RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMIM12 (Homo sapiens)

Ensembl gene IDs: ENSG00000163866

Ensembl transcript IDs: ENST00000417239.1, ENST00000423898.1, ENST00000426886.1, ENST00000446026.1, ENST00000456842.1, ENST00000521580.3

Found 565 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTTTCACTCAGCGGCAGTCCCACCAGCCTGGAGCCCTGGGGAGCTaGCCAGAGTCAAAAGGCTCCCTGGCAGGCTTGTTCTGGCAGCTG +
Preference number: 1 (lower is better)
Translates to: CFTQRQSHQPGALGS*PESKGSLAGLFWQL
Trigger: CAGCTGCCAGAACAAGCCTGCCAGGGAGCCTTTTGACTCTGGTCAGCTCCCCAGGGCTCCAGGCTGGTGGGACTGCCGCTGAGTGAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 90 bp AGCCCAGGCAGCGGTCAGCCAGGTCTCCCATGCAGAAAATCCGGATaGCCTGGGTTTGCTCCTCTCCAGGGATCCTCTCCAGGGATGGAT +
Preference number: 1 (lower is better)
Translates to: SPGSGQPGLPCRKSG*PGFAPLQGSSPGMD
Trigger: ATCCATCCCTGGAGAGGATCCCTGGAGAGGAGCAAACCCAGGCCATCCGGATTTTCTGCATGGGAGACCTGGCTGACCGCTGCCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 90 bp TCCCTCCTCTCAGGCCACCACCAGGTCCTGGAAGGCACCTCCAGCTaGCACCTCTTCACAGCTGGCCCCTCTAACTGTTCAGGAACTCCA +
Preference number: 1 (lower is better)
Translates to: SLLSGHHQVLEGTSS*HLFTAGPSNCSGTP
Trigger: TGGAGTTCCTGAACAGTTAGAGGGGCCAGCTGTGAAGAGGTGCCAGCTGGAGGTGCCTTCCAGGACCTGGTGGTGGCCTGAGAGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 90 bp GTGAGACTTGAAAGCAGCCCAGGCAGCGGTCAGCCAGGTCTCCCATaGAGAAAATCCGGATGGCCTGGGTTTGCTCCTCTCCAGGGATCC +
Preference number: 1 (lower is better)
Translates to: VRLESSPGSGQPGLP*RKSGWPGFAPLQGS
Trigger: GGATCCCTGGAGAGGAGCAAACCCAGGCCATCCGGATTTTCTGCATGGGAGACCTGGCTGACCGCTGCCTGGGCTGCTTTCAAGTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 90 bp ACTGCAGGCTTGGTAATGCCCAGGACTGCCATAGGGTGGCAGCACTaGTGTGCCGATAAGGCCTGCTCATCAGCCAGAACCTGCAGCCAG +
Preference number: 1 (lower is better)
Translates to: TAGLVMPRTAIGWQH*CADKACSSARTCSQ
Trigger: CTGGCTGCAGGTTCTGGCTGATGAGCAGGCCTTATCGGCACACCAGTGCTGCCACCCTATGGCAGTCCTGGGCATTACCAAGCCTGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 90 bp AGATCCTGTATTCAGGGAGACACAACTGGTACCAGGCCCACCCTCTaGCATGCTGGCTCCCCTCTCAGAGCCAGGCTAGGTCAGGAAGAG +
Preference number: 1 (lower is better)
Translates to: RSCIQGDTTGTRPTL*HAGSPLRARLGQEE
Trigger: CTCTTCCTGACCTAGCCTGGCTCTGAGAGGGGAGCCAGCATGGCAGAGGGTGGGCCTGGTACCAGTTGTGTCTCCCTGAATACAGGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 90 bp AGGGAAGTGACTGCAGGCTTGGTAATGCCCAGGACTGCCATAGGGTaGCAGCACTGGTGTGCCGATAAGGCCTGCTCATCAGCCAGAACC +
Preference number: 1 (lower is better)
Translates to: REVTAGLVMPRTAIG*QHWCADKACSSART
Trigger: GGTTCTGGCTGATGAGCAGGCCTTATCGGCACACCAGTGCTGCCACCCTATGGCAGTCCTGGGCATTACCAAGCCTGCAGTCACTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 90 bp TTCCATGATGTTTCACTCAGCGGCAGTCCCACCAGCCTGGAGCCCTaGGGAGCTGACCAGAGTCAAAAGGCTCCCTGGCAGGCTTGTTCT +
Preference number: 1 (lower is better)
Translates to: FHDVSLSGSPTSLEP*GADQSQKAPWQACS
Trigger: AGAACAAGCCTGCCAGGGAGCCTTTTGACTCTGGTCAGCTCCCCAGGGCTCCAGGCTGGTGGGACTGCCGCTGAGTGAAACATCATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 90 bp AAGGCTAATTCCATGATGTTTCACTCAGCGGCAGTCCCACCAGCCTaGAGCCCTGGGGAGCTGACCAGAGTCAAAAGGCTCCCTGGCAGG +
Preference number: 1 (lower is better)
Translates to: KANSMMFHSAAVPPA*SPGELTRVKRLPGR
Trigger: CCTGCCAGGGAGCCTTTTGACTCTGGTCAGCTCCCCAGGGCTCCAGGCTGGTGGGACTGCCGCTGAGTGAAACATCATGGAATTAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 90 bp CCCAGGACTGCCATAGGGTGGCAGCACTGGTGTGCCGATAAGGCCTaGTCATCAGCCAGAACCTGCAGCCAGAACCAGAAATCTCCTTAC +
Preference number: 1 (lower is better)
Translates to: PRTAIGWQHWCADKA*SSARTCSQNQKSPY
Trigger: GTAAGGAGATTTCTGGTTCTGGCTGCAGGTTCTGGCTGATGAGCAGGCCTTATCGGCACACCAGTGCTGCCACCCTATGGCAGTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 90 bp TCCCAGTGCAGAAGACTAGGTAAAATCAGGAACCAGCCACTGGCCTaGGAACCTACAGTGAGGGGAGAGACCAGGCTGATGGGCTCTGGG +
Preference number: 1 (lower is better)
Translates to: SQCRRLGKIRNQPLA*EPTVRGETRLMGSG
Trigger: CCCAGAGCCCATCAGCCTGGTCTCTCCCCTCACTGTAGGTTCCCAGGCCAGTGGCTGGTTCCTGATTTTACCTAGTCTTCTGCACTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR TCA 90 bp TTCAGAGGGGCACTCACCTTGACTCCCTCTGTCACAAGCCAGCCCTaGCCACAGTGTAACTACAAAAAGGGAGAGTGGGCCCATGTCCCC +
Preference number: 1 (lower is better)
Translates to: FRGALTLTPSVTSQP*PQCNYKKGEWAHVP
Trigger: GGGGACATGGGCCCACTCTCCCTTTTTGTAGTTACACTGTGGTCAGGGCTGGCTTGTGACAGAGGGAGTCAAGGTGAGTGCCCCTCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 90 bp TCAAGAGTCCTTCATCTCCCTTCCCACTGCAGTGAAGCCAGGAGCTaGGCTGTGCAACTGAGAGGAGTGGGGAGCAGGTATTCGGTTCTG +
Preference number: 1 (lower is better)
Translates to: SRVLHLPSHCSEARS*AVQLRGVGSRYSVL
Trigger: CAGAACCGAATACCTGCTCCCCACTCCTCTCAGTTGCACAGCCCAGCTCCTGGCTTCACTGCAGTGGGAAGGGAGATGAAGGACTCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR TCA 90 bp TCATATTCTGAGTTCAAGAGTCCTTCATCTCCCTTCCCACTGCAGTaGAGCCAGGAGCTGGGCTGTGCAACTGAGAGGAGTGGGGAGCAG +
Preference number: 1 (lower is better)
Translates to: SYSEFKSPSSPFPLQ*SQELGCATERSGEQ
Trigger: CTGCTCCCCACTCCTCTCAGTTGCACAGCCCAGCTCCTGGCTTCACTGCAGTGGGAAGGGAGATGAAGGACTCTTGAACTCAGAATATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR GCA 90 bp TTCGGTTCTGATGCCCAGAGTGGCTGTCCCCACCATTTCTCCTTCTaGCCCAGCACTGAAAAGAATCCTGCAGAGCTTCACAGCCTGTCT +
Preference number: 1 (lower is better)
Translates to: FGSDAQSGCPHHFSF*PSTEKNPAELHSLS
Trigger: AGACAGGCTGTGAAGCTCTGCAGGATTCTTTTCAGTGCTGGGGCAGAAGGAGAAATGGTGGGGACAGCCACTCTGGGCATCAGAACCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR GCA 90 bp TGGCAGCACTGGTGTGCCGATAAGGCCTGCTCATCAGCCAGAACCTaGAGCCAGAACCAGAAATCTCCTTACTTGGTAGCTGACAGTCTC +
Preference number: 1 (lower is better)
Translates to: WQHWCADKACSSART*SQNQKSPYLVADSL
Trigger: GAGACTGTCAGCTACCAAGTAAGGAGATTTCTGGTTCTGGCTGCAGGTTCTGGCTGATGAGCAGGCCTTATCGGCACACCAGTGCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 90 bp AGTCACCACTGCCCCCTTTCGGCAGGTCTATACTTTCTGCCAGCGTaGTGGCTCATTTGTCACCTGACCTCTGTCAGCACTAGTGTTTGG +
Preference number: 1 (lower is better)
Translates to: SHHCPLSAGLYFLPA*WLICHLTSVSTSVW
Trigger: CCAAACACTAGTGCTGACAGAGGTCAGGTGACAAATGAGCCACCACGCTGGCAGAAAGTATAGACCTGCCGAAAGGGGGCAGTGGTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR TCA 90 bp ATAGCAGAAGGGACTGAGGAAAGACAGGTCAGACACCCCAACTCCTaGGCCAGCCAGAACCTAGAATCTATTGTTCCCGCTGTTGCCAGG +
Preference number: 1 (lower is better)
Translates to: IAEGTEERQVRHPNS*ASQNLESIVPAVAR
Trigger: CCTGGCAACAGCGGGAACAATAGATTCTAGGTTCTGGCTGGCTCAGGAGTTGGGGTGTCTGACCTGTCTTTCCTCAGTCCCTTCTGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR TCA 90 bp AGAGCCTGGTGGCAGAGGACTATCAGTATCTATAGCAGAAGGGACTaGGGAAAGACAGGTCAGACACCCCAACTCCTGAGCCAGCCAGAA +
Preference number: 1 (lower is better)
Translates to: RAWWQRTISIYSRRD*GKTGQTPQLLSQPE
Trigger: TTCTGGCTGGCTCAGGAGTTGGGGTGTCTGACCTGTCTTTCCTCAGTCCCTTCTGCTATAGATACTGATAGTCCTCTGCCACCAGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR TCA 90 bp CGGCAGGTCTATACTTTCTGCCAGCGTGGTGGCTCATTTGTCACCTaGCCTCTGTCAGCACTAGTGTTTGGTTTAGCCCAGGGAAGTGAC +
Preference number: 1 (lower is better)
Translates to: RQVYTFCQRGGSFVT*PLSALVFGLAQGSD
Trigger: GTCACTTCCCTGGGCTAAACCAAACACTAGTGCTGACAGAGGTCAGGTGACAAATGAGCCACCACGCTGGCAGAAAGTATAGACCTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 90 bp TGGGCATATTCACAAACACGCTTCAGAACTGGGCTGAGAACTCAGTaGACGCCTGCACGGGACAGCCTCAAGGAACATATGTGCATGCTG +
Preference number: 1 (lower is better)
Translates to: WAYSQTRFRTGLRTQ*TPARDSLKEHMCML
Trigger: CAGCATGCACATATGTTCCTTGAGGCTGTCCCGTGCAGGCGTGCACTGAGTTCTCAGCCCAGTTCTGAAGCGTGTTTGTGAATATGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR GCA 90 bp GAAAAGCACCAGACACTGAACCGCTGCAGGGAGAGAAGTGATTCCTaGCGTGCTCGGAGAGGACCCTATACTAAAGCCACCACCATCATT +
Preference number: 1 (lower is better)
Translates to: EKHQTLNRCRERSDS*RARRGPYTKATTII
Trigger: AATGATGGTGGTGGCTTTAGTATAGGGTCCTCTCCGAGCACGGCAGGAATCACTTCTCTCCCTGCAGCGGTTCAGTGTCTGGTGCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 90 bp GGAAAGAGTCTAGAAAGAGTGGAAAAGCACCAGACACTGAACCGCTaGAGGGAGAGAAGTGATTCCTGCCGTGCTCGGAGAGGACCCTAT +
Preference number: 1 (lower is better)
Translates to: GKSLERVEKHQTLNR*RERSDSCRARRGPY
Trigger: ATAGGGTCCTCTCCGAGCACGGCAGGAATCACTTCTCTCCCTGCAGCGGTTCAGTGTCTGGTGCTTTTCCACTCTTTCTAGACTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 90 bp CCGGATGGCCTGGGTTTGCTCCTCTCCAGGGATCCTCTCCAGGGATaGATAAGACAGATGTTCATGTGTCTTGCAGGTATGGAATCTGGA +
Preference number: 1 (lower is better)
Translates to: PDGLGLLLSRDPLQG*IRQMFMCLAGMESG
Trigger: TCCAGATTCCATACCTGCAAGACACATGAACATCTGTCTTATCCATCCCTGGAGAGGATCCCTGGAGAGGAGCAAACCCAGGCCATCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 90 bp CACCACTGCCCCCTTTCGGCAGGTCTATACTTTCTGCCAGCGTGGTaGCTCATTTGTCACCTGACCTCTGTCAGCACTAGTGTTTGGTTT +
Preference number: 1 (lower is better)
Translates to: HHCPLSAGLYFLPAW*LICHLTSVSTSVWF
Trigger: AAACCAAACACTAGTGCTGACAGAGGTCAGGTGACAAATGAGCCACCACGCTGGCAGAAAGTATAGACCTGCCGAAAGGGGGCAGTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 90 bp GCCTTACTCCCAAAGGGGAAGCTGGATGTCAGGTTCTTATCCCAGTaGAGAAGACTAGGTAAAATCAGGAACCAGCCACTGGCCTGGGAA +
Preference number: 1 (lower is better)
Translates to: ALLPKGKLDVRFLSQ*RRLGKIRNQPLAWE
Trigger: TTCCCAGGCCAGTGGCTGGTTCCTGATTTTACCTAGTCTTCTGCACTGGGATAAGAACCTGACATCCAGCTTCCCCTTTGGGAGTAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR GCA 90 bp TTCACAAACACGCTTCAGAACTGGGCTGAGAACTCAGTGCACGCCTaGACGGGACAGCCTCAAGGAACATATGTGCATGCTGACACAAGT +
Preference number: 1 (lower is better)
Translates to: FTNTLQNWAENSVHA*TGQPQGTYVHADTS
Trigger: ACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCCCGTGCAGGCGTGCACTGAGTTCTCAGCCCAGTTCTGAAGCGTGTTTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 90 bp GAGGCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTaGACAGTAATTCATGTAGTGTCTTCATGGGTGGGGTTAGGGCCT +
Preference number: 1 (lower is better)
Translates to: EAKLGLIRGCIWSPV*TVIHVVSSWVGLGP
Trigger: AGGCCCTAACCCCACCCATGAAGACACTACATGAATTACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 90 bp TTGGTAGCTGACAGTCTCTTCCCAAGTTCCATCCGATTTGTTCCCTaGGAAGCAACAGCAGCTCATTTCCGCATTCCCACTAGGCCTCAG +
Preference number: 1 (lower is better)
Translates to: LVADSLFPSSIRFVP*EATAAHFRIPTRPQ
Trigger: CTGAGGCCTAGTGGGAATGCGGAAATGAGCTGCTGTTGCTTCCCAGGGAACAAATCGGATGGAACTTGGGAAGAGACTGTCAGCTACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 90 bp CTCCAAGGTGAATCAGCAAGCATGGAAGAAAACCGGTCTGCACCTTaGTTCATCCCAGCAACCCTGACCTGTCTATACCCACGTCCACAT +
Preference number: 1 (lower is better)
Translates to: LQGESASMEENRSAP*FIPATLTCLYPRPH
Trigger: ATGTGGACGTGGGTATAGACAGGTCAGGGTTGCTGGGATGAACCAAGGTGCAGACCGGTTTTCTTCCATGCTTGCTGATTCACCTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR TCA 90 bp CATGATGTATCTGGGCATATTCACAAACACGCTTCAGAACTGGGCTaGGAACTCAGTGCACGCCTGCACGGGACAGCCTCAAGGAACATA +
Preference number: 1 (lower is better)
Translates to: HDVSGHIHKHASELG*ELSARLHGTASRNI
Trigger: TATGTTCCTTGAGGCTGTCCCGTGCAGGCGTGCACTGAGTTCTCAGCCCAGTTCTGAAGCGTGTTTGTGAATATGCCCAGATACATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR TCA 90 bp AATGTTAGGCAGAAAGATCCCAGAAGTTCAGAGGGGCACTCACCTTaGCTCCCTCTGTCACAAGCCAGCCCTGACCACAGTGTAACTACA +
Preference number: 1 (lower is better)
Translates to: NVRQKDPRSSEGHSP*LPLSQASPDHSVTT
Trigger: TGTAGTTACACTGTGGTCAGGGCTGGCTTGTGACAGAGGGAGTCAAGGTGAGTGCCCCTCTGAACTTCTGGGATCTTTCTGCCTAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR TCA 90 bp AGCCAGAACCTGCAGCCAGAACCAGAAATCTCCTTACTTGGTAGCTaGCAGTCTCTTCCCAAGTTCCATCCGATTTGTTCCCTGGGAAGC +
Preference number: 1 (lower is better)
Translates to: SQNLQPEPEISLLGS*QSLPKFHPICSLGS
Trigger: GCTTCCCAGGGAACAAATCGGATGGAACTTGGGAAGAGACTGTCAGCTACCAAGTAAGGAGATTTCTGGTTCTGGCTGCAGGTTCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 90 bp AGACTGAGGAAAAGGCAGAACCAGGCTGGGAGATGGACCCTGCTTTaGAGGTGGCTAAGTAGGGAGCAGCGTGTATTCCAAATTACTAGA +
Preference number: 1 (lower is better)
Translates to: RLRKRQNQAGRWTLL*RWLSREQRVFQITR
Trigger: TCTAGTAATTTGGAATACACGCTGCTCCCTACTTAGCCACCTGCAAAGCAGGGTCCATCTCCCAGCCTGGTTCTGCCTTTTCCTCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 90 bp ATGTTCATGATGTATCTGGGCATATTCACAAACACGCTTCAGAACTaGGCTGAGAACTCAGTGCACGCCTGCACGGGACAGCCTCAAGGA +
Preference number: 1 (lower is better)
Translates to: MFMMYLGIFTNTLQN*AENSVHACTGQPQG
Trigger: TCCTTGAGGCTGTCCCGTGCAGGCGTGCACTGAGTTCTCAGCCCAGTTCTGAAGCGTGTTTGTGAATATGCCCAGATACATCATGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR TCA 90 bp TGTGACTGGAAGGCCAGTCAAAAAGAGGGTCACATGCCTCCAAGGTaGATCAGCAAGCATGGAAGAAAACCGGTCTGCACCTTGGTTCAT +
Preference number: 1 (lower is better)
Translates to: CDWKASQKEGHMPPR*ISKHGRKPVCTLVH
Trigger: ATGAACCAAGGTGCAGACCGGTTTTCTTCCATGCTTGCTGATTCACCTTGGAGGCATGTGACCCTCTTTTTGACTGGCCTTCCAGTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR TCA 90 bp ACTGATGGAACTACCACTAAGGCAGGTGTGGAGCCTGCAATCTCCTaGCCAGCTTGTGCTTCTTGGTTCTTATGCAAGCCAGTTCTCTCT +
Preference number: 1 (lower is better)
Translates to: TDGTTTKAGVEPAIS*PACASWFLCKPVLS
Trigger: AGAGAGAACTGGCTTGCATAAGAACCAAGAAGCACAAGCTGGTCAGGAGATTGCAGGCTCCACACCTGCCTTAGTGGTAGTTCCATCAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 90 bp GTAGGCTTCAAGAGGCAACAGCTTCTTATGCTTCTTCCTGCTCTCTaGTTTTACTCCCCTCACAGCCTTACCAGCAACGTCTTCAGTGGT +
Preference number: 1 (lower is better)
Translates to: VGFKRQQLLMLLPAL*FYSPHSLTSNVFSG
Trigger: ACCACTGAAGACGTTGCTGGTAAGGCTGTGAGGGGAGTAAAAGCAGAGAGCAGGAAGAAGCATAAGAAGCTGTTGCCTCTTGAAGCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 90 bp GGGATGGATAAGACAGATGTTCATGTGTCTTGCAGGTATGGAATCTaGAGGTCCAGATTAGTTCGGCAGCTCCACAGTCATCAGGAACCC +
Preference number: 1 (lower is better)
Translates to: GMDKTDVHVSCRYGI*RSRLVRQLHSHQEP
Trigger: GGGTTCCTGATGACTGTGGAGCTGCCGAACTAATCTGGACCTCCAGATTCCATACCTGCAAGACACATGAACATCTGTCTTATCCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 90 bp CCACCTGGATTCCCAAAGATAGGGCTCTCTCGACCAGACACCAAGTaGAGGCCAACGGGTGGTGACAGGGATATTTTAAAAGATCTGAAA +
Preference number: 1 (lower is better)
Translates to: PPGFPKIGLSRPDTK*RPTGGDRDILKDLK
Trigger: TTTCAGATCTTTTAAAATATCCCTGTCACCACCCGTTGGCCTCCACTTGGTGTCTGGTCGAGAGAGCCCTATCTTTGGGAATCCAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR TCA 90 bp AACTTGAGACATTCTAAACACCCAGTAGTTGACTTCATAATTCGGTaGGACTTGAAAGCAGCCCAGGCAGCGGTCAGCCAGGTCTCCCAT +
Preference number: 1 (lower is better)
Translates to: NLRHSKHPVVDFIIR*DLKAAQAAVSQVSH
Trigger: ATGGGAGACCTGGCTGACCGCTGCCTGGGCTGCTTTCAAGTCTCACCGAATTATGAAGTCAACTACTGGGTGTTTAGAATGTCTCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR TCA 90 bp AAATTCAAAAATCTGGTACCACTGGATGAGCAGCAGATTGGAAGGTaGGTCACCACTGCCCCCTTTCGGCAGGTCTATACTTTCTGCCAG +
Preference number: 1 (lower is better)
Translates to: KFKNLVPLDEQQIGR*VTTAPFRQVYTFCQ
Trigger: CTGGCAGAAAGTATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTTCCAATCTGCTGCTCATCCAGTGGTACCAGATTTTTGAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 90 bp CCGATAAGCCCAGCATGCCACATCTTAATATTCCTCCTGCTAAGGTaGCCGAAGTTCTCTCAGATGTCTGCTTCTAGCCTGCTAGTCTTT +
Preference number: 1 (lower is better)
Translates to: PISPACHILIFLLLR*PKFSQMSASSLLVF
Trigger: AAAGACTAGCAGGCTAGAAGCAGACATCTGAGAGAACTTCGGGCACCTTAGCAGGAGGAATATTAAGATGTGGCATGCTGGGCTTATCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR GCA 90 bp AGGTTTGTGCGTGTGCGTAGACACATACCTGTGTACTTGAGGACATaGAATGTCATTCATACTGATCCCCCTCCTAGCATCCCAGCAATG +
Preference number: 1 (lower is better)
Translates to: RFVRVRRHIPVYLRT*NVIHTDPPPSIPAM
Trigger: CATTGCTGGGATGCTAGGAGGGGGATCAGTATGAATGACATTGCATGTCCTCAAGTACACAGGTATGTGTCTACGCACACGCACAAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 90 bp AATCTTGAAGTACTGACAGCCAAGGCTGCAGGACTAGGGAACAGCTaGGGAAGTCTCAGAATGTTAGGCAGAAAGATCCCAGAAGTTCAG +
Preference number: 1 (lower is better)
Translates to: NLEVLTAKAAGLGNS*GSLRMLGRKIPEVQ
Trigger: CTGAACTTCTGGGATCTTTCTGCCTAACATTCTGAGACTTCCCCAGCTGTTCCCTAGTCCTGCAGCCTTGGCTGTCAGTACTTCAAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR TCA 90 bp GACCAGCTTGTGCTTCTTGGTTCTTATGCAAGCCAGTTCTCTCTGTaGAATATTTCTAAGCAGCCCTCAACCACCAGGTCTATGAGGGTC +
Preference number: 1 (lower is better)
Translates to: DQLVLLGSYASQFSL*NISKQPSTTRSMRV
Trigger: GACCCTCATAGACCTGGTGGTTGAGGGCTGCTTAGAAATATTTCACAGAGAGAACTGGCTTGCATAAGAACCAAGAAGCACAAGCTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 90 bp AACATCAGTAGGCTTCAAGAGGCAACAGCTTCTTATGCTTCTTCCTaGTCTCTGCTTTTACTCCCCTCACAGCCTTACCAGCAACGTCTT +
Preference number: 1 (lower is better)
Translates to: NISRLQEATASYASS*SLLLLPSQPYQQRL
Trigger: AAGACGTTGCTGGTAAGGCTGTGAGGGGAGTAAAAGCAGAGAGCAGGAAGAAGCATAAGAAGCTGTTGCCTCTTGAAGCCTACTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 90 bp ATCCCAGCAACCCTGACCTGTCTATACCCACGTCCACATAAACCTTaGTATCTAATGTCACCCGAGCAGAGGCAAGAGCACATATACTAT +
Preference number: 1 (lower is better)
Translates to: IPATLTCLYPRPHKP*YLMSPEQRQEHIYY
Trigger: ATAGTATATGTGCTCTTGCCTCTGCTCGGGTGACATTAGATAGCAAGGTTTATGTGGACGTGGGTATAGACAGGTCAGGGTTGCTGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR TCA 90 bp ATGTCATTCATACTGATCCCCCTCCTAGCATCCCAGCAATGTTCATaGTGTATCTGGGCATATTCACAAACACGCTTCAGAACTGGGCTG +
Preference number: 1 (lower is better)
Translates to: MSFILIPLLASQQCS*CIWAYSQTRFRTGL
Trigger: CAGCCCAGTTCTGAAGCGTGTTTGTGAATATGCCCAGATACATCATGAACATTGCTGGGATGCTAGGAGGGGGATCAGTATGAATGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR TCA 90 bp GTGCGTATATACTTTTATAGGGAAAGGCGTCTATGTGTGTGTATGTaGGGTCTACCTCCATTTAGACTTGAAGGTGCTGCAGCCAATTGT +
Preference number: 1 (lower is better)
Translates to: VRIYFYRERRLCVCM*GLPPFRLEGAAANC
Trigger: ACAATTGGCTGCAGCACCTTCAAGTCTAAATGGAGGTAGACCTCACATACACACACATAGACGCCTTTCCCTATAAAAGTATATACGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 90 bp ATGTCCCCTTTCCTTTCAGAATGGGCAGAAGATTCACATCAGACATaGTCAAATACTCCCAGACACACACTTAGCCATATTATACACATG +
Preference number: 1 (lower is better)
Translates to: MSPFLSEWAEDSHQT*SNTPRHTLSHIIHM
Trigger: CATGTGTATAATATGGCTAAGTGTGTGTCTGGGAGTATTTGACCATGTCTGATGTGAATCTTCTGCCCATTCTGAAAGGAAAGGGGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR GCA 90 bp TTAGTAGAAACTCCTAGAGCCCTTTTGGAAAGACATTTGGTGTTATaGATGAGATCCTCAAAACTGCTCATTTATCCCATTTCATCCAAA +
Preference number: 1 (lower is better)
Translates to: LVETPRALLERHLVL*MRSSKLLIYPISSK
Trigger: TTTGGATGAAATGGGATAAATGAGCAGTTTTGAGGATCTCATGCATAACACCAAATGTCTTTCCAAAAGGGCTCTAGGAGTTTCTACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR TCA 90 bp CAGGAAAAGCTTCATATAAGATATTCGTTGCAGTATCTAAACGAGTaGCCAACCAGAAACAATTCAAATGTCCAGCAATATGGAAATTGT +
Preference number: 1 (lower is better)
Translates to: QEKLHIRYSLQYLNE*PTRNNSNVQQYGNC
Trigger: ACAATTTCCATATTGCTGGACATTTGAATTGTTTCTGGTTGGTCACTCGTTTAGATACTGCAACGAATATCTTATATGAAGCTTTTCCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR GCA 90 bp ACGCCCAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATCACTGGCCCCTCGGCTaGTGCTGGGTCTGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: TPKSQPFPLEAKPPAHRDHWPLG*CWVCLA
Trigger: GGCCAGGCAGACCCAGCAGCAGCCGAGGGGCCAGTG...ATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR-3UTR GCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACACACTGGCCCCTCGGCTaGTGCTGGGTCTGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTHWPLG*CWVCLA
Trigger: GGCCAGGCAGACCCAGCAGCAGCCGAGGGGCCAGTG...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR-3UTR TCA 90 bp AGGAGCAGCCCGTGGAAGAGGCCTTACTCCCAAAGGGGAAGCTGGATGTCAGGTGCAGGTATTCGGTTCTaGTGCCCAGAGTGGCTGTCC +
Preference number: 2 (lower is better)
Translates to: RSSPWKRPYSQRGSWMSGAGIRF*CPEWLS
Trigger: GGACAGCCACTCTGGGCATCAGAACCGAATACCTGC...ACCTGACATCCAGCTTCCCCTTTGGGAGTAAGGCCTCTTCCACGGGCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CCA 90 bp GAGACACAACTGGTACCAGGCCCACCCTCTGCCATGCTGGCTCCCCTCTCAGAGTTGGTAGGCAGAGCCTaGTGGCAGAGGACTATCAGT +
Preference number: 2 (lower is better)
Translates to: ETQLVPGPPSAMLAPLSELVGRA*WQRTIS
Trigger: ACTGATAGTCCTCTGCCACCAGGCTCTGCCTACCAA...CTCTGAGAGGGGAGCCAGCATGGCAGAGGGTGGGCCTGGTACCAGTTGTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CAA 90 bp GCGGTCAGCCAGGTCTCCCATGCAGAAAATCCGGATGGCCTGGGTTaGCTCCTCTCCAGGGATCCTCTCCAGGGATGGATAAGACAGATG +
Preference number: 2 (lower is better)
Translates to: AVSQVSHAENPDGLG*LLSRDPLQGWIRQM
Trigger: CATCTGTCTTATCCATCCCTGGAGAGGATCCCTGGAGAGGAGCAAACCCAGGCCATCCGGATTTTCTGCATGGGAGACCTGGCTGACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR TCA 90 bp CGTGGAAGAGGCCTTACTCCCAAAGGGGAAGCTGGATGTCAGGTTCTTATCCCAGCTGGGCTGTGCAACTaGGAGGAGTGGGGAGCAGGT +
Preference number: 2 (lower is better)
Translates to: RGRGLTPKGEAGCQVLIPAGLCN*EEWGAG
Trigger: ACCTGCTCCCCACTCCTCTCAGTTGCACAGCCCAGC...TGGGATAAGAACCTGACATCCAGCTTCCCCTTTGGGAGTAAGGCCTCTTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR GCA 90 bp AGGAGCAGCCCGTGGAAGAGGCCTTACTCCCAAAGGGGAAGCTGGATGTCAGGTGCACAGCCAGCTGTCTaGAGCTGCAGCTTTCCACAT +
Preference number: 2 (lower is better)
Translates to: RSSPWKRPYSQRGSWMSGAQPAV*SCSFPH
Trigger: ATGTGGAAAGCTGCAGCTGCAGACAGCTGGCTGTGC...ACCTGACATCCAGCTTCCCCTTTGGGAGTAAGGCCTCTTCCACGGGCTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR GCA 90 bp ACGCCCAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATCCACCACACAACAGATaGGGCCTTCCTCTTCACTGG +
Preference number: 2 (lower is better)
Translates to: TPKSQPFPLEAKPPAHRDPPHNR*GLPLHW
Trigger: CCAGTGAAGAGGAAGGCCGCATCTGTTGTGTGGTGG...ATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTGGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR-3UTR TCA 90 bp ACGCCCAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATGTAAACTCAGATGCCTaGGTGCTTGTGGCCACCACA +
Preference number: 2 (lower is better)
Translates to: TPKSQPFPLEAKPPAHRDVNSDA*VLVATT
Trigger: TGTGGTGGCCACAAGCACTCAGGCATCTGAGTTTAC...ATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTGGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR-3UTR GCA 90 bp GTGCACGCCTGCACGGGACAGCCTCAAGGAACATATGTGCATGCTGACACAAGTCATCTCCCTTCCCACTaGAGTGAAGCCAGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: VHACTGQPQGTYVHADTSHLPSH*SEARSW
Trigger: CCAGCTCCTGGCTTCACTGCAGTGGGAAGGGAGATG...ACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCCCGTGCAGGCGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR GCA 90 bp ATGAGCAGCAGATTGGAAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATAGCCAACGACTCAACCTaGTCCCTCCTCTCAGGCCAC +
Preference number: 2 (lower is better)
Translates to: MSSRLEGESPLPPFGRSIANDST*SLLSGH
Trigger: GTGGCCTGAGAGGAGGGAGCAGGTTGAGTCGTTGGC...TATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTTCCAATCTGCTGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR CCA 90 bp GGACAGCCTCAAGGAACATATGTGCATGCTGACACAAGTCCAGCTGGCCGTCCTAACCAGCCACTGGCCTaGGAACCTACAGTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: GQPQGTYVHADTSPAGRPNQPLA*EPTVRG
Trigger: TCCCCTCACTGTAGGTTCCCAGGCCAGTGGCTGGTT...AGGACGGCCAGCTGGACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CCA 90 bp AATCAAAGTGAGACTGGAAGAAGGGAGCCACCTGGATTCCCAAAGATAGGGCTCCCCCTCGGCTGCTGCTaGGTCTGCCTGGCCATCAAG +
Preference number: 2 (lower is better)
Translates to: NQSETGRREPPGFPKIGLPLGCC*VCLAIK
Trigger: CTTGATGGCCAGGCAGACCCAGCAGCAGCCGAGGGG...GAGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTTCCAGTCTCACTTTGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR CCA 90 bp TTCTGGCAGCTGCCCAGCCGACTTGTGCTAACACAGCAACAGGCACAGGAAAGAAGGACTGCCATAGGGTaGCAGCACTGGTGTGCCGAT +
Preference number: 2 (lower is better)
Translates to: FWQLPSRLVLTQQQAQERRTAIG*QHWCAD
Trigger: ATCGGCACACCAGTGCTGCCACCCTATGGCAGTCCT...TCTTTCCTGTGCCTGTTGCTGTGTTAGCACAAGTCGGCTGGGCAGCTGCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR TCA 90 bp AGTGGGGAGCAGGTATTCGGTTCTGATGCCCAGAGTGGCTGTCCCCACCATTTCCTTCTGCCCCAGCACTaGAAAGAATCCTGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: SGEQVFGSDAQSGCPHHFLLPQH*KESCRA
Trigger: AGCTCTGCAGGATTCTTTTCAGTGCTGGGGCAGAAG...GAAATGGTGGGGACAGCCACTCTGGGCATCAGAACCGAATACCTGCTCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR TCA 90 bp GTGCACGCCTGCACGGGACAGCCTCAAGGAACATATGTGCATGCTGACACAAGTCTGGCCGTCCTGGCATaGTCACTGACTGACACATGT +
Preference number: 2 (lower is better)
Translates to: VHACTGQPQGTYVHADTSLAVLA*SLTDTC
Trigger: ACATGTGTCAGTCAGTGATCATGCCAGGACGGCCAG...ACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCCCGTGCAGGCGTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR GCA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTCCACCACACAACAGATaGGGCCTTCCTCTTCACTGG +
Preference number: 2 (lower is better)
Translates to: AIPTRGQTACPQRLTANVPPHNR*GLPLHW
Trigger: CCAGTGAAGAGGAAGGCCGCATCTGTTGTGTGGTGG...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR-3UTR CCA 90 bp TGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGTACCCCTCGGCTGCTGCTaGGTCTGCCTGGCCATCAAG +
Preference number: 2 (lower is better)
Translates to: CFPSWGNPIPELTRQISVPLGCC*VCLAIK
Trigger: CTTGATGGCCAGGCAGACCCAGCAGCAGCCGAGGGG...TACTGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR-3UTR CCA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCACCCCTCGGCTGCTGCTaGGTCTGCCTGGCCATCAAG +
Preference number: 2 (lower is better)
Translates to: KCFPSWGNPIPELTRQISPLGCC*VCLAIK
Trigger: CTTGATGGCCAGGCAGACCCAGCAGCAGCCGAGGGG...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR-3UTR TCA 90 bp GAGACACAACTGGTACCAGGCCCACCCTCTGCCATGCTGGCTCCCCTCTCAGAGTGGTCAGTCATATTCTaGGTTCAAGAGTCCTTCATC +
Preference number: 2 (lower is better)
Translates to: ETQLVPGPPSAMLAPLSEWSVIF*VQESFI
Trigger: GATGAAGGACTCTTGAACTCAGAATATGACTGACCA...CTCTGAGAGGGGAGCCAGCATGGCAGAGGGTGGGCCTGGTACCAGTTGTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR TCA 90 bp TTCTGGCAGCTGCCCAGCCGACTTGTGCTAACACAGCAACAGGCACAGGAAAGACTTGAGGAGCTGAAGTaGGAGGATCACTTGAGCCCA +
Preference number: 2 (lower is better)
Translates to: FWQLPSRLVLTQQQAQERLEELK*EDHLSP
Trigger: TGGGCTCAAGTGATCCTCTCACTTCAGCTCCTCAAG...TCTTTCCTGTGCCTGTTGCTGTGTTAGCACAAGTCGGCTGGGCAGCTGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR GCA 90 bp GCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTGGACAGTAATTCGGATGGCCTGGGTTTaGTCCTCTCCAGGGATCCTC +
Preference number: 2 (lower is better)
Translates to: AKLGLIRGCIWSPVWTVIRMAWV*SSPGIL
Trigger: GAGGATCCCTGGAGAGGAGCAAACCCAGGCCATCCG...AATTACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR GCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAACTCAGATGCCTGAGTaGTTGTGGCCACCACACAAC +
Preference number: 2 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTTQMPE*LWPPHN
Trigger: GTTGTGTGGTGGCCACAAGCACTCAGGCATCTGAGT...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR-3UTR CCA 90 bp GAGGCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTGGACAGTAGCTCCCAGACTGCAGTaGAAAACACAGACCAGGAGC +
Preference number: 2 (lower is better)
Translates to: EAKLGLIRGCIWSPVWTVAPRLQ*KTQTRS
Trigger: GCTCCTGGTCTGTGTTTTCCACTGCAGTCTGGGAGC...TACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAATGCCTGAGTGCTTGTaGCCACCACACAACAGATGC +
Preference number: 2 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTMPECL*PPHNRC
Trigger: GCATCTGTTGTGTGGTGGCCACAAGCACTCAGGCAT...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR-3UTR CCA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTATGCCTGAGTGCTTGTaGCCACCACACAACAGATGC +
Preference number: 2 (lower is better)
Translates to: AIPTRGQTACPQRLTANVMPECL*PPHNRC
Trigger: GCATCTGTTGTGTGGTGGCCACAAGCACTCAGGCAT...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR-3UTR TCA 90 bp GACTCTGGCAAGGCTAATTCCATGATGTTTCACTCAGCGGCAGTCCCACCAGCCCCTGCCCACAGAGATTaGCAGCCAATGTTCATCTCA +
Preference number: 2 (lower is better)
Translates to: DSGKANSMMFHSAAVPPAPAHRD*QPMFIS
Trigger: TGAGATGAACATTGGCTGTCAATCTCTGTGGGCAGG...GGCTGGTGGGACTGCCGCTGAGTGAAACATCATGGAATTAGCCTTGCCAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR TCA 90 bp TTCTGGCAGCTGCCCAGCCGACTTGTGCTAACACAGCAACAGGCACAGGAAAGAAAGGAGGAGGCAGTTTaGGAGGTCACAAATTGGCAG +
Preference number: 2 (lower is better)
Translates to: FWQLPSRLVLTQQQAQERKEEAV*EVTNWQ
Trigger: CTGCCAATTTGTGACCTCTCAAACTGCCTCCTCCTT...TCTTTCCTGTGCCTGTTGCTGTGTTAGCACAAGTCGGCTGGGCAGCTGCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR GCA 90 bp ATGAGCAGCAGATTGGAAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATAGTTCCTGGGAATCTGTaGCTCCAGGGTTCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: MSSRLEGESPLPPFGRSIVPGNL*LQGSVQ
Trigger: TTGCACTGAACCCTGGAGGCACAGATTCCCAGGAAC...TATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTTCCAATCTGCTGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR CCA 90 bp AAAAGGGAGAGTGGGCCCATGTCCCCTTTCCTTTCAGAATGGGCAGAAGATTCATCAGGGAGACACAACTaGTACCAGGCCCACCCTCTG +
Preference number: 2 (lower is better)
Translates to: KRESGPMSPFLSEWAEDSSGRHN*YQAHPL
Trigger: CAGAGGGTGGGCCTGGTACCAGTTGTGTCTCCCTGA...TGAATCTTCTGCCCATTCTGAAAGGAAAGGGGACATGGGCCCACTCTCCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CCA 90 bp ACGCCCAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATATTAGATGTGGGTTCTaGGGCTCTGTCAACATGGTA +
Preference number: 2 (lower is better)
Translates to: TPKSQPFPLEAKPPAHRDIRCGF*GSVNMV
Trigger: TACCATGTTGACAGAGCCCCAGAACCCACATCTAAT...ATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTGGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR-3UTR TCA 90 bp TCTCAGATCCTGTATTCAGGGAGACACAACTGGTACCAGGCCCACCCTCTGCCATATAGCAGAAGGGACTaGGGAAAGACAGGTCAGACA +
Preference number: 2 (lower is better)
Translates to: SQILYSGRHNWYQAHPLPYSRRD*GKTGQT
Trigger: TGTCTGACCTGTCTTTCCTCAGTCCCTTCTGCTATA...TGGCAGAGGGTGGGCCTGGTACCAGTTGTGTCTCCCTGAATACAGGATCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR TCA 90 bp GTGCACGCCTGCACGGGACAGCCTCAAGGAACATATGTGCATGCTGACACAAGTGGCATGATCACTGACTaGCACATGTACTCAGACACA +
Preference number: 2 (lower is better)
Translates to: VHACTGQPQGTYVHADTSGMITD*HMYSDT
Trigger: TGTGTCTGAGTACATGTGTCAGTCAGTGATCATGCC...ACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCCCGTGCAGGCGTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR TCA 90 bp ATGAGCAGCAGATTGGAAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATAGGGGAATCCCATTCCTaGGCTGACAAGACAGATTTC +
Preference number: 2 (lower is better)
Translates to: MSSRLEGESPLPPFGRSIGESHS*ADKTDF
Trigger: GAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCC...TATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTTCCAATCTGCTGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR TCA 90 bp TCATGTGTTTCAGTGAACTGTGACTGGAAGGCCAGTCAAAAAGAGGGTCACATGGTCCCTGCCCCAAAGTaGACAGTCTGGGCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: SCVSVNCDWKASQKEGHMVPAPK*TVWASQ
Trigger: CTGGGAAGCCCAGACTGTTCACTTTGGGGCAGGGAC...CATGTGACCCTCTTTTTGACTGGCCTTCCAGTCACAGTTCACTGAAACACATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR GCA 90 bp TTCTGGCAGCTGCCCAGCCGACTTGTGCTAACACAGCAACAGGCACAGGAAAGATCATCAGCCAGAACCTaGAGCCAGAACCAGAAATCT +
Preference number: 2 (lower is better)
Translates to: FWQLPSRLVLTQQQAQERSSART*SQNQKS
Trigger: AGATTTCTGGTTCTGGCTGCAGGTTCTGGCTGATGA...TCTTTCCTGTGCCTGTTGCTGTGTTAGCACAAGTCGGCTGGGCAGCTGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR CCA 90 bp TCTCAGATCCTGTATTCAGGGAGACACAACTGGTACCAGGCCCACCCTCTGCCATGCAGGTATGGAATCTaGAGGTCCAGATTAGTTCGG +
Preference number: 2 (lower is better)
Translates to: SQILYSGRHNWYQAHPLPCRYGI*RSRLVR
Trigger: CCGAACTAATCTGGACCTCCAGATTCCATACCTGCA...TGGCAGAGGGTGGGCCTGGTACCAGTTGTGTCTCCCTGAATACAGGATCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CCA 90 bp AGTGGGGAGCAGGTATTCGGTTCTGATGCCCAGAGTGGCTGTCCCCACCATTTCTGTGTCTTGCAGGTATaGAATCTGGAGGTCCAGATT +
Preference number: 2 (lower is better)
Translates to: SGEQVFGSDAQSGCPHHFCVLQV*NLEVQI
Trigger: AATCTGGACCTCCAGATTCCATACCTGCAAGACACA...GAAATGGTGGGGACAGCCACTCTGGGCATCAGAACCGAATACCTGCTCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CCA 90 bp GCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTGGACAGTAATTAGTGAAGCCAGGAGCTaGGCTGTGCAACTGAGAGGA +
Preference number: 2 (lower is better)
Translates to: AKLGLIRGCIWSPVWTVISEARS*AVQLRG
Trigger: TCCTCTCAGTTGCACAGCCCAGCTCCTGGCTTCACT...AATTACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CCA 90 bp AAGAAGGGAGCCACCTGGATTCCCAAAGATAGGGCTCTCTCGACCAGACACCAATACTTTCTGCCAGCGTaGTGGCTCATTTGTCACCTG +
Preference number: 2 (lower is better)
Translates to: KKGATWIPKDRALSTRHQYFLPA*WLICHL
Trigger: CAGGTGACAAATGAGCCACCACGCTGGCAGAAAGTA...TTGGTGTCTGGTCGAGAGAGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR TCA 90 bp AAGTCTCAGAATGTTAGGCAGAAAGATCCCAGAAGTTCAGAGGGGCACTCACCTAGACACCCCAACTCCTaGGCCAGCCAGAACCTAGAA +
Preference number: 2 (lower is better)
Translates to: KSQNVRQKDPRSSEGHSPRHPNS*ASQNLE
Trigger: TTCTAGGTTCTGGCTGGCTCAGGAGTTGGGGTGTCT...AGGTGAGTGCCCCTCTGAACTTCTGGGATCTTTCTGCCTAACATTCTGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR GCA 90 bp GGACAGCCTCAAGGAACATATGTGCATGCTGACACAAGTCCAGCTGGCCGTCCTGATGTTCATGTGTCTTaGAGGTATGGAATCTGGAGG +
Preference number: 2 (lower is better)
Translates to: GQPQGTYVHADTSPAGRPDVHVS*RYGIWR
Trigger: CCTCCAGATTCCATACCTGCAAGACACATGAACATC...AGGACGGCCAGCTGGACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR GCA 90 bp CGTGGAAGAGGCCTTACTCCCAAAGGGGAAGCTGGATGTCAGGTTCTTATCCCAGCTTCACAGCCTGTCTaGTCCTTTCTAAACAGACAG +
Preference number: 2 (lower is better)
Translates to: RGRGLTPKGEAGCQVLIPASQPV*SFLNRQ
Trigger: CTGTCTGTTTAGAAAGGAGCAGACAGGCTGTGAAGC...TGGGATAAGAACCTGACATCCAGCTTCCCCTTTGGGAGTAAGGCCTCTTCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR GCA 90 bp TGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGTACCACCACACAACAGATaGGGCCTTCCTCTTCACTGG +
Preference number: 2 (lower is better)
Translates to: CFPSWGNPIPELTRQISVPPHNR*GLPLHW
Trigger: CCAGTGAAGAGGAAGGCCGCATCTGTTGTGTGGTGG...TACTGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR-3UTR GCA 90 bp ATGAGCAGCAGATTGGAAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATAGGCAACAGCTTCTTATaGTTCTTCCTGCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: MSSRLEGESPLPPFGRSIGNSFL*FFLLSA
Trigger: AGCAGAGAGCAGGAAGAAGCATAAGAAGCTGTTGCC...TATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTTCCAATCTGCTGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR GCA 90 bp AAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATACTTTCTGCCAGCGTGGTCAAATGCTCACTACTaGCCTGTGCTGACTTTAGTT +
Preference number: 2 (lower is better)
Translates to: KVSHHCPLSAGLYFLPAWSNAHY*PVLTLV
Trigger: AACTAAAGTCAGCACAGGGCAGTAGTGAGCATTTGA...CCACGCTGGCAGAAAGTATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR GCA 90 bp TTCTGGCAGCTGCCCAGCCGACTTGTGCTAACACAGCAACAGGCACAGGAAAGACGTCCACATAAACCTTaGTATCTAATGTCACCCGAG +
Preference number: 2 (lower is better)
Translates to: FWQLPSRLVLTQQQAQERRPHKP*YLMSPE
Trigger: CTCGGGTGACATTAGATAGCAAGGTTTATGTGGACG...TCTTTCCTGTGCCTGTTGCTGTGTTAGCACAAGTCGGCTGGGCAGCTGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR CCA 90 bp GCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTGGACAGTAATTGTAGGCAGAGCCTGGTaGCAGAGGACTATCAGTATC +
Preference number: 2 (lower is better)
Translates to: AKLGLIRGCIWSPVWTVIVGRAW*QRTISI
Trigger: GATACTGATAGTCCTCTGCCACCAGGCTCTGCCTAC...AATTACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CAA 90 bp TGCTCATCAGCCAGAACCTGCAGCCAGAACCAGAAATCTCCTTACTaGGTAGCTGACAGTCTCTTCCCAAGTTCCATCCGATTTGTTCCC +
Preference number: 2 (lower is better)
Translates to: CSSARTCSQNQKSPY*VADSLFPSSIRFVP
Trigger: GGGAACAAATCGGATGGAACTTGGGAAGAGACTGTCAGCTACCAAGTAAGGAGATTTCTGGTTCTGGCTGCAGGTTCTGGCTGATGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR TCA 90 bp ATGAGCAGCAGATTGGAAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATAAGCCAGGTGCATATTTaGATTCTTTCCAGTGCAGAC +
Preference number: 2 (lower is better)
Translates to: MSSRLEGESPLPPFGRSISQVHI*ILSSAD
Trigger: GTCTGCACTGGAAAGAATTCAAATATGCACCTGGCT...TATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTTCCAATCTGCTGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR GCA 90 bp CGTGGAAGAGGCCTTACTCCCAAAGGGGAAGCTGGATGTCAGGTTCTTATCCCACACCATTTCTCCTTCTaGCCCAGCACTGAAAAGAAT +
Preference number: 2 (lower is better)
Translates to: RGRGLTPKGEAGCQVLIPHHFSF*PSTEKN
Trigger: ATTCTTTTCAGTGCTGGGGCAGAAGGAGAAATGGTG...TGGGATAAGAACCTGACATCCAGCTTCCCCTTTGGGAGTAAGGCCTCTTCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR GCA 90 bp ACAGCAGCTCATTTCCGCATTCCCACTAGGCCTCAGGGAGCCTTAGAAGAAGCCTATCCTGCTCTAAAATaGCTGTACTTGCCTAACTCC +
Preference number: 2 (lower is better)
Translates to: TAAHFRIPTRPQGALEEAYPALK*LYLPNS
Trigger: GGAGTTAGGCAAGTACAGGCATTTTAGAGCAGGATA...GGCTTCTTCTAAGGCTCCCTGAGGCCTAGTGGGAATGCGGAAATGAGCTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR TCA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCACCTGCCCACAGAGATTaGCAGCCAATGTTCATCTCA +
Preference number: 2 (lower is better)
Translates to: KCFPSWGNPIPELTRQISPAHRD*QPMFIS
Trigger: TGAGATGAACATTGGCTGTCAATCTCTGTGGGCAGG...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR-3UTR GCA 90 bp ATACCTGTGTACTTGAGGACATGCAATGTCATTCATACTGATCCCCCTCCTAGCAGATGGACCCTGCTTTaGAGGTGGCTAAGTAGGGAG +
Preference number: 2 (lower is better)
Translates to: IPVYLRTCNVIHTDPPPSRWTLL*RWLSRE
Trigger: CTCCCTACTTAGCCACCTGCAAAGCAGGGTCCATCT...GCTAGGAGGGGGATCAGTATGAATGACATTGCATGTCCTCAAGTACACAGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CCA 90 bp GAAGATTCACATCAGACATGGTCAAATACTCCCAGACACACACTTAGCCATATTCAGGCTGATGGGCTCTaGGTGTCCATAGCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: EDSHQTWSNTPRHTLSHIQADGL*VSIAPQ
Trigger: CTGGGGAGCTATGGACACCCAGAGCCCATCAGCCTG...AATATGGCTAAGTGTGTGTCTGGGAGTATTTGACCATGTCTGATGTGAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CCA 90 bp AATCAAAGTGAGACTGGAAGAAGGGAGCCACCTGGATTCCCAAAGATAGGGCTCATCCGATTTGTTCCCTaGGAAGCAACAGCAGCTCAT +
Preference number: 2 (lower is better)
Translates to: NQSETGRREPPGFPKIGLIRFVP*EATAAH
Trigger: ATGAGCTGCTGTTGCTTCCCAGGGAACAAATCGGAT...GAGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTTCCAGTCTCACTTTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR GCA 90 bp AAAAGGGAGAGTGGGCCCATGTCCCCTTTCCTTTCAGAATGGGCAGAAGATTCATATTGTTCCCGCTGTTaGCAGGAAAACAACTGGAAG +
Preference number: 2 (lower is better)
Translates to: KRESGPMSPFLSEWAEDSYCSRC*QENNWK
Trigger: CTTCCAGTTGTTTTCCTGGCAACAGCGGGAACAATA...TGAATCTTCTGCCCATTCTGAAAGGAAAGGGGACATGGGCCCACTCTCCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CCA 90 bp GCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTGGACAGTAATTTGCCAGGAAAACAACTaGAAGACTCAATCTCCACCT +
Preference number: 2 (lower is better)
Translates to: AKLGLIRGCIWSPVWTVICQENN*KTQSPP
Trigger: AGGTGGAGATTGAGTCTTCCAGTTGTTTTCCTGGCA...AATTACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CCA 90 bp AAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATACTTTCTGCCAGCGTGGAAATGTCCAGCAATATaGAAATTGTCCAGGATAAAC +
Preference number: 2 (lower is better)
Translates to: KVSHHCPLSAGLYFLPAWKCPAI*KLSRIN
Trigger: GTTTATCCTGGACAATTTCCATATTGCTGGACATTT...CCACGCTGGCAGAAAGTATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR TCA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAAGCCAGGTGCATATTTaGATTCTTTCCAGTGCAGAC +
Preference number: 2 (lower is better)
Translates to: KCFPSWGNPIPELTRQISSQVHI*ILSSAD
Trigger: GTCTGCACTGGAAAGAATTCAAATATGCACCTGGCT...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR-3UTR GCA 90 bp CCTAAGAAGACCCCCAAATACCACCTGGATGATAAGATTCGATCATTATGGTTCACTCAGATGCCTGAGTaGTTGTGGCCACCACACAAC +
Preference number: 2 (lower is better)
Translates to: PKKTPKYHLDDKIRSLWFTQMPE*LWPPHN
Trigger: GTTGTGTGGTGGCCACAAGCACTCAGGCATCTGAGT...GAACCATAATGATCGAATCTTATCATCCAGGTGGTATTTGGGGGTCTTCTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR CCA 90 bp TGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGTAATTAGATGTGGGTTCTaGGGCTCTGTCAACATGGTA +
Preference number: 2 (lower is better)
Translates to: CFPSWGNPIPELTRQISVIRCGF*GSVNMV
Trigger: TACCATGTTGACAGAGCCCCAGAACCCACATCTAAT...TACTGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR-3UTR CCA 90 bp AAAATAGTGAAGGGAGCCAGGTGCATATTTGAATTCTTTCCAGTGCAGACTGGAATGCCTGAGTGCTTGTaGCCACCACACAACAGATGC +
Preference number: 2 (lower is better)
Translates to: KIVKGARCIFEFFPVQTGMPECL*PPHNRC
Trigger: GCATCTGTTGTGTGGTGGCCACAAGCACTCAGGCAT...TCCAGTCTGCACTGGAAAGAATTCAAATATGCACCTGGCTCCCTTCACTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR-3UTR CCA 90 bp TGCTGGAACAGGATGAAAACTGATACACCGGTTACTAATTACTCTTCACTCTTCACCTCCTGGGCATTCTaGCCAATCTGCTTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: CWNRMKTDTPVTNYSSLFTSWAF*PICFPL
Trigger: CAGAGGGAAGCAGATTGGCCAGAATGCCCAGGAGGT...GAAGAGTGAAGAGTAATTAGTAACCGGTGTATCAGTTTTCATCCTGTTCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CAA 90 bp ATATTAGAGAGGTTTGTGCGTGTGCGTAGACACATACCTGTGTACTaGAGGACATGCAATGTCATTCATACTGATCCCCCTCCTAGCATC +
Preference number: 2 (lower is better)
Translates to: ILERFVRVRRHIPVY*RTCNVIHTDPPPSI
Trigger: GATGCTAGGAGGGGGATCAGTATGAATGACATTGCATGTCCTCAAGTACACAGGTATGTGTCTACGCACACGCACAAACCTCTCTAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR TCA 90 bp TGCTGGAACAGGATGAAAACTGATACACCGGTTACTAATTACTCTTCACTCTTCGGCTCATTTGTCACCTaGCCTCTGTCAGCACTAGTG +
Preference number: 2 (lower is better)
Translates to: CWNRMKTDTPVTNYSSLFGSFVT*PLSALV
Trigger: CACTAGTGCTGACAGAGGTCAGGTGACAAATGAGCC...GAAGAGTGAAGAGTAATTAGTAACCGGTGTATCAGTTTTCATCCTGTTCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR TCA 90 bp TGCTGGAACAGGATGAAAACTGATACACCGGTTACTAATTACTCTTCACTCTTCAATTCTCCTGATCTGTaGCCTCCTGGGCATTCTGGC +
Preference number: 2 (lower is better)
Translates to: CWNRMKTDTPVTNYSSLFNSPDL*PPGHSG
Trigger: GCCAGAATGCCCAGGAGGTCACAGATCAGGAGAATT...GAAGAGTGAAGAGTAATTAGTAACCGGTGTATCAGTTTTCATCCTGTTCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR GCA 90 bp GCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTGGACAGTAATTAGGTTCTTATCCCAGTaGAGAAGACTAGGTAAAATC +
Preference number: 2 (lower is better)
Translates to: AKLGLIRGCIWSPVWTVIRFLSQ*RRLGKI
Trigger: GATTTTACCTAGTCTTCTGCACTGGGATAAGAACCT...AATTACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR GCA 90 bp AAGAAGGGAGCCACCTGGATTCCCAAAGATAGGGCTCTCTCGACCAGACACCAAATACCAATGTTATCCTaGTCTAAAATGCCTGTACTT +
Preference number: 2 (lower is better)
Translates to: KKGATWIPKDRALSTRHQIPMLS*SKMPVL
Trigger: AAGTACAGGCATTTTAGAGCAGGATAACATTGGTAT...TTGGTGTCTGGTCGAGAGAGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR GCA 90 bp AAGAAGGGAGCCACCTGGATTCCCAAAGATAGGGCTCTCTCGACCAGACACCAACATGGGAAATGTGTTTaGTATTATTTCTGTAGGCTT +
Preference number: 2 (lower is better)
Translates to: KKGATWIPKDRALSTRHQHGKCV*YYFCRL
Trigger: AAGCCTACAGAAATAATAGCAAACACATTTCCCATG...TTGGTGTCTGGTCGAGAGAGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR GCA 90 bp TCTAAACGAGTGACCAACCAGAAACAATTCAAATGTCCAGCAATATGGAAATTGCCACCACACAACAGATaGGGCCTTCCTCTTCACTGG +
Preference number: 2 (lower is better)
Translates to: SKRVTNQKQFKCPAIWKLPPHNR*GLPLHW
Trigger: CCAGTGAAGAGGAAGGCCGCATCTGTTGTGTGGTGG...CAATTTCCATATTGCTGGACATTTGAATTGTTTCTGGTTGGTCACTCGTTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR TCA 90 bp CCTAAGAAGACCCCCAAATACCACCTGGATGATAAGATTCGATCATTATGGTTCGGGGGTAGAAGATGGTaGCTGTTTTCAAGCAAATTC +
Preference number: 2 (lower is better)
Translates to: PKKTPKYHLDDKIRSLWFGGRRW*LFSSKF
Trigger: GAATTTGCTTGAAAACAGTCACCATCTTCTACCCCC...GAACCATAATGATCGAATCTTATCATCCAGGTGGTATTTGGGGGTCTTCTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR TCA 90 bp TCATGTGTTTCAGTGAACTGTGACTGGAAGGCCAGTCAAAAAGAGGGTCACATGATTTGGTGTTATGCATaGGATCCTCAAAACTGCTCA +
Preference number: 2 (lower is better)
Translates to: SCVSVNCDWKASQKEGHMIWCYA*DPQNCS
Trigger: TGAGCAGTTTTGAGGATCTCATGCATAACACCAAAT...CATGTGACCCTCTTTTTGACTGGCCTTCCAGTCACAGTTCACTGAAACACATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR GCA 90 bp TCTAAACGAGTGACCAACCAGAAACAATTCAAATGTCCAGCAATATGGAAATTGCTCTCCTCCCAGCAGTaGACCAGTAAACTCAGATGC +
Preference number: 2 (lower is better)
Translates to: SKRVTNQKQFKCPAIWKLLSSQQ*TSKLRC
Trigger: GCATCTGAGTTTACTGGTGCACTGCTGGGAGGAGAG...CAATTTCCATATTGCTGGACATTTGAATTGTTTCTGGTTGGTCACTCGTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR GCA 90 bp TGCTGGAACAGGATGAAAACTGATACACCGGTTACTAATTACTCTTCACTCTTCCTTTTACATTTTCACTaGCTGGCTCCCAACCCAGAC +
Preference number: 2 (lower is better)
Translates to: CWNRMKTDTPVTNYSSLFLLHFH*LAPNPD
Trigger: GTCTGGGTTGGGAGCCAGGCAGTGAAAATGTAAAAG...GAAGAGTGAAGAGTAATTAGTAACCGGTGTATCAGTTTTCATCCTGTTCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CAA 90 bp AAAGGCGTCTATGTGTGTGTATGTGAGGTCTACCTCCATTTAGACTaGAAGGTGCTGCAGCCAATTGTAATAATGGTAAAAAGGTTCCTG +
Preference number: 2 (lower is better)
Translates to: KGVYVCVCEVYLHLD*KVLQPIVIMVKRFL
Trigger: CAGGAACCTTTTTACCATTATTACAATTGGCTGCAGCACCTTCAAGTCTAAATGGAGGTAGACCTCACATACACACACATAGACGCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR GCA 90 bp TGCTGGAACAGGATGAAAACTGATACACCGGTTACTAATTACTCTTCACTCTTCCTCCTGACCAGCTTGTaGTTCTTGGTTCTTATGCAA +
Preference number: 2 (lower is better)
Translates to: CWNRMKTDTPVTNYSSLFLLTSL*FLVLMQ
Trigger: TTGCATAAGAACCAAGAAGCACAAGCTGGTCAGGAG...GAAGAGTGAAGAGTAATTAGTAACCGGTGTATCAGTTTTCATCCTGTTCCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR GCA 90 bp TGCTGGAACAGGATGAAAACTGATACACCGGTTACTAATTACTCTTCACTCTTCCTTAGGTTATTAAGCTaGCTTTGTACAGGATGCCCA +
Preference number: 2 (lower is better)
Translates to: CWNRMKTDTPVTNYSSLFLRLLS*LCTGCP
Trigger: TGGGCATCCTGTACAAAGGCAGCTTAATAACCTAAG...GAAGAGTGAAGAGTAATTAGTAACCGGTGTATCAGTTTTCATCCTGTTCCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR CCA 90 bp TGCTGGAACAGGATGAAAACTGATACACCGGTTACTAATTACTCTTCACTCTTCAACGAGCTGGGAACATaGGTGACCTTTTTAAAATCC +
Preference number: 2 (lower is better)
Translates to: CWNRMKTDTPVTNYSSLFNELGT*VTFLKS
Trigger: GGATTTTAAAAAGGTCACCCATGTTCCCAGCTCGTT...GAAGAGTGAAGAGTAATTAGTAACCGGTGTATCAGTTTTCATCCTGTTCCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR CCA 90 bp TCTAAACGAGTGACCAACCAGAAACAATTCAAATGTCCAGCAATATGGAAATTGCCCCCAAATACCACCTaGATGATAAGATTCGATCAT +
Preference number: 2 (lower is better)
Translates to: SKRVTNQKQFKCPAIWKLPPNTT*MIRFDH
Trigger: ATGATCGAATCTTATCATCCAGGTGGTATTTGGGGG...CAATTTCCATATTGCTGGACATTTGAATTGTTTCTGGTTGGTCACTCGTTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 72 bp GAGCCCTGGGGAGCTGACCAGAGTCAAAAGGCTCCCTaGCAGGCTTGTTCTGGCAGCTGCCCAGCCGACTTG +
Preference number: 3 (lower is better)
Translates to: EPWGADQSQKAP*QACSGSCPADL
Trigger: CAAGTCGGCTGGGCAGCTGCCAGAACAAGCCTGCCAGGGAGCCTTTTGACTCTGGTCAGCTCCCCAGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 72 bp GTTTCACTCAGCGGCAGTCCCACCAGCCTGGAGCCCTaGGGAGCTGACCAGAGTCAAAAGGCTCCCTGGCAG +
Preference number: 3 (lower is better)
Translates to: VSLSGSPTSLEP*GADQSQKAPWQ
Trigger: CTGCCAGGGAGCCTTTTGACTCTGGTCAGCTCCCCAGGGCTCCAGGCTGGTGGGACTGCCGCTGAGTGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 72 bp ATTCAGGGAGACACAACTGGTACCAGGCCCACCCTCTaGCATGCTGGCTCCCCTCTCAGAGCCAGGCTAGGT +
Preference number: 3 (lower is better)
Translates to: IQGDTTGTRPTL*HAGSPLRARLG
Trigger: ACCTAGCCTGGCTCTGAGAGGGGAGCCAGCATGGCAGAGGGTGGGCCTGGTACCAGTTGTGTCTCCCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 72 bp CCCAGCTCTCAGATCCTGTATTCAGGGAGACACAACTaGTACCAGGCCCACCCTCTGCCATGCTGGCTCCCC +
Preference number: 3 (lower is better)
Translates to: PSSQILYSGRHN*YQAHPLPCWLP
Trigger: GGGGAGCCAGCATGGCAGAGGGTGGGCCTGGTACCAGTTGTGTCTCCCTGAATACAGGATCTGAGAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 72 bp AGCGGTCAGCCAGGTCTCCCATGCAGAAAATCCGGATaGCCTGGGTTTGCTCCTCTCCAGGGATCCTCTCCA +
Preference number: 3 (lower is better)
Translates to: SGQPGLPCRKSG*PGFAPLQGSSP
Trigger: TGGAGAGGATCCCTGGAGAGGAGCAAACCCAGGCCATCCGGATTTTCTGCATGGGAGACCTGGCTGACCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 72 bp TCCATGATGTTTCACTCAGCGGCAGTCCCACCAGCCTaGAGCCCTGGGGAGCTGACCAGAGTCAAAAGGCTC +
Preference number: 3 (lower is better)
Translates to: SMMFHSAAVPPA*SPGELTRVKRL
Trigger: GAGCCTTTTGACTCTGGTCAGCTCCCCAGGGCTCCAGGCTGGTGGGACTGCCGCTGAGTGAAACATCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR CAA 90 bp ACGCCCAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATCAGATGCCTGAGTGCTaGTGGCCACCACACAACAGA +
Preference number: 3 (lower is better)
Translates to: TPKSQPFPLEAKPPAHRDQMPEC*WPPHNR
Trigger: TCTGTTGTGTGGTGGCCACAAGCACTCAGGCATCTG...ATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTGGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR GCA 72 bp GCCATAGGGTGGCAGCACTGGTGTGCCGATAAGGCCTaGTCATCAGCCAGAACCTGCAGCCAGAACCAGAAA +
Preference number: 3 (lower is better)
Translates to: AIGWQHWCADKA*SSARTCSQNQK
Trigger: TTTCTGGTTCTGGCTGCAGGTTCTGGCTGATGAGCAGGCCTTATCGGCACACCAGTGCTGCCACCCTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 72 bp TCAGCCAGGTCTCCCATGCAGAAAATCCGGATGGCCTaGGTTTGCTCCTCTCCAGGGATCCTCTCCAGGGAT +
Preference number: 3 (lower is better)
Translates to: SARSPMQKIRMA*VCSSPGILSRD
Trigger: ATCCCTGGAGAGGATCCCTGGAGAGGAGCAAACCCAGGCCATCCGGATTTTCTGCATGGGAGACCTGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 72 bp CTTCATCTCCCTTCCCACTGCAGTGAAGCCAGGAGCTaGGCTGTGCAACTGAGAGGAGTGGGGAGCAGGTAT +
Preference number: 3 (lower is better)
Translates to: LHLPSHCSEARS*AVQLRGVGSRY
Trigger: ATACCTGCTCCCCACTCCTCTCAGTTGCACAGCCCAGCTCCTGGCTTCACTGCAGTGGGAAGGGAGATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 72 bp TTGGTAATGCCCAGGACTGCCATAGGGTGGCAGCACTaGTGTGCCGATAAGGCCTGCTCATCAGCCAGAACC +
Preference number: 3 (lower is better)
Translates to: LVMPRTAIGWQH*CADKACSSART
Trigger: GGTTCTGGCTGATGAGCAGGCCTTATCGGCACACCAGTGCTGCCACCCTATGGCAGTCCTGGGCATTACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 72 bp ACTGCAGGCTTGGTAATGCCCAGGACTGCCATAGGGTaGCAGCACTGGTGTGCCGATAAGGCCTGCTCATCA +
Preference number: 3 (lower is better)
Translates to: TAGLVMPRTAIG*QHWCADKACSS
Trigger: TGATGAGCAGGCCTTATCGGCACACCAGTGCTGCCACCCTATGGCAGTCCTGGGCATTACCAAGCCTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR TCA 72 bp CTGCACGGGACAGCCTCAAGGAACATATGTGCATGCTaGCACAAGTCCAGCTGGCCGTCCTGGCATGATCAC +
Preference number: 3 (lower is better)
Translates to: LHGTASRNICAC*HKSSWPSWHDH
Trigger: GTGATCATGCCAGGACGGCCAGCTGGACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCCCGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CAA 90 bp GGACAGCCTCAAGGAACATATGTGCATGCTGACACAAGTCCAGCTGGCCGTCCTGGAGATGAGGCCAAATaGGGTCTAATCCGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: GQPQGTYVHADTSPAGRPGDEAK*GLIRGC
Trigger: GCAGCCTCGGATTAGACCCAATTTGGCCTCATCTCC...AGGACGGCCAGCTGGACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CAA 90 bp AAGAAGGGAGCCACCTGGATTCCCAAAGATAGGGCTCTCTCGACCAGACACCAAGGCAGATGGGATCGCTaGAGGTCAGGAGTTCGAGAC +
Preference number: 3 (lower is better)
Translates to: KKGATWIPKDRALSTRHQGRWDR*RSGVRD
Trigger: GTCTCGAACTCCTGACCTCAAGCGATCCCATCTGCC...TTGGTGTCTGGTCGAGAGAGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR TCA 72 bp TCTGGGCATATTCACAAACACGCTTCAGAACTGGGCTaGGAACTCAGTGCACGCCTGCACGGGACAGCCTCA +
Preference number: 3 (lower is better)
Translates to: SGHIHKHASELG*ELSARLHGTAS
Trigger: TGAGGCTGTCCCGTGCAGGCGTGCACTGAGTTCTCAGCCCAGTTCTGAAGCGTGTTTGTGAATATGCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR GCA 72 bp GATGCCCAGAGTGGCTGTCCCCACCATTTCTCCTTCTaGCCCAGCACTGAAAAGAATCCTGCAGAGCTTCAC +
Preference number: 3 (lower is better)
Translates to: DAQSGCPHHFSF*PSTEKNPAELH
Trigger: GTGAAGCTCTGCAGGATTCTTTTCAGTGCTGGGGCAGAAGGAGAAATGGTGGGGACAGCCACTCTGGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR GCA 72 bp ACGCTTCAGAACTGGGCTGAGAACTCAGTGCACGCCTaGACGGGACAGCCTCAAGGAACATATGTGCATGCT +
Preference number: 3 (lower is better)
Translates to: TLQNWAENSVHA*TGQPQGTYVHA
Trigger: AGCATGCACATATGTTCCTTGAGGCTGTCCCGTGCAGGCGTGCACTGAGTTCTCAGCCCAGTTCTGAAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 72 bp TGCCCCCTTTCGGCAGGTCTATACTTTCTGCCAGCGTaGTGGCTCATTTGTCACCTGACCTCTGTCAGCACT +
Preference number: 3 (lower is better)
Translates to: CPLSAGLYFLPA*WLICHLTSVST
Trigger: AGTGCTGACAGAGGTCAGGTGACAAATGAGCCACCACGCTGGCAGAAAGTATAGACCTGCCGAAAGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR CAA 90 bp GAAGGCCAGTCAAAAAGAGGGTCACATGCCTCCAAGGTGAATCAGCAAGCATGGCCCAGGAGGCAGAAGTaGCAGTCAGCCAAGATCACG +
Preference number: 3 (lower is better)
Translates to: EGQSKRGSHASKVNQQAWPRRQK*QSAKIT
Trigger: CGTGATCTTGGCTGACTGCAACTTCTGCCTCCTGGG...CCATGCTTGCTGATTCACCTTGGAGGCATGTGACCCTCTTTTTGACTGGCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR TCA 72 bp GGGACTGAGGAAAGACAGGTCAGACACCCCAACTCCTaGGCCAGCCAGAACCTAGAATCTATTGTTCCCGCT +
Preference number: 3 (lower is better)
Translates to: GTEERQVRHPNS*ASQNLESIVPA
Trigger: AGCGGGAACAATAGATTCTAGGTTCTGGCTGGCTCAGGAGTTGGGGTGTCTGACCTGTCTTTCCTCAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR GCA 72 bp TCACAAACACGCTTCAGAACTGGGCTGAGAACTCAGTaGACGCCTGCACGGGACAGCCTCAAGGAACATATG +
Preference number: 3 (lower is better)
Translates to: SQTRFRTGLRTQ*TPARDSLKEHM
Trigger: CATATGTTCCTTGAGGCTGTCCCGTGCAGGCGTGCACTGAGTTCTCAGCCCAGTTCTGAAGCGTGTTTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR GCA 72 bp TCAGCACTAGTGTTTGGTTTAGCCCAGGGAAGTGACTaGAGGCTTGGTAATGCCCAGGACTGCCATAGGGTG +
Preference number: 3 (lower is better)
Translates to: SALVFGLAQGSD*RLGNAQDCHRV
Trigger: CACCCTATGGCAGTCCTGGGCATTACCAAGCCTGCAGTCACTTCCCTGGGCTAAACCAAACACTAGTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 72 bp CTAGAAAGAGTGGAAAAGCACCAGACACTGAACCGCTaGAGGGAGAGAAGTGATTCCTGCCGTGCTCGGAGA +
Preference number: 3 (lower is better)
Translates to: LERVEKHQTLNR*RERSDSCRARR
Trigger: TCTCCGAGCACGGCAGGAATCACTTCTCTCCCTGCAGCGGTTCAGTGTCTGGTGCTTTTCCACTCTTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 72 bp GGTCAGGAAGAGCTCAGGGACTTGGTAGGCAGAGCCTaGTGGCAGAGGACTATCAGTATCTATAGCAGAAGG +
Preference number: 3 (lower is better)
Translates to: GQEELRDLVGRA*WQRTISIYSRR
Trigger: CCTTCTGCTATAGATACTGATAGTCCTCTGCCACCAGGCTCTGCCTACCAAGTCCCTGAGCTCTTCCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 72 bp AGAAGACTAGGTAAAATCAGGAACCAGCCACTGGCCTaGGAACCTACAGTGAGGGGAGAGACCAGGCTGATG +
Preference number: 3 (lower is better)
Translates to: RRLGKIRNQPLA*EPTVRGETRLM
Trigger: CATCAGCCTGGTCTCTCCCCTCACTGTAGGTTCCCAGGCCAGTGGCTGGTTCCTGATTTTACCTAGTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 72 bp CCCCTTTCGGCAGGTCTATACTTTCTGCCAGCGTGGTaGCTCATTTGTCACCTGACCTCTGTCAGCACTAGT +
Preference number: 3 (lower is better)
Translates to: PLSAGLYFLPAW*LICHLTSVSTS
Trigger: ACTAGTGCTGACAGAGGTCAGGTGACAAATGAGCCACCACGCTGGCAGAAAGTATAGACCTGCCGAAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR TCA 72 bp TGCATGCTGACACAAGTCCAGCTGGCCGTCCTGGCATaGTCACTGACTGACACATGTACTCAGACACACACA +
Preference number: 3 (lower is better)
Translates to: CMLTQVQLAVLA*SLTDTCTQTHT
Trigger: TGTGTGTGTCTGAGTACATGTGTCAGTCAGTGATCATGCCAGGACGGCCAGCTGGACTTGTGTCAGCATGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR GCA 72 bp ATTCTGAGTTCAAGAGTCCTTCATCTCCCTTCCCACTaGAGTGAAGCCAGGAGCTGGGCTGTGCAACTGAGA +
Preference number: 3 (lower is better)
Translates to: ILSSRVLHLPSH*SEARSWAVQLR
Trigger: TCTCAGTTGCACAGCCCAGCTCCTGGCTTCACTGCAGTGGGAAGGGAGATGAAGGACTCTTGAACTCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 72 bp ATGTATCTGGGCATATTCACAAACACGCTTCAGAACTaGGCTGAGAACTCAGTGCACGCCTGCACGGGACAG +
Preference number: 3 (lower is better)
Translates to: MYLGIFTNTLQN*AENSVHACTGQ
Trigger: CTGTCCCGTGCAGGCGTGCACTGAGTTCTCAGCCCAGTTCTGAAGCGTGTTTGTGAATATGCCCAGATACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 72 bp AGAGGGTCACATGCCTCCAAGGTGAATCAGCAAGCATaGAAGAAAACCGGTCTGCACCTTGGTTCATCCCAG +
Preference number: 3 (lower is better)
Translates to: RGSHASKVNQQA*KKTGLHLGSSQ
Trigger: CTGGGATGAACCAAGGTGCAGACCGGTTTTCTTCCATGCTTGCTGATTCACCTTGGAGGCATGTGACCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR CAA 90 bp GTGCACGCCTGCACGGGACAGCCTCAAGGAACATATGTGCATGCTGACACAAGTCCAGCTGTAAGGGTCTaGGTCAGTCATATTCTGAGT +
Preference number: 3 (lower is better)
Translates to: VHACTGQPQGTYVHADTSPAVRV*VSHILS
Trigger: ACTCAGAATATGACTGACCAAGACCCTTACAGCTGG...ACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCCCGTGCAGGCGTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CAA 90 bp GAAGGCCAGTCAAAAAGAGGGTCACATGCCTCCAAGGTGAATCAGCAAGCATGGGCCTGCCCACAGAGATaGACAGCCAATGTTCATCTC +
Preference number: 3 (lower is better)
Translates to: EGQSKRGSHASKVNQQAWACPQR*TANVHL
Trigger: GAGATGAACATTGGCTGTCAATCTCTGTGGGCAGGC...CCATGCTTGCTGATTCACCTTGGAGGCATGTGACCCTCTTTTTGACTGGCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR CAA 90 bp ATGAGCAGCAGATTGGAAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATACAAGTTCCATCCGATTaGTTCCCTGGGAAGCAACAG +
Preference number: 3 (lower is better)
Translates to: MSSRLEGESPLPPFGRSIQVPSD*FPGKQQ
Trigger: CTGTTGCTTCCCAGGGAACAAATCGGATGGAACTTG...TATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTTCCAATCTGCTGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR CAA 90 bp GAAAAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTCAGATGCCTGAGTGCTaGTGGCCACCACACAACAGA +
Preference number: 3 (lower is better)
Translates to: EKCFPSWGNPIPELTRQIQMPEC*WPPHNR
Trigger: TCTGTTGTGTGGTGGCCACAAGCACTCAGGCATCTG...AATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
3UTR TCA 72 bp TGGCAGAGGACTATCAGTATCTATAGCAGAAGGGACTaGGGAAAGACAGGTCAGACACCCCAACTCCTGAGC +
Preference number: 3 (lower is better)
Translates to: WQRTISIYSRRD*GKTGQTPQLLS
Trigger: GCTCAGGAGTTGGGGTGTCTGACCTGTCTTTCCTCAGTCCCTTCTGCTATAGATACTGATAGTCCTCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR TCA 72 bp AAAACCGGTCTGCACCTTGGTTCATCCCAGCAACCCTaGCCTGTCTATACCCACGTCCACATAAACCTTGCT +
Preference number: 3 (lower is better)
Translates to: KTGLHLGSSQQP*PVYTHVHINLA
Trigger: AGCAAGGTTTATGTGGACGTGGGTATAGACAGGTCAGGGTTGCTGGGATGAACCAAGGTGCAGACCGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR TCA 72 bp AAGGCCAGTCAAAAAGAGGGTCACATGCCTCCAAGGTaGATCAGCAAGCATGGAAGAAAACCGGTCTGCACC +
Preference number: 3 (lower is better)
Translates to: KASQKEGHMPPR*ISKHGRKPVCT
Trigger: GGTGCAGACCGGTTTTCTTCCATGCTTGCTGATTCACCTTGGAGGCATGTGACCCTCTTTTTGACTGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR TCA 72 bp ACTACCACTAAGGCAGGTGTGGAGCCTGCAATCTCCTaGCCAGCTTGTGCTTCTTGGTTCTTATGCAAGCCA +
Preference number: 3 (lower is better)
Translates to: TTTKAGVEPAIS*PACASWFLCKP
Trigger: TGGCTTGCATAAGAACCAAGAAGCACAAGCTGGTCAGGAGATTGCAGGCTCCACACCTGCCTTAGTGGTAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 72 bp ACCCTGACCTGTCTATACCCACGTCCACATAAACCTTaGTATCTAATGTCACCCGAGCAGAGGCAAGAGCAC +
Preference number: 3 (lower is better)
Translates to: TLTCLYPRPHKP*YLMSPEQRQEH
Trigger: GTGCTCTTGCCTCTGCTCGGGTGACATTAGATAGCAAGGTTTATGTGGACGTGGGTATAGACAGGTCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 72 bp ATTCTGGCCAATCTGCTTCCCTCTGACTTTGCAGACTaGACTGATGGAACTACCACTAAGGCAGGTGTGGAG +
Preference number: 3 (lower is better)
Translates to: ILANLLPSDFAD*TDGTTTKAGVE
Trigger: CTCCACACCTGCCTTAGTGGTAGTTCCATCAGTGCAGTCTGCAAAGTCAGAGGGAAGCAGATTGGCCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 72 bp CTGGGTTTGCTCCTCTCCAGGGATCCTCTCCAGGGATaGATAAGACAGATGTTCATGTGTCTTGCAGGTATG +
Preference number: 3 (lower is better)
Translates to: LGLLLSRDPLQG*IRQMFMCLAGM
Trigger: CATACCTGCAAGACACATGAACATCTGTCTTATCCATCCCTGGAGAGGATCCCTGGAGAGGAGCAAACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 72 bp TTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTaGACAGTAATTCATGTAGTGTCTTCATGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: LGLIRGCIWSPV*TVIHVVSSWVG
Trigger: CCCCACCCATGAAGACACTACATGAATTACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 72 bp GAATCAGCAAGCATGGAAGAAAACCGGTCTGCACCTTaGTTCATCCCAGCAACCCTGACCTGTCTATACCCA +
Preference number: 3 (lower is better)
Translates to: ESASMEENRSAP*FIPATLTCLYP
Trigger: TGGGTATAGACAGGTCAGGGTTGCTGGGATGAACCAAGGTGCAGACCGGTTTTCTTCCATGCTTGCTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR CAA 90 bp GAAGGCCAGTCAAAAAGAGGGTCACATGCCTCCAAGGTGAATCAGCAAGCATGGAGTTTCCAGGGCTCCTaGGCACCCTTTAATACCAAT +
Preference number: 3 (lower is better)
Translates to: EGQSKRGSHASKVNQQAWSFQGS*APFNTN
Trigger: ATTGGTATTAAAGGGTGCCAAGGAGCCCTGGAAACT...CCATGCTTGCTGATTCACCTTGGAGGCATGTGACCCTCTTTTTGACTGGCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR CAA 90 bp AAGAAGGGAGCCACCTGGATTCCCAAAGATAGGGCTCTCTCGACCAGACACCAACAGAAATCTCCTTACTaGGTAGCTGACAGTCTCTTC +
Preference number: 3 (lower is better)
Translates to: KKGATWIPKDRALSTRHQQKSPY*VADSLF
Trigger: GAAGAGACTGTCAGCTACCAAGTAAGGAGATTTCTG...TTGGTGTCTGGTCGAGAGAGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR TCA 72 bp AAGCCCCAAGCACATCCACTCACTCATGTGTTTCAGTaGACTGTGACTGGAAGGCCAGTCAAAAAGAGGGTC +
Preference number: 3 (lower is better)
Translates to: KPQAHPLTHVFQ*TVTGRPVKKRV
Trigger: GACCCTCTTTTTGACTGGCCTTCCAGTCACAGTTCACTGAAACACATGAGTGAGTGGATGTGCTTGGGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 72 bp CCAGCATGCCACATCTTAATATTCCTCCTGCTAAGGTaGCCGAAGTTCTCTCAGATGTCTGCTTCTAGCCTG +
Preference number: 3 (lower is better)
Translates to: PACHILIFLLLR*PKFSQMSASSL
Trigger: CAGGCTAGAAGCAGACATCTGAGAGAACTTCGGGCACCTTAGCAGGAGGAATATTAAGATGTGGCATGCTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR GCA 72 bp CCAAAGGGGAAGCTGGATGTCAGGTTCTTATCCCAGTaGAGAAGACTAGGTAAAATCAGGAACCAGCCACTG +
Preference number: 3 (lower is better)
Translates to: PKGKLDVRFLSQ*RRLGKIRNQPL
Trigger: CAGTGGCTGGTTCCTGATTTTACCTAGTCTTCTGCACTGGGATAAGAACCTGACATCCAGCTTCCCCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR GCA 72 bp AAGAGGCAACAGCTTCTTATGCTTCTTCCTGCTCTCTaGTTTTACTCCCCTCACAGCCTTACCAGCAACGTC +
Preference number: 3 (lower is better)
Translates to: KRQQLLMLLPAL*FYSPHSLTSNV
Trigger: GACGTTGCTGGTAAGGCTGTGAGGGGAGTAAAAGCAGAGAGCAGGAAGAAGCATAAGAAGCTGTTGCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 72 bp GCCTGTCAGACTCTAGAATCCACTTTATTTTTCCTCTaGTACACTGCCCTGGCTCCCTACCCTACAAGTGCT +
Preference number: 3 (lower is better)
Translates to: ACQTLESTLFFL*YTALAPYPTSA
Trigger: AGCACTTGTAGGGTAGGGAGCCAGGGCAGTGTAGCAGAGGAAAAATAAAGTGGATTCTAGAGTCTGACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 72 bp TTCCCAAAGATAGGGCTCTCTCGACCAGACACCAAGTaGAGGCCAACGGGTGGTGACAGGGATATTTTAAAA +
Preference number: 3 (lower is better)
Translates to: FPKIGLSRPDTK*RPTGGDRDILK
Trigger: TTTTAAAATATCCCTGTCACCACCCGTTGGCCTCCACTTGGTGTCTGGTCGAGAGAGCCCTATCTTTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR TCA 72 bp AGAGCACATATACTATCTTACAGCCACCGCAACGGCTaGTTTCAGCCAGCCTGTGGGAAAGAAAGATCTAGC +
Preference number: 3 (lower is better)
Translates to: RAHILSYSHRNG*FQPACGKERSS
Trigger: GCTAGATCTTTCTTTCCCACAGGCTGGCTGAAATCAGCCGTTGCGGTGGCTGTAAGATAGTATATGTGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR TCA 72 bp AAGCACATCCACTCACTCATGTGTTTCAGTGAACTGTaGCTGGAAGGCCAGTCAAAAAGAGGGTCACATGCC +
Preference number: 3 (lower is better)
Translates to: KHIHSLMCFSEL*LEGQSKRGSHA
Trigger: GGCATGTGACCCTCTTTTTGACTGGCCTTCCAGTCACAGTTCACTGAAACACATGAGTGAGTGGATGTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 72 bp AGCCAGCCAGAACCTAGAATCTATTGTTCCCGCTGTTaGCAGGAAAACAACTGGAAGACTCAATCTCCACCT +
Preference number: 3 (lower is better)
Translates to: SQPEPRIYCSRC*QENNWKTQSPP
Trigger: AGGTGGAGATTGAGTCTTCCAGTTGTTTTCCTGGCAACAGCGGGAACAATAGATTCTAGGTTCTGGCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR GCA 72 bp CAAGGAGATGAGGCCAAATTGGGTCTAATCCGAGGCTaGATCTGGAGTCCAGTCTGGACAGTAATTCATGTA +
Preference number: 3 (lower is better)
Translates to: QGDEAKLGLIRG*IWSPVWTVIHV
Trigger: TACATGAATTACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGCCTCATCTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR GCA 72 bp CGTGTGCGTAGACACATACCTGTGTACTTGAGGACATaGAATGTCATTCATACTGATCCCCCTCCTAGCATC +
Preference number: 3 (lower is better)
Translates to: RVRRHIPVYLRT*NVIHTDPPPSI
Trigger: GATGCTAGGAGGGGGATCAGTATGAATGACATTGCATGTCCTCAAGTACACAGGTATGTGTCTACGCACACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR GCA 72 bp ACTGTGACTGGAAGGCCAGTCAAAAAGAGGGTCACATaGCTCCAAGGTGAATCAGCAAGCATGGAAGAAAAC +
Preference number: 3 (lower is better)
Translates to: TVTGRPVKKRVT*LQGESASMEEN
Trigger: GTTTTCTTCCATGCTTGCTGATTCACCTTGGAGGCATGTGACCCTCTTTTTGACTGGCCTTCCAGTCACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 72 bp ACATCCACTCACTCATGTGTTTCAGTGAACTGTGACTaGAAGGCCAGTCAAAAAGAGGGTCACATGCCTCCA +
Preference number: 3 (lower is better)
Translates to: TSTHSCVSVNCD*KASQKEGHMPP
Trigger: TGGAGGCATGTGACCCTCTTTTTGACTGGCCTTCCAGTCACAGTTCACTGAAACACATGAGTGAGTGGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR-3UTR CAA 90 bp ATACCTGTGTACTTGAGGACATGCAATGTCATTCATACTGATCCCCCTCCTAGCCTATTGTTCCCGCTGTaGCCAGGAAAACAACTGGAA +
Preference number: 3 (lower is better)
Translates to: IPVYLRTCNVIHTDPPPSLLFPL*PGKQLE
Trigger: TTCCAGTTGTTTTCCTGGCAACAGCGGGAACAATAG...GCTAGGAGGGGGATCAGTATGAATGACATTGCATGTCCTCAAGTACACAGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CAA 90 bp TGCTGGAACAGGATGAAAACTGATACACCGGTTACTAATTACTCTTCACTCTTCAAACCGGTCTGCACCTaGGTTCATCCCAGCAACCCT +
Preference number: 3 (lower is better)
Translates to: CWNRMKTDTPVTNYSSLFKPVCT*VHPSNP
Trigger: AGGGTTGCTGGGATGAACCAAGGTGCAGACCGGTTT...GAAGAGTGAAGAGTAATTAGTAACCGGTGTATCAGTTTTCATCCTGTTCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 72 bp AGCAATGGGCCTGATATCAGAACGACTCCTGAGCTCTaGAGCTCGCAGAATAGAAATGTATTCCTTCTGATC +
Preference number: 3 (lower is better)
Translates to: SNGPDIRTTPEL*SSQNRNVFLLI
Trigger: GATCAGAAGGAATACATTTCTATTCTGCGAGCTGCAGAGCTCAGGAGTCGTTCTGATATCAGGCCCATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR CCA 72 bp AAGACAGATGTTCATGTGTCTTGCAGGTATGGAATCTaGAGGTCCAGATTAGTTCGGCAGCTCCACAGTCAT +
Preference number: 3 (lower is better)
Translates to: KTDVHVSCRYGI*RSRLVRQLHSH
Trigger: ATGACTGTGGAGCTGCCGAACTAATCTGGACCTCCAGATTCCATACCTGCAAGACACATGAACATCTGTCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR TCA 72 bp ATACTGATCCCCCTCCTAGCATCCCAGCAATGTTCATaGTGTATCTGGGCATATTCACAAACACGCTTCAGA +
Preference number: 3 (lower is better)
Translates to: ILIPLLASQQCS*CIWAYSQTRFR
Trigger: TCTGAAGCGTGTTTGTGAATATGCCCAGATACATCATGAACATTGCTGGGATGCTAGGAGGGGGATCAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CAA 90 bp TCATGTGTTTCAGTGAACTGTGACTGGAAGGCCAGTCAAAAAGAGGGTCACATGGTTATTAAGCTGCCTTaGTACAGGATGCCCAAAAGT +
Preference number: 3 (lower is better)
Translates to: SCVSVNCDWKASQKEGHMVIKLP*YRMPKS
Trigger: ACTTTTGGGCATCCTGTACAAAGGCAGCTTAATAAC...CATGTGACCCTCTTTTTGACTGGCCTTCCAGTCACAGTTCACTGAAACACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 72 bp TATCTAGCACTTGCATGTTTTCAGAGCACTCTAAACTaGTTGTCTCACTCTTTTCACACGATCAGCAGGGAA +
Preference number: 3 (lower is better)
Translates to: YLALACFQSTLN*LSHSFHTISRE
Trigger: TTCCCTGCTGATCGTGTGAAAAGAGTGAGACAACCAGTTTAGAGTGCTCTGAAAACATGCAAGTGCTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CCA 72 bp TTCCTTTCAGAATGGGCAGAAGATTCACATCAGACATaGTCAAATACTCCCAGACACACACTTAGCCATATT +
Preference number: 3 (lower is better)
Translates to: FLSEWAEDSHQT*SNTPRHTLSHI
Trigger: AATATGGCTAAGTGTGTGTCTGGGAGTATTTGACCATGTCTGATGTGAATCTTCTGCCCATTCTGAAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
3UTR-3UTR CAA 90 bp TCTAAACGAGTGACCAACCAGAAACAATTCAAATGTCCAGCAATATGGAAATTGGAGCCAGGTGCATATTaGAATTCTTTCCAGTGCAGA +
Preference number: 3 (lower is better)
Translates to: SKRVTNQKQFKCPAIWKLEPGAY*NSFQCR
Trigger: TCTGCACTGGAAAGAATTCAAATATGCACCTGGCTC...CAATTTCCATATTGCTGGACATTTGAATTGTTTCTGGTTGGTCACTCGTTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 72 bp ACTCCTAGAGCCCTTTTGGAAAGACATTTGGTGTTATaGATGAGATCCTCAAAACTGCTCATTTATCCCATT +
Preference number: 3 (lower is better)
Translates to: TPRALLERHLVL*MRSSKLLIYPI
Trigger: AATGGGATAAATGAGCAGTTTTGAGGATCTCATGCATAACACCAAATGTCTTTCCAAAAGGGCTCTAGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR GCA 72 bp CCACTGGGTCAAATTAACCCCACGGGTATGATAGCATaGTTAGAATTTTGTATAATGAATTATCAACACTTG +
Preference number: 3 (lower is better)
Translates to: PLGQINPTGMIA*LEFCIMNYQHL
Trigger: CAAGTGTTGATAATTCATTATACAAAATTCTAAGCATGCTATCATACCCGTGGGGTTAATTTGACCCAGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp ACGCCCAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGGGCTGACCCGACCTaGTCGCCGGGACCGCGCGCT +
Preference number: 4 (lower is better)
Translates to: TPKSQPFPLEAKPPAHRDWADPT*SPGPRA
Trigger: AGCGCGCGGTCCCGGCGAGCAGGTCGGGTCAGCCCA...ATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTGGGCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS-3UTR CCA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTGGGAGCTGGCAGATCTaGCCGGGACCGGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCGSWQI*PGPGWT
Trigger: GGTCCACCCCGGTCCCGGCCAGATCTGCCAGCTCCC...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS-3UTR CCA 90 bp GGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGGGGCGGGGAGCGGAGTaGAATGGCCTCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GSVNMVAGQVTTHSRTIGGRGAE*NGLRAS
Trigger: GGAGGCCCTGAGGCCATTCCACTCCGCTCCCCGCCC...CCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CCA 90 bp AAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATACTTTCTGCCAGCGTGGGCAGTCCCACCAGCCTaGAGCCCTGGGGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: KVSHHCPLSAGLYFLPAWAVPPA*SPGELT
Trigger: GGTCAGCTCCCCAGGGCTCCAGGCTGGTGGGACTGC...CCACGCTGGCAGAAAGTATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCGCCAGAGAGGGGAGCTaGCAGATCTGGCCGGGACCG +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTAREGS*QIWPGP
Trigger: CGGTCCCGGCCAGATCTGCCAGCTCCCCTCTCTGGC...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS-3UTR CCA 90 bp TCCTCCCAGCAGTGCACCAGTAAACTCAGATGCCTGAGTGCTTGTGGCCACCACCCCCTCGGCTGCTGCTaGGTCTGCCTGGCCATCAAG +
Preference number: 4 (lower is better)
Translates to: SSQQCTSKLRCLSACGHHPLGCC*VCLAIK
Trigger: CTTGATGGCCAGGCAGACCCAGCAGCAGCCGAGGGG...GTGGTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGTGCACTGCTGGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR TCA 90 bp GAGACACAACTGGTACCAGGCCCACCCTCTGCCATGCTGGCTCCCCTCTCAGAGAGACACCCCAACTCCTaGGCCAGCCAGAACCTAGAA +
Preference number: 4 (lower is better)
Translates to: ETQLVPGPPSAMLAPLSERHPNS*ASQNLE
Trigger: TTCTAGGTTCTGGCTGGCTCAGGAGTTGGGGTGTCT...CTCTGAGAGGGGAGCCAGCATGGCAGAGGGTGGGCCTGGTACCAGTTGTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp ACGCCCAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATGTCCCTGCCCCAAAGTaGACAGTCTGGGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: TPKSQPFPLEAKPPAHRDVPAPK*TVWASQ
Trigger: CTGGGAAGCCCAGACTGTTCACTTTGGGGCAGGGAC...ATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446026.1
ENST00000521580.3
CDS-3UTR GCA 90 bp GGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCGAGAAGCCCTGTCTaGGGAGGGCTACCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GSVNMVAGQVTTHSRTIGPRSPV*GGLPGL
Trigger: GAGCCCAGGTAGCCCTCCGCAGACAGGGCTTCTCGG...CCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS-3UTR CCA 90 bp TCCTCCCAGCAGTGCACCAGTAAACTCAGATGCCTGAGTGCTTGTGGCCACCACCAGAGGTTACTGGCCTaGGCTGACCCGACCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SSQQCTSKLRCLSACGHHQRLLA*ADPTCS
Trigger: CGAGCAGGTCGGGTCAGCCCAGGCCAGTAACCTCTG...GTGGTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGTGCACTGCTGGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS-3UTR CCA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTCTGCGGAGGGCTACCTaGGCTCCCAGACTTGGCACC +
Preference number: 4 (lower is better)
Translates to: AIPTRGQTACPQRLTANVLRRAT*APRLGT
Trigger: GGTGCCAAGTCTGGGAGCCCAGGTAGCCCTCCGCAG...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS-3UTR CCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCCCCCTCGGCTGCTGCTaGGTCTGCCTGGCCATCAAG +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTPLGCC*VCLAIK
Trigger: CTTGATGGCCAGGCAGACCCAGCAGCAGCCGAGGGG...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR TCA 90 bp ACGCCCAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATAACGTCCGTCCTCATTaGGGTGCCGAGAAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: TPKSQPFPLEAKPPAHRDNVRPH*GAEKPC
Trigger: ACAGGGCTTCTCGGCACCTCAATGAGGACGGACGTT...ATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTGGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS-3UTR GCA 90 bp CATGCAGAAAATCCGGATGGCCTGGGTTTGCTCCTCTCCAGGGATCCTCTCCAGGAAGCTCATCCAGCTTaGGATCCTCCCGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: HAENPDGLGLLLSRDPLQEAHPA*DPPGAL
Trigger: CAGAGCGCCGGGAGGATCGCAAGCTGGATGAGCTTC...CTGGAGAGGATCCCTGGAGAGGAGCAAACCCAGGCCATCCGGATTTTCTGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp AGGAGCAGCCCGTGGAAGAGGCCTTACTCCCAAAGGGGAAGCTGGATGTCAGGTAACCAGCCACTGGCCTaGGAACCTACAGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RSSPWKRPYSQRGSWMSGNQPLA*EPTVRG
Trigger: TCCCCTCACTGTAGGTTCCCAGGCCAGTGGCTGGTT...ACCTGACATCCAGCTTCCCCTTTGGGAGTAAGGCCTCTTCCACGGGCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTCTGGGCTCCCAGACTTaGCACCAGAACACCCGCCAG +
Preference number: 4 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCLGSQT*HQNTRQ
Trigger: CTGGCGGGTGTTCTGGTGCCAAGTCTGGGAGCCCAG...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS-3UTR CCA 90 bp AAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATACTTTCTGCCAGCGTGGACCCTCACCCACCTGTaGACACCATCAGGCCTCACG +
Preference number: 4 (lower is better)
Translates to: KVSHHCPLSAGLYFLPAWTLTHL*TPSGLT
Trigger: CGTGAGGCCTGATGGTGTCCACAGGTGGGTGAGGGT...CCACGCTGGCAGAAAGTATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp AAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATACTTTCTGCCAGCGTGGAAAACACAGGCCACATaGCATCTGCGGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KVSHHCPLSAGLYFLPAWKTQAT*HLRPSP
Trigger: TGGGCTGGGCCGCAGATGTCATGTGGCCTGTGTTTT...CCACGCTGGCAGAAAGTATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTGTCCCTGCCCCAAAGTaGACAGTCTGGGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: AIPTRGQTACPQRLTANVVPAPK*TVWASQ
Trigger: CTGGGAAGCCCAGACTGTTCACTTTGGGGCAGGGAC...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446026.1
ENST00000521580.3
CDS-3UTR TCA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTCTGCAGGGAGAGAAGTaGTTCCTGCCGTGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: AIPTRGQTACPQRLTANVLQGEK*FLPCSE
Trigger: CTCCGAGCACGGCAGGAATCACTTCTCTCCCTGCAG...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGAAGCTCATCCAGCTTaGGATCCTCCCGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTEAHPA*DPPGAL
Trigger: CAGAGCGCCGGGAGGATCGCAAGCTGGATGAGCTTC...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp ATGTGGGTTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGGAAGCTCATCCAGCTTaGGATCCTCCCGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: MWVLGLCQHGSRTSHHPQEAHPA*DPPGAL
Trigger: CAGAGCGCCGGGAGGATCGCAAGCTGGATGAGCTTC...CTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAACCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTCCGTCCTCATTGAGGTaGCGAGAAGCCCTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: AIPTRGQTACPQRLTANVPSSLR*REALSA
Trigger: CGCAGACAGGGCTTCTCGGCACCTCAATGAGGACGG...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS-3UTR GCA 90 bp GAAAAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTCACTGGCCCCTCGGCTaGTGCTGGGTCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: EKCFPSWGNPIPELTRQIHWPLG*CWVCLA
Trigger: GGCCAGGCAGACCCAGCAGCAGCCGAGGGGCCAGTG...AATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCACACTGGCCCCTCGGCTaGTGCTGGGTCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: KCFPSWGNPIPELTRQISHWPLG*CWVCLA
Trigger: GGCCAGGCAGACCCAGCAGCAGCCGAGGGGCCAGTG...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp TCCTCCCAGCAGTGCACCAGTAAACTCAGATGCCTGAGTGCTTGTGGCCACCACAGAGGCCAAACCGCCTaGCCACAGAGATTGACAGCC +
Preference number: 4 (lower is better)
Translates to: SSQQCTSKLRCLSACGHHRGQTA*PQRLTA
Trigger: GGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCT...GTGGTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGTGCACTGCTGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp AAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATACTTTCTGCCAGCGTGGCCAAGATCGCGCCACTaGACTCCAGCCTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: KVSHHCPLSAGLYFLPAWPRSRH*TPAWAI
Trigger: TATTGCCCAGGCTGGAGTGCAGTGGCGCGATCTTGG...CCACGCTGGCAGAAAGTATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp TTCTGGCAGCTGCCCAGCCGACTTGTGCTAACACAGCAACAGGCACAGGAAAGAGCCAACGACTCAACCTaGTCCCTCCTCTCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: FWQLPSRLVLTQQQAQERANDST*SLLSGH
Trigger: GTGGCCTGAGAGGAGGGAGCAGGTTGAGTCGTTGGC...TCTTTCCTGTGCCTGTTGCTGTGTTAGCACAAGTCGGCTGGGCAGCTGCCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTGGGAGCGGAGTGGAATaGCCTCAGGGCCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: AIPTRGQTACPQRLTANVGSGVE*PQGLLN
Trigger: ATTCAGGAGGCCCTGAGGCCATTCCACTCCGCTCCC...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CCA 90 bp TCCTCCCAGCAGTGCACCAGTAAACTCAGATGCCTGAGTGCTTGTGGCCACCACAGGACTGCCATAGGGTaGCAGCACTGGTGTGCCGAT +
Preference number: 4 (lower is better)
Translates to: SSQQCTSKLRCLSACGHHRTAIG*QHWCAD
Trigger: ATCGGCACACCAGTGCTGCCACCCTATGGCAGTCCT...GTGGTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGTGCACTGCTGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp GGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGAGCCACCACCATCATTaGGCTGGGAAGAGACGGGGG +
Preference number: 4 (lower is better)
Translates to: GSVNMVAGQVTTHSRTIGSHHHH*AGKRRG
Trigger: CCCCCGTCTCTTCCCAGCCCAATGATGGTGGTGGCT...CCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCCTGGCAGGCTTGTTCTaGCAGCTGCCCAGCCGACTT +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTLAGLF*QLPSRL
Trigger: AAGTCGGCTGGGCAGCTGCCAGAACAAGCCTGCCAG...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAACCAGCCTGGAGCCCTaGGGAGCTGACCAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTTSLEP*GADQSQ
Trigger: TTGACTCTGGTCAGCTCCCCAGGGCTCCAGGCTGGT...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CAA 72 bp CTCGGAGAGGACCCTATACTAAAGCCACCACCATCATaGGGCTGGGAAGAGACGGGGGTAAGCGGGGAGCAA +
Preference number: 4 (lower is better)
Translates to: LGEDPILKPPPS*GWEETGVSGEQ
Trigger: TTGCTCCCCGCTTACCCCCGTCTCTTCCCAGCCCAATGATGGTGGTGGCTTTAGTATAGGGTCCTCTCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTATCCTCCCGGCGCTCTaGGATGCTCTTTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCILPAL*DALFLL
Trigger: GAGGAGGAAAAGAGCATCTCAGAGCGCCGGGAGGAT...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR TCA 90 bp ATGTGGGTTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGATCCTCCCGGCGCTCTaGGATGCTCTTTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: MWVLGLCQHGSRTSHHPQILPAL*DALFLL
Trigger: GAGGAGGAAAAGAGCATCTCAGAGCGCCGGGAGGAT...CTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAACCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR TCA 90 bp TTCTGGCAGCTGCCCAGCCGACTTGTGCTAACACAGCAACAGGCACAGGAAAGAATCCTCCCGGCGCTCTaGGATGCTCTTTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FWQLPSRLVLTQQQAQERILPAL*DALFLL
Trigger: GAGGAGGAAAAGAGCATCTCAGAGCGCCGGGAGGAT...TCTTTCCTGTGCCTGTTGCTGTGTTAGCACAAGTCGGCTGGGCAGCTGCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp TCTCAGATCCTGTATTCAGGGAGACACAACTGGTACCAGGCCCACCCTCTGCCAGCTTCAGAACTGGGCTaGGAACTCAGTGCACGCCTG +
Preference number: 4 (lower is better)
Translates to: SQILYSGRHNWYQAHPLPASELG*ELSARL
Trigger: CAGGCGTGCACTGAGTTCTCAGCCCAGTTCTGAAGC...TGGCAGAGGGTGGGCCTGGTACCAGTTGTGTCTCCCTGAATACAGGATCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp GAGACACAACTGGTACCAGGCCCACCCTCTGCCATGCTGGCTCCCCTCTCAGAGATAATCTTGAAGTACTaGCAGCCAAGGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: ETQLVPGPPSAMLAPLSEIILKY*QPRLQD
Trigger: GTCCTGCAGCCTTGGCTGTCAGTACTTCAAGATTAT...CTCTGAGAGGGGAGCCAGCATGGCAGAGGGTGGGCCTGGTACCAGTTGTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAAAAACACAGGCCACATaGCATCTGCTCGCCGGGACC +
Preference number: 4 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTKTQAT*HLLAGT
Trigger: GGTCCCGGCGAGCAGATGTCATGTGGCCTGTGTTTT...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456842.1
CDS-3UTR TCA 90 bp GAAGGCCAGTCAAAAAGAGGGTCACATGCCTCCAAGGTGAATCAGCAAGCATGGAGCCACCGCAACGGCTaGTTTCAGCCAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: EGQSKRGSHASKVNQQAWSHRNG*FQPACG
Trigger: CCCACAGGCTGGCTGAAATCAGCCGTTGCGGTGGCT...CCATGCTTGCTGATTCACCTTGGAGGCATGTGACCCTCTTTTTGACTGGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp ACGCCCAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGTCTGGCCCAATTATaGCCTATCCATCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: TPKSQPFPLEAKPPAHRDCLAQL*PIHPGT
Trigger: GGTGCCTGGATGGATAGGGCATAATTGGGCCAGACA...ATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTGGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR GCA 90 bp GAGGCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTGGACAGTACGGATGGCCTGGGTTTaGTCCTCTCCAGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: EAKLGLIRGCIWSPVWTVRMAWV*SSPGIL
Trigger: GAGGATCCCTGGAGAGGAGCAAACCCAGGCCATCCG...TACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp ACGCCCAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATACTCAGATGCCTGAGTaGTTGTGGCCACCACACAAC +
Preference number: 4 (lower is better)
Translates to: TPKSQPFPLEAKPPAHRDTQMPE*LWPPHN
Trigger: GTTGTGTGGTGGCCACAAGCACTCAGGCATCTGAGT...ATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTGGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp GGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGAGAGGCCAAACCGCCTaGCCACAGAGATTGACAGCC +
Preference number: 4 (lower is better)
Translates to: GSVNMVAGQVTTHSRTIGRGQTA*PQRLTA
Trigger: GGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCT...CCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp ATGTGGGTTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGAGAGGCCAAACCGCCTaGCCACAGAGATTGACAGCC +
Preference number: 4 (lower is better)
Translates to: MWVLGLCQHGSRTSHHPQRGQTA*PQRLTA
Trigger: GGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCT...CTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAACCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCAGAGGCCAAACCGCCTaGCCACAGAGATTGACAGCC +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTRGQTA*PQRLTA
Trigger: GGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCT...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp TCCTCCCAGCAGTGCACCAGTAAACTCAGATGCCTGAGTGCTTGTGGCCACCACCCAAGAGGTGGAGGTTaGAGTGAACCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: SSQQCTSKLRCLSACGHHPRGGG*SEPRSR
Trigger: GCGCGATCTTGGTTCACTGCAACCTCCACCTCTTGG...GTGGTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGTGCACTGCTGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp ACCATCAGGCCTCACGAGAGAGAACCTAAGAAGCAGGGCCAATACCCACTCCCTGGCAGGTGTGGAGCCTaGAATCTCCTGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TIRPHEREPKKQGQYPLPGRCGA*NLLTSL
Trigger: CAAGCTGGTCAGGAGATTGCAGGCTCCACACCTGCC...AGGGAGTGGGTATTGGCCCTGCTTCTTAGGTTCTCTCTCGTGAGGCCTGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp AGGAGCAGCCCGTGGAAGAGGCCTTACTCCCAAAGGGGAAGCTGGATGTCAGGTATCCGAGGCTGCATCTaGAGTCCAGTCTGGACAGTA +
Preference number: 4 (lower is better)
Translates to: RSSPWKRPYSQRGSWMSGIRGCI*SPVWTV
Trigger: TACTGTCCAGACTGGACTCCAGATGCAGCCTCGGAT...ACCTGACATCCAGCTTCCCCTTTGGGAGTAAGGCCTCTTCCACGGGCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTATAGGGTGGCAGCACTaGTGTGCCGATAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCIGWQH*CADKAC
Trigger: GCAGGCCTTATCGGCACACCAGTGCTGCCACCCTAT...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTCCACCATCATTGGGCTaGGAAGAGACGGGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCPPSLG*EETGVS
Trigger: GCTTACCCCCGTCTCTTCCCAGCCCAATGATGGTGG...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CAA 72 bp CAGGTCTCCCATGCAGAAAATCCGGATGGCCTGGGTTaGCTCCTCTCCAGGGATCCTCTCCAGGGATGGATA +
Preference number: 4 (lower is better)
Translates to: QVSHAENPDGLG*LLSRDPLQGWI
Trigger: TATCCATCCCTGGAGAGGATCCCTGGAGAGGAGCAAACCCAGGCCATCCGGATTTTCTGCATGGGAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp AGGAGCAGCCCGTGGAAGAGGCCTTACTCCCAAAGGGGAAGCTGGATGTCAGGTGTCACAAGCCAGCCCTaGCCACAGTGTAACTACAAA +
Preference number: 4 (lower is better)
Translates to: RSSPWKRPYSQRGSWMSGVTSQP*PQCNYK
Trigger: TTTGTAGTTACACTGTGGTCAGGGCTGGCTTGTGAC...ACCTGACATCCAGCTTCCCCTTTGGGAGTAAGGCCTCTTCCACGGGCTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp TCCTCCCAGCAGTGCACCAGTAAACTCAGATGCCTGAGTGCTTGTGGCCACCACAGTGAGAGGATCACTTaGGCCCAGGAGGTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: SSQQCTSKLRCLSACGHHSERIT*AQEVKV
Trigger: AACCTTGACCTCCTGGGCTCAAGTGATCCTCTCACT...GTGGTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGTGCACTGCTGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp TTCTGGCAGCTGCCCAGCCGACTTGTGCTAACACAGCAACAGGCACAGGAAAGATCATCCCAGCAACCCTaGCCTGTCTATACCCACGTC +
Preference number: 4 (lower is better)
Translates to: FWQLPSRLVLTQQQAQERSSQQP*PVYTHV
Trigger: GACGTGGGTATAGACAGGTCAGGGTTGCTGGGATGA...TCTTTCCTGTGCCTGTTGCTGTGTTAGCACAAGTCGGCTGGGCAGCTGCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp ACGCCCAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATCACATGCCTCCAAGGTaGATCAGCAAGCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: TPKSQPFPLEAKPPAHRDHMPPR*ISKHGR
Trigger: TCTTCCATGCTTGCTGATTCACCTTGGAGGCATGTG...ATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTGGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTGAGCCTGCAATCTCCTaGCCAGCTTGTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCEPAIS*PACASW
Trigger: CCAAGAAGCACAAGCTGGTCAGGAGATTGCAGGCTC...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp GGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCTGCGTGTGGTCCTTaGCTAGAAGCTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSVNMVAGQVTTHSRTIGPACGP*LEAHPA
Trigger: AGCTGGATGAGCTTCTAGGCAAGGACCACACGCAGG...CCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCCCTGCGTGTGGTCCTTaGCTAGAAGCTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTPACGP*LEAHPA
Trigger: AGCTGGATGAGCTTCTAGGCAAGGACCACACGCAGG...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp ACAGCAGCTCATTTCCGCATTCCCACTAGGCCTCAGGGAGCCTTAGAAGAAGCCCCTGCGTGTGGTCCTTaGCTAGAAGCTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: TAAHFRIPTRPQGALEEAPACGP*LEAHPA
Trigger: AGCTGGATGAGCTTCTAGGCAAGGACCACACGCAGG...GGCTTCTTCTAAGGCTCCCTGAGGCCTAGTGGGAATGCGGAAATGAGCTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp AATCAAAGTGAGACTGGAAGAAGGGAGCCACCTGGATTCCCAAAGATAGGGCTCAGGCCACATGACATCTaGGGCCCAGCCCACACTCCC +
Preference number: 4 (lower is better)
Translates to: NQSETGRREPPGFPKIGLRPHDI*GPAHTP
Trigger: GGGAGTGTGGGCTGGGCCGCAGATGTCATGTGGCCT...GAGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTTCCAGTCTCACTTTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp GTGCACGCCTGCACGGGACAGCCTCAAGGAACATATGTGCATGCTGACACAAGTGCACAGCCAGCTGTCTaGAGCTGCAGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: VHACTGQPQGTYVHADTSAQPAV*SCSFPH
Trigger: ATGTGGAAAGCTGCAGCTGCAGACAGCTGGCTGTGC...ACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCCCGTGCAGGCGTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp AAGTCTCAGAATGTTAGGCAGAAAGATCCCAGAAGTTCAGAGGGGCACTCACCTACCAGGCCCACCCTCTaGCATGCTGGCTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: KSQNVRQKDPRSSEGHSPTRPTL*HAGSPL
Trigger: GAGAGGGGAGCCAGCATGGCAGAGGGTGGGCCTGGT...AGGTGAGTGCCCCTCTGAACTTCTGGGATCTTTCTGCCTAACATTCTGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp GGACAGCCTCAAGGAACATATGTGCATGCTGACACAAGTCCAGCTGGCCGTCCTACTGACAGCCAAGGCTaGAGGACTAGGGAACAGCTG +
Preference number: 4 (lower is better)
Translates to: GQPQGTYVHADTSPAGRPTDSQG*RTREQL
Trigger: CAGCTGTTCCCTAGTCCTGCAGCCTTGGCTGTCAGT...AGGACGGCCAGCTGGACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCCCACCACACAACAGATaGGGCCTTCCTCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTPPHNR*GLPLHW
Trigger: CCAGTGAAGAGGAAGGCCGCATCTGTTGTGTGGTGG...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp ACGCCCAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATACCAGTAAACTCAGATaGCTGAGTGCTTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: TPKSQPFPLEAKPPAHRDTSKLR*LSACGH
Trigger: GTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGT...ATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTGGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp TCCTCCCAGCAGTGCACCAGTAAACTCAGATGCCTGAGTGCTTGTGGCCACCACCTCTCCTCCCAGCAGTaGACCAGTAAACTCAGATGC +
Preference number: 4 (lower is better)
Translates to: SSQQCTSKLRCLSACGHHLSSQQ*TSKLRC
Trigger: GCATCTGAGTTTACTGGTGCACTGCTGGGAGGAGAG...GTGGTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGTGCACTGCTGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCGCTCACCTCCTGCTGTaGAGCCCAGTTTCTAATGGG +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTAHLLL*SPVSNG
Trigger: CCCATTAGAAACTGGGCTGCACAGCAGGAGGTGAGC...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR GCA 90 bp ACCATCAGGCCTCACGAGAGAGAACCTAAGAAGCAGGGCCAATACCCACTCCCTCCAGGAGGCAGAAGTTaGAGTCAGCCAAGATCACGC +
Preference number: 4 (lower is better)
Translates to: TIRPHEREPKKQGQYPLPPGGRS*SQPRSR
Trigger: GCGTGATCTTGGCTGACTGCAACTTCTGCCTCCTGG...AGGGAGTGGGTATTGGCCCTGCTTCTTAGGTTCTCTCTCGTGAGGCCTGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACATTTCCTCTGCTACACTaGCCTGGCTCCCTACCCTAC +
Preference number: 4 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTFPLLH*PGSLPY
Trigger: GTAGGGTAGGGAGCCAGGGCAGTGTAGCAGAGGAAA...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp ATGTGGGTTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGCTCACCACCTGCGTGTaGTCCTTGCCTAGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: MWVLGLCQHGSRTSHHPQLTTCV*SLPRSS
Trigger: TGAGCTTCTAGGCAAGGACCACACGCAGGTGGTGAG...CTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAACCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CCA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTCTCACCACCTGCGTGTaGTCCTTGCCTAGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: AIPTRGQTACPQRLTANVLTTCV*SLPRSS
Trigger: TGAGCTTCTAGGCAAGGACCACACGCAGGTGGTGAG...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CCA 90 bp TCTCAGATCCTGTATTCAGGGAGACACAACTGGTACCAGGCCCACCCTCTGCCAAAGGCAGAACCAGGCTaGGAGATGGACCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SQILYSGRHNWYQAHPLPKAEPG*EMDPAL
Trigger: CAAAGCAGGGTCCATCTCCCAGCCTGGTTCTGCCTT...TGGCAGAGGGTGGGCCTGGTACCAGTTGTGTCTCCCTGAATACAGGATCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp CATGCAGAAAATCCGGATGGCCTGGGTTTGCTCCTCTCCAGGGATCCTCTCCAGCAGGCTGGAGTGCAGTaGTGCAATCTCGACTCACTT +
Preference number: 4 (lower is better)
Translates to: HAENPDGLGLLLSRDPLQQAGVQ*CNLDSL
Trigger: AAGTGAGTCGAGATTGCACCACTGCACTCCAGCCTG...CTGGAGAGGATCCCTGGAGAGGAGCAAACCCAGGCCATCCGGATTTTCTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp GAAAAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTCCCCTCGGCTGCTGCTaGGTCTGCCTGGCCATCAAG +
Preference number: 4 (lower is better)
Translates to: EKCFPSWGNPIPELTRQIPLGCC*VCLAIK
Trigger: CTTGATGGCCAGGCAGACCCAGCAGCAGCCGAGGGG...AATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CCA 90 bp TCCTCCCAGCAGTGCACCAGTAAACTCAGATGCCTGAGTGCTTGTGGCCACCACTGTCAGGCACGATGCTaGCTTACCCTGTCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: SSQQCTSKLRCLSACGHHCQARC*LTLSAF
Trigger: AAACGCAGACAGGGTAAGCCAGCATCGTGCCTGACA...GTGGTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGTGCACTGCTGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CCA 90 bp GGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGTCCACAGATGGGGGTTaGAGAGGGATGGTTTCGGGA +
Preference number: 4 (lower is better)
Translates to: GSVNMVAGQVTTHSRTIGSTDGG*RGMVSG
Trigger: TCCCGAAACCATCCCTCTCCAACCCCCATCTGTGGA...CCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAAGTCAAAAGGCTCCCTaGCAGGCTTGTTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTSQKAP*QACSGS
Trigger: GCTGCCAGAACAAGCCTGCCAGGGAGCCTTTTGACT...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCTCTGCTACACTGCCCTaGCTCCCTACCCTACAAGTG +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTSATLP*LPTLQV
Trigger: CACTTGTAGGGTAGGGAGCCAGGGCAGTGTAGCAGA...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp TTCTGGCAGCTGCCCAGCCGACTTGTGCTAACACAGCAACAGGCACAGGAAAGAACCTCCTGGGCATTCTaGCCAATCTGCTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: FWQLPSRLVLTQQQAQERTSWAF*PICFPL
Trigger: CAGAGGGAAGCAGATTGGCCAGAATGCCCAGGAGGT...TCTTTCCTGTGCCTGTTGCTGTGTTAGCACAAGTCGGCTGGGCAGCTGCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp AGTGGGGAGCAGGTATTCGGTTCTGATGCCCAGAGTGGCTGTCCCCACCATTTCCTGGTCTCAAACTCCTaGCTTCAAATGATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SGEQVFGSDAQSGCPHHFLVSNS*LQMICP
Trigger: CGGGCAGATCATTTGAAGTCAGGAGTTTGAGACCAG...GAAATGGTGGGGACAGCCACTCTGGGCATCAGAACCGAATACCTGCTCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCGTAAACTCAGATGCCTaGGTGCTTGTGGCCACCACA +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTVNSDA*VLVATT
Trigger: TGTGGTGGCCACAAGCACTCAGGCATCTGAGTTTAC...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR TCA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTGTAAACTCAGATGCCTaGGTGCTTGTGGCCACCACA +
Preference number: 4 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCVNSDA*VLVATT
Trigger: TGTGGTGGCCACAAGCACTCAGGCATCTGAGTTTAC...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR TCA 90 bp ACCATCAGGCCTCACGAGAGAGAACCTAAGAAGCAGGGCCAATACCCACTCCCTGTAAACTCAGATGCCTaGGTGCTTGTGGCCACCACA +
Preference number: 4 (lower is better)
Translates to: TIRPHEREPKKQGQYPLPVNSDA*VLVATT
Trigger: TGTGGTGGCCACAAGCACTCAGGCATCTGAGTTTAC...AGGGAGTGGGTATTGGCCCTGCTTCTTAGGTTCTCTCTCGTGAGGCCTGATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp TCCTCCCAGCAGTGCACCAGTAAACTCAGATGCCTGAGTGCTTGTGGCCACCACGAGTTTGCACTCCTGTaGGAATCTAATGCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSQQCTSKLRCLSACGHHEFALL*ESNAAA
Trigger: AGCAGCGGCATTAGATTCTCACAGGAGTGCAAACTC...GTGGTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGTGCACTGCTGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR TCA 90 bp GACTCTGGCAAGGCTAATTCCATGATGTTTCACTCAGCGGCAGTCCCACCAGCCCTTGAGGAGCTGAAGTaGGAGGATCACTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: DSGKANSMMFHSAAVPPALEELK*EDHLSP
Trigger: TGGGCTCAAGTGATCCTCTCACTTCAGCTCCTCAAG...GGCTGGTGGGACTGCCGCTGAGTGAAACATCATGGAATTAGCCTTGCCAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp ATGTGGGTTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGGGCTCATTTGTCACCTaGCCTCTGTCAGCACTAGTG +
Preference number: 4 (lower is better)
Translates to: MWVLGLCQHGSRTSHHPQGSFVT*PLSALV
Trigger: CACTAGTGCTGACAGAGGTCAGGTGACAAATGAGCC...CTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAACCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp GGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGTTAAGGCTCACCACCTaGGTGTGGTCCTTGCCTAGA +
Preference number: 4 (lower is better)
Translates to: GSVNMVAGQVTTHSRTIGLRLTT*VWSLPR
Trigger: TCTAGGCAAGGACCACACGCAGGTGGTGAGCCTTAA...CCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp AGTGGGGAGCAGGTATTCGGTTCTGATGCCCAGAGTGGCTGTCCCCACCATTTCAGTAGGCTCCCAGACTaGAGTGGAAAACACAGACCA +
Preference number: 4 (lower is better)
Translates to: SGEQVFGSDAQSGCPHHFSRLPD*SGKHRP
Trigger: TGGTCTGTGTTTTCCACTGCAGTCTGGGAGCCTACT...GAAATGGTGGGGACAGCCACTCTGGGCATCAGAACCGAATACCTGCTCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp ATGTGGGTTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGACTCAGATGCCTGAGTaGTTGTGGCCACCACACAAC +
Preference number: 4 (lower is better)
Translates to: MWVLGLCQHGSRTSHHPQTQMPE*LWPPHN
Trigger: GTTGTGTGGTGGCCACAAGCACTCAGGCATCTGAGT...CTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAACCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp GGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGACTCAGATGCCTGAGTaGTTGTGGCCACCACACAAC +
Preference number: 4 (lower is better)
Translates to: GSVNMVAGQVTTHSRTIGTQMPE*LWPPHN
Trigger: GTTGTGTGGTGGCCACAAGCACTCAGGCATCTGAGT...CCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTCTCTCCTCCCAGCAGTaGACCAGTAAACTCAGATGC +
Preference number: 4 (lower is better)
Translates to: AIPTRGQTACPQRLTANVLSSQQ*TSKLRC
Trigger: GCATCTGAGTTTACTGGTGCACTGCTGGGAGGAGAG...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp ACGCCCAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATCTCTCGCTACCGTCCTaGTCACATTCTAATCATTCC +
Preference number: 4 (lower is better)
Translates to: TPKSQPFPLEAKPPAHRDLSLPS*SHSNHS
Trigger: GGAATGATTAGAATGTGAGCAGGACGGTAGCGAGAG...ATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTGGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR GCA 90 bp ATGTGGGTTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGGCACATGTTCGTCCCTaGCCCAAAGTGAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: MWVLGLCQHGSRTSHHPQAHVRP*PKVNSL
Trigger: CAGACTGTTCACTTTGGGGCAGGGACGAACATGTGC...CTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAACCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446026.1
ENST00000521580.3
CDS-3UTR GCA 90 bp TTCTGGCAGCTGCCCAGCCGACTTGTGCTAACACAGCAACAGGCACAGGAAAGAGCACATGTTCGTCCCTaGCCCAAAGTGAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: FWQLPSRLVLTQQQAQERAHVRP*PKVNSL
Trigger: CAGACTGTTCACTTTGGGGCAGGGACGAACATGTGC...TCTTTCCTGTGCCTGTTGCTGTGTTAGCACAAGTCGGCTGGGCAGCTGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp TTCTGGCAGCTGCCCAGCCGACTTGTGCTAACACAGCAACAGGCACAGGAAAGAGCCTCCAGGGTTCAGTaGAACCGCACTAGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: FWQLPSRLVLTQQQAQERASRVQ*NRTSKA
Trigger: TGCTTTACTAGTGCGGTTGCACTGAACCCTGGAGGC...TCTTTCCTGTGCCTGTTGCTGTGTTAGCACAAGTCGGCTGGGCAGCTGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp GACTCTGGCAAGGCTAATTCCATGATGTTTCACTCAGCGGCAGTCCCACCAGCCGGAAGAAAACCGGTCTaGACCTTGGTTCATCCCAGC +
Preference number: 4 (lower is better)
Translates to: DSGKANSMMFHSAAVPPAGRKPV*TLVHPS
Trigger: GCTGGGATGAACCAAGGTGCAGACCGGTTTTCTTCC...GGCTGGTGGGACTGCCGCTGAGTGAAACATCATGGAATTAGCCTTGCCAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTCAGACACTGAACCGCTaGAGGGAGAGAAGTGATTCC +
Preference number: 4 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCQTLNR*RERSDS
Trigger: GGAATCACTTCTCTCCCTGCAGCGGTTCAGTGTCTG...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp GTGCACGCCTGCACGGGACAGCCTCAAGGAACATATGTGCATGCTGACACAAGTGTAGGCAGAGCCTGGTaGCAGAGGACTATCAGTATC +
Preference number: 4 (lower is better)
Translates to: VHACTGQPQGTYVHADTSVGRAW*QRTISI
Trigger: GATACTGATAGTCCTCTGCCACCAGGCTCTGCCTAC...ACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCCCGTGCAGGCGTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTATGCCTGAGTGCTTGTaGCCACCACACAACAGATGC +
Preference number: 4 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCMPECL*PPHNRC
Trigger: GCATCTGTTGTGTGGTGGCCACAAGCACTCAGGCAT...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CCA 90 bp ATGTGGGTTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGATGCCTGAGTGCTTGTaGCCACCACACAACAGATGC +
Preference number: 4 (lower is better)
Translates to: MWVLGLCQHGSRTSHHPQMPECL*PPHNRC
Trigger: GCATCTGTTGTGTGGTGGCCACAAGCACTCAGGCAT...CTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAACCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR TCA 90 bp AAGGGGAAGCTGGATGTCAGGTTCTTATCCCAGTGCAGAAGACTAGGTAAAATCGCTGGGCTGTGCAACTaGGAGGAGTGGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: KGKLDVRFLSQCRRLGKIAGLCN*EEWGAG
Trigger: ACCTGCTCCCCACTCCTCTCAGTTGCACAGCCCAGC...GATTTTACCTAGTCTTCTGCACTGGGATAAGAACCTGACATCCAGCTTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACACCTGCCCACAGAGATTaGCAGCCAATGTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTPAHRD*QPMFIS
Trigger: TGAGATGAACATTGGCTGTCAATCTCTGTGGGCAGG...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR TCA 90 bp ATGTGGGTTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGCCTGCCCACAGAGATTaGCAGCCAATGTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: MWVLGLCQHGSRTSHHPQPAHRD*QPMFIS
Trigger: TGAGATGAACATTGGCTGTCAATCTCTGTGGGCAGG...CTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAACCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR TCA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTCCTGCCCACAGAGATTaGCAGCCAATGTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCPAHRD*QPMFIS
Trigger: TGAGATGAACATTGGCTGTCAATCTCTGTGGGCAGG...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR TCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACACAGTTTCTAATGGGCTaGAGACCACCACTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTQFLMG*RPPLVC
Trigger: ACAGACCAGTGGTGGTCTTCAGCCCATTAGAAACTG...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR TCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCCAGGGCCTCCTGAATTaGAGTAGGGCAATACCAAAG +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTQGLLN*SRAIPK
Trigger: CTTTGGTATTGCCCTACTTCAATTCAGGAGGCCCTG...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR TCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGGGGAATCCCATTCCTaGGCTGACAAGACAGATTTC +
Preference number: 4 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTGESHS*ADKTDF
Trigger: GAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCC...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR TCA 90 bp ACCATCAGGCCTCACGAGAGAGAACCTAAGAAGCAGGGCCAATACCCACTCCCTAAGGAGGAGGCAGTTTaGGAGGTCACAAATTGGCAG +
Preference number: 4 (lower is better)
Translates to: TIRPHEREPKKQGQYPLPKEEAV*EVTNWQ
Trigger: CTGCCAATTTGTGACCTCTCAAACTGCCTCCTCCTT...AGGGAGTGGGTATTGGCCCTGCTTCTTAGGTTCTCTCTCGTGAGGCCTGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp ATGAGCAGCAGATTGGAAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATAAATTCTCCTGATCTGTaGCCTCCTGGGCATTCTGGC +
Preference number: 4 (lower is better)
Translates to: MSSRLEGESPLPPFGRSINSPDL*PPGHSG
Trigger: GCCAGAATGCCCAGGAGGTCACAGATCAGGAGAATT...TATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTTCCAATCTGCTGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp CGTGGAAGAGGCCTTACTCCCAAAGGGGAAGCTGGATGTCAGGTTCTTATCCCAAGATGGACCCTGCTTTaGAGGTGGCTAAGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: RGRGLTPKGEAGCQVLIPRWTLL*RWLSRE
Trigger: CTCCCTACTTAGCCACCTGCAAAGCAGGGTCCATCT...TGGGATAAGAACCTGACATCCAGCTTCCCCTTTGGGAGTAAGGCCTCTTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp GCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTGGACAGTAATTAACTCAGTGCACGCCTaGACGGGACAGCCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: AKLGLIRGCIWSPVWTVINSVHA*TGQPQG
Trigger: TCCTTGAGGCTGTCCCGTGCAGGCGTGCACTGAGTT...AATTACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp AAGGGGAAGCTGGATGTCAGGTTCTTATCCCAGTGCAGAAGACTAGGTAAAATCGGGCTGAGAACTCAGTaGACGCCTGCACGGGACAGC +
Preference number: 4 (lower is better)
Translates to: KGKLDVRFLSQCRRLGKIGLRTQ*TPARDS
Trigger: GCTGTCCCGTGCAGGCGTGCACTGAGTTCTCAGCCC...GATTTTACCTAGTCTTCTGCACTGGGATAAGAACCTGACATCCAGCTTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp GAGGCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTGGACAGTAGCTGGAGTGCAGTGGTaGAATCTCGACTCACTTCAG +
Preference number: 4 (lower is better)
Translates to: EAKLGLIRGCIWSPVWTVAGVQW*NLDSLQ
Trigger: CTGAAGTGAGTCGAGATTGCACCACTGCACTCCAGC...TACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCACCAGTAAACTCAGATaGCTGAGTGCTTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTTSKLR*LSACGH
Trigger: GTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGT...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTACCAGTAAACTCAGATaGCTGAGTGCTTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: AIPTRGQTACPQRLTANVTSKLR*LSACGH
Trigger: GTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGT...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp GAAGGCCAGTCAAAAAGAGGGTCACATGCCTCCAAGGTGAATCAGCAAGCATGGTGTGCCGATAAGGCCTaGTCATCAGCCAGAACCTGC +
Preference number: 4 (lower is better)
Translates to: EGQSKRGSHASKVNQQAWCADKA*SSARTC
Trigger: GCAGGTTCTGGCTGATGAGCAGGCCTTATCGGCACA...CCATGCTTGCTGATTCACCTTGGAGGCATGTGACCCTCTTTTTGACTGGCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCATTCTGGCCAATCTaGTTCCCTCTGACTTTGCAG +
Preference number: 4 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTAFWPI*FPLTLQ
Trigger: CTGCAAAGTCAGAGGGAAGCAGATTGGCCAGAATGC...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp GTGCACGCCTGCACGGGACAGCCTCAAGGAACATATGTGCATGCTGACACAAGTCATGTAGTGTCTTCATaGGTGGGGTTAGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: VHACTGQPQGTYVHADTSHVVSS*VGLGPS
Trigger: TGAAGGCCCTAACCCCACCCATGAAGACACTACATG...ACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCCCGTGCAGGCGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAACCACCACTGGTCTGTaGCCCAGGGGGTTAAGGACC +
Preference number: 4 (lower is better)
Translates to: KCFPSWGNPIPELTRQISTTTGL*PRGLRT
Trigger: GGTCCTTAACCCCCTGGGCCACAGACCAGTGGTGGT...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CCA 90 bp GGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGGGCCACATGACATTCTaGATACCGCAGAACCTGAAG +
Preference number: 4 (lower is better)
Translates to: GSVNMVAGQVTTHSRTIGGHMTF*IPQNLK
Trigger: CTTCAGGTTCTGCGGTATCCAGAATGTCATGTGGCC...CCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CCA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGAAGGCACCTCCAGCTaGCACCTCTTCACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: KCFPSWGNPIPELTRQISEGTSS*HLFTAG
Trigger: GCCAGCTGTGAAGAGGTGCCAGCTGGAGGTGCCTTC...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCTACTTTCTGCCAGCGTaGTGGCTCATTTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTYFLPA*WLICHL
Trigger: CAGGTGACAAATGAGCCACCACGCTGGCAGAAAGTA...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACATACATTTTCACTGCCTaGCTCCCAACCCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTYIFTA*LPTQTL
Trigger: CAGAGTCTGGGTTGGGAGCCAGGCAGTGAAAATGTA...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp TGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGTAATCCTCCCGGCGCTCTaGGATGCTCTTTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CFPSWGNPIPELTRQISVILPAL*DALFLL
Trigger: GAGGAGGAAAAGAGCATCTCAGAGCGCCGGGAGGAT...TACTGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR TCA 90 bp AAGTCTCAGAATGTTAGGCAGAAAGATCCCAGAAGTTCAGAGGGGCACTCACCTAAAACACAGGCCACATaGCATCTGCGGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KSQNVRQKDPRSSEGHSPKTQAT*HLRPSP
Trigger: TGGGCTGGGCCGCAGATGTCATGTGGCCTGTGTTTT...AGGTGAGTGCCCCTCTGAACTTCTGGGATCTTTCTGCCTAACATTCTGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp TCTCAGATCCTGTATTCAGGGAGACACAACTGGTACCAGGCCCACCCTCTGCCAACAGCTCCAAGGAGATaGGGCCAAATTGGGTCTAAT +
Preference number: 4 (lower is better)
Translates to: SQILYSGRHNWYQAHPLPTAPRR*GQIGSN
Trigger: ATTAGACCCAATTTGGCCTCATCTCCTTGGAGCTGT...TGGCAGAGGGTGGGCCTGGTACCAGTTGTGTCTCCCTGAATACAGGATCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTAAAACACAGGCCACATaGCATCTCATTCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: AIPTRGQTACPQRLTANVKTQAT*HLIHGL
Trigger: GAGGCCATGAATGAGATGTCATGTGGCCTGTGTTTT...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS-3UTR TCA 90 bp ATGAGCAGCAGATTGGAAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATACCTGCCCACAGAGATTaGCAGCCAATGTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: MSSRLEGESPLPPFGRSIPAHRD*QPMFIS
Trigger: TGAGATGAACATTGGCTGTCAATCTCTGTGGGCAGG...TATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTTCCAATCTGCTGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTGAGGCCAACGGGTGGTaGCAGGGATATTTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCEANGW*QGYFKR
Trigger: TCTTTTAAAATATCCCTGTCACCACCCGTTGGCCTC...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCACTCATGTGTTTCAGTaGACTGTGACTGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTTHVFQ*TVTGRP
Trigger: TGGCCTTCCAGTCACAGTTCACTGAAACACATGAGT...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp GAAAAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTCCCTCCCAATTCTCCTaGTCTGTGACCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: EKCFPSWGNPIPELTRQIPSQFS*SVTSWA
Trigger: TGCCCAGGAGGTCACAGATCAGGAGAATTGGGAGGG...AATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGCACCTCTCCTACCCTaGCTGGCAGAGTGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: KCFPSWGNPIPELTRQISAPLLP*LAECPK
Trigger: TTTTGGGCACTCTGCCAGGCAGGGTAGGAGAGGTGC...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR GCA 90 bp CATGCAGAAAATCCGGATGGCCTGGGTTTGCTCCTCTCCAGGGATCCTCTCCAGGATGTTCATGTGTCTTaGAGGTATGGAATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HAENPDGLGLLLSRDPLQDVHVS*RYGIWR
Trigger: CCTCCAGATTCCATACCTGCAAGACACATGAACATC...CTGGAGAGGATCCCTGGAGAGGAGCAAACCCAGGCCATCCGGATTTTCTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp GTGCACGCCTGCACGGGACAGCCTCAAGGAACATATGTGCATGCTGACACAAGTGCTTCACAGCCTGTCTaGTCCTTTCTAAACAGACAG +
Preference number: 4 (lower is better)
Translates to: VHACTGQPQGTYVHADTSASQPV*SFLNRQ
Trigger: CTGTCTGTTTAGAAAGGAGCAGACAGGCTGTGAAGC...ACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCCCGTGCAGGCGTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACACCCAGAACAGAAAAGTaGTTTCCTTCCTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTPRTEK*FPSWGN
Trigger: ATTCCCCCAGGAAGGAAAGCACTTTTCTGTTCTGGG...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTCCCAGAACAGAAAAGTaGTTTCCTTCCTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: AIPTRGQTACPQRLTANVPRTEK*FPSWGN
Trigger: ATTCCCCCAGGAAGGAAAGCACTTTTCTGTTCTGGG...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACATCATCAGCCAGAACCTaGAGCCAGAACCAGAAATCT +
Preference number: 4 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTSSART*SQNQKS
Trigger: AGATTTCTGGTTCTGGCTGCAGGTTCTGGCTGATGA...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp GAAAAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTGGTAATGCCCAGGACTaGCATAGGGTGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: EKCFPSWGNPIPELTRQIGNAQD*HRVAAL
Trigger: CAGTGCTGCCACCCTATGGCAGTCCTGGGCATTACC...AATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp TGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGTAGAGAGAAGTGATTCCTaGCGTGCTCGGAGAGGACCC +
Preference number: 4 (lower is better)
Translates to: CFPSWGNPIPELTRQISVERSDS*RARRGP
Trigger: GGGTCCTCTCCGAGCACGGCAGGAATCACTTCTCTC...TACTGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp GACTCTGGCAAGGCTAATTCCATGATGTTTCACTCAGCGGCAGTCCCACCAGCCACTTTATTTTTCCTCTaGTACACTGCCCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: DSGKANSMMFHSAAVPPATLFFL*YTALAP
Trigger: GGGAGCCAGGGCAGTGTAGCAGAGGAAAAATAAAGT...GGCTGGTGGGACTGCCGCTGAGTGAAACATCATGGAATTAGCCTTGCCAGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp ATGAGCAGCAGATTGGAAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATAACACGTTCCCCATTTTaGAGGGAAACCAAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: MSSRLEGESPLPPFGRSITRSPF*RETKAS
Trigger: ACTGGCCTTGGTTTCCCTGCAAAATGGGGAACGTGT...TATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTTCCAATCTGCTGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp AAAAGGGAGAGTGGGCCCATGTCCCCTTTCCTTTCAGAATGGGCAGAAGATTCAGCACAAAACGGCTGCTaGAGCCTCACAGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: KRESGPMSPFLSEWAEDSAQNGC*SLTASF
Trigger: GAATGAGGCTGTGAGGCTCCAGCAGCCGTTTTGTGC...TGAATCTTCTGCCCATTCTGAAAGGAAAGGGGACATGGGCCCACTCTCCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp GCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTGGACAGTAATTACCCTGCTTTGCAGGTaGCTAAGTAGGGAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: AKLGLIRGCIWSPVWTVITLLCR*LSREQR
Trigger: ACGCTGCTCCCTACTTAGCCACCTGCAAAGCAGGGT...AATTACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp GTGCACGCCTGCACGGGACAGCCTCAAGGAACATATGTGCATGCTGACACAAGTGGACTAGGGAACAGCTaGGGAAGTCTCAGAATGTTA +
Preference number: 4 (lower is better)
Translates to: VHACTGQPQGTYVHADTSGLGNS*GSLRML
Trigger: TAACATTCTGAGACTTCCCCAGCTGTTCCCTAGTCC...ACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCCCGTGCAGGCGTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAATGACATCTCATTCATaGCCTCATCAACGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTMTSHS*PHQRPS
Trigger: GGACGGACGTTGATGAGGCCATGAATGAGATGTCAT...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS-3UTR CCA 90 bp TCCTCCCAGCAGTGCACCAGTAAACTCAGATGCCTGAGTGCTTGTGGCCACCACATTAGATGTGGGTTCTaGGGCTCTGTCAACATGGTA +
Preference number: 4 (lower is better)
Translates to: SSQQCTSKLRCLSACGHHIRCGF*GSVNMV
Trigger: TACCATGTTGACAGAGCCCCAGAACCCACATCTAAT...GTGGTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGTGCACTGCTGGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CCA 90 bp AAAATAGTGAAGGGAGCCAGGTGCATATTTGAATTCTTTCCAGTGCAGACTGGACCCCTCGGCTGCTGCTaGGTCTGCCTGGCCATCAAG +
Preference number: 4 (lower is better)
Translates to: KIVKGARCIFEFFPVQTGPLGCC*VCLAIK
Trigger: CTTGATGGCCAGGCAGACCCAGCAGCAGCCGAGGGG...TCCAGTCTGCACTGGAAAGAATTCAAATATGCACCTGGCTCCCTTCACTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACATCCCCAATCTATATTTaGCACCAGGGACCAGTTTCG +
Preference number: 4 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTSPIYI*HQGPVS
Trigger: CGAAACTGGTCCCTGGTGCCAAATATAGATTGGGGA...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CCA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTGTTTCCAGGGCTCCTTaGCACCCTTTAATACCAATG +
Preference number: 4 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCVSRAP*HPLIPM
Trigger: CATTGGTATTAAAGGGTGCCAAGGAGCCCTGGAAAC...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp GACTCTGGCAAGGCTAATTCCATGATGTTTCACTCAGCGGCAGTCCCACCAGCCATCCGATTTGTTCCCTaGGAAGCAACAGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: DSGKANSMMFHSAAVPPAIRFVP*EATAAH
Trigger: ATGAGCTGCTGTTGCTTCCCAGGGAACAAATCGGAT...GGCTGGTGGGACTGCCGCTGAGTGAAACATCATGGAATTAGCCTTGCCAGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp ATACCTGTGTACTTGAGGACATGCAATGTCATTCATACTGATCCCCCTCCTAGCATCCTCCCGGCGCTCTaGGATGCTCTTTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: IPVYLRTCNVIHTDPPPSILPAL*DALFLL
Trigger: GAGGAGGAAAAGAGCATCTCAGAGCGCCGGGAGGAT...GCTAGGAGGGGGATCAGTATGAATGACATTGCATGTCCTCAAGTACACAGGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp GCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTGGACAGTAATTCTTCTGCCCCAGCACTaGAAAGAATCCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: AKLGLIRGCIWSPVWTVILLPQH*KESCRA
Trigger: AGCTCTGCAGGATTCTTTTCAGTGCTGGGGCAGAAG...AATTACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp AAGGGGAAGCTGGATGTCAGGTTCTTATCCCAGTGCAGAAGACTAGGTAAAATCGCAGGTATTCGGTTCTaGTGCCCAGAGTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KGKLDVRFLSQCRRLGKIAGIRF*CPEWLS
Trigger: GGACAGCCACTCTGGGCATCAGAACCGAATACCTGC...GATTTTACCTAGTCTTCTGCACTGGGATAAGAACCTGACATCCAGCTTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp ACGCCCAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATAAAACATATCGCGCATaGGTTCACAACTATCTCTCA +
Preference number: 4 (lower is better)
Translates to: TPKSQPFPLEAKPPAHRDKTYRA*VHNYLS
Trigger: TGAGAGATAGTTGTGAACTCATGCGCGATATGTTTT...ATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTGGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR TCA 90 bp ACGCCCAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATATCTCTGATCTAAAGTaGACAATCGAAACCTCACCA +
Preference number: 4 (lower is better)
Translates to: TPKSQPFPLEAKPPAHRDISDLK*TIETSP
Trigger: TGGTGAGGTTTCGATTGTTCACTTTAGATCAGAGAT...ATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTGGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR TCA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTAGCCAGGTGCATATTTaGATTCTTTCCAGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: AIPTRGQTACPQRLTANVSQVHI*ILSSAD
Trigger: GTCTGCACTGGAAAGAATTCAAATATGCACCTGGCT...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR TCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGGGGGTAGAAGATGGTaGCTGTTTTCAAGCAAATTC +
Preference number: 4 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTGGRRW*LFSSKF
Trigger: GAATTTGCTTGAAAACAGTCACCATCTTCTACCCCC...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446026.1
ENST00000521580.3
CDS-3UTR TCA 90 bp GACTCTGGCAAGGCTAATTCCATGATGTTTCACTCAGCGGCAGTCCCACCAGCCAGAGGAAGAATTCAGTaGCAAAGTGCCCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: DSGKANSMMFHSAAVPPARGRIQ*QSALGK
Trigger: CTTTCCAAGGGCACTTTGTCACTGAATTCTTCCTCT...GGCTGGTGGGACTGCCGCTGAGTGAAACATCATGGAATTAGCCTTGCCAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp AAAATAGTGAAGGGAGCCAGGTGCATATTTGAATTCTTTCCAGTGCAGACTGGAGGAGCCCTGGGGAGCTaGCCAGAGTCAAAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: KIVKGARCIFEFFPVQTGGALGS*PESKGS
Trigger: GGAGCCTTTTGACTCTGGTCAGCTCCCCAGGGCTCC...TCCAGTCTGCACTGGAAAGAATTCAAATATGCACCTGGCTCCCTTCACTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAACTGCTGGAACAGGATaGAAACTGATACACCGGTTA +
Preference number: 4 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTTAGTG*KLIHRL
Trigger: TAACCGGTGTATCAGTTTTCATCCTGTTCCAGCAGT...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCACCTGCGTGTGGTCCTTaGCTAGAAGCTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: KCFPSWGNPIPELTRQISPACGP*LEAHPA
Trigger: AGCTGGATGAGCTTCTAGGCAAGGACCACACGCAGG...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp CGTGGAAGAGGCCTTACTCCCAAAGGGGAAGCTGGATGTCAGGTTCTTATCCCAAGAGGTTTGTGCGTGTaGGTAGACACATACCTGTGT +
Preference number: 4 (lower is better)
Translates to: RGRGLTPKGEAGCQVLIPRGLCV*VDTYLC
Trigger: ACACAGGTATGTGTCTACGCACACGCACAAACCTCT...TGGGATAAGAACCTGACATCCAGCTTCCCCTTTGGGAGTAAGGCCTCTTCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCCGTCCACATAAACCTTaGTATCTAATGTCACCCGAG +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTRPHKP*YLMSPE
Trigger: CTCGGGTGACATTAGATAGCAAGGTTTATGTGGACG...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp TTCTGGCAGCTGCCCAGCCGACTTGTGCTAACACAGCAACAGGCACAGGAAAGAGCTTCTTGGTTCTTATaGAAGCCAGTTCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FWQLPSRLVLTQQQAQERASWFL*KPVLSV
Trigger: CACAGAGAGAACTGGCTTGCATAAGAACCAAGAAGC...TCTTTCCTGTGCCTGTTGCTGTGTTAGCACAAGTCGGCTGGGCAGCTGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp GGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGTCTGACTTTGCAGACTaGACTGATGGAACTACCACT +
Preference number: 4 (lower is better)
Translates to: GSVNMVAGQVTTHSRTIGSDFAD*TDGTTT
Trigger: AGTGGTAGTTCCATCAGTGCAGTCTGCAAAGTCAGA...CCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCACTCACCACCTGCGTGTaGTCCTTGCCTAGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: KCFPSWGNPIPELTRQISLTTCV*SLPRSS
Trigger: TGAGCTTCTAGGCAAGGACCACACGCAGGTGGTGAG...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CCA 90 bp CGTGGAAGAGGCCTTACTCCCAAAGGGGAAGCTGGATGTCAGGTTCTTATCCCATGCAGGTATGGAATCTaGAGGTCCAGATTAGTTCGG +
Preference number: 4 (lower is better)
Translates to: RGRGLTPKGEAGCQVLIPCRYGI*RSRLVR
Trigger: CCGAACTAATCTGGACCTCCAGATTCCATACCTGCA...TGGGATAAGAACCTGACATCCAGCTTCCCCTTTGGGAGTAAGGCCTCTTCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp AAAAGGGAGAGTGGGCCCATGTCCCCTTTCCTTTCAGAATGGGCAGAAGATTCATTGGTAGGCAGAGCCTaGTGGCAGAGGACTATCAGT +
Preference number: 4 (lower is better)
Translates to: KRESGPMSPFLSEWAEDSLVGRA*WQRTIS
Trigger: ACTGATAGTCCTCTGCCACCAGGCTCTGCCTACCAA...TGAATCTTCTGCCCATTCTGAAAGGAAAGGGGACATGGGCCCACTCTCCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTATTAGATGTGGGTTCTaGGGCTCTGTCAACATGGTA +
Preference number: 4 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCIRCGF*GSVNMV
Trigger: TACCATGTTGACAGAGCCCCAGAACCCACATCTAAT...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CCA 90 bp GACTCTGGCAAGGCTAATTCCATGATGTTTCACTCAGCGGCAGTCCCACCAGCCATTAGATGTGGGTTCTaGGGCTCTGTCAACATGGTA +
Preference number: 4 (lower is better)
Translates to: DSGKANSMMFHSAAVPPAIRCGF*GSVNMV
Trigger: TACCATGTTGACAGAGCCCCAGAACCCACATCTAAT...GGCTGGTGGGACTGCCGCTGAGTGAAACATCATGGAATTAGCCTTGCCAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp ATGAGCAGCAGATTGGAAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATAGTGAATCAGCAAGCATaGAAGAAAACCGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: MSSRLEGESPLPPFGRSIVNQQA*KKTGLH
Trigger: GTGCAGACCGGTTTTCTTCCATGCTTGCTGATTCAC...TATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTTCCAATCTGCTGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCTACCAGAGGCACTGCTaGAACAGGATGAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTYQRHC*NRMKTD
Trigger: ATCAGTTTTCATCCTGTTCCAGCAGTGCCTCTGGTA...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CAA 72 bp AATTCAAAAATCTGGTACCACTGGATGAGCAGCAGATaGGAAGGTGAGTCACCACTGCCCCCTTTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: NSKIWYHWMSSR*EGESPLPPFGR
Trigger: CCTGCCGAAAGGGGGCAGTGGTGACTCACCTTCCAATCTGCTGCTCATCCAGTGGTACCAGATTTTTGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp AATCAAAGTGAGACTGGAAGAAGGGAGCCACCTGGATTCCCAAAGATAGGGCTCGCAAGGCTAATTCCATaGTGTTTCACTCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: NQSETGRREPPGFPKIGLARLIP*CFTQRQ
Trigger: CTGCCGCTGAGTGAAACATCATGGAATTAGCCTTGC...GAGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTTCCAGTCTCACTTTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp ATACCTGTGTACTTGAGGACATGCAATGTCATTCATACTGATCCCCCTCCTAGCCCTGCGTGTGGTCCTTaGCTAGAAGCTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: IPVYLRTCNVIHTDPPPSPACGP*LEAHPA
Trigger: AGCTGGATGAGCTTCTAGGCAAGGACCACACGCAGG...GCTAGGAGGGGGATCAGTATGAATGACATTGCATGTCCTCAAGTACACAGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp TGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGTATTAAGGCTCACCACCTaGGTGTGGTCCTTGCCTAGA +
Preference number: 4 (lower is better)
Translates to: CFPSWGNPIPELTRQISVLRLTT*VWSLPR
Trigger: TCTAGGCAAGGACCACACGCAGGTGGTGAGCCTTAA...TACTGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCATTAAGGCTCACCACCTaGGTGTGGTCCTTGCCTAGA +
Preference number: 4 (lower is better)
Translates to: KCFPSWGNPIPELTRQISLRLTT*VWSLPR
Trigger: TCTAGGCAAGGACCACACGCAGGTGGTGAGCCTTAA...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp GAAGATTCACATCAGACATGGTCAAATACTCCCAGACACACACTTAGCCATATTAGGCCACATGACATCTaGGGCCCAGCCCACACTCCC +
Preference number: 4 (lower is better)
Translates to: EDSHQTWSNTPRHTLSHIRPHDI*GPAHTP
Trigger: GGGAGTGTGGGCTGGGCCGCAGATGTCATGTGGCCT...AATATGGCTAAGTGTGTGTCTGGGAGTATTTGACCATGTCTGATGTGAATCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp ATACCTGTGTACTTGAGGACATGCAATGTCATTCATACTGATCCCCCTCCTAGCGGTCTAATCCGAGGCTaGATCTGGAGTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: IPVYLRTCNVIHTDPPPSGLIRG*IWSPVW
Trigger: CCAGACTGGACTCCAGATGCAGCCTCGGATTAGACC...GCTAGGAGGGGGATCAGTATGAATGACATTGCATGTCCTCAAGTACACAGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp ACCATCAGGCCTCACGAGAGAGAACCTAAGAAGCAGGGCCAATACCCACTCCCTTATCCTGCTCTAAAATaGCTGTACTTGCCTAACTCC +
Preference number: 4 (lower is better)
Translates to: TIRPHEREPKKQGQYPLPYPALK*LYLPNS
Trigger: GGAGTTAGGCAAGTACAGGCATTTTAGAGCAGGATA...AGGGAGTGGGTATTGGCCCTGCTTCTTAGGTTCTCTCTCGTGAGGCCTGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp GAAAAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTGTTCCTGGGAATCTGTaGCTCCAGGGTTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: EKCFPSWGNPIPELTRQIVPGNL*LQGSVQ
Trigger: TTGCACTGAACCCTGGAGGCACAGATTCCCAGGAAC...AATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp ATGAGCAGCAGATTGGAAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATACTCCTGACCAGCTTGTaGTTCTTGGTTCTTATGCAA +
Preference number: 4 (lower is better)
Translates to: MSSRLEGESPLPPFGRSILLTSL*FLVLMQ
Trigger: TTGCATAAGAACCAAGAAGCACAAGCTGGTCAGGAG...TATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTTCCAATCTGCTGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp AAGGGGAAGCTGGATGTCAGGTTCTTATCCCAGTGCAGAAGACTAGGTAAAATCAGTGAAGCCAGGAGCTaGGCTGTGCAACTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: KGKLDVRFLSQCRRLGKISEARS*AVQLRG
Trigger: TCCTCTCAGTTGCACAGCCCAGCTCCTGGCTTCACT...GATTTTACCTAGTCTTCTGCACTGGGATAAGAACCTGACATCCAGCTTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp GGACAGCCTCAAGGAACATATGTGCATGCTGACACAAGTCCAGCTGGCCGTCCTATCTGGAGTCCAGTCTaGACAGTAATTCATGTAGTG +
Preference number: 4 (lower is better)
Translates to: GQPQGTYVHADTSPAGRPIWSPV*TVIHVV
Trigger: CACTACATGAATTACTGTCCAGACTGGACTCCAGAT...AGGACGGCCAGCTGGACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp TCTCAGATCCTGTATTCAGGGAGACACAACTGGTACCAGGCCCACCCTCTGCCACCTTTCCTTTCAGAATaGGCAGAAGATTCACATCAG +
Preference number: 4 (lower is better)
Translates to: SQILYSGRHNWYQAHPLPPFLSE*AEDSHQ
Trigger: CTGATGTGAATCTTCTGCCCATTCTGAAAGGAAAGG...TGGCAGAGGGTGGGCCTGGTACCAGTTGTGTCTCCCTGAATACAGGATCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp GCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTGGACAGTAATTTACAAAAAGGGAGAGTaGGCCCATGTCCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: AKLGLIRGCIWSPVWTVIYKKGE*AHVPFP
Trigger: AGGAAAGGGGACATGGGCCCACTCTCCCTTTTTGTA...AATTACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp ATACCTGTGTACTTGAGGACATGCAATGTCATTCATACTGATCCCCCTCCTAGCGGGGTCTCACCATGTTaGCCTGGTCTCAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: IPVYLRTCNVIHTDPPPSGVSPC*PGLKLL
Trigger: CAGGAGTTTGAGACCAGGCCAACATGGTGAGACCCC...GCTAGGAGGGGGATCAGTATGAATGACATTGCATGTCCTCAAGTACACAGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCATTTCTGCCAGCGTGGTaGCTCATTTGTCACCTGACC +
Preference number: 4 (lower is better)
Translates to: KCFPSWGNPIPELTRQISFLPAW*LICHLT
Trigger: GGTCAGGTGACAAATGAGCCACCACGCTGGCAGAAA...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp AATCAAAGTGAGACTGGAAGAAGGGAGCCACCTGGATTCCCAAAGATAGGGCTCAAGAAGGGAGCCACCTaGATTCCCAAAGATAGGGCT +
Preference number: 4 (lower is better)
Translates to: NQSETGRREPPGFPKIGLKKGAT*IPKDRA
Trigger: AGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTT...GAGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTTCCAGTCTCACTTTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp GAGGCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTGGACAGTATGGTCAGTCATATTCTaGGTTCAAGAGTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: EAKLGLIRGCIWSPVWTVWSVIF*VQESFI
Trigger: GATGAAGGACTCTTGAACTCAGAATATGACTGACCA...TACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp AAAAGGGAGAGTGGGCCCATGTCCCCTTTCCTTTCAGAATGGGCAGAAGATTCATCCTGGCATGATCACTaGCTGACACATGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: KRESGPMSPFLSEWAEDSSWHDH*LTHVLR
Trigger: TCTGAGTACATGTGTCAGTCAGTGATCATGCCAGGA...TGAATCTTCTGCCCATTCTGAAAGGAAAGGGGACATGGGCCCACTCTCCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp ATACCTGTGTACTTGAGGACATGCAATGTCATTCATACTGATCCCCCTCCTAGCAACATATGTGCATGCTaGCACAAGTCCAGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: IPVYLRTCNVIHTDPPPSNICAC*HKSSWP
Trigger: CGGCCAGCTGGACTTGTGTCAGCATGCACATATGTT...GCTAGGAGGGGGATCAGTATGAATGACATTGCATGTCCTCAAGTACACAGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp TGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGTAGGGATGGTTTCGGGATaGAACTGTTCCAGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: CFPSWGNPIPELTRQISVGMVSG*NCSSSD
Trigger: ATCTGAGCTGGAACAGTTTCATCCCGAAACCATCCC...TACTGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR TCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCGGATACCGCAGAACCTaGAGATTTTCTGTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTGYRRT*RFSVKN
Trigger: ATTTTTCACAGAAAATCTTCAGGTTCTGCGGTATCC...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR TCA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGGGGAATCCCATTCCTaGGCTGACAAGACAGATTTC +
Preference number: 4 (lower is better)
Translates to: KCFPSWGNPIPELTRQISGESHS*ADKTDF
Trigger: GAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCC...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR TCA 90 bp GAAAAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTGGGGAATCCCATTCCTaGGCTGACAAGACAGATTTC +
Preference number: 4 (lower is better)
Translates to: EKCFPSWGNPIPELTRQIGESHS*ADKTDF
Trigger: GAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCC...AATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR TCA 90 bp ACCATCAGGCCTCACGAGAGAGAACCTAAGAAGCAGGGCCAATACCCACTCCCTATTTGGTGTTATGCATaGGATCCTCAAAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: TIRPHEREPKKQGQYPLPIWCYA*DPQNCS
Trigger: TGAGCAGTTTTGAGGATCTCATGCATAACACCAAAT...AGGGAGTGGGTATTGGCCCTGCTTCTTAGGTTCTCTCTCGTGAGGCCTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAAGAACCGTGTCTGTCTaGCCCAATTATGCCCTATCC +
Preference number: 4 (lower is better)
Translates to: KCFPSWGNPIPELTRQISRTVSV*PNYALS
Trigger: GGATAGGGCATAATTGGGCCAGACAGACACGGTTCT...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CCA 90 bp TGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGTAGGGGTTGGAGAGGGATaGTTTCGGGATGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: CFPSWGNPIPELTRQISVGVGEG*FRDETV
Trigger: AACAGTTTCATCCCGAAACCATCCCTCTCCAACCCC...TACTGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CCA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTCTCCTAGAGCCCTTTTaGAAAGACATTTGGTGTTAT +
Preference number: 4 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCLLEPF*KDIWCY
Trigger: ATAACACCAAATGTCTTTCCAAAAGGGCTCTAGGAG...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp AAGTCTCAGAATGTTAGGCAGAAAGATCCCAGAAGTTCAGAGGGGCACTCACCTTATAGCAGAAGGGACTaGGGAAAGACAGGTCAGACA +
Preference number: 4 (lower is better)
Translates to: KSQNVRQKDPRSSEGHSPYSRRD*GKTGQT
Trigger: TGTCTGACCTGTCTTTCCTCAGTCCCTTCTGCTATA...AGGTGAGTGCCCCTCTGAACTTCTGGGATCTTTCTGCCTAACATTCTGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp GAGGCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTGGACAGTATTGTTCGTTTGTTTTTaGGACCAAGTGTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: EAKLGLIRGCIWSPVWTVLFVCF*DQVSLC
Trigger: ACAGAGTGACACTTGGTCTCAAAAACAAACGAACAA...TACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCCAACACTACTATCTCTaGTCTAAAGTGAACAATCGA +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTQHYYL*SKVNNR
Trigger: TCGATTGTTCACTTTAGATCAGAGATAGTAGTGTTG...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR TCA 90 bp TGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGTAACAGCTACCATTTATTaGGCACTTACATGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: CFPSWGNPIPELTRQISVTATIY*ALTCQA
Trigger: GGCCTGGCATGTAAGTGCTCAATAAATGGTAGCTGT...TACTGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR TCA 90 bp AAAATAGTGAAGGGAGCCAGGTGCATATTTGAATTCTTTCCAGTGCAGACTGGAGGCCTCAGGGCCTCCTaGATTGAAGTAGGGCAATAC +
Preference number: 4 (lower is better)
Translates to: KIVKGARCIFEFFPVQTGGLRAS*IEVGQY
Trigger: GTATTGCCCTACTTCAATTCAGGAGGCCCTGAGGCC...TCCAGTCTGCACTGGAAAGAATTCAAATATGCACCTGGCTCCCTTCACTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR TCA 90 bp TGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGTAAAAACACAGGCCACATaGCATTCTGGATACCGCAGA +
Preference number: 4 (lower is better)
Translates to: CFPSWGNPIPELTRQISVKTQAT*HSGYRR
Trigger: TCTGCGGTATCCAGAATGTCATGTGGCCTGTGTTTT...TACTGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR TCA 90 bp AAGAAGGGAGCCACCTGGATTCCCAAAGATAGGGCTCTCTCGACCAGACACCAACAGTATCTAAACGAGTaGCCAACCAGAAACAATTCA +
Preference number: 4 (lower is better)
Translates to: KKGATWIPKDRALSTRHQQYLNE*PTRNNS
Trigger: TGAATTGTTTCTGGTTGGTCACTCGTTTAGATACTG...TTGGTGTCTGGTCGAGAGAGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp AAAATAGTGAAGGGAGCCAGGTGCATATTTGAATTCTTTCCAGTGCAGACTGGACCACCACACAACAGATaGGGCCTTCCTCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: KIVKGARCIFEFFPVQTGPPHNR*GLPLHW
Trigger: CCAGTGAAGAGGAAGGCCGCATCTGTTGTGTGGTGG...TCCAGTCTGCACTGGAAAGAATTCAAATATGCACCTGGCTCCCTTCACTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp TGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGTAGTGGGAAGAACACACTaGAGAGGTATACGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: CFPSWGNPIPELTRQISVVGRTH*RGIRFL
Trigger: CAGAAACCGTATACCTCTGCAGTGTGTTCTTCCCAC...TACTGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR GCA 90 bp AATCAAAGTGAGACTGGAAGAAGGGAGCCACCTGGATTCCCAAAGATAGGGCTCAAAAAGAGGGTCACATaGCTCCAAGGTGAATCAGCA +
Preference number: 4 (lower is better)
Translates to: NQSETGRREPPGFPKIGLKKRVT*LQGESA
Trigger: TGCTGATTCACCTTGGAGGCATGTGACCCTCTTTTT...GAGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTTCCAGTCTCACTTTGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp AAAAGGGAGAGTGGGCCCATGTCCCCTTTCCTTTCAGAATGGGCAGAAGATTCATGCCAGGAAAACAACTaGAAGACTCAATCTCCACCT +
Preference number: 4 (lower is better)
Translates to: KRESGPMSPFLSEWAEDSCQENN*KTQSPP
Trigger: AGGTGGAGATTGAGTCTTCCAGTTGTTTTCCTGGCA...TGAATCTTCTGCCCATTCTGAAAGGAAAGGGGACATGGGCCCACTCTCCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp CCCAGCTGTAAGGGTCTTGGTCAGTCATATTCTGAGTTCAAGAGTCCTTCATCTTCCCAAAGGGGAAGCTaGATGTCAGGTTCTTATCCC +
Preference number: 4 (lower is better)
Translates to: PSCKGLGQSYSEFKSPSSSQRGS*MSGSYP
Trigger: GGGATAAGAACCTGACATCCAGCTTCCCCTTTGGGA...AGATGAAGGACTCTTGAACTCAGAATATGACTGACCAAGACCCTTACAGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp GAAGATTCACATCAGACATGGTCAAATACTCCCAGACACACACTTAGCCATATTACCAGGAGCAGCCCGTaGAAGAGGCCTTACTCCCAA +
Preference number: 4 (lower is better)
Translates to: EDSHQTWSNTPRHTLSHITRSSP*KRPYSQ
Trigger: TTGGGAGTAAGGCCTCTTCCACGGGCTGCTCCTGGT...AATATGGCTAAGTGTGTGTCTGGGAGTATTTGACCATGTCTGATGTGAATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTAAAAATTCAAAAATCTaGTACCACTGGATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCKNSKI*YHWMSS
Trigger: GCTGCTCATCCAGTGGTACCAGATTTTTGAATTTTT...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCTTTTATTATTCAGACTaGCTGCCATCCCAACTAGAT +
Preference number: 4 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTFYYSD*LPSQLD
Trigger: ATCTAGTTGGGATGGCAGCCAGTCTGAATAATAAAA...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp AAGGGGAAGCTGGATGTCAGGTTCTTATCCCAGTGCAGAAGACTAGGTAAAATCGGCATGATCACTGACTaGCACATGTACTCAGACACA +
Preference number: 4 (lower is better)
Translates to: KGKLDVRFLSQCRRLGKIGMITD*HMYSDT
Trigger: TGTGTCTGAGTACATGTGTCAGTCAGTGATCATGCC...GATTTTACCTAGTCTTCTGCACTGGGATAAGAACCTGACATCCAGCTTCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp GAAAAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTAGCCAGGTGCATATTTaGATTCTTTCCAGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: EKCFPSWGNPIPELTRQISQVHI*ILSSAD
Trigger: GTCTGCACTGGAAAGAATTCAAATATGCACCTGGCT...AATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR TCA 90 bp TGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGTAGGGGGTAGAAGATGGTaGCTGTTTTCAAGCAAATTC +
Preference number: 4 (lower is better)
Translates to: CFPSWGNPIPELTRQISVGGRRW*LFSSKF
Trigger: GAATTTGCTTGAAAACAGTCACCATCTTCTACCCCC...TACTGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000446026.1
ENST00000521580.3
CDS-3UTR GCA 90 bp GAAGATTCACATCAGACATGGTCAAATACTCCCAGACACACACTTAGCCATATTCTCATTCCAGCCACCTaGGTGTGGTCCTTGCCTAGA +
Preference number: 4 (lower is better)
Translates to: EDSHQTWSNTPRHTLSHILIPAT*VWSLPR
Trigger: TCTAGGCAAGGACCACACGCAGGTGGCTGGAATGAG...AATATGGCTAAGTGTGTGTCTGGGAGTATTTGACCATGTCTGATGTGAATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp AAAATAGTGAAGGGAGCCAGGTGCATATTTGAATTCTTTCCAGTGCAGACTGGACTCTCCTCCCAGCAGTaGACCAGTAAACTCAGATGC +
Preference number: 4 (lower is better)
Translates to: KIVKGARCIFEFFPVQTGLSSQQ*TSKLRC
Trigger: GCATCTGAGTTTACTGGTGCACTGCTGGGAGGAGAG...TCCAGTCTGCACTGGAAAGAATTCAAATATGCACCTGGCTCCCTTCACTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR GCA 90 bp GACTCTGGCAAGGCTAATTCCATGATGTTTCACTCAGCGGCAGTCCCACCAGCCATACCAATGTTATCCTaGTCTAAAATGCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: DSGKANSMMFHSAAVPPAIPMLS*SKMPVL
Trigger: AAGTACAGGCATTTTAGAGCAGGATAACATTGGTAT...GGCTGGTGGGACTGCCGCTGAGTGAAACATCATGGAATTAGCCTTGCCAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp TCTAAACGAGTGACCAACCAGAAACAATTCAAATGTCCAGCAATATGGAAATTGCCAAGATCACGCCACTaGACTCCAGCCCGGGTGACA +
Preference number: 4 (lower is better)
Translates to: SKRVTNQKQFKCPAIWKLPRSRH*TPARVT
Trigger: TGTCACCCGGGCTGGAGTGCAGTGGCGTGATCTTGG...CAATTTCCATATTGCTGGACATTTGAATTGTTTCTGGTTGGTCACTCGTTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp ACAGCAGCTCATTTCCGCATTCCCACTAGGCCTCAGGGAGCCTTAGAAGAAGCCCATGGGAAATGTGTTTaGTATTATTTCTGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: TAAHFRIPTRPQGALEEAHGKCV*YYFCRL
Trigger: AAGCCTACAGAAATAATAGCAAACACATTTCCCATG...GGCTTCTTCTAAGGCTCCCTGAGGCCTAGTGGGAATGCGGAAATGAGCTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp TCATGTGTTTCAGTGAACTGTGACTGGAAGGCCAGTCAAAAAGAGGGTCACATGCTTTTACATTTTCACTaGCTGGCTCCCAACCCAGAC +
Preference number: 4 (lower is better)
Translates to: SCVSVNCDWKASQKEGHMLLHFH*LAPNPD
Trigger: GTCTGGGTTGGGAGCCAGGCAGTGAAAATGTAAAAG...CATGTGACCCTCTTTTTGACTGGCCTTCCAGTCACAGTTCACTGAAACACATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp AAAATAGTGAAGGGAGCCAGGTGCATATTTGAATTCTTTCCAGTGCAGACTGGACTCTCCCCCAAAAGGTaGCAGGAGCATAACAGATGC +
Preference number: 4 (lower is better)
Translates to: KIVKGARCIFEFFPVQTGLSPKR*QEHNRC
Trigger: GCATCTGTTATGCTCCTGCCACCTTTTGGGGGAGAG...TCCAGTCTGCACTGGAAAGAATTCAAATATGCACCTGGCTCCCTTCACTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CCA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCACAGGGACCAGTTTCGTaGAAGACAATTTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: KCFPSWGNPIPELTRQISQGPVS*KTIFPQ
Trigger: CTGTGGAAAAATTGTCTTCCACGAAACTGGTCCCTG...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CCA 90 bp GGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGAAATGTCCAGCAATATaGAAATTGTCCAGGATAAAC +
Preference number: 4 (lower is better)
Translates to: GSVNMVAGQVTTHSRTIGKCPAI*KLSRIN
Trigger: GTTTATCCTGGACAATTTCCATATTGCTGGACATTT...CCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCATCAGTGAACTGTGACTaGAAGGCCAGTCAAAAAGAG +
Preference number: 4 (lower is better)
Translates to: KCFPSWGNPIPELTRQISSVNCD*KASQKE
Trigger: CTCTTTTTGACTGGCCTTCCAGTCACAGTTCACTGA...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp TGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGTACCTTTTCCCAAACTCTaGGATTGTACTCAGGGATTT +
Preference number: 4 (lower is better)
Translates to: CFPSWGNPIPELTRQISVPFPKL*DCTQGF
Trigger: AAATCCCTGAGTACAATCTCAGAGTTTGGGAAAAGG...TACTGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR TCA 90 bp GAAAAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTGCTGCTAACATTTACTaGGTACCTACTGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: EKCFPSWGNPIPELTRQIAANIY*VPTGCC
Trigger: ACAACAACCAGTAGGTACTCAGTAAATGTTAGCAGC...AATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp CCCAGCTGTAAGGGTCTTGGTCAGTCATATTCTGAGTTCAAGAGTCCTTCATCTTATTGTTCCCGCTGTTaGCAGGAAAACAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: PSCKGLGQSYSEFKSPSSYCSRC*QENNWK
Trigger: CTTCCAGTTGTTTTCCTGGCAACAGCGGGAACAATA...AGATGAAGGACTCTTGAACTCAGAATATGACTGACCAAGACCCTTACAGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp GAAAAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTCAACTATCTCTCACATaGAGCATAAAGTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: EKCFPSWGNPIPELTRQIQLSLT*SIKSLA
Trigger: AGCGAGAGACTTTATGCTGCATGTGAGAGATAGTTG...AATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR GCA 90 bp GAAAAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAAATGCTCACTACTaGCCTGTGCTGACTTTAGTT +
Preference number: 4 (lower is better)
Translates to: EKCFPSWGNPIPELTRQISNAHY*PVLTLV
Trigger: AACTAAAGTCAGCACAGGGCAGTAGTGAGCATTTGA...AATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp TGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGTACTTAGGTTATTAAGCTaGCTTTGTACAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: CFPSWGNPIPELTRQISVLRLLS*LCTGCP
Trigger: TGGGCATCCTGTACAAAGGCAGCTTAATAACCTAAG...TACTGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp AAGAAGGGAGCCACCTGGATTCCCAAAGATAGGGCTCTCTCGACCAGACACCAAAACATAGGTTCTTCCTaGAATACAATTAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KKGATWIPKDRALSTRHQNIGSS*NTIKAA
Trigger: AGCAGCTTTAATTGTATTGCAGGAAGAACCTATGTT...TTGGTGTCTGGTCGAGAGAGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp GAAGGCCAGTCAAAAAGAGGGTCACATGCCTCCAAGGTGAATCAGCAAGCATGGGATACACACAACTATTaGAGGAAACATAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: EGQSKRGSHASKVNQQAWDTHNY*RKHRFF
Trigger: GAAGAACCTATGTTTCCTGCAATAGTTGTGTGTATC...CCATGCTTGCTGATTCACCTTGGAGGCATGTGACCCTCTTTTTGACTGGCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp ATACCTGTGTACTTGAGGACATGCAATGTCATTCATACTGATCCCCCTCCTAGCTGTGTCTTGCAGGTATaGAATCTGGAGGTCCAGATT +
Preference number: 4 (lower is better)
Translates to: IPVYLRTCNVIHTDPPPSCVLQV*NLEVQI
Trigger: AATCTGGACCTCCAGATTCCATACCTGCAAGACACA...GCTAGGAGGGGGATCAGTATGAATGACATTGCATGTCCTCAAGTACACAGGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCACCCCCAAATACCACCTaGATGATAAGATTCGATCAT +
Preference number: 4 (lower is better)
Translates to: KCFPSWGNPIPELTRQISPPNTT*MIRFDH
Trigger: ATGATCGAATCTTATCATCCAGGTGGTATTTGGGGG...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp TGCTGGAACAGGATGAAAACTGATACACCGGTTACTAATTACTCTTCACTCTTCTTCAGAAGGGCTAAGTaGCTTGCCCAAGGTCATCCA +
Preference number: 4 (lower is better)
Translates to: CWNRMKTDTPVTNYSSLFFRRAK*LAQGHP
Trigger: TGGATGACCTTGGGCAAGTCACTTAGCCCTTCTGAA...GAAGAGTGAAGAGTAATTAGTAACCGGTGTATCAGTTTTCATCCTGTTCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp GCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTGGACAGTAATTGTGTACTTGAGGACATaGAATGTCATTCATACTGAT +
Preference number: 4 (lower is better)
Translates to: AKLGLIRGCIWSPVWTVIVYLRT*NVIHTD
Trigger: ATCAGTATGAATGACATTGCATGTCCTCAAGTACAC...AATTACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp TGCTGGAACAGGATGAAAACTGATACACCGGTTACTAATTACTCTTCACTCTTCACCAGTAAACTCAGATaGCTGAGTGCTTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: CWNRMKTDTPVTNYSSLFTSKLR*LSACGH
Trigger: GTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGT...GAAGAGTGAAGAGTAATTAGTAACCGGTGTATCAGTTTTCATCCTGTTCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CCA 90 bp GAAGATTCACATCAGACATGGTCAAATACTCCCAGACACACACTTAGCCATATTAACACGCTTCAGAACTaGGCTGAGAACTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: EDSHQTWSNTPRHTLSHINTLQN*AENSVH
Trigger: GTGCACTGAGTTCTCAGCCCAGTTCTGAAGCGTGTT...AATATGGCTAAGTGTGTGTCTGGGAGTATTTGACCATGTCTGATGTGAATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp AAGGGGAAGCTGGATGTCAGGTTCTTATCCCAGTGCAGAAGACTAGGTAAAATCGATTCACATCAGACATaGTCAAATACTCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: KGKLDVRFLSQCRRLGKIDSHQT*SNTPRH
Trigger: GTGTCTGGGAGTATTTGACCATGTCTGATGTGAATC...GATTTTACCTAGTCTTCTGCACTGGGATAAGAACCTGACATCCAGCTTCCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CCA 90 bp AAAATAGTGAAGGGAGCCAGGTGCATATTTGAATTCTTTCCAGTGCAGACTGGATTACATGCCAGGCCTTaGGCTAGGTGCTTCATATAC +
Preference number: 4 (lower is better)
Translates to: KIVKGARCIFEFFPVQTGLHARP*ARCFIY
Trigger: GTATATGAAGCACCTAGCCCAAGGCCTGGCATGTAA...TCCAGTCTGCACTGGAAAGAATTCAAATATGCACCTGGCTCCCTTCACTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CCA 90 bp TCATGTGTTTCAGTGAACTGTGACTGGAAGGCCAGTCAAAAAGAGGGTCACATGAACGAGCTGGGAACATaGGTGACCTTTTTAAAATCC +
Preference number: 4 (lower is better)
Translates to: SCVSVNCDWKASQKEGHMNELGT*VTFLKS
Trigger: GGATTTTAAAAAGGTCACCCATGTTCCCAGCTCGTT...CATGTGACCCTCTTTTTGACTGGCCTTCCAGTCACAGTTCACTGAAACACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp AAAATAGTGAAGGGAGCCAGGTGCATATTTGAATTCTTTCCAGTGCAGACTGGATGTTTCAGTGAACTGTaGCTGGAAGGCCAGTCAAAA +
Preference number: 4 (lower is better)
Translates to: KIVKGARCIFEFFPVQTGCFSEL*LEGQSK
Trigger: TTTTGACTGGCCTTCCAGTCACAGTTCACTGAAACA...TCCAGTCTGCACTGGAAAGAATTCAAATATGCACCTGGCTCCCTTCACTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp CCCAGCTGTAAGGGTCTTGGTCAGTCATATTCTGAGTTCAAGAGTCCTTCATCTAGGTTCTTATCCCAGTaGAGAAGACTAGGTAAAATC +
Preference number: 4 (lower is better)
Translates to: PSCKGLGQSYSEFKSPSSRFLSQ*RRLGKI
Trigger: GATTTTACCTAGTCTTCTGCACTGGGATAAGAACCT...AGATGAAGGACTCTTGAACTCAGAATATGACTGACCAAGACCCTTACAGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp GAAGATTCACATCAGACATGGTCAAATACTCCCAGACACACACTTAGCCATATTCACCATTTCTCCTTCTaGCCCAGCACTGAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: EDSHQTWSNTPRHTLSHIHHFSF*PSTEKN
Trigger: ATTCTTTTCAGTGCTGGGGCAGAAGGAGAAATGGTG...AATATGGCTAAGTGTGTGTCTGGGAGTATTTGACCATGTCTGATGTGAATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR GCA 90 bp TCATGTGTTTCAGTGAACTGTGACTGGAAGGCCAGTCAAAAAGAGGGTCACATGAATTCAGTGACAAAGTaGCCTTGGAAAGGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: SCVSVNCDWKASQKEGHMNSVTK*PWKGKK
Trigger: TTTCTTTCCTTTCCAAGGGCACTTTGTCACTGAATT...CATGTGACCCTCTTTTTGACTGGCCTTCCAGTCACAGTTCACTGAAACACATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR TCA 90 bp GAAGATTCACATCAGACATGGTCAAATACTCCCAGACACACACTTAGCCATATTACATACCTGTGTACTTaGGGACATGCAATGTCATTC +
Preference number: 4 (lower is better)
Translates to: EDSHQTWSNTPRHTLSHITYLCT*GHAMSF
Trigger: GAATGACATTGCATGTCCTCAAGTACACAGGTATGT...AATATGGCTAAGTGTGTGTCTGGGAGTATTTGACCATGTCTGATGTGAATCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR TCA 90 bp AAAATAGTGAAGGGAGCCAGGTGCATATTTGAATTCTTTCCAGTGCAGACTGGACCTGAAGATTTTCTGTaGAAAATCACTGTACAAGCC +
Preference number: 4 (lower is better)
Translates to: KIVKGARCIFEFFPVQTGPEDFL*KITVQA
Trigger: GGCTTGTACAGTGATTTTTCACAGAAAATCTTCAGG...TCCAGTCTGCACTGGAAAGAATTCAAATATGCACCTGGCTCCCTTCACTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR GCA 90 bp TCTAAACGAGTGACCAACCAGAAACAATTCAAATGTCCAGCAATATGGAAATTGGGCAACAGCTTCTTATaGTTCTTCCTGCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SKRVTNQKQFKCPAIWKLGNSFL*FFLLSA
Trigger: AGCAGAGAGCAGGAAGAAGCATAAGAAGCTGTTGCC...CAATTTCCATATTGCTGGACATTTGAATTGTTTCTGGTTGGTCACTCGTTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR GCA 90 bp CCTAAGAAGACCCCCAAATACCACCTGGATGATAAGATTCGATCATTATGGTTCAGACATTTGGTGTTATaGATGAGATCCTCAAAACTG +
Preference number: 4 (lower is better)
Translates to: PKKTPKYHLDDKIRSLWFRHLVL*MRSSKL
Trigger: CAGTTTTGAGGATCTCATGCATAACACCAAATGTCT...GAACCATAATGATCGAATCTTATCATCCAGGTGGTATTTGGGGGTCTTCTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CAA 72 bp TATGTGTGTGTATGTGAGGTCTACCTCCATTTAGACTaGAAGGTGCTGCAGCCAATTGTAATAATGGTAAAA +
Preference number: 4 (lower is better)
Translates to: YVCVCEVYLHLD*KVLQPIVIMVK
Trigger: TTTTACCATTATTACAATTGGCTGCAGCACCTTCAAGTCTAAATGGAGGTAGACCTCACATACACACACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
3UTR CAA 72 bp TTAGTAGAAACTCCTAGAGCCCTTTTGGAAAGACATTaGGTGTTATGCATGAGATCCTCAAAACTGCTCATT +
Preference number: 4 (lower is better)
Translates to: LVETPRALLERH*VLCMRSSKLLI
Trigger: AATGAGCAGTTTTGAGGATCTCATGCATAACACCAAATGTCTTTCCAAAAGGGCTCTAGGAGTTTCTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS GCA 90 bp AACACAGGCCACATGACATCTGCTCGCCGGGACCGCGCGCTCACCTaGGGCCCAGCCCACACTCCCCAGTGCGGCCCCCGCTCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: NTGHMTSARRDRALT*GPAHTPQCGPRSPP
Trigger: GGGCGGAGAGCGGGGGCCGCACTGGGGAGTGTGGGCTGGGCCGCAGGTGAGCGCGCGGTCCCGGCGAGCAGATGTCATGTGGCCTGTGTT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456842.1
CDS TCA 90 bp CCTAGCGATCACTCCTCCCGTAACTCAGAGGTTACTGGCCTGGGCTaGCCCGACCTGCTCGCCGGGACCGCGCGCTCACCTGCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PSDHSSRNSEVTGLG*PDLLAGTARSPAAQ
Trigger: CTGGGCCGCAGGTGAGCGCGCGGTCCCGGCGAGCAGGTCGGGTCAGCCCAGGCCAGTAACCTCTGAGTTACGGGAGGAGTGATCGCTAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS CCA 90 bp TGGACCCTAGCGATCACTCCTCCCGTAACTCAGAGGTTACTGGCCTaGGCTGACCCGACCTGCTCGCCGGGACCGCGCGCTCACCTGCGG +
Preference number: 5 (lower is better)
Translates to: WTLAITPPVTQRLLA*ADPTCSPGPRAHLR
Trigger: CCGCAGGTGAGCGCGCGGTCCCGGCGAGCAGGTCGGGTCAGCCCAGGCCAGTAACCTCTGAGTTACGGGAGGAGTGATCGCTAGGGTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS CCA 90 bp TGGGCTCCCAGACTTGGCACCAGAACACCCGCCAGAGAGGGGAGCTaGCAGATCTGGCCGGGACCGGGGTGGACCCTAGCGATCACTCCT +
Preference number: 5 (lower is better)
Translates to: WAPRLGTRTPAREGS*QIWPGPGWTLAITP
Trigger: AGGAGTGATCGCTAGGGTCCACCCCGGTCCCGGCCAGATCTGCCAGCTCCCCTCTCTGGCGGGTGTTCTGGTGCCAAGTCTGGGAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS CCA 90 bp TGCCGAGAAGCCCTGTCTGCGGAGGGCTACCTGGGCTCCCAGACTTaGCACCAGAACACCCGCCAGAGAGGGGAGCTGGCAGATCTGGCC +
Preference number: 5 (lower is better)
Translates to: CREALSAEGYLGSQT*HQNTRQRGELADLA
Trigger: GGCCAGATCTGCCAGCTCCCCTCTCTGGCGGGTGTTCTGGTGCCAAGTCTGGGAGCCCAGGTAGCCCTCCGCAGACAGGGCTTCTCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS CCA 90 bp ACACCCGCCAGAGAGGGGAGCTGGCAGATCTGGCCGGGACCGGGGTaGACCCTAGCGATCACTCCTCCCGTAACTCAGAGGTTACTGGCC +
Preference number: 5 (lower is better)
Translates to: TPAREGSWQIWPGPG*TLAITPPVTQRLLA
Trigger: GGCCAGTAACCTCTGAGTTACGGGAGGAGTGATCGCTAGGGTCCACCCCGGTCCCGGCCAGATCTGCCAGCTCCCCTCTCTGGCGGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS CCA 90 bp AGACTTGGCACCAGAACACCCGCCAGAGAGGGGAGCTGGCAGATCTaGCCGGGACCGGGGTGGACCCTAGCGATCACTCCTCCCGTAACT +
Preference number: 5 (lower is better)
Translates to: RLGTRTPAREGSWQI*PGPGWTLAITPPVT
Trigger: AGTTACGGGAGGAGTGATCGCTAGGGTCCACCCCGGTCCCGGCCAGATCTGCCAGCTCCCCTCTCTGGCGGGTGTTCTGGTGCCAAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS GCA 90 bp GCCTCATCAACGTCCGTCCTCATTGAGGTGCCGAGAAGCCCTGTCTaGGGAGGGCTACCTGGGCTCCCAGACTTGGCACCAGAACACCCG +
Preference number: 5 (lower is better)
Translates to: ASSTSVLIEVPRSPV*GGLPGLPDLAPEHP
Trigger: CGGGTGTTCTGGTGCCAAGTCTGGGAGCCCAGGTAGCCCTCCGCAGACAGGGCTTCTCGGCACCTCAATGAGGACGGACGTTGATGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS GCA 90 bp TGCTGGAGCCTCACAGCCTCATTCCAGCCACCTGCGTGTGGTCCTTaGCTAGAAGCTCATCCAGCTTGCGATCCTCCCGGCGCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: CWSLTASFQPPACGP*LEAHPACDPPGALR
Trigger: TCTCAGAGCGCCGGGAGGATCGCAAGCTGGATGAGCTTCTAGGCAAGGACCACACGCAGGTGGCTGGAATGAGGCTGTGAGGCTCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CAA 90 bp TCCTCCCAGCAGTGCACCAGTAAACTCAGATGCCTGAGTGCTTGTGGCCACCACCCTGGGCTCCCAGACTaGGCACCAGAACACCCGCCA +
Preference number: 5 (lower is better)
Translates to: SSQQCTSKLRCLSACGHHPGLPD*APEHPP
Trigger: TGGCGGGTGTTCTGGTGCCAAGTCTGGGAGCCCAGG...GTGGTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGTGCACTGCTGGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS-3UTR CAA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTGGCTCCCTGGCAGGCTaGTTCTGGCAGCTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCGSLAG*FWQLPS
Trigger: GCTGGGCAGCTGCCAGAACAAGCCTGCCAGGGAGCC...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS GCA 90 bp GGCACAAAACGGCTGCTGGAGCCTCACAGCCTCATTCCAGCCACCTaGGTGTGGTCCTTGCCTAGAAGCTCATCCAGCTTGCGATCCTCC +
Preference number: 5 (lower is better)
Translates to: GTKRLLEPHSLIPAT*VWSLPRSSSSLRSS
Trigger: GGAGGATCGCAAGCTGGATGAGCTTCTAGGCAAGGACCACACGCAGGTGGCTGGAATGAGGCTGTGAGGCTCCAGCAGCCGTTTTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS GCA 90 bp CAGGCGGTAATGCTTGCCAGCTTGCCCACCGCTCACCTCCTGCTGTaGAGCCCAGTTTCTAATGGGCTGAAGACCACCACTGGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: QAVMLASLPTAHLLL*SPVSNGLKTTTGLW
Trigger: CCACAGACCAGTGGTGGTCTTCAGCCCATTAGAAACTGGGCTGCACAGCAGGAGGTGAGCGGTGGGCAAGCTGGCAAGCATTACCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS CCA 90 bp ATCAGGAACCCAGGTTTCTACTGCCTCGTGGCACAAAACGGCTGCTaGAGCCTCACAGCCTCATTCCAGCCACCTGCGTGTGGTCCTTGC +
Preference number: 5 (lower is better)
Translates to: IRNPGFYCLVAQNGC*SLTASFQPPACGPC
Trigger: GCAAGGACCACACGCAGGTGGCTGGAATGAGGCTGTGAGGCTCCAGCAGCCGTTTTGTGCCACGAGGCAGTAGAAACCTGGGTTCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CAA 90 bp ACGCCCAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATACCTGCGTGTGGTCCTaGCCTAGAAGCTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: TPKSQPFPLEAKPPAHRDTCVWS*PRSSSS
Trigger: GCTGGATGAGCTTCTAGGCAAGGACCACACGCAGGT...ATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTGGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS GCA 90 bp ATGACATCTCATTCATGGCCTCATCAACGTCCGTCCTCATTGAGGTaGCGAGAAGCCCTGTCTGCGGAGGGCTACCTGGGCTCCCAGACT +
Preference number: 5 (lower is better)
Translates to: MTSHSWPHQRPSSLR*REALSAEGYLGSQT
Trigger: AGTCTGGGAGCCCAGGTAGCCCTCCGCAGACAGGGCTTCTCGGCACCTCAATGAGGACGGACGTTGATGAGGCCATGAATGAGATGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS-3UTR CAA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTAGAAGCTCATCCAGCTaGCGATCCTCCCGGCGCTCT +
Preference number: 5 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCRSSSS*RSSRRS
Trigger: AGAGCGCCGGGAGGATCGCAAGCTGGATGAGCTTCT...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CAA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTAGAAGCTCATCCAGCTaGCGATCCTCCCGGCGCTCT +
Preference number: 5 (lower is better)
Translates to: AIPTRGQTACPQRLTANVRSSSS*RSSRRS
Trigger: AGAGCGCCGGGAGGATCGCAAGCTGGATGAGCTTCT...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CAA 90 bp ATGTGGGTTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGAGAAGCTCATCCAGCTaGCGATCCTCCCGGCGCTCT +
Preference number: 5 (lower is better)
Translates to: MWVLGLCQHGSRTSHHPQRSSSS*RSSRRS
Trigger: AGAGCGCCGGGAGGATCGCAAGCTGGATGAGCTTCT...CTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAACCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CAA 90 bp TCCTCCCAGCAGTGCACCAGTAAACTCAGATGCCTGAGTGCTTGTGGCCACCACACCTGCGTGTGGTCCTaGCCTAGAAGCTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: SSQQCTSKLRCLSACGHHTCVWS*PRSSSS
Trigger: GCTGGATGAGCTTCTAGGCAAGGACCACACGCAGGT...GTGGTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGTGCACTGCTGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CAA 90 bp ATGTGGGTTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGCAACGTCCGTCCTCATaGAGGTGCCGAGAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: MWVLGLCQHGSRTSHHPQQRPSS*RCREAL
Trigger: CAGGGCTTCTCGGCACCTCAATGAGGACGGACGTTG...CTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAACCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS-3UTR CAA 90 bp ACAGCAGCTCATTTCCGCATTCCCACTAGGCCTCAGGGAGCCTTAGAAGAAGCCAAGCCACCACCATCATaGGGCTGGGAAGAGACGGGG +
Preference number: 5 (lower is better)
Translates to: TAAHFRIPTRPQGALEEAKPPPS*GWEETG
Trigger: CCCCGTCTCTTCCCAGCCCAATGATGGTGGTGGCTT...GGCTTCTTCTAAGGCTCCCTGAGGCCTAGTGGGAATGCGGAAATGAGCTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp GGACAGCCTCAAGGAACATATGTGCATGCTGACACAAGTCCAGCTGGCCGTCCTACCTGCGTGTGGTCCTaGCCTAGAAGCTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: GQPQGTYVHADTSPAGRPTCVWS*PRSSSS
Trigger: GCTGGATGAGCTTCTAGGCAAGGACCACACGCAGGT...AGGACGGCCAGCTGGACTTGTGTCAGCATGCACATATGTTCCTTGAGGCTGTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CAA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTACCTGCGTGTGGTCCTaGCCTAGAAGCTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: AIPTRGQTACPQRLTANVTCVWS*PRSSSS
Trigger: GCTGGATGAGCTTCTAGGCAAGGACCACACGCAGGT...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CAA 90 bp CAAATCCCAGCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACACCCAGGAGGCAGAAGTaGCAGTCAGCCAAGATCACG +
Preference number: 5 (lower is better)
Translates to: QIPAIPTRGQTACPQRLTPRRQK*QSAKIT
Trigger: CGTGATCTTGGCTGACTGCAACTTCTGCCTCCTGGG...TGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGCTGGGATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp ACAGCAGCTCATTTCCGCATTCCCACTAGGCCTCAGGGAGCCTTAGAAGAAGCCGAAGTGACTGCAGGCTaGGTAATGCCCAGGACTGCC +
Preference number: 5 (lower is better)
Translates to: TAAHFRIPTRPQGALEEAEVTAG*VMPRTA
Trigger: GGCAGTCCTGGGCATTACCAAGCCTGCAGTCACTTC...GGCTTCTTCTAAGGCTCCCTGAGGCCTAGTGGGAATGCGGAAATGAGCTGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp AAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATACTTTCTGCCAGCGTGGAAACCGGTCTGCACCTaGGTTCATCCCAGCAACCCT +
Preference number: 5 (lower is better)
Translates to: KVSHHCPLSAGLYFLPAWKPVCT*VHPSNP
Trigger: AGGGTTGCTGGGATGAACCAAGGTGCAGACCGGTTT...CCACGCTGGCAGAAAGTATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS CCA 90 bp CTGTGCAGCCCAGTTTCTAATGGGCTGAAGACCACCACTGGTCTGTaGCCCAGGGGGTTAAGGACCCCTGCAATAAGGCAGCATCATGAA +
Preference number: 5 (lower is better)
Translates to: LCSPVSNGLKTTTGL*PRGLRTPAIRQHHE
Trigger: TTCATGATGCTGCCTTATTGCAGGGGTCCTTAACCCCCTGGGCCACAGACCAGTGGTGGTCTTCAGCCCATTAGAAACTGGGCTGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CAA 90 bp TCTCAGATCCTGTATTCAGGGAGACACAACTGGTACCAGGCCCACCCTCTGCCATGGGGTCTCACCATGTaGGCCTGGTCTCAAACTCCT +
Preference number: 5 (lower is better)
Translates to: SQILYSGRHNWYQAHPLPWGLTM*AWSQTP
Trigger: AGGAGTTTGAGACCAGGCCAACATGGTGAGACCCCA...TGGCAGAGGGTGGGCCTGGTACCAGTTGTGTCTCCCTGAATACAGGATCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CAA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCCAGATGCCTGAGTGCTaGTGGCCACCACACAACAGA +
Preference number: 5 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTQMPEC*WPPHNR
Trigger: TCTGTTGTGTGGTGGCCACAAGCACTCAGGCATCTG...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CAA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCAGACTCCCCCGCTTATaGTCTCAGCACCAGGCACTA +
Preference number: 5 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTRLPRL*SQHQAL
Trigger: TAGTGCCTGGTGCTGAGACAATAAGCGGGGGAGTCT...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CAA 90 bp AGGAGCAGCCCGTGGAAGAGGCCTTACTCCCAAAGGGGAAGCTGGATGTCAGGTCTATTGTTCCCGCTGTaGCCAGGAAAACAACTGGAA +
Preference number: 5 (lower is better)
Translates to: RSSPWKRPYSQRGSWMSGLLFPL*PGKQLE
Trigger: TTCCAGTTGTTTTCCTGGCAACAGCGGGAACAATAG...ACCTGACATCCAGCTTCCCCTTTGGGAGTAAGGCCTCTTCCACGGGCTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CAA 90 bp CGTGGAAGAGGCCTTACTCCCAAAGGGGAAGCTGGATGTCAGGTTCTTATCCCAGGAGATGAGGCCAAATaGGGTCTAATCCGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: RGRGLTPKGEAGCQVLIPGDEAK*GLIRGC
Trigger: GCAGCCTCGGATTAGACCCAATTTGGCCTCATCTCC...TGGGATAAGAACCTGACATCCAGCTTCCCCTTTGGGAGTAAGGCCTCTTCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CAA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTGCCTGCCCACAGAGATaGACAGCCAATGTTCATCTC +
Preference number: 5 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCACPQR*TANVHL
Trigger: GAGATGAACATTGGCTGTCAATCTCTGTGGGCAGGC...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CAA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTGCCTGCCCACAGAGATaGACAGCCAATGTTCATCTC +
Preference number: 5 (lower is better)
Translates to: AIPTRGQTACPQRLTANVACPQR*TANVHL
Trigger: GAGATGAACATTGGCTGTCAATCTCTGTGGGCAGGC...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423898.1
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CAA 90 bp TTCTGGCAGCTGCCCAGCCGACTTGTGCTAACACAGCAACAGGCACAGGAAAGAGCCTGCCCACAGAGATaGACAGCCAATGTTCATCTC +
Preference number: 5 (lower is better)
Translates to: FWQLPSRLVLTQQQAQERACPQR*TANVHL
Trigger: GAGATGAACATTGGCTGTCAATCTCTGTGGGCAGGC...TCTTTCCTGTGCCTGTTGCTGTGTTAGCACAAGTCGGCTGGGCAGCTGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp AAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATACTTTCTGCCAGCGTGGCAAGTTCCATCCGATTaGTTCCCTGGGAAGCAACAG +
Preference number: 5 (lower is better)
Translates to: KVSHHCPLSAGLYFLPAWQVPSD*FPGKQQ
Trigger: CTGTTGCTTCCCAGGGAACAAATCGGATGGAACTTG...CCACGCTGGCAGAAAGTATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp GACTCTGGCAAGGCTAATTCCATGATGTTTCACTCAGCGGCAGTCCCACCAGCCTGGATGAGCAGCAGATaGGAAGGTGAGTCACCACTG +
Preference number: 5 (lower is better)
Translates to: DSGKANSMMFHSAAVPPAWMSSR*EGESPL
Trigger: CAGTGGTGACTCACCTTCCAATCTGCTGCTCATCCA...GGCTGGTGGGACTGCCGCTGAGTGAAACATCATGGAATTAGCCTTGCCAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp TCCTCCCAGCAGTGCACCAGTAAACTCAGATGCCTGAGTGCTTGTGGCCACCACGAAGGGCTAAGTGACTaGCCCAAGGTCATCCAGTTA +
Preference number: 5 (lower is better)
Translates to: SSQQCTSKLRCLSACGHHEGLSD*PKVIQL
Trigger: TAACTGGATGACCTTGGGCAAGTCACTTAGCCCTTC...GTGGTGGCCACAAGCACTCAGGCATCTGAGTTTACTGGTGCACTGCTGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS GCA 90 bp TTTAAGCTCCAAAAGGCTAAGAACCGTGTCTGTCTGGCCCAATTATaGCCTATCCATCCAGGCACCTCTCCTACCCTGCCTGGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: FKLQKAKNRVCLAQL*PIHPGTSPTLPGRV
Trigger: CACTCTGCCAGGCAGGGTAGGAGAGGTGCCTGGATGGATAGGGCATAATTGGGCCAGACAGACACGGTTCTTAGCCTTTTGGAGCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417239.1
ENST00000446026.1
CDS-3UTR CAA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAAGAAGCTCATCCAGCTaGCGATCCTCCCGGCGCTCT +
Preference number: 5 (lower is better)
Translates to: KCFPSWGNPIPELTRQISRSSSS*RSSRRS
Trigger: AGAGCGCCGGGAGGATCGCAAGCTGGATGAGCTTCT...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CAA 90 bp TTCTGGCAGCTGCCCAGCCGACTTGTGCTAACACAGCAACAGGCACAGGAAAGATGCTTCCCTCTGACTTaGCAGACTGCACTGATGGAA +
Preference number: 5 (lower is better)
Translates to: FWQLPSRLVLTQQQAQERCFPLT*QTALME
Trigger: TTCCATCAGTGCAGTCTGCAAAGTCAGAGGGAAGCA...TCTTTCCTGTGCCTGTTGCTGTGTTAGCACAAGTCGGCTGGGCAGCTGCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp AAGAAGGGAGCCACCTGGATTCCCAAAGATAGGGCTCTCTCGACCAGACACCAAAACACGTTCCCCATTTaGCAGGGAAACCAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: KKGATWIPKDRALSTRHQNTFPI*QGNQGQ
Trigger: CTGGCCTTGGTTTCCCTGCAAAATGGGGAACGTGTT...TTGGTGTCTGGTCGAGAGAGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp GAAAAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTACCTGCGTGTGGTCCTaGCCTAGAAGCTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: EKCFPSWGNPIPELTRQITCVWS*PRSSSS
Trigger: GCTGGATGAGCTTCTAGGCAAGGACCACACGCAGGT...AATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CAA 90 bp AATCAAAGTGAGACTGGAAGAAGGGAGCCACCTGGATTCCCAAAGATAGGGCTCCAGATGCCTGAGTGCTaGTGGCCACCACACAACAGA +
Preference number: 5 (lower is better)
Translates to: NQSETGRREPPGFPKIGLQMPEC*WPPHNR
Trigger: TCTGTTGTGTGGTGGCCACAAGCACTCAGGCATCTG...GAGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTTCCAGTCTCACTTTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp TTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCAGTTTCCAGGGCTCCTaGGCACCCTTTAATACCAAT +
Preference number: 5 (lower is better)
Translates to: FWGSVNMVAGQVTTHSRTSFQGS*APFNTN
Trigger: ATTGGTATTAAAGGGTGCCAAGGAGCCCTGGAAACT...GGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp AAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATACTTTCTGCCAGCGTGGATGCCCAAAAGTGTTTaGAGGGAAACCAATTCTGGG +
Preference number: 5 (lower is better)
Translates to: KVSHHCPLSAGLYFLPAWMPKSV*RETNSG
Trigger: CCCAGAATTGGTTTCCCTCAAAACACTTTTGGGCAT...CCACGCTGGCAGAAAGTATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp GTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGCCCTGTACCAGCTTGTGCTTCTaGGTTCTTATGCAAGCCAGT +
Preference number: 5 (lower is better)
Translates to: VNMVAGQVTTHSRTIGPCTSLCF*VLMQAS
Trigger: ACTGGCTTGCATAAGAACCAAGAAGCACAAGCTGGT...ACAGGGCCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp GAGGCCAAATTGGGTCTAATCCGAGGCTGCATCTGGAGTCCAGTCTGGACAGTACCAGCTGTAAGGGTCTaGGTCAGTCATATTCTGAGT +
Preference number: 5 (lower is better)
Translates to: EAKLGLIRGCIWSPVWTVPAVRV*VSHILS
Trigger: ACTCAGAATATGACTGACCAAGACCCTTACAGCTGG...TACTGTCCAGACTGGACTCCAGATGCAGCCTCGGATTAGACCCAATTTGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CAA 90 bp AGTGGGGAGCAGGTATTCGGTTCTGATGCCCAGAGTGGCTGTCCCCACCATTTCCACATACCTGTGTACTaGAGGACATGCAATGTCATT +
Preference number: 5 (lower is better)
Translates to: SGEQVFGSDAQSGCPHHFHIPVY*RTCNVI
Trigger: AATGACATTGCATGTCCTCAAGTACACAGGTATGTG...GAAATGGTGGGGACAGCCACTCTGGGCATCAGAACCGAATACCTGCTCCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CAA 90 bp TGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGTACAGATGCCTGAGTGCTaGTGGCCACCACACAACAGA +
Preference number: 5 (lower is better)
Translates to: CFPSWGNPIPELTRQISVQMPEC*WPPHNR
Trigger: TCTGTTGTGTGGTGGCCACAAGCACTCAGGCATCTG...TACTGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CAA 90 bp ATGTGGGTTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTCTCCCCCTCTCTCTTaGGTTCCAATTCTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: MWVLGLCQHGSRTSHHPQSPPLS*VPILFE
Trigger: TTCAAAGAGAATTGGAACCAAAGAGAGAGGGGGAGA...CTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAACCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CAA 90 bp ATGTGGGTTCTGGGGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGGAGCCAGGTGCATATTaGAATTCTTTCCAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: MWVLGLCQHGSRTSHHPQEPGAY*NSFQCR
Trigger: TCTGCACTGGAAAGAATTCAAATATGCACCTGGCTC...CTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCCCCAGAACCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CAA 90 bp TTCTGGCAGCTGCCCAGCCGACTTGTGCTAACACAGCAACAGGCACAGGAAAGATTACAGGTGAGGATATaGAGGTTCAGAAGGGCTAAG +
Preference number: 5 (lower is better)
Translates to: FWQLPSRLVLTQQQAQERLQVRI*RFRRAK
Trigger: CTTAGCCCTTCTGAACCTCAATATCCTCACCTGTAA...TCTTTCCTGTGCCTGTTGCTGTGTTAGCACAAGTCGGCTGGGCAGCTGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp ATGAGCAGCAGATTGGAAGGTGAGTCACCACTGCCCCCTTTCGGCAGGTCTATAGAGCCAGGTGCATATTaGAATTCTTTCCAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: MSSRLEGESPLPPFGRSIEPGAY*NSFQCR
Trigger: TCTGCACTGGAAAGAATTCAAATATGCACCTGGCTC...TATAGACCTGCCGAAAGGGGGCAGTGGTGACTCACCTTCCAATCTGCTGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp GCCATTCCCACTAGAGGCCAAACCGCCTGCCCACAGAGATTGACAGCCAATGTTGTTATTAAGCTGCCTTaGTACAGGATGCCCAAAAGT +
Preference number: 5 (lower is better)
Translates to: AIPTRGQTACPQRLTANVVIKLP*YRMPKS
Trigger: ACTTTTGGGCATCCTGTACAAAGGCAGCTTAATAAC...AACATTGGCTGTCAATCTCTGTGGGCAGGCGGTTTGGCCTCTAGTGGGAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp GAAGATTCACATCAGACATGGTCAAATACTCCCAGACACACACTTAGCCATATTAGAAGCTCATCCAGCTaGCGATCCTCCCGGCGCTCT +
Preference number: 5 (lower is better)
Translates to: EDSHQTWSNTPRHTLSHIRSSSS*RSSRRS
Trigger: AGAGCGCCGGGAGGATCGCAAGCTGGATGAGCTTCT...AATATGGCTAAGTGTGTGTCTGGGAGTATTTGACCATGTCTGATGTGAATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CAA 90 bp GGCTCTGTCAACATGGTAGCAGGACAAGTCACCACCCACAGTAGGACCATAGGGTGGTTCCAATTCTCTTaGAAGGAATCCCAATGTTCT +
Preference number: 5 (lower is better)
Translates to: GSVNMVAGQVTTHSRTIGWFQFS*KESQCS
Trigger: AGAACATTGGGATTCCTTCAAAGAGAATTGGAACCA...CCCTATGGTCCTACTGTGGGTGGTGACTTGTCCTGCTACCATGTTGACAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CAA 90 bp AAAATAGTGAAGGGAGCCAGGTGCATATTTGAATTCTTTCCAGTGCAGACTGGAGGCAGATGGGATCGCTaGAGGTCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: KIVKGARCIFEFFPVQTGGRWDR*RSGVRD
Trigger: GTCTCGAACTCCTGACCTCAAGCGATCCCATCTGCC...TCCAGTCTGCACTGGAAAGAATTCAAATATGCACCTGGCTCCCTTCACTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp AATCAAAGTGAGACTGGAAGAAGGGAGCCACCTGGATTCCCAAAGATAGGGCTCCAGAAATCTCCTTACTaGGTAGCTGACAGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: NQSETGRREPPGFPKIGLQKSPY*VADSLF
Trigger: GAAGAGACTGTCAGCTACCAAGTAAGGAGATTTCTG...GAGCCCTATCTTTGGGAATCCAGGTGGCTCCCTTCTTCCAGTCTCACTTTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp GACTCTGGCAAGGCTAATTCCATGATGTTTCACTCAGCGGCAGTCCCACCAGCCAGAACACTAATAGACTaGCTAGAGGAAGAATTCAGT +
Preference number: 5 (lower is better)
Translates to: DSGKANSMMFHSAAVPPARTLID*LEEEFS
Trigger: ACTGAATTCTTCCTCTAGCAAGTCTATTAGTGTTCT...GGCTGGTGGGACTGCCGCTGAGTGAAACATCATGGAATTAGCCTTGCCAGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp AAAATAGTGAAGGGAGCCAGGTGCATATTTGAATTCTTTCCAGTGCAGACTGGAGCCTGCCCACAGAGATaGACAGCCAATGTTCATCTC +
Preference number: 5 (lower is better)
Translates to: KIVKGARCIFEFFPVQTGACPQR*TANVHL
Trigger: GAGATGAACATTGGCTGTCAATCTCTGTGGGCAGGC...TCCAGTCTGCACTGGAAAGAATTCAAATATGCACCTGGCTCCCTTCACTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CAA 90 bp GAAAAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTGAGCCAGGTGCATATTaGAATTCTTTCCAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: EKCFPSWGNPIPELTRQIEPGAY*NSFQCR
Trigger: TCTGCACTGGAAAGAATTCAAATATGCACCTGGCTC...AATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446026.1
ENST00000456842.1
ENST00000521580.3
CDS-3UTR CAA 90 bp TGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAGTATACCTCCATTTAGACTaGAAGGTGCTGCAGCCAATT +
Preference number: 5 (lower is better)
Translates to: CFPSWGNPIPELTRQISVYLHLD*KVLQPI
Trigger: AATTGGCTGCAGCACCTTCAAGTCTAAATGGAGGTA...TACTGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS CCA 90 bp TTCTCTAGACGTAACACTATAAGGCAGCGGTCCCCAATCTATATTTaGCACCAGGGACCAGTTTCGTGGAAGACAATTTTTCCACAGATG +
Preference number: 5 (lower is better)
Translates to: FSRRNTIRQRSPIYI*HQGPVSWKTIFPQM
Trigger: CATCTGTGGAAAAATTGTCTTCCACGAAACTGGTCCCTGGTGCCAAATATAGATTGGGGACCGCTGCCTTATAGTGTTACGTCTAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CAA 90 bp AAGTGCTTTCCTTCCTGGGGGAATCCCATTCCTGAGCTGACAAGACAGATTTCAACTCCTAGAGCCCTTTaGGAAAGACATTTGGTGTTA +
Preference number: 5 (lower is better)
Translates to: KCFPSWGNPIPELTRQISTPRAL*ERHLVL
Trigger: TAACACCAAATGTCTTTCCAAAAGGGCTCTAGGAGT...TGAAATCTGTCTTGTCAGCTCAGGAATGGGATTCCCCCAGGAAGGAAAGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp AAGTCTCAGAATGTTAGGCAGAAAGATCCCAGAAGTTCAGAGGGGCACTCACCTTTTGTTCGTTTGTTTTaGAGACCAAGTGTCACTCTG +
Preference number: 5 (lower is better)
Translates to: KSQNVRQKDPRSSEGHSPFVRLF*RPSVTL
Trigger: CAGAGTGACACTTGGTCTCAAAAACAAACGAACAAA...AGGTGAGTGCCCCTCTGAACTTCTGGGATCTTTCTGCCTAACATTCTGAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS-3UTR CAA 90 bp AAAATAGTGAAGGGAGCCAGGTGCATATTTGAATTCTTTCCAGTGCAGACTGGAAGCACTCTAAACTGGTaGTCTCACTCTTTTCACACG +
Preference number: 5 (lower is better)
Translates to: KIVKGARCIFEFFPVQTGSTLNW*SHSFHT
Trigger: CGTGTGAAAAGAGTGAGACAACCAGTTTAGAGTGCT...TCCAGTCTGCACTGGAAAGAATTCAAATATGCACCTGGCTCCCTTCACTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp CCTAAGAAGACCCCCAAATACCACCTGGATGATAAGATTCGATCATTATGGTTCCTTTTGGAAAGACATTaGGTGTTATGCATGAGATCC +
Preference number: 5 (lower is better)
Translates to: PKKTPKYHLDDKIRSLWFLLERH*VLCMRS
Trigger: GGATCTCATGCATAACACCAAATGTCTTTCCAAAAG...GAACCATAATGATCGAATCTTATCATCCAGGTGGTATTTGGGGGTCTTCTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS-3UTR CAA 90 bp AAAATAGTGAAGGGAGCCAGGTGCATATTTGAATTCTTTCCAGTGCAGACTGGAGTAAAAACACACAAATaGGATCACTCTAATGGCCAA +
Preference number: 5 (lower is better)
Translates to: KIVKGARCIFEFFPVQTGVKTHK*DHSNGQ
Trigger: TTGGCCATTAGAGTGATCCAATTTGTGTGTTTTTAC...TCCAGTCTGCACTGGAAAGAATTCAAATATGCACCTGGCTCCCTTCACTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS-3UTR CAA 90 bp TCTAAACGAGTGACCAACCAGAAACAATTCAAATGTCCAGCAATATGGAAATTGAATCTCCTGACCAGCTaGTGCTTCTTGGTTCTTATG +
Preference number: 5 (lower is better)
Translates to: SKRVTNQKQFKCPAIWKLNLLTS*CFLVLM
Trigger: CATAAGAACCAAGAAGCACAAGCTGGTCAGGAGATT...CAATTTCCATATTGCTGGACATTTGAATTGTTTCTGGTTGGTCACTCGTTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521580.3
CDS GCA 72 bp GTAACTCAGAGGTTACTGGCCTGGGCTGACCCGACCTaGTCGCCGGGACCGCGCGCTCACCTGCGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: VTQRLLAWADPT*SPGPRAHLRPS
Trigger: GCTGGGCCGCAGGTGAGCGCGCGGTCCCGGCGAGCAGGTCGGGTCAGCCCAGGCCAGTAACCTCTGAGTTAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS CCA 72 bp GCGATCACTCCTCCCGTAACTCAGAGGTTACTGGCCTaGGCTGACCCGACCTGCTCGCCGGGACCGCGCGCT +
Preference number: 6 (lower is better)
Translates to: AITPPVTQRLLA*ADPTCSPGPRA
Trigger: AGCGCGCGGTCCCGGCGAGCAGGTCGGGTCAGCCCAGGCCAGTAACCTCTGAGTTACGGGAGGAGTGATCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS CCA 72 bp AGACTTGGCACCAGAACACCCGCCAGAGAGGGGAGCTaGCAGATCTGGCCGGGACCGGGGTGGACCCTAGCG +
Preference number: 6 (lower is better)
Translates to: RLGTRTPAREGS*QIWPGPGWTLA
Trigger: CGCTAGGGTCCACCCCGGTCCCGGCCAGATCTGCCAGCTCCCCTCTCTGGCGGGTGTTCTGGTGCCAAGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS CCA 72 bp GCCCTGTCTGCGGAGGGCTACCTGGGCTCCCAGACTTaGCACCAGAACACCCGCCAGAGAGGGGAGCTGGCA +
Preference number: 6 (lower is better)
Translates to: ALSAEGYLGSQT*HQNTRQRGELA
Trigger: TGCCAGCTCCCCTCTCTGGCGGGTGTTCTGGTGCCAAGTCTGGGAGCCCAGGTAGCCCTCCGCAGACAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS CCA 72 bp ACCAGAACACCCGCCAGAGAGGGGAGCTGGCAGATCTaGCCGGGACCGGGGTGGACCCTAGCGATCACTCCT +
Preference number: 6 (lower is better)
Translates to: TRTPAREGSWQI*PGPGWTLAITP
Trigger: AGGAGTGATCGCTAGGGTCCACCCCGGTCCCGGCCAGATCTGCCAGCTCCCCTCTCTGGCGGGTGTTCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS GCA 72 bp ACGTCCGTCCTCATTGAGGTGCCGAGAAGCCCTGTCTaGGGAGGGCTACCTGGGCTCCCAGACTTGGCACCA +
Preference number: 6 (lower is better)
Translates to: TSVLIEVPRSPV*GGLPGLPDLAP
Trigger: TGGTGCCAAGTCTGGGAGCCCAGGTAGCCCTCCGCAGACAGGGCTTCTCGGCACCTCAATGAGGACGGACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS CAA 90 bp CTGCTGGAGCCTCACAGCCTCATTCCAGCCACCTGCGTGTGGTCCTaGCCTAGAAGCTCATCCAGCTTGCGATCCTCCCGGCGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: LLEPHSLIPATCVWS*PRSSSSLRSSRRSE
Trigger: CTCAGAGCGCCGGGAGGATCGCAAGCTGGATGAGCTTCTAGGCAAGGACCACACGCAGGTGGCTGGAATGAGGCTGTGAGGCTCCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS GCA 72 bp CTCACAGCCTCATTCCAGCCACCTGCGTGTGGTCCTTaGCTAGAAGCTCATCCAGCTTGCGATCCTCCCGGC +
Preference number: 6 (lower is better)
Translates to: LTASFQPPACGP*LEAHPACDPPG
Trigger: GCCGGGAGGATCGCAAGCTGGATGAGCTTCTAGGCAAGGACCACACGCAGGTGGCTGGAATGAGGCTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS GCA 72 bp CGGCTGCTGGAGCCTCACAGCCTCATTCCAGCCACCTaGGTGTGGTCCTTGCCTAGAAGCTCATCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: RLLEPHSLIPAT*VWSLPRSSSSL
Trigger: CAAGCTGGATGAGCTTCTAGGCAAGGACCACACGCAGGTGGCTGGAATGAGGCTGTGAGGCTCCAGCAGCCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS GCA 72 bp CATTCATGGCCTCATCAACGTCCGTCCTCATTGAGGTaGCGAGAAGCCCTGTCTGCGGAGGGCTACCTGGGC +
Preference number: 6 (lower is better)
Translates to: HSWPHQRPSSLR*REALSAEGYLG
Trigger: GCCCAGGTAGCCCTCCGCAGACAGGGCTTCTCGGCACCTCAATGAGGACGGACGTTGATGAGGCCATGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS CAA 72 bp CCTCACAGCCTCATTCCAGCCACCTGCGTGTGGTCCTaGCCTAGAAGCTCATCCAGCTTGCGATCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: PHSLIPATCVWS*PRSSSSLRSSR
Trigger: CCGGGAGGATCGCAAGCTGGATGAGCTTCTAGGCAAGGACCACACGCAGGTGGCTGGAATGAGGCTGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS CAA 90 bp GGCCACATGACATCTCATTCATGGCCTCATCAACGTCCGTCCTCATaGAGGTGCCGAGAAGCCCTGTCTGCGGAGGGCTACCTGGGCTCC +
Preference number: 6 (lower is better)
Translates to: GHMTSHSWPHQRPSS*RCREALSAEGYLGS
Trigger: GGAGCCCAGGTAGCCCTCCGCAGACAGGGCTTCTCGGCACCTCAATGAGGACGGACGTTGATGAGGCCATGAATGAGATGTCATGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS CCA 72 bp CCAGGTTTCTACTGCCTCGTGGCACAAAACGGCTGCTaGAGCCTCACAGCCTCATTCCAGCCACCTGCGTGT +
Preference number: 6 (lower is better)
Translates to: PGFYCLVAQNGC*SLTASFQPPAC
Trigger: ACACGCAGGTGGCTGGAATGAGGCTGTGAGGCTCCAGCAGCCGTTTTGTGCCACGAGGCAGTAGAAACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS CAA 90 bp GCTGATCTATCAGAAGGTGGAGCTCAGGCGGTAATGCTTGCCAGCTaGCCCACCGCTCACCTCCTGCTGTGCAGCCCAGTTTCTAATGGG +
Preference number: 6 (lower is better)
Translates to: ADLSEGGAQAVMLAS*PTAHLLLCSPVSNG
Trigger: CCCATTAGAAACTGGGCTGCACAGCAGGAGGTGAGCGGTGGGCAAGCTGGCAAGCATTACCGCCTGAGCTCCACCTTCTGATAGATCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS TCA 72 bp CATCTCATTCATGGCCTCATCAACGTCCGTCCTCATTaGGGTGCCGAGAAGCCCTGTCTGCGGAGGGCTACC +
Preference number: 6 (lower is better)
Translates to: HLIHGLINVRPH*GAEKPCLRRAT
Trigger: GGTAGCCCTCCGCAGACAGGGCTTCTCGGCACCTCAATGAGGACGGACGTTGATGAGGCCATGAATGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS GCA 72 bp GGCAGCTCCACAGTCATCAGGAACCCAGGTTTCTACTaGCTCGTGGCACAAAACGGCTGCTGGAGCCTCACA +
Preference number: 6 (lower is better)
Translates to: GSSTVIRNPGFY*LVAQNGCWSLT
Trigger: TGTGAGGCTCCAGCAGCCGTTTTGTGCCACGAGGCAGTAGAAACCTGGGTTCCTGATGACTGTGGAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426886.1
CDS GCA 72 bp ATGCTTGCCAGCTTGCCCACCGCTCACCTCCTGCTGTaGAGCCCAGTTTCTAATGGGCTGAAGACCACCACT +
Preference number: 6 (lower is better)
Translates to: MLASLPTAHLLL*SPVSNGLKTTT
Trigger: AGTGGTGGTCTTCAGCCCATTAGAAACTGGGCTGCACAGCAGGAGGTGAGCGGTGGGCAAGCTGGCAAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS CCA 72 bp CCAGTTTCTAATGGGCTGAAGACCACCACTGGTCTGTaGCCCAGGGGGTTAAGGACCCCTGCAATAAGGCAG +
Preference number: 6 (lower is better)
Translates to: PVSNGLKTTTGL*PRGLRTPAIRQ
Trigger: CTGCCTTATTGCAGGGGTCCTTAACCCCCTGGGCCACAGACCAGTGGTGGTCTTCAGCCCATTAGAAACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS CAA 72 bp ACATCTCATTCATGGCCTCATCAACGTCCGTCCTCATaGAGGTGCCGAGAAGCCCTGTCTGCGGAGGGCTAC +
Preference number: 6 (lower is better)
Translates to: TSHSWPHQRPSS*RCREALSAEGY
Trigger: GTAGCCCTCCGCAGACAGGGCTTCTCGGCACCTCAATGAGGACGGACGTTGATGAGGCCATGAATGAGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423898.1
CDS GCA 72 bp CAAAAGGCTAAGAACCGTGTCTGTCTGGCCCAATTATaGCCTATCCATCCAGGCACCTCTCCTACCCTGCCT +
Preference number: 6 (lower is better)
Translates to: QKAKNRVCLAQL*PIHPGTSPTLP
Trigger: AGGCAGGGTAGGAGAGGTGCCTGGATGGATAGGGCATAATTGGGCCAGACAGACACGGTTCTTAGCCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417239.1
ENST00000446026.1
CDS CAA 90 bp ACCAGGGACCAGTTTCGTGGAAGACAATTTTTCCACAGATGGGGGTaGGAGAGGGATGGTTTCGGGATGAAACTGTTCCAGCTCAGATCA +
Preference number: 6 (lower is better)
Translates to: TRDQFRGRQFFHRWG*ERDGFGMKLFQLRS
Trigger: TGATCTGAGCTGGAACAGTTTCATCCCGAAACCATCCCTCTCCAACCCCCATCTGTGGAAAAATTGTCTTCCACGAAACTGGTCCCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS CCA 72 bp ACTTTAAGCTCCAAAAGGCTAAGAACCGTGTCTGTCTaGCCCAATTATGCCCTATCCATCCAGGCACCTCTC +
Preference number: 6 (lower is better)
Translates to: TLSSKRLRTVSV*PNYALSIQAPL
Trigger: GAGAGGTGCCTGGATGGATAGGGCATAATTGGGCCAGACAGACACGGTTCTTAGCCTTTTGGAGCTTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417239.1
ENST00000446026.1
CDS GCA 72 bp TACTCTGTGTCAGGCACGATGCTGGCTTACCCTGTCTaGGTTTCTCAAGACACTTTAAGCTCCAAAAGGCTA +
Preference number: 6 (lower is better)
Translates to: YSVSGTMLAYPV*VSQDTLSSKRL
Trigger: TAGCCTTTTGGAGCTTAAAGTGTCTTGAGAAACGCAGACAGGGTAAGCCAGCATCGTGCCTGACACAGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS GCA 72 bp AACATATCGCGCATGAGTTCACAACTATCTCTCACATaGAGCATAAAGTCTCTCGCTACCGTCCTGCTCACA +
Preference number: 6 (lower is better)
Translates to: NISRMSSQLSLT*SIKSLATVLLT
Trigger: TGTGAGCAGGACGGTAGCGAGAGACTTTATGCTGCATGTGAGAGATAGTTGTGAACTCATGCGCGATATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS GCA 72 bp TCAAAGCCTACACTCTTTCTAGTGGGAAGAACACACTaGAGAGGTATACGGTTTCTGTCCAAACCCTGGACT +
Preference number: 6 (lower is better)
Translates to: SKPTLFLVGRTH*RGIRFLSKPWT
Trigger: AGTCCAGGGTTTGGACAGAAACCGTATACCTCTGCAGTGTGTTCTTCCCACTAGAAAGAGTGTAGGCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS CCA 72 bp AAGACAATTTTTCCACAGATGGGGGTTGGAGAGGGATaGTTTCGGGATGAAACTGTTCCAGCTCAGATCATC +
Preference number: 6 (lower is better)
Translates to: KTIFPQMGVGEG*FRDETVPAQII
Trigger: GATGATCTGAGCTGGAACAGTTTCATCCCGAAACCATCCCTCTCCAACCCCCATCTGTGGAAAAATTGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS CCA 72 bp CGTAACACTATAAGGCAGCGGTCCCCAATCTATATTTaGCACCAGGGACCAGTTTCGTGGAAGACAATTTTT +
Preference number: 6 (lower is better)
Translates to: RNTIRQRSPIYI*HQGPVSWKTIF
Trigger: AAAAATTGTCTTCCACGAAACTGGTCCCTGGTGCCAAATATAGATTGGGGACCGCTGCCTTATAGTGTTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS CAA 72 bp GGCCACATGACATCTAATAGAGCTTCAAGCCTATTGTaGACCCCAGGACCTAGTCTGCCAACATTTCAAGAA +
Preference number: 6 (lower is better)
Translates to: GHMTSNRASSLL*TPGPSLPTFQE
Trigger: TTCTTGAAATGTTGGCAGACTAGGTCCTGGGGTCAACAATAGGCTTGAAGCTCTATTAGATGTCATGTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417239.1
CDS CAA 72 bp ACAGGCCACATGACATCTAATAGAGCTTCAAGCCTATaGTTGACCCCAGGACCTAGTCTGCCAACATTTCAA +
Preference number: 6 (lower is better)
Translates to: TGHMTSNRASSL*LTPGPSLPTFQ
Trigger: TTGAAATGTTGGCAGACTAGGTCCTGGGGTCAACAATAGGCTTGAAGCTCTATTAGATGTCATGTGGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417239.1
CDS TCA 72 bp TTTCAAGAAGGGAAAAAGATGCCTTTCTCTGCTCTATaGAATTTCTCCATGAGCACAGCCGGCCACCTTTTC +
Preference number: 6 (lower is better)
Translates to: FQEGKKMPFSAL*NFSMSTAGHLF
Trigger: GAAAAGGTGGCCGGCTGTGCTCATGGAGAAATTTCATAGAGCAGAGAAAGGCATCTTTTTCCCTTCTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417239.1
CDS TCA 72 bp TATACACTCACTCTCTTAATCCTCATGTCCACCACGTaGGGTAGATACATAACCCACTATCAGAGGGTTAAG +
Preference number: 6 (lower is better)
Translates to: YTLTLLILMSTT*GRYITHYQRVK
Trigger: CTTAACCCTCTGATAGTGGGTTATGTATCTACCTCACGTGGTGGACATGAGGATTAAGAGAGTGAGTGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS CAA 72 bp TATCCAAGATCACTAGAAGTGATAGAGCCACTGATTTaGAACCCAGGCCTCTCCAATTTCAAAGCCTACACT +
Preference number: 6 (lower is better)
Translates to: YPRSLEVIEPLI*NPGLSNFKAYT
Trigger: AGTGTAGGCTTTGAAATTGGAGAGGCCTGGGTTCAAAATCAGTGGCTCTATCACTTCTAGTGATCTTGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS CAA 90 bp ATGTTAACTTATCCAAGATCACTAGAAGTGATAGAGCCACTGATTTaGAACCCAGGCCTCTCCAATTTCAAAGCCTACACTCTTTCTAGT +
Preference number: 6 (lower is better)
Translates to: MLTYPRSLEVIEPLI*NPGLSNFKAYTLSS
Trigger: ACTAGAAAGAGTGTAGGCTTTGAAATTGGAGAGGCCTGGGTTCAAAATCAGTGGCTCTATCACTTCTAGTGATCTTGGATAAGTTAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446026.1
CDS TCA 72 bp AACACAATCTACGATGAATCTCCTGGTTTCACAATATaGAAAGTCGTTCCTTTTCCCTGTCTGCGTTTCTCA +
Preference number: 6 (lower is better)
Translates to: NTIYDESPGFTI*KVVPFPCLRFS
Trigger: TGAGAAACGCAGACAGGGAAAAGGAACGACTTTTCATATTGTGAAACCAGGAGATTCATCGTAGATTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417239.1