Pregenerated sensors for SNAI2 (Homo sapiens)
Ensembl gene IDs: ENSG00000019549Ensembl transcript IDs: ENST00000020945.4, ENST00000396822.6, ENST00000649776.1
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACTTTTTAAGGCACCTGAGTTCGCGTCTGGCAGATCTCTTCCTATaGGAAATCCTATTACAGACTCTATTACAAAGCAATACTGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: YFLRHLSSRLADLFL*EILLQTLLQSNTVL Trigger: AAGAACAGTATTGCTTTGTAATAGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGGTGCCTTAAAAAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| 3UTR GCA 90 bp | GTGTGTGTCTATACATATTATTTGGTTGGTCAGCACAGGAGAAAATaGCTTTGGACTTTATTTGTCATTTGGCTTCGGAGTGAAGAAATG | + |
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Preference number: 1 (lower is better) Translates to: VCVYTYYLVGQHRRK*LWTLFVIWLRSEEM Trigger: CATTTCTTCACTCCGAAGCCAAATGACAAATAAAGTCCAAAGGCATTTTCTCCTGTGCTGACCAACCAAATAATATGTATAGACACACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| 3UTR CAA 90 bp | AGTTCAACAATGGCAACCAGACAACCGACATGTAATGGAGTAAACTaGGAATACTTTTTAAGGCACCTGAGTTCGCGTCTGGCAGATCTC | + |
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Preference number: 2 (lower is better) Translates to: SSTMATRQPTCNGVN*EYFLRHLSSRLADL Trigger: GAGATCTGCCAGACGCGAACTCAGGTGCCTTAAAAAGTATTCCAAGTTTACTCCATTACATGTCGGTTGTCTGGTTGCCATTGTTGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| 3UTR-3UTR TCA 90 bp | TTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTATTACACATTTGGCTTCGGAGTaGAGAAATGCATTCTGTTCG | + |
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Preference number: 2 (lower is better) Translates to: FASGRSLPMGNPITDSITHLASE*RNAFCS Trigger: CGAACAGAATGCATTTCTTCACTCCGAAGCCAAATG...TGTAATAGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| 3UTR-3UTR CCA 90 bp | AAGACAATGGAGCATGCGCCAGGAATGTTCAAAGCTAATCTTTCCCTCCTCCCCACTTTATTTGTCATTTaGCTTCGGAGTGAAGAAATG | + |
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Preference number: 2 (lower is better) Translates to: KTMEHAPGMFKANLSLLPTLFVI*LRSEEM Trigger: CATTTCTTCACTCCGAAGCCAAATGACAAATAAAGT...GGGGAGGAGGGAAAGATTAGCTTTGAACATTCCTGGCGCATGCTCCATTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| 3UTR-3UTR TCA 90 bp | AAAGGCTTTAGTTCAACAATGGCAACCAGACAACCGACATGTAATGGAGTAAACTTATCTTTAAACACATaGATTCCATGCTCTTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: KGFSSTMATRQPTCNGVNLSLNT*IPCSCS Trigger: GCTGCAAGAGCATGGAATTCATGTGTTTAAAGATAA...GTTTACTCCATTACATGTCGGTTGTCTGGTTGCCATTGTTGAACTAAAGCCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| 3UTR-3UTR CCA 90 bp | TCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTATTACAATACATATTATTTGGTTaGTCAGCACAGGAGAAAATG | + |
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Preference number: 2 (lower is better) Translates to: SRLADLFLWEILLQTLLQYILFG*SAQEKM Trigger: CATTTTCTCCTGTGCTGACCAACCAAATAATATGTA...TTGTAATAGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| 3UTR-3UTR CCA 90 bp | TCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTATTACAATCTATACATATTATTTaGTTGGTCAGCACAGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: SRLADLFLWEILLQTLLQSIHII*LVSTGE Trigger: TTCTCCTGTGCTGACCAACCAAATAATATGTATAGA...TTGTAATAGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| 3UTR CCA 72 bp | AGGCACCTGAGTTCGCGTCTGGCAGATCTCTTCCTATaGGAAATCCTATTACAGACTCTATTACAAAGCAAT | + |
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Preference number: 3 (lower is better) Translates to: RHLSSRLADLFL*EILLQTLLQSN Trigger: ATTGCTTTGTAATAGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGGTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| 3UTR-3UTR CAA 90 bp | TTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTATTACAGCCTTTGGACTTTATTaGTCATTTGGCTTCGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: FASGRSLPMGNPITDSITAFGLY*SFGFGV Trigger: CACTCCGAAGCCAAATGACAAATAAAGTCCAAAGGC...TGTAATAGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| 3UTR-3UTR CAA 90 bp | TTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTATTACAGTCTATACATATTATTaGGTTGGTCAGCACAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: FASGRSLPMGNPITDSITVYTYY*VGQHRR Trigger: TCTCCTGTGCTGACCAACCAAATAATATGTATAGAC...TGTAATAGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR TCA 90 bp | AAGGCACCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAACGGGCCGGCGCCTCTaGAGTCACCCGGCTCCTTTA | + |
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Preference number: 4 (lower is better) Translates to: KAPEFASGRSLPMGNPITTGRRL*SHPAPL Trigger: TAAAGGAGCCGGGTGACTTCAGAGGCGCCGGCCCGT...TGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGGTGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR GCA 90 bp | TCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTATTACAACTCGGGCAGGGGCCGTaGTCAGGTGCGGCAGACGGA | + |
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Preference number: 4 (lower is better) Translates to: SRLADLFLWEILLQTLLQLGQGP*SGAADG Trigger: TCCGTCTGCCGCACCTGAGCACGGCCCCTGCCCGAG...TTGTAATAGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR CCA 90 bp | GTGTCTATACATATTATTTGGTTGGTCAGCACAGGAGAAAATGCCTTTGGACTTTCTTGCCAGCGGGTCTaGCGGGCGCCCGGCGCGGAT | + |
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Preference number: 4 (lower is better) Translates to: VSIHIIWLVSTGENAFGLSCQRV*RAPGAD Trigger: ATCCGCGCCGGGCGCCCGCCAGACCCGCTGGCAAGA...AAGTCCAAAGGCATTTTCTCCTGTGCTGACCAACCAAATAATATGTATAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR CCA 90 bp | AAGACAATGGAGCATGCGCCAGGAATGTTCAAAGCTAATCTTTCCCTCCTCCCCTTGGGTAGCTGGGCGTaGAATGGAGCAGCGGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: KTMEHAPGMFKANLSLLPLGSWA*NGAAVV Trigger: GACTACCGCTGCTCCATTCCACGCCCAGCTACCCAA...GGGGAGGAGGGAAAGATTAGCTTTGAACATTCCTGGCGCATGCTCCATTGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR GCA 90 bp | GTGTCTATACATATTATTTGGTTGGTCAGCACAGGAGAAAATGCCTTTGGACTTAGGAGCGCGGCATCTTaGCAGCGGGTCTGGCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: VSIHIIWLVSTGENAFGLRSAAS*QRVWRA Trigger: CGCCCGCCAGACCCGCTGGCAAGATGCCGCGCTCCT...AAGTCCAAAGGCATTTTCTCCTGTGCTGACCAACCAAATAATATGTATAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR GCA 90 bp | AAGACAATGGAGCATGCGCCAGGAATGTTCAAAGCTAATCTTTCCCTCCTCCCCGCATCGCAGTGCAGCTaGTTATGTTTGGCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: KTMEHAPGMFKANLSLLPASQCS*LCLASP Trigger: TGGGCTGGCCAAACATAAGCAGCTGCACTGCGATGC...GGGGAGGAGGGAAAGATTAGCTTTGAACATTCCTGGCGCATGCTCCATTGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR TCA 90 bp | CACCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCACTCGCCCCAAAGATaGGGAGTATCCGGAAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: HLSSRLADLFLWEILLQTHSPQR*GVSGKR Trigger: CCTCTTTCCGGATACTCCTCATCTTTGGGGCGAGTG...AGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR TCA 90 bp | CCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTGAATGGGTCTGCAGATaGGCCCTCAGATTTGACCTG | + |
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Preference number: 4 (lower is better) Translates to: PEFASGRSLPMGNPITDSEWVCR*ALRFDL Trigger: CAGGTCAAATCTGAGGGCTCATCTGCAGACCCATTC...AGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR TCA 90 bp | TTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTATTACAGGGGCTGTATGCTCCTaGGCTGAGGATCTCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: FASGRSLPMGNPITDSITGAVCS*AEDLWL Trigger: CAACCAGAGATCCTCAGCTCAGGAGCATACAGCCCC...TGTAATAGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR GCA 90 bp | CCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTTTGCGTCACTCAGTGTaGTACACAGCAGCCAGATTC | + |
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Preference number: 4 (lower is better) Translates to: PEFASGRSLPMGNPITDSLRHSV*YTAARF Trigger: GAATCTGGCTGCTGTGTAGCACACTGAGTGACGCAA...AGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR TCA 90 bp | AAGGCACCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAATGAGCCCTCAGATTTaGCCTGTCTGCAAATGCTCT | + |
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Preference number: 4 (lower is better) Translates to: KAPEFASGRSLPMGNPITMSPQI*PVCKCS Trigger: AGAGCATTTGCAGACAGGTCAAATCTGAGGGCTCAT...TGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGGTGCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR GCA 90 bp | CCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTTTGGAGGCGTTGAAATaGTTCTTGACCAGGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PEFASGRSLPMGNPITDSLEALK*FLTRKE Trigger: CTCCTTCCTGGTCAAGAAGCATTTCAACGCCTCCAA...AGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR GCA 90 bp | AAAGGCTTTAGTTCAACAATGGCAACCAGACAACCGACATGTAATGGAGTAAACGTGTGGGTCCGAATATaGATCTTCAGGGCGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KGFSSTMATRQPTCNGVNVWVRI*IFRAPR Trigger: CCTGGGCGCCCTGAAGATGCATATTCGGACCCACAC...GTTTACTCCATTACATGTCGGTTGTCTGGTTGCCATTGTTGAACTAAAGCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR GCA 90 bp | AAGGCACCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACACTGCAAATGCTCTGTTaGAGTGAGGGCAAGAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: KAPEFASGRSLPMGNPITLQMLC*SEGKKK Trigger: CTTTTTCTTGCCCTCACTGCAACAGAGCATTTGCAG...TGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGGTGCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR CCA 90 bp | ACTTTATTTGTCATTTGGCTTCGGAGTGAAGAAATGCATTCTGTTCGAGTAAACAGGCCATTGGGTAGCTaGGCGTGGAATGGAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: TLFVIWLRSEEMHSVRVNRPLGS*AWNGAA Trigger: CGCTGCTCCATTCCACGCCCAGCTACCCAATGGCCT...GTTTACTCGAACAGAATGCATTTCTTCACTCCGAAGCCAAATGACAAATAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGACTTTATTTGTCATTTGGCTTCGGAGTGAAGAAATGCATTCTGTTCGAGAGGAGAGAGGCCATTaGGTAGCTGGGCGTGGAATG | + |
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Preference number: 4 (lower is better) Translates to: LWTLFVIWLRSEEMHSVREERGH*VAGRGM Trigger: CATTCCACGCCCAGCTACCCAATGGCCTCTCTCCTC...TCGAACAGAATGCATTTCTTCACTCCGAAGCCAAATGACAAATAAAGTCCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR CCA 90 bp | CACCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTACTTTTCAGCTTCAATaGCATGGGGGTCTGAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: HLSSRLADLFLWEILLQTTFQLQ*HGGLKA Trigger: AGCTTTCAGACCCCCATGCCATTGAAGCTGAAAAGT...AGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR CCA 90 bp | AAGACAATGGAGCATGCGCCAGGAATGTTCAAAGCTAATCTTTCCCTCCTCCCCTTCTGGAGAAGGTTTTaGAGCAGTTTTTGCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: KTMEHAPGMFKANLSLLPFWRRF*SSFCTG Trigger: ACCAGTGCAAAAACTGCTCCAAAACCTTCTCCAGAA...GGGGAGGAGGGAAAGATTAGCTTTGAACATTCCTGGCGCATGCTCCATTGTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR GCA 90 bp | GTGTCTATACATATTATTTGGTTGGTCAGCACAGGAGAAAATGCCTTTGGACTTGACTGGGCATCGCAGTaGAGCTGCTTATGTTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VSIHIIWLVSTGENAFGLDWASQ*SCLCLA Trigger: GGCCAAACATAAGCAGCTGCACTGCGATGCCCAGTC...AAGTCCAAAGGCATTTTCTCCTGTGCTGACCAACCAAATAATATGTATAGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR GCA 90 bp | CACCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCGAGTAAACATTGATTaGGTCACTCAGTGTGCTACA | + |
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Preference number: 4 (lower is better) Translates to: HLSSRLADLFLWEILLQTRVNID*VTQCAT Trigger: TGTAGCACACTGAGTGACGCAATCAATGTTTACTCG...AGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGACTTTATTTGTCATTTGGCTTCGGAGTGAAGAAATGCATTCTGTTCGAAGCCACTGTGGTCCTTaGAGGAGGTGTCAGATGGAG | + |
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Preference number: 4 (lower is better) Translates to: LWTLFVIWLRSEEMHSVRSHCGP*RRCQME Trigger: CTCCATCTGACACCTCCTCCAAGGACCACAGTGGCT...TCGAACAGAATGCATTTCTTCACTCCGAAGCCAAATGACAAATAAAGTCCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR CCA 90 bp | CCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTACACAAGGTAATGTGTaGGTCCGAATATGCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: PEFASGRSLPMGNPITDSTQGNV*VRICIF Trigger: GAAGATGCATATTCGGACCCACACATTACCTTGTGT...AGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR TCA 90 bp | AAAGGCTTTAGTTCAACAATGGCAACCAGACAACCGACATGTAATGGAGTAAACTGTATGCTCCTGAGCTaGGGATCTCTGGTTGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: KGFSSTMATRQPTCNGVNCMLLS*GSLVVV Trigger: TACCACAACCAGAGATCCTCAGCTCAGGAGCATACA...GTTTACTCCATTACATGTCGGTTGTCTGGTTGCCATTGTTGAACTAAAGCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR TCA 90 bp | GTGTCTATACATATTATTTGGTTGGTCAGCACAGGAGAAAATGCCTTTGGACTTACTAATGGGGCTTTCTaGGCCACTGTGGTCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: VSIHIIWLVSTGENAFGLTNGAF*ATVVLG Trigger: TCCAAGGACCACAGTGGCTCAGAAAGCCCCATTAGT...AAGTCCAAAGGCATTTTCTCCTGTGCTGACCAACCAAATAATATGTATAGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR TCA 90 bp | AAGACAATGGAGCATGCGCCAGGAATGTTCAAAGCTAATCTTTCCCTCCTCCCCTTATCTTTAAACACATaGATTCCATGCTCTTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KTMEHAPGMFKANLSLLPLSLNT*IPCSCS Trigger: GCTGCAAGAGCATGGAATTCATGTGTTTAAAGATAA...GGGGAGGAGGGAAAGATTAGCTTTGAACATTCCTGGCGCATGCTCCATTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR GCA 90 bp | CCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTCAGCACAGGAGAAAATaGCTTTGGACTTTATTTGTC | + |
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Preference number: 4 (lower is better) Translates to: PEFASGRSLPMGNPITDSQHRRK*LWTLFV Trigger: GACAAATAAAGTCCAAAGGCATTTTCTCCTGTGCTG...AGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR CCA 90 bp | TTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTATTACAGAGGATCTCTGGTTGTaGTATGACAGGCATGGAGTA | + |
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Preference number: 4 (lower is better) Translates to: FASGRSLPMGNPITDSITEDLWL*YDRHGV Trigger: TACTCCATGCCTGTCATACCACAACCAGAGATCCTC...TGTAATAGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR CCA 90 bp | TTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTATTACAGCAGCTGCTTATGTTTaGCCAGCCCAGAAAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: FASGRSLPMGNPITDSITAAAYV*PAQKKL Trigger: CAACTTTTTCTGGGCTGGCCAAACATAAGCAGCTGC...TGTAATAGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR CCA 90 bp | TTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTATTACAGCAGGAGAGACATTCTaGAGAAGGTTTTGGAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: FASGRSLPMGNPITDSITAGETF*RRFWSS Trigger: ACTGCTCCAAAACCTTCTCCAGAATGTCTCTCCTGC...TGTAATAGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR TCA 90 bp | AAAGGCTTTAGTTCAACAATGGCAACCAGACAACCGACATGTAATGGAGTAAACAATGCTCTGTTGCAGTaGGGGCAAGAAAAAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: KGFSSTMATRQPTCNGVNNALLQ*GQEKGF Trigger: GAAGCCTTTTTCTTGCCCTCACTGCAACAGAGCATT...GTTTACTCCATTACATGTCGGTTGTCTGGTTGCCATTGTTGAACTAAAGCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR TCA 90 bp | TCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTATTACAATGTTCGAGTAAACATTaGTTGCGTCACTCAGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: SRLADLFLWEILLQTLLQCSSKH*LRHSVC Trigger: GCACACTGAGTGACGCAATCAATGTTTACTCGAACA...TTGTAATAGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR GCA 90 bp | GTGTCTATACATATTATTTGGTTGGTCAGCACAGGAGAAAATGCCTTTGGACTTGTCTGGAAAACGCCTTaGCGCAGATCTTGCAAACAC | + |
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Preference number: 4 (lower is better) Translates to: VSIHIIWLVSTGENAFGLVWKTP*RRSCKH Trigger: GTGTTTGCAAGATCTGCGGCAAGGCGTTTTCCAGAC...AAGTCCAAAGGCATTTTCTCCTGTGCTGACCAACCAAATAATATGTATAGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR CCA 90 bp | TTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTATTACACAGTTCGCTGTAGTTTaGCTTTTTGGAGGCGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: FASGRSLPMGNPITDSITQFAVV*LFGGVE Trigger: TTCAACGCCTCCAAAAAGCCAAACTACAGCGAACTG...TGTAATAGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR GCA 90 bp | AAAGGCTTTAGTTCAACAATGGCAACCAGACAACCGACATGTAATGGAGTAAACCCTTGCCGCAGATCTTaGAAACACAAGGTAATGTGT | + |
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Preference number: 4 (lower is better) Translates to: KGFSSTMATRQPTCNGVNPCRRS*KHKVMC Trigger: ACACATTACCTTGTGTTTGCAAGATCTGCGGCAAGG...GTTTACTCCATTACATGTCGGTTGTCTGGTTGCCATTGTTGAACTAAAGCCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR GCA 90 bp | CCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTGGGGTATTGTATTATTaGATTTGTGGTATGCATTTG | + |
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Preference number: 4 (lower is better) Translates to: PEFASGRSLPMGNPITDSGVLYY*ICGMHL Trigger: CAAATGCATACCACAAATGCAATAATACAATACCCC...AGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGACTTTATTTGTCATTTGGCTTCGGAGTGAAGAAATGCATTCTGTTCGAGGGGGTCTGAAAGCTTaGACTGTAGTCTTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWTLFVIWLRSEEMHSVRGGLKA*TVVFPL Trigger: AAGAGGAAAGACTACAGTCCAAGCTTTCAGACCCCC...TCGAACAGAATGCATTTCTTCACTCCGAAGCCAAATGACAAATAAAGTCCAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR CCA 90 bp | CCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTACTTTATTTGTCATTTaGCTTCGGAGTGAAGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PEFASGRSLPMGNPITDSTLFVI*LRSEEM Trigger: CATTTCTTCACTCCGAAGCCAAATGACAAATAAAGT...AGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR CCA 90 bp | AAGGCACCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACATACATATTATTTGGTTaGTCAGCACAGGAGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KAPEFASGRSLPMGNPITYILFG*SAQEKM Trigger: CATTTTCTCCTGTGCTGACCAACCAAATAATATGTA...TGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGGTGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR CCA 90 bp | CACCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTTCTATACATATTATTTaGTTGGTCAGCACAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLSSRLADLFLWEILLQTSIHII*LVSTGE Trigger: TTCTCCTGTGCTGACCAACCAAATAATATGTATAGA...AGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR TCA 90 bp | CTTTGGACTTTATTTGTCATTTGGCTTCGGAGTGAAGAAATGCATTCTGTTCGACATTTGGCTTCGGAGTaGAGAAATGCATTCTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LWTLFVIWLRSEEMHSVRHLASE*RNAFCS Trigger: CGAACAGAATGCATTTCTTCACTCCGAAGCCAAATG...TCGAACAGAATGCATTTCTTCACTCCGAAGCCAAATGACAAATAAAGTCCAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR CCA 90 bp | AAAGGCTTTAGTTCAACAATGGCAACCAGACAACCGACATGTAATGGAGTAAACAAAATAGTAAGACAATaGAGCATGCGCCAGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: KGFSSTMATRQPTCNGVNKIVRQ*SMRQEC Trigger: ACATTCCTGGCGCATGCTCCATTGTCTTACTATTTT...GTTTACTCCATTACATGTCGGTTGTCTGGTTGCCATTGTTGAACTAAAGCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR CCA 90 bp | GTGTCTATACATATTATTTGGTTGGTCAGCACAGGAGAAAATGCCTTTGGACTTGCAGATCTCTTCCTATaGGAAATCCTATTACAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VSIHIIWLVSTGENAFGLADLFL*EILLQT Trigger: AGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGC...AAGTCCAAAGGCATTTTCTCCTGTGCTGACCAACCAAATAATATGTATAGACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR CCA 90 bp | AAAGGCTTTAGTTCAACAATGGCAACCAGACAACCGACATGTAATGGAGTAAACGAGCAGTTTTTGCACTaGTATTTCTTTACATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGFSSTMATRQPTCNGVNEQFLH*YFFTSE Trigger: TTCTGATGTAAAGAAATACCAGTGCAAAAACTGCTC...GTTTACTCCATTACATGTCGGTTGTCTGGTTGCCATTGTTGAACTAAAGCCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS TCA 90 bp | GCAGGGGCCGTGCTCAGGTGCGGCAGACGGACGGGCCGGCGCCTCTaGAGTCACCCGGCTCCTTTACGAACTGAGCCCGTTTTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGAVLRCGRRTGRRL*SHPAPLRTEPVLAG Trigger: CCCAGCCAAAACGGGCTCAGTTCGTAAAGGAGCCGGGTGACTTCAGAGGCGCCGGCCCGTCCGTCTGCCGCACCTGAGCACGGCCCCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396822.6 |
||
| CDS CCA 90 bp | GAGGAGTATCCGGAAAGAGGAGAGAGGCCATTGGGTAGCTGGGCGTaGAATGGAGCAGCGGTAGTCCACACAGTGATGGGGCTGTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: EEYPERGERPLGSWA*NGAAVVHTVMGLYA Trigger: AGCATACAGCCCCATCACTGTGTGGACTACCGCTGCTCCATTCCACGCCCAGCTACCCAATGGCCTCTCTCCTCTTTCCGGATACTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000020945.4 ENST00000396822.6 ENST00000649776.1 |
||
| CDS CCA 90 bp | TGTAGTCTTTCCTCTTCATCACTAATGGGGCTTTCTGAGCCACTGTaGTCCTTGGAGGAGGTGTCAGATGGAGGAGGGGGACTCACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: CSLSSSSLMGLSEPL*SLEEVSDGGGGLTR Trigger: GCGAGTGAGTCCCCCTCCTCCATCTGACACCTCCTCCAAGGACCACAGTGGCTCAGAAAGCCCCATTAGTGATGAAGAGGAAAGACTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
||
| CDS TCA 90 bp | GAATGGAGCAGCGGTAGTCCACACAGTGATGGGGCTGTATGCTCCTaGGCTGAGGATCTCTGGTTGTGGTATGACAGGCATGGAGTAACT | + |
|
Preference number: 5 (lower is better) Translates to: EWSSGSPHSDGAVCS*AEDLWLWYDRHGVT Trigger: AGTTACTCCATGCCTGTCATACCACAACCAGAGATCCTCAGCTCAGGAGCATACAGCCCCATCACTGTGTGGACTACCGCTGCTCCATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000020945.4 ENST00000396822.6 ENST00000649776.1 |
||
| CDS-3UTR CAA 90 bp | GTGTCTATACATATTATTTGGTTGGTCAGCACAGGAGAAAATGCCTTTGGACTTAAGGAGCGCGGCATCTaGCCAGCGGGTCTGGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VSIHIIWLVSTGENAFGLKERGI*PAGLAG Trigger: GCCCGCCAGACCCGCTGGCAAGATGCCGCGCTCCTT...AAGTCCAAAGGCATTTTCTCCTGTGCTGACCAACCAAATAATATGTATAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR CAA 90 bp | CCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTTGCAGCTGCTTATGTTaGGCCAGCCCAGAAAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PEFASGRSLPMGNPITDSCSCLC*ASPEKV Trigger: AACTTTTTCTGGGCTGGCCAAACATAAGCAGCTGCA...AGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS CCA 90 bp | ATACGGGGAAATAATCACTGTATGTGTGTCCAGTTCGCTGTAGTTTaGCTTTTTGGAGGCGTTGAAATGCTTCTTGACCAGGAAGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: IRGNNHCMCVQFAVV*LFGGVEMLLDQEGA Trigger: CGCTCCTTCCTGGTCAAGAAGCATTTCAACGCCTCCAAAAAGCCAAACTACAGCGAACTGGACACACATACAGTGATTATTTCCCCGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000020945.4 ENST00000396822.6 ENST00000649776.1 |
||
| CDS-3UTR CAA 90 bp | CTTTGGACTTTATTTGTCATTTGGCTTCGGAGTGAAGAAATGCATTCTGTTCGAGCGTTGAAATGCTTCTaGACCAGGAAGGAGCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LWTLFVIWLRSEEMHSVRALKCF*TRKERG Trigger: GCCGCGCTCCTTCCTGGTCAAGAAGCATTTCAACGC...TCGAACAGAATGCATTTCTTCACTCCGAAGCCAAATGACAAATAAAGTCCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR CAA 90 bp | GTGTCTATACATATTATTTGGTTGGTCAGCACAGGAGAAAATGCCTTTGGACTTAGAGGAGAGAGGCCATaGGGTAGCTGGGCGTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VSIHIIWLVSTGENAFGLRGERP*GSWAWN Trigger: ATTCCACGCCCAGCTACCCAATGGCCTCTCTCCTCT...AAGTCCAAAGGCATTTTCTCCTGTGCTGACCAACCAAATAATATGTATAGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR CAA 90 bp | AAGGCACCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAATTCTGGAGAAGGTTTaGGAGCAGTTTTTGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: KAPEFASGRSLPMGNPITILEKV*EQFLHW Trigger: CCAGTGCAAAAACTGCTCCAAAACCTTCTCCAGAAT...TGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGGTGCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS TCA 90 bp | GTATTTCTTTACATCAGAATGGGTCTGCAGATGAGCCCTCAGATTTaGCCTGTCTGCAAATGCTCTGTTGCAGTGAGGGCAAGAAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VFLYIRMGLQMSPQI*PVCKCSVAVRARKR Trigger: CCTTTTTCTTGCCCTCACTGCAACAGAGCATTTGCAGACAGGTCAAATCTGAGGGCTCATCTGCAGACCCATTCTGATGTAAAGAAATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
||
| CDS GCA 90 bp | TGGCTTCGGAGTGAAGAAATGCATTCTGTTCGAGTAAACATTGATTaGGTCACTCAGTGTGCTACACAGCAGCCAGATTCCTCATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WLRSEEMHSVRVNID*VTQCATQQPDSSCL Trigger: CAAACATGAGGAATCTGGCTGCTGTGTAGCACACTGAGTGACGCAATCAATGTTTACTCGAACAGAATGCATTTCTTCACTCCGAAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
||
| CDS GCA 90 bp | GCAGTCCCTGGAGCAGAGGTTGTTAGCAAGAAATGGAGCACTTTGTaGCCTAACAACTTTTTGAGTAGTCAGGAAGTAGCTATCAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: AVPGAEVVSKKWSTL*PNNFLSSQEVAIND Trigger: GTCATTGATAGCTACTTCCTGACTACTCAAAAAGTTGTTAGGGCACAAAGTGCTCCATTTCTTGCTAACAACCTCTGCTCCAGGGACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649776.1 |
||
| CDS-3UTR CAA 90 bp | TTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTATTACAGGCTTTTTGGAGGCGTaGAAATGCTTCTTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FASGRSLPMGNPITDSITGFLEA*KCFLTR Trigger: CCTGGTCAAGAAGCATTTCAACGCCTCCAAAAAGCC...TGTAATAGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR CAA 90 bp | CCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTAGGCTCACATATTCCTaGTCACAGTATTTACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PEFASGRSLPMGNPITDSRLTYS*SQYLQL Trigger: CAGCTGTAAATACTGTGACAAGGAATATGTGAGCCT...AGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR CAA 90 bp | TCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGACTCTATTACAAGCCTTGCCGCAGATCTaGCAAACACAAGGTAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRLADLFLWEILLQTLLQALPQI*QTQGNV Trigger: CACATTACCTTGTGTTTGCAAGATCTGCGGCAAGGC...TTGTAATAGAGTCTGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS CCA 90 bp | TACATGCTGTTTGCAGTCCCTGGAGCAGAGGTTGTTAGCAAGAAATaGAGCACTTTGTGCCCTAACAACTTTTTGAGTAGTCAGGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: YMLFAVPGAEVVSKK*STLCPNNFLSSQEV Trigger: TACTTCCTGACTACTCAAAAAGTTGTTAGGGCACAAAGTGCTCCATTTCTTGCTAACAACCTCTGCTCCAGGGACTGCAAACAGCATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649776.1 |
||
| CDS-3UTR CAA 90 bp | CTTTGGACTTTATTTGTCATTTGGCTTCGGAGTGAAGAAATGCATTCTGTTCGAGCTGAGGATCTCTGGTaGTGGTATGACAGGCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: LWTLFVIWLRSEEMHSVRAEDLW*WYDRHG Trigger: TCCATGCCTGTCATACCACAACCAGAGATCCTCAGC...TCGAACAGAATGCATTTCTTCACTCCGAAGCCAAATGACAAATAAAGTCCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR CAA 90 bp | AAAGGCTTTAGTTCAACAATGGCAACCAGACAACCGACATGTAATGGAGTAAACTGGGGGTCTGAAAGCTaGGACTGTAGTCTTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KGFSSTMATRQPTCNGVNWGSES*DCSLSS Trigger: AGAGGAAAGACTACAGTCCAAGCTTTCAGACCCCCA...GTTTACTCCATTACATGTCGGTTGTCTGGTTGCCATTGTTGAACTAAAGCCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS CCA 90 bp | ACATATTCCTTGTCACAGTATTTACAGCTGAAAGATTTTCTAGACTaGGCATCGCAGTGCAGCTGCTTATGTTTGGCCAGCCCAGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TYSLSQYLQLKDFLD*ASQCSCLCLASPEK Trigger: TTTTTCTGGGCTGGCCAAACATAAGCAGCTGCACTGCGATGCCCAGTCTAGAAAATCTTTCAGCTGTAAATACTGTGACAAGGAATATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
||
| CDS-3UTR CAA 90 bp | AAGGCACCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACAGTTTTGGAGCAGTTTTaGCACTGGTATTTCTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: KAPEFASGRSLPMGNPITVLEQF*HWYFFT Trigger: TGTAAAGAAATACCAGTGCAAAAACTGCTCCAAAAC...TGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGGTGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR CAA 90 bp | AAGGCACCTGAGTTCGCGTCTGGCAGATCTCTTCCTATGGGAAATCCTATTACATCTTTGTACAGTGGTTaGGTACTAATCATGAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KAPEFASGRSLPMGNPITSLYSG*VLIMKQ Trigger: TTGCTTCATGATTAGTACCAAACCACTGTACAAAGA...TGTAATAGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGGTGCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR CAA 90 bp | GTGTCTATACATATTATTTGGTTGGTCAGCACAGGAGAAAATGCCTTTGGACTTGCCTTTGGACTTTATTaGTCATTTGGCTTCGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VSIHIIWLVSTGENAFGLAFGLY*SFGFGV Trigger: CACTCCGAAGCCAAATGACAAATAAAGTCCAAAGGC...AAGTCCAAAGGCATTTTCTCCTGTGCTGACCAACCAAATAATATGTATAGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS CCA 90 bp | AATAGGTCTTATTGCATAAATTGCACTGAAACTTTTCAGCTTCAATaGCATGGGGGTCTGAAAGCTTGGACTGTAGTCTTTCCTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: NRSYCINCTETFQLQ*HGGLKAWTVVFPLH Trigger: ATGAAGAGGAAAGACTACAGTCCAAGCTTTCAGACCCCCATGCCATTGAAGCTGAAAAGTTTCAGTGCAATTTATGCAATAAGACCTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
||
| CDS-3UTR CAA 90 bp | AAAGGCTTTAGTTCAACAATGGCAACCAGACAACCGACATGTAATGGAGTAAACCCAGCCCAGAAAAAGTaGAATAGGTCTTATTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: KGFSSTMATRQPTCNGVNPAQKK*NRSYCI Trigger: TATGCAATAAGACCTATTCAACTTTTTCTGGGCTGG...GTTTACTCCATTACATGTCGGTTGTCTGGTTGCCATTGTTGAACTAAAGCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR CAA 90 bp | AAAGGCTTTAGTTCAACAATGGCAACCAGACAACCGACATGTAATGGAGTAAACCACTTGGAAGGGGTATaGTATTATTGCATTTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KGFSSTMATRQPTCNGVNHLEGV*YYCICG Trigger: ACCACAAATGCAATAATACAATACCCCTTCCAAGTG...GTTTACTCCATTACATGTCGGTTGTCTGGTTGCCATTGTTGAACTAAAGCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS-3UTR CAA 90 bp | ACTTTATTTGTCATTTGGCTTCGGAGTGAAGAAATGCATTCTGTTCGAGTAAACGTCTATACATATTATTaGGTTGGTCAGCACAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLFVIWLRSEEMHSVRVNVYTYY*VGQHRR Trigger: TCTCCTGTGCTGACCAACCAAATAATATGTATAGAC...GTTTACTCGAACAGAATGCATTTCTTCACTCCGAAGCCAAATGACAAATAAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000020945.4 |
||
| CDS TCA 72 bp | GTGCTCAGGTGCGGCAGACGGACGGGCCGGCGCCTCTaGAGTCACCCGGCTCCTTTACGAACTGAGCCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: VLRCGRRTGRRL*SHPAPLRTEPV Trigger: AACGGGCTCAGTTCGTAAAGGAGCCGGGTGACTTCAGAGGCGCCGGCCCGTCCGTCTGCCGCACCTGAGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396822.6 ENST00000649776.1 |
||
| CDS CCA 72 bp | CCGGAAAGAGGAGAGAGGCCATTGGGTAGCTGGGCGTaGAATGGAGCAGCGGTAGTCCACACAGTGATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PERGERPLGSWA*NGAAVVHTVMG Trigger: CCCCATCACTGTGTGGACTACCGCTGCTCCATTCCACGCCCAGCTACCCAATGGCCTCTCTCCTCTTTCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000020945.4 ENST00000396822.6 ENST00000649776.1 |
||
| CDS TCA 72 bp | GTCAGATGGAGGAGGGGGACTCACTCGCCCCAAAGATaGGGAGTATCCGGAAAGAGGAGAGAGGCCATTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VRWRRGTHSPQR*GVSGKRREAIG Trigger: CCCAATGGCCTCTCTCCTCTTTCCGGATACTCCTCATCTTTGGGGCGAGTGAGTCCCCCTCCTCCATCTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
||
| CDS CCA 72 bp | GAGTATCCGGAAAGAGGAGAGAGGCCATTGGGTAGCTaGGCGTGGAATGGAGCAGCGGTAGTCCACACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: EYPERGERPLGS*AWNGAAVVHTV Trigger: CACTGTGTGGACTACCGCTGCTCCATTCCACGCCCAGCTACCCAATGGCCTCTCTCCTCTTTCCGGATACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000020945.4 ENST00000396822.6 ENST00000649776.1 |
||
| CDS TCA 72 bp | AGCGGTAGTCCACACAGTGATGGGGCTGTATGCTCCTaGGCTGAGGATCTCTGGTTGTGGTATGACAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SGSPHSDGAVCS*AEDLWLWYDRH Trigger: ATGCCTGTCATACCACAACCAGAGATCCTCAGCTCAGGAGCATACAGCCCCATCACTGTGTGGACTACCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000020945.4 ENST00000396822.6 ENST00000649776.1 |
||
| CDS TCA 72 bp | TACATCAGAATGGGTCTGCAGATGAGCCCTCAGATTTaGCCTGTCTGCAAATGCTCTGTTGCAGTGAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: YIRMGLQMSPQI*PVCKCSVAVRA Trigger: TGCCCTCACTGCAACAGAGCATTTGCAGACAGGTCAAATCTGAGGGCTCATCTGCAGACCCATTCTGATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
||
| CDS GCA 72 bp | ATCTTGCAAACACAAGGTAATGTGTGGGTCCGAATATaGATCTTCAGGGCGCCCAGGCTCACATATTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ILQTQGNVWVRI*IFRAPRLTYSL Trigger: CAAGGAATATGTGAGCCTGGGCGCCCTGAAGATGCATATTCGGACCCACACATTACCTTGTGTTTGCAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
||
| CDS CAA 90 bp | TGGGTCCGAATATGCATCTTCAGGGCGCCCAGGCTCACATATTCCTaGTCACAGTATTTACAGCTGAAAGATTTTCTAGACTGGGCATCG | + |
|
Preference number: 6 (lower is better) Translates to: WVRICIFRAPRLTYS*SQYLQLKDFLDWAS Trigger: CGATGCCCAGTCTAGAAAATCTTTCAGCTGTAAATACTGTGACAAGGAATATGTGAGCCTGGGCGCCCTGAAGATGCATATTCGGACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
||
| CDS CAA 90 bp | GGTATTTCTTTACATCAGAATGGGTCTGCAGATGAGCCCTCAGATTaGACCTGTCTGCAAATGCTCTGTTGCAGTGAGGGCAAGAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GISLHQNGSADEPSD*TCLQMLCCSEGKKK Trigger: CTTTTTCTTGCCCTCACTGCAACAGAGCATTTGCAGACAGGTCAAATCTGAGGGCTCATCTGCAGACCCATTCTGATGTAAAGAAATACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
||
| CDS TCA 72 bp | CACTGGTATTTCTTTACATCAGAATGGGTCTGCAGATaGGCCCTCAGATTTGACCTGTCTGCAAATGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HWYFFTSEWVCR*ALRFDLSANAL Trigger: CAGAGCATTTGCAGACAGGTCAAATCTGAGGGCTCATCTGCAGACCCATTCTGATGTAAAGAAATACCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
||
| CDS TCA 72 bp | TTTTCCTCTCTTTTGCAAGAAAGATCCAATCACAGCTaGGAGGTTCAGATTTCAGCTCCTCCCTCTGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: FSSLLQERSNHS*EVQISAPPSGT Trigger: TGTCCCAGAGGGAGGAGCTGAAATCTGAACCTCTCAGCTGTGATTGGATCTTTCTTGCAAAAGAGAGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396822.6 |
||
| CDS GCA 72 bp | TTACAGCTGAAAGATTTTCTAGACTGGGCATCGCAGTaGAGCTGCTTATGTTTGGCCAGCCCAGAAAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: LQLKDFLDWASQ*SCLCLASPEKV Trigger: AACTTTTTCTGGGCTGGCCAAACATAAGCAGCTGCACTGCGATGCCCAGTCTAGAAAATCTTTCAGCTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
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| CDS GCA 72 bp | AGTGAAGAAATGCATTCTGTTCGAGTAAACATTGATTaGGTCACTCAGTGTGCTACACAGCAGCCAGATTCC | + |
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Preference number: 6 (lower is better) Translates to: SEEMHSVRVNID*VTQCATQQPDS Trigger: GGAATCTGGCTGCTGTGTAGCACACTGAGTGACGCAATCAATGTTTACTCGAACAGAATGCATTTCTTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
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| CDS CAA 90 bp | GGGCATCGCAGTGCAGCTGCTTATGTTTGGCCAGCCCAGAAAAAGTaGAATAGGTCTTATTGCATAAATTGCACTGAAACTTTTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GHRSAAAYVWPAQKK*NRSYCINCTETFQL Trigger: AAGCTGAAAAGTTTCAGTGCAATTTATGCAATAAGACCTATTCAACTTTTTCTGGGCTGGCCAAACATAAGCAGCTGCACTGCGATGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
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| CDS CAA 90 bp | TTTGCAGTCCCTGGAGCAGAGGTTGTTAGCAAGAAATGGAGCACTTaGTGCCCTAACAACTTTTTGAGTAGTCAGGAAGTAGCTATCAAT | + |
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Preference number: 6 (lower is better) Translates to: FAVPGAEVVSKKWST*CPNNFLSSQEVAIN Trigger: ATTGATAGCTACTTCCTGACTACTCAAAAAGTTGTTAGGGCACAAAGTGCTCCATTTCTTGCTAACAACCTCTGCTCCAGGGACTGCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649776.1 |
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| CDS CCA 72 bp | TATTGCATAAATTGCACTGAAACTTTTCAGCTTCAATaGCATGGGGGTCTGAAAGCTTGGACTGTAGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: YCINCTETFQLQ*HGGLKAWTVVF Trigger: AAAGACTACAGTCCAAGCTTTCAGACCCCCATGCCATTGAAGCTGAAAAGTTTCAGTGCAATTTATGCAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
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| CDS CAA 72 bp | AGTGCAGCTGCTTATGTTTGGCCAGCCCAGAAAAAGTaGAATAGGTCTTATTGCATAAATTGCACTGAAACT | + |
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Preference number: 6 (lower is better) Translates to: SAAAYVWPAQKK*NRSYCINCTET Trigger: AGTTTCAGTGCAATTTATGCAATAAGACCTATTCAACTTTTTCTGGGCTGGCCAAACATAAGCAGCTGCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
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| CDS CAA 90 bp | GAGGTTGTTAGCAAGAAATGGAGCACTTTGTGCCCTAACAACTTTTaGAGTAGTCAGGAAGTAGCTATCAATGACTGTCCATCATTAAAA | + |
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Preference number: 6 (lower is better) Translates to: EVVSKKWSTLCPNNF*SSQEVAINDCPSLK Trigger: TTTTAATGATGGACAGTCATTGATAGCTACTTCCTGACTACTCAAAAAGTTGTTAGGGCACAAAGTGCTCCATTTCTTGCTAACAACCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649776.1 |
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| CDS GCA 72 bp | GTTTGGCCAGCCCAGAAAAAGTTGAATAGGTCTTATTaGATAAATTGCACTGAAACTTTTCAGCTTCAATGG | + |
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Preference number: 6 (lower is better) Translates to: VWPAQKKLNRSY*INCTETFQLQW Trigger: CCATTGAAGCTGAAAAGTTTCAGTGCAATTTATGCAATAAGACCTATTCAACTTTTTCTGGGCTGGCCAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000020945.4 ENST00000649776.1 |
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