGTCAGGGACGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 72 bp | AGCTTCGGACTGATGGTGGTCATAGTACCAGCGTCCTaGTCCCGATCCAGTCTGGAGCAGCCCTGGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SFGLMVVIVPAS*SRSSLEQPWAP Trigger: GGGAGCCCAGGGCTGCTCCAGACTGGATCGGGACCAGGACGCTGGTACTATGACCACCATCAGTCCGAAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS GCA 72 bp | AGCGGAGCTGGGGAGCCAGGGAATCACATGCTTTGGTaGTGCTTGGCAAGGCACCTAACAGGGGAGACGGAG | + |
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Preference number: 6 (lower is better) Translates to: SGAGEPGNHMLW*CLARHLTGETE Trigger: CTCCGTCTCCCCTGTTAGGTGCCTTGCCAAGCAGCACCAAAGCATGTGATTCCCTGGCTCCCCAGCTCCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 72 bp | TGCAGCGGAGCTGGGGAGCCAGGGAATCACATGCTTTaGTGCTGCTTGGCAAGGCACCTAACAGGGGAGACG | + |
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Preference number: 6 (lower is better) Translates to: CSGAGEPGNHML*CCLARHLTGET Trigger: CGTCTCCCCTGTTAGGTGCCTTGCCAAGCAGCACCAAAGCATGTGATTCCCTGGCTCCCCAGCTCCGCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 72 bp | GATCCAGTCTGGAGCAGCCCTGGGCTCCCCATTCACTaGGCTGGCCAAGTCTTGTGGCCCCAAGAGTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: DPVWSSPGLPIH*AGQVLWPQELV Trigger: AACCAACTCTTGGGGCCACAAGACTTGGCCAGCCCAGTGAATGGGGAGCCCAGGGCTGCTCCAGACTGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CAA 72 bp | GTGCAGCGGAGCTGGGGAGCCAGGGAATCACATGCTTaGGTGCTGCTTGGCAAGGCACCTAACAGGGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: VQRSWGARESHA*VLLGKAPNRGD Trigger: GTCTCCCCTGTTAGGTGCCTTGCCAAGCAGCACCAAAGCATGTGATTCCCTGGCTCCCCAGCTCCGCTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS TCA 72 bp | CTCAGTAGTGCACGCCTCTCCCTCTGCAGGGCTTCATaGCTCAGAACACCAAAACCGGTCCGGGTCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LSSARLSLCRAS*LRTPKPVRVQL Trigger: GAGCTGGACCCGGACCGGTTTTGGTGTTCTGAGTCATGAAGCCCTGCAGAGGGAGAGGCGTGCACTACTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS GCA 72 bp | GCTGCTAGGGTCTGGGGCCACACCAGTGTCCTGTTTTaGCGCTGGGCCCTGGATAATCTCACTTGCCCACTT | + |
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Preference number: 6 (lower is better) Translates to: AARVWGHTSVLF*RWALDNLTCPL Trigger: AAGTGGGCAAGTGAGATTATCCAGGGCCCAGCGGCAAAACAGGACACTGGTGTGGCCCCAGACCCTAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS GCA 72 bp | GGAGCTGGGGAGCCAGGGAATCACATGCTTTGGTGCTaGTTGGCAAGGCACCTAACAGGGGAGACGGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: GAGEPGNHMLWC*LARHLTGETES Trigger: AGACTCCGTCTCCCCTGTTAGGTGCCTTGCCAAGCAGCACCAAAGCATGTGATTCCCTGGCTCCCCAGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 72 bp | ACTGGCGCATTTCTGACGGCTGCCCATGGGCCGCACTaGTCACCTCCAACTGCAAGCAGGATTTTACCCCCA | + |
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Preference number: 6 (lower is better) Translates to: TGAFLTAAHGPH*SPPTASRILPP Trigger: TGGGGGTAAAATCCTGCTTGCAGTTGGAGGTGACCAGTGCGGCCCATGGGCAGCCGTCAGAAATGCGCCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 72 bp | ACTCCTCCCTCAGCGGCTTGCTGTTCTAGGTCTCAGTaGGCTGATGGGCTTCCAGTGGCAACAGCTGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: TPPSAACCSRSQ*ADGLPVATAAR Trigger: CCTAGCAGCTGTTGCCACTGGAAGCCCATCAGCCCACTGAGACCTAGAACAGCAAGCCGCTGAGGGAGGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CAA 90 bp | GTGTCCTGTTTTGCCGCTGGGCCCTGGATAATCTCACTTGCCCACTaGCTCTTCCAACCTCCCTGCCCCCTGCATTCTCACACCTGTCCG | + |
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Preference number: 6 (lower is better) Translates to: VSCFAAGPWIISLAH*LFQPPCPLHSHTCP Trigger: CGGACAGGTGTGAGAATGCAGGGGGCAGGGAGGTTGGAAGAGCAAGTGGGCAAGTGAGATTATCCAGGGCCCAGCGGCAAAACAGGACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 72 bp | GGGGCCACACCAGTGTCCTGTTTTGCCGCTGGGCCCTaGATAATCTCACTTGCCCACTTGCTCTTCCAACCT | + |
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Preference number: 6 (lower is better) Translates to: GATPVSCFAAGP*IISLAHLLFQP Trigger: AGGTTGGAAGAGCAAGTGGGCAAGTGAGATTATCCAGGGCCCAGCGGCAAAACAGGACACTGGTGTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 72 bp | AGGGTCTGGGGCCACACCAGTGTCCTGTTTTGCCGCTaGGCCCTGGATAATCTCACTTGCCCACTTGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RVWGHTSVLFCR*ALDNLTCPLAL Trigger: AAGAGCAAGTGGGCAAGTGAGATTATCCAGGGCCCAGCGGCAAAACAGGACACTGGTGTGGCCCCAGACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CAA 90 bp | GTCTGGAGCAGCCCTGGGCTCCCCATTCACTGGGCTGGCCAAGTCTaGTGGCCCCAAGAGTTGGTTAATCCTTTGCAAGAGTCAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: VWSSPGLPIHWAGQV*WPQELVNPLQESEL Trigger: CAACTCTGACTCTTGCAAAGGATTAACCAACTCTTGGGGCCACAAGACTTGGCCAGCCCAGTGAATGGGGAGCCCAGGGCTGCTCCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CAA 72 bp | AGCCCTGGGCTCCCCATTCACTGGGCTGGCCAAGTCTaGTGGCCCCAAGAGTTGGTTAATCCTTTGCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SPGLPIHWAGQV*WPQELVNPLQE Trigger: CTCTTGCAAAGGATTAACCAACTCTTGGGGCCACAAGACTTGGCCAGCCCAGTGAATGGGGAGCCCAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CCA 72 bp | CCTGGGCTCCCCATTCACTGGGCTGGCCAAGTCTTGTaGCCCCAAGAGTTGGTTAATCCTTTGCAAGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PGLPIHWAGQVL*PQELVNPLQES Trigger: TGACTCTTGCAAAGGATTAACCAACTCTTGGGGCCACAAGACTTGGCCAGCCCAGTGAATGGGGAGCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS TCA 72 bp | AACTGGCCTCTCACGCAGAGGCCACTCTTAGGTCACTaGATAAGGTTTTACGGTCTGCCGCCTCTCCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: NWPLTQRPLLGH*IRFYGLPPLLS Trigger: TGACAGGAGAGGCGGCAGACCGTAAAACCTTATTCAGTGACCTAAGAGTGGCCTCTGCGTGAGAGGCCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS TCA 72 bp | GAGAGAATGGACTCTGACTCATCATCTCCCACTTCCTaGGTTCCAGAGCAGGTGGCAACAGCCTGTGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: ERMDSDSSSPTS*VPEQVATACEE Trigger: CTCTTCACAGGCTGTTGCCACCTGCTCTGGAACTCAGGAAGTGGGAGATGATGAGTCAGAGTCCATTCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CAA 90 bp | CCCTGGGACTGGGCCAACTCCTGTCAACAGGCTGATCTTAAAAAGTaGTCACCCAATGTGTTTGTAGAGGCTCCACCATGGAATACTCGC | + |
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Preference number: 6 (lower is better) Translates to: PWDWANSCQQADLKK*SPNVFVEAPPWNTR Trigger: GCGAGTATTCCATGGTGGAGCCTCTACAAACACATTGGGTGACAACTTTTTAAGATCAGCCTGTTGACAGGAGTTGGCCCAGTCCCAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS CAA 72 bp | TGGGCCAACTCCTGTCAACAGGCTGATCTTAAAAAGTaGTCACCCAATGTGTTTGTAGAGGCTCCACCATGG | + |
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Preference number: 6 (lower is better) Translates to: WANSCQQADLKK*SPNVFVEAPPW Trigger: CCATGGTGGAGCCTCTACAAACACATTGGGTGACAACTTTTTAAGATCAGCCTGTTGACAGGAGTTGGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589499.1 |
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| CDS TCA 72 bp | CCCTTCCTTTCAGTCTTACCTTCTTTGCAGTTGGCTTaGCGCCATCTCTCTCCTAAGAACCAGCACTTCATT | + |
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Preference number: 6 (lower is better) Translates to: PFLSVLPSLQLA*RHLSPKNQHFI Trigger: AATGAAGTGCTGGTTCTTAGGAGAGAGATGGCGTCAAGCCAACTGCAAAGAAGGTAAGACTGAAAGGAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617833.1 |
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| CDS GCA 72 bp | AAAAGGATATGCCCTTCCTTTCAGTCTTACCTTCTTTaGAGTTGGCTTGACGCCATCTCTCTCCTAAGAACC | + |
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Preference number: 6 (lower is better) Translates to: KRICPSFQSYLL*SWLDAISLLRT Trigger: GGTTCTTAGGAGAGAGATGGCGTCAAGCCAACTGCAAAGAAGGTAAGACTGAAAGGAAGGGCATATCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617833.1 |
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| CDS CCA 72 bp | CTAGGGCAGGACCTAGAACTCCATTACATTAGGTTGTaGTTACATGTGCTCATATTCTCTGGGTCAAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LGQDLELHYIRL*LHVLIFSGSRA Trigger: AGCTCTTGACCCAGAGAATATGAGCACATGTAACCACAACCTAATGTAATGGAGTTCTAGGTCCTGCCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617833.1 |
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| CDS CAA 72 bp | AGGCTAGGGCAGGACCTAGAACTCCATTACATTAGGTaGTGGTTACATGTGCTCATATTCTCTGGGTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: RLGQDLELHYIR*WLHVLIFSGSR Trigger: TCTTGACCCAGAGAATATGAGCACATGTAACCACAACCTAATGTAATGGAGTTCTAGGTCCTGCCCTAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617833.1 |
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| CDS CAA 90 bp | GGTTATATAAGGCTAGGGCAGGACCTAGAACTCCATTACATTAGGTaGTGGTTACATGTGCTCATATTCTCTGGGTCAAGAGCTGAACCA | + |
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Preference number: 6 (lower is better) Translates to: GYIRLGQDLELHYIR*WLHVLIFSGSRAEP Trigger: TGGTTCAGCTCTTGACCCAGAGAATATGAGCACATGTAACCACAACCTAATGTAATGGAGTTCTAGGTCCTGCCCTAGCCTTATATAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617833.1 |
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| CDS TCA 72 bp | CAGATCCGTGTAGTCCAAATAACAAGGAAGAATGATTaGCTCTATCTTCATCATTACAATTATCCCCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: QIRVVQITRKND*LYLHHYNYPLF Trigger: GAAAAGGGGATAATTGTAATGATGAAGATAGAGTCAATCATTCTTCCTTGTTATTTGGACTACACGGATCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617833.1 |
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