RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMPD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000103056

Ensembl transcript IDs: ENST00000219334.10, ENST00000561749.1, ENST00000563226.1, ENST00000563396.1, ENST00000563455.1, ENST00000566009.5, ENST00000566723.1, ENST00000567223.6, ENST00000567811.1, ENST00000568373.5, ENST00000574662.1

Found 708 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGGCAGAGAGCCCAGCAGGATGCTCGCCCTCAGCAGCCCCTTCCTaGCTCTGGACTCTGGAGGGGCAGGGCTTGGGCCCGGGCAGACGG +
Preference number: 1 (lower is better)
Translates to: RAESPAGCSPSAAPS*LWTLEGQGLGPGRR
Trigger: CCGTCTGCCCGGGCCCAAGCCCTGCCCCTCCAGAGTCCAGAGCCAGGAAGGGGCTGCTGAGGGCGAGCATCCTGCTGGGCTCTCTGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR GCA 90 bp AGAGTGGCCTGGGGCGTGGGGTTTCAGGGAGCGGCTGTCGAGAGCTaGAGGGCCCGGGCCCTGCTCTCTCTTTGCATGGCCCTGGCTGCT +
Preference number: 1 (lower is better)
Translates to: RVAWGVGFQGAAVES*RARALLSLCMALAA
Trigger: AGCAGCCAGGGCCATGCAAAGAGAGAGCAGGGCCCGGGCCCTGCAGCTCTCGACAGCCGCTCCCTGAAACCCCACGCCCCAGGCCACTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR TCA 90 bp AGGGGCAGGGCTTGGGCCCGGGCAGACGGTGCTTCCCAGGCCAGGTaGGTTCAGACAGGCCAGTGTCACAAGGACGCACGTCCTAGCGCC +
Preference number: 1 (lower is better)
Translates to: RGRAWARADGASQAR*VQTGQCHKDARPSA
Trigger: GGCGCTAGGACGTGCGTCCTTGTGACACTGGCCTGTCTGAACTCACCTGGCCTGGGAAGCACCGTCTGCCCGGGCCCAAGCCCTGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CCA 90 bp TTGGGTGAGGCCCGAGCAAGGGGTCTGTGGCTACAGCGTGGCACGTaGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGACG +
Preference number: 1 (lower is better)
Translates to: LGEARARGLWLQRGT*HAGSVHARVQACET
Trigger: CGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAGCCACAGACCCCTTGCTCGGGCCTCACCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR GCA 90 bp ATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTaGCAGAGCCTGCCAGACTCTGTTGTGCCTGAGCTGGGGAAGGGA +
Preference number: 1 (lower is better)
Translates to: MAPLPRWEAPGGGPG*QSLPDSVVPELGKG
Trigger: TCCCTTCCCCAGCTCAGGCACAACAGAGTCTGGCAGGCTCTGGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR GCA 90 bp GCAGCTGCAAGGGCTGGCAGAGGCCCCGCTGCTCCGGACGGTCTATaGCTCCTCCTCCCCCGAAGACACCATCAGTCGCATGGCTACTGG +
Preference number: 1 (lower is better)
Translates to: AAARAGRGPAAPDGL*LLLPRRHHQSHGYW
Trigger: CCAGTAGCCATGCGACTGATGGTGTCTTCGGGGGAGGAGGAGGCATAGACCGTCCGGAGCAGCGGGGCCTCTGCCAGCCCTTGCAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR CCA 90 bp CCTGGGCTCTGCAGCGTTGTCTGCCCCAGCACAGGGCCAGGCATCTaGCTGGCTGCGTGGCCCCCTCTTGGTCCCTCTTGCAGCTCAATG +
Preference number: 1 (lower is better)
Translates to: PGLCSVVCPSTGPGI*LAAWPPLGPSCSSM
Trigger: CATTGAGCTGCAAGAGGGACCAAGAGGGGGCCACGCAGCCAGCCAGATGCCTGGCCCTGTGCTGGGGCAGACAACGCTGCAGAGCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR GCA 90 bp TGGCTCTGGACTCTGGAGGGGCAGGGCTTGGGCCCGGGCAGACGGTaGTTCCCAGGCCAGGTGAGTTCAGACAGGCCAGTGTCACAAGGA +
Preference number: 1 (lower is better)
Translates to: WLWTLEGQGLGPGRR*FPGQVSSDRPVSQG
Trigger: TCCTTGTGACACTGGCCTGTCTGAACTCACCTGGCCTGGGAAGCACCGTCTGCCCGGGCCCAAGCCCTGCCCCTCCAGAGTCCAGAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CCA 90 bp CCCTCGGACCCTGCAGGAGCCGGCCCACACTGGAGGCGGGAGAGCTaGTGGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGT +
Preference number: 1 (lower is better)
Translates to: PSDPAGAGPHWRRES*WPCPGSASLAGSDC
Trigger: ACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCACCAGCTCTCCCGCCTCCAGTGTGGGCCGGCTCCTGCAGGGTCCGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR GCA 90 bp CAAGGGGTCTGTGGCTACAGCGTGGCACGTGGCATGCGGGCAGCGTaGATGCGAGGGTGCAGGCATGCGAGACGACATTGGCAGCAGACA +
Preference number: 1 (lower is better)
Translates to: QGVCGYSVARGMRAA*MRGCRHARRHWQQT
Trigger: TGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAGCCACAGACCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR GCA 90 bp CTCCCGGAGGAGGCCCAGGGTGCCAGAGCCTGCCAGACTCTGTTGTaGCTGAGCTGGGGAAGGGACCCTGTCTCGGGAAGAGCAAAGTTC +
Preference number: 1 (lower is better)
Translates to: LPEEAQGARACQTLL*LSWGRDPVSGRAKF
Trigger: GAACTTTGCTCTTCCCGAGACAGGGTCCCTTCCCCAGCTCAGGCACAACAGAGTCTGGCAGGCTCTGGCACCCTGGGCCTCCTCCGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CCA 90 bp TGTGTTTGGAGTTTGGCCTTGGGTGAGGCCCGAGCAAGGGGTCTGTaGCTACAGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGG +
Preference number: 1 (lower is better)
Translates to: CVWSLALGEARARGL*LQRGTWHAGSVHAR
Trigger: CCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAGCCACAGACCCCTTGCTCGGGCCTCACCCAAGGCCAAACTCCAAACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR CCA 90 bp GGATACTCTCTTCTCGGATCCCCGTTTATGGCTCCACTGCCCAGATaGGAGGCTCCCGGAGGAGGCCCAGGGTGCCAGAGCCTGCCAGAC +
Preference number: 1 (lower is better)
Translates to: GYSLLGSPFMAPLPR*EAPGGGPGCQSLPD
Trigger: GTCTGGCAGGCTCTGGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATCCGAGAAGAGAGTATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CCA 90 bp TCGGACCCTGCAGGAGCCGGCCCACACTGGAGGCGGGAGAGCTGGTaGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTT +
Preference number: 1 (lower is better)
Translates to: SDPAGAGPHWRRESW*PCPGSASLAGSDCV
Trigger: AACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCACCAGCTCTCCCGCCTCCAGTGTGGGCCGGCTCCTGCAGGGTCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR TCA 90 bp CGGAGGAGGCCCAGGGTGCCAGAGCCTGCCAGACTCTGTTGTGCCTaGGCTGGGGAAGGGACCCTGTCTCGGGAAGAGCAAAGTTCTATG +
Preference number: 1 (lower is better)
Translates to: RRRPRVPEPARLCCA*AGEGTLSREEQSSM
Trigger: CATAGAACTTTGCTCTTCCCGAGACAGGGTCCCTTCCCCAGCTCAGGCACAACAGAGTCTGGCAGGCTCTGGCACCCTGGGCCTCCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR GCA 90 bp GGGTCTGTGGCTACAGCGTGGCACGTGGCATGCGGGCAGCGTGCATaGGAGGGTGCAGGCATGCGAGACGACATTGGCAGCAGACAAAAA +
Preference number: 1 (lower is better)
Translates to: GSVATAWHVACGQRA*EGAGMRDDIGSRQK
Trigger: TTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAGCCACAGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR GCA 90 bp TGCCATGCTGAACTTGGGTGCCAGTACCACACCCTGCCCTGGGCATaGAGCAACTGTCAGCCTTGCTGCCCCAGCTTGCGCACTGGTGAG +
Preference number: 1 (lower is better)
Translates to: CHAELGCQYHTLPWA*SNCQPCCPSLRTGE
Trigger: CTCACCAGTGCGCAAGCTGGGGCAGCAAGGCTGACAGTTGCTGCATGCCCAGGGCAGGGTGTGGTACTGGCACCCAAGTTCAGCATGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR GCA 90 bp TTGGCCAGCTCTGCCATGCTGAACTTGGGTGCCAGTACCACACCCTaGCCTGGGCATGCAGCAACTGTCAGCCTTGCTGCCCCAGCTTGC +
Preference number: 1 (lower is better)
Translates to: LASSAMLNLGASTTP*PGHAATVSLAAPAC
Trigger: GCAAGCTGGGGCAGCAAGGCTGACAGTTGCTGCATGCCCAGGGCAGGGTGTGGTACTGGCACCCAAGTTCAGCATGGCAGAGCTGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR GCA 90 bp CGGGGACCACAAGCTGTTGGCCAGCTCTGCCATGCTGAACTTGGGTaGCAGTACCACACCCTGCCCTGGGCATGCAGCAACTGTCAGCCT +
Preference number: 1 (lower is better)
Translates to: RGPQAVGQLCHAELG*QYHTLPWACSNCQP
Trigger: AGGCTGACAGTTGCTGCATGCCCAGGGCAGGGTGTGGTACTGGCACCCAAGTTCAGCATGGCAGAGCTGGCCAACAGCTTGTGGTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CCA 90 bp CAGCTCTGCCATGCTGAACTTGGGTGCCAGTACCACACCCTGCCCTaGGCATGCAGCAACTGTCAGCCTTGCTGCCCCAGCTTGCGCACT +
Preference number: 1 (lower is better)
Translates to: QLCHAELGCQYHTLP*ACSNCQPCCPSLRT
Trigger: AGTGCGCAAGCTGGGGCAGCAAGGCTGACAGTTGCTGCATGCCCAGGGCAGGGTGTGGTACTGGCACCCAAGTTCAGCATGGCAGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR TCA 90 bp AGACTGGGCCTAGGGCAGGAACAGAGTCTTGGTATGGGCCTCGGGTaGCCCGTGTGCCCACCCCTGCTAGGCCTTAGATGCCACAGAATC +
Preference number: 1 (lower is better)
Translates to: RLGLGQEQSLGMGLG*PVCPPLLGLRCHRI
Trigger: GATTCTGTGGCATCTAAGGCCTAGCAGGGGTGGGCACACGGGTCACCCGAGGCCCATACCAAGACTCTGTTCCTGCCCTAGGCCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR GCA 90 bp CGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATaGGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACG +
Preference number: 1 (lower is better)
Translates to: RGTWHAGSVHARVQA*ETTLAADKNKEPWT
Trigger: CGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR GCA 90 bp GGCTACAGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTaGAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAAC +
Preference number: 1 (lower is better)
Translates to: GYSVARGMRAACMRG*RHARRHWQQTKIKN
Trigger: GTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR CCA 90 bp GGCCCAGTCGCTTGTGTGAGCAGAGTACCAGCTGCTTCTGGAAGTTaGGGGCCTCCACATCATGAATCCCAGTCAAGGCTCACAGGCCAG +
Preference number: 1 (lower is better)
Translates to: GPVACVSRVPAASGS*GPPHHESQSRLTGQ
Trigger: CTGGCCTGTGAGCCTTGACTGGGATTCATGATGTGGAGGCCCCCAACTTCCAGAAGCAGCTGGTACTCTGCTCACACAAGCGACTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CCA 90 bp CTATGCCTCCTCCTCCCCCGAAGACACCATCAGTCGCATGGCTACTaGCAGGTGGTCCGTCAGGCCGGACAGCTGGGTGATAAAACTGAA +
Preference number: 1 (lower is better)
Translates to: LCLLLPRRHHQSHGY*QVVRQAGQLGDKTE
Trigger: TTCAGTTTTATCACCCAGCTGTCCGGCCTGACGGACCACCTGCCAGTAGCCATGCGACTGATGGTGTCTTCGGGGGAGGAGGAGGCATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR CCA 90 bp GCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTaGCCTTGGGTGAGGCCCGAGCAAGGGGTCTGTGGCTACAGCGTG +
Preference number: 1 (lower is better)
Translates to: AQEVLLWLVLIVFGV*PWVRPEQGVCGYSV
Trigger: CACGCTGTAGCCACAGACCCCTTGCTCGGGCCTCACCCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR CCA 90 bp TGGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTaGAGTTTGGCCTTGGGTGAGGCCCGAGCAAGGGGTCTGTGGCTA +
Preference number: 1 (lower is better)
Translates to: WPCPGSASLAGSDCV*SLALGEARARGLWL
Trigger: TAGCCACAGACCCCTTGCTCGGGCCTCACCCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR CCA 90 bp ATCAGTCGCATGGCTACTGGCAGGTGGTCCGTCAGGCCGGACAGCTaGGTGATAAAACTGAATTCTTCCACCTCCTGGGGTGAGTGGGAG +
Preference number: 1 (lower is better)
Translates to: ISRMATGRWSVRPDS*VIKLNSSTSWGEWE
Trigger: CTCCCACTCACCCCAGGAGGTGGAAGAATTCAGTTTTATCACCCAGCTGTCCGGCCTGACGGACCACCTGCCAGTAGCCATGCGACTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR CCA 90 bp TCCTCCTCCCCCGAAGACACCATCAGTCGCATGGCTACTGGCAGGTaGTCCGTCAGGCCGGACAGCTGGGTGATAAAACTGAATTCTTCC +
Preference number: 1 (lower is better)
Translates to: SSSPEDTISRMATGR*SVRPDSWVIKLNSS
Trigger: GGAAGAATTCAGTTTTATCACCCAGCTGTCCGGCCTGACGGACCACCTGCCAGTAGCCATGCGACTGATGGTGTCTTCGGGGGAGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR CCA 90 bp GAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTTaGGTGAGGCCCGAGCAAGGGGTCTGTGGCTACAGCGTGGCACGT +
Preference number: 1 (lower is better)
Translates to: EVLLWLVLIVFGVWP*VRPEQGVCGYSVAR
Trigger: ACGTGCCACGCTGTAGCCACAGACCCCTTGCTCGGGCCTCACCCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR CCA 90 bp ATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGACGACATTaGCAGCAGACAAAAATAAAGAACCCTGGACGAAGCTTAAGAGGA +
Preference number: 1 (lower is better)
Translates to: MRAACMRGCRHARRH*QQTKIKNPGRSLRG
Trigger: TCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR TCA 90 bp CCTGAGCTGGGGAAGGGACCCTGTCTCGGGAAGAGCAAAGTTCTATaGGTGACTTACAGACCCTGTGAAGTGAGGGTTGGTTTTGTGATT +
Preference number: 1 (lower is better)
Translates to: PELGKGPCLGKSKVL*VTYRPCEVRVGFVI
Trigger: AATCACAAAACCAACCCTCACTTCACAGGGTCTGTAAGTCACTCATAGAACTTTGCTCTTCCCGAGACAGGGTCCCTTCCCCAGCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CCA 90 bp CAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTaGACGAAGCTTAAGAGGAGATACAGAGAGTACACGAACCCGGTC +
Preference number: 1 (lower is better)
Translates to: QACETTLAADKNKEP*TKLKRRYREYTNPV
Trigger: GACCGGGTTCGTGTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR GCA 90 bp ACGAACCCGGTCCTCATACTAACCCACGGGTTACAAACTCGGTTGTaGTGTAGATTTGTAGAAAATCGTGTTGTGAAAGAATGGCACTGG +
Preference number: 1 (lower is better)
Translates to: TNPVLILTHGLQTRL*CRFVENRVVKEWHW
Trigger: CCAGTGCCATTCTTTCACAACACGATTTTCTACAAATCTACAGCACAACCGAGTTTGTAACCCGTGGGTTAGTATGAGGACCGGGTTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR GCA 90 bp CCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCGGCTGTCGAGAGCTaGAGGGCCCGGGCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: PSSPKHRALDGGDMAQGWAAVES*RARALL
Trigger: GAGCAGGGCCCGGGCCCTGCAGCTCTCGACAGCCGC...CCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR-3UTR CCA 90 bp CCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGAGTGGCCTGGGGCGTaGGGTTTCAGGGAGCGGCTG +
Preference number: 2 (lower is better)
Translates to: PSSPKHRALDGGDMAQGWEWPGA*GFRERL
Trigger: CAGCCGCTCCCTGAAACCCCACGCCCCAGGCCACTC...CCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR CAA 90 bp ACAAGGACGCACGTCCTAGCGCCAGGCTCCCTGGGCTCTGCAGCGTaGTCTGCCCCAGCACAGGGCCAGGCATCTGGCTGGCTGCGTGGC +
Preference number: 2 (lower is better)
Translates to: TRTHVLAPGSLGSAA*SAPAQGQASGWLRG
Trigger: GCCACGCAGCCAGCCAGATGCCTGGCCCTGTGCTGGGGCAGACAACGCTGCAGAGCCCAGGGAGCCTGGCGCTAGGACGTGCGTCCTTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR TCA 90 bp CCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCCTCCTCTGTCCACAGTaGGGCCCAGAGGCGCAGAGC +
Preference number: 2 (lower is better)
Translates to: PQAPGTRWRGHGPGMGCSLLCPQ*GPEAQS
Trigger: GCTCTGCGCCTCTGGGCCTCACTGTGGACAGAGGAG...GCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR CCA 90 bp CAGCTGGAGGCTCCTGGGGCGGGCCTGACTCCTCTGTCCACAGTGAGGCCCAGAGCACCGGGCACTCGATaGAGGGGACATGGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: QLEAPGAGLTPLSTVRPRAPGTR*RGHGPG
Trigger: CCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGC...TCTGGGCCTCACTGTGGACAGAGGAGTCAGGCCCGCCCCAGGAGCCTCCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR GCA 90 bp AGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGCCTGCGGGCAGCGTGCATaGGAGGGTGCAGGCATGCGA +
Preference number: 2 (lower is better)
Translates to: SAASRFPGTDCGSLPVPACGQRA*EGAGMR
Trigger: TCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCA...GGCAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR GCA 90 bp CGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGACGACATTGGGCGTGGCACGTGGCATaGGGGCAGCGTGCATGCGAG +
Preference number: 2 (lower is better)
Translates to: RGMRAACMRGCRHARRHWAWHVA*GQRACE
Trigger: CTCGCATGCACGCTGCCCGCATGCCACGTGCCACGC...CCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR CCA 90 bp GATCCCCGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGTGCAGCTGCAAGGGCTaGCAGAGGCCCCGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: DPRLWLHCPDGRLPEEAQCSCKG*QRPRCS
Trigger: GGAGCAGCGGGGCCTCTGCCAGCCCTTGCAGCTGCA...CTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR CCA 90 bp CTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTCGATGGAGGGGACATaGCCCAGGGATGGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: LLPQAPGTRWRGHGPGMGSMEGT*PRDGLQ
Trigger: CTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGA...GCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR CCA 90 bp CTGCAGCTGCAAGGGCTGGCAGAGGCCCCGCTGCTCCGGACGGTCTATGCCTCCCTACAGCGTGGCACGTaGCATGCGGGCAGCGTGCAT +
Preference number: 2 (lower is better)
Translates to: LQLQGLAEAPLLRTVYASLQRGT*HAGSVH
Trigger: ATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAG...GGAGGCATAGACCGTCCGGAGCAGCGGGGCCTCTGCCAGCCCTTGCAGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR-3UTR CCA 90 bp CAGCTCTGCCATGCTGAACTTGGGTGCCAGTACCACACCCTGCCCTGGGCATGCCAGCCGGCACGCAGGTaGGGCACGTCCCCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: QLCHAELGCQYHTLPWACQPARR*GTSPGR
Trigger: CCTCCCTGGGGACGTGCCCCACCTGCGTGCCGGCTG...GCATGCCCAGGGCAGGGTGTGGTACTGGCACCCAAGTTCAGCATGGCAGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR CCA 90 bp CTGCAGCTGCAAGGGCTGGCAGAGGCCCCGCTGCTCCGGACGGTCTATGCCTCCCAGTCGCATGGCTACTaGCAGGTGGTCCGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: LQLQGLAEAPLLRTVYASQSHGY*QVVRQA
Trigger: GGCCTGACGGACCACCTGCCAGTAGCCATGCGACTG...GGAGGCATAGACCGTCCGGAGCAGCGGGGCCTCTGCCAGCCCTTGCAGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR-3UTR TCA 90 bp CGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGAGTTTGGCCTTGGGTaGGGCCCGAGCAAGGGGTCT +
Preference number: 2 (lower is better)
Translates to: RALDGGDMAQGWAAAARAEFGLG*GPSKGS
Trigger: AGACCCCTTGCTCGGGCCTCACCCAAGGCCAAACTC...AGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR GCA 90 bp CCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCGAGGGTGCAGGCATaGGAGACGACATTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: PSSPKHRALDGGDMAQGWARVQA*ETTLAA
Trigger: TGCTGCCAATGTCGTCTCGCATGCCTGCACCCTCGC...CCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR GCA 90 bp GATCCCCGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGTGCGGGCAGCGTGCATaGGAGGGTGCAGGCATGCGA +
Preference number: 2 (lower is better)
Translates to: DPRLWLHCPDGRLPEEAQCGQRA*EGAGMR
Trigger: TCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCA...CTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR GCA 90 bp AGCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTTGGCAGAGGCCCCGCTaGTCCGGACGGTCTATGCCT +
Preference number: 2 (lower is better)
Translates to: SSAASRFPGTDCGSLPVPWQRPR*SGRSMP
Trigger: AGGCATAGACCGTCCGGAGCAGCGGGGCCTCTGCCA...AGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR CAA 90 bp AGGCTCCCGGAGGAGGCCCAGGGTGCCAGAGCCTGCCAGACTCTGTaGTGCCTGAGCTGGGGAAGGGACCCTGTCTCGGGAAGAGCAAAG +
Preference number: 2 (lower is better)
Translates to: RLPEEAQGARACQTL*CLSWGRDPVSGRAK
Trigger: CTTTGCTCTTCCCGAGACAGGGTCCCTTCCCCAGCTCAGGCACAACAGAGTCTGGCAGGCTCTGGCACCCTGGGCCTCCTCCGGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CAA 90 bp GCCCCAGCACAGGGCCAGGCATCTGGCTGGCTGCGTGGCCCCCTCTaGGTCCCTCTTGCAGCTCAATGGGTGACAAGGCACAGCATCAGG +
Preference number: 2 (lower is better)
Translates to: APAQGQASGWLRGPL*VPLAAQWVTRHSIR
Trigger: CCTGATGCTGTGCCTTGTCACCCATTGAGCTGCAAGAGGGACCAAGAGGGGGCCACGCAGCCAGCCAGATGCCTGGCCCTGTGCTGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR GCA 90 bp CGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCGCGTGCATGCGAGGGTaGAGGCATGCGAGACGACAT +
Preference number: 2 (lower is better)
Translates to: RLWLHCPDGRLPEEAQGAACMRG*RHARRH
Trigger: ATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGC...GGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR CCA 90 bp AGCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTCTACAGCGTGGCACGTaGCATGCGGGCAGCGTGCAT +
Preference number: 2 (lower is better)
Translates to: SSAASRFPGTDCGSLPVPLQRGT*HAGSVH
Trigger: ATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAG...AGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR CCA 90 bp CGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGACGACATTGGATGGCTACTGGCAGGTaGTCCGTCAGGCCGGACAGC +
Preference number: 2 (lower is better)
Translates to: RGMRAACMRGCRHARRHWMATGR*SVRPDS
Trigger: GCTGTCCGGCCTGACGGACCACCTGCCAGTAGCCAT...CCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR-3UTR CCA 90 bp CTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCACACCATCAGTCGCATaGCTACTGGCAGGTGGTCCG +
Preference number: 2 (lower is better)
Translates to: LLPQAPGTRWRGHGPGMGTPSVA*LLAGGP
Trigger: CGGACCACCTGCCAGTAGCCATGCGACTGATGGTGT...GCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR-3UTR CCA 90 bp AGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGATTTGGAGTTTGGCCTTaGGTGAGGCCCGAGCAAGGG +
Preference number: 2 (lower is better)
Translates to: SVARGMRAACMRGCRHARFGVWP*VRPEQG
Trigger: CCCTTGCTCGGGCCTCACCCAAGGCCAAACTCCAAA...TCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR CCA 90 bp AGCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTTGCTCTCTCTTTGCATaGCCCTGGCTGCTGGGCCCT +
Preference number: 2 (lower is better)
Translates to: SSAASRFPGTDCGSLPVPCSLFA*PWLLGP
Trigger: AGGGCCCAGCAGCCAGGGCCATGCAAAGAGAGAGCA...AGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR-3UTR CCA 90 bp TGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCAGAGCCCGTGTTGTGAAAGAATaGCACTGGTTAGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: WLHCPDGRLPEEAQGARARVVKE*HWLGSW
Trigger: CCAGCTGCCTAACCAGTGCCATTCTTTCACAACACG...GGCTCTGGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR CCA 90 bp CCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGAGGGGAGAAACAGCCTaGTCAGATTCCAAGGGCATC +
Preference number: 2 (lower is better)
Translates to: PSSPKHRALDGGDMAQGWRGETA*SDSKGI
Trigger: GATGCCCTTGGAATCTGACCAGGCTGTTTCTCCCCT...CCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR-3UTR CCA 90 bp CGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGTGAAAGAATGGCACTaGTTAGGCAGCTGGAGGCTC +
Preference number: 2 (lower is better)
Translates to: RALDGGDMAQGWAAAARAVKEWH*LGSWRL
Trigger: GAGCCTCCAGCTGCCTAACCAGTGCCATTCTTTCAC...AGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR GCA 90 bp GCAGCTCAATGGGTGACAAGGCACAGCATCAGGGCACCAGCACCAGGAGGGGCTGCTGTTGGCCAGCTCTaGCATGCTGAACTTGGGTGC +
Preference number: 2 (lower is better)
Translates to: AAQWVTRHSIRAPAPGGAAVGQL*HAELGC
Trigger: GCACCCAAGTTCAGCATGGCAGAGCTGGCCAACAGC...AGCCCCTCCTGGTGCTGGTGCCCTGATGCTGTGCCTTGTCACCCATTGAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR GCA 90 bp AGAGGGGAGAAACAGCCTGGTCAGATTCCAAGGGCATCTTGCAGGGAGCGGCCTGCCCTGCTCTCTCTTTaGATGGCCCTGGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: RGEKQPGQIPRASCRERPALLSL*MALAAG
Trigger: CCCAGCAGCCAGGGCCATGCAAAGAGAGAGCAGGGC...AGGCCGCTCCCTGCAAGATGCCCTTGGAATCTGACCAGGCTGTTTCTCCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR-3UTR TCA 90 bp GCTGCTTCTGGAAGTTGGGGGCCTCCACATCATGAATCCCAGTCAAGGCTCACACAGGTTCCCGGGCACTaGCTGTGGCTCCCTCCCTGT +
Preference number: 2 (lower is better)
Translates to: AASGSWGPPHHESQSRLTQVPGH*LWLPPC
Trigger: ACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTG...TGTGAGCCTTGACTGGGATTCATGATGTGGAGGCCCCCAACTTCCAGAAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR GCA 90 bp AGGGTGCAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGGCAGCCCTCGGACCCTaGAGGAGCCGGCCCACACTG +
Preference number: 2 (lower is better)
Translates to: RVQACETTLAADKNKEPWAALGP*RSRPTL
Trigger: CAGTGTGGGCCGGCTCCTGCAGGGTCCGAGGGCTGC...CCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR GCA 90 bp ATCATTGTAAGAGTGGCCTGGGGCGTGGGGTTTCAGGGAGCGGCTGTCGAGAGCGCACAGCCCCTCCTCTaGATGCAGCATGTAGTCGAT +
Preference number: 2 (lower is better)
Translates to: IIVRVAWGVGFQGAAVESAQPLL*MQHVVD
Trigger: ATCGACTACATGCTGCATGCAGAGGAGGGGCTGTGC...GCTCTCGACAGCCGCTCCCTGAAACCCCACGCCCCAGGCCACTCTTACAATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR-3UTR CCA 90 bp CGAACTTTGAAACAGACAAAACCTTCGCTGCATGACAGGAGCAGCCCTGGAGTCGCTCCACTGCCCAGATaGGAGGCTCCCGGAGGAGGC +
Preference number: 2 (lower is better)
Translates to: RTLKQTKPSLHDRSSPGVAPLPR*EAPGGG
Trigger: GCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGC...GACTCCAGGGCTGCTCCTGTCATGCAGCGAAGGTTTTGTCTGTTTCAAAGTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CAA 90 bp GGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTaGGGTGAGGCCCGAGCAAGGGGTCTGTGGCTACAGCGTGGCACG +
Preference number: 2 (lower is better)
Translates to: GSASLAGSDCVWSLA*GEARARGLWLQRGT
Trigger: CGTGCCACGCTGTAGCCACAGACCCCTTGCTCGGGCCTCACCCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR CAA 90 bp ATGAACATTTCCTTCCTCAGTGGCCCCCGCGCCTTGTGGCTTCCTTaGAGACTGGGCCTAGGGCAGGAACAGAGTCTTGGTATGGGCCTC +
Preference number: 2 (lower is better)
Translates to: MNISFLSGPRALWLP*RLGLGQEQSLGMGL
Trigger: GAGGCCCATACCAAGACTCTGTTCCTGCCCTAGGCCCAGTCTCAAAGGAAGCCACAAGGCGCGGGGGCCACTGAGGAAGGAAATGTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR TCA 90 bp GTGCAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACGCAGGTTCCCGGGCACTaGCTGTGGCTCCCTCCCTGT +
Preference number: 2 (lower is better)
Translates to: VQACETTLAADKNKEPWTQVPGH*LWLPPC
Trigger: ACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTG...CGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR TCA 90 bp GCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTTGGCTCCTCTGTCCACAGTaGGGCCCAGAGGCGCAGAGC +
Preference number: 2 (lower is better)
Translates to: AQEVLLWLVLIVFGVWPWLLCPQ*GPEAQS
Trigger: GCTCTGCGCCTCTGGGCCTCACTGTGGACAGAGGAG...CCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR GCA 90 bp CGAACTTTGAAACAGACAAAACCTTCGCTGCATGACAGGAGCAGCCCTGGAGTCCTTGCTGCCCCAGCTTaGGCACTGGTGAGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: RTLKQTKPSLHDRSSPGVLAAPA*ALVRAR
Trigger: CCTGGCCCTCACCAGTGCGCAAGCTGGGGCAGCAAG...GACTCCAGGGCTGCTCCTGTCATGCAGCGAAGGTTTTGTCTGTTTCAAAGTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CAA 90 bp TGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTaGGCCTTGGGTGAGGCCCGAGCAAGGGGTCTGTGGCTACAGCGT +
Preference number: 2 (lower is better)
Translates to: CPGSASLAGSDCVWS*ALGEARARGLWLQR
Trigger: ACGCTGTAGCCACAGACCCCTTGCTCGGGCCTCACCCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR TCA 90 bp CAGCTCTGCCATGCTGAACTTGGGTGCCAGTACCACACCCTGCCCTGGGCATGCAAATGTAATTGCCCTTaGATGCGAGACCCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: QLCHAELGCQYHTLPWACKCNCP*MRDPGK
Trigger: CTTCCCAGGGTCTCGCATTCAAGGGCAATTACATTT...GCATGCCCAGGGCAGGGTGTGGTACTGGCACCCAAGTTCAGCATGGCAGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR CCA 90 bp CCTGTCCCTGCCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCAAAAATAAAGAACCCTaGACGAAGCTTAAGAGGAGA +
Preference number: 2 (lower is better)
Translates to: PVPALLPQAPGTRWRGHGKNKEP*TKLKRR
Trigger: TCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTT...GCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGGCAGGGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR CCA 90 bp AGAGCTGGTGGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTACCTCCTGGGGTGAGTaGGAGAGGGGAGAAACAGCC +
Preference number: 2 (lower is better)
Translates to: RAGGRAQEVLLWLVLIVFTSWGE*ERGETA
Trigger: GGCTGTTTCTCCCCTCTCCCACTCACCCCAGGAGGT...AAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCACCAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR CAA 90 bp CATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGACGACATaGGCAGCAGACAAAAATAAAGAACCCTGGACGAAGCTTAAGAGG +
Preference number: 2 (lower is better)
Translates to: HAGSVHARVQACETT*AADKNKEPWTKLKR
Trigger: CCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR CCA 90 bp CGAACTTTGAAACAGACAAAACCTTCGCTGCATGACAGGAGCAGCCCTGGAGTCTTGAATGCGAGACCCTaGGAAGAGCCCTGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: RTLKQTKPSLHDRSSPGVLNARP*EEPWAG
Trigger: GCCAGCCCAGGGCTCTTCCCAGGGTCTCGCATTCAA...GACTCCAGGGCTGCTCCTGTCATGCAGCGAAGGTTTTGTCTGTTTCAAAGTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR CCA 90 bp AGCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTAAAAATAAAGAACCCTaGACGAAGCTTAAGAGGAGA +
Preference number: 2 (lower is better)
Translates to: SSAASRFPGTDCGSLPVPKNKEP*TKLKRR
Trigger: TCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTT...AGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR CCA 90 bp ATACTAACCCACGGGTTACAAACTCGGTTGTGCTGTAGATTTGTAGAAAATCGTGCAGCTGGAGGCTCCTaGGGCGGGCCTGACTCCTCT +
Preference number: 2 (lower is better)
Translates to: ILTHGLQTRLCCRFVENRAAGGS*GGPDSS
Trigger: AGAGGAGTCAGGCCCGCCCCAGGAGCCTCCAGCTGC...ACGATTTTCTACAAATCTACAGCACAACCGAGTTTGTAACCCGTGGGTTAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR CCA 90 bp GCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTTGGGTGAAAGAATGGCACTaGTTAGGCAGCTGGAGGCTC +
Preference number: 2 (lower is better)
Translates to: AQEVLLWLVLIVFGVWPWVKEWH*LGSWRL
Trigger: GAGCCTCCAGCTGCCTAACCAGTGCCATTCTTTCAC...CCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR TCA 90 bp GCTGCTTCTGGAAGTTGGGGGCCTCCACATCATGAATCCCAGTCAAGGCTCACATTCTTTGGCTGGTTCTaGTTGTGTTTGGAGTTTGGC +
Preference number: 2 (lower is better)
Translates to: AASGSWGPPHHESQSRLTFFGWF*LCLEFG
Trigger: GCCAAACTCCAAACACAATCAGAACCAGCCAAAGAA...TGTGAGCCTTGACTGGGATTCATGATGTGGAGGCCCCCAACTTCCAGAAGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR CCA 90 bp GCAGACAAAAATAAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACGACATGGCCCAGGGATaGGCTGCAGCTGCAAGGGCT +
Preference number: 2 (lower is better)
Translates to: ADKNKEPWTKLKRRYREYDMAQG*AAAARA
Trigger: AGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTC...GTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR CCA 90 bp AGGGTGCAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGCGTGTTGTGAAAGAATaGCACTGGTTAGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: RVQACETTLAADKNKEPWRVVKE*HWLGSW
Trigger: CCAGCTGCCTAACCAGTGCCATTCTTTCACAACACG...CCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR CCA 90 bp AAAAATAAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACACGAACTCGATGGAGGGGACATaGCCCAGGGATGGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: KNKEPWTKLKRRYREYTNSMEGT*PRDGLQ
Trigger: CTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGA...GTTCGTGTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR CCA 90 bp AAAAATAAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACACGAACATTGTAAGAGTGGCCTaGGGCGTGGGGTTTCAGGGA +
Preference number: 2 (lower is better)
Translates to: KNKEPWTKLKRRYREYTNIVRVA*GVGFQG
Trigger: TCCCTGAAACCCCACGCCCCAGGCCACTCTTACAAT...GTTCGTGTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR CAA 90 bp TACACGAACCCGGTCCTCATACTAACCCACGGGTTACAAACTCGGTaGTGCTGTAGATTTGTAGAAAATCGTGTTGTGAAAGAATGGCAC +
Preference number: 2 (lower is better)
Translates to: YTNPVLILTHGLQTR*CCRFVENRVVKEWH
Trigger: GTGCCATTCTTTCACAACACGATTTTCTACAAATCTACAGCACAACCGAGTTTGTAACCCGTGGGTTAGTATGAGGACCGGGTTCGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR GCA 72 bp CCTGGGCTGGCTGGTAGAGATGCAGCCCTCGGACCCTaGAGGAGCCGGCCCACACTGGAGGCGGGAGAGCTG +
Preference number: 3 (lower is better)
Translates to: PGLAGRDAALGP*RSRPTLEAGEL
Trigger: CAGCTCTCCCGCCTCCAGTGTGGGCCGGCTCCTGCAGGGTCCGAGGGCTGCATCTCTACCAGCCAGCCCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR GCA 72 bp AGGGAGCGGCTGTCGAGAGCTGCAGGGCCCGGGCCCTaGTCTCTCTTTGCATGGCCCTGGCTGCTGGGCCCT +
Preference number: 3 (lower is better)
Translates to: RERLSRAAGPGP*SLFAWPWLLGP
Trigger: AGGGCCCAGCAGCCAGGGCCATGCAAAGAGAGAGCAGGGCCCGGGCCCTGCAGCTCTCGACAGCCGCTCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR CCA 72 bp GTCCCTGCCCTCCTCCCCCAAGCACCGGGCACTCGATaGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: VPALLPQAPGTR*RGHGPGMGCSC
Trigger: GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGGCAGGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR CCA 72 bp AGCCCAGCAGGATGCTCGCCCTCAGCAGCCCCTTCCTaGCTCTGGACTCTGGAGGGGCAGGGCTTGGGCCCG +
Preference number: 3 (lower is better)
Translates to: SPAGCSPSAAPS*LWTLEGQGLGP
Trigger: CGGGCCCAAGCCCTGCCCCTCCAGAGTCCAGAGCCAGGAAGGGGCTGCTGAGGGCGAGCATCCTGCTGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR GCA 72 bp CCCAGCTTGCGCACTGGTGAGGGCCAGGCTGCTCTCTaGACCTTGGCTTCCTGCCTCCTAGGCCGGGGTCCC +
Preference number: 3 (lower is better)
Translates to: PSLRTGEGQAAL*TLASCLLGRGP
Trigger: GGGACCCCGGCCTAGGAGGCAGGAAGCCAAGGTGCAGAGAGCAGCCTGGCCCTCACCAGTGCGCAAGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR GCA 72 bp TGGGGCGTGGGGTTTCAGGGAGCGGCTGTCGAGAGCTaGAGGGCCCGGGCCCTGCTCTCTCTTTGCATGGCC +
Preference number: 3 (lower is better)
Translates to: WGVGFQGAAVES*RARALLSLCMA
Trigger: GGCCATGCAAAGAGAGAGCAGGGCCCGGGCCCTGCAGCTCTCGACAGCCGCTCCCTGAAACCCCACGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR CCA 72 bp GCCCGAGCAAGGGGTCTGTGGCTACAGCGTGGCACGTaGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCA +
Preference number: 3 (lower is better)
Translates to: ARARGLWLQRGT*HAGSVHARVQA
Trigger: TGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAGCCACAGACCCCTTGCTCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR GCA 72 bp GCTACAGCGTGGCACGTGGCATGCGGGCAGCGTGCATaGGAGGGTGCAGGCATGCGAGACGACATTGGCAGC +
Preference number: 3 (lower is better)
Translates to: ATAWHVACGQRA*EGAGMRDDIGS
Trigger: GCTGCCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR GCA 72 bp AGCAAGGGGTCTGTGGCTACAGCGTGGCACGTGGCATaGGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGA +
Preference number: 3 (lower is better)
Translates to: SKGSVATAWHVA*GQRACEGAGMR
Trigger: TCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAGCCACAGACCCCTTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR CCA 72 bp AGTTTGGCCTTGGGTGAGGCCCGAGCAAGGGGTCTGTaGCTACAGCGTGGCACGTGGCATGCGGGCAGCGTG +
Preference number: 3 (lower is better)
Translates to: SLALGEARARGL*LQRGTWHAGSV
Trigger: CACGCTGCCCGCATGCCACGTGCCACGCTGTAGCCACAGACCCCTTGCTCGGGCCTCACCCAAGGCCAAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR CCA 72 bp CTTCTCGGATCCCCGTTTATGGCTCCACTGCCCAGATaGGAGGCTCCCGGAGGAGGCCCAGGGTGCCAGAGC +
Preference number: 3 (lower is better)
Translates to: LLGSPFMAPLPR*EAPGGGPGCQS
Trigger: GCTCTGGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATCCGAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR CAA 90 bp GCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGGTTTGGAGTTTGGCCTaGGGTGAGGCCCGAGCAAGG +
Preference number: 3 (lower is better)
Translates to: AAQLPGSRALTVAPSLSLVWSLA*GEARAR
Trigger: CCTTGCTCGGGCCTCACCCAAGGCCAAACTCCAAAC...CAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR TCA 72 bp GCTTGGGCCCGGGCAGACGGTGCTTCCCAGGCCAGGTaGGTTCAGACAGGCCAGTGTCACAAGGACGCACGT +
Preference number: 3 (lower is better)
Translates to: AWARADGASQAR*VQTGQCHKDAR
Trigger: ACGTGCGTCCTTGTGACACTGGCCTGTCTGAACTCACCTGGCCTGGGAAGCACCGTCTGCCCGGGCCCAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR GCA 72 bp ACTCACGGCCTTCCAGTCTGGGCACAGCCCCTCCTCTaGATGCAGCATGTAGTCGATGCGCCGGCCGTTGCC +
Preference number: 3 (lower is better)
Translates to: THGLPVWAQPLL*MQHVVDAPAVA
Trigger: GGCAACGGCCGGCGCATCGACTACATGCTGCATGCAGAGGAGGGGCTGTGCCCAGACTGGAAGGCCGTGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR TCA 72 bp CCCAGGGTGCCAGAGCCTGCCAGACTCTGTTGTGCCTaGGCTGGGGAAGGGACCCTGTCTCGGGAAGAGCAA +
Preference number: 3 (lower is better)
Translates to: PRVPEPARLCCA*AGEGTLSREEQ
Trigger: TTGCTCTTCCCGAGACAGGGTCCCTTCCCCAGCTCAGGCACAACAGAGTCTGGCAGGCTCTGGCACCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CCA 72 bp CTCCTCCCCCGAAGACACCATCAGTCGCATGGCTACTaGCAGGTGGTCCGTCAGGCCGGACAGCTGGGTGAT +
Preference number: 3 (lower is better)
Translates to: LLPRRHHQSHGY*QVVRQAGQLGD
Trigger: ATCACCCAGCTGTCCGGCCTGACGGACCACCTGCCAGTAGCCATGCGACTGATGGTGTCTTCGGGGGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR-3UTR CAA 90 bp CGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGATTGTGTTTGGAGTTaGGCCTTGGGTGAGGCCCGA +
Preference number: 3 (lower is better)
Translates to: RALDGGDMAQGWAAAARADCVWS*ALGEAR
Trigger: TCGGGCCTCACCCAAGGCCAAACTCCAAACACAATC...AGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR TCA 72 bp CTAGGGCAGGAACAGAGTCTTGGTATGGGCCTCGGGTaGCCCGTGTGCCCACCCCTGCTAGGCCTTAGATGC +
Preference number: 3 (lower is better)
Translates to: LGQEQSLGMGLG*PVCPPLLGLRC
Trigger: GCATCTAAGGCCTAGCAGGGGTGGGCACACGGGTCACCCGAGGCCCATACCAAGACTCTGTTCCTGCCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR GCA 72 bp GTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTaGAGGCATGCGAGACGACATTGGCAGCAGACAAAA +
Preference number: 3 (lower is better)
Translates to: VARGMRAACMRG*RHARRHWQQTK
Trigger: TTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR GCA 72 bp GATACTCTCTTCTCGGATCCCCGTTTATGGCTCCACTaGCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGT +
Preference number: 3 (lower is better)
Translates to: DTLFSDPRLWLH*PDGRLPEEAQG
Trigger: ACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATCCGAGAAGAGAGTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CCA 72 bp CTGCGTGGCCCCCTCTTGGTCCCTCTTGCAGCTCAATaGGTGACAAGGCACAGCATCAGGGCACCAGCACCA +
Preference number: 3 (lower is better)
Translates to: LRGPLLVPLAAQ*VTRHSIRAPAP
Trigger: TGGTGCTGGTGCCCTGATGCTGTGCCTTGTCACCCATTGAGCTGCAAGAGGGACCAAGAGGGGGCCACGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR GCA 72 bp TCTGCCATGCTGAACTTGGGTGCCAGTACCACACCCTaGCCTGGGCATGCAGCAACTGTCAGCCTTGCTGCC +
Preference number: 3 (lower is better)
Translates to: SAMLNLGASTTP*PGHAATVSLAA
Trigger: GGCAGCAAGGCTGACAGTTGCTGCATGCCCAGGGCAGGGTGTGGTACTGGCACCCAAGTTCAGCATGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR GCA 72 bp CAAGCTGTTGGCCAGCTCTGCCATGCTGAACTTGGGTaGCAGTACCACACCCTGCCCTGGGCATGCAGCAAC +
Preference number: 3 (lower is better)
Translates to: QAVGQLCHAELG*QYHTLPWACSN
Trigger: GTTGCTGCATGCCCAGGGCAGGGTGTGGTACTGGCACCCAAGTTCAGCATGGCAGAGCTGGCCAACAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR GCA 72 bp GAGGCAGATCGGGGACCACAAGCTGTTGGCCAGCTCTaGCATGCTGAACTTGGGTGCCAGTACCACACCCTG +
Preference number: 3 (lower is better)
Translates to: EADRGPQAVGQL*HAELGCQYHTL
Trigger: CAGGGTGTGGTACTGGCACCCAAGTTCAGCATGGCAGAGCTGGCCAACAGCTTGTGGTCCCCGATCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR TCA 72 bp ACCAGCTGCTTCTGGAAGTTGGGGGCCTCCACATCATaGATCCCAGTCAAGGCTCACAGGCCAGCCCCTTGG +
Preference number: 3 (lower is better)
Translates to: TSCFWKLGASTS*IPVKAHRPAPW
Trigger: CCAAGGGGCTGGCCTGTGAGCCTTGACTGGGATTCATGATGTGGAGGCCCCCAACTTCCAGAAGCAGCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CCA 72 bp TCTGAGGGAGTGATGGGTATCATTGTAAGAGTGGCCTaGGGCGTGGGGTTTCAGGGAGCGGCTGTCGAGAGC +
Preference number: 3 (lower is better)
Translates to: SEGVMGIIVRVA*GVGFQGAAVES
Trigger: GCTCTCGACAGCCGCTCCCTGAAACCCCACGCCCCAGGCCACTCTTACAATGATACCCATCACTCCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR CCA 72 bp CCCGAAGACACCATCAGTCGCATGGCTACTGGCAGGTaGTCCGTCAGGCCGGACAGCTGGGTGATAAAACTG +
Preference number: 3 (lower is better)
Translates to: PEDTISRMATGR*SVRPDSWVIKL
Trigger: CAGTTTTATCACCCAGCTGTCCGGCCTGACGGACCACCTGCCAGTAGCCATGCGACTGATGGTGTCTTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR-3UTR CAA 90 bp CGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGACGACATTGGGGGTTACAAACTCGGTaGTGCTGTAGATTTGTAGAA +
Preference number: 3 (lower is better)
Translates to: RGMRAACMRGCRHARRHWGLQTR*CCRFVE
Trigger: TTCTACAAATCTACAGCACAACCGAGTTTGTAACCC...CCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR CCA 72 bp GTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTaGCCTTGGGTGAGGCCCGAGCAAGGGGTCTGTGGC +
Preference number: 3 (lower is better)
Translates to: VLLWLVLIVFGV*PWVRPEQGVCG
Trigger: GCCACAGACCCCTTGCTCGGGCCTCACCCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR CCA 72 bp ATGGCTACTGGCAGGTGGTCCGTCAGGCCGGACAGCTaGGTGATAAAACTGAATTCTTCCACCTCCTGGGGT +
Preference number: 3 (lower is better)
Translates to: MATGRWSVRPDS*VIKLNSSTSWG
Trigger: ACCCCAGGAGGTGGAAGAATTCAGTTTTATCACCCAGCTGTCCGGCCTGACGGACCACCTGCCAGTAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR GCA 72 bp TGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATaGGAGACGACATTGGCAGCAGACAAAAATAAAGAA +
Preference number: 3 (lower is better)
Translates to: WHAGSVHARVQA*ETTLAADKNKE
Trigger: TTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR CCA 72 bp GCGTGCATGCGAGGGTGCAGGCATGCGAGACGACATTaGCAGCAGACAAAAATAAAGAACCCTGGACGAAGC +
Preference number: 3 (lower is better)
Translates to: ACMRGCRHARRH*QQTKIKNPGRS
Trigger: GCTTCGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR CCA 72 bp CCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTaGAGTTTGGCCTTGGGTGAGGCCCGAGCAAGGGGT +
Preference number: 3 (lower is better)
Translates to: PGSASLAGSDCV*SLALGEARARG
Trigger: ACCCCTTGCTCGGGCCTCACCCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR CCA 72 bp GCTTGTGTGAGCAGAGTACCAGCTGCTTCTGGAAGTTaGGGGCCTCCACATCATGAATCCCAGTCAAGGCTC +
Preference number: 3 (lower is better)
Translates to: ACVSRVPAASGS*GPPHHESQSRL
Trigger: GAGCCTTGACTGGGATTCATGATGTGGAGGCCCCCAACTTCCAGAAGCAGCTGGTACTCTGCTCACACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR CAA 90 bp GCAGCTCAATGGGTGACAAGGCACAGCATCAGGGCACCAGCACCAGGAGGGGCTGTTGAGTCTCGAACTTaGAAACAGACAAAACCTTCG +
Preference number: 3 (lower is better)
Translates to: AAQWVTRHSIRAPAPGGAVESRT*KQTKPS
Trigger: CGAAGGTTTTGTCTGTTTCAAAGTTCGAGACTCAAC...AGCCCCTCCTGGTGCTGGTGCCCTGATGCTGTGCCTTGTCACCCATTGAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR CAA 90 bp GCTGCTTCTGGAAGTTGGGGGCCTCCACATCATGAATCCCAGTCAAGGCTCACAGGAGGTCAGCGGGGATaGTCAAAAACAGTCCCTCAA +
Preference number: 3 (lower is better)
Translates to: AASGSWGPPHHESQSRLTGGQRG*SKTVPQ
Trigger: TTGAGGGACTGTTTTTGACAATCCCCGCTGACCTCC...TGTGAGCCTTGACTGGGATTCATGATGTGGAGGCCCCCAACTTCCAGAAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR TCA 72 bp GGGAAGGGACCCTGTCTCGGGAAGAGCAAAGTTCTATaGGTGACTTACAGACCCTGTGAAGTGAGGGTTGGT +
Preference number: 3 (lower is better)
Translates to: GKGPCLGKSKVL*VTYRPCEVRVG
Trigger: ACCAACCCTCACTTCACAGGGTCTGTAAGTCACTCATAGAACTTTGCTCTTCCCGAGACAGGGTCCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR-3UTR CAA 90 bp CGAACTTTGAAACAGACAAAACCTTCGCTGCATGACAGGAGCAGCCCTGGAGTCCCAGGAAGTGCTTCTTaGGCTGGTTCTGATTGTGTT +
Preference number: 3 (lower is better)
Translates to: RTLKQTKPSLHDRSSPGVPGSAS*AGSDCV
Trigger: AACACAATCAGAACCAGCCAAAGAAGCACTTCCTGG...GACTCCAGGGCTGCTCCTGTCATGCAGCGAAGGTTTTGTCTGTTTCAAAGTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CCA 72 bp GAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTaGACGAAGCTTAAGAGGAGATACAGAGAGTACACG +
Preference number: 3 (lower is better)
Translates to: ETTLAADKNKEP*TKLKRRYREYT
Trigger: CGTGTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR TCA 72 bp TGTCAAAAACAGTCCCTCAAGTTGAGTCTCGAACTTTaGAACAGACAAAACCTTCGCTGCATGACAGGAGCA +
Preference number: 3 (lower is better)
Translates to: CQKQSLKLSLEL*NRQNLRCMTGA
Trigger: TGCTCCTGTCATGCAGCGAAGGTTTTGTCTGTTTCAAAGTTCGAGACTCAACTTGAGGGACTGTTTTTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR GCA 72 bp GTCCTCATACTAACCCACGGGTTACAAACTCGGTTGTaGTGTAGATTTGTAGAAAATCGTGTTGTGAAAGAA +
Preference number: 3 (lower is better)
Translates to: VLILTHGLQTRL*CRFVENRVVKE
Trigger: TTCTTTCACAACACGATTTTCTACAAATCTACAGCACAACCGAGTTTGTAACCCGTGGGTTAGTATGAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR-3UTR CAA 90 bp AAAAATAAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACACGAACGGGTTACAAACTCGGTaGTGCTGTAGATTTGTAGAA +
Preference number: 3 (lower is better)
Translates to: KNKEPWTKLKRRYREYTNGLQTR*CCRFVE
Trigger: TTCTACAAATCTACAGCACAACCGAGTTTGTAACCC...GTTCGTGTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR TCA 90 bp CAGCTGGAGGCTCCTGGGGCGGGCCTGACTCCTCTGTCCACAGTGAGGCCCAGAGTCACCGCAGACCTCTaGCGGCGGGCGGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: QLEAPGAGLTPLSTVRPRVTADL*RRAGGR
Trigger: CCGCCCTCCCGCCCGCCGTCAGAGGTCTGCGGTGAC...TCTGGGCCTCACTGTGGACAGAGGAGTCAGGCCCGCCCCAGGAGCCTCCAGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp TGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCAGAGCCCTGGTGTGGGGGCCCTaGCCGGGCCTCAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: WLHCPDGRLPEEAQGARALVWGP*PGLNCS
Trigger: AGAGCAGTTGAGGCCCGGGCAGGGCCCCCACACCAG...GGCTCTGGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp CAGCTGGAGGCTCCTGGGGCGGGCCTGACTCCTCTGTCCACAGTGAGGCCCAGAGACTCCCACGCCTGCTaGCCCGGGAGGGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: QLEAPGAGLTPLSTVRPRDSHAC*PGRGCL
Trigger: CAGGCACCCCCTCCCGGGGCAGCAGGCGTGGGAGTC...TCTGGGCCTCACTGTGGACAGAGGAGTCAGGCCCGCCCCAGGAGCCTCCAGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCCTGACTCCCACGCCTaGTGCCCCGGGAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWPDSHA*CPGRGC
Trigger: GCACCCCCTCCCGGGGCAGCAGGCGTGGGAGTCAGG...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGGCGGCTGTCGAGAGCTaGAGGGCCCGGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWAAVES*RARALL
Trigger: GAGCAGGGCCCGGGCCCTGCAGCTCTCGACAGCCGC...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR CCA 90 bp TGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCAGAGCCACCATCGCAGCTCACTaGGCGCCGCAGCCGGCCCTA +
Preference number: 4 (lower is better)
Translates to: WLHCPDGRLPEEAQGARATIAAH*APQPAL
Trigger: TAGGGCCGGCTGCGGCGCCCAGTGAGCTGCGATGGT...GGCTCTGGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp AGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGAGGGCGTCTGGCCCCTTaGGCCCCCGCCAGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: SVARGMRAACMRGCRHARGRLAP*APASSV
Trigger: AACGGAGCTGGCGGGGGCCCAAGGGGCCAGACGCCC...TCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp TGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCAGAGCCGCAGCACGGGTCGTCTaGCCGCTGGCGCTTCTCGTA +
Preference number: 4 (lower is better)
Translates to: WLHCPDGRLPEEAQGARAAARVV*PLALLV
Trigger: TACGAGAAGCGCCAGCGGGCAGACGACCCGTGCTGC...GGCTCTGGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp CGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCGCAGCCCTCGGACCCTaGAGGAGCCGGCCCACACTG +
Preference number: 4 (lower is better)
Translates to: RLWLHCPDGRLPEEAQGAAALGP*RSRPTL
Trigger: CAGTGTGGGCCGGCTCCTGCAGGGTCCGAGGGCTGC...GGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGCAGCCCTCGGACCCTaGAGGAGCCGGCCCACACTG +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGAALGP*RSRPTL
Trigger: CAGTGTGGGCCGGCTCCTGCAGGGTCCGAGGGCTGC...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp TGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCAGAGCCTGGAAGGGCCTGGCCTaGACACAAGGCCCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: WLHCPDGRLPEEAQGARAWKGLA*TQGPGV
Trigger: GACTCCCGGGCCTTGTGTGCAGGCCAGGCCCTTCCA...GGCTCTGGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp CCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCAGGGCCCGGGCCCTaGTCTCTCTTTGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: PSSPKHRALDGGDMAQGWAGPGP*SLFAWP
Trigger: GGGCCATGCAAAGAGAGAGCAGGGCCCGGGCCCTGC...CCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR CCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGGTCGTCAGCTTCAGGTaGCCGGCCGCCCTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWVVSFR*PAALLA
Trigger: GGCGAGGAGGGCGGCCGGCCACCTGAAGCTGACGAC...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGCTCCGTTCCTGGCCTaGCCCCCAGGCACAGGGTCG +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGAPFLA*PPGTGS
Trigger: CGACCCTGTGCCTGGGGGCCAGGCCAGGAACGGAGC...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCCGCCAGCTCCGTTCCTaGCCTGGCCCCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGRQLRS*PGPQAQ
Trigger: CTGTGCCTGGGGGCCAGGCCAGGAACGGAGCTGGCG...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGGGCGTCTGGCCCCTTaGGCCCCCGCCAGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQGRLAP*APASSV
Trigger: AACGGAGCTGGCGGGGGCCCAAGGGGCCAGACGCCC...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGGCTCCCCGCTGGCACTaGTGTCTGGCCCAGCTCGCC +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWAPRWH*CLAQLA
Trigger: GGCGAGCTGGGCCAGACACCAGTGCCAGCGGGGAGC...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp CTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCGCTGCCCACACCGGATaGCGCTGTCCTCTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: LLPQAPGTRWRGHGPGMGAAHTG*RCPLAG
Trigger: CCCCGCAAGAGGACAGCGCCATCCGGTGTGGGCAGC...GCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp AGCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTCAGCCGGCACGCAGGTaGGGCACGTCCCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SSAASRFPGTDCGSLPVPQPARR*GTSPGR
Trigger: CCTCCCTGGGGACGTGCCCCACCTGCGTGCCGGCTG...AGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCAGGCAAAGCCGGCCCTaGGCCAGGCTGGGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: LLPQAPGTRWRGHGPGMGRQSRP*ARLGVG
Trigger: CCCTACACCCAGCCTGGCCCAGGGCCGGCTTTGCCT...GCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CTACAGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCTGGAGGGGCAGGGCTTaGGCCCGGGCAGACGGTGCT +
Preference number: 4 (lower is better)
Translates to: LQRGTWHAGSVHARVQACWRGRA*ARADGA
Trigger: AGCACCGTCTGCCCGGGCCCAAGCCCTGCCCCTCCA...GCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCCCTGGCTCTGGACTCTaGAGGGGCAGGGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LLPQAPGTRWRGHGPGMGPGSGL*RGRAWA
Trigger: GGCCCAAGCCCTGCCCCTCCAGAGTCCAGAGCCAGG...GCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CTGCAGCTGCAAGGGCTGGCAGAGGCCCCGCTGCTCCGGACGGTCTATGCCTCCGAGTGGCCTGGGGCGTaGGGTTTCAGGGAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LQLQGLAEAPLLRTVYASEWPGA*GFRERL
Trigger: CAGCCGCTCCCTGAAACCCCACGCCCCAGGCCACTC...GGAGGCATAGACCGTCCGGAGCAGCGGGGCCTCTGCCAGCCCTTGCAGCTGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCAGGTTCCCGGGCACTaGCTGTGGCTCCCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PVPALLPQAPGTRWRGHGQVPGH*LWLPPC
Trigger: ACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTG...GCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGGCAGGGACAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCAGCTTGCGCACTGGTaGGGGCCAGGCTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PVPALLPQAPGTRWRGHGQLAHW*GPGCSL
Trigger: CAGAGAGCAGCCTGGCCCTCACCAGTGCGCAAGCTG...GCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGGCAGGGACAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp AGCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTTCCCGGTCTTGGTGCTaGGGGAGGTGTGCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SSAASRFPGTDCGSLPVPSRSWC*GRCAGA
Trigger: GGCCCCCGCACACCTCCCTCAGCACCAAGACCGGGA...AGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGGTATGGGCCTCGGGTaGCCCGTGTGCCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQGMGLG*PVCPPL
Trigger: CAGGGGTGGGCACACGGGTCACCCGAGGCCCATACC...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp CTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCCACCTCGGTGGGCCATaGGGAGGCCTACTGCAGACC +
Preference number: 4 (lower is better)
Translates to: LLPQAPGTRWRGHGPGMGHLGGP*GGLLQT
Trigger: GGTCTGCAGTAGGCCTCCGCATGGCCCACCGAGGTG...GCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGGGCCGGCGGGCCGACTaGAGTGGGGACCAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: AAQLPGSRALTVAPSLSLGRRAD*SGDQKR
Trigger: TCTCTTCTGGTCCCCACTGCAGTCGGCCCGCCGGCC...CAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGCCTCGTCACCGGGGTaGCGCCCACCGTCACCCTTG +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAASSPG*RPPSPL
Trigger: CAAGGGTGACGGTGGGCGGCACCCCGGTGACGAGGC...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCCGGGGTGCCGCCTCCTaGGTGCAGCCGCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCRGAAS*VQPPSS
Trigger: TGAAGAAGGCGGCTGCACGCAGGAGGCGGCACCCCG...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGGGGTGCCGCCTCCTaGGTGCAGCCGCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWRGAAS*VQPPSS
Trigger: TGAAGAAGGCGGCTGCACGCAGGAGGCGGCACCCCG...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGAAGGCCTCGTCGGGGTaGCGCCTCCTGCGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQKASSG*RLLRAA
Trigger: GGCTGCACGCAGGAGGCGGCACCCCGACGAGGCCTT...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAAAGGCCTCGTCGGGGTaGCGCCTCCTGCGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAKASSG*RLLRAA
Trigger: GGCTGCACGCAGGAGGCGGCACCCCGACGAGGCCTT...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp CTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCCGATGCGCCGGCCGTTaGCCTTCAGCAGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LLPQAPGTRWRGHGPGMGRCAGR*PSAAPS
Trigger: GGAAGGAGCTGCTGAAGGGCAACGGCCGGCGCATCG...GCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp CCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCGGGCAGCGTGCATaGGAGGGTGCAGGCATGCGA +
Preference number: 4 (lower is better)
Translates to: PQAPGTRWRGHGPGMGCSCGQRA*EGAGMR
Trigger: TCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCA...GCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp AGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGAGGCCCGGGCAGACGGTaGTTCCCAGGCCAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: SVARGMRAACMRGCRHARGPGRR*FPGQVS
Trigger: ACTCACCTGGCCTGGGAAGCACCGTCTGCCCGGGCC...TCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GCACGTCCCCAGGGAGGGATTGGTCCCGAACCAGAGAGGTGTCCCGTGGGGGAGGGGAGGGGAGGAGCATaGAGCCCTGACTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: ARPQGGIGPEPERCPVGEGRGGA*SPDSHA
Trigger: GGCGTGGGAGTCAGGGCTGCATGCTCCTCCCCTCCC...CTCCCCCACGGGACACCTCTCTGGTTCGGGACCAATCCCTCCCTGGGGACGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCACGAGGGTGGGCGAGTTaGGGGCAGCTGGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLARGWAS*GQLEEG
Trigger: CCCCTCCTCCAGCTGCCCCCAACTCGCCCACCCTCG...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGACGACATTGGGTCGTCAGCTTCAGGTaGCCGGCCGCCCTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: RGMRAACMRGCRHARRHWVVSFR*PAALLA
Trigger: GGCGAGGAGGGCGGCCGGCCACCTGAAGCTGACGAC...CCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGCTCCGTTCCTGGCCTaGCCCCCAGGCACAGGGTCG +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAAPFLA*PPGTGS
Trigger: CGACCCTGTGCCTGGGGGCCAGGCCAGGAACGGAGC...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp GATCCCCGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGCGCCAGCTCCGTTCCTaGCCTGGCCCCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: DPRLWLHCPDGRLPEEAQRQLRS*PGPQAQ
Trigger: CTGTGCCTGGGGGCCAGGCCAGGAACGGAGCTGGCG...CTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGAGCTCCCCGCTGGCACTaGTGTCTGGCCCAGCTCGCC +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRAPRWH*CLAQLA
Trigger: GGCGAGCTGGGCCAGACACCAGTGCCAGCGGGGAGC...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp CGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGCTGCCCACACCGGATaGCGCTGTCCTCTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: RALDGGDMAQGWAAAARAAAHTG*RCPLAG
Trigger: CCCCGCAAGAGGACAGCGCCATCCGGTGTGGGCAGC...AGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp CAGCTGGAGGCTCCTGGGGCGGGCCTGACTCCTCTGTCCACAGTGAGGCCCAGACCAGCTCCTCGGGGTTaGCTGCGCTGGACGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QLEAPGAGLTPLSTVRPRPAPRG*LRWTRR
Trigger: CCTCCTCGTCCAGCGCAGCCAACCCCGAGGAGCTGG...TCTGGGCCTCACTGTGGACAGAGGAGTCAGGCCCGCCCCAGGAGCCTCCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp TGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCAGAGCCATGGCTACTGGCAGGTaGTCCGTCAGGCCGGACAGC +
Preference number: 4 (lower is better)
Translates to: WLHCPDGRLPEEAQGARAMATGR*SVRPDS
Trigger: GCTGTCCGGCCTGACGGACCACCTGCCAGTAGCCAT...GGCTCTGGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCTGCAGCTGCAAGGGCTaGCAGAGGCCCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RLWLHCPDGRLPEEAQGACSCKG*QRPRCS
Trigger: GGAGCAGCGGGGCCTCTGCCAGCCCTTGCAGCTGCA...GGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCGCACCGGGCACTCGATaGAGGGGACATGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RLWLHCPDGRLPEEAQGAAPGTR*RGHGPG
Trigger: CCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGC...GGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CTGTCGAGAGCTGCAGGGCCCGGGCCCTGCTCTCTCTTTGCATGGCCCTGGCTGGCACCGGGCACTCGATaGAGGGGACATGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSRAAGPGPCSLFAWPWLAPGTR*RGHGPG
Trigger: CCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGC...CAGCCAGGGCCATGCAAAGAGAGAGCAGGGCCCGGGCCCTGCAGCTCTCGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR CCA 90 bp AGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGAGCAGCTGGAGGCTCCTaGGGCGGGCCTGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: SVARGMRAACMRGCRHARAAGGS*GGPDSS
Trigger: AGAGGAGTCAGGCCCGCCCCAGGAGCCTCCAGCTGC...TCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp CGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGCTCCACTGCCCAGATaGGAGGCTCCCGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RALDGGDMAQGWAAAARAAPLPR*EAPGGG
Trigger: GCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGC...AGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GCACGTCCCCAGGGAGGGATTGGTCCCGAACCAGAGAGGTGTCCCGTGGGGGAGGGCCAGGCATCTGGCTaGCTGCGTGGCCCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: ARPQGGIGPEPERCPVGEGQASG*LRGPLL
Trigger: CAAGAGGGGGCCACGCAGCCAGCCAGATGCCTGGCC...CTCCCCCACGGGACACCTCTCTGGTTCGGGACCAATCCCTCCCTGGGGACGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCGCCCCTTCCTGGCTCTaGACTCTGGAGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RLWLHCPDGRLPEEAQGAAPSWL*TLEGQG
Trigger: GCCCTGCCCCTCCAGAGTCCAGAGCCAGGAAGGGGC...GGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GCGGCTGTCGAGAGCTGCAGGGCCCGGGCCCTGCTCTCTCTTTGCATGGCCCTGCTGCAGTCAGAGGGATaGGGCCTGGAGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: AAVESCRARALLSLCMALLQSEG*GLEDLG
Trigger: CCCCAGGTCCTCCAGGCCCCATCCCTCTGACTGCAG...CAGGGCCATGCAAAGAGAGAGCAGGGCCCGGGCCCTGCAGCTCTCGACAGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR CCA 90 bp CCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCGGGGCTGGGGTGGGCTaGGACCTTCCTGCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: PQAPGTRWRGHGPGMGCSGAGVG*DLPAVR
Trigger: TCTGACTGCAGGAAGGTCCCAGCCCACCCCAGCCCC...GCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR TCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGTGCCCTTCCATTCACTaGGCAGGGCTGCCCCACCGG +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWCPSIH*AGLPHR
Trigger: CCGGTGGGGCAGCCCTGCTCAGTGAATGGAAGGGCA...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCGCTGCCCAGGCTCCCTaGATCCCCGTCCTGCTGATT +
Preference number: 4 (lower is better)
Translates to: PVPALLPQAPGTRWRGHGAAQAP*IPVLLI
Trigger: AATCAGCAGGACGGGGATTCAGGGAGCCTGGGCAGC...GCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGGCAGGGACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp GCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGCTCCTCTGTCCACAGTaGGGCCCAGAGGCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AAQLPGSRALTVAPSLSLLLCPQ*GPEAQS
Trigger: GCTCTGCGCCTCTGGGCCTCACTGTGGACAGAGGAG...CAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGGGTGTCCGTGGCAGCTaGGGGCACTTTCCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWGVRGS*GHFPGR
Trigger: TCGCCCAGGAAAGTGCCCGCAGCTGCCACGGACACC...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGCCGGCGGGCCGACTaGAGTGGGGACCAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAGRRAD*SGDQKR
Trigger: TCTCTTCTGGTCCCCACTGCAGTCGGCCCGCCGGCC...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGTTCACTGAGCAGGGCTaGCCCACCGGCCAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWFTEQG*PTGQAL
Trigger: AAGGGCCTGGCCGGTGGGGCAGCCCTGCTCAGTGAA...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGCATCCTCCGGGCTaGTGCTGTCGACAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGRHPPG*CCRQGP
Trigger: GGGACCCTGTCGACAGCAGCAGCCCGGAGGATGCCT...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCCACCGATGCGCACGATaGAGGCATCCTCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGHRCAR*RHPPGC
Trigger: GCAGCCCGGAGGATGCCTGCATCGTGCGCATCGGTG...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp GCACGTCCCCAGGGAGGGATTGGTCCCGAACCAGAGAGGTGTCCCGTGGGGGAGGTGCCGCCTCCTGCGTaGAGCCGCCTTCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: ARPQGGIGPEPERCPVGEVPPPA*SRLLHH
Trigger: GTGGTGAAGAAGGCGGCTGCACGCAGGAGGCGGCAC...CTCCCCCACGGGACACCTCTCTGGTTCGGGACCAATCCCTCCCTGGGGACGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGGTGCCGCCTCCTGCGTaGAGCCGCCTTCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWVPPPA*SRLLHH
Trigger: GTGGTGAAGAAGGCGGCTGCACGCAGGAGGCGGCAC...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp TGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCAGAGCCTCTGGCCCGAGCTCTTaGTGGTGGGAAACGCCAGGT +
Preference number: 4 (lower is better)
Translates to: WLHCPDGRLPEEAQGARASGPSS*WWETPG
Trigger: ACCTGGCGTTTCCCACCAGCAAGAGCTCGGGCCAGA...GGCTCTGGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCCGATGCGCCGGCCGTTaGCCTTCAGCAGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCRCAGR*PSAAPS
Trigger: GGAAGGAGCTGCTGAAGGGCAACGGCCGGCGCATCG...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp CCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTCCGGACGGTCTATaGCTCCTCCTCCCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: PSSPKHRALDGGDMAQGWAPDGL*LLLPRR
Trigger: TCTTCGGGGGAGGAGGAGGCATAGACCGTCCGGAGC...CCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp AGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGATGGCAGAGGCCCCGCTaGTCCGGACGGTCTATGCCT +
Preference number: 4 (lower is better)
Translates to: SVARGMRAACMRGCRHARWQRPR*SGRSMP
Trigger: AGGCATAGACCGTCCGGAGCAGCGGGGCCTCTGCCA...TCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp CGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCTGCGGGCAGCGTGCATaGGAGGGTGCAGGCATGCGA +
Preference number: 4 (lower is better)
Translates to: RLWLHCPDGRLPEEAQGACGQRA*EGAGMR
Trigger: TCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCA...GGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp CTGTCGAGAGCTGCAGGGCCCGGGCCCTGCTCTCTCTTTGCATGGCCCTGGCTGGGCATGCGGGCAGCGTaGATGCGAGGGTGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LSRAAGPGPCSLFAWPWLGMRAA*MRGCRH
Trigger: ATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCC...CAGCCAGGGCCATGCAAAGAGAGAGCAGGGCCCGGGCCCTGCAGCTCTCGACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR GCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGCGTGGCACGTGGCATaGGGGCAGCGTGCATGCGAG +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQAWHVA*GQRACE
Trigger: CTCGCATGCACGCTGCCCGCATGCCACGTGCCACGC...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp AGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGCCGAGAGCCCAGCAGGATaGTCGCCCTCAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SAASRFPGTDCGSLPVPAESPAG*SPSAAP
Trigger: AGGGGCTGCTGAGGGCGAGCATCCTGCTGGGCTCTC...GGCAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCGGAGGGGTCACCTCCTaGCGAGATGCAACTCCGGCT +
Preference number: 4 (lower is better)
Translates to: PVPALLPQAPGTRWRGHGGGVTS*RDATPA
Trigger: AGCCGGAGTTGCATCTCGCCAGGAGGTGACCCCTCC...GCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGGCAGGGACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGGCCGGCCCTACTACATaGTGTCCGTGGCAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: AAQLPGSRALTVAPSLSLAGPTT*CPWQLR
Trigger: CCGCAGCTGCCACGGACACCATGTAGTAGGGCCGGC...CAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGCCGGCCCTACTACATaGTGTCCGTGGCAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGAGPTT*CPWQLR
Trigger: CCGCAGCTGCCACGGACACCATGTAGTAGGGCCGGC...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAACCATCGCAGCTCACTaGGCGCCGCAGCCGGCCCTA +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLATIAAH*APQPAL
Trigger: TAGGGCCGGCTGCGGCGCCCAGTGAGCTGCGATGGT...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGACAGAGGCTGGGCCGTTaGCAGCCTCGTCACCGGGGT +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRQRLGR*QPRHRG
Trigger: ACCCCGGTGACGAGGCTGCCAACGGCCCAGCCTCTG...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGAAGGGTCCCCAGAGGCTaGGCCGTTGGCAGCCTCGTC +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRRVPRG*AVGSLV
Trigger: GACGAGGCTGCCAACGGCCCAGCCTCTGGGGACCCT...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGCACCTGGCTCCCCGCTaGCACTGGTGTCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQHLAPR*HWCLAQ
Trigger: CTGGGCCAGACACCAGTGCCAGCGGGGAGCCAGGTG...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGCTGCCCACACCGGATaGCGCTGTCCTCTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAAAHTG*RCPLAG
Trigger: CCCCGCAAGAGGACAGCGCCATCCGGTGTGGGCAGC...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCACCAGCTCCTCGGGGTTaGCTGCGCTGGACGAGGAGG +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAPAPRG*LRWTRR
Trigger: CCTCCTCGTCCAGCGCAGCCAACCCCGAGGAGCTGG...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CCA 90 bp CTGCAGCTGCAAGGGCTGGCAGAGGCCCCGCTGCTCCGGACGGTCTATGCCTCCTCCTTCCGCCCCTTCTaGCCCGAGCTCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LQLQGLAEAPLLRTVYASSFRPF*PELLLV
Trigger: CACCAGCAAGAGCTCGGGCCAGAAGGGGCGGAAGGA...GGAGGCATAGACCGTCCGGAGCAGCGGGGCCTCTGCCAGCCCTTGCAGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR CCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGTGCAGCTGCAAGGGCTaGCAGAGGCCCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQCSCKG*QRPRCS
Trigger: GGAGCAGCGGGGCCTCTGCCAGCCCTTGCAGCTGCA...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CCA 90 bp AGCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTTGCAGCTGCAAGGGCTaGCAGAGGCCCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SSAASRFPGTDCGSLPVPCSCKG*QRPRCS
Trigger: GGAGCAGCGGGGCCTCTGCCAGCCCTTGCAGCTGCA...AGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCGAGCAAGGGGTCTGTaGCTACAGCGTGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: PVPALLPQAPGTRWRGHGRARGL*LQRGTW
Trigger: CCACGTGCCACGCTGTAGCCACAGACCCCTTGCTCG...GCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGGCAGGGACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp CTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCCGAGCAAGGGGTCTGTaGCTACAGCGTGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: LLPQAPGTRWRGHGPGMGRARGL*LQRGTW
Trigger: CCACGTGCCACGCTGTAGCCACAGACCCCTTGCTCG...GCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp CGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGACGACATTGGACAGGGCCAGGCATCTaGCTGGCTGCGTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: RGMRAACMRGCRHARRHWTGPGI*LAAWPP
Trigger: AGGGGGCCACGCAGCCAGCCAGATGCCTGGCCCTGT...CCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTCCGGGAGGGGGTGCCTaGGTGGGGAAGCTATGTTGG +
Preference number: 4 (lower is better)
Translates to: RALDGGDMAQGWAAAARAPGGGA*VGKLCW
Trigger: CCAACATAGCTTCCCCACCCAGGCACCCCCTCCCGG...AGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp AGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGAAGGTGTGCGGGGGCCTaGGGGCCGCACATCCTTACT +
Preference number: 4 (lower is better)
Translates to: SVARGMRAACMRGCRHARRCAGA*GPHILT
Trigger: AGTAAGGATGTGCGGCCCCCAGGCCCCCGCACACCT...TCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp AGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGACGTAGGTGGTGGGTATaGAGGAGGCAGCGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: SVARGMRAACMRGCRHARRRWWV*RRQRAG
Trigger: ACCGGCTCGCTGCCTCCTTCATACCCACCACCTACG...TCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGTAGGTGGTGGGTATaGAGGAGGCAGCGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWRRWWV*RRQRAG
Trigger: ACCGGCTCGCTGCCTCCTTCATACCCACCACCTACG...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR TCA 90 bp CCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGCCAGGTAGATGGGCGTaGAGAGGGCAGTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PSSPKHRALDGGDMAQGWPGRWA*RGQCRA
Trigger: TGCTCTGCACTGCCCTCTTCACGCCCATCTACCTGG...CCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGATGCCCTTCCATTCACTaGGCAGGGCTGCCCCACCGG +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRCPSIH*AGLPHR
Trigger: CCGGTGGGGCAGCCCTGCTCAGTGAATGGAAGGGCA...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR TCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGTTGACCCTGGCGAGTaGGTCGGGCAGGAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAVDPGE*VGQEAD
Trigger: GTCTGCCTCCTGCCCGACTCACTCGCCAGGGTCAAC...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR TCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCATCGCCGCCCTGTGGTaGCACCAGGCTGCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGIAALW*HQAAEA
Trigger: AGCTTCAGCAGCCTGGTGTCACCACAGGGCGGCGAT...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR TCA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAGCACCAGGAGGGGCTaGCAGCAGACAGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCSTRRG*QQTAGP
Trigger: AGGACCTGCTGTCTGCTGTCAGCCCCTCCTGGTGCT...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCGCCCAGGACACACAGTaGAGGGCGGACAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCAQDTQ*RADRQL
Trigger: CAGCTGTCTGTCCGCCCTGCACTGTGTGTCCTGGGC...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGCAGCACGGGTCGTCTaGCCGCTGGCGCTTCTCGTA +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAAARVV*PLALLV
Trigger: TACGAGAAGCGCCAGCGGGCAGACGACCCGTGCTGC...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp CTACAGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGCAGTGCAGAGCAGCTaGAGGCAGCACGGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: LQRGTWHAGSVHARVQACAVQSS*RQHGSS
Trigger: AGACGACCCGTGCTGCCTGCAGCTGCTCTGCACTGC...GCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGCAGTGCAGAGCAGCTaGAGGCAGCACGGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGAVQSS*RQHGSS
Trigger: AGACGACCCGTGCTGCCTGCAGCTGCTCTGCACTGC...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGAGCCGGGCGGCCCCATTaGGGATTCTCTGCCCGATCT +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRAGRPH*GFSARS
Trigger: AGATCGGGCAGAGAATCCGCAATGGGGCCGCCCGGC...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp CTGCAGCTGCAAGGGCTGGCAGAGGCCCCGCTGCTCCGGACGGTCTATGCCTCCATGGCGCTGTCCTCTTaGGGGGCATGCAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LQLQGLAEAPLLRTVYASMALSS*GACRCV
Trigger: CACACACCTGCATGCCCCGCAAGAGGACAGCGCCAT...GGAGGCATAGACCGTCCGGAGCAGCGGGGCCTCTGCCAGCCCTTGCAGCTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR GCA 90 bp CCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCCTCTCCAGGACCTTCTaGAGGTTGTCGGGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: PQAPGTRWRGHGPGMGCSLSRTF*RLSGVH
Trigger: GTGCACCCCCGACAACCTGCAGAAGGTCCTGGAGAG...GCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGACGATGCGCCGGCCGTTaGCCTTCAGCAGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRRCAGR*PSAAPS
Trigger: GGAAGGAGCTGCTGAAGGGCAACGGCCGGCGCATCG...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR GCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGTGGCAGAGGCCCCGCTaGTCCGGACGGTCTATGCCT +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQWQRPR*SGRSMP
Trigger: AGGCATAGACCGTCCGGAGCAGCGGGGCCTCTGCCA...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR GCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGATGGCAGAGGCCCCGCTaGTCCGGACGGTCTATGCCT +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRWQRPR*SGRSMP
Trigger: AGGCATAGACCGTCCGGAGCAGCGGGGCCTCTGCCA...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR GCA 90 bp CTGCAGCTGCAAGGGCTGGCAGAGGCCCCGCTGCTCCGGACGGTCTATGCCTCCGCGAGGGTGCAGGCATaGGAGACGACATTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LQLQGLAEAPLLRTVYASARVQA*ETTLAA
Trigger: TGCTGCCAATGTCGTCTCGCATGCCTGCACCCTCGC...GGAGGCATAGACCGTCCGGAGCAGCGGGGCCTCTGCCAGCCCTTGCAGCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR GCA 90 bp CTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCGCGTGCATGCGAGGGTaGAGGCATGCGAGACGACAT +
Preference number: 4 (lower is better)
Translates to: LLPQAPGTRWRGHGPGMGACMRG*RHARRH
Trigger: ATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGC...GCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCACTCTGCAGCGTTGTCTaGCCCAGCACAGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLALCSVV*PSTGPG
Trigger: GCCTGGCCCTGTGCTGGGGCAGACAACGCTGCAGAG...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGAGGCTCCCTGGGCTCTaGAGCGTTGTCTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQRLPGL*SVVCPS
Trigger: GCTGGGGCAGACAACGCTGCAGAGCCCAGGGAGCCT...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp AGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGATGCCCGGGCCTCAACTaGTCTCCCTGTGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SVARGMRAACMRGCRHARCPGLN*SPCAGS
Trigger: ACTGCCTGCACAGGGAGAGCAGTTGAGGCCCGGGCA...TCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGCATGGTTCACCTCGGTaGGCCATGCGGAGGCCTACT +
Preference number: 4 (lower is better)
Translates to: PSSPKHRALDGGDMAQGWHGSPR*AMRRPT
Trigger: AGTAGGCCTCCGCATGGCCCACCGAGGTGAACCATG...CCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGACGACATTGGCGAGTTGGGGGCAGCTaGAGGAGGGGTCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: RGMRAACMRGCRHARRHWRVGGS*RRGHLL
Trigger: CAGGAGGTGACCCCTCCTCCAGCTGCCCCCAACTCG...CCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGACTGCGGGCACTTTCCTaGGCGAGGGTGGGCGAGTTG +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRLRALS*ARVGEL
Trigger: CAACTCGCCCACCCTCGCCCAGGAAAGTGCCCGCAG...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGTTATGGTTGGGCGTCTaGCCCCTTGGGCCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQLWLGV*PLGPPP
Trigger: TGGCGGGGGCCCAAGGGGCCAGACGCCCAACCATAA...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCCTTGCTGTTGGCACCTaGCTCCCCGCTGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGLAVGT*LPAGTG
Trigger: ACCAGTGCCAGCGGGGAGCCAGGTGCCAACAGCAAG...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp AGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGAAAGGCGGAGACCTCATaGTCGAAGGCCTCGTCGGGG +
Preference number: 4 (lower is better)
Translates to: SVARGMRAACMRGCRHARKAETS*SKASSG
Trigger: CCCCGACGAGGCCTTCGACCATGAGGTCTCCGCCTT...TCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCGGCCCGAGCTCTTGCTaGTGGGAAACGCCAGGTACT +
Preference number: 4 (lower is better)
Translates to: PQAPGTRWRGHGPGMGCSGPSSC*WETPGT
Trigger: AGTACCTGGCGTTTCCCACCAGCAAGAGCTCGGGCC...GCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp AGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGATCCTTCCGCCCCTTCTaGCCCGAGCTCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SVARGMRAACMRGCRHARSFRPF*PELLLV
Trigger: CACCAGCAAGAGCTCGGGCCAGAAGGGGCGGAAGGA...TCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp CGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTATGGCTACTGGCAGGTaGTCCGTCAGGCCGGACAGC +
Preference number: 4 (lower is better)
Translates to: RALDGGDMAQGWAAAARAMATGR*SVRPDS
Trigger: GCTGTCCGGCCTGACGGACCACCTGCCAGTAGCCAT...AGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp GCACGTCCCCAGGGAGGGATTGGTCCCGAACCAGAGAGGTGTCCCGTGGGGGAGCAGTCGCATGGCTACTaGCAGGTGGTCCGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: ARPQGGIGPEPERCPVGEQSHGY*QVVRQA
Trigger: GGCCTGACGGACCACCTGCCAGTAGCCATGCGACTG...CTCCCCCACGGGACACCTCTCTGGTTCGGGACCAATCCCTCCCTGGGGACGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGTCGCATGGCTACTaGCAGGTGGTCCGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWQSHGY*QVVRQA
Trigger: GGCCTGACGGACCACCTGCCAGTAGCCATGCGACTG...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CCA 90 bp AGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGCCGACATGGCCCAGGGATaGGCTGCAGCTGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SAASRFPGTDCGSLPVPADMAQG*AAAARA
Trigger: AGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTC...GGCAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp GCACGTCCCCAGGGAGGGATTGGTCCCGAACCAGAGAGGTGTCCCGTGGGGGAGCTACAGCGTGGCACGTaGCATGCGGGCAGCGTGCAT +
Preference number: 4 (lower is better)
Translates to: ARPQGGIGPEPERCPVGELQRGT*HAGSVH
Trigger: ATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAG...CTCCCCCACGGGACACCTCTCTGGTTCGGGACCAATCCCTCCCTGGGGACGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp AGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGATCTGTGGCTACAGCGTaGCACGTGGCATGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SVARGMRAACMRGCRHARSVATA*HVACGQ
Trigger: CTGCCCGCATGCCACGTGCCACGCTGTAGCCACAGA...TCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp GCACGTCCCCAGGGAGGGATTGGTCCCGAACCAGAGAGGTGTCCCGTGGGGGAGATCTGGCTGGCTGCGTaGCCCCCTCTTGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: ARPQGGIGPEPERCPVGEIWLAA*PPLGPS
Trigger: AGAGGGACCAAGAGGGGGCCACGCAGCCAGCCAGAT...CTCCCCCACGGGACACCTCTCTGGTTCGGGACCAATCCCTCCCTGGGGACGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGGCCCCCGCGCCTTGTaGCTTCCTTTGAGACTGGGC +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQGPRAL*LPLRLG
Trigger: GCCCAGTCTCAAAGGAAGCCACAAGGCGCGGGGGCC...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCTGCTCTCTCTTTGCATaGCCCTGGCTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PVPALLPQAPGTRWRGHGCSLFA*PWLLGP
Trigger: AGGGCCCAGCAGCCAGGGCCATGCAAAGAGAGAGCA...GCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGGCAGGGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR TCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCCAGGTAGATGGGCGTaGAGAGGGCAGTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWPGRWA*RGQCRA
Trigger: TGCTCTGCACTGCCCTCTTCACGCCCATCTACCTGG...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR TCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGAATCGCCGCCCTGTGGTaGCACCAGGCTGCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRIAALW*HQAAEA
Trigger: AGCTTCAGCAGCCTGGTGTCACCACAGGGCGGCGAT...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR TCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGCTGCCCAGGCTCCCTaGATCCCCGTCCTGCTGATT +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQAAQAP*IPVLLI
Trigger: AATCAGCAGGACGGGGATTCAGGGAGCCTGGGCAGC...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR TCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGATAGGCCACGTCCATaGTGGGGTAGCGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGDRPRP*WGSGWQ
Trigger: TTGCCAGCCGCTACCCCATCATGGACGTGGCCTATC...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR TCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGATCAGCCAGCCAGTCCTaGAGCAGGTCCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRSASQS*SRSSCP
Trigger: TGGGCAGCTGGACCTGCTTCAGGACTGGCTGGCTGA...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR TCA 90 bp CCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGGTCCCTGTAGTGGGTaGACAGGGAGTGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSSPKHRALDGGDMAQGWGPCSG*TGSVAA
Trigger: AGCAGCAACACTCCCTGTTCACCCACTACAGGGACC...CCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR TCA 90 bp GCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGAGACTCTGTTGTGCCTaGGCTGGGGAAGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: AAQLPGSRALTVAPSLSLRLCCA*AGEGTL
Trigger: CAGGGTCCCTTCCCCAGCTCAGGCACAACAGAGTCT...CAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGCCTCCTCGCCACCGATaGGCACGATGCAGGCATCCT +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQPPRHR*ARCRHP
Trigger: AGGATGCCTGCATCGTGCGCATCGGTGGCGAGGAGG...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGGGCATGCAGGTGTGTaGAGGCGATGTACCCGACGA +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGGHAGV*RRCTRR
Trigger: TCGTCGGGTACATCGCCTGCACACACCTGCATGCCC...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR GCA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCGGGCATGCAGGTGTGTaGAGGCGATGTACCCGACGA +
Preference number: 4 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCGHAGV*RRCTRR
Trigger: TCGTCGGGTACATCGCCTGCACACACCTGCATGCCC...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp CAGCTGGAGGCTCCTGGGGCGGGCCTGACTCCTCTGTCCACAGTGAGGCCCAGATCCTCTTGCGGGGCATaGAGGTGTGTGCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: QLEAPGAGLTPLSTVRPRSSCGA*RCVQAM
Trigger: CATCGCCTGCACACACCTGCATGCCCCGCAAGAGGA...TCTGGGCCTCACTGTGGACAGAGGAGTCAGGCCCGCCCCAGGAGCCTCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCTCCTCTTGCGGGGCATaGAGGTGTGTGCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGSSCGA*RCVQAM
Trigger: CATCGCCTGCACACACCTGCATGCCCCGCAAGAGGA...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR GCA 90 bp CTGTCGAGAGCTGCAGGGCCCGGGCCCTGCTCTCTCTTTGCATGGCCCTGGCTGTCTGGCCCGAGCTCTTaGTGGTGGGAAACGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSRAAGPGPCSLFAWPWLSGPSS*WWETPG
Trigger: ACCTGGCGTTTCCCACCAGCAAGAGCTCGGGCCAGA...CAGCCAGGGCCATGCAAAGAGAGAGCAGGGCCCGGGCCCTGCAGCTCTCGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR GCA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCGCAGCATGTAGTCGATaGGCCGGCCGTTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCAACSR*AGRCPS
Trigger: TGAAGGGCAACGGCCGGCGCATCGACTACATGCTGC...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp CTACAGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGCAGCATGTAGTCGATaGGCCGGCCGTTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LQRGTWHAGSVHARVQACAACSR*AGRCPS
Trigger: TGAAGGGCAACGGCCGGCGCATCGACTACATGCTGC...GCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGCTCCGGACGGTCTATaGCTCCTCCTCCCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAAPDGL*LLLPRR
Trigger: TCTTCGGGGGAGGAGGAGGCATAGACCGTCCGGAGC...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR GCA 90 bp AGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGCCGCGTGCATGCGAGGGTaGAGGCATGCGAGACGACAT +
Preference number: 4 (lower is better)
Translates to: SAASRFPGTDCGSLPVPAACMRG*RHARRH
Trigger: ATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGC...GGCAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCCGTTTATGGCTCCACTaGCCAGATGGGAGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGRLWLH*PDGRLP
Trigger: CGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACG...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCCCGAGCTCTTGTTCTaGAGGTTGTCGGGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWPELLF*RLSGVH
Trigger: GTGCACCCCCGACAACCTGCAGAACAAGAGCTCGGG...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568373.5
CDS-3UTR CCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGCGGGCCGACTGCAGTaGGGACCAGAAGAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQAGRLQ*GPEEKA
Trigger: GGCTTTCTCTTCTGGTCCCCACTGCAGTCGGCCCGC...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp CAGCTCTGCCATGCTGAACTTGGGTGCCAGTACCACACCCTGCCCTGGGCATGCAGGGTCCCCAGAGGCTaGGCCGTTGGCAGCCTCGTC +
Preference number: 4 (lower is better)
Translates to: QLCHAELGCQYHTLPWACRVPRG*AVGSLV
Trigger: GACGAGGCTGCCAACGGCCCAGCCTCTGGGGACCCT...GCATGCCCAGGGCAGGGTGTGGTACTGGCACCCAAGTTCAGCATGGCAGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGACAGGAGCTTGCTGTTaGCACCTGGCTCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQTGACC*HLAPRW
Trigger: CCAGCGGGGAGCCAGGTGCCAACAGCAAGCTCCTGT...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGAAAGGCGGAGACCTCATaGTCGAAGGCCTCGTCGGGG +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRKAETS*SKASSG
Trigger: CCCCGACGAGGCCTTCGACCATGAGGTCTCCGCCTT...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp AGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGCCCCAGCAGAGTACCGATaGCCCACGGCTTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SAASRFPGTDCGSLPVPAPAEYR*PTASPH
Trigger: GTGAGGAGAAGCCGTGGGCCATCGGTACTCTGCTGG...GGCAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCCAGCAGAGTACCGATaGCCCACGGCTTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWPAEYR*PTASPH
Trigger: GTGAGGAGAAGCCGTGGGCCATCGGTACTCTGCTGG...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CCA 90 bp AGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGACCAGCAGAGTACCGATaGCCCACGGCTTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SVARGMRAACMRGCRHARPAEYR*PTASPH
Trigger: GTGAGGAGAAGCCGTGGGCCATCGGTACTCTGCTGG...TCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGAATGGCTACTGGCAGGTaGTCCGTCAGGCCGGACAGC +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRMATGR*SVRPDS
Trigger: GCTGTCCGGCCTGACGGACCACCTGCCAGTAGCCAT...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCACAGTCGCATGGCTACTaGCAGGTGGTCCGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAQSHGY*QVVRQA
Trigger: GGCCTGACGGACCACCTGCCAGTAGCCATGCGACTG...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGACATGGCCCAGGGATaGGCTGCAGCTGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLADMAQG*AAAARA
Trigger: AGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTC...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCATCGATGGAGGGGACATaGCCCAGGGATGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLASMEGT*PRDGLQ
Trigger: CTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGA...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGCTACAGCGTGGCACGTaGCATGCGGGCAGCGTGCAT +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQLQRGT*HAGSVH
Trigger: ATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAG...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp CTGCAGCTGCAAGGGCTGGCAGAGGCCCCGCTGCTCCGGACGGTCTATGCCTCCTTTGGAGTTTGGCCTTaGGTGAGGCCCGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LQLQGLAEAPLLRTVYASFGVWP*VRPEQG
Trigger: CCCTTGCTCGGGCCTCACCCAAGGCCAAACTCCAAA...GGAGGCATAGACCGTCCGGAGCAGCGGGGCCTCTGCCAGCCCTTGCAGCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR CCA 90 bp ATCATTGTAAGAGTGGCCTGGGGCGTGGGGTTTCAGGGAGCGGCTGTCGAGAGCGGAGCCGGCCCACACTaGAGGCGGGAGAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: IIVRVAWGVGFQGAAVESGAGPH*RRESWW
Trigger: CCACCAGCTCTCCCGCCTCCAGTGTGGGCCGGCTCC...GCTCTCGACAGCCGCTCCCTGAAACCCCACGCCCCAGGCCACTCTTACAATGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR CCA 90 bp CAGCTCTGCCATGCTGAACTTGGGTGCCAGTACCACACCCTGCCCTGGGCATGCGCCGGGGTCCCCTTGTaGCCTTGGTGTTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QLCHAELGCQYHTLPWACAGVPL*PWCWLG
Trigger: CCCCAGCCAACACCAAGGCCACAAGGGGACCCCGGC...GCATGCCCAGGGCAGGGTGTGGTACTGGCACCCAAGTTCAGCATGGCAGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CAGCTGGAGGCTCCTGGGGCGGGCCTGACTCCTCTGTCCACAGTGAGGCCCAGACATTTCCTTCCTCAGTaGCCCCCGCGCCTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: QLEAPGAGLTPLSTVRPRHFLPQ*PPRLVA
Trigger: AGCCACAAGGCGCGGGGGCCACTGAGGAAGGAAATG...TCTGGGCCTCACTGTGGACAGAGGAGTCAGGCCCGCCCCAGGAGCCTCCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCACCTCCTGGGGTGAGTaGGAGAGGGGAGAAACAGCC +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGTSWGE*ERGETA
Trigger: GGCTGTTTCTCCCCTCTCCCACTCACCCCAGGAGGT...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574662.1
3UTR CAA 72 bp CAGGGCCAGGCATCTGGCTGGCTGCGTGGCCCCCTCTaGGTCCCTCTTGCAGCTCAATGGGTGACAAGGCAC +
Preference number: 4 (lower is better)
Translates to: QGQASGWLRGPL*VPLAAQWVTRH
Trigger: GTGCCTTGTCACCCATTGAGCTGCAAGAGGGACCAAGAGGGGGCCACGCAGCCAGCCAGATGCCTGGCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp GCACGTCCCCAGGGAGGGATTGGTCCCGAACCAGAGAGGTGTCCCGTGGGGGAGCTTGTCTTCCAGCCGTaGATAGATGTAGGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: ARPQGGIGPEPERCPVGELVFQP*IDVGPA
Trigger: CGCCGGCCCTACATCTATTCACGGCTGGAAGACAAG...CTCCCCCACGGGACACCTCTCTGGTTCGGGACCAATCCCTCCCTGGGGACGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCTTGTCTTCCAGCCGTaGATAGATGTAGGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWLVFQP*IDVGPA
Trigger: CGCCGGCCCTACATCTATTCACGGCTGGAAGACAAG...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR TCA 90 bp GCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGGAATCCCCGTCCTGCTaGTTATGGTTGGGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: AAQLPGSRALTVAPSLSLESPSC*LWLGVW
Trigger: CCAGACGCCCAACCATAATCAGCAGGACGGGGATTC...CAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGATAGGCCACGTCCATaGTGGGGTAGCGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQDRPRP*WGSGWQ
Trigger: TTGCCAGCCGCTACCCCATCATGGACGTGGCCTATC...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR TCA 90 bp AGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGCCGGTCCCTGTAGTGGGTaGACAGGGAGTGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SAASRFPGTDCGSLPVPAGPCSG*TGSVAA
Trigger: AGCAGCAACACTCCCTGTTCACCCACTACAGGGACC...GGCAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR TCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCCCAGCTCTGCCATGCTaGACTTGGGTGCCAGTACCA +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGPALPC*TWVPVP
Trigger: TGGTACTGGCACCCAAGTTCAGCATGGCAGAGCTGG...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GCAGCTCAATGGGTGACAAGGCACAGCATCAGGGCACCAGCACCAGGAGGGGCTTTCACTGAGCAGGGCTaGCCCACCGGCCAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: AAQWVTRHSIRAPAPGGAFTEQG*PTGQAL
Trigger: AAGGGCCTGGCCGGTGGGGCAGCCCTGCTCAGTGAA...AGCCCCTCCTGGTGCTGGTGCCCTGATGCTGTGCCTTGTCACCCATTGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGCCATTGCGGATTCTCTaGCCGATCTCCTTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQPLRIL*PISLAR
Trigger: GCGGGCCAAGGAGATCGGGCAGAGAATCCGCAATGG...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp GCAGCTCAATGGGTGACAAGGCACAGCATCAGGGCACCAGCACCAGGAGGGGCTGCCGGGCGGCCCCATTaGGGATTCTCTGCCCGATCT +
Preference number: 4 (lower is better)
Translates to: AAQWVTRHSIRAPAPGGAAGRPH*GFSARS
Trigger: AGATCGGGCAGAGAATCCGCAATGGGGCCGCCCGGC...AGCCCCTCCTGGTGCTGGTGCCCTGATGCTGTGCCTTGTCACCCATTGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGAGGGCATGCAGGTGTGTaGAGGCGATGTACCCGACGA +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRGHAGV*RRCTRR
Trigger: TCGTCGGGTACATCGCCTGCACACACCTGCATGCCC...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR GCA 90 bp GATCCCCGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGATGGCGCTGTCCTCTTaGGGGGCATGCAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: DPRLWLHCPDGRLPEEAQMALSS*GACRCV
Trigger: CACACACCTGCATGCCCCGCAAGAGGACAGCGCCAT...CTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGAATGGCGCTGTCCTCTTaGGGGGCATGCAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRMALSS*GACRCV
Trigger: CACACACCTGCATGCCCCGCAAGAGGACAGCGCCAT...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR GCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGCAGCATGTAGTCGATaGGCCGGCCGTTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQAACSR*AGRCPS
Trigger: TGAAGGGCAACGGCCGGCGCATCGACTACATGCTGC...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR GCA 90 bp GATCCCCGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGCCAGTACCACACCCTaGCCTGGGCATGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: DPRLWLHCPDGRLPEEAQASTTP*PGHAAT
Trigger: AGTTGCTGCATGCCCAGGGCAGGGTGTGGTACTGGC...CTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GCACGTCCCCAGGGAGGGATTGGTCCCGAACCAGAGAGGTGTCCCGTGGGGGAGGCTGTTGGCCAGCTCTaGCATGCTGAACTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: ARPQGGIGPEPERCPVGEAVGQL*HAELGC
Trigger: GCACCCAAGTTCAGCATGGCAGAGCTGGCCAACAGC...CTCCCCCACGGGACACCTCTCTGGTTCGGGACCAATCCCTCCCTGGGGACGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGCAGGAGGCAGACGTTaGCAGTGGCAAAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RALDGGDMAQGWAAAARAAGGRR*QWQSRS
Trigger: GCTTCTGCTTTGCCACTGCCAACGTCTGCCTCCTGC...AGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCACCTGCTGATTATGGTTaGGCGTCTGGCCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAPADYG*ASGPLG
Trigger: GCCCAAGGGGCCAGACGCCCAACCATAATCAGCAGG...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp CAGCTGGAGGCTCCTGGGGCGGGCCTGACTCCTCTGTCCACAGTGAGGCCCAGAACAGGAAGTCCAGGTTaGCGGGGAAGAAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: QLEAPGAGLTPLSTVRPRTGSPG*RGRRRR
Trigger: TCTCCGCCTTCTTCCCCGCCAACCTGGACTTCCTGT...TCTGGGCCTCACTGTGGACAGAGGAGTCAGGCCCGCCCCAGGAGCCTCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp AGCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGGCCCGAGCTCTTGCTaGTGGGAAACGCCAGGTACT +
Preference number: 4 (lower is better)
Translates to: SSAASRFPGTDCGSLPVPGPSSC*WETPGT
Trigger: AGTACCTGGCGTTTCCCACCAGCAAGAGCTCGGGCC...AGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGACACCATCAGTCGCATaGCTACTGGCAGGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWTPSVA*LLAGGP
Trigger: CGGACCACCTGCCAGTAGCCATGCGACTGATGGTGT...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR TCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAAGTCGATGTAAATTTTaGTCTGGGGCCGGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLASRCKF*SGAGRP
Trigger: GGGCCGCCCGGCCCCAGATCAAAATTTACATCGACT...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR TCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGAATCCCCGTCCTGCTaGTTATGGTTGGGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQESPSC*LWLGVW
Trigger: CCAGACGCCCAACCATAATCAGCAGGACGGGGATTC...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR TCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGTCCCTGTAGTGGGTaGACAGGGAGTGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAGPCSG*TGSVAA
Trigger: AGCAGCAACACTCCCTGTTCACCCACTACAGGGACC...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR TCA 90 bp AGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGATTGCAGCTCAATGGGTaGCAAGGCACAGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: SVARGMRAACMRGCRHARLQLNG*QGTASG
Trigger: CCCTGATGCTGTGCCTTGTCACCCATTGAGCTGCAA...TCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp CGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGACGACATTGGGCCCAGTCGCTTGTGTaGGCAGAGTACCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RGMRAACMRGCRHARRHWAQSLV*AEYQLL
Trigger: AAGCAGCTGGTACTCTGCTCACACAAGCGACTGGGC...CCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GCAGCTCAATGGGTGACAAGGCACAGCATCAGGGCACCAGCACCAGGAGGGGCTCCTCCTCGCCACCGATaGGCACGATGCAGGCATCCT +
Preference number: 4 (lower is better)
Translates to: AAQWVTRHSIRAPAPGGAPPRHR*ARCRHP
Trigger: AGGATGCCTGCATCGTGCGCATCGGTGGCGAGGAGG...AGCCCCTCCTGGTGCTGGTGCCCTGATGCTGTGCCTTGTCACCCATTGAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGCCTTGTACAGGAGCTTaGTGTTGGCACCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQPCTGA*CWHLAP
Trigger: GGGAGCCAGGTGCCAACAGCAAGCTCCTGTACAAGG...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp CCTGTCCCTGCCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCTTGTCAAACACCTCCTaGAGGCACAGGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PVPALLPQAPGTRWRGHGLSNTS*RHRKSR
Trigger: CCTGGACTTCCTGTGCCTGCAGGAGGTGTTTGACAA...GCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGGCAGGGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp CTACAGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCACAGACGACGTCAAATaGCACCAGCTCCTCGGGGTT +
Preference number: 4 (lower is better)
Translates to: LQRGTWHAGSVHARVQACTDDVK*HQLLGV
Trigger: AACCCCGAGGAGCTGGTGGCATTTGACGTCGTCTGT...GCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCACAGACGACGTCAAATaGCACCAGCTCCTCGGGGTT +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGTDDVK*HQLLGV
Trigger: AACCCCGAGGAGCTGGTGGCATTTGACGTCGTCTGT...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR GCA 90 bp CAGCTGGAGGCTCCTGGGGCGGGCCTGACTCCTCTGTCCACAGTGAGGCCCAGAGCAGGTTGTCGGGGGTaGACACATCCTCATCGTACA +
Preference number: 4 (lower is better)
Translates to: QLEAPGAGLTPLSTVRPRAGCRG*THPHRT
Trigger: TGTACGATGAGGATGTGTGCACCCCCGACAACCTGC...TCTGGGCCTCACTGTGGACAGAGGAGTCAGGCCCGCCCCAGGAGCCTCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGCAGGTTGTCGGGGGTaGACACATCCTCATCGTACA +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGAGCRG*THPHRT
Trigger: TGTACGATGAGGATGTGTGCACCCCCGACAACCTGC...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR GCA 90 bp CGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCCCCCACCCCCGTTTATaGTGTGAGTCCCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RLWLHCPDGRLPEEAQGAPHPRL*CESLLP
Trigger: AGGAAGAAGGGACTCACAGCATAAACGGGGGTGGGG...GGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GATCCCCGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGAGCAACTGTCAGCCTTaGTGCCCCAGCTTGCGCACT +
Preference number: 4 (lower is better)
Translates to: DPRLWLHCPDGRLPEEAQSNCQP*CPSLRT
Trigger: AGTGCGCAAGCTGGGGCAGCAAGGCTGACAGTTGCT...CTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp CTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCAGACAAAACCTTCGCTaGATGACAGGAGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LLPQAPGTRWRGHGPGMGRQNLR*MTGAAL
Trigger: CAGGGCTGCTCCTGTCATGCAGCGAAGGTTTTGTCT...GCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGACTGAGGAGGGGCCACTaGGACCTTGTTGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRLRRGH*DLVVLL
Trigger: GAGAAGGACAACAAGGTCCCAGTGGCCCCTCCTCAG...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAACTACATGGTGTCCGTaGCAGCTGCGGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLATTWCP*QLRALS
Trigger: GGAAAGTGCCCGCAGCTGCCACGGACACCATGTAGT...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGCAGGAGGCAGACGTTaGCAGTGGCAAAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAAGGRR*QWQSRS
Trigger: GCTTCTGCTTTGCCACTGCCAACGTCTGCCTCCTGC...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGAACAGGAAGTCCAGGTTaGCGGGGAAGAAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRTGSPG*RGRRRR
Trigger: TCTCCGCCTTCTTCCCCGCCAACCTGGACTTCCTGT...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGATTTGGAGTTTGGCCTTaGGTGAGGCCCGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRFGVWP*VRPEQG
Trigger: CCCTTGCTCGGGCCTCACCCAAGGCCAAACTCCAAA...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGTCGGATCCCCGTTTATaGCTCCACTGCCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQSDPRL*LHCPDG
Trigger: CCCATCTGGGCAGTGGAGCCATAAACGGGGATCCGA...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CAGCTCTGCCATGCTGAACTTGGGTGCCAGTACCACACCCTGCCCTGGGCATGCGAGGGGGTGCCTGGGTaGGGAAGCTATGTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QLCHAELGCQYHTLPWACEGVPG*GSYVGV
Trigger: GACCCCAACATAGCTTCCCCACCCAGGCACCCCCTC...GCATGCCCAGGGCAGGGTGTGGTACTGGCACCCAAGTTCAGCATGGCAGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CTACAGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCAATTCTTCCACCTCCTaGGGTGAGTGGGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LQRGTWHAGSVHARVQACNSSTS*GEWERG
Trigger: TCCCCTCTCCCACTCACCCCAGGAGGTGGAAGAATT...GCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR TCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGACGATTCTTTGGTCCTaGGGTGTGCTTCCCACCTGC +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQTILWS*GVLPTC
Trigger: GCAGGTGGGAAGCACACCTCAGGACCAAAGAATCGT...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR TCA 90 bp ATCATTGTAAGAGTGGCCTGGGGCGTGGGGTTTCAGGGAGCGGCTGTCGAGAGCGAGTTTGGCCTTGGGTaGGGCCCGAGCAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: IIVRVAWGVGFQGAAVESEFGLG*GPSKGS
Trigger: AGACCCCTTGCTCGGGCCTCACCCAAGGCCAAACTC...GCTCTCGACAGCCGCTCCCTGAAACCCCACGCCCCAGGCCACTCTTACAATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR GCA 90 bp CGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCGGTGTGCTTCCCACCTaGACCTTGAGAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: RLWLHCPDGRLPEEAQGAGVLPT*TLRNRA
Trigger: AGCTCTGTTTCTCAAGGTGCAGGTGGGAAGCACACC...GGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp AGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGCCGGTGTGCTTCCCACCTaGACCTTGAGAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: SAASRFPGTDCGSLPVPAGVLPT*TLRNRA
Trigger: AGCTCTGTTTCTCAAGGTGCAGGTGGGAAGCACACC...GGCAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAACAGACGACGTCAAATaGCACCAGCTCCTCGGGGTT +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLATDDVK*HQLLGV
Trigger: AACCCCGAGGAGCTGGTGGCATTTGACGTCGTCTGT...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR GCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGGTGAACAGGGAGTGTTaGTGCTCCAGCTTGTCGTCA +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWVNREC*CSSLSS
Trigger: TGACGACAAGCTGGAGCAGCAACACTCCCTGTTCAC...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR GCA 90 bp CGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGTGAACAGGGAGTGTTaGTGCTCCAGCTTGTCGTCA +
Preference number: 4 (lower is better)
Translates to: RALDGGDMAQGWAAAARAVNREC*CSSLSS
Trigger: TGACGACAAGCTGGAGCAGCAACACTCCCTGTTCAC...AGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGCACAGCCCCTCCTCTaGATGCAGCATGTAGTCGAT +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAAQPLL*MQHVVD
Trigger: ATCGACTACATGCTGCATGCAGAGGAGGGGCTGTGC...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR GCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGGTAATTGCCCTTGAATaGGAGACCCTGGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWVIALE*ETLGRA
Trigger: GGCTCTTCCCAGGGTCTCGCATTCAAGGGCAATTAC...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp GCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGGTAATTGCCCTTGAATaGGAGACCCTGGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: AAQLPGSRALTVAPSLSLVIALE*ETLGRA
Trigger: GGCTCTTCCCAGGGTCTCGCATTCAAGGGCAATTAC...CAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp AGGCAGATCGGGGACCACAAGCTGTTGGCCAGCTCTGCCATGCTGAACTTGGGTCTTGCTGCCCCAGCTTaGGCACTGGTGAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RQIGDHKLLASSAMLNLGLAAPA*ALVRAR
Trigger: CCTGGCCCTCACCAGTGCGCAAGCTGGGGCAGCAAG...ACCCAAGTTCAGCATGGCAGAGCTGGCCAACAGCTTGTGGTCCCCGATCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCCCTCTTGGTCCCTCTTaGAGCTCAATGGGTGACAAG +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGPLGPS*SSMGDK
Trigger: CTTGTCACCCATTGAGCTGCAAGAGGGACCAAGAGG...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GCACGTCCCCAGGGAGGGATTGGTCCCGAACCAGAGAGGTGTCCCGTGGGGGAGGTCAATGGCGAATGTTaGCCAGCCGGTCATGGTTCA +
Preference number: 4 (lower is better)
Translates to: ARPQGGIGPEPERCPVGEVNGEC*PAGHGS
Trigger: TGAACCATGACCGGCTGGCCAACATTCGCCATTGAC...CTCCCCCACGGGACACCTCTCTGGTTCGGGACCAATCCCTCCCTGGGGACGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CAGCTCTGCCATGCTGAACTTGGGTGCCAGTACCACACCCTGCCCTGGGCATGCACTCCGGCTGGTCAATaGCGAATGTTGGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: QLCHAELGCQYHTLPWACTPAGQ*RMLASR
Trigger: CCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGT...GCATGCCCAGGGCAGGGTGTGGTACTGGCACCCAAGTTCAGCATGGCAGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAGATGCAACTCCGGCTaGTCAATGGCGAATGTTGGC +
Preference number: 4 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCRCNSG*SMANVG
Trigger: GCCAACATTCGCCATTGACCAGCCGGAGTTGCATCT...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp AGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGAGGCAGACGTTGGCAGTaGCAAAGCAGAAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SVARGMRAACMRGCRHARGRRWQ*QSRSFC
Trigger: GCAAAAGCTTCTGCTTTGCCACTGCCAACGTCTGCC...TCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGGGCAGACGTTGGCAGTaGCAAAGCAGAAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWGRRWQ*QSRSFC
Trigger: GCAAAAGCTTCTGCTTTGCCACTGCCAACGTCTGCC...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp CAGCTGGAGGCTCCTGGGGCGGGCCTGACTCCTCTGTCCACAGTGAGGCCCAGAGTGAAAGAATGGCACTaGTTAGGCAGCTGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QLEAPGAGLTPLSTVRPRVKEWH*LGSWRL
Trigger: GAGCCTCCAGCTGCCTAACCAGTGCCATTCTTTCAC...TCTGGGCCTCACTGTGGACAGAGGAGTCAGGCCCGCCCCAGGAGCCTCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCCCTCTTGCAGCTCAATaGGTGACAAGGCACAGCATC +
Preference number: 4 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCPLAAQ*VTRHSI
Trigger: GATGCTGTGCCTTGTCACCCATTGAGCTGCAAGAGG...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAAACAGAGTCTTGGTATaGGCCTCGGGTGACCCGTGT +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLANRVLV*ASGDPC
Trigger: ACACGGGTCACCCGAGGCCCATACCAAGACTCTGTT...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAGGGGAGAAACAGCCTaGTCAGATTCCAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCRGETA*SDSKGI
Trigger: GATGCCCTTGGAATCTGACCAGGCTGTTTCTCCCCT...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR TCA 90 bp GCAGCTCAATGGGTGACAAGGCACAGCATCAGGGCACCAGCACCAGGAGGGGCTAGTCGATGTAAATTTTaGTCTGGGGCCGGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: AAQWVTRHSIRAPAPGGASRCKF*SGAGRP
Trigger: GGGCCGCCCGGCCCCAGATCAAAATTTACATCGACT...AGCCCCTCCTGGTGCTGGTGCCCTGATGCTGTGCCTTGTCACCCATTGAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGTTGTCAAACACCTCCTaGAGGCACAGGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQLSNTS*RHRKSR
Trigger: CCTGGACTTCCTGTGCCTGCAGGAGGTGTTTGACAA...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGTGTGCTTCCCACCTaGACCTTGAGAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAGVLPT*TLRNRA
Trigger: AGCTCTGTTTCTCAAGGTGCAGGTGGGAAGCACACC...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR GCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGTGAACAGGGAGTGTTaGTGCTCCAGCTTGTCGTCA +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAVNREC*CSSLSS
Trigger: TGACGACAAGCTGGAGCAGCAACACTCCCTGTTCAC...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR GCA 90 bp GCAGCTCAATGGGTGACAAGGCACAGCATCAGGGCACCAGCACCAGGAGGGGCTTGCCAGACTCTGTTGTaGCTGAGCTGGGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: AAQWVTRHSIRAPAPGGACQTLL*LSWGRD
Trigger: GTCCCTTCCCCAGCTCAGGCACAACAGAGTCTGGCA...AGCCCCTCCTGGTGCTGGTGCCCTGATGCTGTGCCTTGTCACCCATTGAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GCAGCTCAATGGGTGACAAGGCACAGCATCAGGGCACCAGCACCAGGAGGGGCTCATGCTGAACTTGGGTaGCAGTACCACACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: AAQWVTRHSIRAPAPGGAHAELG*QYHTLP
Trigger: GGGCAGGGTGTGGTACTGGCACCCAAGTTCAGCATG...AGCCCCTCCTGGTGCTGGTGCCCTGATGCTGTGCCTTGTCACCCATTGAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGTCCTTGGCCCGCGCTTaGGTGTTAAAAAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWSLARA*VLKRLL
Trigger: CAACAACCTTTTTAACACCCAAGCGCGGGCCAAGGA...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCGTCAGGCCGGACAGCTaGGTGATAAAACTGAATTCT +
Preference number: 4 (lower is better)
Translates to: PVPALLPQAPGTRWRGHGVRPDS*VIKLNS
Trigger: AGAATTCAGTTTTATCACCCAGCTGTCCGGCCTGAC...GCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGGCAGGGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGTGAAAGAATGGCACTaGTTAGGCAGCTGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQVKEWH*LGSWRL
Trigger: GAGCCTCCAGCTGCCTAACCAGTGCCATTCTTTCAC...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGTGTTGTGAAAGAATaGCACTGGTTAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWRVVKE*HWLGSW
Trigger: CCAGCTGCCTAACCAGTGCCATTCTTTCACAACACG...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp AGAGCTGGTGGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGCCGGCCCACACTaGAGGCGGGAGAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RAGGRAQEVLLWLVLIVFGAGPH*RRESWW
Trigger: CCACCAGCTCTCCCGCCTCCAGTGTGGGCCGGCTCC...AAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCACCAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp ATCATTGTAAGAGTGGCCTGGGGCGTGGGGTTTCAGGGAGCGGCTGTCGAGAGCTTGAATGCGAGACCCTaGGAAGAGCCCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: IIVRVAWGVGFQGAAVESLNARP*EEPWAG
Trigger: GCCAGCCCAGGGCTCTTCCCAGGGTCTCGCATTCAA...GCTCTCGACAGCCGCTCCCTGAAACCCCACGCCCCAGGCCACTCTTACAATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR CCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCACGTGGGGGAGAGGATTaGCAGAAAGAAGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLARGGED*QKEEDV
Trigger: CACATCCTCTTCTTTCTGCCAATCCTCTCCCCCACG...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGCTGCTTCTGGAAGTTaGGGGCCTCCACATCATGAA +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAAASGS*GPPHHE
Trigger: TTCATGATGTGGAGGCCCCCAACTTCCAGAAGCAGC...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CAA 72 bp TCCTTCCTCAGTGGCCCCCGCGCCTTGTGGCTTCCTTaGAGACTGGGCCTAGGGCAGGAACAGAGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SFLSGPRALWLP*RLGLGQEQSLG
Trigger: ACCAAGACTCTGTTCCTGCCCTAGGCCCAGTCTCAAAGGAAGCCACAAGGCGCGGGGGCCACTGAGGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp GCTGCTTCTGGAAGTTGGGGGCCTCCACATCATGAATCCCAGTCAAGGCTCACACTCCTCTGTCCACAGTaGGGCCCAGAGGCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AASGSWGPPHHESQSRLTLLCPQ*GPEAQS
Trigger: GCTCTGCGCCTCTGGGCCTCACTGTGGACAGAGGAG...TGTGAGCCTTGACTGGGATTCATGATGTGGAGGCCCCCAACTTCCAGAAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAATGTAATTGCCCTTaGATGCGAGACCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCKCNCP*MRDPGK
Trigger: CTTCCCAGGGTCTCGCATTCAAGGGCAATTACATTT...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR TCA 90 bp GCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGAAATGTAATTGCCCTTaGATGCGAGACCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: AAQLPGSRALTVAPSLSLKCNCP*MRDPGK
Trigger: CTTCCCAGGGTCTCGCATTCAAGGGCAATTACATTT...CAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp TGGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTCGTCACCGGGGTaGCGCCCACCGTCACCCTTG +
Preference number: 4 (lower is better)
Translates to: WPCPGSASLAGSDCVWSLASSPG*RPPSPL
Trigger: CAAGGGTGACGGTGGGCGGCACCCCGGTGACGAGGC...CAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCATCCTTGGCCCGCGCTTaGGTGTTAAAAAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLASLARA*VLKRLL
Trigger: CAACAACCTTTTTAACACCCAAGCGCGGGCCAAGGA...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGGCTGCTCTTTCAATTTaGTGGCTGCTCGCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWAALSI*WLLACQ
Trigger: TTGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGC...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCCGTCGTTACACTTGTTaGGGTAACAGTGATAGGCCA +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGRRYTC*GNSDRP
Trigger: TGGCCTATCACTGTTACCCCAACAAGTGTAACGACG...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGTCGTTACACTTGTTaGGGTAACAGTGATAGGCCA +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWRRYTC*GNSDRP
Trigger: TGGCCTATCACTGTTACCCCAACAAGTGTAACGACG...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CCA 90 bp GGATACTCTCTTCTCGGATCCCCGTTTATGGCTCCACTGCCCAGATGGGAGGCTGACATGGCCCAGGGATaGGCTGCAGCTGCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GYSLLGSPFMAPLPRWEADMAQG*AAAARA
Trigger: AGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTC...AGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATCCGAGAAGAGAGTATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp TGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCAGAGCCCATGCGAGACGACATTaGCAGCAGACAAAAATAAAG +
Preference number: 4 (lower is better)
Translates to: WLHCPDGRLPEEAQGARAHARRH*QQTKIK
Trigger: CTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATG...GGCTCTGGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTTGGCACAGGCCAGCCCCTTaGAGGGGTGGGCCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: AQEVLLWLVLIVFGVWPWHRPAP*RGGPGR
Trigger: TCTGCCCGGCCCACCCCTCCAAGGGGCTGGCCTGTG...CCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GTGCAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACGTGTTGGGGTCTGGTGTaGGGGCCCTGCCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: VQACETTLAADKNKEPWTCWGLV*GPCPGL
Trigger: GAGGCCCGGGCAGGGCCCCCACACCAGACCCCAACA...CGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CAA 72 bp GGCCAGGGCGCCACGAGGAGCGGAGGTCAGCGGGGATaGTCAAAAACAGTCCCTCAAGTTGAGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: GQGATRSGGQRG*SKTVPQVESRT
Trigger: AGTTCGAGACTCAACTTGAGGGACTGTTTTTGACAATCCCCGCTGACCTCCGCTCCTCGTGGCGCCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp GCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTTGGGCCTACTGCAGACCCTaGGGAGGGGCCACTGGGACC +
Preference number: 4 (lower is better)
Translates to: AQEVLLWLVLIVFGVWPWAYCRP*GGATGT
Trigger: GGTCCCAGTGGCCCCTCCTCAGGGTCTGCAGTAGGC...CCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGTTTCAATTTGGTGGCTaGTCGCTTGTCAAACACCTC +
Preference number: 4 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWFQFGG*SLVKHL
Trigger: GAGGTGTTTGACAAGCGAGCAGCCACCAAATTGAAA...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp AGAGCTGGTGGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGCATGCGGGCAGCGTaGATGCGAGGGTGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: RAGGRAQEVLLWLVLIVFGMRAA*MRGCRH
Trigger: ATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCC...AAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCACCAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp GCTGCTTCTGGAAGTTGGGGGCCTCCACATCATGAATCCCAGTCAAGGCTCACAGCGGGCCGACTGCAGTaGGGACCAGAAGAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: AASGSWGPPHHESQSRLTAGRLQ*GPEEKA
Trigger: GGCTTTCTCTTCTGGTCCCCACTGCAGTCGGCCCGC...TGTGAGCCTTGACTGGGATTCATGATGTGGAGGCCCCCAACTTCCAGAAGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GTGCAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACGCAGAGGCTGGGCCGTTaGCAGCCTCGTCACCGGGGT +
Preference number: 4 (lower is better)
Translates to: VQACETTLAADKNKEPWTQRLGR*QPRHRG
Trigger: ACCCCGGTGACGAGGCTGCCAACGGCCCAGCCTCTG...CGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GGATACTCTCTTCTCGGATCCCCGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCTGCTGATTATGGTTaGGCGTCTGGCCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GYSLLGSPFMAPLPRWEAPADYG*ASGPLG
Trigger: GCCCAAGGGGCCAGACGCCCAACCATAATCAGCAGG...AGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATCCGAGAAGAGAGTATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGCTCTTTCAATTTGGTaGCTGCTCGCTTGTCAAACA +
Preference number: 4 (lower is better)
Translates to: RALDGGDMAQGWAAAARAALSIW*LLACQT
Trigger: TGTTTGACAAGCGAGCAGCCACCAAATTGAAAGAGC...AGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGCTCTTTCAATTTGGTaGCTGCTCGCTTGTCAAACA +
Preference number: 4 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGALSIW*LLACQT
Trigger: TGTTTGACAAGCGAGCAGCCACCAAATTGAAAGAGC...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGAGCTGCTCTTTCAATTTaGTGGCTGCTCGCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRAALSI*WLLACQ
Trigger: TTGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGC...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CCA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCACGTCGTTACACTTGTTaGGGTAACAGTGATAGGCCA +
Preference number: 4 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLARRYTC*GNSDRP
Trigger: TGGCCTATCACTGTTACCCCAACAAGTGTAACGACG...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGTCAGGCCGGACAGCTaGGTGATAAAACTGAATTCT +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQVRPDS*VIKLNS
Trigger: AGAATTCAGTTTTATCACCCAGCTGTCCGGCCTGAC...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CCA 90 bp CCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGCATGCGAGACGACATTaGCAGCAGACAAAAATAAAG +
Preference number: 4 (lower is better)
Translates to: PSSPKHRALDGGDMAQGWHARRH*QQTKIK
Trigger: CTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATG...CCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR TCA 90 bp GCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTTGGGTTGACCCTGGCGAGTaGGTCGGGCAGGAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: AQEVLLWLVLIVFGVWPWVDPGE*VGQEAD
Trigger: GTCTGCCTCCTGCCCGACTCACTCGCCAGGGTCAAC...CCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp AGAGCTGGTGGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTTCAGCCAGCCAGTCCTaGAGCAGGTCCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RAGGRAQEVLLWLVLIVFSASQS*SRSSCP
Trigger: TGGGCAGCTGGACCTGCTTCAGGACTGGCTGGCTGA...AAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCACCAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR TCA 90 bp AGCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTTTCTTTGGCTGGTTCTaGTTGTGTTTGGAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: SSAASRFPGTDCGSLPVPFFGWF*LCLEFG
Trigger: GCCAAACTCCAAACACAATCAGAACCAGCCAAAGAA...AGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp AGGGTGCAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGCACCGATGCGCACGATaGAGGCATCCTCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RVQACETTLAADKNKEPWHRCAR*RHPPGC
Trigger: GCAGCCCGGAGGATGCCTGCATCGTGCGCATCGGTG...CCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGTTTCAATTTGGTGGCTaGTCGCTTGTCAAACACCTC +
Preference number: 4 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQFQFGG*SLVKHL
Trigger: GAGGTGTTTGACAAGCGAGCAGCCACCAAATTGAAA...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR GCA 90 bp GCTGCTTCTGGAAGTTGGGGGCCTCCACATCATGAATCCCAGTCAAGGCTCACACTCTCCAGGACCTTCTaGAGGTTGTCGGGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: AASGSWGPPHHESQSRLTLSRTF*RLSGVH
Trigger: GTGCACCCCCGACAACCTGCAGAAGGTCCTGGAGAG...TGTGAGCCTTGACTGGGATTCATGATGTGGAGGCCCCCAACTTCCAGAAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp AAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACACGAACCCGGTCGCGTGGCACGTGGCATaGGGGCAGCGTGCATGCGAG +
Preference number: 4 (lower is better)
Translates to: KEPWTKLKRRYREYTNPVAWHVA*GQRACE
Trigger: CTCGCATGCACGCTGCCCGCATGCCACGTGCCACGC...GACCGGGTTCGTGTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp GCTGCTTCTGGAAGTTGGGGGCCTCCACATCATGAATCCCAGTCAAGGCTCACACAGGGTGCCAGAGCCTaGCAGACTCTGTTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: AASGSWGPPHHESQSRLTQGARA*QTLLCL
Trigger: CAGGCACAACAGAGTCTGGCAGGCTCTGGCACCCTG...TGTGAGCCTTGACTGGGATTCATGATGTGGAGGCCCCCAACTTCCAGAAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp AGAGCTGGTGGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGACAGCAGGTCCTGGTaGTCCCTCCAGCCTCACCAG +
Preference number: 4 (lower is better)
Translates to: RAGGRAQEVLLWLVLIVFDSRSW*SLQPHQ
Trigger: CTGGTGAGGCTGGAGGGAGCACCAGGACCTGCTGTC...AAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCACCAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTTGGAGGCATCTGGCTGGCTaGGTGGCCCCCTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: AQEVLLWLVLIVFGVWPWRHLAG*VAPSWS
Trigger: GGACCAAGAGGGGGCCACGCAGCCAGCCAGATGCCT...CCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GGATACTCTCTTCTCGGATCCCCGTTTATGGCTCCACTGCCCAGATGGGAGGCTGAGCAGAGTACCAGCTaGTTCTGGAAGTTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GYSLLGSPFMAPLPRWEAEQSTS*FWKLGA
Trigger: GGCCCCCAACTTCCAGAAGCAGCTGGTACTCTGCTC...AGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATCCGAGAAGAGAGTATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CGAACTTTGAAACAGACAAAACCTTCGCTGCATGACAGGAGCAGCCCTGGAGTCTTTCCTGGGCGAGGGTaGGCGAGTTGGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RTLKQTKPSLHDRSSPGVFPGRG*ASWGQL
Trigger: CAGCTGCCCCCAACTCGCCCACCCTCGCCCAGGAAA...GACTCCAGGGCTGCTCCTGTCATGCAGCGAAGGTTTTGTCTGTTTCAAAGTTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp GCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTTGGTCAGCCAGCCAGTCCTaGAGCAGGTCCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: AQEVLLWLVLIVFGVWPWSASQS*SRSSCP
Trigger: TGGGCAGCTGGACCTGCTTCAGGACTGGCTGGCTGA...CCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR TCA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGATTGAGTCTCGAACTTTaGAACAGACAAAACCTTCGC +
Preference number: 4 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRLSLEL*NRQNLR
Trigger: GCGAAGGTTTTGTCTGTTTCAAAGTTCGAGACTCAA...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp AAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACACGAACCCGGTCGGTGTCCGTGGCAGCTaGGGGCACTTTCCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: KEPWTKLKRRYREYTNPVGVRGS*GHFPGR
Trigger: TCGCCCAGGAAAGTGCCCGCAGCTGCCACGGACACC...GACCGGGTTCGTGTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTTGGGCTCCGGACGGTCTATaGCTCCTCCTCCCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: AQEVLLWLVLIVFGVWPWAPDGL*LLLPRR
Trigger: TCTTCGGGGGAGGAGGAGGCATAGACCGTCCGGAGC...CCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp AAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACACGAACCCGGTCCAACTGCTCTCCCTGTaGAGGCAGTCGGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: KEPWTKLKRRYREYTNPVQLLSL*RQSAGG
Trigger: GCCGCCTGCCGACTGCCTGCACAGGGAGAGCAGTTG...GACCGGGTTCGTGTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTTGGCTTGCTGTTGGCACCTaGCTCCCCGCTGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: AQEVLLWLVLIVFGVWPWLAVGT*LPAGTG
Trigger: ACCAGTGCCAGCGGGGAGCCAGGTGCCAACAGCAAG...CCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GTGCAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACGGCAGACAGCAGGTCCTaGTGCTCCCTCCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: VQACETTLAADKNKEPWTADSRS*CSLQPH
Trigger: GTGAGGCTGGAGGGAGCACCAGGACCTGCTGTCTGC...CGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp AGGGTGCAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGATCAGTGGAAGGGCCTaGCCTGCACACAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RVQACETTLAADKNKEPWISGRA*PAHKAR
Trigger: CCGGGCCTTGTGTGCAGGCCAGGCCCTTCCACTGAT...CCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GCTGCTTCTGGAAGTTGGGGGCCTCCACATCATGAATCCCAGTCAAGGCTCACAGCACAGCCCCTCCTCTaGATGCAGCATGTAGTCGAT +
Preference number: 4 (lower is better)
Translates to: AASGSWGPPHHESQSRLTAQPLL*MQHVVD
Trigger: ATCGACTACATGCTGCATGCAGAGGAGGGGCTGTGC...TGTGAGCCTTGACTGGGATTCATGATGTGGAGGCCCCCAACTTCCAGAAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp AGAGCTGGTGGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGAGAGCTGGTGGCCGTaGCCAGGAAGTGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: RAGGRAQEVLLWLVLIVFESWWP*PGSASL
Trigger: CAAAGAAGCACTTCCTGGGCACGGCCACCAGCTCTC...AAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCACCAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp GCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTTGGACCCTGCCCTGGGCATaGAGCAACTGTCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: AQEVLLWLVLIVFGVWPWTLPWA*SNCQPC
Trigger: GCAAGGCTGACAGTTGCTGCATGCCCAGGGCAGGGT...CCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp TGGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGTTGGCCAGCCGGTCATaGTTCACCTCGGTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: WPCPGSASLAGSDCVWSLLASRS*FTSVGH
Trigger: ATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAA...CAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp AGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGCCAAAAATAAAGAACCCTaGACGAAGCTTAAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SAASRFPGTDCGSLPVPAKNKEP*TKLKRR
Trigger: TCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTT...GGCAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp TGGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGTCCCCAGGGAGGGATTaGTCCCGAACCAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: WPCPGSASLAGSDCVWSLSPGRD*SRTREV
Trigger: CACCTCTCTGGTTCGGGACCAATCCCTCCCTGGGGA...CAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CAA 72 bp AGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTaGGCCTTGGGTGAGGCCCGAGCAAGGGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SASLAGSDCVWS*ALGEARARGLW
Trigger: CCACAGACCCCTTGCTCGGGCCTCACCCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR TCA 90 bp AGGCAGATCGGGGACCACAAGCTGTTGGCCAGCTCTGCCATGCTGAACTTGGGTGACTTACAGACCCTGTaGAGTGAGGGTTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: RQIGDHKLLASSAMLNLGDLQTL*SEGWFC
Trigger: ACAAAACCAACCCTCACTTCACAGGGTCTGTAAGTC...ACCCAAGTTCAGCATGGCAGAGCTGGCCAACAGCTTGTGGTCCCCGATCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp CAGCTCTGCCATGCTGAACTTGGGTGCCAGTACCACACCCTGCCCTGGGCATGCAACAGTCCCTCAAGTTaGGTCTCGAACTTTGAAACA +
Preference number: 4 (lower is better)
Translates to: QLCHAELGCQYHTLPWACNSPSS*VSNFET
Trigger: TGTTTCAAAGTTCGAGACTCAACTTGAGGGACTGTT...GCATGCCCAGGGCAGGGTGTGGTACTGGCACCCAAGTTCAGCATGGCAGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp TGGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGGGGCCTCCACATCATaGATCCCAGTCAAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: WPCPGSASLAGSDCVWSLGASTS*IPVKAH
Trigger: GTGAGCCTTGACTGGGATTCATGATGTGGAGGCCCC...CAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTTGGCACCTCCTGGCGAGATaGAACTCCGGCTGGTCAATG +
Preference number: 4 (lower is better)
Translates to: AQEVLLWLVLIVFGVWPWHLLAR*NSGWSM
Trigger: CATTGACCAGCCGGAGTTGCATCTCGCCAGGAGGTG...CCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp AGGGTGCAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGCCTTGTACAGGAGCTTaGTGTTGGCACCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RVQACETTLAADKNKEPWPCTGA*CWHLAP
Trigger: GGGAGCCAGGTGCCAACAGCAAGCTCCTGTACAAGG...CCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CGAACTTTGAAACAGACAAAACCTTCGCTGCATGACAGGAGCAGCCCTGGAGTCACTACATGGTGTCCGTaGCAGCTGCGGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: RTLKQTKPSLHDRSSPGVTTWCP*QLRALS
Trigger: GGAAAGTGCCCGCAGCTGCCACGGACACCATGTAGT...GACTCCAGGGCTGCTCCTGTCATGCAGCGAAGGTTTTGTCTGTTTCAAAGTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp GCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTTGGACACCATCAGTCGCATaGCTACTGGCAGGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: AQEVLLWLVLIVFGVWPWTPSVA*LLAGGP
Trigger: CGGACCACCTGCCAGTAGCCATGCGACTGATGGTGT...CCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp TGGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGTGCGTGGCCCCCTCTTaGTCCCTCTTGCAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: WPCPGSASLAGSDCVWSLCVAPS*SLLQLN
Trigger: ATTGAGCTGCAAGAGGGACCAAGAGGGGGCCACGCA...CAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
3UTR CAA 72 bp AGCGTGCATGCGAGGGTGCAGGCATGCGAGACGACATaGGCAGCAGACAAAAATAAAGAACCCTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: SVHARVQACETT*AADKNKEPWTK
Trigger: CTTCGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR TCA 90 bp AGGCAGATCGGGGACCACAAGCTGTTGGCCAGCTCTGCCATGCTGAACTTGGGTTTCTTTGGCTGGTTCTaGTTGTGTTTGGAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: RQIGDHKLLASSAMLNLGFFGWF*LCLEFG
Trigger: GCCAAACTCCAAACACAATCAGAACCAGCCAAAGAA...ACCCAAGTTCAGCATGGCAGAGCTGGCCAACAGCTTGTGGTCCCCGATCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp GTGCAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACGAAAACCTTCGCTGCATaGCAGGAGCAGCCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: VQACETTLAADKNKEPWTKTFAA*QEQPWS
Trigger: ACTCCAGGGCTGCTCCTGTCATGCAGCGAAGGTTTT...CGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp AGGGTGCAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGGCAGGTTGTCGGGGGTaGACACATCCTCATCGTACA +
Preference number: 4 (lower is better)
Translates to: RVQACETTLAADKNKEPWAGCRG*THPHRT
Trigger: TGTACGATGAGGATGTGTGCACCCCCGACAACCTGC...CCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp CATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACGAAGCTTATCGATGGAGGGGACATaGCCCAGGGATGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HARRHWQQTKIKNPGRSLSMEGT*PRDGLQ
Trigger: CTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGA...TAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR TCA 90 bp GCAGACAAAAATAAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACCAGGTTCCCGGGCACTaGCTGTGGCTCCCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ADKNKEPWTKLKRRYREYQVPGH*LWLPPC
Trigger: ACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTG...GTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR TCA 90 bp AGAGCTGGTGGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTCCCCCGTTTATGCTGTaGGTCCCTTCTTCCTGTAAA +
Preference number: 4 (lower is better)
Translates to: RAGGRAQEVLLWLVLIVFPPFML*VPSSCK
Trigger: TTTACAGGAAGAAGGGACTCACAGCATAAACGGGGG...AAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCACCAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp CATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACGAAGCTTATTGAATGCGAGACCCTaGGAAGAGCCCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: HARRHWQQTKIKNPGRSLLNARP*EEPWAG
Trigger: GCCAGCCCAGGGCTCTTCCCAGGGTCTCGCATTCAA...TAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR TCA 90 bp GCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTTGGTGTTGTCCTTCTCTCTaGAGAAGAGCTGTCACCGCA +
Preference number: 4 (lower is better)
Translates to: AQEVLLWLVLIVFGVWPWCCPSL*RRAVTA
Trigger: TGCGGTGACAGCTCTTCTTCAGAGAGAAGGACAACA...CCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp CATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACGAAGCTTAAACTGTCAGCCTTGCTaGCCCAGCTTGCGCACTGGT +
Preference number: 4 (lower is better)
Translates to: HARRHWQQTKIKNPGRSLNCQPC*PSLRTG
Trigger: ACCAGTGCGCAAGCTGGGGCAGCAAGGCTGACAGTT...TAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GCAGACAAAAATAAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACGCCCTGCTCTCTCTTTaGATGGCCCTGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ADKNKEPWTKLKRRYREYALLSL*MALAAG
Trigger: CCCAGCAGCCAGGGCCATGCAAAGAGAGAGCAGGGC...GTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR CCA 90 bp CATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACGAAGCTTAACACCATCAGTCGCATaGCTACTGGCAGGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: HARRHWQQTKIKNPGRSLTPSVA*LLAGGP
Trigger: CGGACCACCTGCCAGTAGCCATGCGACTGATGGTGT...TAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp CATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACGAAGCTTAGCAGGAACAGAGTCTTaGTATGGGCCTCGGGTGACC +
Preference number: 4 (lower is better)
Translates to: HARRHWQQTKIKNPGRSLAGTES*YGPRVT
Trigger: GGTCACCCGAGGCCCATACCAAGACTCTGTTCCTGC...TAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp ATACTAACCCACGGGTTACAAACTCGGTTGTGCTGTAGATTTGTAGAAAATCGTCTGGACCCCAGGACCTaGCTAGGCAGAGGCGACCTT +
Preference number: 4 (lower is better)
Translates to: ILTHGLQTRLCCRFVENRLDPRT*LGRGDL
Trigger: AAGGTCGCCTCTGCCTAGTCAGGTCCTGGGGTCCAG...ACGATTTTCTACAAATCTACAGCACAACCGAGTTTGTAACCCGTGGGTTAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GCAGACAAAAATAAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACGCGAGGGTGCAGGCATaGGAGACGACATTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ADKNKEPWTKLKRRYREYARVQA*ETTLAA
Trigger: TGCTGCCAATGTCGTCTCGCATGCCTGCACCCTCGC...GTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp CATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACGAAGCTTAATTGTAAGAGTGGCCTaGGGCGTGGGGTTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: HARRHWQQTKIKNPGRSLIVRVA*GVGFQG
Trigger: TCCCTGAAACCCCACGCCCCAGGCCACTCTTACAAT...TAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR TCA 90 bp AAAAATAAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACACGAACGATAGGCCACGTCCATaGTGGGGTAGCGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: KNKEPWTKLKRRYREYTNDRPRP*WGSGWQ
Trigger: TTGCCAGCCGCTACCCCATCATGGACGTGGCCTATC...GTTCGTGTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR GCA 90 bp AAAAATAAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACACGAACCCATTGCGGATTCTCTaGCCGATCTCCTTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: KNKEPWTKLKRRYREYTNPLRIL*PISLAR
Trigger: GCGGGCCAAGGAGATCGGGCAGAGAATCCGCAATGG...GTTCGTGTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp ATACTAACCCACGGGTTACAAACTCGGTTGTGCTGTAGATTTGTAGAAAATCGTTCCTCTTGCGGGGCATaGAGGTGTGTGCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: ILTHGLQTRLCCRFVENRSSCGA*RCVQAM
Trigger: CATCGCCTGCACACACCTGCATGCCCCGCAAGAGGA...ACGATTTTCTACAAATCTACAGCACAACCGAGTTTGTAACCCGTGGGTTAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp AAAAATAAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACACGAACCCGAGCTCTTGCTGGTaGGAAACGCCAGGTACTCCC +
Preference number: 4 (lower is better)
Translates to: KNKEPWTKLKRRYREYTNPSSCW*ETPGTP
Trigger: GGGAGTACCTGGCGTTTCCCACCAGCAAGAGCTCGG...GTTCGTGTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp ATACTAACCCACGGGTTACAAACTCGGTTGTGCTGTAGATTTGTAGAAAATCGTCCGAGCTCTTGCTGGTaGGAAACGCCAGGTACTCCC +
Preference number: 4 (lower is better)
Translates to: ILTHGLQTRLCCRFVENRPSSCW*ETPGTP
Trigger: GGGAGTACCTGGCGTTTCCCACCAGCAAGAGCTCGG...ACGATTTTCTACAAATCTACAGCACAACCGAGTTTGTAACCCGTGGGTTAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CCA 90 bp GCAGACAAAAATAAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACTCTCTTAAAGGCAGGTaGGCAGAGGCAGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: ADKNKEPWTKLKRRYREYSLKGR*AEAVLP
Trigger: CGGCAGCACTGCCTCTGCCCACCTGCCTTTAAGAGA...GTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR GCA 90 bp GCAGACAAAAATAAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACGCACAGCCCCTCCTCTaGATGCAGCATGTAGTCGAT +
Preference number: 4 (lower is better)
Translates to: ADKNKEPWTKLKRRYREYAQPLL*MQHVVD
Trigger: ATCGACTACATGCTGCATGCAGAGGAGGGGCTGTGC...GTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR TCA 90 bp AAAAATAAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACACGAACACGATTCTTTGGTCCTaGGGTGTGCTTCCCACCTGC +
Preference number: 4 (lower is better)
Translates to: KNKEPWTKLKRRYREYTNTILWS*GVLPTC
Trigger: GCAGGTGGGAAGCACACCTCAGGACCAAAGAATCGT...GTTCGTGTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR CAA 72 bp CCGGTCCTCATACTAACCCACGGGTTACAAACTCGGTaGTGCTGTAGATTTGTAGAAAATCGTGTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: PVLILTHGLQTR*CCRFVENRVVK
Trigger: TTTCACAACACGATTTTCTACAAATCTACAGCACAACCGAGTTTGTAACCCGTGGGTTAGTATGAGGACCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
3UTR CAA 72 bp TTGTCAAAAACAGTCCCTCAAGTTGAGTCTCGAACTTaGAAACAGACAAAACCTTCGCTGCATGACAGGAGC +
Preference number: 4 (lower is better)
Translates to: LSKTVPQVESRT*KQTKPSLHDRS
Trigger: GCTCCTGTCATGCAGCGAAGGTTTTGTCTGTTTCAAAGTTCGAGACTCAACTTGAGGGACTGTTTTTGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp ATACTAACCCACGGGTTACAAACTCGGTTGTGCTGTAGATTTGTAGAAAATCGTAGATGCCACAGAATCTaGGATCCAGCAATGGTTCAC +
Preference number: 4 (lower is better)
Translates to: ILTHGLQTRLCCRFVENRRCHRI*DPAMVH
Trigger: GTGAACCATTGCTGGATCTCAGATTCTGTGGCATCT...ACGATTTTCTACAAATCTACAGCACAACCGAGTTTGTAACCCGTGGGTTAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR TCA 90 bp GCAGACAAAAATAAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACAAGAGCAAAGTTCTATaGGTGACTTACAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: ADKNKEPWTKLKRRYREYKSKVL*VTYRPC
Trigger: ACAGGGTCTGTAAGTCACTCATAGAACTTTGCTCTT...GTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CCA 90 bp ATACTAACCCACGGGTTACAAACTCGGTTGTGCTGTAGATTTGTAGAAAATCGTAAAAATAAAGAACCCTaGACGAAGCTTAAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ILTHGLQTRLCCRFVENRKNKEP*TKLKRR
Trigger: TCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTT...ACGATTTTCTACAAATCTACAGCACAACCGAGTTTGTAACCCGTGGGTTAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp AGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGCCTGGGCGTCTGGCCCCTaGGGCCCCCGCCAGCTCCGT +
Preference number: 5 (lower is better)
Translates to: SAASRFPGTDCGSLPVPAWASGP*GPRQLR
Trigger: ACGGAGCTGGCGGGGGCCCAAGGGGCCAGACGCCCA...GGCAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGTGGGCGTCTGGCCCCTaGGGCCCCCGCCAGCTCCGT +
Preference number: 5 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWWASGP*GPRQLR
Trigger: ACGGAGCTGGCGGGGGCCCAAGGGGCCAGACGCCCA...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS GCA 90 bp CGCCCTCCTCGCCACCGATGCGCACGATGCAGGCATCCTCCGGGCTaGTGCTGTCGACAGGGTCCCCAGAGGCTGGGCCGTTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: RPPRHRCARCRHPPG*CCRQGPQRLGRWQP
Trigger: AGGCTGCCAACGGCCCAGCCTCTGGGGACCCTGTCGACAGCAGCAGCCCGGAGGATGCCTGCATCGTGCGCATCGGTGGCGAGGAGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 90 bp CGCAGCTCACTGGGCGCCGCAGCCGGCCCTACTACATGGTGTCCGTaGCAGCTGCGGGCACTTTCCTGGGCGAGGGTGGGCGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: RSSLGAAAGPTTWCP*QLRALSWARVGELG
Trigger: CCCCAACTCGCCCACCCTCGCCCAGGAAAGTGCCCGCAGCTGCCACGGACACCATGTAGTAGGGCCGGCTGCGGCGCCCAGTGAGCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000561749.1
CDS CCA 90 bp TCCGTTCCTGGCCTGGCCCCCAGGCACAGGGTCGTCAGCTTCAGGTaGCCGGCCGCCCTCCTCGCCACCGATGCGCACGATGCAGGCATC +
Preference number: 5 (lower is better)
Translates to: SVPGLAPRHRVVSFR*PAALLATDAHDAGI
Trigger: GATGCCTGCATCGTGCGCATCGGTGGCGAGGAGGGCGGCCGGCCACCTGAAGCTGACGACCCTGTGCCTGGGGGCCAGGCCAGGAACGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS-3UTR CAA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCCCAGAGGCTGGGCCGTaGGCAGCCTCGTCACCGGGG +
Preference number: 5 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGPEAGP*AASSPG
Trigger: CCCCGGTGACGAGGCTGCCAACGGCCCAGCCTCTGG...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS GCA 90 bp CCTCCTCGCCACCGATGCGCACGATGCAGGCATCCTCCGGGCTGCTaGTGTCGACAGGGTCCCCAGAGGCTGGGCCGTTGGCAGCCTCGT +
Preference number: 5 (lower is better)
Translates to: PPRHRCARCRHPPGC*CRQGPQRLGRWQPR
Trigger: ACGAGGCTGCCAACGGCCCAGCCTCTGGGGACCCTGTCGACAGCAGCAGCCCGGAGGATGCCTGCATCGTGCGCATCGGTGGCGAGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS GCA 90 bp GCGGGGAAGAAGGCGGAGACCTCATGGTCGAAGGCCTCGTCGGGGTaGCGCCTCCTGCGTGCAGCCGCCTTCTTCACCACCGAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: AGKKAETSWSKASSG*RLLRAAAFFTTEAL
Trigger: CAAGGCCTCGGTGGTGAAGAAGGCGGCTGCACGCAGGAGGCGGCACCCCGACGAGGCCTTCGACCATGAGGTCTCCGCCTTCTTCCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 90 bp CTACATGGTGTCCGTGGCAGCTGCGGGCACTTTCCTGGGCGAGGGTaGGCGAGTTGGGGGCAGCTGGAGGAGGGGTCACCTCCTGGCGAG +
Preference number: 5 (lower is better)
Translates to: LHGVRGSCGHFPGRG*ASWGQLEEGSPPGE
Trigger: CTCGCCAGGAGGTGACCCCTCCTCCAGCTGCCCCCAACTCGCCCACCCTCGCCCAGGAAAGTGCCCGCAGCTGCCACGGACACCATGTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000561749.1
CDS CCA 90 bp AGGCACAGGAAGTCCAGGTTGGCGGGGAAGAAGGCGGAGACCTCATaGTCGAAGGCCTCGTCGGGGTGCCGCCTCCTGCGTGCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: RHRKSRLAGKKAETS*SKASSGCRLLRAAA
Trigger: GGCGGCTGCACGCAGGAGGCGGCACCCCGACGAGGCCTTCGACCATGAGGTCTCCGCCTTCTTCCCCGCCAACCTGGACTTCCTGTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS-3UTR CAA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGGCCGGGCGGCCCCATaGCGGATTCTCTGCCCGATC +
Preference number: 5 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQGRAAP*RILCPI
Trigger: GATCGGGCAGAGAATCCGCAATGGGGCCGCCCGGCC...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS TCA 90 bp AATGCTCCCGGGGACGGCCCGGGCCACCCCATCGCCGCCCTGTGGTaGCACCAGGCTGCTGAAGCTAGCGGCGCTGATGGAGGTATTGGT +
Preference number: 5 (lower is better)
Translates to: NAPGDGPGHPIAALW*HQAAEASGADGGIG
Trigger: ACCAATACCTCCATCAGCGCCGCTAGCTTCAGCAGCCTGGTGTCACCACAGGGCGGCGATGGGGTGGCCCGGGCCGTCCCCGGGAGCATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 90 bp CCTTGTACAGGAGCTTGCTGTTGGCACCTGGCTCCCCGCTGGCACTaGTGTCTGGCCCAGCTCGCCCCTTCACCAGGGACTCCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: PCTGACCWHLAPRWH*CLAQLAPSPGTPGR
Trigger: CCTCCCGGGAGTCCCTGGTGAAGGGGCGAGCTGGGCCAGACACCAGTGCCAGCGGGGAGCCAGGTGCCAACAGCAAGCTCCTGTACAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 90 bp TCGATGCGCCGGCCGTTGCCCTTCAGCAGCTCCTTCCGCCCCTTCTaGCCCGAGCTCTTGCTGGTGGGAAACGCCAGGTACTCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: SMRRPLPFSSSFRPF*PELLLVGNARYSLR
Trigger: CCGCAGGGAGTACCTGGCGTTTCCCACCAGCAAGAGCTCGGGCCAGAAGGGGCGGAAGGAGCTGCTGAAGGGCAACGGCCGGCGCATCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000574662.1
CDS-3UTR CAA 90 bp CCTGTCCCTGCCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCGATGGCGCTGTCCTCTaGCGGGGCATGCAGGTGTGT +
Preference number: 5 (lower is better)
Translates to: PVPALLPQAPGTRWRGHGDGAVL*RGMQVC
Trigger: ACACACCTGCATGCCCCGCAAGAGGACAGCGCCATC...GCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGGCAGGGACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp TGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCAGAGCCAGGACCTTCTGCAGGTaGTCGGGGGTGCACACATCC +
Preference number: 5 (lower is better)
Translates to: WLHCPDGRLPEEAQGARARTFCR*SGVHTS
Trigger: GGATGTGTGCACCCCCGACAACCTGCAGAAGGTCCT...GGCTCTGGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCTCGATGCGCCGGCCGTaGCCCTTCAGCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCSMRRP*PFSSSF
Trigger: GAAGGAGCTGCTGAAGGGCAACGGCCGGCGCATCGA...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCTCGATGCGCCGGCCGTaGCCCTTCAGCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGSMRRP*PFSSSF
Trigger: GAAGGAGCTGCTGAAGGGCAACGGCCGGCGCATCGA...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CAA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGTCGATGCGCCGGCCGTaGCCCTTCAGCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWSMRRP*PFSSSF
Trigger: GAAGGAGCTGCTGAAGGGCAACGGCCGGCGCATCGA...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CAA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCGGCCGGCCCAGTCGCTaGTGTGAGCAGAGTACCAGC +
Preference number: 5 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCGRPSR*CEQSTS
Trigger: GCTGGTACTCTGCTCACACAAGCGACTGGGCCGGCC...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp CCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGAGTGGCCCCCGCGCCTaGTGGCTTCCTTTGAGACTG +
Preference number: 5 (lower is better)
Translates to: PSSPKHRALDGGDMAQGWSGPRA*WLPLRL
Trigger: CAGTCTCAAAGGAAGCCACAAGGCGCGGGGGCCACT...CCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS TCA 90 bp ACTGAGCAGGGCTGCCCCACCGGCCAGGCCCTTGTCTTCCAGCCGTaGATAGATGTAGGGCCGGCGGGCCGACTGCAGTGGGGACCAGAA +
Preference number: 5 (lower is better)
Translates to: TEQGCPTGQALVFQP*IDVGPAGRLQWGPE
Trigger: TTCTGGTCCCCACTGCAGTCGGCCCGCCGGCCCTACATCTATTCACGGCTGGAAGACAAGGGCCTGGCCGGTGGGGCAGCCCTGCTCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS GCA 90 bp ACAGGGTCCCCAGAGGCTGGGCCGTTGGCAGCCTCGTCACCGGGGTaGCGCCCACCGTCACCCTTGTACTCCACAGAGGCTGTCCTCTTA +
Preference number: 5 (lower is better)
Translates to: TGSPEAGPLAASSPG*RPPSPLYSTEAVLL
Trigger: TAAGAGGACAGCCTCTGTGGAGTACAAGGGTGACGGTGGGCGGCACCCCGGTGACGAGGCTGCCAACGGCCCAGCCTCTGGGGACCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS GCA 90 bp AGGCGGAGACCTCATGGTCGAAGGCCTCGTCGGGGTGCCGCCTCCTaGGTGCAGCCGCCTTCTTCACCACCGAGGCCTTGTACAGGAGCT +
Preference number: 5 (lower is better)
Translates to: RRRPHGRRPRRGAAS*VQPPSSPPRPCTGA
Trigger: AGCTCCTGTACAAGGCCTCGGTGGTGAAGAAGGCGGCTGCACGCAGGAGGCGGCACCCCGACGAGGCCTTCGACCATGAGGTCTCCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS GCA 90 bp GCCCTGCACGACAAGAACCCACTGGCCGGAGGAGTGACGAGGTCCTaGTCCCTCCCGCCCCGCTTCTCCCTCCTCATCTGCCGTGTGATC +
Preference number: 5 (lower is better)
Translates to: ALHDKNPLAGGVTRS*SLPPRFSLLICRVI
Trigger: GATCACACGGCAGATGAGGAGGGAGAAGCGGGGCGGGAGGGAGCAGGACCTCGTCACTCCTCCGGCCAGTGGGTTCTTGTCGTGCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CCA 90 bp GCGAGGGTGGGCGAGTTGGGGGCAGCTGGAGGAGGGGTCACCTCCTaGCGAGATGCAACTCCGGCTGGTCAATGGCGAATGTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: ARVGELGAAGGGVTS*RDATPAGQWRMLAS
Trigger: GCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATCTCGCCAGGAGGTGACCCCTCCTCCAGCTGCCCCCAACTCGCCCACCCTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000561749.1
CDS CCA 90 bp CAGCCGCCTTCTTCACCACCGAGGCCTTGTACAGGAGCTTGCTGTTaGCACCTGGCTCCCCGCTGGCACTGGTGTCTGGCCCAGCTCGCC +
Preference number: 5 (lower is better)
Translates to: QPPSSPPRPCTGACC*HLAPRWHWCLAQLA
Trigger: GGCGAGCTGGGCCAGACACCAGTGCCAGCGGGGAGCCAGGTGCCAACAGCAAGCTCCTGTACAAGGCCTCGGTGGTGAAGAAGGCGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 90 bp GCTGTGTCCCGGACAGGGTTGGACACTCGCAGGGAGGCCTCAGACTaGGCCCTGCACGACAAGAACCCACTGGCCGGAGGAGTGACGAGG +
Preference number: 5 (lower is better)
Translates to: AVSRTGLDTRREASD*ALHDKNPLAGGVTR
Trigger: CCTCGTCACTCCTCCGGCCAGTGGGTTCTTGTCGTGCAGGGCCCAGTCTGAGGCCTCCCTGCGAGTGTCCAACCCTGTCCGGGACACAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CCA 90 bp CTGGTCAATGGCGAATGTTGGCCAGCCGGTCATGGTTCACCTCGGTaGGCCATGCGGAGGCCTACTGCAGACCCTCTGACGGCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: LVNGECWPAGHGSPR*AMRRPTADPLTAGG
Trigger: CCCGCCCGCCGTCAGAGGGTCTGCAGTAGGCCTCCGCATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561749.1
CDS-3UTR CAA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCTCTGCCCGATCTCCTaGGCCCGCGCTTGGGTGTTA +
Preference number: 5 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWLCPIS*ARAWVL
Trigger: TAACACCCAAGCGCGGGCCAAGGAGATCGGGCAGAG...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CAA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCCGCCCACCGTCACCCTaGTACTCCACAGAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGRPPSP*YSTEAV
Trigger: GACAGCCTCTGTGGAGTACAAGGGTGACGGTGGGCG...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CAA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCTACAGGAGCTTGCTGTaGGCACCTGGCTCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCYRSLL*APGSPL
Trigger: CAGCGGGGAGCCAGGTGCCAACAGCAAGCTCCTGTA...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGTACAGGAGCTTGCTGTaGGCACCTGGCTCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWYRSLL*APGSPL
Trigger: CAGCGGGGAGCCAGGTGCCAACAGCAAGCTCCTGTA...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CAA 90 bp GCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGGATGGCGCTGTCCTCTaGCGGGGCATGCAGGTGTGT +
Preference number: 5 (lower is better)
Translates to: AAQLPGSRALTVAPSLSLDGAVL*RGMQVC
Trigger: ACACACCTGCATGCCCCGCAAGAGGACAGCGCCATC...CAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGGATGGCGCTGTCCTCTaGCGGGGCATGCAGGTGTGT +
Preference number: 5 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWDGAVL*RGMQVC
Trigger: ACACACCTGCATGCCCCGCAAGAGGACAGCGCCATC...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CAA 90 bp TGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCAGAGCCGGTGAACAGGGAGTGTaGCTGCTCCAGCTTGTCGTC +
Preference number: 5 (lower is better)
Translates to: WLHCPDGRLPEEAQGARAGEQGV*LLQLVV
Trigger: GACGACAAGCTGGAGCAGCAACACTCCCTGTTCACC...GGCTCTGGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp GCGGCTGTCGAGAGCTGCAGGGCCCGGGCCCTGCTCTCTCTTTGCATGGCCCTGAGGACCTTCTGCAGGTaGTCGGGGGTGCACACATCC +
Preference number: 5 (lower is better)
Translates to: AAVESCRARALLSLCMALRTFCR*SGVHTS
Trigger: GGATGTGTGCACCCCCGACAACCTGCAGAAGGTCCT...CAGGGCCATGCAAAGAGAGAGCAGGGCCCGGGCCCTGCAGCTCTCGACAGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR CAA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCTTCTGGCCCGAGCTCTaGCTGGTGGGAAACGCCAGG +
Preference number: 5 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGFWPEL*LVGNAR
Trigger: CCTGGCGTTTCCCACCAGCAAGAGCTCGGGCCAGAA...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS GCA 90 bp GGGCGAGTTGGGGGCAGCTGGAGGAGGGGTCACCTCCTGGCGAGATaGAACTCCGGCTGGTCAATGGCGAATGTTGGCCAGCCGGTCATG +
Preference number: 5 (lower is better)
Translates to: GRVGGSWRRGHLLAR*NSGWSMANVGQPVM
Trigger: CATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATCTCGCCAGGAGGTGACCCCTCCTCCAGCTGCCCCCAACTCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000561749.1
CDS GCA 90 bp TGCGTGCAGCCGCCTTCTTCACCACCGAGGCCTTGTACAGGAGCTTaGTGTTGGCACCTGGCTCCCCGCTGGCACTGGTGTCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: CVQPPSSPPRPCTGA*CWHLAPRWHWCLAQ
Trigger: CTGGGCCAGACACCAGTGCCAGCGGGGAGCCAGGTGCCAACAGCAAGCTCCTGTACAAGGCCTCGGTGGTGAAGAAGGCGGCTGCACGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS GCA 90 bp GGAGACCTCATGGTCGAAGGCCTCGTCGGGGTGCCGCCTCCTGCGTaGAGCCGCCTTCTTCACCACCGAGGCCTTGTACAGGAGCTTGCT +
Preference number: 5 (lower is better)
Translates to: GDLMVEGLVGVPPPA*SRLLHHRGLVQELA
Trigger: AGCAAGCTCCTGTACAAGGCCTCGGTGGTGAAGAAGGCGGCTGCACGCAGGAGGCGGCACCCCGACGAGGCCTTCGACCATGAGGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS GCA 90 bp CCTTCTGGCCCGAGCTCTTGCTGGTGGGAAACGCCAGGTACTCCCTaGGGCCCTCCTCACTCTCCAGGACCTTCTGCAGGTTGTCGGGGG +
Preference number: 5 (lower is better)
Translates to: PSGPSSCWWETPGTP*GPPHSPGPSAGCRG
Trigger: CCCCCGACAACCTGCAGAAGGTCCTGGAGAGTGAGGAGGGCCGCAGGGAGTACCTGGCGTTTCCCACCAGCAAGAGCTCGGGCCAGAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000574662.1
CDS GCA 90 bp CGTTGCCCTTCAGCAGCTCCTTCCGCCCCTTCTGGCCCGAGCTCTTaGTGGTGGGAAACGCCAGGTACTCCCTGCGGCCCTCCTCACTCT +
Preference number: 5 (lower is better)
Translates to: RCPSAAPSAPSGPSS*WWETPGTPCGPPHS
Trigger: AGAGTGAGGAGGGCCGCAGGGAGTACCTGGCGTTTCCCACCAGCAAGAGCTCGGGCCAGAAGGGGCGGAAGGAGCTGCTGAAGGGCAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000574662.1
CDS GCA 90 bp ACAGCCCCTCCTCTGCATGCAGCATGTAGTCGATGCGCCGGCCGTTaGCCTTCAGCAGCTCCTTCCGCCCCTTCTGGCCCGAGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: TAPPLHAACSRCAGR*PSAAPSAPSGPSSC
Trigger: GCAAGAGCTCGGGCCAGAAGGGGCGGAAGGAGCTGCTGAAGGGCAACGGCCGGCGCATCGACTACATGCTGCATGCAGAGGAGGGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000574662.1
CDS GCA 90 bp TCCAGTCTGGGCACAGCCCCTCCTCTGCATGCAGCATGTAGTCGATaGGCCGGCCGTTGCCCTTCAGCAGCTCCTTCCGCCCCTTCTGGC +
Preference number: 5 (lower is better)
Translates to: SSLGTAPPLHAACSR*AGRCPSAAPSAPSG
Trigger: GCCAGAAGGGGCGGAAGGAGCTGCTGAAGGGCAACGGCCGGCGCATCGACTACATGCTGCATGCAGAGGAGGGGCTGTGCCCAGACTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000563396.1
ENST00000568373.5
ENST00000574662.1
CDS GCA 90 bp GCCCTCCTGACTCACGGCCTTCCAGTCTGGGCACAGCCCCTCCTCTaGATGCAGCATGTAGTCGATGCGCCGGCCGTTGCCCTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: ALLTHGLPVWAQPLL*MQHVVDAPAVALQQ
Trigger: CTGCTGAAGGGCAACGGCCGGCGCATCGACTACATGCTGCATGCAGAGGAGGGGCTGTGCCCAGACTGGAAGGCCGTGAGTCAGGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563396.1
ENST00000574662.1
CDS CCA 90 bp CCTTCAGCAGCTCCTTCCGCCCCTTCTGGCCCGAGCTCTTGCTGGTaGGAAACGCCAGGTACTCCCTGCGGCCCTCCTCACTCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: PSAAPSAPSGPSSCW*ETPGTPCGPPHSPG
Trigger: TCCTGGAGAGTGAGGAGGGCCGCAGGGAGTACCTGGCGTTTCCCACCAGCAAGAGCTCGGGCCAGAAGGGGCGGAAGGAGCTGCTGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000574662.1
CDS CCA 90 bp TGCCCTTCAGCAGCTCCTTCCGCCCCTTCTGGCCCGAGCTCTTGCTaGTGGGAAACGCCAGGTACTCCCTGCGGCCCTCCTCACTCTCCA +
Preference number: 5 (lower is better)
Translates to: CPSAAPSAPSGPSSC*WETPGTPCGPPHSP
Trigger: TGGAGAGTGAGGAGGGCCGCAGGGAGTACCTGGCGTTTCCCACCAGCAAGAGCTCGGGCCAGAAGGGGCGGAAGGAGCTGCTGAAGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000574662.1
CDS CCA 90 bp CCAACACTTGGTGTCACCTGCCCCGCGCTGTGTCCCGGACAGGGTTaGACACTCGCAGGGAGGCCTCAGACTGGGCCCTGCACGACAAGA +
Preference number: 5 (lower is better)
Translates to: PTLGVTCPALCPGQG*TLAGRPQTGPCTTR
Trigger: TCTTGTCGTGCAGGGCCCAGTCTGAGGCCTCCCTGCGAGTGTCCAACCCTGTCCGGGACACAGCGCGGGGCAGGTGACACCAAGTGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS-3UTR CAA 90 bp GCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGGGCAGGAGGCAGACGTaGGCAGTGGCAAAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: AAQLPGSRALTVAPSLSLGRRQT*AVAKQK
Trigger: CTTCTGCTTTGCCACTGCCAACGTCTGCCTCCTGCC...CAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGGCAGGAGGCAGACGTaGGCAGTGGCAAAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGGRRQT*AVAKQK
Trigger: CTTCTGCTTTGCCACTGCCAACGTCTGCCTCCTGCC...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CAA 90 bp GATCCCCGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGCTCTGCCCGATCTCCTaGGCCCGCGCTTGGGTGTTA +
Preference number: 5 (lower is better)
Translates to: DPRLWLHCPDGRLPEEAQLCPIS*ARAWVL
Trigger: TAACACCCAAGCGCGGGCCAAGGAGATCGGGCAGAG...CTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp AGCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTCGCCCACCGTCACCCTaGTACTCCACAGAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: SSAASRFPGTDCGSLPVPRPPSP*YSTEAV
Trigger: GACAGCCTCTGTGGAGTACAAGGGTGACGGTGGGCG...AGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp AGGCAGATCGGGGACCACAAGCTGTTGGCCAGCTCTGCCATGCTGAACTTGGGTCCAGAGGCTGGGCCGTaGGCAGCCTCGTCACCGGGG +
Preference number: 5 (lower is better)
Translates to: RQIGDHKLLASSAMLNLGPEAGP*AASSPG
Trigger: CCCCGGTGACGAGGCTGCCAACGGCCCAGCCTCTGG...ACCCAAGTTCAGCATGGCAGAGCTGGCCAACAGCTTGTGGTCCCCGATCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGGCCTTGTACAGGAGCTaGCTGTTGGCACCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWALYRS*LLAPGS
Trigger: GGAGCCAGGTGCCAACAGCAAGCTCCTGTACAAGGC...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CAA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGCCTTGTACAGGAGCTaGCTGTTGGCACCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGALYRS*LLAPGS
Trigger: GGAGCCAGGTGCCAACAGCAAGCTCCTGTACAAGGC...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CAA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGCACAGGAAGTCCAGGTaGGCGGGGAAGAAGGCGGAG +
Preference number: 5 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQHRKSR*AGKKAE
Trigger: CTCCGCCTTCTTCCCCGCCAACCTGGACTTCCTGTG...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CAA 90 bp CTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCGGTGAACAGGGAGTGTaGCTGCTCCAGCTTGTCGTC +
Preference number: 5 (lower is better)
Translates to: LLPQAPGTRWRGHGPGMGGEQGV*LLQLVV
Trigger: GACGACAAGCTGGAGCAGCAACACTCCCTGTTCACC...GCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp AGCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTCTGCGTGGCCCCCTCTaGGTCCCTCTTGCAGCTCAA +
Preference number: 5 (lower is better)
Translates to: SSAASRFPGTDCGSLPVPLRGPL*VPLAAQ
Trigger: TTGAGCTGCAAGAGGGACCAAGAGGGGGCCACGCAG...AGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCGGCAGGAACAGAGTCTaGGTATGGGCCTCGGGTGAC +
Preference number: 5 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCGRNRV*VWASGD
Trigger: GTCACCCGAGGCCCATACCAAGACTCTGTTCCTGCC...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS GCA 90 bp ACAGCCCCTCCTCTGCATGCAGCATGTAGTCGATGCGCCGGCCGTTaGCCTTCAGCAGCTCCTTCCGCCCCTTCTGGCCCGAGCTCTTGT +
Preference number: 5 (lower is better)
Translates to: TAPPLHAACSRCAGR*PSAAPSAPSGPSSC
Trigger: ACAAGAGCTCGGGCCAGAAGGGGCGGAAGGAGCTGCTGAAGGGCAACGGCCGGCGCATCGACTACATGCTGCATGCAGAGGAGGGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563396.1
ENST00000568373.5
CDS CCA 90 bp CTGGTCAATGGCGAATGTTGGCCAGCCGGTCATGGTTCACCTCGGTaGGCCATGCGGAGGCCTACTGCAGACCCTGAGGAGGGGCCACTG +
Preference number: 5 (lower is better)
Translates to: LVNGECWPAGHGSPR*AMRRPTADPEEGPL
Trigger: CAGTGGCCCCTCCTCAGGGTCTGCAGTAGGCCTCCGCATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS CCA 90 bp CTTCTTCACCACCGAGGCCTTGTACAGGAGCTTGCTGTTGGCACCTaGCTCCCCGCTGGCACTGGTGTCTGGCCCAGCTCGCCCCTTCAC +
Preference number: 5 (lower is better)
Translates to: LLHHRGLVQELAVGT*LPAGTGVWPSSPLH
Trigger: GTGAAGGGGCGAGCTGGGCCAGACACCAGTGCCAGCGGGGAGCCAGGTGCCAACAGCAAGCTCCTGTACAAGGCCTCGGTGGTGAAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 90 bp CCTCCTCCTGGCGAGATGCAACTCCGGCTGGTCAATGGCGAATGTTaGCCAGCCGGTCATGGTTCACCTCGGTGGGCCATGCGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: PPPGEMQLRLVNGEC*PAGHGSPRWAMRRP
Trigger: AGGCCTCCGCATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATCTCGCCAGGAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566723.1
CDS-3UTR CAA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGGGGCCACTGGGACCTaGTTGTCCTTCTCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGGATGT*LSFSLK
Trigger: CTTCAGAGAGAAGGACAACAAGGTCCCAGTGGCCCC...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGAGCAAAGCAGAAGCTTTaGCCAGGCCCCGTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRAKQKL*PGPVPF
Trigger: GAAGGGCACGGGGCCTGGCAAAAGCTTCTGCTTTGC...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CAA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCTTGGTGGCTGCTCGCTaGTCAAACACCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGLVAAR*SNTSCR
Trigger: CCTGCAGGAGGTGTTTGACAAGCGAGCAGCCACCAA...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CAA 90 bp CCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCAAGAGGAGGCCGCTGTaGAGACACTTGAAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PQAPGTRWRGHGPGMGCSKRRPL*RHLKLQ
Trigger: CTGCAGCTTCAAGTGTCTCAACAGCGGCCTCCTCTT...GCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp CTGCAGCTGCAAGGGCTGGCAGAGGCCCCGCTGCTCCGGACGGTCTATGCCTCCAAGAGGAGGCCGCTGTaGAGACACTTGAAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LQLQGLAEAPLLRTVYASKRRPL*RHLKLQ
Trigger: CTGCAGCTTCAAGTGTCTCAACAGCGGCCTCCTCTT...GGAGGCATAGACCGTCCGGAGCAGCGGGGCCTCTGCCAGCCCTTGCAGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574662.1
CDS-3UTR CAA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGGTGAACAGGGAGTGTaGCTGCTCCAGCTTGTCGTC +
Preference number: 5 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGGEQGV*LLQLVV
Trigger: GACGACAAGCTGGAGCAGCAACACTCCCTGTTCACC...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CAA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCCTCTTGTTCTGCAGGTaGTCGGGGGTGCACACATCC +
Preference number: 5 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGLLFCR*SGVHTS
Trigger: GGATGTGTGCACCCCCGACAACCTGCAGAACAAGAG...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568373.5
CDS TCA 90 bp AGCACGGGTCGTCTGCCCGCTGGCGCTTCTCGTAGGTGGTGGGTATaGAGGAGGCAGCGAGCCGGTCCACCAGCCAGTAGCATGGAAAGA +
Preference number: 5 (lower is better)
Translates to: STGRLPAGASRRWWV*RRQRAGPPASSMER
Trigger: TCTTTCCATGCTACTGGCTGGTGGACCGGCTCGCTGCCTCCTTCATACCCACCACCTACGAGAAGCGCCAGCGGGCAGACGACCCGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219334.10
ENST00000561749.1
ENST00000563226.1
ENST00000568373.5
CDS TCA 90 bp GCTTCTCCTCACCAGGCCCCAGGCGGCAGGGGTCCCTGTAGTGGGTaGACAGGGAGTGTTGCTGCTCCAGCTTGTCGTCAGAGGAGCAGT +
Preference number: 5 (lower is better)
Translates to: ASPHQAPGGRGPCSG*TGSVAAPACRQRSS
Trigger: ACTGCTCCTCTGACGACAAGCTGGAGCAGCAACACTCCCTGTTCACCCACTACAGGGACCCCTGCCGCCTGGGGCCTGGTGAGGAGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219334.10
ENST00000567223.6
ENST00000568373.5
ENST00000574662.1
CDS TCA 90 bp CCAGCAGAGTACCAGGCCCCAGGCGGCAGGGGTCCCTGTAGTGGGTaGACAGGGAGTGTTGCTGCTCCAGCTTGTCGTCAGAGGAGCAGT +
Preference number: 5 (lower is better)
Translates to: PAEYQAPGGRGPCSG*TGSVAAPACRQRSS
Trigger: ACTGCTCCTCTGACGACAAGCTGGAGCAGCAACACTCCCTGTTCACCCACTACAGGGACCCCTGCCGCCTGGGGCCTGGTACTCTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563226.1
CDS CCA 90 bp TCACCTCCTGGCGAGATGCAACTCCGGCTGGTCAATGGCGAATGTTaGCCAGCCGGTCATGGTTCACCTCGGTGGGCCATGCGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: SPPGEMQLRLVNGEC*PAGHGSPRWAMRRP
Trigger: AGGCCTCCGCATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATCTCGCCAGGAGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000561749.1
CDS CCA 90 bp GGAGGAGGGGTCACCTCCTGGCGAGATGCAACTCCGGCTGGTCAATaGCGAATGTTGGCCAGCCGGTCATGGTTCACCTCGGTGGGCCAT +
Preference number: 5 (lower is better)
Translates to: GGGVTSWRDATPAGQ*RMLASRSWFTSVGH
Trigger: ATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATCTCGCCAGGAGGTGACCCCTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000561749.1
CDS CCA 90 bp GGCAGCTGGAGGAGGGGTCACCTCCTGGCGAGATGCAACTCCGGCTaGTCAATGGCGAATGTTGGCCAGCCGGTCATGGTTCACCTCGGT +
Preference number: 5 (lower is better)
Translates to: GSWRRGHLLARCNSG*SMANVGQPVMVHLG
Trigger: ACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATCTCGCCAGGAGGTGACCCCTCCTCCAGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000561749.1
CDS-3UTR CAA 90 bp GGATACTCTCTTCTCGGATCCCCGTTTATGGCTCCACTGCCCAGATGGGAGGCTGGCCGGGCGGCCCCATaGCGGATTCTCTGCCCGATC +
Preference number: 5 (lower is better)
Translates to: GYSLLGSPFMAPLPRWEAGRAAP*RILCPI
Trigger: GATCGGGCAGAGAATCCGCAATGGGGCCGCCCGGCC...AGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATCCGAGAAGAGAGTATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCTTCACCACCGAGGCCTaGTACAGGAGCTTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCFTTEA*YRSLLL
Trigger: CAACAGCAAGCTCCTGTACAAGGCCTCGGTGGTGAA...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp AGCGTGGCACGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGAGTACCCGACGATTCTTaGGTCCTGAGGTGTGCTTCC +
Preference number: 5 (lower is better)
Translates to: SVARGMRAACMRGCRHARVPDDS*VLRCAS
Trigger: GGAAGCACACCTCAGGACCAAAGAATCGTCGGGTAC...TCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACGTGCCACGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCGATTGTGTTTGGAGTTaGGCCTTGGGTGAGGCCCGA +
Preference number: 5 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCDCVWS*ALGEAR
Trigger: TCGGGCCTCACCCAAGGCCAAACTCCAAACACAATC...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp GCAGCTCAATGGGTGACAAGGCACAGCATCAGGGCACCAGCACCAGGAGGGGCTGGTCCCCTTGTGGCCTaGGTGTTGGCTGGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: AAQWVTRHSIRAPAPGGAGPLVA*VLAGVA
Trigger: AGCTACCCCAGCCAACACCAAGGCCACAAGGGGACC...AGCCCCTCCTGGTGCTGGTGCCCTGATGCTGTGCCTTGTCACCCATTGAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS GCA 90 bp GAATTCTTCCACCTCGGCCTTCCAGTCTGGGCACAGCCCCTCCTCTaGATGCAGCATGTAGTCGATGCGCCGGCCGTTGCCCTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: EFFHLGLPVWAQPLL*MQHVVDAPAVALQQ
Trigger: CTGCTGAAGGGCAACGGCCGGCGCATCGACTACATGCTGCATGCAGAGGAGGGGCTGTGCCCAGACTGGAAGGCCGAGGTGGAAGAATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS GCA 90 bp GTCTTAAGGCGTCAGCCTCTCACTCATCCAACACTTGGTGTCACCTaGCCCGCGCTGTGTCCCGGACAGGGTTGGACACTCGCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: VLRRQPLTHPTLGVT*PALCPGQGWTLAGR
Trigger: CCTCCCTGCGAGTGTCCAACCCTGTCCGGGACACAGCGCGGGGCAGGTGACACCAAGTGTTGGATGAGTGAGAGGCTGACGCCTTAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CCA 90 bp CAGCTGTTAGGAAAGGGGGTCGTGTACAAAACCATCGCAGCTCACTaGGCGCCGCAGCCGGCCCTACTACATGGTGTCCGTGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QLLGKGVVYKTIAAH*APQPALLHGVRGSC
Trigger: GCAGCTGCCACGGACACCATGTAGTAGGGCCGGCTGCGGCGCCCAGTGAGCTGCGATGGTTTTGTACACGACCCCCTTTCCTAACAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219334.10
ENST00000561749.1
ENST00000563226.1
ENST00000568373.5
CDS CCA 90 bp GCGGCCCCATTGCGGATTCTCTGCCCGATCTCCTTGGCCCGCGCTTaGGTGTTAAAAAGGTTGTTGACCCTGGCGAGTGAGTCGGGCAGG +
Preference number: 5 (lower is better)
Translates to: AAPLRILCPISLARA*VLKRLLTLASESGR
Trigger: CCTGCCCGACTCACTCGCCAGGGTCAACAACCTTTTTAACACCCAAGCGCGGGCCAAGGAGATCGGGCAGAGAATCCGCAATGGGGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 90 bp GATGCAACTCCGGCTGGTCAATGGCGAATGTTGGCCAGCCGGTCATaGTTCACCTCGGTGGGCCATGCGGAGGCCTACTGCAGACCCTCT +
Preference number: 5 (lower is better)
Translates to: DATPAGQWRMLASRS*FTSVGHAEAYCRPS
Trigger: AGAGGGTCTGCAGTAGGCCTCCGCATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561749.1
CDS CCA 90 bp GATGCAACTCCGGCTGGTCAATGGCGAATGTTGGCCAGCCGGTCATaGTTCACCTCGGTGGGCCATGCGGAGGCCTACTGCAGACCCTGT +
Preference number: 5 (lower is better)
Translates to: DATPAGQWRMLASRS*FTSVGHAEAYCRPC
Trigger: ACAGGGTCTGCAGTAGGCCTCCGCATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566723.1
CDS-3UTR CAA 90 bp GCAGCTCAATGGGTGACAAGGCACAGCATCAGGGCACCAGCACCAGGAGGGGCTGCAAAGCAGAAGCTTTaGCCAGGCCCCGTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: AAQWVTRHSIRAPAPGGAAKQKL*PGPVPF
Trigger: GAAGGGCACGGGGCCTGGCAAAAGCTTCTGCTTTGC...AGCCCCTCCTGGTGCTGGTGCCCTGATGCTGTGCCTTGTCACCCATTGAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCTCCTTGGCCCGCGCTaGGGTGTTAAAAAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWLLGPR*GVKKVV
Trigger: AACAACCTTTTTAACACCCAAGCGCGGGCCAAGGAG...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CAA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGATTCACCACCGAGGCCTaGTACAGGAGCTTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRFTTEA*YRSLLL
Trigger: CAACAGCAAGCTCCTGTACAAGGCCTCGGTGGTGAA...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CAA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAAAGAGGAGGCCGCTGTaGAGACACTTGAAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAKRRPL*RHLKLQ
Trigger: CTGCAGCTTCAAGTGTCTCAACAGCGGCCTCCTCTT...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CAA 90 bp AGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTGCCCTTCCCACCTGCACCTaGAGAAACAGAGCTCCCTTA +
Preference number: 5 (lower is better)
Translates to: SAASRFPGTDCGSLPVPALPTCT*RNRAPL
Trigger: TAAGGGAGCTCTGTTTCTCAAGGTGCAGGTGGGAAG...GGCAGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGGTACCCGACGATTCTTaGGTCCTGAGGTGTGCTTCC +
Preference number: 5 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQVPDDS*VLRCAS
Trigger: GGAAGCACACCTCAGGACCAAAGAATCGTCGGGTAC...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CAA 90 bp CGTGGCATGCGGGCAGCGTGCATGCGAGGGTGCAGGCATGCGAGACGACATTGGGATTGTGTTTGGAGTTaGGCCTTGGGTGAGGCCCGA +
Preference number: 5 (lower is better)
Translates to: RGMRAACMRGCRHARRHWDCVWS*ALGEAR
Trigger: TCGGGCCTCACCCAAGGCCAAACTCCAAACACAATC...CCAATGTCGTCTCGCATGCCTGCACCCTCGCATGCACGCTGCCCGCATGCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp CGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGGGTGCCGGAGGTCAGCGGGGATaGTCAAAAACAGTCCCTCAA +
Preference number: 5 (lower is better)
Translates to: RLWLHCPDGRLPEEAQGAGGQRG*SKTVPQ
Trigger: TTGAGGGACTGTTTTTGACAATCCCCGCTGACCTCC...GGCACCCTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS TCA 90 bp GCGCTGGACGAGGAGGTAGATTTTCGGAAATCAGCCAGCCAGTCCTaGAGCAGGTCCAGCTGCCCACACCGGATGGCGCTGTCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: ALDEEVDFRKSASQS*SRSSCPHRMALSSC
Trigger: GCAAGAGGACAGCGCCATCCGGTGTGGGCAGCTGGACCTGCTTCAGGACTGGCTGGCTGATTTCCGAAAATCTACCTCCTCGTCCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000566009.5
ENST00000567223.6
ENST00000567811.1
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CAA 90 bp GCAGCTCAATGGGTGACAAGGCACAGCATCAGGGCACCAGCACCAGGAGGGGCTGGTCAATGGCGAATGTaGGCCAGCCGGTCATGGTTC +
Preference number: 5 (lower is better)
Translates to: AAQWVTRHSIRAPAPGGAGQWRM*ASRSWF
Trigger: GAACCATGACCGGCTGGCCAACATTCGCCATTGACC...AGCCCCTCCTGGTGCTGGTGCCCTGATGCTGTGCCTTGTCACCCATTGAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp GATCCCCGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGCTCCTTGGCCCGCGCTaGGGTGTTAAAAAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: DPRLWLHCPDGRLPEEAQLLGPR*GVKKVV
Trigger: AACAACCTTTTTAACACCCAAGCGCGGGCCAAGGAG...CTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp GGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGAGCTGCTCTTTCAATTaGGTGGCTGCTCGCTTGTCA +
Preference number: 5 (lower is better)
Translates to: GTRWRGHGPGMGCSCKGWSCSFN*VAARLS
Trigger: TGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGCT...CCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CAA 90 bp ACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGCTTCCCACCTGCACCTaGAGAAACAGAGCTCCCTTA +
Preference number: 5 (lower is better)
Translates to: TRWRGHGPGMGCSCKGWQLPTCT*RNRAPL
Trigger: TAAGGGAGCTCTGTTTCTCAAGGTGCAGGTGGGAAG...CTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CAA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCACTTCCCACCTGCACCTaGAGAAACAGAGCTCCCTTA +
Preference number: 5 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLALPTCT*RNRAPL
Trigger: TAAGGGAGCTCTGTTTCTCAAGGTGCAGGTGGGAAG...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CAA 90 bp GATCCCCGTTTATGGCTCCACTGCCCAGATGGGAGGCTCCCGGAGGAGGCCCAGTGTTGCTGCTCCAGCTaGTCGTCAGAGGAGCAGTTA +
Preference number: 5 (lower is better)
Translates to: DPRLWLHCPDGRLPEEAQCCCSS*SSEEQL
Trigger: TAACTGCTCCTCTGACGACAAGCTGGAGCAGCAACA...CTGGGCCTCCTCCGGGAGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCATGTTGCTGCTCCAGCTaGTCGTCAGAGGAGCAGTTA +
Preference number: 5 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLACCCSS*SSEEQL
Trigger: TAACTGCTCCTCTGACGACAAGCTGGAGCAGCAACA...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CAA 90 bp AGCAGCGCAGCTTCCAGGTTCCCGGGCACTGACTGTGGCTCCCTCCCTGTCCCTTGTTGCTGCTCCAGCTaGTCGTCAGAGGAGCAGTTA +
Preference number: 5 (lower is better)
Translates to: SSAASRFPGTDCGSLPVPCCCSS*SSEEQL
Trigger: TAACTGCTCCTCTGACGACAAGCTGGAGCAGCAACA...AGGGACAGGGAGGGAGCCACAGTCAGTGCCCGGGAACCTGGAAGCTGCGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp AGGCAGATCGGGGACCACAAGCTGTTGGCCAGCTCTGCCATGCTGAACTTGGGTTTCTGGCCCGAGCTCTaGCTGGTGGGAAACGCCAGG +
Preference number: 5 (lower is better)
Translates to: RQIGDHKLLASSAMLNLGFWPEL*LVGNAR
Trigger: CCTGGCGTTTCCCACCAGCAAGAGCTCGGGCCAGAA...ACCCAAGTTCAGCATGGCAGAGCTGGCCAACAGCTTGTGGTCCCCGATCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGTGTTAAAAAGGTTGTaGACCCTGGCGAGTGAGTCG +
Preference number: 5 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLAVLKRL*TLASES
Trigger: CGACTCACTCGCCAGGGTCAACAACCTTTTTAACAC...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CAA 90 bp CTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAGATGGGTGTTAAAAAGGTaGTTGACCCTGGCGAGTGAG +
Preference number: 5 (lower is better)
Translates to: LDGGDMAQGWAAAARAGRWVLKR*LTLASE
Trigger: CTCACTCGCCAGGGTCAACAACCTTTTTAACACCCA...TCTGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CAA 90 bp CACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCAAGCTGCTCTTTCAATTaGGTGGCTGCTCGCTTGTCA +
Preference number: 5 (lower is better)
Translates to: HSMEGTWPRDGLQLQGLASCSFN*VAARLS
Trigger: TGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGCT...TGCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000568373.5
CDS-3UTR CAA 90 bp CTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCGAGCAGTTATCAAAGTaGAAATCTCCACAGACGACG +
Preference number: 5 (lower is better)
Translates to: LLPQAPGTRWRGHGPGMGEQLSK*KSPQTT
Trigger: CGTCGTCTGTGGAGATTTCAACTTTGATAACTGCTC...GCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp CAAGCACCGGGCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCCCAGGAAGTGCTTCTTaGGCTGGTTCTGATTGTGTT +
Preference number: 5 (lower is better)
Translates to: QAPGTRWRGHGPGMGCSCPGSAS*AGSDCV
Trigger: AACACAATCAGAACCAGCCAAAGAAGCACTTCCTGG...GCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGCCCGGTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp CAGCTGGAGGCTCCTGGGGCGGGCCTGACTCCTCTGTCCACAGTGAGGCCCAGACCAGGAAGTGCTTCTTaGGCTGGTTCTGATTGTGTT +
Preference number: 5 (lower is better)
Translates to: QLEAPGAGLTPLSTVRPRPGSAS*AGSDCV
Trigger: AACACAATCAGAACCAGCCAAAGAAGCACTTCCTGG...TCTGGGCCTCACTGTGGACAGAGGAGTCAGGCCCGCCCCAGGAGCCTCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS CCA 90 bp CTGGTCAATGGCGAATGTTGGCCAGCCGGTCATGGTTCACCTCGGTaGGCCATGCGGAGGCCTACTGCAGACCCTGTCCAAGTTCTTCTA +
Preference number: 5 (lower is better)
Translates to: LVNGECWPAGHGSPR*AMRRPTADPVQVLL
Trigger: TAGAAGAACTTGGACAGGGTCTGCAGTAGGCCTCCGCATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566723.1
CDS CCA 90 bp TTGTCAAACACCTCCTCCTGGCGAGATGCAACTCCGGCTGGTCAATaGCGAATGTTGGCCAGCCGGTCATGGTTCACCTCGGTGGGCCAT +
Preference number: 5 (lower is better)
Translates to: LSNTSSWRDATPAGQ*RMLASRSWFTSVGH
Trigger: ATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATCTCGCCAGGAGGAGGTGTTTGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566723.1
CDS-3UTR CAA 90 bp GCACTCGATGGAGGGGACATGGCCCAGGGATGGGCTGCAGCTGCAAGGGCTGGCGAGCAGTTATCAAAGTaGAAATCTCCACAGACGACG +
Preference number: 5 (lower is better)
Translates to: ALDGGDMAQGWAAAARAGEQLSK*KSPQTT
Trigger: CGTCGTCTGTGGAGATTTCAACTTTGATAACTGCTC...GCCAGCCCTTGCAGCTGCAGCCCATCCCTGGGCCATGTCCCCTCCATCGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CAA 90 bp CCTGTCCCTGCCCTCCTCCCCCAAGCACCGGGCACTCGATGGAGGGGACATGGCGGGTTACAAACTCGGTaGTGCTGTAGATTTGTAGAA +
Preference number: 5 (lower is better)
Translates to: PVPALLPQAPGTRWRGHGGLQTR*CCRFVE
Trigger: TTCTACAAATCTACAGCACAACCGAGTTTGTAACCC...GCCATGTCCCCTCCATCGAGTGCCCGGTGCTTGGGGGAGGAGGGCAGGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp GGATACTCTCTTCTCGGATCCCCGTTTATGGCTCCACTGCCCAGATGGGAGGCTGTTTGGAGTTTGGCCTaGGGTGAGGCCCGAGCAAGG +
Preference number: 5 (lower is better)
Translates to: GYSLLGSPFMAPLPRWEAVWSLA*GEARAR
Trigger: CCTTGCTCGGGCCTCACCCAAGGCCAAACTCCAAAC...AGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATCCGAGAAGAGAGTATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS TCA 90 bp GAGTGGGGAGGAGCCCGGCCTCACCAGAGGAGCAGTTATCAAAGTTaGAATCTCCACAGACGACGTCAAATGCCACCAGCTCCTCGGGGT +
Preference number: 5 (lower is better)
Translates to: EWGGARPHQRSSYQS*NLHRRRQMPPAPRG
Trigger: ACCCCGAGGAGCTGGTGGCATTTGACGTCGTCTGTGGAGATTTCAACTTTGATAACTGCTCCTCTGGTGAGGCCGGGCTCCTCCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567811.1
CDS GCA 90 bp AGCTGCTCTTTCAATTTGGTGGCTGCTCGCTTGTCAAACACCTCCTaGAGGCACAGGAAGTCCAGGTTGGCGGGGAAGAAGGCGGAGACC +
Preference number: 5 (lower is better)
Translates to: SCSFNLVAARLSNTS*RHRKSRLAGKKAET
Trigger: GGTCTCCGCCTTCTTCCCCGCCAACCTGGACTTCCTGTGCCTGCAGGAGGTGTTTGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 90 bp ATCAGTCGCATGGCTACTGGCAGGTGGTCCGTCAGGCCGGACAGCTaGGTGATAAAACTGAATTCTTCCACCTCGGCCTTCCAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: ISRMATGRWSVRPDS*VIKLNSSTSAFQSG
Trigger: CCCAGACTGGAAGGCCGAGGTGGAAGAATTCAGTTTTATCACCCAGCTGTCCGGCCTGACGGACCACCTGCCAGTAGCCATGCGACTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 90 bp CTGTTTGTTGGTCTTAAGGCGTCAGCCTCTCACTCATCCAACACTTaGTGTCACCTGCCCCGCGCTGTGTCCCGGACAGGGTTGGACACT +
Preference number: 5 (lower is better)
Translates to: LFVGLKASASHSSNT*CHLPRAVSRTGLDT
Trigger: AGTGTCCAACCCTGTCCGGGACACAGCGCGGGGCAGGTGACACCAAGTGTTGGATGAGTGAGAGGCTGACGCCTTAAGACCAACAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS-3UTR CAA 90 bp CATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACGAAGCTTATCACAGGCCAGCCCCTaGGAGGGGTGGGCCGGGCAG +
Preference number: 5 (lower is better)
Translates to: HARRHWQQTKIKNPGRSLSQASP*EGWAGQ
Trigger: CTGCCCGGCCCACCCCTCCAAGGGGCTGGCCTGTGA...TAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp CGAACTTTGAAACAGACAAAACCTTCGCTGCATGACAGGAGCAGCCCTGGAGTCCACAGGAAGTCCAGGTaGGCGGGGAAGAAGGCGGAG +
Preference number: 5 (lower is better)
Translates to: RTLKQTKPSLHDRSSPGVHRKSR*AGKKAE
Trigger: CTCCGCCTTCTTCCCCGCCAACCTGGACTTCCTGTG...GACTCCAGGGCTGCTCCTGTCATGCAGCGAAGGTTTTGTCTGTTTCAAAGTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp TGGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGCAGCAACTGTCAGCCTaGCTGCCCCAGCTTGCGCAC +
Preference number: 5 (lower is better)
Translates to: WPCPGSASLAGSDCVWSLQQLSA*LPQLAH
Trigger: GTGCGCAAGCTGGGGCAGCAAGGCTGACAGTTGCTG...CAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp TGGCCGTGCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGGGGACCACAAGCTGTaGGCCAGCTCTGCCATGCTG +
Preference number: 5 (lower is better)
Translates to: WPCPGSASLAGSDCVWSLGDHKL*ASSAML
Trigger: CAGCATGGCAGAGCTGGCCAACAGCTTGTGGTCCCC...CAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGCACGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS TCA 90 bp GCATGCAGGTGTGTGCAGGCGATGTACCCGACGATTCTTTGGTCCTaGGGTGTGCTTCCCACCTGCACCTTGAGAAACAGAGCTCCCTTA +
Preference number: 5 (lower is better)
Translates to: ACRCVQAMYPTILWS*GVLPTCTLRNRAPL
Trigger: TAAGGGAGCTCTGTTTCTCAAGGTGCAGGTGGGAAGCACACCTCAGGACCAAAGAATCGTCGGGTACATCGCCTGCACACACCTGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000566009.5
ENST00000567223.6
ENST00000567811.1
ENST00000568373.5
ENST00000574662.1
CDS CCA 90 bp CCTCATCTGCCGTGTGATCTCACCAAGATCCACTTGATTATTTGCTaGGCCTCATTGATTCCTGGCTCGTGGCCTTGGGAGCCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: PHLPCDLTKIHLIIC*ASLIPGSWPWEPQS
Trigger: GCTCTGCGGCTCCCAAGGCCACGAGCCAGGAATCAATGAGGCCCAGCAAATAATCAAGTGGATCTTGGTGAGATCACACGGCAGATGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS-3UTR CAA 90 bp AGGGTGCAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGGTTTGGAGTTTGGCCTaGGGTGAGGCCCGAGCAAGG +
Preference number: 5 (lower is better)
Translates to: RVQACETTLAADKNKEPWVWSLA*GEARAR
Trigger: CCTTGCTCGGGCCTCACCCAAGGCCAAACTCCAAAC...CCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp AGGCAGATCGGGGACCACAAGCTGTTGGCCAGCTCTGCCATGCTGAACTTGGGTATGACAGAAAATGACTaGCCTAAGGCCGCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: RQIGDHKLLASSAMLNLGMTEND*PKAACE
Trigger: CTCACAGGCGGCCTTAGGCAAGTCATTTTCTGTCAT...ACCCAAGTTCAGCATGGCAGAGCTGGCCAACAGCTTGTGGTCCCCGATCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS GCA 90 bp AGAGGAGCAGTTATCAAAGTTGAAATCTCCACAGACGACGTCAAATaGCACCAGCTCCTCGGGGTTGGCTGCGCTGGACGAGGAGGTAGA +
Preference number: 5 (lower is better)
Translates to: RGAVIKVEISTDDVK*HQLLGVGCAGRGGR
Trigger: TCTACCTCCTCGTCCAGCGCAGCCAACCCCGAGGAGCTGGTGGCATTTGACGTCGTCTGTGGAGATTTCAACTTTGATAACTGCTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000566009.5
ENST00000567223.6
ENST00000567811.1
ENST00000568373.5
ENST00000574662.1
CDS-3UTR CAA 90 bp GGATACTCTCTTCTCGGATCCCCGTTTATGGCTCCACTGCCCAGATGGGAGGCTGTGTTAAAAAGGTTGTaGACCCTGGCGAGTGAGTCG +
Preference number: 5 (lower is better)
Translates to: GYSLLGSPFMAPLPRWEAVLKRL*TLASES
Trigger: CGACTCACTCGCCAGGGTCAACAACCTTTTTAACAC...AGCCTCCCATCTGGGCAGTGGAGCCATAAACGGGGATCCGAGAAGAGAGTATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp GTGCAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACGCTTGTGGCCTTGGTGTaGGCTGGGGTAGCTGTTGAG +
Preference number: 5 (lower is better)
Translates to: VQACETTLAADKNKEPWTLVALV*AGVAVE
Trigger: CTCAACAGCTACCCCAGCCAACACCAAGGCCACAAG...CGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS CCA 90 bp CGTACAGGATGTACTCGAAGTAGCCGTGCAGCTGCTCTTTCAATTTaGTGGCTGCTCGCTTGTCAAACACCTCCTGCAGGCACAGGAAGT +
Preference number: 5 (lower is better)
Translates to: RTGCTRSSRAAALSI*WLLACQTPPAGTGS
Trigger: ACTTCCTGTGCCTGCAGGAGGTGTTTGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGCTGCACGGCTACTTCGAGTACATCCTGTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 90 bp ACAGGATGTACTCGAAGTAGCCGTGCAGCTGCTCTTTCAATTTGGTaGCTGCTCGCTTGTCAAACACCTCCTCCTGGCGAGATGCAACTC +
Preference number: 5 (lower is better)
Translates to: TGCTRSSRAAALSIW*LLACQTPPPGEMQL
Trigger: GAGTTGCATCTCGCCAGGAGGAGGTGTTTGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGCTGCACGGCTACTTCGAGTACATCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566723.1
CDS CCA 90 bp CGTACAGGATGTACTCGAAGTAGCCGTGCAGCTGCTCTTTCAATTTaGTGGCTGCTCGCTTGTCAAACACCTCCTCCTGGCGAGATGCAA +
Preference number: 5 (lower is better)
Translates to: RTGCTRSSRAAALSI*WLLACQTPPPGEMQ
Trigger: TTGCATCTCGCCAGGAGGAGGTGTTTGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGCTGCACGGCTACTTCGAGTACATCCTGTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566723.1
CDS-3UTR CAA 90 bp GCTGCTTCTGGAAGTTGGGGGCCTCCACATCATGAATCCCAGTCAAGGCTCACATGGGTGTTAAAAAGGTaGTTGACCCTGGCGAGTGAG +
Preference number: 5 (lower is better)
Translates to: AASGSWGPPHHESQSRLTWVLKR*LTLASE
Trigger: CTCACTCGCCAGGGTCAACAACCTTTTTAACACCCA...TGTGAGCCTTGACTGGGATTCATGATGTGGAGGCCCCCAACTTCCAGAAGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp GTGCAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACGGTACCCGACGATTCTTaGGTCCTGAGGTGTGCTTCC +
Preference number: 5 (lower is better)
Translates to: VQACETTLAADKNKEPWTVPDDS*VLRCAS
Trigger: GGAAGCACACCTCAGGACCAAAGAATCGTCGGGTAC...CGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp AAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACACGAACCCGGTCTCTGCCATGCTGAACTaGGGTGCCAGTACCACACCC +
Preference number: 5 (lower is better)
Translates to: KEPWTKLKRRYREYTNPVSAMLN*GASTTP
Trigger: GGGTGTGGTACTGGCACCCAAGTTCAGCATGGCAGA...GACCGGGTTCGTGTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS CCA 90 bp TCTCACCAAGATCCACTTGATTATTTGCTGGGCCTCATTGATTCCTaGCTCGTGGCCTTGGGAGCCGCAGAGCCTTGTGTTTCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: SHQDPLDYLLGLIDS*LVALGAAEPCVSLA
Trigger: TGCAAGAGAAACACAAGGCTCTGCGGCTCCCAAGGCCACGAGCCAGGAATCAATGAGGCCCAGCAAATAATCAAGTGGATCTTGGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS-3UTR CAA 90 bp GCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTTGGGCCACTGGGACCTTGTaGTCCTTCTCTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: AQEVLLWLVLIVFGVWPWATGTL*SFSLKK
Trigger: CTTCTTCAGAGAGAAGGACAACAAGGTCCCAGTGGC...CCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp AAAAATAAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACACGAACGGGGCTGTAGGCATCTaGGGGCTGGAGGCAGATCGG +
Preference number: 5 (lower is better)
Translates to: KNKEPWTKLKRRYREYTNGAVGI*GLEADR
Trigger: CCGATCTGCCTCCAGCCCCAAGATGCCTACAGCCCC...GTTCGTGTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS CCA 90 bp CACTTGATTATTTGCTGGGCCTCATTGATTCCTGGCTCGTGGCCTTaGGAGCCGCAGAGCCTTGTGTTTCTCTTGCAAAAACAAGCAATC +
Preference number: 5 (lower is better)
Translates to: HLIICWASLIPGSWP*EPQSLVFLLQKQAI
Trigger: GATTGCTTGTTTTTGCAAGAGAAACACAAGGCTCTGCGGCTCCCAAGGCCACGAGCCAGGAATCAATGAGGCCCAGCAAATAATCAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CCA 90 bp AAGATCCACTTGATTATTTGCTGGGCCTCATTGATTCCTGGCTCGTaGCCTTGGGAGCCGCAGAGCCTTGTGTTTCTCTTGCAAAAACAA +
Preference number: 5 (lower is better)
Translates to: KIHLIICWASLIPGS*PWEPQSLVFLLQKQ
Trigger: TTGTTTTTGCAAGAGAAACACAAGGCTCTGCGGCTCCCAAGGCCACGAGCCAGGAATCAATGAGGCCCAGCAAATAATCAAGTGGATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS-3UTR CAA 90 bp GCCCAGGAAGTGCTTCTTTGGCTGGTTCTGATTGTGTTTGGAGTTTGGCCTTGGGCATGCGAGACGACATaGGCAGCAGACAAAAATAAA +
Preference number: 5 (lower is better)
Translates to: AQEVLLWLVLIVFGVWPWACETT*AADKNK
Trigger: TTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGC...CCAAGGCCAAACTCCAAACACAATCAGAACCAGCCAAAGAAGCACTTCCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp GTGCAGGCATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACGGCATGCGAGACGACATaGGCAGCAGACAAAAATAAA +
Preference number: 5 (lower is better)
Translates to: VQACETTLAADKNKEPWTACETT*AADKNK
Trigger: TTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGC...CGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATGCCTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp AAAAATAAAGAACCCTGGACGAAGCTTAAGAGGAGATACAGAGAGTACACGAACTTGGTGGCTGCTCGCTaGTCAAACACCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: KNKEPWTKLKRRYREYTNLVAAR*SNTSCR
Trigger: CCTGCAGGAGGTGTTTGACAAGCGAGCAGCCACCAA...GTTCGTGTACTCTCTGTATCTCCTCTTAAGCTTCGTCCAGGGTTCTTTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS-3UTR CAA 90 bp CATGCGAGACGACATTGGCAGCAGACAAAAATAAAGAACCCTGGACGAAGCTTAGGGTTACAAACTCGGTaGTGCTGTAGATTTGTAGAA +
Preference number: 5 (lower is better)
Translates to: HARRHWQQTKIKNPGRSLGLQTR*CCRFVE
Trigger: TTCTACAAATCTACAGCACAACCGAGTTTGTAACCC...TAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGCTGCCAATGTCGTCTCGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000574662.1
CDS-3UTR CAA 90 bp ATACTAACCCACGGGTTACAAACTCGGTTGTGCTGTAGATTTGTAGAAAATCGTGTTGAGTCTCGAACTTaGAAACAGACAAAACCTTCG +
Preference number: 5 (lower is better)
Translates to: ILTHGLQTRLCCRFVENRVESRT*KQTKPS
Trigger: CGAAGGTTTTGTCTGTTTCAAAGTTCGAGACTCAAC...ACGATTTTCTACAAATCTACAGCACAACCGAGTTTGTAACCCGTGGGTTAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS CCA 72 bp CTCCGGGCTGCTGCTGTCGACAGGGTCCCCAGAGGCTaGGCCGTTGGCAGCCTCGTCACCGGGGTGCCGCCC +
Preference number: 6 (lower is better)
Translates to: LRAAAVDRVPRG*AVGSLVTGVPP
Trigger: GGGCGGCACCCCGGTGACGAGGCTGCCAACGGCCCAGCCTCTGGGGACCCTGTCGACAGCAGCAGCCCGGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 72 bp GGCCTGGCCCCCAGGCACAGGGTCGTCAGCTTCAGGTaGCCGGCCGCCCTCCTCGCCACCGATGCGCACGAT +
Preference number: 6 (lower is better)
Translates to: GLAPRHRVVSFR*PAALLATDAHD
Trigger: ATCGTGCGCATCGGTGGCGAGGAGGGCGGCCGGCCACCTGAAGCTGACGACCCTGTGCCTGGGGGCCAGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS TCA 72 bp GGGGACGGCCCGGGCCACCCCATCGCCGCCCTGTGGTaGCACCAGGCTGCTGAAGCTAGCGGCGCTGATGGA +
Preference number: 6 (lower is better)
Translates to: GDGPGHPIAALW*HQAAEASGADG
Trigger: TCCATCAGCGCCGCTAGCTTCAGCAGCCTGGTGTCACCACAGGGCGGCGATGGGGTGGCCCGGGCCGTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 72 bp CTGGGCGCCGCAGCCGGCCCTACTACATGGTGTCCGTaGCAGCTGCGGGCACTTTCCTGGGCGAGGGTGGGC +
Preference number: 6 (lower is better)
Translates to: LGAAAGPTTWCP*QLRALSWARVG
Trigger: GCCCACCCTCGCCCAGGAAAGTGCCCGCAGCTGCCACGGACACCATGTAGTAGGGCCGGCTGCGGCGCCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000561749.1
CDS CAA 72 bp CTGCTGCTGTCGACAGGGTCCCCAGAGGCTGGGCCGTaGGCAGCCTCGTCACCGGGGTGCCGCCCACCGTCA +
Preference number: 6 (lower is better)
Translates to: LLLSTGSPEAGP*AASSPGCRPPS
Trigger: TGACGGTGGGCGGCACCCCGGTGACGAGGCTGCCAACGGCCCAGCCTCTGGGGACCCTGTCGACAGCAGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CAA 90 bp TCCTCCGGGCTGCTGCTGTCGACAGGGTCCCCAGAGGCTGGGCCGTaGGCAGCCTCGTCACCGGGGTGCCGCCCACCGTCACCCTTGTAC +
Preference number: 6 (lower is better)
Translates to: SSGLLLSTGSPEAGP*AASSPGCRPPSPLY
Trigger: GTACAAGGGTGACGGTGGGCGGCACCCCGGTGACGAGGCTGCCAACGGCCCAGCCTCTGGGGACCCTGTCGACAGCAGCAGCCCGGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS GCA 72 bp CGCCACCGATGCGCACGATGCAGGCATCCTCCGGGCTaGTGCTGTCGACAGGGTCCCCAGAGGCTGGGCCGT +
Preference number: 6 (lower is better)
Translates to: RHRCARCRHPPG*CCRQGPQRLGR
Trigger: ACGGCCCAGCCTCTGGGGACCCTGTCGACAGCAGCAGCCCGGAGGATGCCTGCATCGTGCGCATCGGTGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 72 bp GGTGTCACCTGCCCCGCGCTGTGTCCCGGACAGGGTTaGACACTCGCAGGGAGGCCTCAGACTGGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: GVTCPALCPGQG*TLAGRPQTGPC
Trigger: GCAGGGCCCAGTCTGAGGCCTCCCTGCGAGTGTCCAACCCTGTCCGGGACACAGCGCGGGGCAGGTGACACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CAA 90 bp GGGCCGTTGGCAGCCTCGTCACCGGGGTGCCGCCCACCGTCACCCTaGTACTCCACAGAGGCTGTCCTCTTAATGCTCCCGGGGACGGCC +
Preference number: 6 (lower is better)
Translates to: GPLAASSPGCRPPSP*YSTEAVLLMLPGTA
Trigger: GGCCGTCCCCGGGAGCATTAAGAGGACAGCCTCTGTGGAGTACAAGGGTGACGGTGGGCGGCACCCCGGTGACGAGGCTGCCAACGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS TCA 72 bp GGCTGCCCCACCGGCCAGGCCCTTGTCTTCCAGCCGTaGATAGATGTAGGGCCGGCGGGCCGACTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: GCPTGQALVFQP*IDVGPAGRLQW
Trigger: CCACTGCAGTCGGCCCGCCGGCCCTACATCTATTCACGGCTGGAAGACAAGGGCCTGGCCGGTGGGGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CAA 72 bp TGGTGTCACCTGCCCCGCGCTGTGTCCCGGACAGGGTaGGACACTCGCAGGGAGGCCTCAGACTGGGCCCTG +
Preference number: 6 (lower is better)
Translates to: WCHLPRAVSRTG*DTRREASDWAL
Trigger: CAGGGCCCAGTCTGAGGCCTCCCTGCGAGTGTCCAACCCTGTCCGGGACACAGCGCGGGGCAGGTGACACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS TCA 72 bp GGACTCCCGGGAGGCCGAGGGGCTGCCCAGGCTCCCTaGATCCCCGTCCTGCTGATTATGGTTGGGCGTCTG +
Preference number: 6 (lower is better)
Translates to: GLPGGRGAAQAP*IPVLLIMVGRL
Trigger: CAGACGCCCAACCATAATCAGCAGGACGGGGATTCAGGGAGCCTGGGCAGCCCCTCGGCCTCCCGGGAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS GCA 72 bp CCTCATGGTCGAAGGCCTCGTCGGGGTGCCGCCTCCTaGGTGCAGCCGCCTTCTTCACCACCGAGGCCTTGT +
Preference number: 6 (lower is better)
Translates to: PHGRRPRRGAAS*VQPPSSPPRPC
Trigger: ACAAGGCCTCGGTGGTGAAGAAGGCGGCTGCACGCAGGAGGCGGCACCCCGACGAGGCCTTCGACCATGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 72 bp GCTCCTTCCGCCCCTTCTGGCCCGAGCTCTTGCTGGTaGGAAACGCCAGGTACTCCCTGCGGCCCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: APSAPSGPSSCW*ETPGTPCGPPH
Trigger: GTGAGGAGGGCCGCAGGGAGTACCTGGCGTTTCCCACCAGCAAGAGCTCGGGCCAGAAGGGGCGGAAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000574662.1
CDS CCA 72 bp GCAGCTCCTTCCGCCCCTTCTGGCCCGAGCTCTTGCTaGTGGGAAACGCCAGGTACTCCCTGCGGCCCTCCT +
Preference number: 6 (lower is better)
Translates to: AAPSAPSGPSSC*WETPGTPCGPP
Trigger: AGGAGGGCCGCAGGGAGTACCTGGCGTTTCCCACCAGCAAGAGCTCGGGCCAGAAGGGGCGGAAGGAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000574662.1
CDS TCA 72 bp CGTCTGCCCGCTGGCGCTTCTCGTAGGTGGTGGGTATaGAGGAGGCAGCGAGCCGGTCCACCAGCCAGTAGC +
Preference number: 6 (lower is better)
Translates to: RLPAGASRRWWV*RRQRAGPPASS
Trigger: GCTACTGGCTGGTGGACCGGCTCGCTGCCTCCTTCATACCCACCACCTACGAGAAGCGCCAGCGGGCAGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219334.10
ENST00000561749.1
ENST00000563226.1
ENST00000568373.5
CDS GCA 72 bp ATGGTCGAAGGCCTCGTCGGGGTGCCGCCTCCTGCGTaGAGCCGCCTTCTTCACCACCGAGGCCTTGTACAG +
Preference number: 6 (lower is better)
Translates to: MVEGLVGVPPPA*SRLLHHRGLVQ
Trigger: CTGTACAAGGCCTCGGTGGTGAAGAAGGCGGCTGCACGCAGGAGGCGGCACCCCGACGAGGCCTTCGACCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS GCA 72 bp TCAGCAGCTCCTTCCGCCCCTTCTGGCCCGAGCTCTTaGTGGTGGGAAACGCCAGGTACTCCCTGCGGCCCT +
Preference number: 6 (lower is better)
Translates to: SAAPSAPSGPSS*WWETPGTPCGP
Trigger: AGGGCCGCAGGGAGTACCTGGCGTTTCCCACCAGCAAGAGCTCGGGCCAGAAGGGGCGGAAGGAGCTGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000574662.1
CDS GCA 72 bp CCTCTGCATGCAGCATGTAGTCGATGCGCCGGCCGTTaGCCTTCAGCAGCTCCTTCCGCCCCTTCTGGCCCG +
Preference number: 6 (lower is better)
Translates to: PLHAACSRCAGR*PSAAPSAPSGP
Trigger: CGGGCCAGAAGGGGCGGAAGGAGCTGCTGAAGGGCAACGGCCGGCGCATCGACTACATGCTGCATGCAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000563396.1
ENST00000568373.5
ENST00000574662.1
CDS GCA 72 bp CACCTCGGCCTTCCAGTCTGGGCACAGCCCCTCCTCTaGATGCAGCATGTAGTCGATGCGCCGGCCGTTGCC +
Preference number: 6 (lower is better)
Translates to: HLGLPVWAQPLL*MQHVVDAPAVA
Trigger: GGCAACGGCCGGCGCATCGACTACATGCTGCATGCAGAGGAGGGGCTGTGCCCAGACTGGAAGGCCGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 72 bp CACCGAGGCCTTGTACAGGAGCTTGCTGTTGGCACCTaGCTCCCCGCTGGCACTGGTGTCTGGCCCAGCTCG +
Preference number: 6 (lower is better)
Translates to: HRGLVQELAVGT*LPAGTGVWPSS
Trigger: CGAGCTGGGCCAGACACCAGTGCCAGCGGGGAGCCAGGTGCCAACAGCAAGCTCCTGTACAAGGCCTCGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 72 bp AAGTCCAGGTTGGCGGGGAAGAAGGCGGAGACCTCATaGTCGAAGGCCTCGTCGGGGTGCCGCCTCCTGCGT +
Preference number: 6 (lower is better)
Translates to: KSRLAGKKAETS*SKASSGCRLLR
Trigger: ACGCAGGAGGCGGCACCCCGACGAGGCCTTCGACCATGAGGTCTCCGCCTTCTTCCCCGCCAACCTGGACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 72 bp GCCAGTCCTGAAGCAGGTCCAGCTGCCCACACCGGATaGCGCTGTCCTCTTGCGGGGCATGCAGGTGTGTGC +
Preference number: 6 (lower is better)
Translates to: ASPEAGPAAHTG*RCPLAGHAGVC
Trigger: GCACACACCTGCATGCCCCGCAAGAGGACAGCGCCATCCGGTGTGGGCAGCTGGACCTGCTTCAGGACTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000566009.5
ENST00000567223.6
ENST00000567811.1
ENST00000568373.5
ENST00000574662.1
CDS CCA 72 bp CGGCCGTTGCCCTTCAGCAGCTCCTTCCGCCCCTTCTaGCCCGAGCTCTTGCTGGTGGGAAACGCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: RPLPFSSSFRPF*PELLLVGNARY
Trigger: GTACCTGGCGTTTCCCACCAGCAAGAGCTCGGGCCAGAAGGGGCGGAAGGAGCTGCTGAAGGGCAACGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000574662.1
CDS CCA 72 bp CGGACAGGGTTGGACACTCGCAGGGAGGCCTCAGACTaGGCCCTGCACGACAAGAACCCACTGGCCGGAGGA +
Preference number: 6 (lower is better)
Translates to: RTGLDTRREASD*ALHDKNPLAGG
Trigger: TCCTCCGGCCAGTGGGTTCTTGTCGTGCAGGGCCCAGTCTGAGGCCTCCCTGCGAGTGTCCAACCCTGTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CCA 72 bp CGGCCGTTGCCCTTCAGCAGCTCCTTCCGCCCCTTCTaGCCCGAGCTCTTGTTCTGCAGGTTGTCGGGGGTG +
Preference number: 6 (lower is better)
Translates to: RPLPFSSSFRPF*PELLFCRLSGV
Trigger: CACCCCCGACAACCTGCAGAACAAGAGCTCGGGCCAGAAGGGGCGGAAGGAGCTGCTGAAGGGCAACGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563396.1
ENST00000568373.5
CDS CAA 90 bp CTGCGTGCAGCCGCCTTCTTCACCACCGAGGCCTTGTACAGGAGCTaGCTGTTGGCACCTGGCTCCCCGCTGGCACTGGTGTCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: LRAAAFFTTEALYRS*LLAPGSPLALVSGP
Trigger: TGGGCCAGACACCAGTGCCAGCGGGGAGCCAGGTGCCAACAGCAAGCTCCTGTACAAGGCCTCGGTGGTGAAGAAGGCGGCTGCACGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CAA 90 bp TCCAACACTTGGTGTCACCTGCCCCGCGCTGTGTCCCGGACAGGGTaGGACACTCGCAGGGAGGCCTCAGACTGGGCCCTGCACGACAAG +
Preference number: 6 (lower is better)
Translates to: SNTWCHLPRAVSRTG*DTRREASDWALHDK
Trigger: CTTGTCGTGCAGGGCCCAGTCTGAGGCCTCCCTGCGAGTGTCCAACCCTGTCCGGGACACAGCGCGGGGCAGGTGACACCAAGTGTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CCA 72 bp GGCGAATGTTGGCCAGCCGGTCATGGTTCACCTCGGTaGGCCATGCGGAGGCCTACTGCAGACCCTGAGGAG +
Preference number: 6 (lower is better)
Translates to: GECWPAGHGSPR*AMRRPTADPEE
Trigger: CTCCTCAGGGTCTGCAGTAGGCCTCCGCATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS CCA 72 bp CCGGCTGGTCAATGGCGAATGTTGGCCAGCCGGTCATaGTTCACCTCGGTGGGCCATGCGGAGGCCTACTGC +
Preference number: 6 (lower is better)
Translates to: PAGQWRMLASRS*FTSVGHAEAYC
Trigger: GCAGTAGGCCTCCGCATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000561749.1
ENST00000566723.1
CDS CCA 72 bp GGCGAATGTTGGCCAGCCGGTCATGGTTCACCTCGGTaGGCCATGCGGAGGCCTACTGCAGACCCTCTGACG +
Preference number: 6 (lower is better)
Translates to: GECWPAGHGSPR*AMRRPTADPLT
Trigger: CGTCAGAGGGTCTGCAGTAGGCCTCCGCATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561749.1
CDS CAA 72 bp GCAGCCTCGTCACCGGGGTGCCGCCCACCGTCACCCTaGTACTCCACAGAGGCTGTCCTCTTAATGCTCCCG +
Preference number: 6 (lower is better)
Translates to: AASSPGCRPPSP*YSTEAVLLMLP
Trigger: CGGGAGCATTAAGAGGACAGCCTCTGTGGAGTACAAGGGTGACGGTGGGCGGCACCCCGGTGACGAGGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CAA 72 bp GCCGCCTTCTTCACCACCGAGGCCTTGTACAGGAGCTaGCTGTTGGCACCTGGCTCCCCGCTGGCACTGGTG +
Preference number: 6 (lower is better)
Translates to: AAFFTTEALYRS*LLAPGSPLALV
Trigger: CACCAGTGCCAGCGGGGAGCCAGGTGCCAACAGCAAGCTCCTGTACAAGGCCTCGGTGGTGAAGAAGGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CAA 72 bp CTCCTGCGTGCAGCCGCCTTCTTCACCACCGAGGCCTaGTACAGGAGCTTGCTGTTGGCACCTGGCTCCCCG +
Preference number: 6 (lower is better)
Translates to: LLRAAAFFTTEA*YRSLLLAPGSP
Trigger: CGGGGAGCCAGGTGCCAACAGCAAGCTCCTGTACAAGGCCTCGGTGGTGAAGAAGGCGGCTGCACGCAGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CAA 90 bp GTCACCTCCTGGCGAGATGCAACTCCGGCTGGTCAATGGCGAATGTaGGCCAGCCGGTCATGGTTCACCTCGGTGGGCCATGCGGAGGCC +
Preference number: 6 (lower is better)
Translates to: VTSWRDATPAGQWRM*ASRSWFTSVGHAEA
Trigger: GGCCTCCGCATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATCTCGCCAGGAGGTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000561749.1
CDS CAA 90 bp ACCTCCTCCTGGCGAGATGCAACTCCGGCTGGTCAATGGCGAATGTaGGCCAGCCGGTCATGGTTCACCTCGGTGGGCCATGCGGAGGCC +
Preference number: 6 (lower is better)
Translates to: TSSWRDATPAGQWRM*ASRSWFTSVGHAEA
Trigger: GGCCTCCGCATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATCTCGCCAGGAGGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566723.1
CDS GCA 72 bp CCGCCTTCTTCACCACCGAGGCCTTGTACAGGAGCTTaGTGTTGGCACCTGGCTCCCCGCTGGCACTGGTGT +
Preference number: 6 (lower is better)
Translates to: PPSSPPRPCTGA*CWHLAPRWHWC
Trigger: ACACCAGTGCCAGCGGGGAGCCAGGTGCCAACAGCAAGCTCCTGTACAAGGCCTCGGTGGTGAAGAAGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 72 bp TGGCGAGTGAGTCGGGCAGGAGGCAGACGTTGGCAGTaGCAAAGCAGAAGCTTTTGCCAGGCCCCGTGCCCT +
Preference number: 6 (lower is better)
Translates to: WRVSRAGGRRWQ*QSRSFCQAPCP
Trigger: AGGGCACGGGGCCTGGCAAAAGCTTCTGCTTTGCCACTGCCAACGTCTGCCTCCTGCCCGACTCACTCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 72 bp TCTTCACCACCGAGGCCTTGTACAGGAGCTTGCTGTTaGCACCTGGCTCCCCGCTGGCACTGGTGTCTGGCC +
Preference number: 6 (lower is better)
Translates to: SSPPRPCTGACC*HLAPRWHWCLA
Trigger: GGCCAGACACCAGTGCCAGCGGGGAGCCAGGTGCCAACAGCAAGCTCCTGTACAAGGCCTCGGTGGTGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS GCA 72 bp TTGATCTGGGGCCGGGCGGCCCCATTGCGGATTCTCTaGCCGATCTCCTTGGCCCGCGCTTGGGTGTTAAAA +
Preference number: 6 (lower is better)
Translates to: LIWGRAAPLRIL*PISLARAWVLK
Trigger: TTTTAACACCCAAGCGCGGGCCAAGGAGATCGGGCAGAGAATCCGCAATGGGGCCGCCCGGCCCCAGATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS GCA 72 bp CGTCAGCCTCTCACTCATCCAACACTTGGTGTCACCTaGCCCGCGCTGTGTCCCGGACAGGGTTGGACACTC +
Preference number: 6 (lower is better)
Translates to: RQPLTHPTLGVT*PALCPGQGWTL
Trigger: GAGTGTCCAACCCTGTCCGGGACACAGCGCGGGGCAGGTGACACCAAGTGTTGGATGAGTGAGAGGCTGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS GCA 72 bp GTTGGCCAGCCGGTCATGGTTCACCTCGGTGGGCCATaGGGAGGCCTACTGCAGACCCTGTCCAAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: VGQPVMVHLGGP*GGLLQTLSKFF
Trigger: GAAGAACTTGGACAGGGTCTGCAGTAGGCCTCCGCATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566723.1
CDS CCA 72 bp GGCGAGATGCAACTCCGGCTGGTCAATGGCGAATGTTaGCCAGCCGGTCATGGTTCACCTCGGTGGGCCATG +
Preference number: 6 (lower is better)
Translates to: GEMQLRLVNGEC*PAGHGSPRWAM
Trigger: CATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATCTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000561749.1
ENST00000566723.1
CDS CCA 72 bp GGAAAGGGGGTCGTGTACAAAACCATCGCAGCTCACTaGGCGCCGCAGCCGGCCCTACTACATGGTGTCCGT +
Preference number: 6 (lower is better)
Translates to: GKGVVYKTIAAH*APQPALLHGVR
Trigger: ACGGACACCATGTAGTAGGGCCGGCTGCGGCGCCCAGTGAGCTGCGATGGTTTTGTACACGACCCCCTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219334.10
ENST00000561749.1
ENST00000563226.1
ENST00000568373.5
CDS CCA 72 bp GAAGGAGGCAGCGAGCCGGTCCACCAGCCAGTAGCATaGAAAGATAAGGGCCCAGGACACACAGTGCAGGGC +
Preference number: 6 (lower is better)
Translates to: EGGSEPVHQPVA*KDKGPGHTVQG
Trigger: GCCCTGCACTGTGTGTCCTGGGCCCTTATCTTTCCATGCTACTGGCTGGTGGACCGGCTCGCTGCCTCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219334.10
ENST00000561749.1
ENST00000563226.1
ENST00000568373.5
CDS CCA 72 bp GGTCTTAAGGCGTCAGCCTCTCACTCATCCAACACTTaGTGTCACCTGCCCCGCGCTGTGTCCCGGACAGGG +
Preference number: 6 (lower is better)
Translates to: GLKASASHSSNT*CHLPRAVSRTG
Trigger: CCCTGTCCGGGACACAGCGCGGGGCAGGTGACACCAAGTGTTGGATGAGTGAGAGGCTGACGCCTTAAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CAA 72 bp TTGACCCTGGCGAGTGAGTCGGGCAGGAGGCAGACGTaGGCAGTGGCAAAGCAGAAGCTTTTGCCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: LTLASESGRRQT*AVAKQKLLPGP
Trigger: GGGGCCTGGCAAAAGCTTCTGCTTTGCCACTGCCAACGTCTGCCTCCTGCCCGACTCACTCGCCAGGGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CAA 90 bp CTCTGCCCGATCTCCTTGGCCCGCGCTTGGGTGTTAAAAAGGTTGTaGACCCTGGCGAGTGAGTCGGGCAGGAGGCAGACGTTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: LCPISLARAWVLKRL*TLASESGRRQTLAV
Trigger: CACTGCCAACGTCTGCCTCCTGCCCGACTCACTCGCCAGGGTCAACAACCTTTTTAACACCCAAGCGCGGGCCAAGGAGATCGGGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS TCA 72 bp TGGCAGCTGGCTCGAAGCAAGAGCGCGGCGCCCCGTTaGTGGGTGTTACTAGTGGACTCGTCCTTTGTCTGC +
Preference number: 6 (lower is better)
Translates to: WQLARSKSAAPR*WVLLVDSSFVC
Trigger: GCAGACAAAGGACGAGTCCACTAGTAACACCCATCAACGGGGCGCCGCGCTCTTGCTTCGAGCCAGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566009.5
CDS CCA 72 bp GTCACCTCCTGGCGAGATGCAACTCCGGCTGGTCAATaGCGAATGTTGGCCAGCCGGTCATGGTTCACCTCG +
Preference number: 6 (lower is better)
Translates to: VTSWRDATPAGQ*RMLASRSWFTS
Trigger: CGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATCTCGCCAGGAGGTGAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000561749.1
CDS CCA 72 bp AGGAGGGGTCACCTCCTGGCGAGATGCAACTCCGGCTaGTCAATGGCGAATGTTGGCCAGCCGGTCATGGTT +
Preference number: 6 (lower is better)
Translates to: RRGHLLARCNSG*SMANVGQPVMV
Trigger: AACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATCTCGCCAGGAGGTGACCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219334.10
ENST00000561749.1
CDS CCA 72 bp ACCTCCTCCTGGCGAGATGCAACTCCGGCTGGTCAATaGCGAATGTTGGCCAGCCGGTCATGGTTCACCTCG +
Preference number: 6 (lower is better)
Translates to: TSSWRDATPAGQ*RMLASRSWFTS
Trigger: CGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATCTCGCCAGGAGGAGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566723.1
CDS CAA 72 bp TGGCGAGATGCAACTCCGGCTGGTCAATGGCGAATGTaGGCCAGCCGGTCATGGTTCACCTCGGTGGGCCAT +
Preference number: 6 (lower is better)
Translates to: WRDATPAGQWRM*ASRSWFTSVGH
Trigger: ATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATCTCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000561749.1
ENST00000566723.1
CDS CAA 72 bp CCGATCTCCTTGGCCCGCGCTTGGGTGTTAAAAAGGTaGTTGACCCTGGCGAGTGAGTCGGGCAGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: PISLARAWVLKR*LTLASESGRRQ
Trigger: CTGCCTCCTGCCCGACTCACTCGCCAGGGTCAACAACCTTTTTAACACCCAAGCGCGGGCCAAGGAGATCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CAA 72 bp CGGGCGGCCCCATTGCGGATTCTCTGCCCGATCTCCTaGGCCCGCGCTTGGGTGTTAAAAAGGTTGTTGACC +
Preference number: 6 (lower is better)
Translates to: RAAPLRILCPIS*ARAWVLKRLLT
Trigger: GGTCAACAACCTTTTTAACACCCAAGCGCGGGCCAAGGAGATCGGGCAGAGAATCCGCAATGGGGCCGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS TCA 72 bp GAGGAGGTAGATTTTCGGAAATCAGCCAGCCAGTCCTaGAGCAGGTCCAGCTGCCCACACCGGATGGCGCTG +
Preference number: 6 (lower is better)
Translates to: EEVDFRKSASQS*SRSSCPHRMAL
Trigger: CAGCGCCATCCGGTGTGGGCAGCTGGACCTGCTTCAGGACTGGCTGGCTGATTTCCGAAAATCTACCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000566009.5
ENST00000567223.6
ENST00000567811.1
ENST00000568373.5
ENST00000574662.1
CDS GCA 72 bp CCTCACTCTCCAGGACCTTCTGCAGGTTGTCGGGGGTaGACACATCCTCATCGTACAGGCCGTTCGTGTCCA +
Preference number: 6 (lower is better)
Translates to: PHSPGPSAGCRG*THPHRTGRSCP
Trigger: TGGACACGAACGGCCTGTACGATGAGGATGTGTGCACCCCCGACAACCTGCAGAAGGTCCTGGAGAGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000574662.1
CDS GCA 72 bp TCTGGCCCGAGCTCTTGTTCTGCAGGTTGTCGGGGGTaGACACATCCTCATCGTACAGGCCGTTCGTGTCCA +
Preference number: 6 (lower is better)
Translates to: SGPSSCSAGCRG*THPHRTGRSCP
Trigger: TGGACACGAACGGCCTGTACGATGAGGATGTGTGCACCCCCGACAACCTGCAGAACAAGAGCTCGGGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563396.1
ENST00000568373.5
CDS CCA 72 bp TGCGGAGGCCTACTGCAGACCCTGAGGAGGGGCCACTaGGACCTTGTTGTCCTTCTCTCTGAAGAAGAGCTG +
Preference number: 6 (lower is better)
Translates to: CGGLLQTLRRGH*DLVVLLSEEEL
Trigger: CAGCTCTTCTTCAGAGAGAAGGACAACAAGGTCCCAGTGGCCCCTCCTCAGGGTCTGCAGTAGGCCTCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219334.10
CDS CAA 72 bp AGGAGGCAGACGTTGGCAGTGGCAAAGCAGAAGCTTTaGCCAGGCCCCGTGCCCTTCCATTCACTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: RRQTLAVAKQKL*PGPVPFHSLSR
Trigger: CCTGCTCAGTGAATGGAAGGGCACGGGGCCTGGCAAAAGCTTCTGCTTTGCCACTGCCAACGTCTGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CAA 72 bp ATCTCCTTGGCCCGCGCTTGGGTGTTAAAAAGGTTGTaGACCCTGGCGAGTGAGTCGGGCAGGAGGCAGACG +
Preference number: 6 (lower is better)
Translates to: ISLARAWVLKRL*TLASESGRRQT
Trigger: CGTCTGCCTCCTGCCCGACTCACTCGCCAGGGTCAACAACCTTTTTAACACCCAAGCGCGGGCCAAGGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CAA 72 bp GCGGCAGGGGTCCCTGTAGTGGGTGAACAGGGAGTGTaGCTGCTCCAGCTTGTCGTCAGAGGAGCAGTTATC +
Preference number: 6 (lower is better)
Translates to: AAGVPVVGEQGV*LLQLVVRGAVI
Trigger: GATAACTGCTCCTCTGACGACAAGCTGGAGCAGCAACACTCCCTGTTCACCCACTACAGGGACCCCTGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000567223.6
ENST00000568373.5
ENST00000574662.1
CDS CAA 72 bp ATGGCAGCTGGCTCGAAGCAAGAGCGCGGCGCCCCGTaGATGGGTGTTACTAGTGGACTCGTCCTTTGTCTG +
Preference number: 6 (lower is better)
Translates to: MAAGSKQERGAP*MGVTSGLVLCL
Trigger: CAGACAAAGGACGAGTCCACTAGTAACACCCATCAACGGGGCGCCGCGCTCTTGCTTCGAGCCAGCTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566009.5
CDS CAA 90 bp ATTCTCTGCCCGATCTCCTTGGCCCGCGCTTGGGTGTTAAAAAGGTaGTTGACCCTGGCGAGTGAGTCGGGCAGGAGGCAGACGTTGGCA +
Preference number: 6 (lower is better)
Translates to: ILCPISLARAWVLKR*LTLASESGRRQTLA
Trigger: TGCCAACGTCTGCCTCCTGCCCGACTCACTCGCCAGGGTCAACAACCTTTTTAACACCCAAGCGCGGGCCAAGGAGATCGGGCAGAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CAA 90 bp CTGAGGGGCTGGTGTCTTTGCGGTTTCTCCCCGGCCGCCTGTTTGTaGGTCTTAAGGCGTCAGCCTCTCACTCATCCAACACTTGGTGTC +
Preference number: 6 (lower is better)
Translates to: LRGWCLCGFSPAACL*VLRRQPLTHPTLGV
Trigger: GACACCAAGTGTTGGATGAGTGAGAGGCTGACGCCTTAAGACCAACAAACAGGCGGCCGGGGAGAAACCGCAAAGACACCAGCCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS TCA 72 bp CCCTCCCGCCCCGCTTCTCCCTCCTCATCTGCCGTGTaGTCTCACCAAGATCCACTTGATTATTTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: PSRPASPSSSAV*SHQDPLDYLLG
Trigger: GCCCAGCAAATAATCAAGTGGATCTTGGTGAGATCACACGGCAGATGAGGAGGGAGAAGCGGGGCGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CCA 72 bp GTCAAACACCTCCTCCTGGCGAGATGCAACTCCGGCTaGTCAATGGCGAATGTTGGCCAGCCGGTCATGGTT +
Preference number: 6 (lower is better)
Translates to: VKHLLLARCNSG*SMANVGQPVMV
Trigger: AACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATCTCGCCAGGAGGAGGTGTTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566723.1
CDS CAA 72 bp CCACAGACGACGTCAAATGCCACCAGCTCCTCGGGGTaGGCTGCGCTGGACGAGGAGGTAGATTTTCGGAAA +
Preference number: 6 (lower is better)
Translates to: PQTTSNATSSSG*AALDEEVDFRK
Trigger: TTTCCGAAAATCTACCTCCTCGTCCAGCGCAGCCAACCCCGAGGAGCTGGTGGCATTTGACGTCGTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000566009.5
ENST00000567223.6
ENST00000567811.1
ENST00000568373.5
ENST00000574662.1
CDS CAA 72 bp GGCTGGTGTCTTTGCGGTTTCTCCCCGGCCGCCTGTTaGTTGGTCTTAAGGCGTCAGCCTCTCACTCATCCA +
Preference number: 6 (lower is better)
Translates to: GWCLCGFSPAAC*LVLRRQPLTHP
Trigger: TGGATGAGTGAGAGGCTGACGCCTTAAGACCAACAAACAGGCGGCCGGGGAGAAACCGCAAAGACACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CCA 72 bp TTGCGGATTCTCTGCCCGATCTCCTTGGCCCGCGCTTaGGTGTTAAAAAGGTTGTTGACCCTGGCGAGTGAG +
Preference number: 6 (lower is better)
Translates to: LRILCPISLARA*VLKRLLTLASE
Trigger: CTCACTCGCCAGGGTCAACAACCTTTTTAACACCCAAGCGCGGGCCAAGGAGATCGGGCAGAGAATCCGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 72 bp ATGGCTACTGGCAGGTGGTCCGTCAGGCCGGACAGCTaGGTGATAAAACTGAATTCTTCCACCTCGGCCTTC +
Preference number: 6 (lower is better)
Translates to: MATGRWSVRPDS*VIKLNSSTSAF
Trigger: GAAGGCCGAGGTGGAAGAATTCAGTTTTATCACCCAGCTGTCCGGCCTGACGGACCACCTGCCAGTAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CAA 72 bp ATGCAGGTGTGTGCAGGCGATGTACCCGACGATTCTTaGGTCCTGAGGTGTGCTTCCCACCTGCACCTTGAG +
Preference number: 6 (lower is better)
Translates to: MQVCAGDVPDDS*VLRCASHLHLE
Trigger: CTCAAGGTGCAGGTGGGAAGCACACCTCAGGACCAAAGAATCGTCGGGTACATCGCCTGCACACACCTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000566009.5
ENST00000567223.6
ENST00000567811.1
ENST00000568373.5
ENST00000574662.1
CDS CAA 72 bp CCGTGCAGCTGCTCTTTCAATTTGGTGGCTGCTCGCTaGTCAAACACCTCCTCCTGGCGAGATGCAACTCCG +
Preference number: 6 (lower is better)
Translates to: PCSCSFNLVAAR*SNTSSWRDATP
Trigger: CGGAGTTGCATCTCGCCAGGAGGAGGTGTTTGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGCTGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566723.1
CDS CAA 90 bp TTGAAATCTCCACAGACGACGTCAAATGCCACCAGCTCCTCGGGGTaGGCTGCGCTGGACGAGGAGGTAGATTTTCGGAAATCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: LKSPQTTSNATSSSG*AALDEEVDFRKSAS
Trigger: GCTGGCTGATTTCCGAAAATCTACCTCCTCGTCCAGCGCAGCCAACCCCGAGGAGCTGGTGGCATTTGACGTCGTCTGTGGAGATTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000566009.5
ENST00000567223.6
ENST00000567811.1
ENST00000568373.5
ENST00000574662.1
CDS CAA 90 bp TTTCTGAGGGGCTGGTGTCTTTGCGGTTTCTCCCCGGCCGCCTGTTaGTTGGTCTTAAGGCGTCAGCCTCTCACTCATCCAACACTTGGT +
Preference number: 6 (lower is better)
Translates to: FLRGWCLCGFSPAAC*LVLRRQPLTHPTLG
Trigger: ACCAAGTGTTGGATGAGTGAGAGGCTGACGCCTTAAGACCAACAAACAGGCGGCCGGGGAGAAACCGCAAAGACACCAGCCCCTCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS GCA 72 bp TTCAATTTGGTGGCTGCTCGCTTGTCAAACACCTCCTaGAGGCACAGGAAGTCCAGGTTGGCGGGGAAGAAG +
Preference number: 6 (lower is better)
Translates to: FNLVAARLSNTS*RHRKSRLAGKK
Trigger: CTTCTTCCCCGCCAACCTGGACTTCCTGTGCCTGCAGGAGGTGTTTGACAAGCGAGCAGCCACCAAATTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS GCA 72 bp GAAGTAGCCGTGCAGCTGCTCTTTCAATTTGGTGGCTaGTCGCTTGTCAAACACCTCCTCCTGGCGAGATGC +
Preference number: 6 (lower is better)
Translates to: EVAVQLLFQFGG*SLVKHLLLARC
Trigger: GCATCTCGCCAGGAGGAGGTGTTTGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGCTGCACGGCTACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566723.1
CDS CCA 72 bp ACTCGAAGTAGCCGTGCAGCTGCTCTTTCAATTTGGTaGCTGCTCGCTTGTCAAACACCTCCTCCTGGCGAG +
Preference number: 6 (lower is better)
Translates to: TRSSRAAALSIW*LLACQTPPPGE
Trigger: CTCGCCAGGAGGAGGTGTTTGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGCTGCACGGCTACTTCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566723.1
CDS CAA 72 bp CTCACCAAGATCCACTTGATTATTTGCTGGGCCTCATaGATTCCTGGCTCGTGGCCTTGGGAGCCGCAGAGC +
Preference number: 6 (lower is better)
Translates to: LTKIHLIICWAS*IPGSWPWEPQS
Trigger: GCTCTGCGGCTCCCAAGGCCACGAGCCAGGAATCAATGAGGCCCAGCAAATAATCAAGTGGATCTTGGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CAA 72 bp TGGTGTCTTTGCGGTTTCTCCCCGGCCGCCTGTTTGTaGGTCTTAAGGCGTCAGCCTCTCACTCATCCAACA +
Preference number: 6 (lower is better)
Translates to: WCLCGFSPAACL*VLRRQPLTHPT
Trigger: TGTTGGATGAGTGAGAGGCTGACGCCTTAAGACCAACAAACAGGCGGCCGGGGAGAAACCGCAAAGACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS TCA 72 bp GGAGCCCGGCCTCACCAGAGGAGCAGTTATCAAAGTTaGAATCTCCACAGACGACGTCAAATGCCACCAGCT +
Preference number: 6 (lower is better)
Translates to: GARPHQRSSYQS*NLHRRRQMPPA
Trigger: AGCTGGTGGCATTTGACGTCGTCTGTGGAGATTTCAACTTTGATAACTGCTCCTCTGGTGAGGCCGGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567811.1
CDS GCA 72 bp GAAGTAGCCGTGCAGCTGCTCTTTCAATTTGGTGGCTaGTCGCTTGTCAAACACCTCCTGCAGGCACAGGAA +
Preference number: 6 (lower is better)
Translates to: EVAVQLLFQFGG*SLVKHLLQAQE
Trigger: TTCCTGTGCCTGCAGGAGGTGTTTGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGCTGCACGGCTACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS GCA 72 bp GTTATCAAAGTTGAAATCTCCACAGACGACGTCAAATaGCACCAGCTCCTCGGGGTTGGCTGCGCTGGACGA +
Preference number: 6 (lower is better)
Translates to: VIKVEISTDDVK*HQLLGVGCAGR
Trigger: TCGTCCAGCGCAGCCAACCCCGAGGAGCTGGTGGCATTTGACGTCGTCTGTGGAGATTTCAACTTTGATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000566009.5
ENST00000567223.6
ENST00000567811.1
ENST00000568373.5
ENST00000574662.1
CDS CCA 72 bp ACTCGAAGTAGCCGTGCAGCTGCTCTTTCAATTTGGTaGCTGCTCGCTTGTCAAACACCTCCTGCAGGCACA +
Preference number: 6 (lower is better)
Translates to: TRSSRAAALSIW*LLACQTPPAGT
Trigger: TGTGCCTGCAGGAGGTGTTTGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGCTGCACGGCTACTTCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 72 bp TGTACTCGAAGTAGCCGTGCAGCTGCTCTTTCAATTTaGTGGCTGCTCGCTTGTCAAACACCTCCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: CTRSSRAAALSI*WLLACQTPPAG
Trigger: GCCTGCAGGAGGTGTTTGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGCTGCACGGCTACTTCGAGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 72 bp GATAAAACTGAATTCTTCCACCTCGGCCTTCCAGTCTaGGCACAGCCCCTCCTCTGCATGCAGCATGTAGTC +
Preference number: 6 (lower is better)
Translates to: DKTEFFHLGLPV*AQPLLCMQHVV
Trigger: GACTACATGCTGCATGCAGAGGAGGGGCTGTGCCCAGACTGGAAGGCCGAGGTGGAAGAATTCAGTTTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000568373.5
CDS CCA 72 bp GATCCACTTGATTATTTGCTGGGCCTCATTGATTCCTaGCTCGTGGCCTTGGGAGCCGCAGAGCCTTGTGTT +
Preference number: 6 (lower is better)
Translates to: DPLDYLLGLIDS*LVALGAAEPCV
Trigger: AACACAAGGCTCTGCGGCTCCCAAGGCCACGAGCCAGGAATCAATGAGGCCCAGCAAATAATCAAGTGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CCA 72 bp TGTACTCGAAGTAGCCGTGCAGCTGCTCTTTCAATTTaGTGGCTGCTCGCTTGTCAAACACCTCCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: CTRSSRAAALSI*WLLACQTPPPG
Trigger: GCCAGGAGGAGGTGTTTGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGCTGCACGGCTACTTCGAGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566723.1
CDS CAA 90 bp CCGTGTGATCTCACCAAGATCCACTTGATTATTTGCTGGGCCTCATaGATTCCTGGCTCGTGGCCTTGGGAGCCGCAGAGCCTTGTGTTT +
Preference number: 6 (lower is better)
Translates to: PCDLTKIHLIICWAS*IPGSWPWEPQSLVF
Trigger: AAACACAAGGCTCTGCGGCTCCCAAGGCCACGAGCCAGGAATCAATGAGGCCCAGCAAATAATCAAGTGGATCTTGGTGAGATCACACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CCA 72 bp ATTTGCTGGGCCTCATTGATTCCTGGCTCGTGGCCTTaGGAGCCGCAGAGCCTTGTGTTTCTCTTGCAAAAA +
Preference number: 6 (lower is better)
Translates to: ICWASLIPGSWP*EPQSLVFLLQK
Trigger: TTTTTGCAAGAGAAACACAAGGCTCTGCGGCTCCCAAGGCCACGAGCCAGGAATCAATGAGGCCCAGCAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CCA 72 bp CCGTGTGATCTCACCAAGATCCACTTGATTATTTGCTaGGCCTCATTGATTCCTGGCTCGTGGCCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: PCDLTKIHLIIC*ASLIPGSWPWE
Trigger: CTCCCAAGGCCACGAGCCAGGAATCAATGAGGCCCAGCAAATAATCAAGTGGATCTTGGTGAGATCACACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CAA 72 bp TATTTGCTGGGCCTCATTGATTCCTGGCTCGTGGCCTaGGGAGCCGCAGAGCCTTGTGTTTCTCTTGCAAAA +
Preference number: 6 (lower is better)
Translates to: YLLGLIDSWLVA*GAAEPCVSLAK
Trigger: TTTTGCAAGAGAAACACAAGGCTCTGCGGCTCCCAAGGCCACGAGCCAGGAATCAATGAGGCCCAGCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CAA 90 bp CCACTTGATTATTTGCTGGGCCTCATTGATTCCTGGCTCGTGGCCTaGGGAGCCGCAGAGCCTTGTGTTTCTCTTGCAAAAACAAGCAAT +
Preference number: 6 (lower is better)
Translates to: PLDYLLGLIDSWLVA*GAAEPCVSLAKTSN
Trigger: ATTGCTTGTTTTTGCAAGAGAAACACAAGGCTCTGCGGCTCCCAAGGCCACGAGCCAGGAATCAATGAGGCCCAGCAAATAATCAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS TCA 72 bp GCTCCAGCTTGTCGTCAGAGGAGCAGTTATCAAAGTTaGAATCTCCACAGACGACGTCAAATGCCACCAGCT +
Preference number: 6 (lower is better)
Translates to: APACRQRSSYQS*NLHRRRQMPPA
Trigger: AGCTGGTGGCATTTGACGTCGTCTGTGGAGATTTCAACTTTGATAACTGCTCCTCTGACGACAAGCTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219334.10
ENST00000563226.1
ENST00000567223.6
ENST00000568373.5
ENST00000574662.1
CDS TCA 72 bp TGCAAAAACAAGCAATCACACGAAAGGCTGTGCCTTTaGGTCCTGGCGGGCAAAGACTTGAGAAACAGAGCT +
Preference number: 6 (lower is better)
Translates to: CKNKQSHERLCL*VLAGKDLRNRA
Trigger: AGCTCTGTTTCTCAAGTCTTTGCCCGCCAGGACTCAAAGGCACAGCCTTTCGTGTGATTGCTTGTTTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CAA 72 bp TTGCAAAAACAAGCAATCACACGAAAGGCTGTGCCTTaGAGTCCTGGCGGGCAAAGACTTGAGAAACAGAGC +
Preference number: 6 (lower is better)
Translates to: LQKQAITRKAVP*SPGGQRLEKQS
Trigger: GCTCTGTTTCTCAAGTCTTTGCCCGCCAGGACTCAAAGGCACAGCCTTTCGTGTGATTGCTTGTTTTTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563455.1
CDS CAA 90 bp GTGTTTCTCTTGCAAAAACAAGCAATCACACGAAAGGCTGTGCCTTaGAGTCCTGGCGGGCAAAGACTTGAGAAACAGAGCTCCCTTAGA +
Preference number: 6 (lower is better)
Translates to: VFLLQKQAITRKAVP*SPGGQRLEKQSSLR
Trigger: TCTAAGGGAGCTCTGTTTCTCAAGTCTTTGCCCGCCAGGACTCAAAGGCACAGCCTTTCGTGTGATTGCTTGTTTTTGCAAGAGAAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563455.1