Pregenerated sensors for SMPD2 (Homo sapiens)
Ensembl gene IDs: ENSG00000135587Ensembl transcript IDs: ENST00000258052.8, ENST00000439615.1, ENST00000458487.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAAATCCGGGCGCCCAGGCTCGGTAAGGGCCGCGCGCTAGGACCCTaGGGGTCCGGAGAGCGCCCCCGGGTGGGCGGCTCCCGGTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: EIRAPRLGKGRALGP*GSGERPRVGGSRFL Trigger: AAGGAACCGGGAGCCGCCCACCCGGGGGCGCTCTCCGGACCCCCAGGGTCCTAGCGCGCGGCCCTTACCGAGCCTGGGCGCCCGGATTTC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS CCA 90 bp | TTCCTTCTTCGCAGGCGGCGCGCACAGGTGGGCACCAAGCCCGCGTaGCTCAGGTCGGGCCCGACTCCCGCGTTCCCCCGGCAACCGGCC | + |
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Preference number: 5 (lower is better) Translates to: FLLRRRRAQVGTKPA*LRSGPTPAFPRQPA Trigger: GGCCGGTTGCCGGGGGAACGCGGGAGTCGGGCCCGACCTGAGCCACGCGGGCTTGGTGCCCACCTGTGCGCGCCGCCTGCGAAGAAGGAA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS CCA 90 bp | GCCTTCTCCCCAGACCGTTCCTTCTTCGCAGGCGGCGCGCACAGGTaGGCACCAAGCCCGCGTGGCTCAGGTCGGGCCCGACTCCCGCGT | + |
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Preference number: 5 (lower is better) Translates to: AFSPDRSFFAGGAHR*APSPRGSGRARLPR Trigger: ACGCGGGAGTCGGGCCCGACCTGAGCCACGCGGGCTTGGTGCCCACCTGTGCGCGCCGCCTGCGAAGAAGGAACGGTCTGGGGAGAAGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS CCA 90 bp | GAGGTTGAAGATCCGCAGTCGCAGGGAGAAGTTGGGCTTCATGGTTaGGGAGCTCCAGGGGCGCTAGGCGGCTCGAACTCTCCAGCGACG | + |
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Preference number: 5 (lower is better) Translates to: EVEDPQSQGEVGLHG*GAPGALGGSNSPAT Trigger: CGTCGCTGGAGAGTTCGAGCCGCCTAGCGCCCCTGGAGCTCCCCAACCATGAAGCCCAACTTCTCCCTGCGACTGCGGATCTTCAACCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS CCA 90 bp | TGCTCACTCCACACCTCCTCCAGCAAAGCCAGGTCGAAGCTCTCCTaGTTCAGAAAGTCTCCCAGGCGCCTCATGCGGTCGGCCCGGTGC | + |
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Preference number: 5 (lower is better) Translates to: CSLHTSSSKARSKLS*FRKSPRRLMRSARC Trigger: GCACCGGGCCGACCGCATGAGGCGCCTGGGAGACTTTCTGAACCAGGAGAGCTTCGACCTGGCTTTGCTGGAGGAGGTGTGGAGTGAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS GCA 90 bp | CCAGGTCGAAGCTCTCCTGGTTCAGAAAGTCTCCCAGGCGCCTCATaGGGTCGGCCCGGTGCTTGCTCAAGTACGGAATGCCCCAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: PGRSSPGSESLPGAS*GRPGACSSTECPSS Trigger: ACTGCTGGGGCATTCCGTACTTGAGCAAGCACCGGGCCGACCGCATGAGGCGCCTGGGAGACTTTCTGAACCAGGAGAGCTTCGACCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS TCA 90 bp | AGCCCTAGGCACTGCCAGCTTCACTCACATGGGTCACATAGGCGTTaGGCACCATGCCACTTAGATGGAGCACCAGCAGCCCCACAGCCT | + |
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Preference number: 5 (lower is better) Translates to: SPRHCQLHSHGSHRR*APCHLDGAPAAPQP Trigger: AGGCTGTGGGGCTGCTGGTGCTCCATCTAAGTGGCATGGTGCTCAACGCCTATGTGACCCATGTGAGTGAAGCTGGCAGTGCCTAGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439615.1 |
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| CDS TCA 90 bp | GCCAATGATTCCGCTCCGGAAGTGGTGTGCAGCTGGGTAGGTAGGTaGCAGCTTCTGTCTCAGGTACTGGAAGTCCTGCTCACTCCACAC | + |
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Preference number: 5 (lower is better) Translates to: ANDSAPEVVCSWVGR*QLLSQVLEVLLTPH Trigger: GTGTGGAGTGAGCAGGACTTCCAGTACCTGAGACAGAAGCTGTCACCTACCTACCCAGCTGCACACCACTTCCGGAGCGGAATCATTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS TCA 90 bp | GGTCCCATCCCACTTCCCATTTCAAGCCCAGGCTCACACACTGGATaGACTGGGCCAATTCCCAAGCTTGGGCCACACGATGTGCTAGGT | + |
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Preference number: 5 (lower is better) Translates to: GPIPLPISSPGSHTG*TGPIPKLGPHDVLG Trigger: ACCTAGCACATCGTGTGGCCCAAGCTTGGGAATTGGCCCAGTTCATCCAGTGTGTGAGCCTGGGCTTGAAATGGGAAGTGGGATGGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458487.1 |
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| CDS TCA 90 bp | AGTCAATGCGGACACCAAAGGGAAATGGCTTCAGCTCCTGCTGGCTaGCGTAGCAGTTCTTGGGTACCATTGTGTTGCCTTCCTCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: SQCGHQREMASAPAG*RSSSWVPLCCLPQS Trigger: GCTCTGAGGAAGGCAACACAATGGTACCCAAGAACTGCTACGTCAGCCAGCAGGAGCTGAAGCCATTTCCCTTTGGTGTCCGCATTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000258052.8 ENST00000458487.1 |
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| CDS CCA 90 bp | GGGGTAGCCATTGAGAGTGTAGATGTGCTGGGTAAGCTCCTGGATTaGATGTTTGGAGAAGACACAGAGGCCACTGCCAATGATTCCGCT | + |
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Preference number: 5 (lower is better) Translates to: GVAIESVDVLGKLLD*MFGEDTEATANDSA Trigger: AGCGGAATCATTGGCAGTGGCCTCTGTGTCTTCTCCAAACATCCAATCCAGGAGCTTACCCAGCACATCTACACTCTCAATGGCTACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000258052.8 ENST00000439615.1 |
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| CDS CCA 90 bp | AACTGCCTTGTAAAGCACGTAGTCAATGCGGACACCAAAGGGAAATaGCTTCAGCTCCTGCTGGCTGACGTAGCAGTTCTTGGGTACCAT | + |
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Preference number: 5 (lower is better) Translates to: NCLVKHVVNADTKGK*LQLLLADVAVLGYH Trigger: ATGGTACCCAAGAACTGCTACGTCAGCCAGCAGGAGCTGAAGCCATTTCCCTTTGGTGTCCGCATTGACTACGTGCTTTACAAGGCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000258052.8 ENST00000458487.1 |
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| CDS GCA 90 bp | GTGTCTGTCACTTGGCATGGTGTTTGGTATACAATGGATAAGCCTTaGCCATTGCTTCCTTATAAGATCTTGCCCCCACACCTCATCCCC | + |
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Preference number: 5 (lower is better) Translates to: VSVTWHGVWYTMDKP*PLLPYKILPPHLIP Trigger: GGGGATGAGGTGTGGGGGCAAGATCTTATAAGGAAGCAATGGGCAAGGCTTATCCATTGTATACCAAACACCATGCCAAGTGACAGACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000439615.1 |
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| CDS GCA 90 bp | GGTATACAATGGATAAGCCTTGCCCATTGCTTCCTTATAAGATCTTaGCCCCACACCTCATCCCCAGGTATGAGAGCTAGAGAAGTACCA | + |
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Preference number: 5 (lower is better) Translates to: GIQWISLAHCFLIRS*PHTSSPGMRAREVP Trigger: TGGTACTTCTCTAGCTCTCATACCTGGGGATGAGGTGTGGGGGCAAGATCTTATAAGGAAGCAATGGGCAAGGCTTATCCATTGTATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439615.1 |
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| CDS GCA 90 bp | TCACTTGGCATGGTGTTTGGTATACAATGGATAAGCCTTGCCCATTaGTTCCTTATAAGATCTTGCCCCCACACCTCATCCCCAGGTATG | + |
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Preference number: 5 (lower is better) Translates to: SLGMVFGIQWISLAH*FLIRSCPHTSSPGM Trigger: CATACCTGGGGATGAGGTGTGGGGGCAAGATCTTATAAGGAAGCAATGGGCAAGGCTTATCCATTGTATACCAAACACCATGCCAAGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000439615.1 |
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| CDS CCA 90 bp | GAATCAAGCCTGTGTCTGTCACTTGGCATGGTGTTTGGTATACAATaGATAAGCCTTGCCCATTGCTTCCTTATAAGATCTTGCCCCCAC | + |
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Preference number: 5 (lower is better) Translates to: ESSLCLSLGMVFGIQ*ISLAHCFLIRSCPH Trigger: GTGGGGGCAAGATCTTATAAGGAAGCAATGGGCAAGGCTTATCCATTGTATACCAAACACCATGCCAAGTGACAGACACAGGCTTGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000439615.1 |
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| CDS CCA 72 bp | CGCAGGCGGCGCGCACAGGTGGGCACCAAGCCCGCGTaGCTCAGGTCGGGCCCGACTCCCGCGTTCCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: RRRRAQVGTKPA*LRSGPTPAFPR Trigger: CCGGGGGAACGCGGGAGTCGGGCCCGACCTGAGCCACGCGGGCTTGGTGCCCACCTGTGCGCGCCGCCTGCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS CCA 72 bp | CCAGACCGTTCCTTCTTCGCAGGCGGCGCGCACAGGTaGGCACCAAGCCCGCGTGGCTCAGGTCGGGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: PDRSFFAGGAHR*APSPRGSGRAR Trigger: TCGGGCCCGACCTGAGCCACGCGGGCTTGGTGCCCACCTGTGCGCGCCGCCTGCGAAGAAGGAACGGTCTGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS CCA 72 bp | GGTAGAATGCACCTGCCCACAGCACCAGCCCTACACTaGGGGTCCAGAGCAGTATGGCAGCTTCCCCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: GRMHLPTAPALH*GSRAVWQLPRP Trigger: GGGCCGGGGAAGCTGCCATACTGCTCTGGACCCCCAGTGTAGGGCTGGTGCTGTGGGCAGGTGCATTCTACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS CCA 72 bp | GATCCGCAGTCGCAGGGAGAAGTTGGGCTTCATGGTTaGGGAGCTCCAGGGGCGCTAGGCGGCTCGAACTCT | + |
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Preference number: 6 (lower is better) Translates to: DPQSQGEVGLHG*GAPGALGGSNS Trigger: AGAGTTCGAGCCGCCTAGCGCCCCTGGAGCTCCCCAACCATGAAGCCCAACTTCTCCCTGCGACTGCGGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS CAA 72 bp | AGATCCGCAGTCGCAGGGAGAAGTTGGGCTTCATGGTaGGGGAGCTCCAGGGGCGCTAGGCGGCTCGAACTC | + |
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Preference number: 6 (lower is better) Translates to: RSAVAGRSWASW*GSSRGARRLEL Trigger: GAGTTCGAGCCGCCTAGCGCCCCTGGAGCTCCCCAACCATGAAGCCCAACTTCTCCCTGCGACTGCGGATCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS GCA 72 bp | AGAAAGTCTCCCAGGCGCCTCATGCGGTCGGCCCGGTaGTTGCTCAAGTACGGAATGCCCCAGCAGTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RKSPRRLMRSAR*LLKYGMPQQLR Trigger: CCTCAACTGCTGGGGCATTCCGTACTTGAGCAAGCACCGGGCCGACCGCATGAGGCGCCTGGGAGACTTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS CAA 72 bp | AAGTCTCCCAGGCGCCTCATGCGGTCGGCCCGGTGCTaGCTCAAGTACGGAATGCCCCAGCAGTTGAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: KSPRRLMRSARC*LKYGMPQQLRL Trigger: CAACCTCAACTGCTGGGGCATTCCGTACTTGAGCAAGCACCGGGCCGACCGCATGAGGCGCCTGGGAGACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS GCA 72 bp | AGCTCTCCTGGTTCAGAAAGTCTCCCAGGCGCCTCATaGGGTCGGCCCGGTGCTTGCTCAAGTACGGAATGC | + |
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Preference number: 6 (lower is better) Translates to: SSPGSESLPGAS*GRPGACSSTEC Trigger: GCATTCCGTACTTGAGCAAGCACCGGGCCGACCGCATGAGGCGCCTGGGAGACTTTCTGAACCAGGAGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS TCA 72 bp | GCCTTCTTGGATGTGTGGCTGGGGGAACCAGGTTGGTaGGGCGGGAGTTCTTCCATCACCAGCTCTTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: AFLDVWLGEPGW*GGSSSITSSSP Trigger: TGGGGAAGAGCTGGTGATGGAAGAACTCCCGCCTCACCAACCTGGTTCCCCCAGCCACACATCCAAGAAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000458487.1 |
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| CDS CAA 90 bp | CAGAACCACGTCTGCCTTCTTGGATGTGTGGCTGGGGGAACCAGGTaGGTGAGGCGGGAGTTCTTCCATCACCAGCTCTTCCCCATGACT | + |
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Preference number: 6 (lower is better) Translates to: QNHVCLLGCVAGGTR*VRREFFHHQLFPMT Trigger: AGTCATGGGGAAGAGCTGGTGATGGAAGAACTCCCGCCTCACCAACCTGGTTCCCCCAGCCACACATCCAAGAAGGCAGACGTGGTTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000458487.1 |
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| CDS TCA 72 bp | TCCGCTCCGGAAGTGGTGTGCAGCTGGGTAGGTAGGTaGCAGCTTCTGTCTCAGGTACTGGAAGTCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SAPEVVCSWVGR*QLLSQVLEVLL Trigger: GAGCAGGACTTCCAGTACCTGAGACAGAAGCTGTCACCTACCTACCCAGCTGCACACCACTTCCGGAGCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS GCA 72 bp | ATTGACCTCCTGTACGTGGAAGAGGTAGAATGCACCTaGCCACAGCACCAGCCCTACACTGGGGGTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: IDLLYVEEVECT*PQHQPYTGGPE Trigger: CTCTGGACCCCCAGTGTAGGGCTGGTGCTGTGGGCAGGTGCATTCTACCTCTTCCACGTACAGGAGGTCAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS CAA 72 bp | GTCTGCCTTCTTGGATGTGTGGCTGGGGGAACCAGGTaGGTGAGGCGGGAGTTCTTCCATCACCAGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VCLLGCVAGGTR*VRREFFHHQLF Trigger: GAAGAGCTGGTGATGGAAGAACTCCCGCCTCACCAACCTGGTTCCCCCAGCCACACATCCAAGAAGGCAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000458487.1 |
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| CDS CCA 72 bp | TCCCTTGCCCTTCCTAGCACATGCTGGAGCTCAGCCTaGGCCCTATATAAGCCATTGACCTCCTGTACGTGG | + |
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Preference number: 6 (lower is better) Translates to: SLALPSTCWSSA*ALYKPLTSCTW Trigger: CCACGTACAGGAGGTCAATGGCTTATATAGGGCCCAGGCTGAGCTCCAGCATGTGCTAGGAAGGGCAAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS CCA 72 bp | ACAACAGAACCACGTCTGCCTTCTTGGATGTGTGGCTaGGGGAACCAGGTTGGTGAGGCGGGAGTTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: TTEPRLPSWMCG*GNQVGEAGVLP Trigger: TGGAAGAACTCCCGCCTCACCAACCTGGTTCCCCCAGCCACACATCCAAGAAGGCAGACGTGGTTCTGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458487.1 |
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| CDS GCA 72 bp | GTGCATGTTGAGGTCTCCACACAACAGAACCACGTCTaGCTTCTTGGATGTGTGGCTGGGGGAACCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: VHVEVSTQQNHV*LLGCVAGGTRL Trigger: CAACCTGGTTCCCCCAGCCACACATCCAAGAAGGCAGACGTGGTTCTGTTGTGTGGAGACCTCAACATGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000458487.1 |
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| CDS CCA 72 bp | TCCCATTTCAAGCCCAGGCTCACACACTGGATGAACTaGGCCAATTCCCAAGCTTGGGCCACACGATGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SHFKPRLTHWMN*ANSQAWATRCA Trigger: AGCACATCGTGTGGCCCAAGCTTGGGAATTGGCCCAGTTCATCCAGTGTGTGAGCCTGGGCTTGAAATGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458487.1 |
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| CDS TCA 72 bp | GATTGTATTCGGCATGGAGATGGGTCACATAGGCGTTaGGCACCATGCCACTTAGATGGAGCACCAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: DCIRHGDGSHRR*APCHLDGAPAA Trigger: GGCTGCTGGTGCTCCATCTAAGTGGCATGGTGCTCAACGCCTATGTGACCCATCTCCATGCCGAATACAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS TCA 72 bp | GGACACCAAAGGGAAATGGCTTCAGCTCCTGCTGGCTaGCGTAGCAGTTCTTGGGTACCATTGTGTTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: GHQREMASAPAG*RSSSWVPLCCL Trigger: AAGGCAACACAATGGTACCCAAGAACTGCTACGTCAGCCAGCAGGAGCTGAAGCCATTTCCCTTTGGTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000258052.8 ENST00000458487.1 |
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| CDS GCA 72 bp | GTGCATGTTGAGGTCTCCACACAACAGAACCACGTCTaGCTTCTTGGATGTGTGGTGGATGAACTGGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: VHVEVSTQQNHV*LLGCVVDELGQ Trigger: TTGGCCCAGTTCATCCACCACACATCCAAGAAGGCAGACGTGGTTCTGTTGTGTGGAGACCTCAACATGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258052.8 |
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| CDS CCA 72 bp | GTAAAGCACGTAGTCAATGCGGACACCAAAGGGAAATaGCTTCAGCTCCTGCTGGCTGACGTAGCAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VKHVVNADTKGK*LQLLLADVAVL Trigger: AAGAACTGCTACGTCAGCCAGCAGGAGCTGAAGCCATTTCCCTTTGGTGTCCGCATTGACTACGTGCTTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000258052.8 ENST00000458487.1 |
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| CDS GCA 72 bp | TGGATAAGCCTTGCCCATTGCTTCCTTATAAGATCTTaGCCCCACACCTCATCCCCAGGTATGAGAGCTAGA | + |
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Preference number: 6 (lower is better) Translates to: WISLAHCFLIRS*PHTSSPGMRAR Trigger: TCTAGCTCTCATACCTGGGGATGAGGTGTGGGGGCAAGATCTTATAAGGAAGCAATGGGCAAGGCTTATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439615.1 |
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| CDS GCA 72 bp | AAAACCCAGAAACTGCCTTGTAAAGCACGTAGTCAATaGGGACACCAAAGGGAAATGGCTTCAGCTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: KTQKLPCKARSQ*GHQREMASAPA Trigger: AGCAGGAGCTGAAGCCATTTCCCTTTGGTGTCCGCATTGACTACGTGCTTTACAAGGCAGTTTCTGGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000258052.8 ENST00000458487.1 |
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| CDS CCA 72 bp | ATTGAGAGTGTAGATGTGCTGGGTAAGCTCCTGGATTaGATGTTTGGAGAAGACACAGAGGCCACTGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: IESVDVLGKLLD*MFGEDTEATAN Trigger: ATTGGCAGTGGCCTCTGTGTCTTCTCCAAACATCCAATCCAGGAGCTTACCCAGCACATCTACACTCTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000258052.8 ENST00000439615.1 |
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| CDS CAA 90 bp | GTCACTTGGCATGGTGTTTGGTATACAATGGATAAGCCTTGCCCATaGCTTCCTTATAAGATCTTGCCCCCACACCTCATCCCCAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: VTWHGVWYTMDKPCP*LPYKILPPHLIPRY Trigger: ATACCTGGGGATGAGGTGTGGGGGCAAGATCTTATAAGGAAGCAATGGGCAAGGCTTATCCATTGTATACCAAACACCATGCCAAGTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000439615.1 |
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| CDS CCA 72 bp | CTGTGTCTGTCACTTGGCATGGTGTTTGGTATACAATaGATAAGCCTTGCCCATTGCTTCCTTATAAGATCT | + |
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Preference number: 6 (lower is better) Translates to: LCLSLGMVFGIQ*ISLAHCFLIRS Trigger: AGATCTTATAAGGAAGCAATGGGCAAGGCTTATCCATTGTATACCAAACACCATGCCAAGTGACAGACACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439615.1 |
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