RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMC1A (Homo sapiens)

Ensembl gene IDs: ENSG00000072501

Ensembl transcript IDs: ENST00000322213.9, ENST00000375340.10, ENST00000463684.1, ENST00000469129.1, ENST00000470241.2, ENST00000674590.1, ENST00000675065.1, ENST00000675504.1

Found 1351 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACACTGTGGTGCCCAGCCTCCCGTGAGCATAGCCTTGACAACGGTTaGCCTGTGATGCCAGGAGGTGGTGGGGCACGACAGGAGAGAGCA +
Preference number: 1 (lower is better)
Translates to: TLWCPASREHSLDNG*PVMPGGGGARQERA
Trigger: TGCTCTCTCCTGTCGTGCCCCACCACCTCCTGGCATCACAGGGCAACCGTTGTCAAGGCTATGCTCACGGGAGGCTGGGCACCACAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 90 bp GGGCCAGGAGGTAGGGGGAAGGTTGGGAGTCAAATATCCAGAGATTaGGAGAGGGACAGCTTAGGGATCCAGACAGGGCGGGAGGGCAAA +
Preference number: 1 (lower is better)
Translates to: GPGGRGKVGSQISRD*ERDSLGIQTGREGK
Trigger: TTTGCCCTCCCGCCCTGTCTGGATCCCTAAGCTGTCCCTCTCCCAATCTCTGGATATTTGACTCCCAACCTTCCCCCTACCTCCTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 90 bp GCCCTAGGGAATCTACTCGGATCCAGCTTGCTCTTGGAAACACTGTaGTGCCCAGCCTCCCGTGAGCATAGCCTTGACAACGGTTGCCCT +
Preference number: 1 (lower is better)
Translates to: ALGNLLGSSLLLETL*CPASREHSLDNGCP
Trigger: AGGGCAACCGTTGTCAAGGCTATGCTCACGGGAGGCTGGGCACCACAGTGTTTCCAAGAGCAAGCTGGATCCGAGTAGATTCCCTAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 90 bp TACAGGTTTCCTCAGGCCCTCCGCTTACCAGGTAGACCCCATCAGTaGCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAG +
Preference number: 1 (lower is better)
Translates to: YRFPQALRLPGRPHQ*PETFPVSRAFSTFQ
Trigger: CTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGCACTGATGGGGTCTACCTGGTAAGCGGAGGGCCTGAGGAAACCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 90 bp CTAGGGAATCTACTCGGATCCAGCTTGCTCTTGGAAACACTGTGGTaGCCAGCCTCCCGTGAGCATAGCCTTGACAACGGTTGCCCTGTG +
Preference number: 1 (lower is better)
Translates to: LGNLLGSSLLLETLW*PASREHSLDNGCPV
Trigger: CACAGGGCAACCGTTGTCAAGGCTATGCTCACGGGAGGCTGGGCACCACAGTGTTTCCAAGAGCAAGCTGGATCCGAGTAGATTCCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 90 bp CACATGCGGATACATACATACACACATACATACCCACACACACAGTaGGCAAGAGGCCCAAGGGGCCCACGATTATGGGTGATGAGGGGG +
Preference number: 1 (lower is better)
Translates to: HMRIHTYTHTYPHTQ*ARGPRGPRLWVMRG
Trigger: CCCCCTCATCACCCATAATCGTGGGCCCCTTGGGCCTCTTGCCCACTGTGTGTGTGGGTATGTATGTGTGTATGTATGTATCCGCATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 90 bp CGTGGCTCCTATTGCTTCATGGCTTCTAGCCCATTGTTGCCTTGCTaGTTCATGGCTTCTGCCACCCTGTGGCTCCGTGATCTCATTATA +
Preference number: 1 (lower is better)
Translates to: RGSYCFMASSPLLPC*FMASATLWLRDLII
Trigger: TATAATGAGATCACGGAGCCACAGGGTGGCAGAAGCCATGAAGCAGCAAGGCAACAATGGGCTAGAAGCCATGAAGCAATAGGAGCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 90 bp ATGCTAGCCCATGGCTTTTTCTGCCTCATGGGTCCTGCAGCTTCATaGCTCCCGGCGCTTCAGTTCCTATTAATCCATGGCTTTTCTGCA +
Preference number: 1 (lower is better)
Translates to: MLAHGFFCLMGPAAS*LPALQFLLIHGFSA
Trigger: TGCAGAAAAGCCATGGATTAATAGGAACTGAAGCGCCGGGAGCCATGAAGCTGCAGGACCCATGAGGCAGAAAAAGCCATGGGCTAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 90 bp CCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTaGAGGCTTCTTCTGTCCCTAATAGCTGGGATCAGAAGCTCTCAG +
Preference number: 1 (lower is better)
Translates to: PETFPVSRAFSTFQI*RLLLSLIAGIRSSQ
Trigger: CTGAGAGCTTCTGATCCCAGCTATTAGGGACAGAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 90 bp TCCTGCTGCCTCTTCCATTCCTGTTGCCATGTTGCCACATGGTTCTaGCTACCTTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCA +
Preference number: 1 (lower is better)
Translates to: SCCLFHSCCHVATWF*LPCGSCSLIASTVS
Trigger: TGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAAGGTAGCCAGAACCATGTGGCAACATGGCAACAGGAATGGAAGAGGCAGCAGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 90 bp AGTTTTGTCTCACGGTTTCTGTTCCTCGTGGCTCCTATTGCTTCATaGCTTCTAGCCCATTGTTGCCTTGCTGCTTCATGGCTTCTGCCA +
Preference number: 1 (lower is better)
Translates to: SFVSRFLFLVAPIAS*LLAHCCLAASWLLP
Trigger: TGGCAGAAGCCATGAAGCAGCAAGGCAACAATGGGCTAGAAGCCATGAAGCAATAGGAGCCACGAGGAACAGAAACCGTGAGACAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 90 bp CATAGTCAGTTTTGTCTCACGGTTTCTGTTCCTCGTGGCTCCTATTaGTTCATGGCTTCTAGCCCATTGTTGCCTTGCTGCTTCATGGCT +
Preference number: 1 (lower is better)
Translates to: HSQFCLTVSVPRGSY*FMASSPLLPCCFMA
Trigger: AGCCATGAAGCAGCAAGGCAACAATGGGCTAGAAGCCATGAAGCAATAGGAGCCACGAGGAACAGAAACCGTGAGACAAAACTGACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 90 bp GAGTACCTTTGCCCAGCTCAGGGGTGCTGTCATCCTAAGCTCTCTTaGAATCAAATTCAGCCTAGGCTCCTTCTAAAACAGGTCTCCAAT +
Preference number: 1 (lower is better)
Translates to: EYLCPAQGCCHPKLS*NQIQPRLLLKQVSN
Trigger: ATTGGAGACCTGTTTTAGAAGGAGCCTAGGCTGAATTTGATTCCAAGAGAGCTTAGGATGACAGCACCCCTGAGCTGGGCAAAGGTACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 90 bp CTAGCTATCTGTGGCCAGGATTGTGAGGTCACATGGTACAGAGCATaGCAACTTATGCTAAGGAAACCCCTTAGAAGGGACTGCAAGCAT +
Preference number: 1 (lower is better)
Translates to: LAICGQDCEVTWYRA*QLMLRKPLRRDCKH
Trigger: ATGCTTGCAGTCCCTTCTAAGGGGTTTCCTTAGCATAAGTTGCCATGCTCTGTACCATGTGACCTCACAATCCTGGCCACAGATAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 90 bp TCTAGCCCATTGTTGCCTTGCTGCTTCATGGCTTCTGCCACCCTGTaGCTCCGTGATCTCATTATACAAATGTCTCATGACCTCTGCTTA +
Preference number: 1 (lower is better)
Translates to: SSPLLPCCFMASATL*LRDLIIQMSHDLCL
Trigger: TAAGCAGAGGTCATGAGACATTTGTATAATGAGATCACGGAGCCACAGGGTGGCAGAAGCCATGAAGCAGCAAGGCAACAATGGGCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR TCA 90 bp TTGAACCAGACACTATCCACATCTAGCTATCTGTGGCCAGGATTGTaGGGTCACATGGTACAGAGCATGGCAACTTATGCTAAGGAAACC +
Preference number: 1 (lower is better)
Translates to: LNQTLSTSSYLWPGL*GHMVQSMATYAKET
Trigger: GGTTTCCTTAGCATAAGTTGCCATGCTCTGTACCATGTGACCTCACAATCCTGGCCACAGATAGCTAGATGTGGATAGTGTCTGGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 90 bp CTTCCATTCCTGTTGCCATGTTGCCACATGGTTCTGGCTACCTTGTaGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCT +
Preference number: 1 (lower is better)
Translates to: LPFLLPCCHMVLATL*FLQSHRFYCLMILS
Trigger: AGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAAGGTAGCCAGAACCATGTGGCAACATGGCAACAGGAATGGAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 90 bp AAGTTTCTACAGCTAGAATTTGAACCAGGTCTGACCCCCGAATTGTaGTCGTCCATAAAGGCCAGCATTTGCCAAATTATGGCACACAGT +
Preference number: 1 (lower is better)
Translates to: KFLQLEFEPGLTPEL*SSIKASICQIMAHS
Trigger: ACTGTGTGCCATAATTTGGCAAATGCTGGCCTTTATGGACGAGCACAATTCGGGGGTCAGACCTGGTTCAAATTCTAGCTGTAGAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR TCA 90 bp AATTTTTGCTCCAGACCTAACATCACCTCTGTTCCTCTTCATGCTTaGTTAGCAGTGCCTAAATCCCATGACTACACCAAAAAGGGCCAG +
Preference number: 1 (lower is better)
Translates to: NFCSRPNITSVPLHA*LAVPKSHDYTKKGQ
Trigger: CTGGCCCTTTTTGGTGTAGTCATGGGATTTAGGCACTGCTAATCAAGCATGAAGAGGAACAGAGGTGATGTTAGGTCTGGAGCAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR TCA 90 bp TCTGAGGACCTCAGAAGGGGTTTGGGCAGTCTTCCCTTACAAGTCTaGCATTCTGGGTATCTCACTATAAGTTATTGTATAAGAGATGTG +
Preference number: 1 (lower is better)
Translates to: SEDLRRGLGSLPLQV*HSGYLTISYCIRDV
Trigger: CACATCTCTTATACAATAACTTATAGTGAGATACCCAGAATGTCAGACTTGTAAGGGAAGACTGCCCAAACCCCTTCTGAGGTCCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 90 bp CATTTCATGGCTCCCTCACTGCCTTCAAGCTATGGTTTCCAAATCTaGCTGTACCCTAGTCATGTGGTAACCTTTATAAGCATTCAAGAT +
Preference number: 1 (lower is better)
Translates to: HFMAPSLPSSYGFQI*LYPSHVVTFISIQD
Trigger: ATCTTGAATGCTTATAAAGGTTACCACATGACTAGGGTACAGCCAGATTTGGAAACCATAGCTTGAAGGCAGTGAGGGAGCCATGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 90 bp TTTTTATCCTGTGAGGTAGGGGTTAGTTATCTGGGTTATTATCCATaGTGGCTGAATCAGATTTCCAGAGGTGGGACCAGAGCAATTTAT +
Preference number: 1 (lower is better)
Translates to: FLSCEVGVSYLGYYP*WLNQISRGGTRAIY
Trigger: ATAAATTGCTCTGGTCCCACCTCTGGAAATCTGATTCAGCCAGCATGGATAATAACCCAGATAACTAACCCCTACCTCACAGGATAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 90 bp ACCCTGTGGCTCCGTGATCTCATTATACAAATGTCTCATGACCTCTaGTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTT +
Preference number: 1 (lower is better)
Translates to: TLWLRDLIIQMSHDL*LLMVSAAFSLLLLF
Trigger: AAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCATGAGACATTTGTATAATGAGATCACGGAGCCACAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 90 bp TCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGCCTTCTaGTGCTTTGTGGATCTCATAGTCAGTTTTGTCTCACGGTTTCTG +
Preference number: 1 (lower is better)
Translates to: SHRFYCLMILSIQAF*CFVDLIVSFVSRFL
Trigger: CAGAAACCGTGAGACAAAACTGACTATGAGATCCACAAAGCAGCAGAAGGCTTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 90 bp TTATCCTGTGAGGTAGGGGTTAGTTATCTGGGTTATTATCCATGCTaGCTGAATCAGATTTCCAGAGGTGGGACCAGAGCAATTTATTTT +
Preference number: 1 (lower is better)
Translates to: LSCEVGVSYLGYYPC*LNQISRGGTRAIYF
Trigger: AAAATAAATTGCTCTGGTCCCACCTCTGGAAATCTGATTCAGCCAGCATGGATAATAACCCAGATAACTAACCCCTACCTCACAGGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 90 bp CCTCAGAAGGGGTTTGGGCAGTCTTCCCTTACAAGTCTGACATTCTaGGTATCTCACTATAAGTTATTGTATAAGAGATGTGACTCTTAC +
Preference number: 1 (lower is better)
Translates to: PQKGFGQSSLTSLTF*VSHYKLLYKRCDSY
Trigger: GTAAGAGTCACATCTCTTATACAATAACTTATAGTGAGATACCCAGAATGTCAGACTTGTAAGGGAAGACTGCCCAAACCCCTTCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 90 bp CTCCAATATCCTTTATTATTTTGCAAACATACTCACATGCACACATaGGGATACATACATACACACATACATACCCACACACACAGTGGG +
Preference number: 1 (lower is better)
Translates to: LQYPLLFCKHTHMHT*GYIHTHIHTHTHSG
Trigger: CCCACTGTGTGTGTGGGTATGTATGTGTGTATGTATGTATCCGCATGTGTGCATGTGAGTATGTTTGCAAAATAATAAAGGATATTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 90 bp CATAAAGGCCAGCATTTGCCAAATTATGGCACACAGTACCACCAGTaGTACGTGACTTCTTTGGTTGAAAACAGACAAATTTATTTTGTT +
Preference number: 1 (lower is better)
Translates to: HKGQHLPNYGTQYHQ*YVTSLVENRQIYFV
Trigger: AACAAAATAAATTTGTCTGTTTTCAACCAAAGAAGTCACGTACCACTGGTGGTACTGTGTGCCATAATTTGGCAAATGCTGGCCTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 90 bp CATGCTTCAGTATTTGTTTTGCTGTTTCTTGCCTTCATGTCTTCATaGATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCAAC +
Preference number: 1 (lower is better)
Translates to: HASVFVLLFLAFMSS*ILFPISGNSFYFLN
Trigger: GTTGAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAAGGCAAGAAACAGCAAAACAAATACTGAAGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 90 bp TTCCTCCAACAAGCCCTAGGGAATCTACTCGGATCCAGCTTGCTCTaGGAAACACTGTGGTGCCCAGCCTCCCGTGAGCATAGCCTTGAC +
Preference number: 2 (lower is better)
Translates to: FLQQALGNLLGSSLL*ETLWCPASREHSLD
Trigger: GTCAAGGCTATGCTCACGGGAGGCTGGGCACCACAGTGTTTCCAAGAGCAAGCTGGATCCGAGTAGATTCCCTAGGGCTTGTTGGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTCCAAGCACAGAGCCTaGCAAATAGAGGGTGTTCGG +
Preference number: 2 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGSKHRA*QIEGVR
Trigger: CCGAACACCCTCTATTTGTCAGGCTCTGTGCTTGGA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGACAACGGTTGCCCTGTaGTGCCAGGAGGTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQTTVAL*CQEVVG
Trigger: CCCCACCACCTCCTGGCATCACAGGGCAACCGTTGT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTGTGTGATGAACAGATaGCCCTGTTCAGCTCAGCAC +
Preference number: 2 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGCVMNR*PCSAQH
Trigger: GTGCTGAGCTGAACAGGGCCATCTGTTCATCACACA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAAGGGGCCCACGATTATaGGTGATGAGGGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPRGPRL*VMRGRK
Trigger: CTTCCTCCCCCTCATCACCCATAATCGTGGGCCCCT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCGCACAGAAGGTCAAATaGCTTGCCCAAGGTCAAACA +
Preference number: 2 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGAQKVK*LAQGQT
Trigger: TGTTTGACCTTGGGCAAGTCATTTGACCTTCTGTGC...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CTTGGCTGCTTCCAGCTTCTTGATTTTGTGGGAGGTGTTCTCCTTGGCTTTGATCGCTTGTCATACTCCTaGGCCAGCTCCCCAGAACGA +
Preference number: 2 (lower is better)
Translates to: LGCFQLLDFVGGVLLGFDRLSYS*ASSPER
Trigger: TCGTTCTGGGGAGCTGGCGCAGGAGTATGACAAGCG...ATCAAAGCCAAGGAGAACACCTCCCACAAAATCAAGAAGCTGGAAGCAGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463684.1
3UTR-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGAGCTCCACATCCTTTaGATGTGGGGGTGCAAGCAG +
Preference number: 2 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPELHIL*MWGCKQ
Trigger: CTGCTTGCACCCCCACATCCAAAGGATGTGGAGCTC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCTCTTGGAAACACTGTaGTGCCCAGCCTCCCGTGAG +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQLLETL*CPASRE
Trigger: CTCACGGGAGGCTGGGCACCACAGTGTTTCCAAGAG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCATCCAAGCACAGAGCCTaGCAAATAGAGGGTGTTCGG +
Preference number: 2 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPSKHRA*QIEGVR
Trigger: CCGAACACCCTCTATTTGTCAGGCTCTGTGCTTGGA...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCTGACCCCCGAATTGTaGTCGTCCATAAAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQLTPEL*SSIKAS
Trigger: GCTGGCCTTTATGGACGAGCACAATTCGGGGGTCAG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCTTTGGATGTGGGGGTaGAAGCAGGGAACTGCTGCT +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQLWMWG*KQGTAA
Trigger: AGCAGCAGTTCCCTGCTTGCACCCCCACATCCAAAG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGGTCCTGCAGCTTCATaGCTCCCGGCGCTTCAGTTC +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLGPAAS*LPALQF
Trigger: GAACTGAAGCGCCGGGAGCCATGAAGCTGCAGGACC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCATGCCTAAGACTCCTATaGGGTCCTGAGTACCTTTGC +
Preference number: 2 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPCLRLL*GPEYLC
Trigger: GCAAAGGTACTCAGGACCTCATAGGAGTCTTAGGCA...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGGTCCTGAGTACCTTTaGCCAGCTCAGGGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLGPEYL*PAQGCC
Trigger: ACAGCACCCCTGAGCTGGGCAAAGGTACTCAGGACC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGACATGTGTTCCTGTGTaGCAGGGCCTTAGCCTAAGG +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQTCVPV*QGLSLR
Trigger: CCTTAGGCTAAGGCCCTGGCACACAGGAACACATGT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAAGGGGCCCACGATTATaGGTGATGAGGGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLRGPRL*VMRGRK
Trigger: CTTCCTCCCCCTCATCACCCATAATCGTGGGCCCCT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCACATCCTTTGGATGTaGGGGTGCAAGCAGGGAACT +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQHILWM*GCKQGT
Trigger: AGTTCCCTGCTTGCACCCCCACATCCAAAGGATGTG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTGTGATGCCAGGAGGTaGTGGGGCACGACAGGAGAG +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSCDARR*WGTTGE
Trigger: CTCTCCTGTCGTGCCCCACCACCTCCTGGCATCACA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATGCCTTGCTGCTTCATaGCTTCTGCCACCCTGTGGC +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLCLAAS*LLPPCG
Trigger: GCCACAGGGTGGCAGAAGCCATGAAGCAGCAAGGCA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACTGTGGCCAGGATTGTaGGGTCACATGGTACAGAGC +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLWPGL*GHMVQS
Trigger: GCTCTGTACCATGTGACCTCACAATCCTGGCCACAG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACTGACCCCCGAATTGTaGTCGTCCATAAAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLTPEL*SSIKAS
Trigger: GCTGGCCTTTATGGACGAGCACAATTCGGGGGTCAG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTACCCACACACACAGTaGGCAAGAGGCCCAAGGGGC +
Preference number: 2 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLYPHTQ*ARGPRG
Trigger: GCCCCTTGGGCCTCTTGCCCACTGTGTGTGTGGGTA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTCTGTCCCTAATAGCTaGGATCAGAAGCTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQSVPNS*DQKLSG
Trigger: CCCTGAGAGCTTCTGATCCCAGCTATTAGGGACAGA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGATGCCAGGAGGTGGTaGGGCACGACAGGAGAGAGC +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLDARRW*GTTGES
Trigger: GCTCTCTCCTGTCGTGCCCCACCACCTCCTGGCATC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 90 bp TTGGAAGAGCCTTACTGCACACTGGAGGTGCTTAGCCAAGATTTATaGAACTGGATGAATGAATCAATGGCTTGTGGAGGGGTGGGGAGT +
Preference number: 2 (lower is better)
Translates to: LEEPYCTLEVLSQDL*NWMNESMACGGVGS
Trigger: ACTCCCCACCCCTCCACAAGCCATTGATTCATTCATCCAGTTCAATAAATCTTGGCTAAGCACCTCCAGTGTGCAGTAAGGCTCTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 90 bp CCTCTTCCATTCCTGTTGCCATGTTGCCACATGGTTCTGGCTACCTaGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTA +
Preference number: 2 (lower is better)
Translates to: PLPFLLPCCHMVLAT*WFLQSHRFYCLMIL
Trigger: TAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAAGGTAGCCAGAACCATGTGGCAACATGGCAACAGGAATGGAAGAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTCAGGGGTCCAGGCATaGGGGTTATATTCTGAGGGG +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSSGVQA*GLYSEG
Trigger: CCCCTCAGAATATAACCCTCATGCCTGGACCCCTGA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGAGAAAGCACTTGAATaGCTTGGAAGACCTGGGTTC +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQEKALE*LGRPGF
Trigger: GAACCCAGGTCTTCCAAGTCATTCAAGTGCTTTCTC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACGCACCCGGCTTTGCTaGCTCTGCATGATCCTTATA +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLRTRLC*LCMILI
Trigger: TATAAGGATCATGCAGAGGCAGCAAAGCCGGGTGCG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCTAATCTGTTTTCCATaGTGGTTGGCTAGCCAGCCA +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQLICFP*WLASQP
Trigger: TGGCTGGCTAGCCAACCAGCATGGAAAACAGATTAG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTAGGGGCCCACGATTATaGGTGATGAGGGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLRGPRL*VMRGRK
Trigger: CTTCCTCCCCCTCATCACCCATAATCGTGGGCCCCT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATACCCACACACACAGTaGGCAAGAGGCCCAAGGGGC +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLYPHTQ*ARGPRG
Trigger: GCCCCTTGGGCCTCTTGCCCACTGTGTGTGTGGGTA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATACCCACACACACAGTaGGCAAGAGGCCCAAGGGGC +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQYPHTQ*ARGPRG
Trigger: GCCCCTTGGGCCTCTTGCCCACTGTGTGTGTGGGTA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAATGACTTGGAAGACCTaGGTTCAAACCTTTTTGGGC +
Preference number: 2 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPMTWKT*VQTFLG
Trigger: GCCCAAAAAGGTTTGAACCCAGGTCTTCCAAGTCAT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCTAAATAGATCCGAGTaGAAGTCTAGGCTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQLNRSE*KSRLCH
Trigger: GTGGCAGAGCCTAGACTTCCACTCGGATCTATTTAG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATGTGATGCCAGGAGGTaGTGGGGCACGACAGGAGAG +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLCDARR*WGTTGE
Trigger: CTCTCCTGTCGTGCCCCACCACCTCCTGGCATCACA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTGCCGTACCTGTTTGTaGTATACAGCCAGTTTGGGA +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQCRTCL*YTASLG
Trigger: TCCCAAACTGGCTGTATACCACAAACAGGTACGGCA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGATCTGTTTTCCATGCTaGTTGGCTAGCCAGCCAGAA +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQICFPC*LASQPE
Trigger: TTCTGGCTGGCTAGCCAACCAGCATGGAAAACAGAT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGTCAGAGTCCTGGCTTaGAAGAGCCTTACTGCACAC +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLVRVLA*KSLTAH
Trigger: GTGTGCAGTAAGGCTCTTCCAAGCCAGGACTCTGAC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAAGGGAGTCAGAGTCCTaGCTTGGAAGAGCCTTACTG +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLRESES*LGRALL
Trigger: CAGTAAGGCTCTTCCAAGCCAGGACTCTGACTCCCT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 90 bp CACAAGTTTCTACAGCTAGAATTTGAACCAGGTCTGACCCCCGAATaGTGCTCGTCCATAAAGGCCAGCATTTGCCAAATTATGGCACAC +
Preference number: 2 (lower is better)
Translates to: HKFLQLEFEPGLTPE*CSSIKASICQIMAH
Trigger: GTGTGCCATAATTTGGCAAATGCTGGCCTTTATGGACGAGCACAATTCGGGGGTCAGACCTGGTTCAAATTCTAGCTGTAGAAACTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 90 bp ACTGTGATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTaGTGGAGTACTCTTCAACTCCCTACAGCAAGGCTACTGCGTCCA +
Preference number: 2 (lower is better)
Translates to: TVISRGKCPVKLKIL*WSTLQLPTARLLRP
Trigger: TGGACGCAGTAGCCTTGCTGTAGGGAGTTGAAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAATCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 90 bp TTCTTCTTCTCCTTCAGTTCATCCTCCACCTTGTCCATACGCTTCTaGTCCTTCTCGATCTCCTTGTTCTTTGAGGCCAGTTCCTTGTTG +
Preference number: 2 (lower is better)
Translates to: FFFSFSSSSTLSIRF*SFSISLFFEASSLL
Trigger: CAACAAGGAACTGGCCTCAAAGAACAAGGAGATCGAGAAGGACAAGAAGCGTATGGACAAGGTGGAGGATGAACTGAAGGAGAAGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
3UTR-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGTTCCTCTTCATGCTTaGTTAGCAGTGCCTAAATCC +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQVPLHA*LAVPKS
Trigger: GGATTTAGGCACTGCTAATCAAGCATGAAGAGGAAC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGGTCCTGAGTACCTTTaGCCAGCTCAGGGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQGPEYL*PAQGCC
Trigger: ACAGCACCCCTGAGCTGGGCAAAGGTACTCAGGACC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTTGGAAACACTGTGGTaGCCAGCCTCCCGTGAGCAT +
Preference number: 2 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLETLW*PASREH
Trigger: ATGCTCACGGGAGGCTGGGCACCACAGTGTTTCCAA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACTACAGCAAGGCTACTaGGTCCACAGTATAAGGGAG +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLQQGY*VHSIRE
Trigger: CTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATTCCTGTTGCCATGTTaGCACATGGTTCTGGCTACC +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLFLLPC*HMVLAT
Trigger: GGTAGCCAGAACCATGTGGCAACATGGCAACAGGAA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGCATTTGCCAAATTATaGCACACAGTACCACCAGTG +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQAFAKL*HTVPPV
Trigger: CACTGGTGGTACTGTGTGCCATAATTTGGCAAATGC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCACATCCTTTGGATGTaGGGGTGCAAGCAGGGAACT +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSHILWM*GCKQGT
Trigger: AGTTCCCTGCTTGCACCCCCACATCCAAAGGATGTG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGAGCTCCACATCCTTTaGATGTGGGGGTGCAAGCAG +
Preference number: 2 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLELHIL*MWGCKQ
Trigger: CTGCTTGCACCCCCACATCCAAAGGATGTGGAGCTC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACTCTTGGAAACACTGTaGTGCCCAGCCTCCCGTGAG +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQLLETL*CPASRE
Trigger: CTCACGGGAGGCTGGGCACCACAGTGTTTCCAAGAG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGATCCAGCTTGCTCTTaGAAACACTGTGGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSDPACS*KHCGAQ
Trigger: CTGGGCACCACAGTGTTTCCAAGAGCAAGCTGGATC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACTAGTGCAGGCCTCCTaGTCTTTTTCCAGTCTCCTA +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLVQAS*SFSSLL
Trigger: TAGGAGACTGGAAAAAGACCAGGAGGCCTGCACTAG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCAGGGAGTCAGAGTCCTaGCTTGGAAGAGCCTTACTG +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSRESES*LGRALL
Trigger: CAGTAAGGCTCTTCCAAGCCAGGACTCTGACTCCCT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATTGCTGTTTAGTTTCTaGCCACCCCTCATCCACCAC +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLLFSF*PPLIHH
Trigger: GTGGTGGATGAGGGGTGGCCAGAAACTAAACAGCAA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATGCCTTGCTGCTTCATaGCTTCTGCCACCCTGTGGC +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQCLAAS*LLPPCG
Trigger: GCCACAGGGTGGCAGAAGCCATGAAGCAGCAAGGCA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGTTCTGGCTACCTTGTaGTTCTTGCAGTCTCATCGC +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLVLATL*FLQSHR
Trigger: GCGATGAGACTGCAAGAACCACAAGGTAGCCAGAAC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATGCCATGTTGCCACATaGTTCTGGCTACCTTGTGGT +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLCHVAT*FWLPCG
Trigger: ACCACAAGGTAGCCAGAACCATGTGGCAACATGGCA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGACTCCTATGAGGTCCTaGGTACCTTTGCCCAGCTCA +
Preference number: 2 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKTPMRS*VPLPSS
Trigger: TGAGCTGGGCAAAGGTACTCAGGACCTCATAGGAGT...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGGTAGAGATCATGTCTaGTTCAACTCTGTATTCCAA +
Preference number: 2 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPGRDHV*FNSVFQ
Trigger: TTGGAATACAGAGTTGAATCAGACATGATCTCTACC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGAGTAGTGTAAGAAGCTaGTTAACAGGGAAGCTACAG +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQSSVRS*LTGKLQ
Trigger: CTGTAGCTTCCCTGTTAATCAGCTTCTTACACTACT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACTGTGGCCAGGATTGTaGGGTCACATGGTACAGAGC +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQLWPGL*GHMVQS
Trigger: GCTCTGTACCATGTGACCTCACAATCCTGGCCACAG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGCCACCCCTGTAAGGTaGAGTCCTTATGCCAGTCCA +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQATPVR*SPYASP
Trigger: TGGACTGGCATAAGGACTTCACCTTACAGGGGTGGC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTCGTTCAGGAATTTTTaGTCCAGACCTAACATCACC +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQSFRNF*SRPNIT
Trigger: GGTGATGTTAGGTCTGGAGCAAAAATTCCTGAACGA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATGCCCAGCTCAGGGGTaGTGTCATCCTAAGCTCTCT +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQCPAQG*CHPKLS
Trigger: AGAGAGCTTAGGATGACAGCACCCCTGAGCTGGGCA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATGCCCAGCTCAGGGGTaGTGTCATCCTAAGCTCTCT +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLCPAQG*CHPKLS
Trigger: AGAGAGCTTAGGATGACAGCACCCCTGAGCTGGGCA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTACTTTGGATGTGGGGGTaGAAGCAGGGAACTGCTGCT +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLLWMWG*KQGTAA
Trigger: AGCAGCAGTTCCCTGCTTGCACCCCCACATCCAAAG...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATTGGAAACACTGTGGTaGCCAGCCTCCCGTGAGCAT +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLLETLW*PASREH
Trigger: ATGCTCACGGGAGGCTGGGCACCACAGTGTTTCCAA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTCATGGCTCCCTCACTaGCTTCAAGCTATGGTTTCC +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSSWLPH*LQAMVS
Trigger: GGAAACCATAGCTTGAAGGCAGTGAGGGAGCCATGA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACTAATCTGTTTTCCATaGTGGTTGGCTAGCCAGCCA +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLICFP*WLASQP
Trigger: TGGCTGGCTAGCCAACCAGCATGGAAAACAGATTAG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAATTCCTACTGGCCTTTaGCCTAGTGCAGGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLIPTGL*PSAGLL
Trigger: CAGGAGGCCTGCACTAGGGCAAAGGCCAGTAGGAAT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGGGTTCAAACCTTTTTaGGCCTCAGTTTCCTTATCT +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQGFKPF*ASVSLS
Trigger: AGATAAGGAAACTGAGGCCCAAAAAGGTTTGAACCC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGACTGCCTTCAAGCTATaGTTTCCAAATCTGGCTGTA +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQTAFKL*FPNLAV
Trigger: TACAGCCAGATTTGGAAACCATAGCTTGAAGGCAGT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGTTTTCCATGCTGGTTaGCTAGCCAGCCAGAAACAG +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSVFHAG*LASQKQ
Trigger: CTGTTTCTGGCTGGCTAGCCAACCAGCATGGAAAAC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAAGCCTTACTGCACACTaGAGGTGCTTAGCCAAGATT +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLSLTAH*RCLAKI
Trigger: AATCTTGGCTAAGCACCTCCAGTGTGCAGTAAGGCT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 90 bp TTCCTGTTGCCATGTTGCCACATGGTTCTGGCTACCTTGTGGTTCTaGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAA +
Preference number: 2 (lower is better)
Translates to: FLLPCCHMVLATLWF*QSHRFYCLMILSIQ
Trigger: TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAAGGTAGCCAGAACCATGTGGCAACATGGCAACAGGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGTTCCTCTTCATGCTTaGTTAGCAGTGCCTAAATCC +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLVPLHA*LAVPKS
Trigger: GGATTTAGGCACTGCTAATCAAGCATGAAGAGGAAC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAACTCCTATGAGGTCCTaGGTACCTTTGCCCAGCTCA +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQTPMRS*VPLPSS
Trigger: TGAGCTGGGCAAAGGTACTCAGGACCTCATAGGAGT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTGCCTAAGACTCCTATaGGGTCCTGAGTACCTTTGC +
Preference number: 2 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLCLRLL*GPEYLC
Trigger: GCAAAGGTACTCAGGACCTCATAGGAGTCTTAGGCA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGGTAGAGATCATGTCTaGTTCAACTCTGTATTCCAA +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQGRDHV*FNSVFQ
Trigger: TTGGAATACAGAGTTGAATCAGACATGATCTCTACC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCCTCAAGAAAAATACTaGGTAAATAGTACAGGAGGG +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQPQEKY*VNSTGG
Trigger: CCCTCCTGTACTATTTACTCAGTATTTTTCTTGAGG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAAGGAATTCCAGTTGCTaGGGAGGATGTAAGCAGATT +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLRNSSC*GGCKQI
Trigger: AATCTGCTTACATCCTCCTCAGCAACTGGAATTCCT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGGTAGACCCCATCAGTaGCCTGAAACTTTCCCAGTC +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLGRPHQ*PETFPV
Trigger: GACTGGGAAAGTTTCAGGGCACTGATGGGGTCTACC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGATAAAGGCCAGCATTTaGCAAATTATGGCACACAGT +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQIKASI*QIMAHS
Trigger: ACTGTGTGCCATAATTTGGCAAATGCTGGCCTTTAT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTACTCGGATCCAGCTTaGTCTTGGAAACACTGTGGT +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSYSDPA*SWKHCG
Trigger: ACCACAGTGTTTCCAAGAGCAAGCTGGATCCGAGTA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACCATTGTTGCCTTGCTaGTTCATGGCTTCTGCCACC +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQPLLPC*FMASAT
Trigger: GGTGGCAGAAGCCATGAAGCAGCAAGGCAACAATGG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACTACCTTGTGGTTCTTaGAGTCTCATCGCTTCTACT +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLPCGS*SLIAST
Trigger: AGTAGAAGCGATGAGACTGCAAGAACCACAAGGTAG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTCTGTCCCTAATAGCTaGGATCAGAAGCTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLSVPNS*DQKLSG
Trigger: CCCTGAGAGCTTCTGATCCCAGCTATTAGGGACAGA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAATGACTTGGAAGACCTaGGTTCAAACCTTTTTGGGC +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLMTWKT*VQTFLG
Trigger: GCCCAAAAAGGTTTGAACCCAGGTCTTCCAAGTCAT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGATCCAGCTTGCTCTTaGAAACACTGTGGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLDPACS*KHCGAQ
Trigger: CTGGGCACCACAGTGTTTCCAAGAGCAAGCTGGATC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTTAAAAACCATTTCATaGCTCCCTCACTGCCTTCAA +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQLKTIS*LPHCLQ
Trigger: TTGAAGGCAGTGAGGGAGCCATGAAATGGTTTTTAA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGAGTTCACATCTGATCTaGAGTCCCCCTATTAAAAAC +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQSSHLI*SPPIKN
Trigger: GTTTTTAATAGGGGGACTCCAGATCAGATGTGAACT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCATCTGTTTTCCATGCTaGTTGGCTAGCCAGCCAGAA +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSICFPC*LASQPE
Trigger: TTCTGGCTGGCTAGCCAACCAGCATGGAAAACAGAT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTCGCTCTCTCACAAATaGATTCACTCATGCATTCAT +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQSLSHK*IHSCIH
Trigger: ATGAATGCATGAGTGAATCCATTTGTGAGAGAGCGA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGAACTATAGTCATTCATaGACCCACTGTATCTCCTTA +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQNYSHS*THCISL
Trigger: TAAGGAGATACAGTGGGTTCATGAATGACTATAGTT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGCACAGAAGGTCAAATaGCTTGCCCAAGGTCAAACA +
Preference number: 2 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLAQKVK*LAQGQT
Trigger: TGTTTGACCTTGGGCAAGTCATTTGACCTTCTGTGC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGAGAAAGCACTTGAATaGCTTGGAAGACCTGGGTTC +
Preference number: 2 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLEKALE*LGRPGF
Trigger: GAACCCAGGTCTTCCAAGTCATTCAAGTGCTTTCTC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATGCTCCTGTCAGTGTTaGTCACACTGTATGGTTAAT +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLCSCQC*SHCMVN
Trigger: ATTAACCATACAGTGTGATCAACACTGACAGGAGCA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCGGGCACATACAGCATaGACATCTAACCTAATCTGT +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSRAHTA*TSNLIC
Trigger: ACAGATTAGGTTAGATGTTCATGCTGTATGTGCCCG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAATTGAACTGGATGAATaGATCAATGGCTTGTGGAGG +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLIELDE*INGLWR
Trigger: CCTCCACAAGCCATTGATTCATTCATCCAGTTCAAT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGGTAGACCCCATCAGTaGCCTGAAACTTTCCCAGTC +
Preference number: 2 (lower is better)
Translates to: FMSSCILFPISGNSFYFLGRPHQ*PETFPV
Trigger: GACTGGGAAAGTTTCAGGGCACTGATGGGGTCTACC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACTGGGTTATTATCCATaGTGGCTGAATCAGATTTCC +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLGYYP*WLNQIS
Trigger: GGAAATCTGATTCAGCCAGCATGGATAATAACCCAG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTGTTTTGCTGTTTCTTaGCTTCATGTCTTCATGCAT +
Preference number: 2 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQCFAVS*LHVFMH
Trigger: ATGCATGAAGACATGAAGGCAAGAAACAGCAAAACA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATGTGTGATGAACAGATaGCCCTGTTCAGCTCAGCAC +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLCVMNR*PCSAQH
Trigger: GTGCTGAGCTGAACAGGGCCATCTGTTCATCACACA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATCTGTCCCTAATAGCTaGGATCAGAAGCTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQSVPNS*DQKLSG
Trigger: CCCTGAGAGCTTCTGATCCCAGCTATTAGGGACAGA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGCATTTGCCAAATTATaGCACACAGTACCACCAGTG +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSAFAKL*HTVPPV
Trigger: CACTGGTGGTACTGTGTGCCATAATTTGGCAAATGC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCTAAATAGATCCGAGTaGAAGTCTAGGCTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLNRSE*KSRLCH
Trigger: GTGGCAGAGCCTAGACTTCCACTCGGATCTATTTAG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGACCCTCTTCCAATCTaGTTCCTCTCTACCTTTTCT +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSDPLPI*FLSTFS
Trigger: AGAAAAGGTAGAGAGGAACCAGATTGGAAGAGGGTC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGTTCCTCTTCATGCTTaGTTAGCAGTGCCTAAATCC +
Preference number: 2 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLVPLHA*LAVPKS
Trigger: GGATTTAGGCACTGCTAATCAAGCATGAAGAGGAAC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAACACAAATGAGTGAATaGAGGCAGTTTCAGGTAACT +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLTQMSE*RQFQVT
Trigger: AGTTACCTGAAACTGCCTTCATTCACTCATTTGTGT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGGAGAACAGCAAAGGTaGCCTTTAAAGGGCTGTGAA +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQGEQQR*PLKGCE
Trigger: TTCACAGCCCTTTAAAGGTCACCTTTGCTGTTCTCC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTGCTCCTGTCAGTGTTaGTCACACTGTATGGTTAAT +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSCSCQC*SHCMVN
Trigger: ATTAACCATACAGTGTGATCAACACTGACAGGAGCA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAAAGTTAATTCCCCTCTaGGGACCTCAGAAGGGGTTT +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLKLIPL*GPQKGF
Trigger: AAACCCCTTCTGAGGTCCTCAGAGGGGAATTAACTT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACACCCTGTGGCTCCGTaGTCTCATTATACAAATGTC +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQHPVAP*SHYTNV
Trigger: GACATTTGTATAATGAGATCACGGAGCCACAGGGTG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGCTTCTACTGTCTCATaGTCTTATCTATTCAAGCCT +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLASTVS*SYLFKP
Trigger: AGGCTTGAATAGATAAGATCATGAGACAGTAGAAGC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATACTCGGATCCAGCTTaGTCTTGGAAACACTGTGGT +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLYSDPA*SWKHCG
Trigger: ACCACAGTGTTTCCAAGAGCAAGCTGGATCCGAGTA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATCTATTCAAGCCTTCTaGTGCTTTGTGGATCTCATA +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLSIQAF*CFVDLI
Trigger: TATGAGATCCACAAAGCAGCAGAAGGCTTGAATAGA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCATCCTAAGCTCTCTTaGAATCAAATTCAGCCTAGG +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSHPKLS*NQIQPR
Trigger: CCTAGGCTGAATTTGATTCCAAGAGAGCTTAGGATG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACTTAAGATACTGTTGTaGAGTACTCTTCAACTCCCT +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLKILL*STLQLP
Trigger: AGGGAGTTGAAGAGTACTCCACAACAGTATCTTAAG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGGTATACAGCCAGTTTaGGAACCACACTGTCCTACA +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLGIQPV*EPHCPT
Trigger: TGTAGGACAGTGTGGTTCCCAAACTGGCTGTATACC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAAGCCTTACTGCACACTaGAGGTGCTTAGCCAAGATT +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSLTAH*RCLAKI
Trigger: AATCTTGGCTAAGCACCTCCAGTGTGCAGTAAGGCT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTACCTAGCTTCCATTTCTaGCTCCAACACTTCCTAGCA +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLPSFHF*LQHFLA
Trigger: TGCTAGGAAGTGTTGGAGCCAGAAATGGAAGCTAGG...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAAGGGGGCAGTGTAATTaGCAACCATCTTGTTTGACC +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLRGQCN*QPSCLT
Trigger: GGTCAAACAAGATGGTTGCCAATTACACTGCCCCCT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCCACTCCTAGTGCCTaGCCAAATCCTACCAATTTG +
Preference number: 2 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSTPSA*PNPTNL
Trigger: CAAATTGGTAGGATTTGGTCAGGCACTAGGAGTGGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCCTCAAGAAAAATACTaGGTAAATAGTACAGGAGGG +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSPQEKY*VNSTGG
Trigger: CCCTCCTGTACTATTTACTCAGTATTTTTCTTGAGG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTACTTCCCTTACAAGTCTaGCATTCTGGGTATCTCACT +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLLPLQV*HSGYLT
Trigger: AGTGAGATACCCAGAATGTCAGACTTGTAAGGGAAG...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGGCAACCATCTTGTTTaGCCTGTCCAATACATTGAC +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLGNHLV*PVQYID
Trigger: GTCAATGTATTGGACAGGTCAAACAAGATGGTTGCC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACACATTCTGCCTCCCTaGAAGATCTGGTTGTTTCAT +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQHILPP*KIWLFH
Trigger: ATGAAACAACCAGATCTTTCAGGGAGGCAGAATGTG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATATACAAATGTCTCATaGCCTCTGCTTACTTATGGT +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLYTNVS*PLLTYG
Trigger: ACCATAAGTAAGCAGAGGTCATGAGACATTTGTATA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTCGTTCAGGAATTTTTaGTCCAGACCTAACATCACC +
Preference number: 2 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLSFRNF*SRPNIT
Trigger: GGTGATGTTAGGTCTGGAGCAAAAATTCCTGAACGA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCATAAAGGCCAGCATTTaGCAAATTATGGCACACAGT +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSIKASI*QIMAHS
Trigger: ACTGTGTGCCATAATTTGGCAAATGCTGGCCTTTAT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCTGGGTTATTATCCATaGTGGCTGAATCAGATTTCC +
Preference number: 2 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLGYYP*WLNQIS
Trigger: GGAAATCTGATTCAGCCAGCATGGATAATAACCCAG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATTGCCATTTGATACATaGCACCCCTGTAAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQLPFDT*HPCKVK
Trigger: CTTCACCTTACAGGGGTGGCATGTATCAAATGGCAA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATGGCTGTTTTACAAATaGTTTCCCCAACTAAACAGT +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLWLFYK*FPQLNS
Trigger: ACTGTTTAGTTGGGGAAACCATTTGTAAAACAGCCA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTCGCTCTCTCACAAATaGATTCACTCATGCATTCAT +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSSLSHK*IHSCIH
Trigger: ATGAATGCATGAGTGAATCCATTTGTGAGAGAGCGA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAAAGGAAAGAGATGACTaGGACAGGGTAGGAATCATG +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLKERDD*DRVGIM
Trigger: CATGATTCCTACCCTGTCCCAGTCATCTCTTTCCTT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGGCAGGATAAAGATTTaGCTCATCTTTGTGTTCCTG +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQGRIKI*LIFVFL
Trigger: CAGGAACACAAAGATGAGTCAAATCTTTATCCTGCC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAAGTAGTGTAAGAAGCTaGTTAACAGGGAAGCTACAG +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQSSVRS*LTGKLQ
Trigger: CTGTAGCTTCCCTGTTAATCAGCTTCTTACACTACT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATCGTTCAGGAATTTTTaGTCCAGACCTAACATCACC +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSFRNF*SRPNIT
Trigger: GGTGATGTTAGGTCTGGAGCAAAAATTCCTGAACGA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGCCTTCATGTCTTCATaGATACTGTTTCCAATATCT +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSAFMSS*ILFPIS
Trigger: AGATATTGGAAACAGTATGCATGAAGACATGAAGGC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACTTCAGTATTTGTTTTaGTGTTTCTTGCCTTCATGT +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLQYLF*CFLPSC
Trigger: ACATGAAGGCAAGAAACAGCAAAACAAATACTGAAG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCACACAGTACCACCAGTaGTACGTGACTTCTTTGGTT +
Preference number: 2 (lower is better)
Translates to: FMSSCILFPISGNSFYFLTQYHQ*YVTSLV
Trigger: AACCAAAGAAGTCACGTACCACTGGTGGTACTGTGT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGCATTTGCCAAATTATaGCACACAGTACCACCAGTG +
Preference number: 2 (lower is better)
Translates to: FMSSCILFPISGNSFYFLAFAKL*HTVPPV
Trigger: CACTGGTGGTACTGTGTGCCATAATTTGGCAAATGC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCATGACTTGGAAGACCTaGGTTCAAACCTTTTTGGGC +
Preference number: 2 (lower is better)
Translates to: FMSSCILFPISGNSFYFLMTWKT*VQTFLG
Trigger: GCCCAAAAAGGTTTGAACCCAGGTCTTCCAAGTCAT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGTTGATCACACTGTATaGTTAATGGCTGTTTTACAA +
Preference number: 2 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLVDHTV*LMAVLQ
Trigger: TTGTAAAACAGCCATTAACCATACAGTGTGATCAAC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAACTGCCTTCAAGCTATaGTTTCCAAATCTGGCTGTA +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLTAFKL*FPNLAV
Trigger: TACAGCCAGATTTGGAAACCATAGCTTGAAGGCAGT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCATTCAAAAACTTTACTaGGTGCCTGTTTTGTGTCAG +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSIQKLY*VPVLCQ
Trigger: CTGACACAAAACAGGCACCCAGTAAAGTTTTTGAAT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCAATCATGGCTATTCATaGGTACTCATTCTATCCTCT +
Preference number: 2 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSNHGYS*VLILSS
Trigger: AGAGGATAGAATGAGTACCCATGAATAGCCATGATT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 90 bp TCTTCCCTTACAAGTCTGACATTCTGGGTATCTCACTATAAGTTATaGTATAAGAGATGTGACTCTTACCTGGGAAAGCCCTCAAAAACA +
Preference number: 2 (lower is better)
Translates to: SSLTSLTFWVSHYKL*YKRCDSYLGKPSKT
Trigger: TGTTTTTGAGGGCTTTCCCAGGTAAGAGTCACATCTCTTATACAATAACTTATAGTGAGATACCCAGAATGTCAGACTTGTAAGGGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAACACAAATGAGTGAATaGAGGCAGTTTCAGGTAACT +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLTQMSE*RQFQVT
Trigger: AGTTACCTGAAACTGCCTTCATTCACTCATTTGTGT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGGTAGAGATCATGTCTaGTTCAACTCTGTATTCCAA +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLGRDHV*FNSVFQ
Trigger: TTGGAATACAGAGTTGAATCAGACATGATCTCTACC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACACACATCAAACCTGTaGTTTCACAGATATCACTAC +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQHTSNL*FHRYHY
Trigger: GTAGTGATATCTGTGAAATCACAGGTTTGATGTGTG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTACCCCAGGAATCTTCATaGTTCAGTATTTGTTTTGCT +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLPQESS*FSICFA
Trigger: AGCAAAACAAATACTGAAGCATGAAGATTCCTGGGG...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCCATCCTAAGCTCTCTTaGAATCAAATTCAGCCTAGG +
Preference number: 2 (lower is better)
Translates to: FMSSCILFPISGNSFYFLHPKLS*NQIQPR
Trigger: CCTAGGCTGAATTTGATTCCAAGAGAGCTTAGGATG...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATCAGATTTCCAGAGGTaGGACCAGAGCAATTTATTT +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSDFQR*DQSNLF
Trigger: AAATAAATTGCTCTGGTCCCACCTCTGGAAATCTGA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACTTAAGATACTGTTGTaGAGTACTCTTCAACTCCCT +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQLKILL*STLQLP
Trigger: AGGGAGTTGAAGAGTACTCCACAACAGTATCTTAAG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAACCTCTGCTTACTTATaGTTTCTGCAGCTTTCTCTT +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQTSAYL*FLQLSL
Trigger: AAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAAACTATAGTCATTCATaGACCCACTGTATCTCCTTA +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLNYSHS*THCISL
Trigger: TAAGGAGATACAGTGGGTTCATGAATGACTATAGTT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATGTTTTGCTGTTTCTTaGCTTCATGTCTTCATGCAT +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQCFAVS*LHVFMH
Trigger: ATGCATGAAGACATGAAGGCAAGAAACAGCAAAACA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCAGATTTCCAGAGGTaGGACCAGAGCAATTTATTT +
Preference number: 2 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSDFQR*DQSNLF
Trigger: AAATAAATTGCTCTGGTCCCACCTCTGGAAATCTGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATGGCTGTTTTACAAATaGTTTCCCCAACTAAACAGT +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLWLFYK*FPQLNS
Trigger: ACTGTTTAGTTGGGGAAACCATTTGTAAAACAGCCA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAATTCAAAAACTTTACTaGGTGCCTGTTTTGTGTCAG +
Preference number: 2 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLIQKLY*VPVLCQ
Trigger: CTGACACAAAACAGGCACCCAGTAAAGTTTTTGAAT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAAATCATGGCTATTCATaGGTACTCATTCTATCCTCT +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQNHGYS*VLILSS
Trigger: AGAGGATAGAATGAGTACCCATGAATAGCCATGATT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCATTTCCAGAGGGAAGTaGCCAGTTAAACTTAAGATA +
Preference number: 2 (lower is better)
Translates to: FMSSCILFPISGNSFYFLISRGK*PVKLKI
Trigger: TATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGTTGATCACACTGTATaGTTAATGGCTGTTTTACAA +
Preference number: 2 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQVDHTV*LMAVLQ
Trigger: TTGTAAAACAGCCATTAACCATACAGTGTGATCAAC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 72 bp TGCCCAGCCTCCCGTGAGCATAGCCTTGACAACGGTTaGCCTGTGATGCCAGGAGGTGGTGGGGCACGACAG +
Preference number: 3 (lower is better)
Translates to: CPASREHSLDNG*PVMPGGGGARQ
Trigger: CTGTCGTGCCCCACCACCTCCTGGCATCACAGGGCAACCGTTGTCAAGGCTATGCTCACGGGAGGCTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR TCA 72 bp CCTCCCGTGAGCATAGCCTTGACAACGGTTGCCCTGTaGTGCCAGGAGGTGGTGGGGCACGACAGGAGAGAG +
Preference number: 3 (lower is better)
Translates to: PPVSIALTTVAL*CQEVVGHDRRE
Trigger: CTCTCTCCTGTCGTGCCCCACCACCTCCTGGCATCACAGGGCAACCGTTGTCAAGGCTATGCTCACGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 72 bp CCTCAGGCCCTCCGCTTACCAGGTAGACCCCATCAGTaGCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGC +
Preference number: 3 (lower is better)
Translates to: PQALRLPGRPHQ*PETFPVSRAFS
Trigger: GCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGCACTGATGGGGTCTACCTGGTAAGCGGAGGGCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 72 bp CTACTCGGATCCAGCTTGCTCTTGGAAACACTGTGGTaGCCAGCCTCCCGTGAGCATAGCCTTGACAACGGT +
Preference number: 3 (lower is better)
Translates to: LLGSSLLLETLW*PASREHSLDNG
Trigger: ACCGTTGTCAAGGCTATGCTCACGGGAGGCTGGGCACCACAGTGTTTCCAAGAGCAAGCTGGATCCGAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 72 bp GATGCTAGCCCATGGCTTTTTCTGCCTCATGGGTCCTaGAGCTTCATGGCTCCCGGCGCTTCAGTTCCTATT +
Preference number: 3 (lower is better)
Translates to: DASPWLFLPHGS*SFMAPGASVPI
Trigger: AATAGGAACTGAAGCGCCGGGAGCCATGAAGCTGCAGGACCCATGAGGCAGAAAAAGCCATGGGCTAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 72 bp TTTAGGGGCCGGGGCCCAGAATGCCGTACCTGTTTGTaGTATACAGCCAGTTTGGGAACCACACTGTCCTAC +
Preference number: 3 (lower is better)
Translates to: FRGRGPECRTCL*YTASLGTTLSY
Trigger: GTAGGACAGTGTGGTTCCCAAACTGGCTGTATACCACAAACAGGTACGGCATTCTGGGCCCCGGCCCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 72 bp AATCTACTCGGATCCAGCTTGCTCTTGGAAACACTGTaGTGCCCAGCCTCCCGTGAGCATAGCCTTGACAAC +
Preference number: 3 (lower is better)
Translates to: NLLGSSLLLETL*CPASREHSLDN
Trigger: GTTGTCAAGGCTATGCTCACGGGAGGCTGGGCACCACAGTGTTTCCAAGAGCAAGCTGGATCCGAGTAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 72 bp CATGGCTTTTTCTGCCTCATGGGTCCTGCAGCTTCATaGCTCCCGGCGCTTCAGTTCCTATTAATCCATGGC +
Preference number: 3 (lower is better)
Translates to: HGFFCLMGPAAS*LPALQFLLIHG
Trigger: GCCATGGATTAATAGGAACTGAAGCGCCGGGAGCCATGAAGCTGCAGGACCCATGAGGCAGAAAAAGCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGAGAGCTCCACATCCTTaGGATGTGGGGGTGCAAGCA +
Preference number: 3 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQRAPHP*DVGVQA
Trigger: TGCTTGCACCCCCACATCCAAAGGATGTGGAGCTCT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCACTACTCGGATCCAGCTaGCTCTTGGAAACACTGTGG +
Preference number: 3 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPLLGSS*LLETLW
Trigger: CCACAGTGTTTCCAAGAGCAAGCTGGATCCGAGTAG...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp TTCTCCTTGATCTCCTTCTCAATCTGCTGCTGCTCCCGCATCATTTTGCCCAGCTCCTTCTCGATCTCCTaGTTCTTTGAGGCCAGTTCC +
Preference number: 3 (lower is better)
Translates to: FSLISFSICCCSRIILPSSFSIS*FFEASS
Trigger: GGAACTGGCCTCAAAGAACAAGGAGATCGAGAAGGA...GCTGGGCAAAATGATGCGGGAGCAGCAGCAGATTGAGAAGGAGATCAAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463684.1
3UTR GCA 72 bp ACCCCCGAATTGTGCTCGTCCATAAAGGCCAGCATTTaGCAAATTATGGCACACAGTACCACCAGTGGTACG +
Preference number: 3 (lower is better)
Translates to: TPELCSSIKASI*QIMAHSTTSGT
Trigger: CGTACCACTGGTGGTACTGTGTGCCATAATTTGGCAAATGCTGGCCTTTATGGACGAGCACAATTCGGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 72 bp ATACATACATACACACATACATACCCACACACACAGTaGGCAAGAGGCCCAAGGGGCCCACGATTATGGGTG +
Preference number: 3 (lower is better)
Translates to: IHTYTHTYPHTQ*ARGPRGPRLWV
Trigger: CACCCATAATCGTGGGCCCCTTGGGCCTCTTGCCCACTGTGTGTGTGGGTATGTATGTGTGTATGTATGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp TTCTCCTTCAGTTCATCCTCCACCTTGTCCATACGCTTCTTGTCCTTCTCGATCCTTCTTTCTCCTGCTTaGCTTCCTTGCGTTCAGCCG +
Preference number: 3 (lower is better)
Translates to: FSFSSSSTLSIRFLSFSILLSPA*LPCVQP
Trigger: CGGCTGAACGCAAGGAAGCAAAGCAGGAGAAAGAAG...GATCGAGAAGGACAAGAAGCGTATGGACAAGGTGGAGGATGAACTGAAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
3UTR CCA 72 bp GAAGTTAATTCCCCTCTGAGGACCTCAGAAGGGGTTTaGGCAGTCTTCCCTTACAAGTCTGACATTCTGGGT +
Preference number: 3 (lower is better)
Translates to: EVNSPLRTSEGV*AVFPYKSDILG
Trigger: ACCCAGAATGTCAGACTTGTAAGGGAAGACTGCCCAAACCCCTTCTGAGGTCCTCAGAGGGGAATTAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 72 bp TGTGGCCAGGATTGTGAGGTCACATGGTACAGAGCATaGCAACTTATGCTAAGGAAACCCCTTAGAAGGGAC +
Preference number: 3 (lower is better)
Translates to: CGQDCEVTWYRA*QLMLRKPLRRD
Trigger: GTCCCTTCTAAGGGGTTTCCTTAGCATAAGTTGCCATGCTCTGTACCATGTGACCTCACAATCCTGGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 72 bp CTGTTGCCATGTTGCCACATGGTTCTGGCTACCTTGTaGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATG +
Preference number: 3 (lower is better)
Translates to: LLPCCHMVLATL*FLQSHRFYCLM
Trigger: CATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAAGGTAGCCAGAACCATGTGGCAACATGGCAACAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCATCAAATATCCAGAGATaGGGAGAGGGACAGCTTAGG +
Preference number: 3 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPSNIQR*GEGQLR
Trigger: CCTAAGCTGTCCCTCTCCCAATCTCTGGATATTTGA...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATCCCCAGGCCCACCCTaGTGGTGCCTAAAGCTTATT +
Preference number: 3 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLSPGPP*WCLKLI
Trigger: AATAAGCTTTAGGCACCACAAGGGTGGGCCTGGGGA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp GGCCGCTTCTGGTTCAATTCTGAGTCCTTCTCCTTGATCTCCTTCTCAATCTGCTCCTGCTTTGCTTCCTaGCGTTCAGCCGCAATATTT +
Preference number: 3 (lower is better)
Translates to: GRFWFNSESFSLISFSICSCFAS*RSAAIF
Trigger: AAATATTGCGGCTGAACGCAAGGAAGCAAAGCAGGA...GCAGATTGAGAAGGAGATCAAGGAGAAGGACTCAGAATTGAACCAGAAGCGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
3UTR-3UTR CAA 90 bp TTCTCCTTGATCTCCTTCTCAATCTGCTGCTGCTCCCGCATCATTTTGCCCAGCTTTGAGGCCAGTTCCTaGTTGAGCTTCTCAATTTCC +
Preference number: 3 (lower is better)
Translates to: FSLISFSICCCSRIILPSFEASS*LSFSIS
Trigger: GGAAATTGAGAAGCTCAACAAGGAACTGGCCTCAAA...GCTGGGCAAAATGATGCGGGAGCAGCAGCAGATTGAGAAGGAGATCAAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463684.1
3UTR TCA 72 bp TACATTTGCCATTTGATACATGCCACCCCTGTAAGGTaGAGTCCTTATGCCAGTCCAGCTAACAGGCCACTG +
Preference number: 3 (lower is better)
Translates to: YICHLIHATPVR*SPYASPANRPL
Trigger: CAGTGGCCTGTTAGCTGGACTGGCATAAGGACTTCACCTTACAGGGGTGGCATGTATCAAATGGCAAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR TCA 72 bp ATTTTGTGGGAGGTGTTCTCCTTGGCTTTGATGTACTaGGGCCGCTTCTGGTTCAATTCTGAGTCCTTCTCC +
Preference number: 3 (lower is better)
Translates to: ILWEVFSLALMY*GRFWFNSESFS
Trigger: GGAGAAGGACTCAGAATTGAACCAGAAGCGGCCTCAGTACATCAAAGCCAAGGAGAACACCTCCCACAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463684.1
3UTR CCA 72 bp GAGGTAGGGGTTAGTTATCTGGGTTATTATCCATGCTaGCTGAATCAGATTTCCAGAGGTGGGACCAGAGCA +
Preference number: 3 (lower is better)
Translates to: EVGVSYLGYYPC*LNQISRGGTRA
Trigger: TGCTCTGGTCCCACCTCTGGAAATCTGATTCAGCCAGCATGGATAATAACCCAGATAACTAACCCCTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCCAAATCCTACCAATTaGTCAAGGTCTAGCTTAAAT +
Preference number: 3 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGPNPTN*SRSSLN
Trigger: ATTTAAGCTAGACCTTGACAAATTGGTAGGATTTGG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGCAAGCATGGCAGGTTaGCTAAGGGTTTCCAGAAGG +
Preference number: 3 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLASMAG*LRVSRR
Trigger: CCTTCTGGAAACCCTTAGCAAACCTGCCATGCTTGC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGAGGTAGGGGGAAGGTaGGGAGTCAAATATCCAGAG +
Preference number: 3 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSEVGGR*GVKYPE
Trigger: CTCTGGATATTTGACTCCCAACCTTCCCCCTACCTC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCCTCCAGTGAGGAGCTaGACATCATTAAATCCTATG +
Preference number: 3 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQPPVRS*TSLNPM
Trigger: CATAGGATTTAATGATGTCAAGCTCCTCACTGGAGG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTGGGTTCAAACCTTTTaGGGCCTCAGTTTCCTTATC +
Preference number: 3 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQWVQTF*GLSFLI
Trigger: GATAAGGAAACTGAGGCCCAAAAAGGTTTGAACCCA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTAGAGCTCCACATCCTTaGGATGTGGGGGTGCAAGCA +
Preference number: 3 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLRAPHP*DVGVQA
Trigger: TGCTTGCACCCCCACATCCAAAGGATGTGGAGCTCT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp TTCTTTCTCCTGCTTTGCTTCCTTGCGTTCAGCCGCAATATTTTTCTTGCGATGATTTCCTTCTTTCGCTaGTCATACTCCTGCGCCAGC +
Preference number: 3 (lower is better)
Translates to: FFLLLCFLAFSRNIFLAMISFFR*SYSCAS
Trigger: GCTGGCGCAGGAGTATGACAAGCGAAAGAAGGAAAT...CATCGCAAGAAAAATATTGCGGCTGAACGCAAGGAAGCAAAGCAGGAGAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463684.1
3UTR TCA 72 bp CCAGAAGGGGGCAGTGTAATTGGCAACCATCTTGTTTaGCCTGTCCAATACATTGACCTTCAAGGTTCAACC +
Preference number: 3 (lower is better)
Translates to: PEGGSVIGNHLV*PVQYIDLQGST
Trigger: GGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGTTGCCAATTACACTGCCCCCTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 72 bp CAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTaGTCCAGACCTAACATCACCTCTGTTCCTCTTCAT +
Preference number: 3 (lower is better)
Translates to: QRPEYSLSFRNF*SRPNITSVPLH
Trigger: ATGAAGAGGAACAGAGGTGATGTTAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 72 bp CAGCTAGAATTTGAACCAGGTCTGACCCCCGAATTGTaGTCGTCCATAAAGGCCAGCATTTGCCAAATTATG +
Preference number: 3 (lower is better)
Translates to: QLEFEPGLTPEL*SSIKASICQIM
Trigger: CATAATTTGGCAAATGCTGGCCTTTATGGACGAGCACAATTCGGGGGTCAGACCTGGTTCAAATTCTAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 72 bp TGTGAGGTAGGGGTTAGTTATCTGGGTTATTATCCATaGTGGCTGAATCAGATTTCCAGAGGTGGGACCAGA +
Preference number: 3 (lower is better)
Translates to: CEVGVSYLGYYP*WLNQISRGGTR
Trigger: TCTGGTCCCACCTCTGGAAATCTGATTCAGCCAGCATGGATAATAACCCAGATAACTAACCCCTACCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 72 bp GCTCCCTCACTGCCTTCAAGCTATGGTTTCCAAATCTaGCTGTACCCTAGTCATGTGGTAACCTTTATAAGC +
Preference number: 3 (lower is better)
Translates to: APSLPSSYGFQI*LYPSHVVTFIS
Trigger: GCTTATAAAGGTTACCACATGACTAGGGTACAGCCAGATTTGGAAACCATAGCTTGAAGGCAGTGAGGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGAGGTAGGGGGAAGGTaGGGAGTCAAATATCCAGAG +
Preference number: 3 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLEVGGR*GVKYPE
Trigger: CTCTGGATATTTGACTCCCAACCTTCCCCCTACCTC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR TCA 72 bp TTGATAACCACCTGTACAGTGGAGAAAGCACTTGAATaGCTTGGAAGACCTGGGTTCAAACCTTTTTGGGCC +
Preference number: 3 (lower is better)
Translates to: LITTCTVEKALE*LGRPGFKPFWA
Trigger: GGCCCAAAAAGGTTTGAACCCAGGTCTTCCAAGTCATTCAAGTGCTTTCTCCACTGTACAGGTGGTTATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCCAAATCCTACCAATTaGTCAAGGTCTAGCTTAAAT +
Preference number: 3 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFPNPTN*SRSSLN
Trigger: ATTTAAGCTAGACCTTGACAAATTGGTAGGATTTGG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTACAGCACCTTCCAGATTaGGAGGCTTCTTCTGTCCCT +
Preference number: 3 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLQHLPD*EASSVP
Trigger: AGGGACAGAAGAAGCCTCCAAATCTGGAAGGTGCTG...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGAGGCAGGATAAAGATTaGACTCATCTTTGTGTTCCT +
Preference number: 3 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQRQDKD*THLCVP
Trigger: AGGAACACAAAGATGAGTCAAATCTTTATCCTGCCT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAAGTCAGAGTCCTGGCTaGGAAGAGCCTTACTGCACA +
Preference number: 3 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSQSPG*EEPYCT
Trigger: TGTGCAGTAAGGCTCTTCCAAGCCAGGACTCTGACT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR TCA 72 bp TGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATaGTCTTATCTATTCAAGCCTTCTGCTGCTTTGTGG +
Preference number: 3 (lower is better)
Translates to: CGSCSLIASTVS*SYLFKPSAALW
Trigger: CCACAAAGCAGCAGAAGGCTTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTCAAATATCCAGAGATaGGGAGAGGGACAGCTTAGG +
Preference number: 3 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLSNIQR*GEGQLR
Trigger: CCTAAGCTGTCCCTCTCCCAATCTCTGGATATTTGA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGAGGTAGGGGGAAGGTaGGGAGTCAAATATCCAGAG +
Preference number: 3 (lower is better)
Translates to: FMSSCILFPISGNSFYFLEVGGR*GVKYPE
Trigger: CTCTGGATATTTGACTCCCAACCTTCCCCCTACCTC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCCAAATCCTACCAATTaGTCAAGGTCTAGCTTAAAT +
Preference number: 3 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQPNPTN*SRSSLN
Trigger: ATTTAAGCTAGACCTTGACAAATTGGTAGGATTTGG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAAGAAGGTCAAATGACTaGCCCAAGGTCAAACAACTA +
Preference number: 3 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLRRSND*PKVKQL
Trigger: TAGTTGTTTGACCTTGGGCAAGTCATTTGACCTTCT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTGGTACGTGACTTCTTaGGTTGAAAACAGACAAATT +
Preference number: 3 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQWYVTS*VENRQI
Trigger: AATTTGTCTGTTTTCAACCAAAGAAGTCACGTACCA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCAAGCACTTGAATGACTaGGAAGACCTGGGTTCAAAC +
Preference number: 3 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSKHLND*EDLGSN
Trigger: GTTTGAACCCAGGTCTTCCAAGTCATTCAAGTGCTT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCAGTGGAGAAAGCACTaGAATGACTTGGAAGACCTG +
Preference number: 3 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLQWRKH*NDLEDL
Trigger: CAGGTCTTCCAAGTCATTCAAGTGCTTTCTCCACTG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGAAACTTAAGATACTGTaGTGGAGTACTCTTCAACTC +
Preference number: 3 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQKLKIL*WSTLQL
Trigger: GAGTTGAAGAGTACTCCACAACAGTATCTTAAGTTT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATGTTTTCCATGCTGGTaGGCTAGCCAGCCAGAAACA +
Preference number: 3 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQCFPCW*ASQPET
Trigger: TGTTTCTGGCTGGCTAGCCAACCAGCATGGAAAACA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATGTTTTCCATGCTGGTaGGCTAGCCAGCCAGAAACA +
Preference number: 3 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLCFPCW*ASQPET
Trigger: TGTTTCTGGCTGGCTAGCCAACCAGCATGGAAAACA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATCATACATTTGCCATTaGATACATGCCACCCCTGTA +
Preference number: 3 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLSYICH*IHATPV
Trigger: TACAGGGGTGGCATGTATCAAATGGCAAATGTATGA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR TCA 72 bp AAGGTTGATAACCACCTGTACAGTGGAGAAAGCACTTaGATGACTTGGAAGACCTGGGTTCAAACCTTTTTG +
Preference number: 3 (lower is better)
Translates to: KVDNHLYSGEST*MTWKTWVQTFL
Trigger: CAAAAAGGTTTGAACCCAGGTCTTCCAAGTCATTCAAGTGCTTTCTCCACTGTACAGGTGGTTATCAACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAAGGCAGGATAAAGATTaGACTCATCTTTGTGTTCCT +
Preference number: 3 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLRQDKD*THLCVP
Trigger: AGGAACACAAAGATGAGTCAAATCTTTATCCTGCCT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATTGTTTTGCTGTTTCTaGCCTTCATGTCTTCATGCA +
Preference number: 3 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLFCCF*PSCLHA
Trigger: TGCATGAAGACATGAAGGCAAGAAACAGCAAAACAA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGAATGCCGTACCTGTTaGTGGTATACAGCCAGTTTG +
Preference number: 3 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLECRTC*WYTASL
Trigger: CAAACTGGCTGTATACCACAAACAGGTACGGCATTC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR TCA 72 bp CTCAGAAGGGGTTTGGGCAGTCTTCCCTTACAAGTCTaGCATTCTGGGTATCTCACTATAAGTTATTGTATA +
Preference number: 3 (lower is better)
Translates to: LRRGLGSLPLQV*HSGYLTISYCI
Trigger: TATACAATAACTTATAGTGAGATACCCAGAATGTCAGACTTGTAAGGGAAGACTGCCCAAACCCCTTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR TCA 72 bp TCTCGATCTCCTTGTTCTTTGAGGCCAGTTCCTTGTTaGGCTTCTCAATTTCCACTTCATTATGGTAAAGCT +
Preference number: 3 (lower is better)
Translates to: SRSPCSLRPVPC*ASQFPLHYGKA
Trigger: AGCTTTACCATAATGAAGTGGAAATTGAGAAGCTCAACAAGGAACTGGCCTCAAAGAACAAGGAGATCGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
3UTR CCA 72 bp CAGCATTTGCCAAATTATGGCACACAGTACCACCAGTaGTACGTGACTTCTTTGGTTGAAAACAGACAAATT +
Preference number: 3 (lower is better)
Translates to: QHLPNYGTQYHQ*YVTSLVENRQI
Trigger: AATTTGTCTGTTTTCAACCAAAGAAGTCACGTACCACTGGTGGTACTGTGTGCCATAATTTGGCAAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 72 bp ATAAGGAAGACAAGAACAGCTACACAGGCAGCCTCATaGAAGAACAGAAACTTGAAAATGGTTCATGATCCA +
Preference number: 3 (lower is better)
Translates to: IRKTRTATQAAS*KNRNLKMVHDP
Trigger: TGGATCATGAACCATTTTCAAGTTTCTGTTCTTCCATGAGGCTGCCTGTGTAGCTGTTCTTGTCTTCCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTACCTCCAGTGAGGAGCTaGACATCATTAAATCCTATG +
Preference number: 3 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLPPVRS*TSLNPM
Trigger: CATAGGATTTAATGATGTCAAGCTCCTCACTGGAGG...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATGGGTTCAAACCTTTTaGGGCCTCAGTTTCCTTATC +
Preference number: 3 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLWVQTF*GLSFLI
Trigger: GATAAGGAAACTGAGGCCCAAAAAGGTTTGAACCCA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAAAGCACTTGAATGACTaGGAAGACCTGGGTTCAAAC +
Preference number: 3 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQKHLND*EDLGSN
Trigger: GTTTGAACCCAGGTCTTCCAAGTCATTCAAGTGCTT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGCTTCAGTATTTGTTTaGCTGTTTCTTGCCTTCATG +
Preference number: 3 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSASVFV*LFLAFM
Trigger: CATGAAGGCAAGAAACAGCAAAACAAATACTGAAGC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGACCTGTCCAATACATaGACCTTCAAGGTTCAACCT +
Preference number: 3 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLDLSNT*TFKVQP
Trigger: AGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGACCTGTCCAATACATaGACCTTCAAGGTTCAACCT +
Preference number: 3 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQDLSNT*TFKVQP
Trigger: AGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAAGAAGGTCAAATGACTaGCCCAAGGTCAAACAACTA +
Preference number: 3 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLRRSND*PKVKQL
Trigger: TAGTTGTTTGACCTTGGGCAAGTCATTTGACCTTCT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTGGTACGTGACTTCTTaGGTTGAAAACAGACAAATT +
Preference number: 3 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSWYVTS*VENRQI
Trigger: AATTTGTCTGTTTTCAACCAAAGAAGTCACGTACCA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCAAGCACTTGAATGACTaGGAAGACCTGGGTTCAAAC +
Preference number: 3 (lower is better)
Translates to: FMSSCILFPISGNSFYFLKHLND*EDLGSN
Trigger: GTTTGAACCCAGGTCTTCCAAGTCATTCAAGTGCTT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCAAACTTAAGATACTGTaGTGGAGTACTCTTCAACTC +
Preference number: 3 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSKLKIL*WSTLQL
Trigger: GAGTTGAAGAGTACTCCACAACAGTATCTTAAGTTT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAAGATTTGACTCATCTTaGTGTTCCTGGTGCACAACA +
Preference number: 3 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQRFDSS*CSWCTT
Trigger: TGTTGTGCACCAGGAACACAAAGATGAGTCAAATCT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR TCA 72 bp AGAGACAAAATAAGCAAATATAGTAGTGTAAGAAGCTaGTTAACAGGGAAGCTACAGGCACGGGCACATACA +
Preference number: 3 (lower is better)
Translates to: RDKISKYSSVRS*LTGKLQARAHT
Trigger: TGTATGTGCCCGTGCCTGTAGCTTCCCTGTTAATCAGCTTCTTACACTACTATATTTGCTTATTTTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR TCA 72 bp ACAGAATGTCTAACTAACTTGAGGAATTCCAGTTGCTaGGGAGGATGTAAGCAGATTGTTTCAGAGATGGAT +
Preference number: 3 (lower is better)
Translates to: TECLTNLRNSSC*GGCKQIVSEMD
Trigger: ATCCATCTCTGAAACAATCTGCTTACATCCTCCTCAGCAACTGGAATTCCTCAAGTTAGTTAGACATTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 72 bp CTCCGTGATCTCATTATACAAATGTCTCATGACCTCTaGTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTT +
Preference number: 3 (lower is better)
Translates to: LRDLIIQMSHDL*LLMVSAAFSLL
Trigger: AAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCATGAGACATTTGTATAATGAGATCACGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 72 bp TGCCTTCATGTCTTCATGCATACTGTTTCCAATATCTaGAAATTCCTTCTACTTCCTCAACTGGCTAATTCC +
Preference number: 3 (lower is better)
Translates to: CLHVFMHTVSNI*KFLLLPQLANS
Trigger: GGAATTAGCCAGTTGAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CCA 72 bp GGGTTTGGGCAGTCTTCCCTTACAAGTCTGACATTCTaGGTATCTCACTATAAGTTATTGTATAAGAGATGT +
Preference number: 3 (lower is better)
Translates to: GFGQSSLTSLTF*VSHYKLLYKRC
Trigger: ACATCTCTTATACAATAACTTATAGTGAGATACCCAGAATGTCAGACTTGTAAGGGAAGACTGCCCAAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATTGTTTTGCTGTTTCTaGCCTTCATGTCTTCATGCA +
Preference number: 3 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQLFCCF*PSCLHA
Trigger: TGCATGAAGACATGAAGGCAAGAAACAGCAAAACAA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR TCA 72 bp TGCCAAATTATGGCACACAGTACCACCAGTGGTACGTaGCTTCTTTGGTTGAAAACAGACAAATTTATTTTG +
Preference number: 3 (lower is better)
Translates to: CQIMAHSTTSGT*LLWLKTDKFIL
Trigger: CAAAATAAATTTGTCTGTTTTCAACCAAAGAAGTCACGTACCACTGGTGGTACTGTGTGCCATAATTTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 72 bp TTCTACTGTCTCATGATCTTATCTATTCAAGCCTTCTaGTGCTTTGTGGATCTCATAGTCAGTTTTGTCTCA +
Preference number: 3 (lower is better)
Translates to: FYCLMILSIQAF*CFVDLIVSFVS
Trigger: TGAGACAAAACTGACTATGAGATCCACAAAGCAGCAGAAGGCTTGAATAGATAAGATCATGAGACAGTAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR GCA 72 bp CCTTTATTATTTTGCAAACATACTCACATGCACACATaGGGATACATACATACACACATACATACCCACACA +
Preference number: 3 (lower is better)
Translates to: PLLFCKHTHMHT*GYIHTHIHTHT
Trigger: TGTGTGGGTATGTATGTGTGTATGTATGTATCCGCATGTGTGCATGTGAGTATGTTTGCAAAATAATAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCAAACTTAAGATACTGTaGTGGAGTACTCTTCAACTC +
Preference number: 3 (lower is better)
Translates to: FMSSCILFPISGNSFYFLKLKIL*WSTLQL
Trigger: GAGTTGAAGAGTACTCCACAACAGTATCTTAAGTTT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTGGCGGCTGCTCTCCTaGCGGTCGATGCGGGCATCC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLWRLLS*RSMRAS
Trigger: GGATGCCCGCATCGACCGCCAGGAGAGCAGCCGCCA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GTAAAGCTTAAAGAGCTGCAGCTGTACCTGAGCCCGTACTACCTCATCCTTCAGGTTTCAGGAACCCCATaGCGGCCGCGGCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: VKLKELQLYLSPYYLILQVSGTP*RPRRRR
Trigger: CCGCCGGCGCCGCGGCCGTCATGGGGTTCCTGAAAC...CTGAAGGATGAGGTAGTACGGGCTCAGGTACAGCTGCAGCTCTTTAAGCTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGAGCAGGGCCAGAGCTaGCACTGTCTTCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLEQGQS*HCLLPA
Trigger: GGCGGGGAGAAGACAGTGGCAGCTCTGGCCCTGCTC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTCTGCCTTTCGCTGCTaGCGGCTGCTCTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGSAFRC*RLLSWR
Trigger: CCGCCAGGAGAGCAGCCGCCAGCAGCGAAAGGCAGA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGACAACGGTTGCCCTGTaGTGCCAGGAGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLTTVAL*CQEVVG
Trigger: CCCCACCACCTCCTGGCATCACAGGGCAACCGTTGT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTCTCCTGGCGGTCGATaGGGGCATCCCCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLSPGGR*GHPLAA
Trigger: AGCAGCTAGGGGATGCCCGCATCGACCGCCAGGAGA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCGATGCCAGGAGGTGGTaGGGCACGACAGGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGDARRW*GTTGES
Trigger: GCTCTCTCCTGTCGTGCCCCACCACCTCCTGGCATC...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGATCTCTGCCTTTCGCTaGTGGCGGCTGCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLISAFR*WRLLSW
Trigger: CCAGGAGAGCAGCCGCCAGCAGCGAAAGGCAGAGAT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCTCATCCCAGCGCCGTaGCTTGGCCTTCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGLIPAP*LGLQVT
Trigger: AGTGACCTGAAGGCCAAGGCACGGCGCTGGGATGAG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGGAATGCCTGGGCACTaGTATTGCGGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLGMPGH*YCGTGP
Trigger: AGGCCCTGTCCCGCAATAGCAGTGCCCAGGCATTCC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGGCCCGGTTGGCAGCTaGCTTGCCCACAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPGPVGS*LAHRSS
Trigger: GGAGCTCCTGTGGGCAAGCCAGCTGCCAACCGGGCC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTGTGATGCCAGGAGGTaGTGGGGCACGACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLCDARR*WGTTGE
Trigger: CTCTCCTGTCGTGCCCCACCACCTCCTGGCATCACA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCGGTCCTGCAGCTTCATaGCTCCCGGCGCTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGGPAAS*LPALQF
Trigger: GAACTGAAGCGCCGGGAGCCATGAAGCTGCAGGACC...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGTTTCAGGAACCCCATaGCGGCCGCGGCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLVSGTP*RPRRRR
Trigger: CCGCCGGCGCCGCGGCCGTCATGGGGTTCCTGAAAC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322213.9
ENST00000375340.10
CDS-3UTR GCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCGCTTGTCATACTCCTaGGCCAGCTCCCCAGAACGA +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGRLSYS*ASSPER
Trigger: TCGTTCTGGGGAGCTGGCGCAGGAGTATGACAAGCG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCTGGGCCAGGGTAGCTaGTCTCTTGCTGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLLGQGS*SLAGFF
Trigger: GAAGAAGCCAGCAAGAGAGCAGCTACCCTGGCCCAG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCTGGGCCAGGGTAGCTaGTCTCTTGCTGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGLGQGS*SLAGFF
Trigger: GAAGAAGCCAGCAAGAGAGCAGCTACCCTGGCCCAG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTTCGCTGCTGGCGGCTaGTCTCCTGGCGGTCGATGC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFFAAGG*SPGGRC
Trigger: GCATCGACCGCCAGGAGAGCAGCCGCCAGCAGCGAA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTCTGCCTTTCGCTGCTaGCGGCTGCTCTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFSAFRC*RLLSWR
Trigger: CCGCCAGGAGAGCAGCCGCCAGCAGCGAAAGGCAGA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTACCCAGCGCCGTGCCTTaGCCTTCAGGTCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLPSAVP*PSGHWP
Trigger: GGGCCAGTGACCTGAAGGCCAAGGCACGGCGCTGGG...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGACGAAGAAGGGGGCTaGCTTGTAGCTGTGGATGGC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLDEEGG*LVAVDG
Trigger: GCCATCCACAGCTACAAGCCAGCCCCCTTCTTCGTC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCGACGAAGAAGGGGGCTaGCTTGTAGCTGTGGATGGC +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGDEEGG*LVAVDG
Trigger: GCCATCCACAGCTACAAGCCAGCCCCCTTCTTCGTC...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCAGGGGCCCACGATTATaGGTGATGAGGGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGRGPRL*VMRGRK
Trigger: CTTCCTCCCCCTCATCACCCATAATCGTGGGCCCCT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCTCTTGGAAACACTGTaGTGCCCAGCCTCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGLLETL*CPASRE
Trigger: CTCACGGGAGGCTGGGCACCACAGTGTTTCCAAGAG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 72 bp CAAGCCCTAGGGAATCTACTCGGATCCAGCTTGCTCTaGGAAACACTGTGGTGCCCAGCCTCCCGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: QALGNLLGSSLL*ETLWCPASREH
Trigger: ATGCTCACGGGAGGCTGGGCACCACAGTGTTTCCAAGAGCAAGCTGGATCCGAGTAGATTCCCTAGGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 72 bp CTCCAACAAGCCCTAGGGAATCTACTCGGATCCAGCTaGCTCTTGGAAACACTGTGGTGCCCAGCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: LQQALGNLLGSS*LLETLWCPASR
Trigger: ACGGGAGGCTGGGCACCACAGTGTTTCCAAGAGCAAGCTGGATCCGAGTAGATTCCCTAGGGCTTGTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGCCTGTAGCAAGTTGTaGCGGTCACTGCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLACSKL*RSLRFC
Trigger: ACAGAAGCGCAGTGACCGTCACAACTTGCTACAGGC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTCAGGGGTCCAGGCATaGGGGTTATATTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGSGVQA*GLYSEG
Trigger: CCCCTCAGAATATAACCCTCATGCCTGGACCCCTGA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCTGTGGCCAGGATTGTaGGGTCACATGGTACAGAGC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLLWPGL*GHMVQS
Trigger: GCTCTGTACCATGTGACCTCACAATCCTGGCCACAG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCGTACGCCCGAGAACTaGGGTAGCCCGCGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQRTPEN*GSPRGK
Trigger: TTTCCCGCGCGGGCTACCTCAGTTCTCGGGCGTACG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375340.10
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCTGGAGCGCTGGGTCTaGAATTCAAAAGTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLLERWV*NSKVPP
Trigger: AGGCGGCACTTTTGAATTTCAGACCCAGCGCTCCAG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTCTCCTGGCGGTCGATaGGGGCATCCCCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFSPGGR*GHPLAA
Trigger: AGCAGCTAGGGGATGCCCGCATCGACCGCCAGGAGA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCCTGGGCACTGCTATTaGGGGACAGGGCCTTATAGA +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGPGHCY*GTGPYR
Trigger: TCTATAAGGCCCTGTCCCGCAATAGCAGTGCCCAGG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCTGACCCCCGAATTGTaGTCGTCCATAAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLLTPEL*SSIKAS
Trigger: GCTGGCCTTTATGGACGAGCACAATTCGGGGGTCAG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCATCAATCACTAGCTTaGCCCCCTTCAGCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLHQSLA*PPSAPG
Trigger: TCCGGGAGCTGAAGGGGGCCAAGCTAGTGATTGATG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCACTGTCTTGTGGCGCTaGTGGCCTCCAAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGTVLWR*WPPKAM
Trigger: CATTGCCTTTGGAGGCCACCAGCGCCACAAGACAGT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGCTTGTAGCTGTGGATaGCAAAGAGCAGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLACSCG*QRAGPE
Trigger: CTCTGGCCCTGCTCTTTGCCATCCACAGCTACAAGC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCCCGCAGCTTTTGCTTaGTCTTGGCCTCTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGPAAFA*SWPLSL
Trigger: TAGAGACAGAGGCCAAGATCAAGCAAAAGCTGCGGG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCAGGTCAGGACTTTGCTaGTCACACAGTCCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGRSGLC*SHSPLA
Trigger: AGCAAGGGGACTGTGTGATCAGCAAAGTCCTGACCT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCATCTGGGTACTTGGTaGGGTCGAAGGTCAGGACTT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLHLGTW*GRRSGL
Trigger: AAGTCCTGACCTTCGACCTCACCAAGTACCCAGATG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGACTCCTATGAGGTCCTaGGTACCTTTGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLTPMRS*VPLPSS
Trigger: TGAGCTGGGCAAAGGTACTCAGGACCTCATAGGAGT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCACTCCTATGAGGTCCTaGGTACCTTTGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGTPMRS*VPLPSS
Trigger: TGAGCTGGGCAAAGGTACTCAGGACCTCATAGGAGT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTCCAAGCACAGAGCCTaGCAAATAGAGGGTGTTCGG +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLSKHRA*QIEGVR
Trigger: CCGAACACCCTCTATTTGTCAGGCTCTGTGCTTGGA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCGTTCTTCAAACTCCTaGCGAGCCTTCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGRSSNS*RAFSTD
Trigger: GTCAGTGGAGAAGGCTCGGCAGGAGTTTGAAGAACG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCACGGGCATCCCCTAGCTaGTCCATCACCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPRASPS*SITWFS
Trigger: GCTGAACCAGGTGATGGAGCAGCTAGGGGATGCCCG...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCGGGCATCCCCTAGCTaGTCCATCACCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFRASPS*SITWFS
Trigger: GCTGAACCAGGTGATGGAGCAGCTAGGGGATGCCCG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCACAGACAAGGGCATTaGCACAAGCATACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLHRQGH*HKHTAG
Trigger: CCCTGCAGTATGCTTGTGGCAATGCCCTTGTCTGTG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCACCTGACGCAGCTCTaGCTCTTTCCGTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLHLTQL*LFPFCL
Trigger: AAGGCAAAACGGAAAGAGGCAGAGCTGCGTCAGGTG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCACCTGACGCAGCTCTaGCTCTTTCCGTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGHLTQL*LFPFCL
Trigger: AAGGCAAAACGGAAAGAGGCAGAGCTGCGTCAGGTG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGGAATGCCTGGGCACTaGTATTGCGGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPGMPGH*YCGTGP
Trigger: AGGCCCTGTCCCGCAATAGCAGTGCCCAGGCATTCC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCCTCGTGGCTCCTATTaGTTCATGGCTTCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLPRGSY*FMASSP
Trigger: TGGGCTAGAAGCCATGAAGCAATAGGAGCCACGAGG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTACTGCCTCATGGGTCCTaGAGCTTCATGGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLLPHGS*SFMAPG
Trigger: GCCGGGAGCCATGAAGCTGCAGGACCCATGAGGCAG...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCTGCCTCATGGGTCCTaGAGCTTCATGGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQLPHGS*SFMAPG
Trigger: GCCGGGAGCCATGAAGCTGCAGGACCCATGAGGCAG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACGGGAAACGCCGCAGTaGAAGCCGGGCGACCGGCAA +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLRETPQ*KPGDRQ
Trigger: TTGCCGGTCGCCCGGCTTGCACTGCGGCGTTTCCCG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375340.10
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCCCACAGGAGCTCCATaGATCAGGTCCCGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQPTGAP*IRSRRV
Trigger: GACCCTGCGGGACCTGATCCATGGAGCTCCTGTGGG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGAGATCCAGACGGTCCTaGTCAGCTTTCTGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLRSRRS*SAFWSR
Trigger: TCGAGACCAGAAAGCTGACCAGGACCGTCTGGATCT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATGGCGGCTGCTCTCCTaGCGGTCGATGCGGGCATCC +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLWRLLS*RSMRAS
Trigger: GGATGCCCGCATCGACCGCCAGGAGAGCAGCCGCCA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAGGGCCCAGGAATGCCTaGGCACTGCTATTGCGGGAC +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLGPRNA*ALLLRD
Trigger: GTCCCGCAATAGCAGTGCCCAGGCATTCCTGGGCCC...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGTTGGGGTTGGCATCTaGGTACTTGGTGAGGTCGAA +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLVGVGI*VLGEVE
Trigger: TTCGACCTCACCAAGTACCCAGATGCCAACCCCAAC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTGTGATGCCAGGAGGTaGTGGGGCACGACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFCDARR*WGTTGE
Trigger: CTCTCCTGTCGTGCCCCACCACCTCCTGGCATCACA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGATCCAGCTTGCTCTTaGAAACACTGTGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLDPACS*KHCGAQ
Trigger: CTGGGCACCACAGTGTTTCCAAGAGCAAGCTGGATC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGGTCCTGCAGCTTCATaGCTCCCGGCGCTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPGPAAS*LPALQF
Trigger: GAACTGAAGCGCCGGGAGCCATGAAGCTGCAGGACC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCGGTCCTGCAGCTTCATaGCTCCCGGCGCTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFGPAAS*LPALQF
Trigger: GAACTGAAGCGCCGGGAGCCATGAAGCTGCAGGACC...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCTCGATGCTAGCCCATaGCTTTTTCTGCCTCATGGG +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLLDASP*LFLPHG
Trigger: CCCATGAGGCAGAAAAAGCCATGGGCTAGCATCGAG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGTTTCAGGAACCCCATaGCGGCCGCGGCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQVSGTP*RPRRRR
Trigger: CCGCCGGCGCCGCGGCCGTCATGGGGTTCCTGAAAC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322213.9
ENST00000375340.10
CDS-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCACAGAGTAGACCATGCTaGCAAAGGCCCGGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPQSRPC*QRPGWQ
Trigger: CTGCCAACCGGGCCTTTGTCAGCATGGTCTACTCTG...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GTAAAGCTTAAAGAGCTGCAGCTGTACCTGAGCCCGTACTACCTCATCCTTCAGAGCTGCAGCTGTACCTaGGCCCGTACTACCTCATCC +
Preference number: 4 (lower is better)
Translates to: VKLKELQLYLSPYYLILQSCSCT*ARTTSS
Trigger: GGATGAGGTAGTACGGGCTCAGGTACAGCTGCAGCT...CTGAAGGATGAGGTAGTACGGGCTCAGGTACAGCTGCAGCTCTTTAAGCTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCTTTCTGGTCTCGATTaGATTTCTCCAGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLLSGLD*ISPAPG
Trigger: CCCAGGAGCTGGAGAAATTCAATCGAGACCAGAAAG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGCTGGCATAGGTCAATaGGGCGGCCGTACACAGAGC +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQAGIGQ*GGRTQS
Trigger: GCTCTGTGTACGGCCGCCTCATTGACCTATGCCAGC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTGCTCCTTGATATACTaGATACAGTCCCGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGCSLIY*IQSRPV
Trigger: GACAGGCCGGGACTGTATTCAGTATATCAAGGAGCA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTGCTCCTTGATATACTaGATACAGTCCCGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLCSLIY*IQSRPV
Trigger: GACAGGCCGGGACTGTATTCAGTATATCAAGGAGCA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCAAAGCGCTCCTTCTTaGTCTGTTCGAATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLQSAPS*SVRMPA
Trigger: AGCAGGCATTCGAACAGATCAAGAAGGAGCGCTTTG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCCACACAGTTGTAGTTaGTGCCATCCAAGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGPHSCS*CHPSRA
Trigger: AGCCCTACTTGGATGGCATCAACTACAACTGTGTGG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCATGTCTTCTCCCCGCCTaGCAAGTTGTCCATAGGCCG +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPCLLPA*QVVHRP
Trigger: CGGCCTATGGACAACTTGTCAGGCGGGGAGAAGACA...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTGCCTAAGACTCCTATaGGGTCCTGAGTACCTTTGC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLCLRLL*GPEYLC
Trigger: GCAAAGGTACTCAGGACCTCATAGGAGTCTTAGGCA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCGCTTGTCATACTCCTaGGCCAGCTCCCCAGAACGA +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFRLSYS*ASSPER
Trigger: TCGTTCTGGGGAGCTGGCGCAGGAGTATGACAAGCG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAATCTCTGCCTTTCGCTaGTGGCGGCTGCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLISAFR*WRLLSW
Trigger: CCAGGAGAGCAGCCGCCAGCAGCGAAAGGCAGAGAT...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGGCCTCCAAAGGCAATaGGGCGGGCATCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQGLQRQ*GGHLPR
Trigger: ACGTGGAAGATGCCCGCCGCATTGCCTTTGGAGGCC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCTCATCCCAGCGCCGTaGCTTGGCCTTCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQLIPAP*LGLQVT
Trigger: AGTGACCTGAAGGCCAAGGCACGGCGCTGGGATGAG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCAGTTGTGACGGTCACTaGGCTTCTGTTCAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGSCDGH*ASVQAW
Trigger: CCAAGCTTGAACAGAAGCGCAGTGACCGTCACAACT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCGGTCCTGAGTACCTTTaGCCAGCTCAGGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFGPEYL*PAQGCC
Trigger: ACAGCACCCCTGAGCTGGGCAAAGGTACTCAGGACC...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCATGTCACCCCCTCAGCTaGAGGCATCTGTTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPCHPLS*RHLLLP
Trigger: AGGGAGCAACAGATGCCTGCAGCTGAGGGGGTGACA...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCTCCTTGATCTCCTTCTCAATCTGCTGCTGCTCCCGCATCATTTTGCCCAGCTCATCCTTCAGGCGCTaGTACCGGTCAGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FSLISFSICCCSRIILPSSSFRR*YRSASS
Trigger: AGAAGAGGCTGACCGGTACCAGCGCCTGAAGGATGA...GCTGGGCAAAATGATGCGGGAGCAGCAGCAGATTGAGAAGGAGATCAAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGTCTTGTGGCGCTGGTaGCCTCCAAAGGCAATGCGG +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQVLWRW*PPKAMR
Trigger: CCGCATTGCCTTTGGAGGCCACCAGCGCCACAAGAC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCATGGCCTTCAGGTCACTaGCCCCACCAGAGATCACTC +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPWPSGH*PHQRSL
Trigger: GAGTGATCTCTGGTGGGGCCAGTGACCTGAAGGCCA...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTACCCACACACACAGTaGGCAAGAGGCCCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQYPHTQ*ARGPRG
Trigger: GCCCCTTGGGCCTCTTGCCCACTGTGTGTGTGGGTA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCTCTTGGAAACACTGTaGTGCCCAGCCTCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFLLETL*CPASRE
Trigger: CTCACGGGAGGCTGGGCACCACAGTGTTTCCAAGAG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCTAGTGCAGGCCTCCTaGTCTTTTTCCAGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLLVQAS*SFSSLL
Trigger: TAGGAGACTGGAAAAAGACCAGGAGGCCTGCACTAG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGGTTTCTGTTCCTCGTaGCTCCTATTGCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLGFCSS*LLLLHG
Trigger: GCCATGAAGCAATAGGAGCCACGAGGAACAGAAACC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 72 bp GTGTCCTCTTCAGCCTTCACCATTTCCTTCTTTCGCTaGTCATACTCCTGCGCCAGCTCCCCAGAACGACTA +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFFR*SYSCASSPERL
Trigger: TAGTCGTTCTGGGGAGCTGGCGCAGGAGTATGACAAGCGAAAGAAGGAAATGGTGAAGGCTGAAGAGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463684.1
3UTR CAA 72 bp GGCGCTGGTACCGGTCAGCCTCTTCTTTCTCCTGCTTaGCTTCCTTGCGTTCAGCCGCAATATTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GAGTGQPLLSPA*LPCVQPQYFSC
Trigger: GCAAGAAAAATATTGCGGCTGAACGCAAGGAAGCAAAGCAGGAGAAAGAAGAGGCTGACCGGTACCAGCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCATGGCGGTGAACCTCTaGAATGGTCCGATAATCTGT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGMAVNL*NGPIIC
Trigger: ACAGATTATCGGACCATTTCAGAGGTTCACCGCCAT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322213.9
ENST00000375340.10
CDS-3UTR TCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAAGCTGCAGCTGTACCTaGGCCCGTACTACCTCATCC +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLSCSCT*ARTTSS
Trigger: GGATGAGGTAGTACGGGCTCAGGTACAGCTGCAGCT...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCTGAGTCCTTCTCCTTaGTCTCCTTCTCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGLSPSP*SPSQSA
Trigger: AGCAGATTGAGAAGGAGATCAAGGAGAAGGACTCAG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTGGCTTTGATGTACTaGGGCCGCTTCTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGLALMY*GRFWFN
Trigger: ATTGAACCAGAAGCGGCCTCAGTACATCAAAGCCAA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCTGCTTCCAGCTTCTTaGTTTTGTGGGAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLLLPAS*FCGRCS
Trigger: AGAACACCTCCCACAAAATCAAGAAGCTGGAAGCAG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTCCCTCTCTCGGCTCTaGATGATCCTCTTGATATCA +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLSLSRL*MILLIS
Trigger: TGATATCAAGAGGATCATTCAGAGCCGAGAGAGGGA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCAGGTCTTGTAGCTaGGCCATGGTCTCATCTATG +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGFRSCS*AMVSSM
Trigger: CATAGATGAGACCATGGCTCAGCTACAAGACCTGAA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGCCTGTAGCAAGTTGTaGCGGTCACTGCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPACSKL*RSLRFC
Trigger: ACAGAAGCGCAGTGACCGTCACAACTTGCTACAGGC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTCCACTCCTAGTGCCTaGCCAAATCCTACCAATTTG +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLSTPSA*PNPTNL
Trigger: CAAATTGGTAGGATTTGGTCAGGCACTAGGAGTGGA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGGAGAACAGCAAAGGTaGCCTTTAAAGGGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLGEQQR*PLKGCE
Trigger: TTCACAGCCCTTTAAAGGTCACCTTTGCTGTTCTCC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGAGAAAGCACTTGAATaGCTTGGAAGACCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLEKALE*LGRPGF
Trigger: GAACCCAGGTCTTCCAAGTCATTCAAGTGCTTTCTC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGAAGTTAATTCCCCTCTaGGGACCTCAGAAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLKLIPL*GPQKGF
Trigger: AAACCCCTTCTGAGGTCCTCAGAGGGGAATTAACTT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCAAGTTAATTCCCCTCTaGGGACCTCAGAAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGKLIPL*GPQKGF
Trigger: AAACCCCTTCTGAGGTCCTCAGAGGGGAATTAACTT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AGAGACTTCTTGGCTGCTTCCAGCTTCTTGATTTTGTGGGAGGTGTTCTCCTTGCGCTTGTCATACTCCTaGGCCAGCTCCCCAGAACGA +
Preference number: 4 (lower is better)
Translates to: RDFLAASSFLILWEVFSLRLSYS*ASSPER
Trigger: TCGTTCTGGGGAGCTGGCGCAGGAGTATGACAAGCG...CAAGGAGAACACCTCCCACAAAATCAAGAAGCTGGAAGCAGCCAAGAAGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR GCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCATCTCCTTCTCAATCTaGTGCTGCTCCCGCATCATT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGISFSI*CCSRII
Trigger: AATGATGCGGGAGCAGCAGCAGATTGAGAAGGAGAT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCCAACGTCAAATCTCTaGCCTGACTCTGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLPTSNL*PDSDSL
Trigger: AAGAGAGTCAGAGTCAGGGCAGAGATTTGACGTTGG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTTCAACTTGTCTACTaGTTTCTCATCCCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGFQLVY*FLIPAP
Trigger: CGGCGCTGGGATGAGAAAGCAGTAGACAAGTTGAAA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGGCAACTTAATGTCCTaGATCTTACAGGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLGNLMS*ILQACS
Trigger: GCTACAGGCCTGTAAGATGCAGGACATTAAGTTGCC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCACTGCTTGGCCTTCTTTaGTCGCTTTCGGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPLLGLL*SLSGCF
Trigger: GAAGCAGCCCGAAAGCGAGCAAAGAAGGCCAAGCAG...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCTTGATCTGTTCGAATaGCTGCTTGGCCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLLDLFE*LLGLLC
Trigger: GCAAAGAAGGCCAAGCAGGCATTCGAACAGATCAAG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGGAGGGCAAAAATACTaGTACTGCTCATTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLGGQKY*YCSLGL
Trigger: CAACCCCAATGAGCAGTAGCAGTATTTTTGCCCTCC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTGCCCAGCTCAGGGGTaGTGTCATCCTAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFCPAQG*CHPKLS
Trigger: AGAGAGCTTAGGATGACAGCACCCCTGAGCTGGGCA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGGTCCTGAGTACCTTTaGCCAGCTCAGGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQGPEYL*PAQGCC
Trigger: ACAGCACCCCTGAGCTGGGCAAAGGTACTCAGGACC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCTGACCCCCGAATTGTaGTCGTCCATAAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFLTPEL*SSIKAS
Trigger: GCTGGCCTTTATGGACGAGCACAATTCGGGGGTCAG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCACTTTGGATGTGGGGGTaGAAGCAGGGAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPLWMWG*KQGTAA
Trigger: AGCAGCAGTTCCCTGCTTGCACCCCCACATCCAAAG...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTTGGAAACACTGTGGTaGCCAGCCTCCCGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFLETLW*PASREH
Trigger: ATGCTCACGGGAGGCTGGGCACCACAGTGTTTCCAA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCATTGGAAACACTGTGGTaGCCAGCCTCCCGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPLETLW*PASREH
Trigger: ATGCTCACGGGAGGCTGGGCACCACAGTGTTTCCAA...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTACTCGGATCCAGCTTaGTCTTGGAAACACTGTGGT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLYSDPA*SWKHCG
Trigger: ACCACAGTGTTTCCAAGAGCAAGCTGGATCCGAGTA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCTAATCTGTTTTCCATaGTGGTTGGCTAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGLICFP*WLASQP
Trigger: TGGCTGGCTAGCCAACCAGCATGGAAAACAGATTAG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCTTCTAGCCCATTGTTaGCTTGCTGCTTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGLLAHC*LAASWL
Trigger: AAGCCATGAAGCAGCAAGGCAACAATGGGCTAGAAG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCTCTTCCATTCCTGTTaGCATGTTGCCACATGGTTC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLLFHSC*HVATWF
Trigger: GAACCATGTGGCAACATGGCAACAGGAATGGAAGAG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTGTCACCCCCTCAGCTaGAGGCATCTGTTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQCHPLS*RHLLLP
Trigger: AGGGAGCAACAGATGCCTGCAGCTGAGGGGGTGACA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCGGGCTGAAACAGAAGTaGACCGTTTGGGACCGAAGG +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFGLKQK*TVWDRR
Trigger: CCTTCGGTCCCAAACGGTGCACTTCTGTTTCAGCCC...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACCCACAGGAGCTCCATaGATCAGGTCCCGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLPTGAP*IRSRRV
Trigger: GACCCTGCGGGACCTGATCCATGGAGCTCCTGTGGG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGGCCCGGTTGGCAGCTaGCTTGCCCACAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLGPVGS*LAHRSS
Trigger: GGAGCTCCTGTGGGCAAGCCAGCTGCCAACCGGGCC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCGATTCCACAGCACCCTaGAAAACGAGGAAGTTACGA +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGDSTAP*KTRKLR
Trigger: TCGTAACTTCCTCGTTTTCCAGGGTGCTGTGGAATC...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTCATCCTTCAGGCGCTaGTACCGGTCAGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFSSFRR*YRSASS
Trigger: AGAAGAGGCTGACCGGTACCAGCGCCTGAAGGATGA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCATCAATACGCCGCTTaGCCATCTCCACCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFHQYAA*PSPPPL
Trigger: CAGAGGAGGTGGAGATGGCCAAGCGGCGTATTGATG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGTGGCGGCTGCTCTCCTaGCGGTCGATGCGGGCATCC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKWRLLS*RSMRAS
Trigger: GGATGCCCGCATCGACCGCCAGGAGAGCAGCCGCCA...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAAGTGCCACTGTCTTGTaGCGCTGGTGGCCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLSATVL*RWWPPK
Trigger: CTTTGGAGGCCACCAGCGCCACAAGACAGTGGCACT...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCCCAGCGCCGTGCCTTaGCCTTCAGGTCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLPSAVP*PSGHWP
Trigger: GGGCCAGTGACCTGAAGGCCAAGGCACGGCGCTGGG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGCTTCTGTTCAAGCTTaGTCTCAATGGCTGTCACCT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLASVQA*SQWLSP
Trigger: AGGTGACAGCCATTGAGACCAAGCTTGAACAGAAGC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTCATCTGAGGTCTCCTaGAACTTGTCTCGGACACTT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLSSEVS*NLSRTL
Trigger: AAGTGTCCGAGACAAGTTCCAGGAGACCTCAGATGA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGAGGGGCCCACGATTATaGGTGATGAGGGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQRGPRL*VMRGRK
Trigger: CTTCCTCCCCCTCATCACCCATAATCGTGGGCCCCT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCGGTATACAGCCAGTTTaGGAACCACACTGTCCTACA +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGGIQPV*EPHCPT
Trigger: TGTAGGACAGTGTGGTTCCCAAACTGGCTGTATACC...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGGTATACAGCCAGTTTaGGAACCACACTGTCCTACA +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLGIQPV*EPHCPT
Trigger: TGTAGGACAGTGTGGTTCCCAAACTGGCTGTATACC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGAGGGGGCAGTGTAATTaGCAACCATCTTGTTTGACC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLRGQCN*QPSCLT
Trigger: GGTCAAACAAGATGGTTGCCAATTACACTGCCCCCT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTTCTCAATCCGCTTCTaGTTCTCTTCAATTTCCCGC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLFSIRF*FSSISR
Trigger: GCGGGAAATTGAAGAGAATCAGAAGCGGATTGAGAA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGGTTCAGCTCCTTATTaGTTTCATCAATACGCCGCT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLGSAPY*FHQYAA
Trigger: AGCGGCGTATTGATGAAATCAATAAGGAGCTGAACC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCGGTTCAGCTCCTTATTaGTTTCATCAATACGCCGCT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGGSAPY*FHQYAA
Trigger: AGCGGCGTATTGATGAAATCAATAAGGAGCTGAACC...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCACTCTGGGAGTACTTaGGCCGCATCTGCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQHSGST*AASAVH
Trigger: ATGGACTGCAGATGCGGCTCAAGTACTCCCAGAGTG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAGCCTGTAGCAAGTTGTaGCGGTCACTGCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLACSKL*RSLRFC
Trigger: ACAGAAGCGCAGTGACCGTCACAACTTGCTACAGGC...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGATCCATGGTGCCTTTTaGCAGTGGCAACTTAATGTC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLIHGAF*QWQLNV
Trigger: GACATTAAGTTGCCACTGTCAAAAGGCACCATGGAT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCAGGAATTCCAGTTGCTaGGGAGGATGTAAGCAGATT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGRNSSC*GGCKQI
Trigger: AATCTGCTTACATCCTCCTCAGCAACTGGAATTCCT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCACATTCTGCCTCCCTaGAAGATCTGGTTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLHILPP*KIWLFH
Trigger: ATGAAACAACCAGATCTTTCAGGGAGGCAGAATGTG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCGTTCTTCAAACTCCTaGCGAGCCTTCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFRSSNS*RAFSTD
Trigger: GTCAGTGGAGAAGGCTCGGCAGGAGTTTGAAGAACG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CGCTTCTTGTCCTTCTCGATCTCCTTGTTCTTTGAGGCCAGTTCCTTGTTGAGCCGTTCTTCAAACTCCTaGCGAGCCTTCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: RFLSFSISLFFEASSLLSRSSNS*RAFSTD
Trigger: GTCAGTGGAGAAGGCTCGGCAGGAGTTTGAAGAACG...GCTCAACAAGGAACTGGCCTCAAAGAACAAGGAGATCGAGAAGGACAAGAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTTCGCTGCTGGCGGCTaGTCTCCTGGCGGTCGATGC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLFAAGG*SPGGRC
Trigger: GCATCGACCGCCAGGAGAGCAGCCGCCAGCAGCGAA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGGCCTCCAAAGGCAATaGGGCGGGCATCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLGLQRQ*GGHLPR
Trigger: ACGTGGAAGATGCCCGCCGCATTGCCTTTGGAGGCC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTGCCTCTTTCCGTTTTaGCTTCATCTGCTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLCLFPF*LHLLFQ
Trigger: CTGAAAGAGCAGATGAAGGCAAAACGGAAAGAGGCA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCAAACTCCCGGATGTTaGGCACACCAATCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQQTPGC*AHQSPD
Trigger: GTCGGGAGATTGGTGTGCGCAACATCCGGGAGTTTG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTCATTCAGCTTCTGCTaGAGTGTGTTCATCTCTTGC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLSFSFC*SVFISC
Trigger: GCAAGAGATGAACACACTGCAGCAGAAGCTGAATGA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACTCAGGGCCCAGGAATaGCTGGGCACTGCTATTGCG +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLRAQE*LGTAIA
Trigger: CGCAATAGCAGTGCCCAGGCATTCCTGGGCCCTGAG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCGGTAGACCCCATCAGTaGCCTGAAACTTTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFGRPHQ*PETFPV
Trigger: GACTGGGAAAGTTTCAGGGCACTGATGGGGTCTACC...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCACATGTGTTCCTGTGTaGCAGGGCCTTAGCCTAAGG +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFTCVPV*QGLSLR
Trigger: CCTTAGGCTAAGGCCCTGGCACACAGGAACACATGT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAATTCCTACTGGCCTTTaGCCTAGTGCAGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLIPTGL*PSAGLL
Trigger: CAGGAGGCCTGCACTAGGGCAAAGGCCAGTAGGAAT...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGCCCATGGCTTTTTCTaGCTCATGGGTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQAHGFF*LMGPAA
Trigger: AGCTGCAGGACCCATGAGGCAGAAAAAGCCATGGGC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAAGATCCAGACGGTCCTaGTCAGCTTTCTGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPRSRRS*SAFWSR
Trigger: TCGAGACCAGAAAGCTGACCAGGACCGTCTGGATCT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCATCAATCACTAGCTTaGCCCCCTTCAGCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQHQSLA*PPSAPG
Trigger: TCCGGGAGCTGAAGGGGGCCAAGCTAGTGATTGATG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTACATCAATCACTAGCTTaGCCCCCTTCAGCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLHQSLA*PPSAPG
Trigger: TCCGGGAGCTGAAGGGGGCCAAGCTAGTGATTGATG...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGACTGTCTTGTGGCGCTaGTGGCCTCCAAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQTVLWR*WPPKAM
Trigger: CATTGCCTTTGGAGGCCACCAGCGCCACAAGACAGT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAACTGTCTTGTGGCGCTaGTGGCCTCCAAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLTVLWR*WPPKAM
Trigger: CATTGCCTTTGGAGGCCACCAGCGCCACAAGACAGT...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGCTCACTCTCCAGCTTaGATTTTTCCTGCAGATTCA +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLAHSPA*IFPADS
Trigger: TGAATCTGCAGGAAAAATCCAAGCTGGAGAGTGAGC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATGCGAGGCCCAAAGTTaGCTAGCTCACTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLCEAQS*LAHSPA
Trigger: AGCTGGAGAGTGAGCTAGCCAACTTTGGGCCTCGCA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCGTTGGGGTTGGCATCTaGGTACTTGGTGAGGTCGAA +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFVGVGI*VLGEVE
Trigger: TTCGACCTCACCAAGTACCCAGATGCCAACCCCAAC...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGTTGGGGTTGGCATCTaGGTACTTGGTGAGGTCGAA +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPVGVGI*VLGEVE
Trigger: TTCGACCTCACCAAGTACCCAGATGCCAACCCCAAC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCACACAGTACCACCAGTaGTACGTGACTTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGTQYHQ*YVTSLV
Trigger: AACCAAAGAAGTCACGTACCACTGGTGGTACTGTGT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCACACATCCTTTGGATGTaGGGGTGCAAGCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPHILWM*GCKQGT
Trigger: AGTTCCCTGCTTGCACCCCCACATCCAAAGGATGTG...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATGTGATGCCAGGAGGTaGTGGGGCACGACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLCDARR*WGTTGE
Trigger: CTCTCCTGTCGTGCCCCACCACCTCCTGGCATCACA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCGACCCTCTTCCAATCTaGTTCCTCTCTACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGDPLPI*FLSTFS
Trigger: AGAAAAGGTAGAGAGGAACCAGATTGGAAGAGGGTC...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCAAGGAAAGAGATGACTaGGACAGGGTAGGAATCATG +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGKERDD*DRVGIM
Trigger: CATGATTCCTACCCTGTCCCAGTCATCTCTTTCCTT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 72 bp TTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTaGGAGGCTTCTTCTGTCCCTAATAGCTGGGATCAG +
Preference number: 4 (lower is better)
Translates to: FPSQQGIQHLPD*EASSVPNSWDQ
Trigger: CTGATCCCAGCTATTAGGGACAGAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 72 bp GACCCCCGAATTGTGCTCGTCCATAAAGGCCAGCATTaGCCAAATTATGGCACACAGTACCACCAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: DPRIVLVHKGQH*PNYGTQYHQWY
Trigger: GTACCACTGGTGGTACTGTGTGCCATAATTTGGCAAATGCTGGCCTTTATGGACGAGCACAATTCGGGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAAGCTGCAGCTGTACCTaGGCCCGTACTACCTCATCC +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLSCSCT*ARTTSS
Trigger: GGATGAGGTAGTACGGGCTCAGGTACAGCTGCAGCT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCCCCACGCTGCTCCTTaGTATACTGAATACAGTCCC +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQPHAAP*YTEYSP
Trigger: GGGACTGTATTCAGTATATCAAGGAGCAGCGTGGGG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAACTGCAGGGCCTTTTTaGTATGAGGTGGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPTAGPF*YEVAHS
Trigger: GCTATGAGCCACCTCATATCAAAAAGGCCCTGCAGT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCCCAAGCGAGTCTTCTaGTTCTCAAACTCCAAACGC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFPKRVF*FSNSKR
Trigger: GCGTTTGGAGTTTGAGAATCAGAAGACTCGCTTGGG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTTTTCAAAATCCAACTaGATGCCCAAGCGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLFSKSN*MPKRVF
Trigger: GAAGACTCGCTTGGGCATTCAGTTGGATTTTGAAAA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGATCTCCTCCATCTCATaGTTCTTGTCATTCACTTCC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLISSIS*FLSFTS
Trigger: GGAAGTGAATGACAAGAATCATGAGATGGAGGAGAT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTGTTCATCTCTTGCTTaGTCTCTTCCTCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFCSSLA*SLPQPG
Trigger: CCCAGGCTGAGGAAGAGATCAAGCAAGAGATGAACA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCATGTTCATCTCTTGCTTaGTCTCTTCCTCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPCSSLA*SLPQPG
Trigger: CCCAGGCTGAGGAAGAGATCAAGCAAGAGATGAACA...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCATCTGGGTACTTGGTaGGGTCGAAGGTCAGGACTT +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQHLGTW*GRRSGL
Trigger: AAGTCCTGACCTTCGACCTCACCAAGTACCCAGATG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGGCAGGATAAAGATTTaGCTCATCTTTGTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLGRIKI*LIFVFL
Trigger: CAGGAACACAAAGATGAGTCAAATCTTTATCCTGCC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTGCTCCTGTCAGTGTTaGTCACACTGTATGGTTAAT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGCSCQC*SHCMVN
Trigger: ATTAACCATACAGTGTGATCAACACTGACAGGAGCA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCAGTAGTGTAAGAAGCTaGTTAACAGGGAAGCTACAG +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGSSVRS*LTGKLQ
Trigger: CTGTAGCTTCCCTGTTAATCAGCTTCTTACACTACT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCATTGAACTGGATGAATaGATCAATGGCTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGIELDE*INGLWR
Trigger: CCTCCACAAGCCATTGATTCATTCATCCAGTTCAAT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGATTGAACTGGATGAATaGATCAATGGCTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLIELDE*INGLWR
Trigger: CCTCCACAAGCCATTGATTCATTCATCCAGTTCAAT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGAACGTTCACTTCTTCTaGATAGCTCACATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLNVHFF*IAHILP
Trigger: AGGCAGAATGTGAGCTATTCAGAAGAAGTGAACGTT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTCCTCCTACTGCTACTaGCTAACTTCTTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFSSYCY*LTSFCP
Trigger: GGGGCAGAAAGAAGTTAGTCAGTAGCAGTAGGAGGA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CGCTTCTTGTCCTTCTCGATCTCCTTGTTCTTTGAGGCCAGTTCCTTGTTGAGCGCTCCCGCATCATTTTaGCCAGCTCCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RFLSFSISLFFEASSLLSAPASF*PAPSSS
Trigger: AGAAGAAGAAGGAGCTGGGCAAAATGATGCGGGAGC...GCTCAACAAGGAACTGGCCTCAAAGAACAAGGAGATCGAGAAGGACAAGAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR GCA 90 bp TTCTCCTTGATCTCCTTCTCAATCTGCTGCTGCTCCCGCATCATTTTGCCCAGCATCTCCTTCTCAATCTaGTGCTGCTCCCGCATCATT +
Preference number: 4 (lower is better)
Translates to: FSLISFSICCCSRIILPSISFSI*CCSRII
Trigger: AATGATGCGGGAGCAGCAGCAGATTGAGAAGGAGAT...GCTGGGCAAAATGATGCGGGAGCAGCAGCAGATTGAGAAGGAGATCAAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTCTCCTGGCGGTCGATaGGGGCATCCCCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLSPGGR*GHPLAA
Trigger: AGCAGCTAGGGGATGCCCGCATCGACCGCCAGGAGA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTACACAGACAAGGGCATTaGCACAAGCATACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLHRQGH*HKHTAG
Trigger: CCCTGCAGTATGCTTGTGGCAATGCCCTTGTCTGTG...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTTGGCGATTTCATTCTaGCGTTTCACCTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLLAISF*RFTFSS
Trigger: GGAAGAAAAGGTGAAACGGCAGAATGAAATCGCCAA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGGAATGCCTGGGCACTaGTATTGCGGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSGMPGH*YCGTGP
Trigger: AGGCCCTGTCCCGCAATAGCAGTGCCCAGGCATTCC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCTCAGGGCCCAGGAATaGCTGGGCACTGCTATTGCG +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSLRAQE*LGTAIA
Trigger: CGCAATAGCAGTGCCCAGGCATTCCTGGGCCCTGAG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAGGTAGACCCCATCAGTaGCCTGAAACTTTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLGRPHQ*PETFPV
Trigger: GACTGGGAAAGTTTCAGGGCACTGATGGGGTCTACC...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCGCACCCGGCTTTGCTaGCTCTGCATGATCCTTATA +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQRTRLC*LCMILI
Trigger: TATAAGGATCATGCAGAGGCAGCAAAGCCGGGTGCG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCTACAGCAAGGCTACTaGGTCCACAGTATAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFLQQGY*VHSIRE
Trigger: CTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTACCATTGTTGCCTTGCTaGTTCATGGCTTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLPLLPC*FMASAT
Trigger: GGTGGCAGAAGCCATGAAGCAGCAAGGCAACAATGG...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCCATTGTTGCCTTGCTaGTTCATGGCTTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQPLLPC*FMASAT
Trigger: GGTGGCAGAAGCCATGAAGCAGCAAGGCAACAATGG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCATTCTTTTGTGTGGGCTaGCATAGGTCAATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPFFCVG*HRSMRR
Trigger: CCGCCTCATTGACCTATGCCAGCCCACACAAAAGAA...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATGGCCTTCAGGTCACTaGCCCCACCAGAGATCACTC +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLWPSGH*PHQRSL
Trigger: GAGTGATCTCTGGTGGGGCCAGTGACCTGAAGGCCA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTGTTCTAGGTCACTCTaGGAGTACTTGAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFCSRSL*EYLSRI
Trigger: GATGCGGCTCAAGTACTCCCAGAGTGACCTAGAACA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTTTCCAGCTTTTCCATaGCCTTCATGTTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQFPAFP*PSCWGR
Trigger: CCGCCCCCAACATGAAGGCCATGGAAAAGCTGGAAA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATTTCCAGCTTTTCCATaGCCTTCATGTTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLFPAFP*PSCWGR
Trigger: CCGCCCCCAACATGAAGGCCATGGAAAAGCTGGAAA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGAGATGACGATGGCCTaGAAGTTGCAAGTCGACTGC +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQEMTMA*KLQVDC
Trigger: GCAGTCGACTTGCAACTTCCAGGCCATCGTCATCTC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGACTGCTACTGCTCATTaGGGTTGGGGTTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQTATAH*GWGWHL
Trigger: CAGATGCCAACCCCAACCCCAATGAGCAGTAGCAGT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCATCCTAAGCTCTCTTaGAATCAAATTCAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGHPKLS*NQIQPR
Trigger: CCTAGGCTGAATTTGATTCCAAGAGAGCTTAGGATG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGATGCCAGGAGGTGGTaGGGCACGACAGGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKDARRW*GTTGES
Trigger: GCTCTCTCCTGTCGTGCCCCACCACCTCCTGGCATC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCGTTTTCCATGCTGGTTaGCTAGCCAGCCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFVFHAG*LASQKQ
Trigger: CTGTTTCTGGCTGGCTAGCCAACCAGCATGGAAAAC...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGATGTGACTCTTACCTaGGAAAGCCCTCAAAAACAT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLDVTLT*ESPQKH
Trigger: ATGTTTTTGAGGGCTTTCCCAGGTAAGAGTCACATC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTACTCGATGCTAGCCCATaGCTTTTTCTGCCTCATGGG +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLLDASP*LFLPHG
Trigger: CCCATGAGGCAGAAAAAGCCATGGGCTAGCATCGAG...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCAGAAGTGCACCGTTTaGGACCGAAGGCCACGGGAG +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSQKCTV*DRRPRE
Trigger: CTCCCGTGGCCTTCGGTCCCAAACGGTGCACTTCTG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675504.1
3UTR CAA 72 bp TTCCTGTTGCCATGTTGCCACATGGTTCTGGCTACCTaGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: FLLPCCHMVLAT*WFLQSHRFYCL
Trigger: GAGACAGTAGAAGCGATGAGACTGCAAGAACCACAAGGTAGCCAGAACCATGTGGCAACATGGCAACAGGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAAAGAACCTCCTACAATaGCACGGGCAAAGGTACGGT +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLKNLLQ*HGQRYG
Trigger: ACCGTACCTTTGCCCGTGTCATTGTAGGAGGTTCTT...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGATCTCCTTGTTCTTTaGGGCCAGTTCCTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPDLLVL*GQFLVE
Trigger: CTCAACAAGGAACTGGCCTCAAAGAACAAGGAGATC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TCCTTCAGTTCATCCTCCACCTTGTCCATACGCTTCTTGTCCTTCTCGATCTCCCTGAGTCCTTCTCCTTaGTCTCCTTCTCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: SFSSSSTLSIRFLSFSISLSPSP*SPSQSA
Trigger: AGCAGATTGAGAAGGAGATCAAGGAGAAGGACTCAG...GGAGATCGAGAAGGACAAGAAGCGTATGGACAAGGTGGAGGATGAACTGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR TCA 90 bp CGCTTCTTGTCCTTCTCGATCTCCTTGTTCTTTGAGGCCAGTTCCTTGTTGAGCCTGCTTCCAGCTTCTTaGTTTTGTGGGAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: RFLSFSISLFFEASSLLSLLPAS*FCGRCS
Trigger: AGAACACCTCCCACAAAATCAAGAAGCTGGAAGCAG...GCTCAACAAGGAACTGGCCTCAAAGAACAAGGAGATCGAGAAGGACAAGAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCTTTCTGGTCTCGATTaGATTTCTCCAGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQLSGLD*ISPAPG
Trigger: CCCAGGAGCTGGAGAAATTCAATCGAGACCAGAAAG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCACAGGGTAAAGGCGCTTaGTGCTTTCCATTATCTCTG +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPQGKGA*CFPLSL
Trigger: CAGAGATAATGGAAAGCATCAAGCGCCTTTACCCTG...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCAGGGTAAAGGCGCTTaGTGCTTTCCATTATCTCTG +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFQGKGA*CFPLSL
Trigger: CAGAGATAATGGAAAGCATCAAGCGCCTTTACCCTG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGCTGGCATAGGTCAATaGGGCGGCCGTACACAGAGC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKAGIGQ*GGRTQS
Trigger: GCTCTGTGTACGGCCGCCTCATTGACCTATGCCAGC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCCATGGTCTCATCTATaGTCTTCATGTGTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGPWSHL*SSCVFV
Trigger: AACAAAGACACATGAAGATCATAGATGAGACCATGG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCGTAGTCAATCTCAATaGGGGCCTCTCGTGCATAGA +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQRSQSQ*GPLVHR
Trigger: TCTATGCACGAGAGGCCCTCATTGAGATTGACTACG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCCACACAGTTGTAGTTaGTGCCATCCAAGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQPHSCS*CHPSRA
Trigger: AGCCCTACTTGGATGGCATCAACTACAACTGTGTGG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAAAGTCGACTGCTCCTTaGTGTAATTTGCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPKSTAP*CNLPPC
Trigger: GCAAGGTGGCAAATTACATCAAGGAGCAGTCGACTT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCAAGTCGACTGCTCCTTaGTGTAATTTGCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFKSTAP*CNLPPC
Trigger: GCAAGGTGGCAAATTACATCAAGGAGCAGTCGACTT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGGTAGAGATCATGTCTaGTTCAACTCTGTATTCCAA +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLGRDHV*FNSVFQ
Trigger: TTGGAATACAGAGTTGAATCAGACATGATCTCTACC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCACACATCAAACCTGTaGTTTCACAGATATCACTAC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLHTSNL*FHRYHY
Trigger: GTAGTGATATCTGTGAAATCACAGGTTTGATGTGTG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGGAGAACAGCAAAGGTaGCCTTTAAAGGGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPGEQQR*PLKGCE
Trigger: TTCACAGCCCTTTAAAGGTCACCTTTGCTGTTCTCC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAACAACGGTTGCCCTGTaGTGCCAGGAGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLTTVAL*CQEVVG
Trigger: CCCCACCACCTCCTGGCATCACAGGGCAACCGTTGT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCAAGTTAATTCCCCTCTaGGGACCTCAGAAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFKLIPL*GPQKGF
Trigger: AAACCCCTTCTGAGGTCCTCAGAGGGGAATTAACTT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGCCACCCCTGTAAGGTaGAGTCCTTATGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLATPVR*SPYASP
Trigger: TGGACTGGCATAAGGACTTCACCTTACAGGGGTGGC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCACCCTGTGGCTCCGTaGTCTCATTATACAAATGTC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFHPVAP*SHYTNV
Trigger: GACATTTGTATAATGAGATCACGGAGCCACAGGGTG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTGCTTCCCAAATTGGTaGCTCAACTCCTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFCFPNW*LNSFLA
Trigger: AGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAGCTCCCGCATCATTTTaGCCAGCTCCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLAPASF*PAPSSS
Trigger: AGAAGAAGAAGGAGCTGGGCAAAATGATGCGGGAGC...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTTCGCTGCTGGCGGCTaGTCTCCTGGCGGTCGATGC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLFAAGG*SPGGRC
Trigger: GCATCGACCGCCAGGAGAGCAGCCGCCAGCAGCGAA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGGCCTCCAAAGGCAATaGGGCGGGCATCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLGLQRQ*GGHLPR
Trigger: ACGTGGAAGATGCCCGCCGCATTGCCTTTGGAGGCC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCTCATCCCAGCGCCGTaGCTTGGCCTTCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLIPAP*LGLQVT
Trigger: AGTGACCTGAAGGCCAAGGCACGGCGCTGGGATGAG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGAGCAGGGCCAGAGCTaGCACTGTCTTCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLEQGQS*HCLLPA
Trigger: GGCGGGGAGAAGACAGTGGCAGCTCTGGCCCTGCTC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTGTAATTTGCCACCTTaGCAATGTTGGTGTTATCCA +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLCNLPP*QCWCYP
Trigger: TGGATAACACCAACATTGGCAAGGTGGCAAATTACA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGGAGGGCAAAAATACTaGTACTGCTCATTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPGGQKY*YCSLGL
Trigger: CAACCCCAATGAGCAGTAGCAGTATTTTTGCCCTCC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTACTCGGATCCAGCTTaGTCTTGGAAACACTGTGGT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFYSDPA*SWKHCG
Trigger: ACCACAGTGTTTCCAAGAGCAAGCTGGATCCGAGTA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCTAATCTGTTTTCCATaGTGGTTGGCTAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFLICFP*WLASQP
Trigger: TGGCTGGCTAGCCAACCAGCATGGAAAACAGATTAG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCTTCTAGCCCATTGTTaGCTTGCTGCTTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFLLAHC*LAASWL
Trigger: AAGCCATGAAGCAGCAAGGCAACAATGGGCTAGAAG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATTCCTGTTGCCATGTTaGCACATGGTTCTGGCTACC +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLFLLPC*HMVLAT
Trigger: GGTAGCCAGAACCATGTGGCAACATGGCAACAGGAA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAAATCCATGGCTTTTCTaGATTGTAGCTCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPNPWLF*IVAPAA
Trigger: GGCAGCAGGAGCTACAATGCAGAAAAGCCATGGATT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCAATCCATGGCTTTTCTaGATTGTAGCTCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFNPWLF*IVAPAA
Trigger: GGCAGCAGGAGCTACAATGCAGAAAAGCCATGGATT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGTTGGAGTGTACCAATaGGAGGCGAGAGAGGACGCT +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLVGVYQ*EAREDA
Trigger: AGCGTCCTCTCTCGCCTCGCATTGGTACACTCCAAC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GTAAAGCTTAAAGAGCTGCAGCTGTACCTGAGCCCGTACTACCTCATCCTTCAGGGTGAACCTCTGAAATaGTCCGATAATCTGTCGACC +
Preference number: 4 (lower is better)
Translates to: VKLKELQLYLSPYYLILQGEPLK*SDNLST
Trigger: GGTCGACAGATTATCGGACCATTTCAGAGGTTCACC...CTGAAGGATGAGGTAGTACGGGCTCAGGTACAGCTGCAGCTCTTTAAGCTTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCTGTACTCATGTAGTTaGACCACTTTGTTGTTGATC +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGLYSCS*TTLLLI
Trigger: GATCAACAACAAAGTGGTCCAACTACATGAGTACAG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCGATTCCACAGCACCCTaGAAAACGAGGAAGTTACGA +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFDSTAP*KTRKLR
Trigger: TCGTAACTTCCTCGTTTTCCAGGGTGCTGTGGAATC...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATCATCCTTCAGGCGCTaGTACCGGTCAGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLSSFRR*YRSASS
Trigger: AGAAGAGGCTGACCGGTACCAGCGCCTGAAGGATGA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACATCAATACGCCGCTTaGCCATCTCCACCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLHQYAA*PSPPPL
Trigger: CAGAGGAGGTGGAGATGGCCAAGCGGCGTATTGATG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCTGCCTTTCGCTGCTaGCGGCTGCTCTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSAFRC*RLLSWR
Trigger: CCGCCAGGAGAGCAGCCGCCAGCAGCGAAAGGCAGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTGTTCTAGGTCACTCTaGGAGTACTTGAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQCSRSL*EYLSRI
Trigger: GATGCGGCTCAAGTACTCCCAGAGTGACCTAGAACA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAATCTCTTCCTCAGCCTaGGCATCCTTCAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLISSSA*ASFRSS
Trigger: TGAGGATCTGAAGGATGCCCAGGCTGAGGAAGAGAT...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTCATCTGAGGTCTCCTaGAACTTGTCTCGGACACTT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFSSEVS*NLSRTL
Trigger: AAGTGTCCGAGACAAGTTCCAGGAGACCTCAGATGA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGTTCGAATGCCTGCTTaGCCTTCTTTGCTCGCTTTC +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQVRMPA*PSLLAF
Trigger: GAAAGCGAGCAAAGAAGGCCAAGCAGGCATTCGAAC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGGGCCCAGGAATGCCTaGGCACTGCTATTGCGGGAC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLGPRNA*ALLLRD
Trigger: GTCCCGCAATAGCAGTGCCCAGGCATTCCTGGGCCC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGCTTGTAGCTGTGGATaGCAAAGAGCAGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLACSCG*QRAGPE
Trigger: CTCTGGCCCTGCTCTTTGCCATCCACAGCTACAAGC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCCACCTTGCCAATGTTaGTGTTATCCAAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFPPCQC*CYPRQH
Trigger: ATGCTGCCTTGGATAACACCAACATTGGCAAGGTGG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCACCACCTTGCCAATGTTaGTGTTATCCAAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPPPCQC*CYPRQH
Trigger: ATGCTGCCTTGGATAACACCAACATTGGCAAGGTGG...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTCAGATTTCCAGAGGTaGGACCAGAGCAATTTATTT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGSDFQR*DQSNLF
Trigger: AAATAAATTGCTCTGGTCCCACCTCTGGAAATCTGA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTGCCGTACCTGTTTGTaGTATACAGCCAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFCRTCL*YTASLG
Trigger: TCCCAAACTGGCTGTATACCACAAACAGGTACGGCA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGAGTTCACATCTGATCTaGAGTCCCCCTATTAAAAAC +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLSSHLI*SPPIKN
Trigger: GTTTTTAATAGGGGGACTCCAGATCAGATGTGAACT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGTTTTCCATGCTGGTTaGCTAGCCAGCCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQVFHAG*LASQKQ
Trigger: CTGTTTCTGGCTGGCTAGCCAACCAGCATGGAAAAC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAATCTGTTTTCCATGCTaGTTGGCTAGCCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPICFPC*LASQPE
Trigger: TTCTGGCTGGCTAGCCAACCAGCATGGAAAACAGAT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTCGCTCTCTCACAAATaGATTCACTCATGCATTCAT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGSLSHK*IHSCIH
Trigger: ATGAATGCATGAGTGAATCCATTTGTGAGAGAGCGA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAAGCCTTACTGCACACTaGAGGTGCTTAGCCAAGATT +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPSLTAH*RCLAKI
Trigger: AATCTTGGCTAAGCACCTCCAGTGTGCAGTAAGGCT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAAGGGGGCAGTGTAATTaGCAACCATCTTGTTTGACC +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPRGQCN*QPSCLT
Trigger: GGTCAAACAAGATGGTTGCCAATTACACTGCCCCCT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGACCTCTGCTTACTTATaGTTTCTGCAGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLTSAYL*FLQLSL
Trigger: AAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCACCTCTGCTTACTTATaGTTTCTGCAGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGTSAYL*FLQLSL
Trigger: AAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTGCCATGTTGCCACATaGTTCTGGCTACCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQCHVAT*FWLPCG
Trigger: ACCACAAGGTAGCCAGAACCATGTGGCAACATGGCA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCAGAGTAGAAAGGAGTTaGAGTGTACCAATGCGAGGC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFRVERS*SVPMRG
Trigger: GCCTCGCATTGGTACACTCCAACTCCTTTCTACTCT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375340.10
ENST00000675504.1
3UTR CAA 72 bp TCCTTCAGTTCATCCTCCACCTTGTCCATACGCTTCTaGTCCTTCTCGATCTCCTTGTTCTTTGAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SFSSSSTLSIRF*SFSISLFFEAS
Trigger: ACTGGCCTCAAAGAACAAGGAGATCGAGAAGGACAAGAAGCGTATGGACAAGGTGGAGGATGAACTGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR TCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAATGGCGGTGAACCTCTaGAATGGTCCGATAATCTGT +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLMAVNL*NGPIIC
Trigger: ACAGATTATCGGACCATTTCAGAGGTTCACCGCCAT...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322213.9
ENST00000375340.10
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCAGAGTAGACCATGCTaGCAAAGGCCCGGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLQSRPC*QRPGWQ
Trigger: CTGCCAACCGGGCCTTTGTCAGCATGGTCTACTCTG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CTTGGCTGCTTCCAGCTTCTTGATTTTGTGGGAGGTGTTCTCCTTGGCTTTGATGATCTCCTTGTTCTTTaGGGCCAGTTCCTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LGCFQLLDFVGGVLLGFDDLLVL*GQFLVE
Trigger: CTCAACAAGGAACTGGCCTCAAAGAACAAGGAGATC...ATCAAAGCCAAGGAGAACACCTCCCACAAAATCAAGAAGCTGGAAGCAGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR TCA 90 bp CTTGGCTGCTTCCAGCTTCTTGATTTTGTGGGAGGTGTTCTCCTTGGCTTTGATTTGGCTTTGATGTACTaGGGCCGCTTCTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: LGCFQLLDFVGGVLLGFDLALMY*GRFWFN
Trigger: ATTGAACCAGAAGCGGCCTCAGTACATCAAAGCCAA...ATCAAAGCCAAGGAGAACACCTCCCACAAAATCAAGAAGCTGGAAGCAGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR TCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATTGGCTTTGATGTACTaGGGCCGCTTCTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLLALMY*GRFWFN
Trigger: ATTGAACCAGAAGCGGCCTCAGTACATCAAAGCCAA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTACTGCTTCCAGCTTCTTaGTTTTGTGGGAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLLLPAS*FCGRCS
Trigger: AGAACACCTCCCACAAAATCAAGAAGCTGGAAGCAG...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACCCGCAGCTTTTGCTTaGTCTTGGCCTCTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLPAAFA*SWPLSL
Trigger: TAGAGACAGAGGCCAAGATCAAGCAAAAGCTGCGGG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCATTCTCAATCCGCTTCTaGTTCTCTTCAATTTCCCGC +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPFSIRF*FSSISR
Trigger: GCGGGAAATTGAAGAGAATCAGAAGCGGATTGAGAA...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTTCTCAATCCGCTTCTaGTTCTCTTCAATTTCCCGC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFFSIRF*FSSISR
Trigger: GCGGGAAATTGAAGAGAATCAGAAGCGGATTGAGAA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACCCCACGCTGCTCCTTaGTATACTGAATACAGTCCC +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLPHAAP*YTEYSP
Trigger: GGGACTGTATTCAGTATATCAAGGAGCAGCGTGGGG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTCCCTCTCTCGGCTCTaGATGATCCTCTTGATATCA +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQSLSRL*MILLIS
Trigger: TGATATCAAGAGGATCATTCAGAGCCGAGAGAGGGA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGTTCCTCTTCATGCTTaGTTAGCAGTGCCTAAATCC +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPVPLHA*LAVPKS
Trigger: GGATTTAGGCACTGCTAATCAAGCATGAAGAGGAAC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAGGAGAACAGCAAAGGTaGCCTTTAAAGGGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLGEQQR*PLKGCE
Trigger: TTCACAGCCCTTTAAAGGTCACCTTTGCTGTTCTCC...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCACAACGGTTGCCCTGTaGTGCCAGGAGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLTTVAL*CQEVVG
Trigger: CCCCACCACCTCCTGGCATCACAGGGCAACCGTTGT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCACGGGCACATACAGCATaGACATCTAACCTAATCTGT +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPRAHTA*TSNLIC
Trigger: ACAGATTAGGTTAGATGTTCATGCTGTATGTGCCCG...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCAGGAATTCCAGTTGCTaGGGAGGATGTAAGCAGATT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFRNSSC*GGCKQI
Trigger: AATCTGCTTACATCCTCCTCAGCAACTGGAATTCCT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCTTCCCTTACAAGTCTaGCATTCTGGGTATCTCACT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFLPLQV*HSGYLT
Trigger: AGTGAGATACCCAGAATGTCAGACTTGTAAGGGAAG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGCCACCCCTGTAAGGTaGAGTCCTTATGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSATPVR*SPYASP
Trigger: TGGACTGGCATAAGGACTTCACCTTACAGGGGTGGC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTATACAAATGTCTCATaGCCTCTGCTTACTTATGGT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGYTNVS*PLLTYG
Trigger: ACCATAAGTAAGCAGAGGTCATGAGACATTTGTATA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGCCTCTTCTTTCTCCTaGTTTGCTTCCTTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQASSFS*FASLRS
Trigger: TGAACGCAAGGAAGCAAAGCAGGAGAAAGAAGAGGC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AGAGACTTCTTGGCTGCTTCCAGCTTCTTGATTTTGTGGGAGGTGTTCTCCTTGCCAACGTCAAATCTCTaGCCTGACTCTGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: RDFLAASSFLILWEVFSLPTSNL*PDSDSL
Trigger: AAGAGAGTCAGAGTCAGGGCAGAGATTTGACGTTGG...CAAGGAGAACACCTCCCACAAAATCAAGAAGCTGGAAGCAGCCAAGAAGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCTGGGCCAGGGTAGCTaGTCTCTTGCTGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLGQGS*SLAGFF
Trigger: GAAGAAGCCAGCAAGAGAGCAGCTACCCTGGCCCAG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCATGCTCTTCTAGGGACTaGTTGCTAGTGGTGATGTAT +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPCSSRD*LLVVMY
Trigger: ATACATCACCACTAGCAAGCAGTCCCTAGAAGAGCA...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTGCTCTTCTAGGGACTaGTTGCTAGTGGTGATGTAT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFCSSRD*LLVVMY
Trigger: ATACATCACCACTAGCAAGCAGTCCCTAGAAGAGCA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCATGGCATCCATGTTCTTaGCCAAAACCTTGGTTACAG +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPWHPCS*PKPWLQ
Trigger: CTGTAACCAAGGTTTTGGGCAAGAACATGGATGCCA...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAGGCAACTTAATGTCCTaGATCTTACAGGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLGNLMS*ILQACS
Trigger: GCTACAGGCCTGTAAGATGCAGGACATTAAGTTGCC...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCAGTGTGTTCATCTCTTaGTTGATCTCTTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFSVFIS*LISSSA
Trigger: GGCTGAGGAAGAGATCAAGCAAGAGATGAACACACT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTACTTGATCTGTTCGAATaGCTGCTTGGCCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLLDLFE*LLGLLC
Trigger: GCAAAGAAGGCCAAGCAGGCATTCGAACAGATCAAG...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGGTCCTGAGTACCTTTaGCCAGCTCAGGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLGPEYL*PAQGCC
Trigger: ACAGCACCCCTGAGCTGGGCAAAGGTACTCAGGACC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTTGGAAACACTGTGGTaGCCAGCCTCCCGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSLETLW*PASREH
Trigger: ATGCTCACGGGAGGCTGGGCACCACAGTGTTTCCAA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGATTTCCAGAGGGAAGTaGCCAGTTAAACTTAAGATA +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLISRGK*PVKLKI
Trigger: TATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGCCTTCATGTCTTCATaGATACTGTTTCCAATATCT +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLAFMSS*ILFPIS
Trigger: AGATATTGGAAACAGTATGCATGAAGACATGAAGGC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTTGCCATTTGATACATaGCACCCCTGTAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFLPFDT*HPCKVK
Trigger: CTTCACCTTACAGGGGTGGCATGTATCAAATGGCAA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGCCCATGGCTTTTTCTaGCTCATGGGTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSAHGFF*LMGPAA
Trigger: AGCTGCAGGACCCATGAGGCAGAAAAAGCCATGGGC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAGGTGAACCTCTGAAATaGTCCGATAATCTGTCGACC +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLGEPLK*SDNLST
Trigger: GGTCGACAGATTATCGGACCATTTCAGAGGTTCACC...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322213.9
ENST00000375340.10
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGTCTTGTGGCGCTGGTaGCCTCCAAAGGCAATGCGG +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQVLWRW*PPKAMR
Trigger: CCGCATTGCCTTTGGAGGCCACCAGCGCCACAAGAC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTAGTGCCACTGTCTTGTaGCGCTGGTGGCCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLSATVL*RWWPPK
Trigger: CTTTGGAGGCCACCAGCGCCACAAGACAGTGGCACT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGCTCACTCTCCAGCTTaGATTTTTCCTGCAGATTCA +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPAHSPA*IFPADS
Trigger: TGAATCTGCAGGAAAAATCCAAGCTGGAGAGTGAGC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCATCACTTCCGACTTCTTaGCCAGATGCTGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPSLPTS*PDADSS
Trigger: TGAAGAATCAGCATCTGGCCAAGAAGTCGGAAGTGA...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTACAAGCTTGGTCTCAATaGCTGTCACCTCCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLQAWSQ*LSPPSV
Trigger: TACAGAAGGAGGTGACAGCCATTGAGACCAAGCTTG...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGCTTGTAGCTGTGGATaGCAAAGAGCAGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSACSCG*QRAGPE
Trigger: CTCTGGCCCTGCTCTTTGCCATCCACAGCTACAAGC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACACATCCTTTGGATGTaGGGGTGCAAGCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLHILWM*GCKQGT
Trigger: AGTTCCCTGCTTGCACCCCCACATCCAAAGGATGTG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGAGCTCCACATCCTTTaGATGTGGGGGTGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSELHIL*MWGCKQ
Trigger: CTGCTTGCACCCCCACATCCAAAGGATGTGGAGCTC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCTCTTGGAAACACTGTaGTGCCCAGCCTCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLLETL*CPASRE
Trigger: CTCACGGGAGGCTGGGCACCACAGTGTTTCCAAGAG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTGGCTGTTTTACAAATaGTTTCCCCAACTAAACAGT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGWLFYK*FPQLNS
Trigger: ACTGTTTAGTTGGGGAAACCATTTGTAAAACAGCCA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATGCCGTACCTGTTTGTaGTATACAGCCAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLCRTCL*YTASLG
Trigger: TCCCAAACTGGCTGTATACCACAAACAGGTACGGCA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAAGCCTTACTGCACACTaGAGGTGCTTAGCCAAGATT +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLSLTAH*RCLAKI
Trigger: AATCTTGGCTAAGCACCTCCAGTGTGCAGTAAGGCT...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCCTAGCTTCCATTTCTaGCTCCAACACTTCCTAGCA +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQPSFHF*LQHFLA
Trigger: TGCTAGGAAGTGTTGGAGCCAGAAATGGAAGCTAGG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGTGCCTTGCTGCTTCATaGCTTCTGCCACCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKCLAAS*LLPPCG
Trigger: GCCACAGGGTGGCAGAAGCCATGAAGCAGCAAGGCA...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGGCGAGAGAGGACGCTaGGCTGAAACAGAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLGERGR*AETEVH
Trigger: GTGCACTTCTGTTTCAGCCCAGCGTCCTCTCTCGCC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675504.1
CDS-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGGCATCCATGAGATTTaGCTTACCAGAGCCATTGGG +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLGIHEI*LTRAIG
Trigger: CCCAATGGCTCTGGTAAGTCAAATCTCATGGATGCC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322213.9
CDS-3UTR TCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCGGACCACTTTGTTGTTaGTCTTGTACTCAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFGPLCC*SCTQKN
Trigger: GTTCTTCTGAGTACAAGATCAACAACAAAGTGGTCC...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCATGGTATTTCTTCACCTaGTTCTCCTCCAACGTCAAA +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPWYFFT*FSSNVK
Trigger: TTTGACGTTGGAGGAGAATCAGGTGAAGAAATACCA...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGCTGGCATAGGTCAATaGGGCGGCCGTACACAGAGC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLAGIGQ*GGRTQS
Trigger: GCTCTGTGTACGGCCGCCTCATTGACCTATGCCAGC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCACTCTGGGAGTACTTaGGCCGCATCTGCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKHSGST*AASAVH
Trigger: ATGGACTGCAGATGCGGCTCAAGTACTCCCAGAGTG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTTTTCAAAATCCAACTaGATGCCCAAGCGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFFSKSN*MPKRVF
Trigger: GAAGACTCGCTTGGGCATTCAGTTGGATTTTGAAAA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAATCTCCTCCATCTCATaGTTCTTGTCATTCACTTCC +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPISSIS*FLSFTS
Trigger: GGAAGTGAATGACAAGAATCATGAGATGGAGGAGAT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATGTTCATCTCTTGCTTaGTCTCTTCCTCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLCSSLA*SLPQPG
Trigger: CCCAGGCTGAGGAAGAGATCAAGCAAGAGATGAACA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAATTCAAAACAAGCATTaGAGCGGTCAAAGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLIQNKH*SGQSAP
Trigger: AGGAGCGCTTTGACCGCTTCAATGCTTGTTTTGAAT...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAGTTCCTCTTCATGCTTaGTTAGCAGTGCCTAAATCC +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLVPLHA*LAVPKS
Trigger: GGATTTAGGCACTGCTAATCAAGCATGAAGAGGAAC...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTCCAAGCACAGAGCCTaGCAAATAGAGGGTGTTCGG +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSSKHRA*QIEGVR
Trigger: CCGAACACCCTCTATTTGTCAGGCTCTGTGCTTGGA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTACGGGCACATACAGCATaGACATCTAACCTAATCTGT +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLRAHTA*TSNLIC
Trigger: ACAGATTAGGTTAGATGTTCATGCTGTATGTGCCCG...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCAGTAGTGTAAGAAGCTaGTTAACAGGGAAGCTACAG +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFSSVRS*LTGKLQ
Trigger: CTGTAGCTTCCCTGTTAATCAGCTTCTTACACTACT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCTGTGGCCAGGATTGTaGGGTCACATGGTACAGAGC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKLWPGL*GHMVQS
Trigger: GCTCTGTACCATGTGACCTCACAATCCTGGCCACAG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCTTGAAAATGGTTCATaGTCCAAAGCAGCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFLENGS*SKAALE
Trigger: CTCTAGAGCTGCTTTGGATCATGAACCATTTTCAAG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACGCTTGTCATACTCCTaGGCCAGCTCCCCAGAACGA +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQRLSYS*ASSPER
Trigger: TCGTTCTGGGGAGCTGGCGCAGGAGTATGACAAGCG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCGTTCTTCAAACTCCTaGCGAGCCTTCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSRSSNS*RAFSTD
Trigger: GTCAGTGGAGAAGGCTCGGCAGGAGTTTGAAGAACG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCCGGGCATCCCCTAGCTaGTCCATCACCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLRASPS*SITWFS
Trigger: GCTGAACCAGGTGATGGAGCAGCTAGGGGATGCCCG...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCATCTCTGCCTTTCGCTaGTGGCGGCTGCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLISAFR*WRLLSW
Trigger: CCAGGAGAGCAGCCGCCAGCAGCGAAAGGCAGAGAT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTGGCATCCATGTTCTTaGCCAAAACCTTGGTTACAG +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQWHPCS*PKPWLQ
Trigger: CTGTAACCAAGGTTTTGGGCAAGAACATGGATGCCA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCAAACTCCCGGATGTTaGGCACACCAATCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKQTPGC*AHQSPD
Trigger: GTCGGGAGATTGGTGTGCGCAACATCCGGGAGTTTG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATGCTCATTCAGCTTCTaGTGCAGTGTGTTCATCTCT +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLCSFSF*CSVFIS
Trigger: AGAGATGAACACACTGCAGCAGAAGCTGAATGAGCA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCTGCTTGGCCTTCTTTaGTCGCTTTCGGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLLGLL*SLSGCF
Trigger: GAAGCAGCCCGAAAGCGAGCAAAGAAGGCCAAGCAG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCCTGGGCACTGCTATTaGGGGACAGGGCCTTATAGA +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKPGHCY*GTGPYR
Trigger: TCTATAAGGCCCTGTCCCGCAATAGCAGTGCCCAGG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCCTCAGGGCCCAGGAATaGCTGGGCACTGCTATTGCG +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLLRAQE*LGTAIA
Trigger: CGCAATAGCAGTGCCCAGGCATTCCTGGGCCCTGAG...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTCGTTCAGGAATTTTTaGTCCAGACCTAACATCACC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFSFRNF*SRPNIT
Trigger: GGTGATGTTAGGTCTGGAGCAAAAATTCCTGAACGA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTGCCCAGCTCAGGGGTaGTGTCATCCTAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLCPAQG*CHPKLS
Trigger: AGAGAGCTTAGGATGACAGCACCCCTGAGCTGGGCA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCTGACCCCCGAATTGTaGTCGTCCATAAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLTPEL*SSIKAS
Trigger: GCTGGCCTTTATGGACGAGCACAATTCGGGGGTCAG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCTTCAGTATTTGTTTTaGTGTTTCTTGCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGLQYLF*CFLPSC
Trigger: ACATGAAGGCAAGAAACAGCAAAACAAATACTGAAG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTATTCCTACTGGCCTTTaGCCTAGTGCAGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLIPTGL*PSAGLL
Trigger: CAGGAGGCCTGCACTAGGGCAAAGGCCAGTAGGAAT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATGTCACCCCCTCAGCTaGAGGCATCTGTTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQCHPLS*RHLLLP
Trigger: AGGGAGCAACAGATGCCTGCAGCTGAGGGGGTGACA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGTCATCCTTCAGGCGCTaGTACCGGTCAGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKSSFRR*YRSASS
Trigger: AGAAGAGGCTGACCGGTACCAGCGCCTGAAGGATGA...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATCCTGGTCAGCTTTCTaGTCTCGATTGAATTTCTCC +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLSWSAF*SRLNFS
Trigger: GGAGAAATTCAATCGAGACCAGAAAGCTGACCAGGA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATTCTTTTGTGTGGGCTaGCATAGGTCAATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLFFCVG*HRSMRR
Trigger: CCGCCTCATTGACCTATGCCAGCCCACACAAAAGAA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGATCACTCCTGACTTCTaGAATAGGGTTCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQITPDF*NRVPSS
Trigger: ACTGGATGGAACCCTATTCCAGAAGTCAGGAGTGAT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCCATGGCCTTCATGTTaGGGGCGGCAATACGCTGAA +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLPWPSC*GRQYAE
Trigger: TTCAGCGTATTGCCGCCCCCAACATGAAGGCCATGG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTTTCCAGCTTTTCCATaGCCTTCATGTTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSFPAFP*PSCWGR
Trigger: CCGCCCCCAACATGAAGGCCATGGAAAAGCTGGAAA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGACGAAGAAGGGGGCTaGCTTGTAGCTGTGGATGGC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQDEEGG*LVAVDG
Trigger: GCCATCCACAGCTACAAGCCAGCCCCCTTCTTCGTC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCACTGCTACTGCTCATTaGGGTTGGGGTTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSTATAH*GWGWHL
Trigger: CAGATGCCAACCCCAACCCCAATGAGCAGTAGCAGT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAGCATTTGCCAAATTATaGCACACAGTACCACCAGTG +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLAFAKL*HTVPPV
Trigger: CACTGGTGGTACTGTGTGCCATAATTTGGCAAATGC...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGGGTTCAAACCTTTTTaGGCCTCAGTTTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPGFKPF*ASVSLS
Trigger: AGATAAGGAAACTGAGGCCCAAAAAGGTTTGAACCC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGTTGATCACACTGTATaGTTAATGGCTGTTTTACAA +
Preference number: 4 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLVDHTV*LMAVLQ
Trigger: TTGTAAAACAGCCATTAACCATACAGTGTGATCAAC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATGCCTTGCTGCTTCATaGCTTCTGCCACCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLCLAAS*LLPPCG
Trigger: GCCACAGGGTGGCAGAAGCCATGAAGCAGCAAGGCA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGTTGCCACATGGTTCTaGCTACCTTGTGGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLVATWF*LPCGSC
Trigger: GCAAGAACCACAAGGTAGCCAGAACCATGTGGCAAC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGCTTTTTCTGCCTCATaGGTCCTGCAGCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSAFSAS*VLQLHG
Trigger: GCCATGAAGCTGCAGGACCCATGAGGCAGAAAAAGC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 72 bp CCATGTTGCCACATGGTTCTGGCTACCTTGTGGTTCTaGCAGTCTCATCGCTTCTACTGTCTCATGATCTTA +
Preference number: 4 (lower is better)
Translates to: PCCHMVLATLWF*QSHRFYCLMIL
Trigger: TAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAAGGTAGCCAGAACCATGTGGCAACATGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCAGCTGCAGCTGTACCTaGGCCCGTACTACCTCATCC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSCSCT*ARTTSS
Trigger: GGATGAGGTAGTACGGGCTCAGGTACAGCTGCAGCT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTTGGTTACAGCAATCTaGTACTTCTTTTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQLVTAI*YFFCVG
Trigger: GCCCACACAAAAGAAGTATCAGATTGCTGTAACCAA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCCATGGTCTCATCTATaGTCTTCATGTGTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFPWSHL*SSCVFV
Trigger: AACAAAGACACATGAAGATCATAGATGAGACCATGG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTGTCTTCTCCCCGCCTaGCAAGTTGTCCATAGGCCG +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLCLLPA*QVVHRP
Trigger: CGGCCTATGGACAACTTGTCAGGCGGGGAGAAGACA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAAAGTCGACTGCTCCTTaGTGTAATTTGCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLKSTAP*CNLPPC
Trigger: GCAAGGTGGCAAATTACATCAAGGAGCAGTCGACTT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCATCTGGGTACTTGGTaGGGTCGAAGGTCAGGACTT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLHLGTW*GRRSGL
Trigger: AAGTCCTGACCTTCGACCTCACCAAGTACCCAGATG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAACACAAATGAGTGAATaGAGGCAGTTTCAGGTAACT +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPTQMSE*RQFQVT
Trigger: AGTTACCTGAAACTGCCTTCATTCACTCATTTGTGT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTCCAAGCACAGAGCCTaGCAAATAGAGGGTGTTCGG +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLSKHRA*QIEGVR
Trigger: CCGAACACCCTCTATTTGTCAGGCTCTGTGCTTGGA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATCCACTCCTAGTGCCTaGCCAAATCCTACCAATTTG +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLSTPSA*PNPTNL
Trigger: CAAATTGGTAGGATTTGGTCAGGCACTAGGAGTGGA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATCAGGGGTCCAGGCATaGGGGTTATATTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQSGVQA*GLYSEG
Trigger: CCCCTCAGAATATAACCCTCATGCCTGGACCCCTGA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGCCACCCCTGTAAGGTaGAGTCCTTATGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLATPVR*SPYASP
Trigger: TGGACTGGCATAAGGACTTCACCTTACAGGGGTGGC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAAACGTTCACTTCTTCTaGATAGCTCACATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLNVHFF*IAHILP
Trigger: AGGCAGAATGTGAGCTATTCAGAAGAAGTGAACGTT...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACTGGAGCGCTGGGTCTaGAATTCAAAAGTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQLERWV*NSKVPP
Trigger: AGGCGGCACTTTTGAATTTCAGACCCAGCGCTCCAG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGCTCCCGCATCATTTTaGCCAGCTCCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSAPASF*PAPSSS
Trigger: AGAAGAAGAAGGAGCTGGGCAAAATGATGCGGGAGC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACCAACGTCAAATCTCTaGCCTGACTCTGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLPTSNL*PDSDSL
Trigger: AAGAGAGTCAGAGTCAGGGCAGAGATTTGACGTTGG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGCTTTCCATTATCTCTaGCTTTCGCTGCTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLAFHYL*LSLLAA
Trigger: AGCCGCCAGCAGCGAAAGGCAGAGATAATGGAAAGC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCACAGACAAGGGCATTaGCACAAGCATACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLHRQGH*HKHTAG
Trigger: CCCTGCAGTATGCTTGTGGCAATGCCCTTGTCTGTG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACAAACTCCCGGATGTTaGGCACACCAATCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQQTPGC*AHQSPD
Trigger: GTCGGGAGATTGGTGTGCGCAACATCCGGGAGTTTG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTACTGCTTGGCCTTCTTTaGTCGCTTTCGGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLLLGLL*SLSGCF
Trigger: GAAGCAGCCCGAAAGCGAGCAAAGAAGGCCAAGCAG...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCATCTGTTCGAATGCCTaGTTGGCCTTCTTTGCTCGC +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSICSNA*LAFFAR
Trigger: GCGAGCAAAGAAGGCCAAGCAGGCATTCGAACAGAT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGGTAGACCCCATCAGTaGCCTGAAACTTTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLGRPHQ*PETFPV
Trigger: GACTGGGAAAGTTTCAGGGCACTGATGGGGTCTACC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCGCACCCGGCTTTGCTaGCTCTGCATGATCCTTATA +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLRTRLC*LCMILI
Trigger: TATAAGGATCATGCAGAGGCAGCAAAGCCGGGTGCG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACTTTGGATGTGGGGGTaGAAGCAGGGAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQLWMWG*KQGTAA
Trigger: AGCAGCAGTTCCCTGCTTGCACCCCCACATCCAAAG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTACATGTGTTCCTGTGTaGCAGGGCCTTAGCCTAAGG +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLTCVPV*QGLSLR
Trigger: CCTTAGGCTAAGGCCCTGGCACACAGGAACACATGT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCCCCAGGAATCTTCATaGTTCAGTATTTGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFPQESS*FSICFA
Trigger: AGCAAAACAAATACTGAAGCATGAAGATTCCTGGGG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCCTCGTGGCTCCTATTaGTTCATGGCTTCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKPRGSY*FMASSP
Trigger: TGGGCTAGAAGCCATGAAGCAATAGGAGCCACGAGG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCCTCGTGGCTCCTATTaGTTCATGGCTTCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLPRGSY*FMASSP
Trigger: TGGGCTAGAAGCCATGAAGCAATAGGAGCCACGAGG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCTGTACTCATGTAGTTaGACCACTTTGTTGTTGATC +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFLYSCS*TTLLLI
Trigger: GATCAACAACAAAGTGGTCCAACTACATGAGTACAG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGATTCCACAGCACCCTaGAAAACGAGGAAGTTACGA +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLDSTAP*KTRKLR
Trigger: TCGTAACTTCCTCGTTTTCCAGGGTGCTGTGGAATC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTCTTGCCCAAAACCTTaGTTACAGCAATCTGATACT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFSCPKP*LQQSDT
Trigger: AGTATCAGATTGCTGTAACCAAGGTTTTGGGCAAGA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTGGCCTTCAGGTCACTaGCCCCACCAGAGATCACTC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLWPSGH*PHQRSL
Trigger: GAGTGATCTCTGGTGGGGCCAGTGACCTGAAGGCCA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATGCGAGGCCCAAAGTTaGCTAGCTCACTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQCEAQS*LAHSPA
Trigger: AGCTGGAGAGTGAGCTAGCCAACTTTGGGCCTCGCA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGGGTCATTTCCTTGTTaGCGCCCCCGAGTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLGSFPC*RPRVSY
Trigger: GTAAGAAACTCGGGGGCGCCAACAAGGAAATGACCC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACAAGCTTGGTCTCAATaGCTGTCACCTCCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLQAWSQ*LSPPSV
Trigger: TACAGAAGGAGGTGACAGCCATTGAGACCAAGCTTG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTACTCGTGCATAGATACTaGAAATTCTCTGTGAACCAC +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLLVHRY*KFSVNH
Trigger: GTGGTTCACAGAGAATTTCCAGTATCTATGCACGAG...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCATCTCTTCCTCAGCCTaGGCATCCTTCAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSISSSA*ASFRSS
Trigger: TGAGGATCTGAAGGATGCCCAGGCTGAGGAAGAGAT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGAGATGACGATGGCCTaGAAGTTGCAAGTCGACTGC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLEMTMA*KLQVDC
Trigger: GCAGTCGACTTGCAACTTCCAGGCCATCGTCATCTC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTACTGCTACTGCTCATTaGGGTTGGGGTTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLTATAH*GWGWHL
Trigger: CAGATGCCAACCCCAACCCCAATGAGCAGTAGCAGT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTGTGTGATGAACAGATaGCCCTGTTCAGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSCVMNR*PCSAQH
Trigger: GTGCTGAGCTGAACAGGGCCATCTGTTCATCACACA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTCTGTCCCTAATAGCTaGGATCAGAAGCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSSVPNS*DQKLSG
Trigger: CCCTGAGAGCTTCTGATCCCAGCTATTAGGGACAGA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCACATCCTTTGGATGTaGGGGTGCAAGCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKHILWM*GCKQGT
Trigger: AGTTCCCTGCTTGCACCCCCACATCCAAAGGATGTG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGAGCTCCACATCCTTTaGATGTGGGGGTGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQELHIL*MWGCKQ
Trigger: CTGCTTGCACCCCCACATCCAAAGGATGTGGAGCTC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGAGCTCCACATCCTTTaGATGTGGGGGTGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLELHIL*MWGCKQ
Trigger: CTGCTTGCACCCCCACATCCAAAGGATGTGGAGCTC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGATCCAGCTTGCTCTTaGAAACACTGTGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKDPACS*KHCGAQ
Trigger: CTGGGCACCACAGTGTTTCCAAGAGCAAGCTGGATC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCACTTAAGATACTGTTGTaGAGTACTCTTCAACTCCCT +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPLKILL*STLQLP
Trigger: AGGGAGTTGAAGAGTACTCCACAACAGTATCTTAAG...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAATCTGTTTTCCATGCTaGTTGGCTAGCCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLICFPC*LASQPE
Trigger: TTCTGGCTGGCTAGCCAACCAGCATGGAAAACAGAT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTCGCTCTCTCACAAATaGATTCACTCATGCATTCAT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFSLSHK*IHSCIH
Trigger: ATGAATGCATGAGTGAATCCATTTGTGAGAGAGCGA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTAGGGAGTCAGAGTCCTaGCTTGGAAGAGCCTTACTG +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLRESES*LGRALL
Trigger: CAGTAAGGCTCTTCCAAGCCAGGACTCTGACTCCCT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTTGCTGTTTAGTTTCTaGCCACCCCTCATCCACCAC +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSLLFSF*PPLIHH
Trigger: GTGGTGGATGAGGGGTGGCCAGAAACTAAACAGCAA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTGCCTTGCTGCTTCATaGCTTCTGCCACCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLCLAAS*LLPPCG
Trigger: GCCACAGGGTGGCAGAAGCCATGAAGCAGCAAGGCA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGTTCTGGCTACCTTGTaGTTCTTGCAGTCTCATCGC +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSVLATL*FLQSHR
Trigger: GCGATGAGACTGCAAGAACCACAAGGTAGCCAGAAC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTGCCATGTTGCCACATaGTTCTGGCTACCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSCHVAT*FWLPCG
Trigger: ACCACAAGGTAGCCAGAACCATGTGGCAACATGGCA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAGACTCAACTCCTTTCTaGCTGTATTTATACTCCTCC +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLDSTPF*LYLYSS
Trigger: GGAGGAGTATAAATACAGCCAGAAAGGAGTTGAGTC...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 72 bp TCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTaGTGGAGTACTCTTCAACTCCCTACAGCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: SRGKCPVKLKIL*WSTLQLPTARL
Trigger: TAGCCTTGCTGTAGGGAGTTGAAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 72 bp CCTTACTGCACACTGGAGGTGCTTAGCCAAGATTTATaGAACTGGATGAATGAATCAATGGCTTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PYCTLEVLSQDL*NWMNESMACGG
Trigger: CCCTCCACAAGCCATTGATTCATTCATCCAGTTCAATAAATCTTGGCTAAGCACCTCCAGTGTGCAGTAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTAAGAACCTCCTACAATaGCACGGGCAAAGGTACGGT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLKNLLQ*HGQRYG
Trigger: ACCGTACCTTTGCCCGTGTCATTGTAGGAGGTTCTT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGATCTCCTTGTTCTTTaGGGCCAGTTCCTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSDLLVL*GQFLVE
Trigger: CTCAACAAGGAACTGGCCTCAAAGAACAAGGAGATC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCTGAGTCCTTCTCCTTaGTCTCCTTCTCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSLSPSP*SPSQSA
Trigger: AGCAGATTGAGAAGGAGATCAAGGAGAAGGACTCAG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCTGCTTCCAGCTTCTTaGTTTTGTGGGAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSLLPAS*FCGRCS
Trigger: AGAACACCTCCCACAAAATCAAGAAGCTGGAAGCAG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCTTTCTGGTCTCGATTaGATTTCTCCAGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLSGLD*ISPAPG
Trigger: CCCAGGAGCTGGAGAAATTCAATCGAGACCAGAAAG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTGCTCCTTGATATACTaGATACAGTCCCGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLCSLIY*IQSRPV
Trigger: GACAGGCCGGGACTGTATTCAGTATATCAAGGAGCA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGACTGCAGGGCCTTTTTaGTATGAGGTGGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKTAGPF*YEVAHS
Trigger: GCTATGAGCCACCTCATATCAAAAAGGCCCTGCAGT...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCCCAAGCGAGTCTTCTaGTTCTCAAACTCCAAACGC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKPKRVF*FSNSKR
Trigger: GCGTTTGGAGTTTGAGAATCAGAAGACTCGCTTGGG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCCACACAGTTGTAGTTaGTGCCATCCAAGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKPHSCS*CHPSRA
Trigger: AGCCCTACTTGGATGGCATCAACTACAACTGTGTGG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAAGGTCAGGACTTTGCTaGTCACACAGTCCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLRSGLC*SHSPLA
Trigger: AGCAAGGGGACTGTGTGATCAGCAAAGTCCTGACCT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAGGTAGAGATCATGTCTaGTTCAACTCTGTATTCCAA +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLGRDHV*FNSVFQ
Trigger: TTGGAATACAGAGTTGAATCAGACATGATCTCTACC...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAAACTATAGTCATTCATaGACCCACTGTATCTCCTTA +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPNYSHS*THCISL
Trigger: TAAGGAGATACAGTGGGTTCATGAATGACTATAGTT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCAGGGGTCCAGGCATaGGGGTTATATTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSGVQA*GLYSEG
Trigger: CCCCTCAGAATATAACCCTCATGCCTGGACCCCTGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCACACATCAAACCTGTaGTTTCACAGATATCACTAC +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQHTSNL*FHRYHY
Trigger: GTAGTGATATCTGTGAAATCACAGGTTTGATGTGTG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGAGAAAGCACTTGAATaGCTTGGAAGACCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSEKALE*LGRPGF
Trigger: GAACCCAGGTCTTCCAAGTCATTCAAGTGCTTTCTC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGGCAACCATCTTGTTTaGCCTGTCCAATACATTGAC +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLGNHLV*PVQYID
Trigger: GTCAATGTATTGGACAGGTCAAACAAGATGGTTGCC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCCTGTGGCCAGGATTGTaGGGTCACATGGTACAGAGC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLLWPGL*GHMVQS
Trigger: GCTCTGTACCATGTGACCTCACAATCCTGGCCACAG...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCACCCTGTGGCTCCGTaGTCTCATTATACAAATGTC +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSHPVAP*SHYTNV
Trigger: GACATTTGTATAATGAGATCACGGAGCCACAGGGTG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAGCTTCTACTGTCTCATaGTCTTATCTATTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLASTVS*SYLFKP
Trigger: AGGCTTGAATAGATAAGATCATGAGACAGTAGAAGC...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTCCTCCTACTGCTACTaGCTAACTTCTTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLSSYCY*LTSFCP
Trigger: GGGGCAGAAAGAAGTTAGTCAGTAGCAGTAGGAGGA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGGCATCCATGAGATTTaGCTTACCTCTGACATAGCG +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSGIHEI*LTSDIA
Trigger: CGCTATGTCAGAGGTAAGTCAAATCTCATGGATGCC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGCTCCCGCATCATTTTaGCCAGCTCCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLAPASF*PAPSSS
Trigger: AGAAGAAGAAGGAGCTGGGCAAAATGATGCGGGAGC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCATCTCCTTCTCAATCTaGTGCTGCTCCCGCATCATT +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSISFSI*CCSRII
Trigger: AATGATGCGGGAGCAGCAGCAGATTGAGAAGGAGAT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACACCTGACGCAGCTCTaGCTCTTTCCGTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQHLTQL*LFPFCL
Trigger: AAGGCAAAACGGAAAGAGGCAGAGCTGCGTCAGGTG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGGCAACTTAATGTCCTaGATCTTACAGGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSGNLMS*ILQACS
Trigger: GCTACAGGCCTGTAAGATGCAGGACATTAAGTTGCC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAAGTGTGTTCATCTCTTaGTTGATCTCTTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLSVFIS*LISSSA
Trigger: GGCTGAGGAAGAGATCAAGCAAGAGATGAACACACT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATGCTCATTCAGCTTCTaGTGCAGTGTGTTCATCTCT +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLCSFSF*CSVFIS
Trigger: AGAGATGAACACACTGCAGCAGAAGCTGAATGAGCA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCCCTGGGCACTGCTATTaGGGGACAGGGCCTTATAGA +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLPGHCY*GTGPYR
Trigger: TCTATAAGGCCCTGTCCCGCAATAGCAGTGCCCAGG...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTGCCCAGCTCAGGGGTaGTGTCATCCTAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLCPAQG*CHPKLS
Trigger: AGAGAGCTTAGGATGACAGCACCCCTGAGCTGGGCA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACGCACCCGGCTTTGCTaGCTCTGCATGATCCTTATA +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQRTRLC*LCMILI
Trigger: TATAAGGATCATGCAGAGGCAGCAAAGCCGGGTGCG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAATTTCCAGAGGGAAGTaGCCAGTTAAACTTAAGATA +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPISRGK*PVKLKI
Trigger: TATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTACCCCAGGAATCTTCATaGTTCAGTATTTGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLPQESS*FSICFA
Trigger: AGCAAAACAAATACTGAAGCATGAAGATTCCTGGGG...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCATTCCTACTGGCCTTTaGCCTAGTGCAGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLIPTGL*PSAGLL
Trigger: CAGGAGGCCTGCACTAGGGCAAAGGCCAGTAGGAAT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTTCCTGTTGCCATGTTaGCACATGGTTCTGGCTACC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLFLLPC*HMVLAT
Trigger: GGTAGCCAGAACCATGTGGCAACATGGCAACAGGAA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGTTCCTGTTGCCATGTTaGCACATGGTTCTGGCTACC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKFLLPC*HMVLAT
Trigger: GGTAGCCAGAACCATGTGGCAACATGGCAACAGGAA...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGCCCATGGCTTTTTCTaGCTCATGGGTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLAHGFF*LMGPAA
Trigger: AGCTGCAGGACCCATGAGGCAGAAAAAGCCATGGGC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAAGATCCAGACGGTCCTaGTCAGCTTTCTGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQRSRRS*SAFWSR
Trigger: TCGAGACCAGAAAGCTGACCAGGACCGTCTGGATCT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCCATCAATACGCCGCTTaGCCATCTCCACCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLHQYAA*PSPPPL
Trigger: CAGAGGAGGTGGAGATGGCCAAGCGGCGTATTGATG...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGTTCTTTTGTGTGGGCTaGCATAGGTCAATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKFFCVG*HRSMRR
Trigger: CCGCCTCATTGACCTATGCCAGCCCACACAAAAGAA...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATCTTGCCCAAAACCTTaGTTACAGCAATCTGATACT +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLSCPKP*LQQSDT
Trigger: AGTATCAGATTGCTGTAACCAAGGTTTTGGGCAAGA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAATCACTCCTGACTTCTaGAATAGGGTTCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLITPDF*NRVPSS
Trigger: ACTGGATGGAACCCTATTCCAGAAGTCAGGAGTGAT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGGGTCATTTCCTTGTTaGCGCCCCCGAGTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLGSFPC*RPRVSY
Trigger: GTAAGAAACTCGGGGGCGCCAACAAGGAAATGACCC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGGGTCATTTCCTTGTTaGCGCCCCCGAGTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQGSFPC*RPRVSY
Trigger: GTAAGAAACTCGGGGGCGCCAACAAGGAAATGACCC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCAAGCTTGGTCTCAATaGCTGTCACCTCCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSQAWSQ*LSPPSV
Trigger: TACAGAAGGAGGTGACAGCCATTGAGACCAAGCTTG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGATCTCTTCCTCAGCCTaGGCATCCTTCAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKISSSA*ASFRSS
Trigger: TGAGGATCTGAAGGATGCCCAGGCTGAGGAAGAGAT...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCCCATGGCCTTCATGTTaGGGGCGGCAATACGCTGAA +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLPWPSC*GRQYAE
Trigger: TTCAGCGTATTGCCGCCCCCAACATGAAGGCCATGG...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGTTCGAATGCCTGCTTaGCCTTCTTTGCTCGCTTTC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLVRMPA*PSLLAF
Trigger: GAAAGCGAGCAAAGAAGGCCAAGCAGGCATTCGAAC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGAGATGACGATGGCCTaGAAGTTGCAAGTCGACTGC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLEMTMA*KLQVDC
Trigger: GCAGTCGACTTGCAACTTCCAGGCCATCGTCATCTC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGTGTGTGATGAACAGATaGCCCTGTTCAGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKCVMNR*PCSAQH
Trigger: GTGCTGAGCTGAACAGGGCCATCTGTTCATCACACA...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAACACAGTACCACCAGTaGTACGTGACTTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLTQYHQ*YVTSLV
Trigger: AACCAAAGAAGTCACGTACCACTGGTGGTACTGTGT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTCAGATTTCCAGAGGTaGGACCAGAGCAATTTATTT +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQSDFQR*DQSNLF
Trigger: AAATAAATTGCTCTGGTCCCACCTCTGGAAATCTGA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCTAAATAGATCCGAGTaGAAGTCTAGGCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSLNRSE*KSRLCH
Trigger: GTGGCAGAGCCTAGACTTCCACTCGGATCTATTTAG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGATCCAGCTTGCTCTTaGAAACACTGTGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQDPACS*KHCGAQ
Trigger: CTGGGCACCACAGTGTTTCCAAGAGCAAGCTGGATC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATTAAAAACCATTTCATaGCTCCCTCACTGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLLKTIS*LPHCLQ
Trigger: TTGAAGGCAGTGAGGGAGCCATGAAATGGTTTTTAA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCATTCAAAAACTTTACTaGGTGCCTGTTTTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFIQKLY*VPVLCQ
Trigger: CTGACACAAAACAGGCACCCAGTAAAGTTTTTGAAT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAAATCATGGCTATTCATaGGTACTCATTCTATCCTCT +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPNHGYS*VLILSS
Trigger: AGAGGATAGAATGAGTACCCATGAATAGCCATGATT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAAGGGAGTCAGAGTCCTaGCTTGGAAGAGCCTTACTG +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLRESES*LGRALL
Trigger: CAGTAAGGCTCTTCCAAGCCAGGACTCTGACTCCCT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCCTAGCTTCCATTTCTaGCTCCAACACTTCCTAGCA +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSPSFHF*LQHFLA
Trigger: TGCTAGGAAGTGTTGGAGCCAGAAATGGAAGCTAGG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAACATGGTACAGAGCATaGCAACTTATGCTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLTWYRA*QLMLRK
Trigger: TTTCCTTAGCATAAGTTGCCATGCTCTGTACCATGT...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGACATGGTACAGAGCATaGCAACTTATGCTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQTWYRA*QLMLRK
Trigger: TTTCCTTAGCATAAGTTGCCATGCTCTGTACCATGT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTTGCTGTTTAGTTTCTaGCCACCCCTCATCCACCAC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLLFSF*PPLIHH
Trigger: GTGGTGGATGAGGGGTGGCCAGAAACTAAACAGCAA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGTTGCTGTTTAGTTTCTaGCCACCCCTCATCCACCAC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKLLFSF*PPLIHH
Trigger: GTGGTGGATGAGGGGTGGCCAGAAACTAAACAGCAA...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGCTTCTGCCACCCTGTaGCTCCGTGATCTCATTATA +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLASATL*LRDLII
Trigger: TATAATGAGATCACGGAGCCACAGGGTGGCAGAAGC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGTTCTGGCTACCTTGTaGTTCTTGCAGTCTCATCGC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKVLATL*FLQSHR
Trigger: GCGATGAGACTGCAAGAACCACAAGGTAGCCAGAAC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAAAGAACCTCCTACAATaGCACGGGCAAAGGTACGGT +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLKNLLQ*HGQRYG
Trigger: ACCGTACCTTTGCCCGTGTCATTGTAGGAGGTTCTT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGATCTCCTTGTTCTTTaGGGCCAGTTCCTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLDLLVL*GQFLVE
Trigger: CTCAACAAGGAACTGGCCTCAAAGAACAAGGAGATC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCTGAGTCCTTCTCCTTaGTCTCCTTCTCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLSPSP*SPSQSA
Trigger: AGCAGATTGAGAAGGAGATCAAGGAGAAGGACTCAG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAACTGCAGGGCCTTTTTaGTATGAGGTGGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQTAGPF*YEVAHS
Trigger: GCTATGAGCCACCTCATATCAAAAAGGCCCTGCAGT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGTCCCTCTCTCGGCTCTaGATGATCCTCTTGATATCA +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKSLSRL*MILLIS
Trigger: TGATATCAAGAGGATCATTCAGAGCCGAGAGAGGGA...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTACAAAGCGCTCCTTCTTaGTCTGTTCGAATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLQSAPS*SVRMPA
Trigger: AGCAGGCATTCGAACAGATCAAGAAGGAGCGCTTTG...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCAGGTCAGGACTTTGCTaGTCACACAGTCCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLRSGLC*SHSPLA
Trigger: AGCAAGGGGACTGTGTGATCAGCAAAGTCCTGACCT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGTTCCTCTTCATGCTTaGTTAGCAGTGCCTAAATCC +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSVPLHA*LAVPKS
Trigger: GGATTTAGGCACTGCTAATCAAGCATGAAGAGGAAC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATGCCTAAGACTCCTATaGGGTCCTGAGTACCTTTGC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQCLRLL*GPEYLC
Trigger: GCAAAGGTACTCAGGACCTCATAGGAGTCTTAGGCA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATGCCTAAGACTCCTATaGGGTCCTGAGTACCTTTGC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLCLRLL*GPEYLC
Trigger: GCAAAGGTACTCAGGACCTCATAGGAGTCTTAGGCA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAAACTATAGTCATTCATaGACCCACTGTATCTCCTTA +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLNYSHS*THCISL
Trigger: TAAGGAGATACAGTGGGTTCATGAATGACTATAGTT...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGTCCACTCCTAGTGCCTaGCCAAATCCTACCAATTTG +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKSTPSA*PNPTNL
Trigger: CAAATTGGTAGGATTTGGTCAGGCACTAGGAGTGGA...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAAGTAGTGTAAGAAGCTaGTTAACAGGGAAGCTACAG +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLSSVRS*LTGKLQ
Trigger: CTGTAGCTTCCCTGTTAATCAGCTTCTTACACTACT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGGCATCCATGAGATTTaGCTTACCTCTGACATAGCG +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLGIHEI*LTSDIA
Trigger: CGCTATGTCAGAGGTAAGTCAAATCTCATGGATGCC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGATTTCCCGCAGCTTTTaGTTGATCTTGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKISRSF*LILASV
Trigger: GACAGAGGCCAAGATCAAGCAAAAGCTGCGGGAAAT...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGCTTTCCATTATCTCTaGCTTTCGCTGCTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLAFHYL*LSLLAA
Trigger: AGCCGCCAGCAGCGAAAGGCAGAGATAATGGAAAGC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTGGCATCCATGTTCTTaGCCAAAACCTTGGTTACAG +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSWHPCS*PKPWLQ
Trigger: CTGTAACCAAGGTTTTGGGCAAGAACATGGATGCCA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCGTTTTGCCTTCATCTaGTCTTTCAGCTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKRFAFI*SFSSSV
Trigger: GACAGAGGAGCTGAAAGAGCAGATGAAGGCAAAACG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTGCCTCTTTCCGTTTTaGCTTCATCTGCTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSCLFPF*LHLLFQ
Trigger: CTGAAAGAGCAGATGAAGGCAAAACGGAAAGAGGCA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATTGGCGATTTCATTCTaGCGTTTCACCTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLAISF*RFTFSS
Trigger: GGAAGAAAAGGTGAAACGGCAGAATGAAATCGCCAA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAAGTTGTGACGGTCACTaGGCTTCTGTTCAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQSCDGH*ASVQAW
Trigger: CCAAGCTTGAACAGAAGCGCAGTGACCGTCACAACT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAAGTTGTGACGGTCACTaGGCTTCTGTTCAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSCDGH*ASVQAW
Trigger: CCAAGCTTGAACAGAAGCGCAGTGACCGTCACAACT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAAATGAGGGCCTCTCGTaGATAGATACTGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLNEGLS*IDTGNS
Trigger: AGAATTTCCAGTATCTATGCACGAGAGGCCCTCATT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTGCTCATTCAGCTTCTaGTGCAGTGTGTTCATCTCT +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSCSFSF*CSVFIS
Trigger: AGAGATGAACACACTGCAGCAGAAGCTGAATGAGCA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTACTACAGCAAGGCTACTaGGTCCACAGTATAAGGGAG +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLLQQGY*VHSIRE
Trigger: CTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAG...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGCCTTCATGTCTTCATaGATACTGTTTCCAATATCT +
Preference number: 4 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQAFMSS*ILFPIS
Trigger: AGATATTGGAAACAGTATGCATGAAGACATGAAGGC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATGTTTTGCTGTTTCTTaGCTTCATGTCTTCATGCAT +
Preference number: 4 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLCFAVS*LHVFMH
Trigger: ATGCATGAAGACATGAAGGCAAGAAACAGCAAAACA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCACTTCAGTATTTGTTTTaGTGTTTCTTGCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPLQYLF*CFLPSC
Trigger: ACATGAAGGCAAGAAACAGCAAAACAAATACTGAAG...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCTTCAGTATTTGTTTTaGTGTTTCTTGCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFLQYLF*CFLPSC
Trigger: ACATGAAGGCAAGAAACAGCAAAACAAATACTGAAG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATCATGGCTCCCTCACTaGCTTCAAGCTATGGTTTCC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSWLPH*LQAMVS
Trigger: GGAAACCATAGCTTGAAGGCAGTGAGGGAGCCATGA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCTCTTCCATTCCTGTTaGCATGTTGCCACATGGTTC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLFHSC*HVATWF
Trigger: GAACCATGTGGCAACATGGCAACAGGAATGGAAGAG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGGTGAACCTCTGAAATaGTCCGATAATCTGTCGACC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLGEPLK*SDNLST
Trigger: GGTCGACAGATTATCGGACCATTTCAGAGGTTCACC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322213.9
ENST00000375340.10
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATGTTCTAGGTCACTCTaGGAGTACTTGAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLCSRSL*EYLSRI
Trigger: GATGCGGCTCAAGTACTCCCAGAGTGACCTAGAACA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGCTCACTCTCCAGCTTaGATTTTTCCTGCAGATTCA +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSAHSPA*IFPADS
Trigger: TGAATCTGCAGGAAAAATCCAAGCTGGAGAGTGAGC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCACCTCATCCTCTACCTaGTTCATCTTCTCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSTSSST*FIFSFK
Trigger: CTTGAAGGAGAAGATGAACCAGGTAGAGGATGAGGT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCACTCCAAACGCTTCTTaGCGATTTCATTCTGCCGTT +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSTPNAS*RFHSAV
Trigger: AACGGCAGAATGAAATCGCCAAGAAGCGTTTGGAGT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGCTTCTGTTCAAGCTTaGTCTCAATGGCTGTCACCT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLASVQA*SQWLSP
Trigger: AGGTGACAGCCATTGAGACCAAGCTTGAACAGAAGC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCCACCTTGCCAATGTTaGTGTTATCCAAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKPPCQC*CYPRQH
Trigger: ATGCTGCCTTGGATAACACCAACATTGGCAAGGTGG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCATGACTTGGAAGACCTaGGTTCAAACCTTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSMTWKT*VQTFLG
Trigger: GCCCAAAAAGGTTTGAACCCAGGTCTTCCAAGTCAT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCGTTGATCACACTGTATaGTTAATGGCTGTTTTACAA +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFVDHTV*LMAVLQ
Trigger: TTGTAAAACAGCCATTAACCATACAGTGTGATCAAC...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGGTATACAGCCAGTTTaGGAACCACACTGTCCTACA +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLGIQPV*EPHCPT
Trigger: TGTAGGACAGTGTGGTTCCCAAACTGGCTGTATACC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGTTTTCCATGCTGGTTaGCTAGCCAGCCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQVFHAG*LASQKQ
Trigger: CTGTTTCTGGCTGGCTAGCCAACCAGCATGGAAAAC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTATCTGTTTTCCATGCTaGTTGGCTAGCCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLICFPC*LASQPE
Trigger: TTCTGGCTGGCTAGCCAACCAGCATGGAAAACAGAT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTACTAGTGCAGGCCTCCTaGTCTTTTTCCAGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLLVQAS*SFSSLL
Trigger: TAGGAGACTGGAAAAAGACCAGGAGGCCTGCACTAG...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGTCAGAGTCCTGGCTTaGAAGAGCCTTACTGCACAC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLVRVLA*KSLTAH
Trigger: GTGTGCAGTAAGGCTCTTCCAAGCCAGGACTCTGAC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCACAAGTCTGACATTCTaGGTATCTCACTATAAGTTA +
Preference number: 4 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFTSLTF*VSHYKL
Trigger: TAACTTATAGTGAGATACCCAGAATGTCAGACTTGT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGCTTCTGCCACCCTGTaGCTCCGTGATCTCATTATA +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLASATL*LRDLII
Trigger: TATAATGAGATCACGGAGCCACAGGGTGGCAGAAGC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGCTCCTATTGCTTCATaGCTTCTAGCCCATTGTTGC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKAPIAS*LLAHCC
Trigger: GCAACAATGGGCTAGAAGCCATGAAGCAATAGGAGC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGCTCCTATTGCTTCATaGCTTCTAGCCCATTGTTGC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLAPIAS*LLAHCC
Trigger: GCAACAATGGGCTAGAAGCCATGAAGCAATAGGAGC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGGTTTCTGTTCCTCGTaGCTCCTATTGCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLGFCSS*LLLLHG
Trigger: GCCATGAAGCAATAGGAGCCACGAGGAACAGAAACC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGTTGCCACATGGTTCTaGCTACCTTGTGGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQVATWF*LPCGSC
Trigger: GCAAGAACCACAAGGTAGCCAGAACCATGTGGCAAC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGTTGCCACATGGTTCTaGCTACCTTGTGGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLVATWF*LPCGSC
Trigger: GCAAGAACCACAAGGTAGCCAGAACCATGTGGCAAC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGCTTTTTCTGCCTCATaGGTCCTGCAGCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLAFSAS*VLQLHG
Trigger: GCCATGAAGCTGCAGGACCCATGAGGCAGAAAAAGC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCCTCGATGCTAGCCCATaGCTTTTTCTGCCTCATGGG +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLLDASP*LFLPHG
Trigger: CCCATGAGGCAGAAAAAGCCATGGGCTAGCATCGAG...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAAAGCATTCTAAAGACTaGAGCGCTGGGTCTGAAATT +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLKHSKD*SAGSEI
Trigger: AATTTCAGACCCAGCGCTCCAGTCTTTAGAATGCTT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375340.10
ENST00000675504.1
3UTR CAA 72 bp AAAAGCTTTACAAACGATTCTGATGCGCAGCCAAGGTaGATAACCACCTGTACAGTGGAGAAAGCACTTGAA +
Preference number: 4 (lower is better)
Translates to: KSFTNDSDAQPR*ITTCTVEKALE
Trigger: TTCAAGTGCTTTCTCCACTGTACAGGTGGTTATCAACCTTGGCTGCGCATCAGAATCGTTTGTAAAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGGACCACTTTGTTGTTaGTCTTGTACTCAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSGPLCC*SCTQKN
Trigger: GTTCTTCTGAGTACAAGATCAACAACAAAGTGGTCC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTGGTATTTCTTCACCTaGTTCTCCTCCAACGTCAAA +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSWYFFT*FSSNVK
Trigger: TTTGACGTTGGAGGAGAATCAGGTGAAGAAATACCA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCCCCAAGCGAGTCTTCTaGTTCTCAAACTCCAAACGC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLPKRVF*FSNSKR
Trigger: GCGTTTGGAGTTTGAGAATCAGAAGACTCGCTTGGG...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATTCAGGTCTTGTAGCTaGGCCATGGTCTCATCTATG +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLFRSCS*AMVSSM
Trigger: CATAGATGAGACCATGGCTCAGCTACAAGACCTGAA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTATCCATGGTGCCTTTTaGCAGTGGCAACTTAATGTC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLIHGAF*QWQLNV
Trigger: GACATTAAGTTGCCACTGTCAAAAGGCACCATGGAT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCCGTAGTCAATCTCAATaGGGGCCTCTCGTGCATAGA +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLRSQSQ*GPLVHR
Trigger: TCTATGCACGAGAGGCCCTCATTGAGATTGACTACG...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATGCTTCAAACTCATCTaGGGTCTCCTGGAACTTGTC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQCFKLI*GLLELV
Trigger: GACAAGTTCCAGGAGACCTCAGATGAGTTTGAAGCA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATGCTTCAAACTCATCTaGGGTCTCCTGGAACTTGTC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLCFKLI*GLLELV
Trigger: GACAAGTTCCAGGAGACCTCAGATGAGTTTGAAGCA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCCAAAGCGCTCCTTCTTaGTCTGTTCGAATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLQSAPS*SVRMPA
Trigger: AGCAGGCATTCGAACAGATCAAGAAGGAGCGCTTTG...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTAGGAATTCCAGTTGCTaGGGAGGATGTAAGCAGATT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLRNSSC*GGCKQI
Trigger: AATCTGCTTACATCCTCCTCAGCAACTGGAATTCCT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCTTCCCTTACAAGTCTaGCATTCTGGGTATCTCACT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLPLQV*HSGYLT
Trigger: AGTGAGATACCCAGAATGTCAGACTTGTAAGGGAAG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGGCAACCATCTTGTTTaGCCTGTCCAATACATTGAC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKGNHLV*PVQYID
Trigger: GTCAATGTATTGGACAGGTCAAACAAGATGGTTGCC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGGCAACCATCTTGTTTaGCCTGTCCAATACATTGAC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLGNHLV*PVQYID
Trigger: GTCAATGTATTGGACAGGTCAAACAAGATGGTTGCC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTACACCCTGTGGCTCCGTaGTCTCATTATACAAATGTC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLHPVAP*SHYTNV
Trigger: GACATTTGTATAATGAGATCACGGAGCCACAGGGTG...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATGCTTCCCAAATTGGTaGCTCAACTCCTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQCFPNW*LNSFLA
Trigger: AGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATGCTTCCCAAATTGGTaGCTCAACTCCTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLCFPNW*LNSFLA
Trigger: AGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAATCTCCTTCTCAATCTaGTGCTGCTCCCGCATCATT +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLISFSI*CCSRII
Trigger: AATGATGCGGGAGCAGCAGCAGATTGAGAAGGAGAT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACCAACGTCAAATCTCTaGCCTGACTCTGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQPTSNL*PDSDSL
Trigger: AAGAGAGTCAGAGTCAGGGCAGAGATTTGACGTTGG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAATTTCCCGCAGCTTTTaGTTGATCTTGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLISRSF*LILASV
Trigger: GACAGAGGCCAAGATCAAGCAAAAGCTGCGGGAAAT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATTTCAACTTGTCTACTaGTTTCTCATCCCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLFQLVY*FLIPAP
Trigger: CGGCGCTGGGATGAGAAAGCAGTAGACAAGTTGAAA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACGTTTTGCCTTCATCTaGTCTTTCAGCTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQRFAFI*SFSSSV
Trigger: GACAGAGGAGCTGAAAGAGCAGATGAAGGCAAAACG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTTGGCGATTTCATTCTaGCGTTTCACCTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSLAISF*RFTFSS
Trigger: GGAAGAAAAGGTGAAACGGCAGAATGAAATCGCCAA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCAAAATCCAACTGAATaGCCAAGCGAGTCTTCTGAT +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSQNPTE*PSESSD
Trigger: ATCAGAAGACTCGCTTGGGCATTCAGTTGGATTTTG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCAATGAGGGCCTCTCGTaGATAGATACTGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSNEGLS*IDTGNS
Trigger: AGAATTTCCAGTATCTATGCACGAGAGGCCCTCATT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCATCTGTTCGAATGCCTaGTTGGCCTTCTTTGCTCGC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLICSNA*LAFFAR
Trigger: GCGAGCAAAGAAGGCCAAGCAGGCATTCGAACAGAT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTACTTGATCTGTTCGAATaGCTGCTTGGCCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLLDLFE*LLGLLC
Trigger: GCAAAGAAGGCCAAGCAGGCATTCGAACAGATCAAG...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCATGGCTCCCTCACTaGCTTCAAGCTATGGTTTCC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSWLPH*LQAMVS
Trigger: GGAAACCATAGCTTGAAGGCAGTGAGGGAGCCATGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTTGCCATTTGATACATaGCACCCCTGTAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLPFDT*HPCKVK
Trigger: CTTCACCTTACAGGGGTGGCATGTATCAAATGGCAA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCATTCAAGCCTTCTGCTaGTTTGTGGATCTCATAGTC +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSIQAFC*FVDLIV
Trigger: GACTATGAGATCCACAAAGCAGCAGAAGGCTTGAAT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCTACCTTGTGGTTCTTaGAGTCTCATCGCTTCTACT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLPCGS*SLIAST
Trigger: AGTAGAAGCGATGAGACTGCAAGAACCACAAGGTAG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCTACCTTGTGGTTCTTaGAGTCTCATCGCTTCTACT +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKLPCGS*SLIAST
Trigger: AGTAGAAGCGATGAGACTGCAAGAACCACAAGGTAG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACTCTTCCATTCCTGTTaGCATGTTGCCACATGGTTC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQLFHSC*HVATWF
Trigger: GAACCATGTGGCAACATGGCAACAGGAATGGAAGAG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAAATCCATGGCTTTTCTaGATTGTAGCTCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQNPWLF*IVAPAA
Trigger: GGCAGCAGGAGCTACAATGCAGAAAAGCCATGGATT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTCTGAAATTCAAAAGTaGCGCCTCCAGAGAAGAGTA +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSSEIQK*RLQRRV
Trigger: TACTCTTCTCTGGAGGCGGCACTTTTGAATTTCAGA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACTGTACTCATGTAGTTaGACCACTTTGTTGTTGATC +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLYSCS*TTLLLI
Trigger: GATCAACAACAAAGTGGTCCAACTACATGAGTACAG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTCCTGGTCAGCTTTCTaGTCTCGATTGAATTTCTCC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLSWSAF*SRLNFS
Trigger: GGAGAAATTCAATCGAGACCAGAAAGCTGACCAGGA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATCTTGCCCAAAACCTTaGTTACAGCAATCTGATACT +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLSCPKP*LQQSDT
Trigger: AGTATCAGATTGCTGTAACCAAGGTTTTGGGCAAGA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACTTTTTGATATGAGGTaGCTCATAGCGAATCACATC +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLFDMR*LIANHI
Trigger: GATGTGATTCGCTATGAGCCACCTCATATCAAAAAG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTATCACTCCTGACTTCTaGAATAGGGTTCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLITPDF*NRVPSS
Trigger: ACTGGATGGAACCCTATTCCAGAAGTCAGGAGTGAT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCTAGATGTCGTGTCTTaGTCTGTTCTAGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLDVVS*SVLGHS
Trigger: AGAGTGACCTAGAACAGACCAAGACACGACATCTAG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGCTTCTGTTCAAGCTTaGTCTCAATGGCTGTCACCT +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQASVQA*SQWLSP
Trigger: AGGTGACAGCCATTGAGACCAAGCTTGAACAGAAGC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCTGTCCCTAATAGCTaGGATCAGAAGCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSVPNS*DQKLSG
Trigger: CCCTGAGAGCTTCTGATCCCAGCTATTAGGGACAGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGGGTTCAAACCTTTTTaGGCCTCAGTTTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSGFKPF*ASVSLS
Trigger: AGATAAGGAAACTGAGGCCCAAAAAGGTTTGAACCC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTATGACTTGGAAGACCTaGGTTCAAACCTTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLMTWKT*VQTFLG
Trigger: GCCCAAAAAGGTTTGAACCCAGGTCTTCCAAGTCAT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACTAAATAGATCCGAGTaGAAGTCTAGGCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQLNRSE*KSRLCH
Trigger: GTGGCAGAGCCTAGACTTCCACTCGGATCTATTTAG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGACCCTCTTCCAATCTaGTTCCTCTCTACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLDPLPI*FLSTFS
Trigger: AGAAAAGGTAGAGAGGAACCAGATTGGAAGAGGGTC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATTAAAAACCATTTCATaGCTCCCTCACTGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLKTIS*LPHCLQ
Trigger: TTGAAGGCAGTGAGGGAGCCATGAAATGGTTTTTAA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGAAGGAAAGAGATGACTaGGACAGGGTAGGAATCATG +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKKERDD*DRVGIM
Trigger: CATGATTCCTACCCTGTCCCAGTCATCTCTTTCCTT...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGGTTTCTGTTCCTCGTaGCTCCTATTGCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLGFCSS*LLLLHG
Trigger: GCCATGAAGCAATAGGAGCCACGAGGAACAGAAACC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGTTCTGGCTACCTTGTaGTTCTTGCAGTCTCATCGC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLVLATL*FLQSHR
Trigger: GCGATGAGACTGCAAGAACCACAAGGTAGCCAGAAC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTGCCATGTTGCCACATaGTTCTGGCTACCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLCHVAT*FWLPCG
Trigger: ACCACAAGGTAGCCAGAACCATGTGGCAACATGGCA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCAAGCATTCTAAAGACTaGAGCGCTGGGTCTGAAATT +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSKHSKD*SAGSEI
Trigger: AATTTCAGACCCAGCGCTCCAGTCTTTAGAATGCTT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGGACCACTTTGTTGTTaGTCTTGTACTCAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKGPLCC*SCTQKN
Trigger: GTTCTTCTGAGTACAAGATCAACAACAAAGTGGTCC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTTGGCTTTGATGTACTaGGGCCGCTTCTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLLALMY*GRFWFN
Trigger: ATTGAACCAGAAGCGGCCTCAGTACATCAAAGCCAA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGTGGTATTTCTTCACCTaGTTCTCCTCCAACGTCAAA +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKWYFFT*FSSNVK
Trigger: TTTGACGTTGGAGGAGAATCAGGTGAAGAAATACCA...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGGTTCAGCTCCTTATTaGTTTCATCAATACGCCGCT +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQGSAPY*FHQYAA
Trigger: AGCGGCGTATTGATGAAATCAATAAGGAGCTGAACC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTTCAGGTCTTGTAGCTaGGCCATGGTCTCATCTATG +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLFRSCS*AMVSSM
Trigger: CATAGATGAGACCATGGCTCAGCTACAAGACCTGAA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGCACAGAAGGTCAAATaGCTTGCCCAAGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLAQKVK*LAQGQT
Trigger: TGTTTGACCTTGGGCAAGTCATTTGACCTTCTGTGC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGGCAGGATAAAGATTTaGCTCATCTTTGTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKGRIKI*LIFVFL
Trigger: CAGGAACACAAAGATGAGTCAAATCTTTATCCTGCC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTGCTCCTGTCAGTGTTaGTCACACTGTATGGTTAAT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLCSCQC*SHCMVN
Trigger: ATTAACCATACAGTGTGATCAACACTGACAGGAGCA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTAACGTTCACTTCTTCTaGATAGCTCACATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLNVHFF*IAHILP
Trigger: AGGCAGAATGTGAGCTATTCAGAAGAAGTGAACGTT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCTTGAAAATGGTTCATaGTCCAAAGCAGCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLENGS*SKAALE
Trigger: CTCTAGAGCTGCTTTGGATCATGAACCATTTTCAAG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCATTTCCCGCAGCTTTTaGTTGATCTTGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLISRSF*LILASV
Trigger: GACAGAGGCCAAGATCAAGCAAAAGCTGCGGGAAAT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTTTCAACTTGTCTACTaGTTTCTCATCCCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLFQLVY*FLIPAP
Trigger: CGGCGCTGGGATGAGAAAGCAGTAGACAAGTTGAAA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATGCCTCTTTCCGTTTTaGCTTCATCTGCTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQCLFPF*LHLLFQ
Trigger: CTGAAAGAGCAGATGAAGGCAAAACGGAAAGAGGCA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCAAAATCCAACTGAATaGCCAAGCGAGTCTTCTGAT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLQNPTE*PSESSD
Trigger: ATCAGAAGACTCGCTTGGGCATTCAGTTGGATTTTG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGAATGAGGGCCTCTCGTaGATAGATACTGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKNEGLS*IDTGNS
Trigger: AGAATTTCCAGTATCTATGCACGAGAGGCCCTCATT...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAAGTGTGTTCATCTCTTaGTTGATCTCTTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSVFIS*LISSSA
Trigger: GGCTGAGGAAGAGATCAAGCAAGAGATGAACACACT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATCATTCAGCTTCTGCTaGAGTGTGTTCATCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQSFSFC*SVFISC
Trigger: GCAAGAGATGAACACACTGCAGCAGAAGCTGAATGA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGGAGGGCAAAAATACTaGTACTGCTCATTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLGGQKY*YCSLGL
Trigger: CAACCCCAATGAGCAGTAGCAGTATTTTTGCCCTCC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGTCGTTCAGGAATTTTTaGTCCAGACCTAACATCACC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKSFRNF*SRPNIT
Trigger: GGTGATGTTAGGTCTGGAGCAAAAATTCCTGAACGA...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGATTCAAGCCTTCTGCTaGTTTGTGGATCTCATAGTC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKIQAFC*FVDLIV
Trigger: GACTATGAGATCCACAAAGCAGCAGAAGGCTTGAAT...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTCTATTCAAGCCTTCTaGTGCTTTGTGGATCTCATA +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSSIQAF*CFVDLI
Trigger: TATGAGATCCACAAAGCAGCAGAAGGCTTGAATAGA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATCCTGGTCAGCTTTCTaGTCTCGATTGAATTTCTCC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQSWSAF*SRLNFS
Trigger: GGAGAAATTCAATCGAGACCAGAAAGCTGACCAGGA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAACCTCATCCTCTACCTaGTTCATCTTCTCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLTSSST*FIFSFK
Trigger: CTTGAAGGAGAAGATGAACCAGGTAGAGGATGAGGT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAACTCCAAACGCTTCTTaGCGATTTCATTCTGCCGTT +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQTPNAS*RFHSAV
Trigger: AACGGCAGAATGAAATCGCCAAGAAGCGTTTGGAGT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTGGTCCTCCTTCAGTTaGTTCTTTTCAAAATCCAAC +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSWSSFS*FFSKSN
Trigger: GTTGGATTTTGAAAAGAACCAACTGAAGGAGGACCA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATCACTTCCGACTTCTTaGCCAGATGCTGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQSLPTS*PDADSS
Trigger: TGAAGAATCAGCATCTGGCCAAGAAGTCGGAAGTGA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCTCGTGCATAGATACTaGAAATTCTCTGTGAACCAC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKLVHRY*KFSVNH
Trigger: GTGGTTCACAGAGAATTTCCAGTATCTATGCACGAG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCATCTGAGGTCTCCTaGAACTTGTCTCGGACACTT +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSSEVS*NLSRTL
Trigger: AAGTGTCCGAGACAAGTTCCAGGAGACCTCAGATGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCATCCTAAGCTCTCTTaGAATCAAATTCAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKHPKLS*NQIQPR
Trigger: CCTAGGCTGAATTTGATTCCAAGAGAGCTTAGGATG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGCATTTGCCAAATTATaGCACACAGTACCACCAGTG +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLAFAKL*HTVPPV
Trigger: CACTGGTGGTACTGTGTGCCATAATTTGGCAAATGC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGCATTTGCCAAATTATaGCACACAGTACCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQAFAKL*HTVPPV
Trigger: CACTGGTGGTACTGTGTGCCATAATTTGGCAAATGC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGGGTTCAAACCTTTTTaGGCCTCAGTTTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKGFKPF*ASVSLS
Trigger: AGATAAGGAAACTGAGGCCCAAAAAGGTTTGAACCC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGACTGCCTTCAAGCTATaGTTTCCAAATCTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKTAFKL*FPNLAV
Trigger: TACAGCCAGATTTGGAAACCATAGCTTGAAGGCAGT...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCAGCCTTACTGCACACTaGAGGTGCTTAGCCAAGATT +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSLTAH*RCLAKI
Trigger: AATCTTGGCTAAGCACCTCCAGTGTGCAGTAAGGCT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGATGTGACTCTTACCTaGGAAAGCCCTCAAAAACAT +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKDVTLT*ESPQKH
Trigger: ATGTTTTTGAGGGCTTTCCCAGGTAAGAGTCACATC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCAGGGGGCAGTGTAATTaGCAACCATCTTGTTTGACC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLRGQCN*QPSCLT
Trigger: GGTCAAACAAGATGGTTGCCAATTACACTGCCCCCT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCACATGGTACAGAGCATaGCAACTTATGCTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSTWYRA*QLMLRK
Trigger: TTTCCTTAGCATAAGTTGCCATGCTCTGTACCATGT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGCTCCTATTGCTTCATaGCTTCTAGCCCATTGTTGC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLAPIAS*LLAHCC
Trigger: GCAACAATGGGCTAGAAGCCATGAAGCAATAGGAGC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCAGAGTAGAAAGGAGTTaGAGTGTACCAATGCGAGGC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLRVERS*SVPMRG
Trigger: GCCTCGCATTGGTACACTCCAACTCCTTTCTACTCT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATTGGTTACAGCAATCTaGTACTTCTTTTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLLVTAI*YFFCVG
Trigger: GCCCACACAAAAGAAGTATCAGATTGCTGTAACCAA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATTTTCAAAATCCAACTaGATGCCCAAGCGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQFSKSN*MPKRVF
Trigger: GAAGACTCGCTTGGGCATTCAGTTGGATTTTGAAAA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCATCCATGGTGCCTTTTaGCAGTGGCAACTTAATGTC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLIHGAF*QWQLNV
Trigger: GACATTAAGTTGCCACTGTCAAAAGGCACCATGGAT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCATTCAAAACAAGCATTaGAGCGGTCAAAGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLIQNKH*SGQSAP
Trigger: AGGAGCGCTTTGACCGCTTCAATGCTTGTTTTGAAT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGACACAAATGAGTGAATaGAGGCAGTTTCAGGTAACT +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKTQMSE*RQFQVT
Trigger: AGTTACCTGAAACTGCCTTCATTCACTCATTTGTGT...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGGTAGAGATCATGTCTaGTTCAACTCTGTATTCCAA +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLGRDHV*FNSVFQ
Trigger: TTGGAATACAGAGTTGAATCAGACATGATCTCTACC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCCTCAAGAAAAATACTaGGTAAATAGTACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKPQEKY*VNSTGG
Trigger: CCCTCCTGTACTATTTACTCAGTATTTTTCTTGAGG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCCTCAAGAAAAATACTaGGTAAATAGTACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLPQEKY*VNSTGG
Trigger: CCCTCCTGTACTATTTACTCAGTATTTTTCTTGAGG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGGCAGGATAAAGATTTaGCTCATCTTTGTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLGRIKI*LIFVFL
Trigger: CAGGAACACAAAGATGAGTCAAATCTTTATCCTGCC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAATTGAACTGGATGAATaGATCAATGGCTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQIELDE*INGLWR
Trigger: CCTCCACAAGCCATTGATTCATTCATCCAGTTCAAT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCCTTCCCTTACAAGTCTaGCATTCTGGGTATCTCACT +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLLPLQV*HSGYLT
Trigger: AGTGAGATACCCAGAATGTCAGACTTGTAAGGGAAG...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCCACATTCTGCCTCCCTaGAAGATCTGGTTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLHILPP*KIWLFH
Trigger: ATGAAACAACCAGATCTTTCAGGGAGGCAGAATGTG...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTACTTGAAAATGGTTCATaGTCCAAAGCAGCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLLENGS*SKAALE
Trigger: CTCTAGAGCTGCTTTGGATCATGAACCATTTTCAAG...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGGAAGAACAGAAACTTaGAAATGGTTCATGATCCAA +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSGRTET*KWFMIQ
Trigger: TTGGATCATGAACCATTTTCAAGTTTCTGTTCTTCC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTATAAAGGCCAGCATTTaGCAAATTATGGCACACAGT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLIKASI*QIMAHS
Trigger: ACTGTGTGCCATAATTTGGCAAATGCTGGCCTTTAT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACTGGGTTATTATCCATaGTGGCTGAATCAGATTTCC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQLGYYP*WLNQIS
Trigger: GGAAATCTGATTCAGCCAGCATGGATAATAACCCAG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCATTTCCAGAGGGAAGTaGCCAGTTAAACTTAAGATA +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSISRGK*PVKLKI
Trigger: TATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTGTTTTGCTGTTTCTTaGCTTCATGTCTTCATGCAT +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSCFAVS*LHVFMH
Trigger: ATGCATGAAGACATGAAGGCAAGAAACAGCAAAACA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCCCCAGGAATCTTCATaGTTCAGTATTTGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLPQESS*FSICFA
Trigger: AGCAAAACAAATACTGAAGCATGAAGATTCCTGGGG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAATTCAAGCCTTCTGCTaGTTTGTGGATCTCATAGTC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLIQAFC*FVDLIV
Trigger: GACTATGAGATCCACAAAGCAGCAGAAGGCTTGAAT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGTCTATTCAAGCCTTCTaGTGCTTTGTGGATCTCATA +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKSIQAF*CFVDLI
Trigger: TATGAGATCCACAAAGCAGCAGAAGGCTTGAATAGA...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATCTGAAATTCAAAAGTaGCGCCTCCAGAGAAGAGTA +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSEIQK*RLQRRV
Trigger: TACTCTTCTCTGGAGGCGGCACTTTTGAATTTCAGA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCTTTTTGATATGAGGTaGCTCATAGCGAATCACATC +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKLFDMR*LIANHI
Trigger: GATGTGATTCGCTATGAGCCACCTCATATCAAAAAG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCCTAGATGTCGTGTCTTaGTCTGTTCTAGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLLDVVS*SVLGHS
Trigger: AGAGTGACCTAGAACAGACCAAGACACGACATCTAG...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCACTTCCGACTTCTTaGCCAGATGCTGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSLPTS*PDADSS
Trigger: TGAAGAATCAGCATCTGGCCAAGAAGTCGGAAGTGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACTCGTGCATAGATACTaGAAATTCTCTGTGAACCAC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQLVHRY*KFSVNH
Trigger: GTGGTTCACAGAGAATTTCCAGTATCTATGCACGAG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCAAGGAAAGAGATGACTaGGACAGGGTAGGAATCATG +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLKERDD*DRVGIM
Trigger: CATGATTCCTACCCTGTCCCAGTCATCTCTTTCCTT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGATGTGACTCTTACCTaGGAAAGCCCTCAAAAACAT +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLDVTLT*ESPQKH
Trigger: ATGTTTTTGAGGGCTTTCCCAGGTAAGAGTCACATC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAGACTCAACTCCTTTCTaGCTGTATTTATACTCCTCC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLDSTPF*LYLYSS
Trigger: GGAGGAGTATAAATACAGCCAGAAAGGAGTTGAGTC...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
3UTR CAA 72 bp ACAAGTCTGACATTCTGGGTATCTCACTATAAGTTATaGTATAAGAGATGTGACTCTTACCTGGGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: TSLTFWVSHYKL*YKRCDSYLGKP
Trigger: GGGCTTTCCCAGGTAAGAGTCACATCTCTTATACAATAACTTATAGTGAGATACCCAGAATGTCAGACTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCATCTCCTCCATCTCATaGTTCTTGTCATTCACTTCC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLISSIS*FLSFTS
Trigger: GGAAGTGAATGACAAGAATCATGAGATGGAGGAGAT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTACCTCAAGAAAAATACTaGGTAAATAGTACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLPQEKY*VNSTGG
Trigger: CCCTCCTGTACTATTTACTCAGTATTTTTCTTGAGG...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTATACAAATGTCTCATaGCCTCTGCTTACTTATGGT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLYTNVS*PLLTYG
Trigger: ACCATAAGTAAGCAGAGGTCATGAGACATTTGTATA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGCTTCTACTGTCTCATaGTCTTATCTATTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQASTVS*SYLFKP
Trigger: AGGCTTGAATAGATAAGATCATGAGACAGTAGAAGC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGGAAGAACAGAAACTTaGAAATGGTTCATGATCCAA +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLGRTET*KWFMIQ
Trigger: TTGGATCATGAACCATTTTCAAGTTTCTGTTCTTCC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCCAAAATCCAACTGAATaGCCAAGCGAGTCTTCTGAT +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLQNPTE*PSESSD
Trigger: ATCAGAAGACTCGCTTGGGCATTCAGTTGGATTTTG...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATGTAATTTGCCACCTTaGCAATGTTGGTGTTATCCA +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQCNLPP*QCWCYP
Trigger: TGGATAACACCAACATTGGCAAGGTGGCAAATTACA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAATAAAGGCCAGCATTTaGCAAATTATGGCACACAGT +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQIKASI*QIMAHS
Trigger: ACTGTGTGCCATAATTTGGCAAATGCTGGCCTTTAT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAATAAAGGCCAGCATTTaGCAAATTATGGCACACAGT +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLIKASI*QIMAHS
Trigger: ACTGTGTGCCATAATTTGGCAAATGCTGGCCTTTAT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCCTGGGTTATTATCCATaGTGGCTGAATCAGATTTCC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLLGYYP*WLNQIS
Trigger: GGAAATCTGATTCAGCCAGCATGGATAATAACCCAG...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGCCTTCATGTCTTCATaGATACTGTTTCCAATATCT +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKAFMSS*ILFPIS
Trigger: AGATATTGGAAACAGTATGCATGAAGACATGAAGGC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATGGTCCTCCTTCAGTTaGTTCTTTTCAAAATCCAAC +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLWSSFS*FFSKSN
Trigger: GTTGGATTTTGAAAAGAACCAACTGAAGGAGGACCA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTACTTAAGATACTGTTGTaGAGTACTCTTCAACTCCCT +
Preference number: 4 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLLKILL*STLQLP
Trigger: AGGGAGTTGAAGAGTACTCCACAACAGTATCTTAAG...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCACTGCCTTCAAGCTATaGTTTCCAAATCTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLTAFKL*FPNLAV
Trigger: TACAGCCAGATTTGGAAACCATAGCTTGAAGGCAGT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAAGTTCACATCTGATCTaGAGTCCCCCTATTAAAAAC +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQSSHLI*SPPIKN
Trigger: GTTTTTAATAGGGGGACTCCAGATCAGATGTGAACT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTAATCATGGCTATTCATaGGTACTCATTCTATCCTCT +
Preference number: 4 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLNHGYS*VLILSS
Trigger: AGAGGATAGAATGAGTACCCATGAATAGCCATGATT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCACAAGTCTGACATTCTaGGTATCTCACTATAAGTTA +
Preference number: 4 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSTSLTF*VSHYKL
Trigger: TAACTTATAGTGAGATACCCAGAATGTCAGACTTGT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGCTTCTACTGTCTCATaGTCTTATCTATTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLASTVS*SYLFKP
Trigger: AGGCTTGAATAGATAAGATCATGAGACAGTAGAAGC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR GCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTGTAATTTGCCACCTTaGCAATGTTGGTGTTATCCA +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLCNLPP*QCWCYP
Trigger: TGGATAACACCAACATTGGCAAGGTGGCAAATTACA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGTTGATCACACTGTATaGTTAATGGCTGTTTTACAA +
Preference number: 4 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKVDHTV*LMAVLQ
Trigger: TTGTAAAACAGCCATTAACCATACAGTGTGATCAAC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTTAAAAACCATTTCATaGCTCCCTCACTGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLLKTIS*LPHCLQ
Trigger: TTGAAGGCAGTGAGGGAGCCATGAAATGGTTTTTAA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCAGTTCACATCTGATCTaGAGTCCCCCTATTAAAAAC +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSSHLI*SPPIKN
Trigger: GTTTTTAATAGGGGGACTCCAGATCAGATGTGAACT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAATTCAAAAACTTTACTaGGTGCCTGTTTTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQIQKLY*VPVLCQ
Trigger: CTGACACAAAACAGGCACCCAGTAAAGTTTTTGAAT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR TCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGGAAGAACAGAAACTTaGAAATGGTTCATGATCCAA +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLGRTET*KWFMIQ
Trigger: TTGGATCATGAACCATTTTCAAGTTTCTGTTCTTCC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCATTCAAAAACTTTACTaGGTGCCTGTTTTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLIQKLY*VPVLCQ
Trigger: CTGACACAAAACAGGCACCCAGTAAAGTTTTTGAAT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCAATCATGGCTATTCATaGGTACTCATTCTATCCTCT +
Preference number: 4 (lower is better)
Translates to: FMSSCILFPISGNSFYFLNHGYS*VLILSS
Trigger: AGAGGATAGAATGAGTACCCATGAATAGCCATGATT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CCA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAACAAGTCTGACATTCTaGGTATCTCACTATAAGTTA +
Preference number: 4 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQTSLTF*VSHYKL
Trigger: TAACTTATAGTGAGATACCCAGAATGTCAGACTTGT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS CCA 90 bp TGCGAGGCGAGAGAGGACGCTGGGCTGAAACAGAAGTGCACCGTTTaGGACCGAAGGCCACGGGAGAGCTACCAGCGTCCCCACATTCTC +
Preference number: 5 (lower is better)
Translates to: CEAREDAGLKQKCTV*DRRPRESYQRPHIL
Trigger: GAGAATGTGGGGACGCTGGTAGCTCTCCCGTGGCCTTCGGTCCCAAACGGTGCACTTCTGTTTCAGCCCAGCGTCCTCTCTCGCCTCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675504.1
CDS TCA 90 bp GGGCAAAGGTACGGTCCTCAGCACCCTCCTCAGAGTAGACCATGCTaGCAAAGGCCCGGTTGGCAGCTGGCTTGCCCACAGGAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: GQRYGPQHPPQSRPC*QRPGWQLACPQELH
Trigger: ATGGAGCTCCTGTGGGCAAGCCAGCTGCCAACCGGGCCTTTGTCAGCATGGTCTACTCTGAGGAGGGTGCTGAGGACCGTACCTTTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS GCA 90 bp GGGCCCCAGAGCCTCTGGTGGCCTCAGTTCAGTCTCTTCGTCAACTaGCCTAGGGGATCAGCCTTACCTGTGGATGGCAAAGAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: GPQSLWWPQFSLFVN*PRGSALPVDGKEQG
Trigger: GCCCTGCTCTTTGCCATCCACAGGTAAGGCTGATCCCCTAGGGCAGTTGACGAAGAGACTGAACTGAGGCCACCAGAGGCTCTGGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469129.1
CDS CCA 90 bp ACCCTCCTCAGAGTAGACCATGCTGACAAAGGCCCGGTTGGCAGCTaGCTTGCCCACAGGAGCTCCATGGATCAGGTCCCGCAGGGTCTT +
Preference number: 5 (lower is better)
Translates to: TLLRVDHADKGPVGS*LAHRSSMDQVPQGL
Trigger: AAGACCCTGCGGGACCTGATCCATGGAGCTCCTGTGGGCAAGCCAGCTGCCAACCGGGCCTTTGTCAGCATGGTCTACTCTGAGGAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS TCA 90 bp GATGGCAAAGAGCAGGGCCAGAGCTGCCACTGTCTTCTCCCCGCCTaGCAAGTTGTCCATAGGCCGGAAGCGTTTCCCAGGAGCCACACA +
Preference number: 5 (lower is better)
Translates to: DGKEQGQSCHCLLPA*QVVHRPEAFPRSHT
Trigger: TGTGTGGCTCCTGGGAAACGCTTCCGGCCTATGGACAACTTGTCAGGCGGGGAGAAGACAGTGGCAGCTCTGGCCCTGCTCTTTGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000469129.1
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS GCA 90 bp CATCCAGTGCCACTGTCTTGTGGCGCTGGTGGCCTCCAAAGGCAATaGGGCGGGCATCTTCCACGTTGTCACAGACAAGGGCATTGCCAC +
Preference number: 5 (lower is better)
Translates to: HPVPLSCGAGGLQRQ*GGHLPRCHRQGHCH
Trigger: GTGGCAATGCCCTTGTCTGTGACAACGTGGAAGATGCCCGCCGCATTGCCTTTGGAGGCCACCAGCGCCACAAGACAGTGGCACTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CCA 90 bp CTGACAAAGGCCCGGTTGGCAGCTGGCTTGCCCACAGGAGCTCCATaGATCAGGTCCCGCAGGGTCTTTACCCGCAGGTTGCTGGTTTTT +
Preference number: 5 (lower is better)
Translates to: LTKARLAAGLPTGAP*IRSRRVFTRRLLVF
Trigger: AAAAACCAGCAACCTGCGGGTAAAGACCCTGCGGGACCTGATCCATGGAGCTCCTGTGGGCAAGCCAGCTGCCAACCGGGCCTTTGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS TCA 90 bp AAGGAGTTGGAGTGTACCAATGCGAGGCGAGAGAGGACGCTGGGCTaGAACAGAAGTGCACCGTTTGGGACCGAAGGCCACGGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: KELECTNARRERTLG*NRSAPFGTEGHGRA
Trigger: AGCTCTCCCGTGGCCTTCGGTCCCAAACGGTGCACTTCTGTTTCAGCCCAGCGTCCTCTCTCGCCTCGCATTGGTACACTCCAACTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTCCAGTGCCACTGTCTaGTGGCGCTGGTGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLSSATV*WRWWPP
Trigger: TGGAGGCCACCAGCGCCACAAGACAGTGGCACTGGA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS GCA 90 bp TGCTGGCGGCTGCTCTCCTGGCGGTCGATGCGGGCATCCCCTAGCTaGTCCATCACCTGGTTCAGCTCCTTATTGATTTCATCAATACGC +
Preference number: 5 (lower is better)
Translates to: CWRLLSWRSMRASPS*SITWFSSLLISSIR
Trigger: GCGTATTGATGAAATCAATAAGGAGCTGAACCAGGTGATGGAGCAGCTAGGGGATGCCCGCATCGACCGCCAGGAGAGCAGCCGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CCA 90 bp AGTTCAGTCTCTTCGTCAACTGCCCTAGGGGATCAGCCTTACCTGTaGATGGCAAAGAGCAGGGCCAGAGCTGCCACTGTCTTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: SSVSSSTALGDQPYL*MAKSRARAATVFSP
Trigger: CGGGGAGAAGACAGTGGCAGCTCTGGCCCTGCTCTTTGCCATCCACAGGTAAGGCTGATCCCCTAGGGCAGTTGACGAAGAGACTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469129.1
CDS CCA 90 bp GTAGAAAGGAGTTGGAGTGTACCAATGCGAGGCGAGAGAGGACGCTaGGCTGAAACAGAAGTGCACCGTTTGGGACCGAAGGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: VERSWSVPMRGERGR*AETEVHRLGPKATG
Trigger: TCCCGTGGCCTTCGGTCCCAAACGGTGCACTTCTGTTTCAGCCCAGCGTCCTCTCTCGCCTCGCATTGGTACACTCCAACTCCTTTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675504.1
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTCCCCGCCTGACAAGTaGTCCATAGGCCGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGSPPDK*SIGRKR
Trigger: ACGCTTCCGGCCTATGGACAACTTGTCAGGCGGGGA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCACAGAAGTGCACCGTTaGGGACCGAAGGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGTEVHR*GPKATG
Trigger: TCCCGTGGCCTTCGGTCCCAAACGGTGCACTTCTGT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675504.1
CDS TCA 90 bp GTGAGCAAAAGCCTGGAGGCGGAACTAAATACATGCAGAGGCCGGTaGGGACATGCTGAGCAGATGAGGGTGGATGGGGAAGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: VSKSLEAELNTCRGR*GHAEQMRVDGEDRS
Trigger: GGACCTGTCTTCCCCATCCACCCTCATCTGCTCAGCATGTCCTCACCGGCCTCTGCATGTATTTAGTTCCGCCTCCAGGCTTTTGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469129.1
CDS GCA 90 bp CCGCATCTGCAGTCCATGGGCCTGAGACTGCACCTGACGCAGCTCTaGCTCTTTCCGTTTTGCCTTCATCTGCTCTTTCAGCTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: PHLQSMGLRLHLTQL*LFPFCLHLLFQLLC
Trigger: ACAGAGGAGCTGAAAGAGCAGATGAAGGCAAAACGGAAAGAGGCAGAGCTGCGTCAGGTGCAGTCTCAGGCCCATGGACTGCAGATGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CCA 90 bp CTCTCCTGGCGGTCGATGCGGGCATCCCCTAGCTGCTCCATCACCTaGTTCAGCTCCTTATTGATTTCATCAATACGCCGCTTGGCCATC +
Preference number: 5 (lower is better)
Translates to: LSWRSMRASPSCSIT*FSSLLISSIRRLAI
Trigger: GATGGCCAAGCGGCGTATTGATGAAATCAATAAGGAGCTGAACCAGGTGATGGAGCAGCTAGGGGATGCCCGCATCGACCGCCAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATCCCAGCGCCGTGCCTaGGCCTTCAGGTCACTGGCC +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLSQRRA*AFRSLA
Trigger: GGCCAGTGACCTGAAGGCCAAGGCACGGCGCTGGGA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCAGAGCCTGGCTTATCTaGTCACCCCCTCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGRAWLI*SPPQLQ
Trigger: CTGCAGCTGAGGGGGTGACAAGATAAGCCAGGCTCT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS TCA 90 bp CTAGATGTCGTGTCTTGGTCTGTTCTAGGTCACTCTGGGAGTACTTaGGCCGCATCTGCAGTCCATGGGCCTGAGACTGCACCTGACGCA +
Preference number: 5 (lower is better)
Translates to: LDVVSWSVLGHSGST*AASAVHGPETAPDA
Trigger: TGCGTCAGGTGCAGTCTCAGGCCCATGGACTGCAGATGCGGCTCAAGTACTCCCAGAGTGACCTAGAACAGACCAAGACACGACATCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS GCA 90 bp CAGCTCCTCTGTCAAGCGCTCCTTCTTCTCTTTCAACTTGTCTACTaGTTTCTCATCCCAGCGCCGTGCCTTGGCCTTCAGGTCACTGGC +
Preference number: 5 (lower is better)
Translates to: QLLCQALLLLFQLVY*FLIPAPCLGLQVTG
Trigger: GCCAGTGACCTGAAGGCCAAGGCACGGCGCTGGGATGAGAAAGCAGTAGACAAGTTGAAAGAGAAGAAGGAGCGCTTGACAGAGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CCA 90 bp CGGTCCTGGTCAGCTTTCTGGTCTCGATTGAATTTCTCCAGCTCCTaGGCCAGGGTAGCTGCTCTCTTGCTGGCTTCTTCTTTCAACCGG +
Preference number: 5 (lower is better)
Translates to: RSWSAFWSRLNFSSS*ARVAALLLASSFNR
Trigger: CCGGTTGAAAGAAGAAGCCAGCAAGAGAGCAGCTACCCTGGCCCAGGAGCTGGAGAAATTCAATCGAGACCAGAAAGCTGACCAGGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTCATCAATACGCCGCTaGGCCATCTCCACCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGSSIRR*AISTSS
Trigger: AGAGGAGGTGGAGATGGCCAAGCGGCGTATTGATGA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCGGGCATCTTCCACGTaGTCACAGACAAGGGCATTG +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLRASST*SQTRAL
Trigger: CAATGCCCTTGTCTGTGACAACGTGGAAGATGCCCG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGACGATGGCCTGGAAGTaGCAAGTCGACTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLTMAWK*QVDCSL
Trigger: CAAGGAGCAGTCGACTTGCAACTTCCAGGCCATCGT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTGGCATCTGGGTACTaGGTGAGGTCGAAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGLASGY*VRSKVR
Trigger: CCTGACCTTCGACCTCACCAAGTACCCAGATGCCAA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCACGCTGGGCAGAGCCATaGGGTCCAATGATGGCGGTG +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPRWAEP*GPMMAV
Trigger: CACCGCCATCATTGGACCCAATGGCTCTGCCCAGCG...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375340.10
CDS TCA 90 bp GGTAGTCAAGAGGCAAGAAGGTCTCAGGCTCCCCACGCTGCTCCTTaGTATACTGAATACAGTCCCGGCCTGTCTTCTCCGAGTCCACAA +
Preference number: 5 (lower is better)
Translates to: GSQEARRSQAPHAAP*YTEYSPGLSSPSPQ
Trigger: TTGTGGACTCGGAGAAGACAGGCCGGGACTGTATTCAGTATATCAAGGAGCAGCGTGGGGAGCCTGAGACCTTCTTGCCTCTTGACTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS TCA 90 bp CCTGGAGGCGGAACTAAATACATGCAGAGGCCGGTGAGGACATGCTaGGCAGATGAGGGTGGATGGGGAAGACAGGTCCAGAAAAACCAA +
Preference number: 5 (lower is better)
Translates to: PGGGTKYMQRPVRTC*ADEGGWGRQVQKNQ
Trigger: TTGGTTTTTCTGGACCTGTCTTCCCCATCCACCCTCATCTGCTCAGCATGTCCTCACCGGCCTCTGCATGTATTTAGTTCCGCCTCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469129.1
CDS CCA 90 bp CTGAGGTCTCCTGGAACTTGTCTCGGACACTTTCCAGCTTTTCCATaGCCTTCATGTTGGGGGCGGCAATACGCTGAAGCACACTCTGCT +
Preference number: 5 (lower is better)
Translates to: LRSPGTCLGHFPAFP*PSCWGRQYAEAHSA
Trigger: AGCAGAGTGTGCTTCAGCGTATTGCCGCCCCCAACATGAAGGCCATGGAAAAGCTGGAAAGTGTCCGAGACAAGTTCCAGGAGACCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CCA 90 bp CCAGATTCCACCAAACCATCACCTTCGCAGATCTCTGTGTATCCTTaGGCCCCAGAGCCTCTGGTGGCCTCAGTTCAGTCTCTTCGTCAA +
Preference number: 5 (lower is better)
Translates to: PDSTKPSPSQISVYP*APEPLVASVQSLRQ
Trigger: TTGACGAAGAGACTGAACTGAGGCCACCAGAGGCTCTGGGGCCCAAGGATACACAGAGATCTGCGAAGGTGATGGTTTGGTGGAATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469129.1
CDS CCA 90 bp ACTTGCCTAATGTCAAACTCAAGGCAGAGCCAAGCTCTGAACCCCTaGCTGTCTGACTCTATGCTATACCTGACTCCCTGCGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: TCLMSNSRQSQALNP*LSDSMLYLTPCGRL
Trigger: CAGCCTGCCGCAGGGAGTCAGGTATAGCATAGAGTCAGACAGCCAGGGGTTCAGAGCTTGGCTCTGCCTTGAGTTTGACATTAGGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675065.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTCCCGCAGCTTTTGCTaGATCTTGGCCTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLSRSFC*ILASVS
Trigger: AGAGACAGAGGCCAAGATCAAGCAAAAGCTGCGGGA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGAAATGGGTCATTTCCTaGTTGGCGCCCCCGAGTTTC +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLKWVIS*LAPPSF
Trigger: GAAACTCGGGGGCGCCAACAAGGAAATGACCCATTT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTCGAAGGTCAGGACTTaGCTGATCACACAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLSKVRT*LITQSP
Trigger: AGGGGACTGTGTGATCAGCAAAGTCCTGACCTTCGA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCAGCACCTTCCAGATTaGGAGGCTTCTTCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGQHLPD*EASSVP
Trigger: AGGGACAGAAGAAGCCTCCAAATCTGGAAGGTGCTG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCTACTCGGATCCAGCTaGCTCTTGGAAACACTGTGG +
Preference number: 5 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGLLGSS*LLETLW
Trigger: CCACAGTGTTTCCAAGAGCAAGCTGGATCCGAGTAG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGCTACTCGGATCCAGCTaGCTCTTGGAAACACTGTGG +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLLLGSS*LLETLW
Trigger: CCACAGTGTTTCCAAGAGCAAGCTGGATCCGAGTAG...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGCAAGCATGGCAGGTTaGCTAAGGGTTTCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLASMAG*LRVSRR
Trigger: CCTTCTGGAAACCCTTAGCAAACCTGCCATGCTTGC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCGCTTCTAGCCCATTGTaGCCTTGCTGCTTCATGGCT +
Preference number: 5 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGASSPL*PCCFMA
Trigger: AGCCATGAAGCAGCAAGGCAACAATGGGCTAGAAGC...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS TCA 90 bp AGAGGCAAGAAGGTCTCAGGCTCCCCACGCTGCTCCTTGATATACTaGATACAGTCCCGGCCTGTCTTCTCCGAGTCCACAATAATGGCA +
Preference number: 5 (lower is better)
Translates to: RGKKVSGSPRCSLIY*IQSRPVFSESTIMA
Trigger: TGCCATTATTGTGGACTCGGAGAAGACAGGCCGGGACTGTATTCAGTATATCAAGGAGCAGCGTGGGGAGCCTGAGACCTTCTTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS TCA 90 bp CTTTCCAGCTTTTCCATGGCCTTCATGTTGGGGGCGGCAATACGCTaGAGCACACTCTGCTGCTCATTCAGCTTCTGCTGCAGTGTGTTC +
Preference number: 5 (lower is better)
Translates to: LSSFSMAFMLGAAIR*STLCCSFSFCCSVF
Trigger: GAACACACTGCAGCAGAAGCTGAATGAGCAGCAGAGTGTGCTTCAGCGTATTGCCGCCCCCAACATGAAGGCCATGGAAAAGCTGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CCA 90 bp GCCTCTGTCTCTACTTTCTTCCGTTCTTCCAGATCCAGACGGTCCTaGTCAGCTTTCTGGTCTCGATTGAATTTCTCCAGCTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: ASVSTFFRSSRSRRS*SAFWSRLNFSSSWA
Trigger: GGCCCAGGAGCTGGAGAAATTCAATCGAGACCAGAAAGCTGACCAGGACCGTCTGGATCTGGAAGAACGGAAGAAAGTAGAGACAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CCA 90 bp GGAACTTGTCTCGGACACTTTCCAGCTTTTCCATGGCCTTCATGTTaGGGGCGGCAATACGCTGAAGCACACTCTGCTGCTCATTCAGCT +
Preference number: 5 (lower is better)
Translates to: GTCLGHFPAFPWPSC*GRQYAEAHSAAHSA
Trigger: AGCTGAATGAGCAGCAGAGTGTGCTTCAGCGTATTGCCGCCCCCAACATGAAGGCCATGGAAAAGCTGGAAAGTGTCCGAGACAAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CCA 90 bp TCTGAAATTCAAAAGTGCCGCCTCCAGAGAAGAGTAGAAAGGAGTTaGAGTGTACCAATGCGAGGCGAGAGAGGACGCTGGGCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: SEIQKCRLQRRVERS*SVPMRGERGRWAEP
Trigger: TGGCTCTGCCCAGCGTCCTCTCTCGCCTCGCATTGGTACACTCCAACTCCTTTCTACTCTTCTCTGGAGGCGGCACTTTTGAATTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375340.10
ENST00000674590.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTCCTTCTCGATCTCCTaGTTCTTTGAGGCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLSFSIS*FFEASS
Trigger: GGAACTGGCCTCAAAGAACAAGGAGATCGAGAAGGA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTTAAAGAGCTGCAGCTGTACCTGAGCCCGTACTACCTCATCCTTCAGGCGCTGTCCTTCTCGATCTCCTaGTTCTTTGAGGCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: LKELQLYLSPYYLILQALSFSIS*FFEASS
Trigger: GGAACTGGCCTCAAAGAACAAGGAGATCGAGAAGGA...CAGCGCCTGAAGGATGAGGTAGTACGGGCTCAGGTACAGCTGCAGCTCTTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR CAA 90 bp CAGCCTTCACCATTTCCTTCTTTCGCTTGTCATACTCCTGCGCCAGCTCCCCAGGCTGCTTCCAGCTTCTaGATTTTGTGGGAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: QPSPFPSFACHTPAPAPQAASSF*ILWEVF
Trigger: GAACACCTCCCACAAAATCAAGAAGCTGGAAGCAGC...CTGGGGAGCTGGCGCAGGAGTATGACAAGCGAAAGAAGGAAATGGTGAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCACATCAATCACTAGCTaGGCCCCCTTCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFTSITS*APFSSR
Trigger: CCGGGAGCTGAAGGGGGCCAAGCTAGTGATTGATGT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGCTAGATGTCGTGTCTaGGTCTGTTCTAGGTCACTC +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLARCRV*VCSRSL
Trigger: GAGTGACCTAGAACAGACCAAGACACGACATCTAGC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCCTGCTTGGCCTTCTTaGCTCGCTTTCGGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFPAWPS*LAFGLL
Trigger: AAGCAGCCCGAAAGCGAGCAAAGAAGGCCAAGCAGG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTGTTCGAATGCCTGCTaGGCCTTCTTTGCTCGCTTT +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLCSNAC*AFFARF
Trigger: AAAGCGAGCAAAGAAGGCCAAGCAGGCATTCGAACA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTCAAAGCGCTCCTTCTaGATCTGTTCGAATGCCTGC +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLSKRSF*ICSNAC
Trigger: GCAGGCATTCGAACAGATCAAGAAGGAGCGCTTTGA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATCCCCGCCTGACAAGTaGTCCATAGGCCGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLSPPDK*SIGRKR
Trigger: ACGCTTCCGGCCTATGGACAACTTGTCAGGCGGGGA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCGATCACACAGTCCCCTaGCTCAGGATAGACTCCAAT +
Preference number: 5 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGDHTVP*LRIDSN
Trigger: ATTGGAGTCTATCCTGAGCAAGGGGACTGTGTGATC...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGATGGCTTCTAGCCCATaGTTGCCTTGCTGCTTCATG +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLMASSP*LPCCFM
Trigger: CATGAAGCAGCAAGGCAACAATGGGCTAGAAGCCAT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS TCA 90 bp GGACGCTGGGCAGAGCCATTGGGTCCAATGATGGCGGTGAACCTCTaGAATGGTCCGATAATCTGTCGACCCTTGTACGACTTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: GRWAEPLGPMMAVNL*NGPIICRPLYDLKF
Trigger: GAACTTTAAGTCGTACAAGGGTCGACAGATTATCGGACCATTTCAGAGGTTCACCGCCATCATTGGACCCAATGGCTCTGCCCAGCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375340.10
ENST00000674590.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCGACTTACCAGAGCCATaGGGTCCAATGATGGCGGTG +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFDLPEP*GPMMAV
Trigger: CACCGCCATCATTGGACCCAATGGCTCTGGTAAGTC...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322213.9
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTCCTGCTTTGCTTCCTaGCGTTCAGCCGCAATATTT +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLSCFAS*RSAAIF
Trigger: AAATATTGCGGCTGAACGCAAGGAAGCAAAGCAGGA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGAATTTCCCGCAGCTTTaGCTTGATCTTGGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLNFPQL*LDLGLC
Trigger: ACAGAGGCCAAGATCAAGCAAAAGCTGCGGGAAATT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTCATCAATACGCCGCTaGGCCATCTCCACCTCCTCT +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFSSIRR*AISTSS
Trigger: AGAGGAGGTGGAGATGGCCAAGCGGCGTATTGATGA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCATCAAACTCCCGGATGTaGCGCACACCAATCTCCCGA +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPSNSRM*RTPISR
Trigger: TCGGGAGATTGGTGTGCGCAACATCCGGGAGTTTGA...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGAGGTCTCCTGGAACTaGTCTCGGACACTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPEVSWN*SRTLSS
Trigger: GCTGGAAAGTGTCCGAGACAAGTTCCAGGAGACCTC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTACCTGCTTGGCCTTCTTaGCTCGCTTTCGGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLPAWPS*LAFGLL
Trigger: AAGCAGCCCGAAAGCGAGCAAAGAAGGCCAAGCAGG...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCCTGCTTGGCCTTCTTaGCTCGCTTTCGGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQPAWPS*LAFGLL
Trigger: AAGCAGCCCGAAAGCGAGCAAAGAAGGCCAAGCAGG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGATTCAAAACAAGCATaGAAGCGGTCAAAGCGCTCC +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLDSKQA*KRSKRS
Trigger: GGAGCGCTTTGACCGCTTCAATGCTTGTTTTGAATC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCGATTCAAAACAAGCATaGAAGCGGTCAAAGCGCTCC +
Preference number: 5 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGDSKQA*KRSKRS
Trigger: GGAGCGCTTTGACCGCTTCAATGCTTGTTTTGAATC...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCACGATGGCCTGGAAGTaGCAAGTCGACTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFTMAWK*QVDCSL
Trigger: CAAGGAGCAGTCGACTTGCAACTTCCAGGCCATCGT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTTGGCATCTGGGTACTaGGTGAGGTCGAAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFLASGY*VRSKVR
Trigger: CCTGACCTTCGACCTCACCAAGTACCCAGATGCCAA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCGAATGCCGTACCTGTTaGTGGTATACAGCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGECRTC*WYTASL
Trigger: CAAACTGGCTGTATACCACAAACAGGTACGGCATTC...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCAGAGATTGGTTGCCCTaGAACCAGACACTATCCACA +
Preference number: 5 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGRDWLP*NQTLST
Trigger: TGTGGATAGTGTCTGGTTCAAGGGCAACCAATCTCT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS TCA 90 bp CCACAGCACCCAGAGCCATTGGGTCCAATGATGGCGGTGAACCTCTaGAATGGTCCGATAATCTGTCGACCCTTGTACGACTTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: PQHPEPLGPMMAVNL*NGPIICRPLYDLKF
Trigger: GAACTTTAAGTCGTACAAGGGTCGACAGATTATCGGACCATTTCAGAGGTTCACCGCCATCATTGGACCCAATGGCTCTGGGTGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS GCA 90 bp ACACTCTGCTGCTCATTCAGCTTCTGCTGCAGTGTGTTCATCTCTTaGTTGATCTCTTCCTCAGCCTGGGCATCCTTCAGATCCTCACAC +
Preference number: 5 (lower is better)
Translates to: TLCCSFSFCCSVFIS*LISSSAWASFRSSH
Trigger: GTGTGAGGATCTGAAGGATGCCCAGGCTGAGGAAGAGATCAAGCAAGAGATGAACACACTGCAGCAGAAGCTGAATGAGCAGCAGAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS GCA 90 bp GCATTGAAGCGGTCAAAGCGCTCCTTCTTGATCTGTTCGAATGCCTaGTTGGCCTTCTTTGCTCGCTTTCGGGCTGCTTCAAACTCATCT +
Preference number: 5 (lower is better)
Translates to: ALKRSKRSFLICSNA*LAFFARFRAASNSS
Trigger: AGATGAGTTTGAAGCAGCCCGAAAGCGAGCAAAGAAGGCCAAGCAGGCATTCGAACAGATCAAGAAGGAGCGCTTTGACCGCTTCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS GCA 90 bp ACAAGCATTGAAGCGGTCAAAGCGCTCCTTCTTGATCTGTTCGAATaGCTGCTTGGCCTTCTTTGCTCGCTTTCGGGCTGCTTCAAACTC +
Preference number: 5 (lower is better)
Translates to: TSIEAVKALLLDLFE*LLGLLCSLSGCFKL
Trigger: GAGTTTGAAGCAGCCCGAAAGCGAGCAAAGAAGGCCAAGCAGGCATTCGAACAGATCAAGAAGGAGCGCTTTGACCGCTTCAATGCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CCA 90 bp TCTGAAATTCAAAAGTGCCGCCTCCAGAGAAGAGTAGAAAGGAGTTaGAGTGTACCAATGCGAGGCGAGAGAGGACGCTGGGCTGAAACA +
Preference number: 5 (lower is better)
Translates to: SEIQKCRLQRRVERS*SVPMRGERGRWAET
Trigger: TGTTTCAGCCCAGCGTCCTCTCTCGCCTCGCATTGGTACACTCCAACTCCTTTCTACTCTTCTCTGGAGGCGGCACTTTTGAATTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGAGGAAGTTACGAGCTTaGATGAGAATGCCCAACTTC +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLRKLRA*MRMPNF
Trigger: GAAGTTGGGCATTCTCATCAAAGCTCGTAACTTCCT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTTAAAGAGCTGCAGCTGTACCTGAGCCCGTACTACCTCATCCTTCAGGCGCTGTTTGAGGCCAGTTCCTaGTTGAGCTTCTCAATTTCC +
Preference number: 5 (lower is better)
Translates to: LKELQLYLSPYYLILQALFEASS*LSFSIS
Trigger: GGAAATTGAGAAGCTCAACAAGGAACTGGCCTCAAA...CAGCGCCTGAAGGATGAGGTAGTACGGGCTCAGGTACAGCTGCAGCTCTTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGATGGCATCCATGTTCTaGCCCAAAACCTTGGTTACA +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLMASMF*PKTLVT
Trigger: TGTAACCAAGGTTTTGGGCAAGAACATGGATGCCAT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCGGGCATCTTCCACGTaGTCACAGACAAGGGCATTG +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQRASST*SQTRAL
Trigger: CAATGCCCTTGTCTGTGACAACGTGGAAGATGCCCG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTCCAGTGCCACTGTCTaGTGGCGCTGGTGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSSSATV*WRWWPP
Trigger: TGGAGGCCACCAGCGCCACAAGACAGTGGCACTGGA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTGGGTCATTTCCTTGTaGGCGCCCCCGAGTTTCTTA +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFWVISL*APPSFL
Trigger: TAAGAAACTCGGGGGCGCCAACAAGGAAATGACCCA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAAAATGGGTCATTTCCTaGTTGGCGCCCCCGAGTTTC +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPKWVIS*LAPPSF
Trigger: GAAACTCGGGGGCGCCAACAAGGAAATGACCCATTT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCGCTTCTGTTCAAGCTaGGTCTCAATGGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFRFCSS*VSMAVT
Trigger: GGTGACAGCCATTGAGACCAAGCTTGAACAGAAGCG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGCCACCTTGCCAATGTaGGTGTTATCCAAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPATLPM*VLSKAA
Trigger: TGCTGCCTTGGATAACACCAACATTGGCAAGGTGGC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAACGATGGCCTGGAAGTaGCAAGTCGACTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLTMAWK*QVDCSL
Trigger: CAAGGAGCAGTCGACTTGCAACTTCCAGGCCATCGT...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATACTGCTCATTGGGGTaGGGGTTGGCATCTGGGTAC +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLYCSLG*GLASGY
Trigger: GTACCCAGATGCCAACCCCAACCCCAATGAGCAGTA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGAGGTAGGGGGAAGGTaGGGAGTCAAATATCCAGAG +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPEVGGR*GVKYPE
Trigger: CTCTGGATATTTGACTCCCAACCTTCCCCCTACCTC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCAGTCAGAGTCCTGGCTaGGAAGAGCCTTACTGCACA +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFSQSPG*EEPYCT
Trigger: TGTGCAGTAAGGCTCTTCCAAGCCAGGACTCTGACT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAAGTCAGAGTCCTGGCTaGGAAGAGCCTTACTGCACA +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPSQSPG*EEPYCT
Trigger: TGTGCAGTAAGGCTCTTCCAAGCCAGGACTCTGACT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCGCAAGCATGGCAGGTTaGCTAAGGGTTTCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFASMAG*LRVSRR
Trigger: CCTTCTGGAAACCCTTAGCAAACCTGCCATGCTTGC...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS TCA 90 bp AGTGGCAACTTAATGTCCTGCATCTTACAGGCCTGTAGCAAGTTGTaGCGGTCACTGCGCTTCTGTTCAAGCTTGGTCTCAATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: SGNLMSCILQACSKL*RSLRFCSSLVSMAV
Trigger: GACAGCCATTGAGACCAAGCTTGAACAGAAGCGCAGTGACCGTCACAACTTGCTACAGGCCTGTAAGATGCAGGACATTAAGTTGCCACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS TCA 90 bp TCTGCTGCTCATTCAGCTTCTGCTGCAGTGTGTTCATCTCTTGCTTaGTCTCTTCCTCAGCCTGGGCATCCTTCAGATCCTCACACAGAT +
Preference number: 5 (lower is better)
Translates to: SAAHSASAAVCSSLA*SLPQPGHPSDPHTD
Trigger: ATCTGTGTGAGGATCTGAAGGATGCCCAGGCTGAGGAAGAGATCAAGCAAGAGATGAACACACTGCAGCAGAAGCTGAATGAGCAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CCA 90 bp AGGCCTGTAGCAAGTTGTGACGGTCACTGCGCTTCTGTTCAAGCTTaGTCTCAATGGCTGTCACCTCCTTCTGTAAATGGGTCATTTCCT +
Preference number: 5 (lower is better)
Translates to: RPVASCDGHCASVQA*SQWLSPPSVNGSFP
Trigger: AGGAAATGACCCATTTACAGAAGGAGGTGACAGCCATTGAGACCAAGCTTGAACAGAAGCGCAGTGACCGTCACAACTTGCTACAGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCCTTCTTTCGCTTGTCATACTCCTGCGCCAGCTCCCCAGAACGACTAATCTCAGAGCTGTCCTCTCTTaGGGGTTCTTCATGGCAATA +
Preference number: 5 (lower is better)
Translates to: FLLSLVILLRQLPRTTNLRAVLS*GFFMAI
Trigger: TATTGCCATGAAGAACCCCAAAGAGAGGACAGCTCT...GAGATTAGTCGTTCTGGGGAGCTGGCGCAGGAGTATGACAAGCGAAAGAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR CAA 90 bp CTTGGCTGCTTCCAGCTTCTTGATTTTGTGGGAGGTGTTCTCCTTGGCTTTGATCTTCTTTCTCCTGCTTaGCTTCCTTGCGTTCAGCCG +
Preference number: 5 (lower is better)
Translates to: LGCFQLLDFVGGVLLGFDLLSPA*LPCVQP
Trigger: CGGCTGAACGCAAGGAAGCAAAGCAGGAGAAAGAAG...ATCAAAGCCAAGGAGAACACCTCCCACAAAATCAAGAAGCTGGAAGCAGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR CAA 90 bp GGCCGCTTCTGGTTCAATTCTGAGTCCTTCTCCTTGATCTCCTTCTCAATCTGCTTCTGCAGAGACTTCTaGGCTGCTTCCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: GRFWFNSESFSLISFSICFCRDF*AASSFL
Trigger: CAAGAAGCTGGAAGCAGCCAAGAAGTCTCTGCAGAA...GCAGATTGAGAAGGAGATCAAGGAGAAGGACTCAGAATTGAACCAGAAGCGGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCAGGGTAGCTGCTCTCTaGCTGGCTTCTTCTTTCAAC +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFRVAAL*LASSFN
Trigger: GTTGAAAGAAGAAGCCAGCAAGAGAGCAGCTACCCT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTCCCGCAGCTTTTGCTaGATCTTGGCCTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQSRSFC*ILASVS
Trigger: AGAGACAGAGGCCAAGATCAAGCAAAAGCTGCGGGA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAACATCAATCACTAGCTaGGCCCCCTTCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLTSITS*APFSSR
Trigger: CCGGGAGCTGAAGGGGGCCAAGCTAGTGATTGATGT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCCCAGCGCCGTGCCTaGGCCTTCAGGTCACTGGCC +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSQRRA*AFRSLA
Trigger: GGCCAGTGACCTGAAGGCCAAGGCACGGCGCTGGGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGCTAGATGTCGTGTCTaGGTCTGTTCTAGGTCACTC +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPARCRV*VCSRSL
Trigger: GAGTGACCTAGAACAGACCAAGACACGACATCTAGC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCCATGTGTACTTTATCTaGGTCCTCCTTCAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGHVYFI*VLLQLV
Trigger: AACCAACTGAAGGAGGACCAAGATAAAGTACACATG...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTGGGTCATTTCCTTGTaGGCGCCCCCGAGTTTCTTA +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQWVISL*APPSFL
Trigger: TAAGAAACTCGGGGGCGCCAACAAGGAAATGACCCA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGAAATGGGTCATTTCCTaGTTGGCGCCCCCGAGTTTC +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQKWVIS*LAPPSF
Trigger: GAAACTCGGGGGCGCCAACAAGGAAATGACCCATTT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTGTTCGAATGCCTGCTaGGCCTTCTTTGCTCGCTTT +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFCSNAC*AFFARF
Trigger: AAAGCGAGCAAAGAAGGCCAAGCAGGCATTCGAACA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGATCACACAGTCCCCTaGCTCAGGATAGACTCCAAT +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPDHTVP*LRIDSN
Trigger: ATTGGAGTCTATCCTGAGCAAGGGGACTGTGTGATC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATCGAAGGTCAGGACTTaGCTGATCACACAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLSKVRT*LITQSP
Trigger: AGGGGACTGTGTGATCAGCAAAGTCCTGACCTTCGA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTACTGCTACTGCTCATaGGGGTTGGGGTTGGCATCT +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQYCYCS*GLGLAS
Trigger: AGATGCCAACCCCAACCCCAATGAGCAGTAGCAGTA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGCTTCTAGCCCATTGTaGCCTTGCTGCTTCATGGCT +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQASSPL*PCCFMA
Trigger: AGCCATGAAGCAGCAAGGCAACAATGGGCTAGAAGC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS TCA 90 bp GGGCATCCTTCAGATCCTCACACAGATCACCGTAGTCAATCTCAATaGGGGCCTCTCGTGCATAGATACTGGAAATTCTCTGTGAACCAC +
Preference number: 5 (lower is better)
Translates to: GHPSDPHTDHRSQSQ*GPLVHRYWKFSVNH
Trigger: GTGGTTCACAGAGAATTTCCAGTATCTATGCACGAGAGGCCCTCATTGAGATTGACTACGGTGATCTGTGTGAGGATCTGAAGGATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS TCA 90 bp CCTAATCCCTCCGCAGGGTCTGGTACAGAGCAGCACTCAAGAAATTaGTGCTGTACAATCAAGCAATATAAGCTGCGGGAGTCAGACTCA +
Preference number: 5 (lower is better)
Translates to: PNPSAGSGTEQHSRN*CCTIKQYKLRESDS
Trigger: TGAGTCTGACTCCCGCAGCTTATATTGCTTGATTGTACAGCATCAATTTCTTGAGTGCTGCTCTGTACCAGACCCTGCGGAGGGATTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469129.1
CDS GCA 90 bp TCCTCTTCAGCCTTCACCATTTCCTTCTTTCGCTTGTCATACTCCTaGGCCAGCTCCCCAGAACGACTAATCTCTTCAAATAGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: SSSAFTISFFRLSYS*ASSPERLISSNRAV
Trigger: GACAGCTCTATTTGAAGAGATTAGTCGTTCTGGGGAGCTGGCGCAGGAGTATGACAAGCGAAAGAAGGAAATGGTGAAGGCTGAAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000463684.1
ENST00000675504.1
CDS CCA 90 bp CTGGGCAGAGCCATTGGGTCCAATGATGGCGGTGAACCTCTGAAATaGTCCGATAATCTGTCGACCCTTGTACGACTTAAAGTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: LGRAIGSNDGGEPLK*SDNLSTLVRLKVLN
Trigger: ATTGAGAACTTTAAGTCGTACAAGGGTCGACAGATTATCGGACCATTTCAGAGGTTCACCGCCATCATTGGACCCAATGGCTCTGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375340.10
ENST00000674590.1
CDS CCA 90 bp GCACCCAGAGCCATTGGGTCCAATGATGGCGGTGAACCTCTGAAATaGTCCGATAATCTGTCGACCCTTGTACGACTTAAAGTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: APRAIGSNDGGEPLK*SDNLSTLVRLKVLN
Trigger: ATTGAGAACTTTAAGTCGTACAAGGGTCGACAGATTATCGGACCATTTCAGAGGTTCACCGCCATCATTGGACCCAATGGCTCTGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCATAATCTGTCGACCCTaGTACGACTTAAAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGIICRP*YDLKFS
Trigger: TGAGAACTTTAAGTCGTACAAGGGTCGACAGATTAT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322213.9
ENST00000375340.10
CDS-3UTR CAA 90 bp TTCTCCTTCAGTTCATCCTCCACCTTGTCCATACGCTTCTTGTCCTTCTCGATCATTTCCTTCTTTCGCTaGTCATACTCCTGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: FSFSSSSTLSIRFLSFSIISFFR*SYSCAS
Trigger: GCTGGCGCAGGAGTATGACAAGCGAAAGAAGGAAAT...GATCGAGAAGGACAAGAAGCGTATGGACAAGGTGGAGGATGAACTGAAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGAGGCCAGTTCCTTGTaGAGCTTCTCAATTTCCACT +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPEASSL*SFSIST
Trigger: AGTGGAAATTGAGAAGCTCAACAAGGAACTGGCCTC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CGCTTCTTGTCCTTCTCGATCTCCTTGTTCTTTGAGGCCAGTTCCTTGTTGAGCGAGGCCAGTTCCTTGTaGAGCTTCTCAATTTCCACT +
Preference number: 5 (lower is better)
Translates to: RFLSFSISLFFEASSLLSEASSL*SFSIST
Trigger: AGTGGAAATTGAGAAGCTCAACAAGGAACTGGCCTC...GCTCAACAAGGAACTGGCCTCAAAGAACAAGGAGATCGAGAAGGACAAGAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATCCTTCTCGATCTCCTaGTTCTTTGAGGCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLSFSIS*FFEASS
Trigger: GGAACTGGCCTCAAAGAACAAGGAGATCGAGAAGGA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAGCTGCTTCCAGCTTCTaGATTTTGTGGGAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLAASSF*ILWEVF
Trigger: GAACACCTCCCACAAAATCAAGAAGCTGGAAGCAGC...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGCTGCTTCCAGCTTCTaGATTTTGTGGGAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQAASSF*ILWEVF
Trigger: GAACACCTCCCACAAAATCAAGAAGCTGGAAGCAGC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAGCTTTCTGGTCTCGATaGAATTTCTCCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLAFWSR*NFSSSW
Trigger: CCAGGAGCTGGAGAAATTCAATCGAGACCAGAAAGC...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATCCAGTGCCACTGTCTaGTGGCGCTGGTGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSSATV*WRWWPP
Trigger: TGGAGGCCACCAGCGCCACAAGACAGTGGCACTGGA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATCACTCTGGGAGTACTaGAGCCGCATCTGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLSLWEY*SRICSP
Trigger: TGGACTGCAGATGCGGCTCAAGTACTCCCAGAGTGA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCAACTCCAAACGCTTCTaGGCGATTTCATTCTGCCGT +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFNSKRF*AISFCR
Trigger: ACGGCAGAATGAAATCGCCAAGAAGCGTTTGGAGTT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTGGTCCTCCTTCAGTaGGTTCTTTTCAAAATCCAA +
Preference number: 5 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGLVLLQ*VLFKIQ
Trigger: TTGGATTTTGAAAAGAACCAACTGAAGGAGGACCAA...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGGATCTTCATGTGTCTTaGTTCCTCCTTTTTGAGCTT +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLDLHVS*FLLFEL
Trigger: AAGCTCAAAAAGGAGGAACAAAGACACATGAAGATC...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATGTTCGAATGCCTGCTaGGCCTTCTTTGCTCGCTTT +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLCSNAC*AFFARF
Trigger: AAAGCGAGCAAAGAAGGCCAAGCAGGCATTCGAACA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGAGGCAGGATAAAGATTaGACTCATCTTTGTGTTCCT +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLRQDKD*THLCVP
Trigger: AGGAACACAAAGATGAGTCAAATCTTTATCCTGCCT...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCAGGCAGGATAAAGATTaGACTCATCTTTGTGTTCCT +
Preference number: 5 (lower is better)
Translates to: ALKLSQSAGHSAPSRFGGRQDKD*THLCVP
Trigger: AGGAACACAAAGATGAGTCAAATCTTTATCCTGCCT...GCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTTCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACAGATGGCCCTGTTCAGCTCAGCACCTCCTTTCAGAGGCCAGAATACTCCCTGTTGTTTTGCTGTTTCTaGCCTTCATGTCTTCATGCA +
Preference number: 5 (lower is better)
Translates to: TDGPVQLSTSFQRPEYSLLFCCF*PSCLHA
Trigger: TGCATGAAGACATGAAGGCAAGAAACAGCAAAACAA...CAGGGAGTATTCTGGCCTCTGAAAGGAGGTGCTGAGCTGAACAGGGCCATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTGGTATACAGCCAGTTaGGGAACCACACTGTCCTAC +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQWYTAS*GTTLSY
Trigger: GTAGGACAGTGTGGTTCCCAAACTGGCTGTATACCA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATGGTATACAGCCAGTTaGGGAACCACACTGTCCTAC +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLWYTAS*GTTLSY
Trigger: GTAGGACAGTGTGGTTCCCAAACTGGCTGTATACCA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGAATGCCGTACCTGTTaGTGGTATACAGCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPECRTC*WYTASL
Trigger: CAAACTGGCTGTATACCACAAACAGGTACGGCATTC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATGTTTTCCATGCTGGTaGGCTAGCCAGCCAGAAACA +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLCFPCW*ASQPET
Trigger: TGTTTCTGGCTGGCTAGCCAACCAGCATGGAAAACA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAGCTACCTTGTGGTTCTaGCAGTCTCATCGCTTCTAC +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLATLWF*QSHRFY
Trigger: GTAGAAGCGATGAGACTGCAAGAACCACAAGGTAGC...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCAGCCGCAATATTTTTCTTGCGATGGTAATTAAACTGTGTGTCCTCTTCAGCCAGCACCCAGAGCCATaGGGTCCAATGATGGCGGTG +
Preference number: 5 (lower is better)
Translates to: FSRNIFLAMVIKLCVLFSQHPEP*GPMMAV
Trigger: CACCGCCATCATTGGACCCAATGGCTCTGGGTGCTG...GCTGAAGAGGACACACAGTTTAATTACCATCGCAAGAAAAATATTGCGGCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS TCA 90 bp ATAATGGCATCCATGTTCTTGCCCAAAACCTTGGTTACAGCAATCTaGTACTTCTTTTGTGTGGGCTGGCATAGGTCAATGAGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: IMASMFLPKTLVTAI*YFFCVGWHRSMRRP
Trigger: CGGCCGCCTCATTGACCTATGCCAGCCCACACAAAAGAAGTATCAGATTGCTGTAACCAAGGTTTTGGGCAAGAACATGGATGCCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS TCA 90 bp TGTCACAGACAAGGGCATTGCCACAAGCATACTGCAGGGCCTTTTTaGTATGAGGTGGCTCATAGCGAATCACATCAATCACTAGCTTGG +
Preference number: 5 (lower is better)
Translates to: CHRQGHCHKHTAGPF*YEVAHSESHQSLAW
Trigger: CCAAGCTAGTGATTGATGTGATTCGCTATGAGCCACCTCATATCAAAAAGGCCCTGCAGTATGCTTGTGGCAATGCCCTTGTCTGTGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS GCA 90 bp CTCAAGCATTCTAAAGACTGGAGCGCTGGGTCTGAAATTCAAAAGTaGCGCCTCCAGAGAAGAGTAGAAAGGAGTTGGAGTGTACCAATG +
Preference number: 5 (lower is better)
Translates to: LKHSKDWSAGSEIQK*RLQRRVERSWSVPM
Trigger: CATTGGTACACTCCAACTCCTTTCTACTCTTCTCTGGAGGCGGCACTTTTGAATTTCAGACCCAGCGCTCCAGTCTTTAGAATGCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375340.10
ENST00000674590.1
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGATTCTCCTCCAACGTCAAATCTCTGCCCTGACTCTGACTCTCTTCTTCCATTCCTGCTTTGCTTCCTaGCGTTCAGCCGCAATATTT +
Preference number: 5 (lower is better)
Translates to: LILLQRQISALTLTLFFHSCFAS*RSAAIF
Trigger: AAATATTGCGGCTGAACGCAAGGAAGCAAAGCAGGA...ATGGAAGAAGAGAGTCAGAGTCAGGGCAGAGATTTGACGTTGGAGGAGAATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATCTGAGTCCTTCTCCTaGATCTCCTTCTCAATCTGC +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLSESFS*ISFSIC
Trigger: GCAGATTGAGAAGGAGATCAAGGAGAAGGACTCAGA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCAGCTTTTGCTTGATCTaGGCCTCTGTCTCTACTTTC +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFSFCLI*ASVSTF
Trigger: GAAAGTAGAGACAGAGGCCAAGATCAAGCAAAAGCT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTCTTCTAGGGACTGCTaGCTAGTGGTGATGTATTCC +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQSSRDC*LVVMYS
Trigger: GGAATACATCACCACTAGCAAGCAGTCCCTAGAAGA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTGGTTCAGCTCCTTATaGATTTCATCAATACGCCGC +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFWFSSL*ISSIRR
Trigger: GCGGCGTATTGATGAAATCAATAAGGAGCTGAACCA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGACATCAATCACTAGCTaGGCCCCCTTCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKTSITS*APFSSR
Trigger: CCGGGAGCTGAAGGGGGCCAAGCTAGTGATTGATGT...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGCAGTGTGTTCATCTCTaGCTTGATCTCTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQQCVHL*LDLFLS
Trigger: GCTGAGGAAGAGATCAAGCAAGAGATGAACACACTG...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGCCACCTTGCCAATGTaGGTGTTATCCAAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLATLPM*VLSKAA
Trigger: TGCTGCCTTGGATAACACCAACATTGGCAAGGTGGC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATACTGCTACTGCTCATaGGGGTTGGGGTTGGCATCT +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLYCYCS*GLGLAS
Trigger: AGATGCCAACCCCAACCCCAATGAGCAGTAGCAGTA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATCAAATATCCAGAGATaGGGAGAGGGACAGCTTAGG +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLSNIQR*GEGQLR
Trigger: CCTAAGCTGTCCCTCTCCCAATCTCTGGATATTTGA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCCTCCAGTGAGGAGCTaGACATCATTAAATCCTATG +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFPPVRS*TSLNPM
Trigger: CATAGGATTTAATGATGTCAAGCTCCTCACTGGAGG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCACCTCCAGTGAGGAGCTaGACATCATTAAATCCTATG +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPPPVRS*TSLNPM
Trigger: CATAGGATTTAATGATGTCAAGCTCCTCACTGGAGG...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTGGGTTCAAACCTTTTaGGGCCTCAGTTTCCTTATC +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFWVQTF*GLSFLI
Trigger: GATAAGGAAACTGAGGCCCAAAAAGGTTTGAACCCA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCAAGCACTTGAATGACTaGGAAGACCTGGGTTCAAAC +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFKHLND*EDLGSN
Trigger: GTTTGAACCCAGGTCTTCCAAGTCATTCAAGTGCTT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGACCTGTCCAATACATaGACCTTCAAGGTTCAACCT +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPDLSNT*TFKVQP
Trigger: AGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAATGGTTCTGGCTACCTaGTGGTTCTTGCAGTCTCAT +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLMVLAT*WFLQSH
Trigger: ATGAGACTGCAAGAACCACAAGGTAGCCAGAACCAT...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTAGAGCCTGGCTTATCTaGTCACCCCCTCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLRAWLI*SPPQLQ
Trigger: CTGCAGCTGAGGGGGTGACAAGATAAGCCAGGCTCT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGAAGAGTAGAAAGGAGTaGGAGTGTACCAATGCGAGG +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQKSRKE*ECTNAR
Trigger: CCTCGCATTGGTACACTCCAACTCCTTTCTACTCTT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375340.10
ENST00000675504.1
CDS GCA 90 bp AGCAGCACTCAAGAAATTGATGCTGTACAATCAAGCAATATAAGCTaGGGGAGTCAGACTCAAGTACTACTGGCATTCAGGAGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: SSTQEIDAVQSSNIS*GSQTQVLLAFRRGR
Trigger: CCTTCCCCTCCTGAATGCCAGTAGTACTTGAGTCTGACTCCCGCAGCTTATATTGCTTGATTGTACAGCATCAATTTCTTGAGTGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469129.1
CDS CCA 90 bp AGGAAGGGTGAAGGGGTGAAAGGTGATGATCAAGCTAGATTTACATaGAAAGGGATTATTAGCCAGCAACCTCGTGAGCAAAAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: RKGEGVKGDDQARFT*KGIISQQPREQKPG
Trigger: TCCAGGCTTTTGCTCACGAGGTTGCTGGCTAATAATCCCTTTCCATGTAAATCTAGCTTGATCATCACCTTTCACCCCTTCACCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469129.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTAAGGAAGTTACGAGCTTaGATGAGAATGCCCAACTTC +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLRKLRA*MRMPNF
Trigger: GAAGTTGGGCATTCTCATCAAAGCTCGTAACTTCCT...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAATTTCCTTCTTTCGCTaGTCATACTCCTGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLISFFR*SYSCAS
Trigger: GCTGGCGCAGGAGTATGACAAGCGAAAGAAGGAAAT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCTTCTTTCTCCTGCTTaGCTTCCTTGCGTTCAGCCG +
Preference number: 5 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSLLSPA*LPCVQP
Trigger: CGGCTGAACGCAAGGAAGCAAAGCAGGAGAAAGAAG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTTTGAGGCCAGTTCCTaGTTGAGCTTCTCAATTTCC +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQFEASS*LSFSIS
Trigger: GGAAATTGAGAAGCTCAACAAGGAACTGGCCTCAAA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGCTGCTTCCAGCTTCTaGATTTTGTGGGAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLAASSF*ILWEVF
Trigger: GAACACCTCCCACAAAATCAAGAAGCTGGAAGCAGC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATTCTGCAGAGACTTCTaGGCTGCTTCCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLFCRDF*AASSFL
Trigger: CAAGAAGCTGGAAGCAGCCAAGAAGTCTCTGCAGAA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTCATCAATACGCCGCTaGGCCATCTCCACCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLSSIRR*AISTSS
Trigger: AGAGGAGGTGGAGATGGCCAAGCGGCGTATTGATGA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCGGGCATCTTCCACGTaGTCACAGACAAGGGCATTG +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKRASST*SQTRAL
Trigger: CAATGCCCTTGTCTGTGACAACGTGGAAGATGCCCG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAATGCGAGGCCCAAAGTaGGCTAGCTCACTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQMRGPK*ASSLSS
Trigger: GCTGGAGAGTGAGCTAGCCAACTTTGGGCCTCGCAT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCCATGTGTACTTTATCTaGGTCCTCCTTCAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFHVYFI*VLLQLV
Trigger: AACCAACTGAAGGAGGACCAAGATAAAGTACACATG...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCCCCGCCTGACAAGTaGTCCATAGGCCGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSPPDK*SIGRKR
Trigger: ACGCTTCCGGCCTATGGACAACTTGTCAGGCGGGGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGATCACACAGTCCCCTaGCTCAGGATAGACTCCAAT +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLDHTVP*LRIDSN
Trigger: ATTGGAGTCTATCCTGAGCAAGGGGACTGTGTGATC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGTCATTGGGGTTGGGGTaGGCATCTGGGTACTTGGTG +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKSLGLG*ASGYLV
Trigger: CACCAAGTACCCAGATGCCAACCCCAACCCCAATGA...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAAGAAGGTCAAATGACTaGCCCAAGGTCAAACAACTA +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPRRSND*PKVKQL
Trigger: TAGTTGTTTGACCTTGGGCAAGTCATTTGACCTTCT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCAGCACCTTCCAGATTaGGAGGCTTCTTCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSQHLPD*EASSVP
Trigger: AGGGACAGAAGAAGCCTCCAAATCTGGAAGGTGCTG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATGGGTTCAAACCTTTTaGGGCCTCAGTTTCCTTATC +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLWVQTF*GLSFLI
Trigger: GATAAGGAAACTGAGGCCCAAAAAGGTTTGAACCCA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCCTACTCGGATCCAGCTaGCTCTTGGAAACACTGTGG +
Preference number: 5 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSLLGSS*LLETLW
Trigger: CCACAGTGTTTCCAAGAGCAAGCTGGATCCGAGTAG...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAAGATTTGACTCATCTTaGTGTTCCTGGTGCACAACA +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPRFDSS*CSWCTT
Trigger: TGTTGTGCACCAGGAACACAAAGATGAGTCAAATCT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTCCCCAGGCCCACCCTaGTGGTGCCTAAAGCTTATT +
Preference number: 5 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLSPGPP*WCLKLI
Trigger: AATAAGCTTTAGGCACCACAAGGGTGGGCCTGGGGA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGGACCTGTCCAATACATaGACCTTCAAGGTTCAACCT +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQDLSNT*TFKVQP
Trigger: AGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTC...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS TCA 90 bp TGCTTGCTAGTGGTGATGTATTCCTCCAGTTTCTCAATCCGCTTCTaGTTCTCTTCAATTTCCCGCAGCTTTTGCTTGATCTTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: CLLVVMYSSSFSIRF*FSSISRSFCLILAS
Trigger: AGAGGCCAAGATCAAGCAAAAGCTGCGGGAAATTGAAGAGAATCAGAAGCGGATTGAGAAACTGGAGGAATACATCACCACTAGCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS-3UTR CAA 90 bp TCCTTCAGTTCATCCTCCACCTTGTCCATACGCTTCTTGTCCTTCTCGATCTCCATAATCTGTCGACCCTaGTACGACTTAAAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: SFSSSSTLSIRFLSFSISIICRP*YDLKFS
Trigger: TGAGAACTTTAAGTCGTACAAGGGTCGACAGATTAT...GGAGATCGAGAAGGACAAGAAGCGTATGGACAAGGTGGAGGATGAACTGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCTGGACCACTTTGTTGTaGATCTTGTACTCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFWTTLL*ILYSEE
Trigger: TTCTTCTGAGTACAAGATCAACAACAAAGTGGTCCA...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCAGTTGGACCACTTTGTaGTTGATCTTGTACTCAGAA +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFSWTTL*LILYSE
Trigger: TTCTGAGTACAAGATCAACAACAAAGTGGTCCAACT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCATTTCCTTCTTTCGCTaGTCATACTCCTGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSISFFR*SYSCAS
Trigger: GCTGGCGCAGGAGTATGACAAGCGAAAGAAGGAAAT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCTTCTTTCTCCTGCTTaGCTTCCTTGCGTTCAGCCG +
Preference number: 5 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLLSPA*LPCVQP
Trigger: CGGCTGAACGCAAGGAAGCAAAGCAGGAGAAAGAAG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTTCTGCAGAGACTTCTaGGCTGCTTCCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSFCRDF*AASSFL
Trigger: CAAGAAGCTGGAAGCAGCCAAGAAGTCTCTGCAGAA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATCTTCTAGGGACTGCTaGCTAGTGGTGATGTATTCC +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLSSRDC*LVVMYS
Trigger: GGAATACATCACCACTAGCAAGCAGTCCCTAGAAGA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTCACAGACAAGGGCATaGCCACAAGCATACTGCAGG +
Preference number: 5 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLSQTRA*PQAYCR
Trigger: CCTGCAGTATGCTTGTGGCAATGCCCTTGTCTGTGA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATCACTCTGGGAGTACTaGAGCCGCATCTGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSLWEY*SRICSP
Trigger: TGGACTGCAGATGCGGCTCAAGTACTCCCAGAGTGA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCATGCGAGGCCCAAAGTaGGCTAGCTCACTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLMRGPK*ASSLSS
Trigger: GCTGGAGAGTGAGCTAGCCAACTTTGGGCCTCGCAT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATCAAACTCCCGGATGTaGCGCACACCAATCTCCCGA +
Preference number: 5 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSNSRM*RTPISR
Trigger: TCGGGAGATTGGTGTGCGCAACATCCGGGAGTTTGA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATCAAACTCCCGGATGTaGCGCACACCAATCTCCCGA +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQSNSRM*RTPISR
Trigger: TCGGGAGATTGGTGTGCGCAACATCCGGGAGTTTGA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAGATCTTCATGTGTCTTaGTTCCTCCTTTTTGAGCTT +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPDLHVS*FLLFEL
Trigger: AAGCTCAAAAAGGAGGAACAAAGACACATGAAGATC...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTCGCTTCTGTTCAAGCTaGGTCTCAATGGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLRFCSS*VSMAVT
Trigger: GGTGACAGCCATTGAGACCAAGCTTGAACAGAAGCG...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTCAAAGCGCTCCTTCTaGATCTGTTCGAATGCCTGC +
Preference number: 5 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSSKRSF*ICSNAC
Trigger: GCAGGCATTCGAACAGATCAAGAAGGAGCGCTTTGA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATCATTGGGGTTGGGGTaGGCATCTGGGTACTTGGTG +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQSLGLG*ASGYLV
Trigger: CACCAAGTACCCAGATGCCAACCCCAACCCCAATGA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATACTGCTCATTGGGGTaGGGGTTGGCATCTGGGTAC +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQYCSLG*GLASGY
Trigger: GTACCCAGATGCCAACCCCAACCCCAATGAGCAGTA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATACTGCTCATTGGGGTaGGGGTTGGCATCTGGGTAC +
Preference number: 5 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLYCSLG*GLASGY
Trigger: GTACCCAGATGCCAACCCCAACCCCAATGAGCAGTA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGAGAAGGTCAAATGACTaGCCCAAGGTCAAACAACTA +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQRRSND*PKVKQL
Trigger: TAGTTGTTTGACCTTGGGCAAGTCATTTGACCTTCT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACAGTGGAGAAAGCACTaGAATGACTTGGAAGACCTG +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLQWRKH*NDLEDL
Trigger: CAGGTCTTCCAAGTCATTCAAGTGCTTTCTCCACTG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATCCCCAGGCCCACCCTaGTGGTGCCTAAAGCTTATT +
Preference number: 5 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSPGPP*WCLKLI
Trigger: AATAAGCTTTAGGCACCACAAGGGTGGGCCTGGGGA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCGCTACCTTGTGGTTCTaGCAGTCTCATCGCTTCTAC +
Preference number: 5 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSATLWF*QSHRFY
Trigger: GTAGAAGCGATGAGACTGCAAGAACCACAAGGTAGC...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS TCA 90 bp TGGTTCATCTTCTCCTTCAAGTCTTTCATTTCCCTCTCTCGGCTCTaGATGATCCTCTTGATATCATTAATGCGAGGCCCAAAGTTGGCT +
Preference number: 5 (lower is better)
Translates to: WFIFSFKSFISLSRL*MILLISLMRGPKLA
Trigger: AGCCAACTTTGGGCCTCGCATTAATGATATCAAGAGGATCATTCAGAGCCGAGAGAGGGAAATGAAAGACTTGAAGGAGAAGATGAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGAGTTGGACCACTTTGTaGTTGATCTTGTACTCAGAA +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQSWTTL*LILYSE
Trigger: TTCTGAGTACAAGATCAACAACAAAGTGGTCCAACT...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTATTTCCTTCTTTCGCTaGTCATACTCCTGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLISFFR*SYSCAS
Trigger: GCTGGCGCAGGAGTATGACAAGCGAAAGAAGGAAAT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACTTCTTTCTCCTGCTTaGCTTCCTTGCGTTCAGCCG +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQLLSPA*LPCVQP
Trigger: CGGCTGAACGCAAGGAAGCAAAGCAGGAGAAAGAAG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTAGGGTAGCTGCTCTCTaGCTGGCTTCTTCTTTCAAC +
Preference number: 5 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLRVAAL*LASSFN
Trigger: GTTGAAAGAAGAAGCCAGCAAGAGAGCAGCTACCCT...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTTTCAGAGGCCAGAATACTCCCTGTCGTTCAGGAATTTTTGCTCCAGACCTATTCTTCTCTTTCAACTaGTCTACTGCTTTCTCATCC +
Preference number: 5 (lower is better)
Translates to: PFRGQNTPCRSGIFAPDLFFSFN*STAFSS
Trigger: GGATGAGAAAGCAGTAGACAAGTTGAAAGAGAAGAA...TAGGTCTGGAGCAAAAATTCCTGAACGACAGGGAGTATTCTGGCCTCTGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCACTCTGGGAGTACTaGAGCCGCATCTGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSLWEY*SRICSP
Trigger: TGGACTGCAGATGCGGCTCAAGTACTCCCAGAGTGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTGCTAGATGTCGTGTCTaGGTCTGTTCTAGGTCACTC +
Preference number: 5 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLARCRV*VCSRSL
Trigger: GAGTGACCTAGAACAGACCAAGACACGACATCTAGC...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATGGGTCATTTCCTTGTaGGCGCCCCCGAGTTTCTTA +
Preference number: 5 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLWVISL*APPSFL
Trigger: TAAGAAACTCGGGGGCGCCAACAAGGAAATGACCCA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACGCTTCTGTTCAAGCTaGGTCTCAATGGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQRFCSS*VSMAVT
Trigger: GGTGACAGCCATTGAGACCAAGCTTGAACAGAAGCG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATCGAAGGTCAGGACTTaGCTGATCACACAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSKVRT*LITQSP
Trigger: AGGGGACTGTGTGATCAGCAAAGTCCTGACCTTCGA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTCAAATATCCAGAGATaGGGAGAGGGACAGCTTAGG +
Preference number: 5 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSSNIQR*GEGQLR
Trigger: CCTAAGCTGTCCCTCTCCCAATCTCTGGATATTTGA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGAGGTAGGGGGAAGGTaGGGAGTCAAATATCCAGAG +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQEVGGR*GVKYPE
Trigger: CTCTGGATATTTGACTCCCAACCTTCCCCCTACCTC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACCTCCAGTGAGGAGCTaGACATCATTAAATCCTATG +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLPPVRS*TSLNPM
Trigger: CATAGGATTTAATGATGTCAAGCTCCTCACTGGAGG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCATGGTACGTGACTTCTTaGGTTGAAAACAGACAAATT +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPWYVTS*VENRQI
Trigger: AATTTGTCTGTTTTCAACCAAAGAAGTCACGTACCA...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCTACAGCAAGGCTACTGCGTCCACAGTATAAGGGAGTCAAACTAGTTCCTCCAAAACTTAAGATACTGTaGTGGAGTACTCTTCAACTC +
Preference number: 5 (lower is better)
Translates to: PTARLLRPQYKGVKLVPPKLKIL*WSTLQL
Trigger: GAGTTGAAGAGTACTCCACAACAGTATCTTAAGTTT...TGGAGGAACTAGTTTGACTCCCTTATACTGTGGACGCAGTAGCCTTGCTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp AAACTTTCCCAGTCAGCAGGGCATTCAGCACCTTCCAGATTTGGAGGCTTCTTCAAACTTAAGATACTGTaGTGGAGTACTCTTCAACTC +
Preference number: 5 (lower is better)
Translates to: KLSQSAGHSAPSRFGGFFKLKIL*WSTLQL
Trigger: GAGTTGAAGAGTACTCCACAACAGTATCTTAAGTTT...GAAGAAGCCTCCAAATCTGGAAGGTGCTGAATGCCCTGCTGACTGGGAAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CTGGGACAGGGTAGGAATCATGGCTATTCATGGGTACTCATTCTATCCTCTCAGTTGTTTTGCTGTTTCTaGCCTTCATGTCTTCATGCA +
Preference number: 5 (lower is better)
Translates to: LGQGRNHGYSWVLILSSQLFCCF*PSCLHA
Trigger: TGCATGAAGACATGAAGGCAAGAAACAGCAAAACAA...CTGAGAGGATAGAATGAGTACCCATGAATAGCCATGATTCCTACCCTGTCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGTGTTTTCCATGCTGGTaGGCTAGCCAGCCAGAAACA +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKCFPCW*ASQPET
Trigger: TGTTTCTGGCTGGCTAGCCAACCAGCATGGAAAACA...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCCCCAGGCCCACCCTaGTGGTGCCTAAAGCTTATT +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSPGPP*WCLKLI
Trigger: AATAAGCTTTAGGCACCACAAGGGTGGGCCTGGGGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAAGTCAGAGTCCTGGCTaGGAAGAGCCTTACTGCACA +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQSQSPG*EEPYCT
Trigger: TGTGCAGTAAGGCTCTTCCAAGCCAGGACTCTGACT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAGACCTGTCCAATACATaGACCTTCAAGGTTCAACCT +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLDLSNT*TFKVQP
Trigger: AGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTC...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGCTTCTAGCCCATTGTaGCCTTGCTGCTTCATGGCT +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQASSPL*PCCFMA
Trigger: AGCCATGAAGCAGCAAGGCAACAATGGGCTAGAAGC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACTAGTGCTTCCCAAATaGGTGACTCAACTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLVLPK*VTQLLS
Trigger: AGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGAGAGCTGTCCTCTCTTaGGGGTTCTTCATGGCAATA +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKRAVLS*GFFMAI
Trigger: TATTGCCATGAAGAACCCCAAAGAGAGGACAGCTCT...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGAGGCCAGTTCCTTGTaGAGCTTCTCAATTTCCACT +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKEASSL*SFSIST
Trigger: AGTGGAAATTGAGAAGCTCAACAAGGAACTGGCCTC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCTTTGAGGCCAGTTCCTaGTTGAGCTTCTCAATTTCC +
Preference number: 5 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSFEASS*LSFSIS
Trigger: GGAAATTGAGAAGCTCAACAAGGAACTGGCCTCAAA...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CGCAATATTTTTCTTGCGATGGTAATTAAACTGTGTGTCCTCTTCAGCCTTCACTCTGAGTCCTTCTCCTaGATCTCCTTCTCAATCTGC +
Preference number: 5 (lower is better)
Translates to: RNIFLAMVIKLCVLFSLHSESFS*ISFSIC
Trigger: GCAGATTGAGAAGGAGATCAAGGAGAAGGACTCAGA...GTGAAGGCTGAAGAGGACACACAGTTTAATTACCATCGCAAGAAAAATATTGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463684.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGCTTTCTGGTCTCGATaGAATTTCTCCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQAFWSR*NFSSSW
Trigger: CCAGGAGCTGGAGAAATTCAATCGAGACCAGAAAGC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCAGCTTTTGCTTGATCTaGGCCTCTGTCTCTACTTTC +
Preference number: 5 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSSFCLI*ASVSTF
Trigger: GAAAGTAGAGACAGAGGCCAAGATCAAGCAAAAGCT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCACAGACAAGGGCATaGCCACAAGCATACTGCAGG +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSQTRA*PQAYCR
Trigger: CCTGCAGTATGCTTGTGGCAATGCCCTTGTCTGTGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCAGTGTGTTCATCTCTaGCTTGATCTCTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKQCVHL*LDLFLS
Trigger: GCTGAGGAAGAGATCAAGCAAGAGATGAACACACTG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATCAAAGCGCTCCTTCTaGATCTGTTCGAATGCCTGC +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQSKRSF*ICSNAC
Trigger: GCAGGCATTCGAACAGATCAAGAAGGAGCGCTTTGA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGATTCAAAACAAGCATaGAAGCGGTCAAAGCGCTCC +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKDSKQA*KRSKRS
Trigger: GGAGCGCTTTGACCGCTTCAATGCTTGTTTTGAATC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGCCACCTTGCCAATGTaGGTGTTATCCAAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLATLPM*VLSKAA
Trigger: TGCTGCCTTGGATAACACCAACATTGGCAAGGTGGC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTACTGCTACTGCTCATaGGGGTTGGGGTTGGCATCT +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLYCYCS*GLGLAS
Trigger: AGATGCCAACCCCAACCCCAATGAGCAGTAGCAGTA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTAAGATTTGACTCATCTTaGTGTTCCTGGTGCACAACA +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLRFDSS*CSWCTT
Trigger: TGTTGTGCACCAGGAACACAAAGATGAGTCAAATCT...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGAATGCCGTACCTGTTaGTGGTATACAGCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKECRTC*WYTASL
Trigger: CAAACTGGCTGTATACCACAAACAGGTACGGCATTC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGCAAGCATGGCAGGTTaGCTAAGGGTTTCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLASMAG*LRVSRR
Trigger: CCTTCTGGAAACCCTTAGCAAACCTGCCATGCTTGC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAATGGCTTCTAGCCCATaGTTGCCTTGCTGCTTCATG +
Preference number: 5 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLMASSP*LPCCFM
Trigger: CATGAAGCAGCAAGGCAACAATGGGCTAGAAGCCAT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAATGGCTTCTAGCCCATaGTTGCCTTGCTGCTTCATG +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQMASSP*LPCCFM
Trigger: CATGAAGCAGCAAGGCAACAATGGGCTAGAAGCCAT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAGCTACCTTGTGGTTCTaGCAGTCTCATCGCTTCTAC +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQATLWF*QSHRFY
Trigger: GTAGAAGCGATGAGACTGCAAGAACCACAAGGTAGC...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATGGACCACTTTGTTGTaGATCTTGTACTCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLWTTLL*ILYSEE
Trigger: TTCTTCTGAGTACAAGATCAACAACAAAGTGGTCCA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAAGAGCTGTCCTCTCTTaGGGGTTCTTCATGGCAATA +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQRAVLS*GFFMAI
Trigger: TATTGCCATGAAGAACCCCAAAGAGAGGACAGCTCT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATCCTGCTTTGCTTCCTaGCGTTCAGCCGCAATATTT +
Preference number: 5 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSCFAS*RSAAIF
Trigger: AAATATTGCGGCTGAACGCAAGGAAGCAAAGCAGGA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCCTTCTCGATCTCCTaGTTCTTTGAGGCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSFSIS*FFEASS
Trigger: GGAACTGGCCTCAAAGAACAAGGAGATCGAGAAGGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATCTGAGTCCTTCTCCTaGATCTCCTTCTCAATCTGC +
Preference number: 5 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSESFS*ISFSIC
Trigger: GCAGATTGAGAAGGAGATCAAGGAGAAGGACTCAGA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCAGGGTAGCTGCTCTCTaGCTGGCTTCTTCTTTCAAC +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLRVAAL*LASSFN
Trigger: GTTGAAAGAAGAAGCCAGCAAGAGAGCAGCTACCCT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGAGCTTTTGCTTGATCTaGGCCTCTGTCTCTACTTTC +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKSFCLI*ASVSTF
Trigger: GAAAGTAGAGACAGAGGCCAAGATCAAGCAAAAGCT...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAAATTTCCCGCAGCTTTaGCTTGATCTTGGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLNFPQL*LDLGLC
Trigger: ACAGAGGCCAAGATCAAGCAAAAGCTGCGGGAAATT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAAATTTCCCGCAGCTTTaGCTTGATCTTGGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQNFPQL*LDLGLC
Trigger: ACAGAGGCCAAGATCAAGCAAAAGCTGCGGGAAATT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATCTTCTAGGGACTGCTaGCTAGTGGTGATGTATTCC +
Preference number: 5 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSSRDC*LVVMYS
Trigger: GGAATACATCACCACTAGCAAGCAGTCCCTAGAAGA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGATGGCATCCATGTTCTaGCCCAAAACCTTGGTTACA +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKMASMF*PKTLVT
Trigger: TGTAACCAAGGTTTTGGGCAAGAACATGGATGCCAT...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAAACTCCAAACGCTTCTaGGCGATTTCATTCTGCCGT +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQNSKRF*AISFCR
Trigger: ACGGCAGAATGAAATCGCCAAGAAGCGTTTGGAGTT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTATTGGTCCTCCTTCAGTaGGTTCTTTTCAAAATCCAA +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLLVLLQ*VLFKIQ
Trigger: TTGGATTTTGAAAAGAACCAACTGAAGGAGGACCAA...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACAGTGTGTTCATCTCTaGCTTGATCTCTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQQCVHL*LDLFLS
Trigger: GCTGAGGAAGAGATCAAGCAAGAGATGAACACACTG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCAGAAGGTCAAATGACTaGCCCAAGGTCAAACAACTA +
Preference number: 5 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSRRSND*PKVKQL
Trigger: TAGTTGTTTGACCTTGGGCAAGTCATTTGACCTTCT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTACAGTGGAGAAAGCACTaGAATGACTTGGAAGACCTG +
Preference number: 5 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLQWRKH*NDLEDL
Trigger: CAGGTCTTCCAAGTCATTCAAGTGCTTTCTCCACTG...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ACCATCTTGTTTGACCTGTCCAATACATTGACCTTCAAGGTTCAACCTAAGTCCAGATTTGACTCATCTTaGTGTTCCTGGTGCACAACA +
Preference number: 5 (lower is better)
Translates to: TILFDLSNTLTFKVQPKSRFDSS*CSWCTT
Trigger: TGTTGTGCACCAGGAACACAAAGATGAGTCAAATCT...GGACTTAGGTTGAACCTTGAAGGTCAATGTATTGGACAGGTCAAACAAGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTGGTATACAGCCAGTTaGGGAACCACACTGTCCTAC +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLWYTAS*GTTLSY
Trigger: GTAGGACAGTGTGGTTCCCAAACTGGCTGTATACCA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAAGAGATTGGTTGCCCTaGAACCAGACACTATCCACA +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQRDWLP*NQTLST
Trigger: TGTGGATAGTGTCTGGTTCAAGGGCAACCAATCTCT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTAATGGTTCTGGCTACCTaGTGGTTCTTGCAGTCTCAT +
Preference number: 5 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLMVLAT*WFLQSH
Trigger: ATGAGACTGCAAGAACCACAAGGTAGCCAGAACCAT...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCTAGTGCTTCCCAAATaGGTGACTCAACTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKLVLPK*VTQLLS
Trigger: AGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS CCA 90 bp ATGAGAATGCCCAACTTCTCTAATTCCTCACTGTACTCATGTAGTTaGACCACTTTGTTGTTGATCTTGTACTCAGAAGAACCTCCTACA +
Preference number: 5 (lower is better)
Translates to: MRMPNFSNSSLYSCS*TTLLLILYSEEPPT
Trigger: TGTAGGAGGTTCTTCTGAGTACAAGATCAACAACAAAGTGGTCCAACTACATGAGTACAGTGAGGAATTAGAGAAGTTGGGCATTCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATTTGAGGCCAGTTCCTaGTTGAGCTTCTCAATTTCC +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQFEASS*LSFSIS
Trigger: GGAAATTGAGAAGCTCAACAAGGAACTGGCCTCAAA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCTGAGTCCTTCTCCTaGATCTCCTTCTCAATCTGC +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSESFS*ISFSIC
Trigger: GCAGATTGAGAAGGAGATCAAGGAGAAGGACTCAGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATGGTTCAGCTCCTTATaGATTTCATCAATACGCCGC +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQWFSSL*ISSIRR
Trigger: GCGGCGTATTGATGAAATCAATAAGGAGCTGAACCA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGCATGTGTACTTTATCTaGGTCCTCCTTCAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKHVYFI*VLLQLV
Trigger: AACCAACTGAAGGAGGACCAAGATAAAGTACACATG...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCAAATATCCAGAGATaGGGAGAGGGACAGCTTAGG +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSNIQR*GEGQLR
Trigger: CCTAAGCTGTCCCTCTCCCAATCTCTGGATATTTGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp CCCTTCTCTAGTGCTTCCCAAATTGGTGACTCAACTCCTTTCTGGCTGTATTTACCAAATCCTACCAATTaGTCAAGGTCTAGCTTAAAT +
Preference number: 5 (lower is better)
Translates to: PFSSASQIGDSTPFWLYLPNPTN*SRSSLN
Trigger: ATTTAAGCTAGACCTTGACAAATTGGTAGGATTTGG...TAAATACAGCCAGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAGAGAAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCAGAGATTGGTTGCCCTaGAACCAGACACTATCCACA +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLRDWLP*NQTLST
Trigger: TGTGGATAGTGTCTGGTTCAAGGGCAACCAATCTCT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTCATACATTTGCCATTaGATACATGCCACCCCTGTA +
Preference number: 5 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLSYICH*IHATPV
Trigger: TACAGGGGTGGCATGTATCAAATGGCAAATGTATGA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAACTAGTGCTTCCCAAATaGGTGACTCAACTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQLVLPK*VTQLLS
Trigger: AGAAAGGAGTTGAGTCACCAATTTGGGAAGCACTAG...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGATAATCTGTCGACCCTaGTACGACTTAAAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKIICRP*YDLKFS
Trigger: TGAGAACTTTAAGTCGTACAAGGGTCGACAGATTAT...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322213.9
ENST00000375340.10
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGACTTTGTTGTTGATCTaGTACTCAGAAGAACCTCCT +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKTLLLI*YSEEPP
Trigger: AGGAGGTTCTTCTGAGTACAAGATCAACAACAAAGT...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCATGGCATCCATGTTCTaGCCCAAAACCTTGGTTACA +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLMASMF*PKTLVT
Trigger: TGTAACCAAGGTTTTGGGCAAGAACATGGATGCCAT...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGTTCTTCTCTTTCAACTaGTCTACTGCTTTCTCATCC +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKFFSFN*STAFSS
Trigger: GGATGAGAAAGCAGTAGACAAGTTGAAAGAGAAGAA...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATTTCCAGAGGGAAGTGCCCAGTTAAACTTAAGATACTGTTGTGGAGTACTCTTTTGGTCCTCCTTCAGTaGGTTCTTTTCAAAATCCAA +
Preference number: 5 (lower is better)
Translates to: ISRGKCPVKLKILLWSTLLVLLQ*VLFKIQ
Trigger: TTGGATTTTGAAAAGAACCAACTGAAGGAGGACCAA...AAGAGTACTCCACAACAGTATCTTAAGTTTAACTGGGCACTTCCCTCTGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGATCTTCATGTGTCTTaGTTCCTCCTTTTTGAGCTT +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKDLHVS*FLLFEL
Trigger: AAGCTCAAAAAGGAGGAACAAAGACACATGAAGATC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TATCTCCTTACTAGGAGGGTAGAGATCATGTCTGATTCAACTCTGTATTCCAAGGCTTCAGTATTTGTTTaGCTGTTTCTTGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: YLLTRRVEIMSDSTLYSKASVFV*LFLAFM
Trigger: CATGAAGGCAAGAAACAGCAAAACAAATACTGAAGC...CTTGGAATACAGAGTTGAATCAGACATGATCTCTACCCTCCTAGTAAGGAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp ATGACCTCTGCTTACTTATGGTTTCTGCAGCTTTCTCTTTGCTTTTGCTGTTTATCATACATTTGCCATTaGATACATGCCACCCCTGTA +
Preference number: 5 (lower is better)
Translates to: MTSAYLWFLQLSLCFCCLSYICH*IHATPV
Trigger: TACAGGGGTGGCATGTATCAAATGGCAAATGTATGA...TAAACAGCAAAAGCAAAGAGAAAGCTGCAGAAACCATAAGTAAGCAGAGGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAATTCTTCTCTTTCAACTaGTCTACTGCTTTCTCATCC +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQFFSFN*STAFSS
Trigger: GGATGAGAAAGCAGTAGACAAGTTGAAAGAGAAGAA...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTCATACATTTGCCATTaGATACATGCCACCCCTGTA +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLSYICH*IHATPV
Trigger: TACAGGGGTGGCATGTATCAAATGGCAAATGTATGA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCTGGACCACTTTGTTGTaGATCTTGTACTCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLWTTLL*ILYSEE
Trigger: TTCTTCTGAGTACAAGATCAACAACAAAGTGGTCCA...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTGTGGTTCTTGCAGTCTCATCGCTTCTACTGTCTCATGATCTTATCTATTCAAAAACTTAAGATACTGTaGTGGAGTACTCTTCAACTC +
Preference number: 5 (lower is better)
Translates to: LWFLQSHRFYCLMILSIQKLKIL*WSTLQL
Trigger: GAGTTGAAGAGTACTCCACAACAGTATCTTAAGTTT...TTGAATAGATAAGATCATGAGACAGTAGAAGCGATGAGACTGCAAGAACCACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS-3UTR CAA 90 bp TTCATGTCTTCATGCATACTGTTTCCAATATCTGGAAATTCCTTCTACTTCCTCGCTTCAGTATTTGTTTaGCTGTTTCTTGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: FMSSCILFPISGNSFYFLASVFV*LFLAFM
Trigger: CATGAAGGCAAGAAACAGCAAAACAAATACTGAAGC...GAGGAAGTAGAAGGAATTTCCAGATATTGGAAACAGTATGCATGAAGACATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS CCA 72 bp GCCCGGTTGGCAGCTGGCTTGCCCACAGGAGCTCCATaGATCAGGTCCCGCAGGGTCTTTACCCGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: ARLAAGLPTGAP*IRSRRVFTRRL
Trigger: CAACCTGCGGGTAAAGACCCTGCGGGACCTGATCCATGGAGCTCCTGTGGGCAAGCCAGCTGCCAACCGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS TCA 72 bp GAGCAGGGCCAGAGCTGCCACTGTCTTCTCCCCGCCTaGCAAGTTGTCCATAGGCCGGAAGCGTTTCCCAGG +
Preference number: 6 (lower is better)
Translates to: EQGQSCHCLLPA*QVVHRPEAFPR
Trigger: CCTGGGAAACGCTTCCGGCCTATGGACAACTTGTCAGGCGGGGAGAAGACAGTGGCAGCTCTGGCCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000469129.1
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CCA 72 bp ATTATCTCTGCCTTTCGCTGCTGGCGGCTGCTCTCCTaGCGGTCGATGCGGGCATCCCCTAGCTGCTCCATC +
Preference number: 6 (lower is better)
Translates to: IISAFRCWRLLS*RSMRASPSCSI
Trigger: GATGGAGCAGCTAGGGGATGCCCGCATCGACCGCCAGGAGAGCAGCCGCCAGCAGCGAAAGGCAGAGATAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CCA 72 bp AGAGAGGACGCTGGGCTGAAACAGAAGTGCACCGTTTaGGACCGAAGGCCACGGGAGAGCTACCAGCGTCCC +
Preference number: 6 (lower is better)
Translates to: REDAGLKQKCTV*DRRPRESYQRP
Trigger: GGGACGCTGGTAGCTCTCCCGTGGCCTTCGGTCCCAAACGGTGCACTTCTGTTTCAGCCCAGCGTCCTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675504.1
CDS CAA 72 bp GAGAGAGGACGCTGGGCTGAAACAGAAGTGCACCGTTaGGGACCGAAGGCCACGGGAGAGCTACCAGCGTCC +
Preference number: 6 (lower is better)
Translates to: ERGRWAETEVHR*GPKATGELPAS
Trigger: GGACGCTGGTAGCTCTCCCGTGGCCTTCGGTCCCAAACGGTGCACTTCTGTTTCAGCCCAGCGTCCTCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675504.1
CDS CAA 90 bp ATGCGAGGCGAGAGAGGACGCTGGGCTGAAACAGAAGTGCACCGTTaGGGACCGAAGGCCACGGGAGAGCTACCAGCGTCCCCACATTCT +
Preference number: 6 (lower is better)
Translates to: MRGERGRWAETEVHR*GPKATGELPASPHS
Trigger: AGAATGTGGGGACGCTGGTAGCTCTCCCGTGGCCTTCGGTCCCAAACGGTGCACTTCTGTTTCAGCCCAGCGTCCTCTCTCGCCTCGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675504.1
CDS TCA 72 bp TACGGTCCTCAGCACCCTCCTCAGAGTAGACCATGCTaGCAAAGGCCCGGTTGGCAGCTGGCTTGCCCACAG +
Preference number: 6 (lower is better)
Translates to: YGPQHPPQSRPC*QRPGWQLACPQ
Trigger: CTGTGGGCAAGCCAGCTGCCAACCGGGCCTTTGTCAGCATGGTCTACTCTGAGGAGGGTGCTGAGGACCGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS GCA 72 bp TGCTTTCCATTATCTCTGCCTTTCGCTGCTGGCGGCTaGTCTCCTGGCGGTCGATGCGGGCATCCCCTAGCT +
Preference number: 6 (lower is better)
Translates to: CFPLSLPFAAGG*SPGGRCGHPLA
Trigger: AGCTAGGGGATGCCCGCATCGACCGCCAGGAGAGCAGCCGCCAGCAGCGAAAGGCAGAGATAATGGAAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS GCA 72 bp AGGCGCTTGATGCTTTCCATTATCTCTGCCTTTCGCTaGTGGCGGCTGCTCTCCTGGCGGTCGATGCGGGCA +
Preference number: 6 (lower is better)
Translates to: RRLMLSIISAFR*WRLLSWRSMRA
Trigger: TGCCCGCATCGACCGCCAGGAGAGCAGCCGCCAGCAGCGAAAGGCAGAGATAATGGAAAGCATCAAGCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS GCA 72 bp CCACTGTCTTGTGGCGCTGGTGGCCTCCAAAGGCAATaGGGCGGGCATCTTCCACGTTGTCACAGACAAGGG +
Preference number: 6 (lower is better)
Translates to: PLSCGAGGLQRQ*GGHLPRCHRQG
Trigger: CCCTTGTCTGTGACAACGTGGAAGATGCCCGCCGCATTGCCTTTGGAGGCCACCAGCGCCACAAGACAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CCA 72 bp AGAGTAGACCATGCTGACAAAGGCCCGGTTGGCAGCTaGCTTGCCCACAGGAGCTCCATGGATCAGGTCCCG +
Preference number: 6 (lower is better)
Translates to: RVDHADKGPVGS*LAHRSSMDQVP
Trigger: CGGGACCTGATCCATGGAGCTCCTGTGGGCAAGCCAGCTGCCAACCGGGCCTTTGTCAGCATGGTCTACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CCA 72 bp CGCTTGATGCTTTCCATTATCTCTGCCTTTCGCTGCTaGCGGCTGCTCTCCTGGCGGTCGATGCGGGCATCC +
Preference number: 6 (lower is better)
Translates to: RLMLSIISAFRC*RLLSWRSMRAS
Trigger: GGATGCCCGCATCGACCGCCAGGAGAGCAGCCGCCAGCAGCGAAAGGCAGAGATAATGGAAAGCATCAAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CAA 72 bp GCCAGAGCTGCCACTGTCTTCTCCCCGCCTGACAAGTaGTCCATAGGCCGGAAGCGTTTCCCAGGAGCCACA +
Preference number: 6 (lower is better)
Translates to: ARAATVFSPPDK*SIGRKRFPGAT
Trigger: TGTGGCTCCTGGGAAACGCTTCCGGCCTATGGACAACTTGTCAGGCGGGGAGAAGACAGTGGCAGCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000469129.1
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS TCA 72 bp GAGTGTACCAATGCGAGGCGAGAGAGGACGCTGGGCTaGAACAGAAGTGCACCGTTTGGGACCGAAGGCCAC +
Preference number: 6 (lower is better)
Translates to: ECTNARRERTLG*NRSAPFGTEGH
Trigger: GTGGCCTTCGGTCCCAAACGGTGCACTTCTGTTTCAGCCCAGCGTCCTCTCTCGCCTCGCATTGGTACACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675504.1
CDS CAA 90 bp TGGCGCTGGTGGCCTCCAAAGGCAATGCGGCGGGCATCTTCCACGTaGTCACAGACAAGGGCATTGCCACAAGCATACTGCAGGGCCTTT +
Preference number: 6 (lower is better)
Translates to: WRWWPPKAMRRASST*SQTRALPQAYCRAF
Trigger: AAAGGCCCTGCAGTATGCTTGTGGCAATGCCCTTGTCTGTGACAACGTGGAAGATGCCCGCCGCATTGCCTTTGGAGGCCACCAGCGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS TCA 72 bp CTCAAGGCAGAGCCAAGCTCTGAACCCCTGGCTGTCTaGCTCTATGCTATACCTGACTCCCTGCGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: LKAEPSSEPLAV*LYAIPDSLRQA
Trigger: AGCCTGCCGCAGGGAGTCAGGTATAGCATAGAGTCAGACAGCCAGGGGTTCAGAGCTTGGCTCTGCCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675065.1
CDS CCA 72 bp TCTTCGTCAACTGCCCTAGGGGATCAGCCTTACCTGTaGATGGCAAAGAGCAGGGCCAGAGCTGCCACTGTC +
Preference number: 6 (lower is better)
Translates to: SSSTALGDQPYL*MAKSRARAATV
Trigger: GACAGTGGCAGCTCTGGCCCTGCTCTTTGCCATCCACAGGTAAGGCTGATCCCCTAGGGCAGTTGACGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469129.1
CDS TCA 72 bp GAGGCAAGAAGGTCTCAGGCTCCCCACGCTGCTCCTTaGTATACTGAATACAGTCCCGGCCTGTCTTCTCCG +
Preference number: 6 (lower is better)
Translates to: EARRSQAPHAAP*YTEYSPGLSSP
Trigger: CGGAGAAGACAGGCCGGGACTGTATTCAGTATATCAAGGAGCAGCGTGGGGAGCCTGAGACCTTCTTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS GCA 72 bp CTGCTCTCCTGGCGGTCGATGCGGGCATCCCCTAGCTaGTCCATCACCTGGTTCAGCTCCTTATTGATTTCA +
Preference number: 6 (lower is better)
Translates to: LLSWRSMRASPS*SITWFSSLLIS
Trigger: TGAAATCAATAAGGAGCTGAACCAGGTGATGGAGCAGCTAGGGGATGCCCGCATCGACCGCCAGGAGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CCA 72 bp AGTTGGAGTGTACCAATGCGAGGCGAGAGAGGACGCTaGGCTGAAACAGAAGTGCACCGTTTGGGACCGAAG +
Preference number: 6 (lower is better)
Translates to: SWSVPMRGERGR*AETEVHRLGPK
Trigger: CTTCGGTCCCAAACGGTGCACTTCTGTTTCAGCCCAGCGTCCTCTCTCGCCTCGCATTGGTACACTCCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675504.1
CDS CAA 90 bp CGTTCTTCCAGATCCAGACGGTCCTGGTCAGCTTTCTGGTCTCGATaGAATTTCTCCAGCTCCTGGGCCAGGGTAGCTGCTCTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: RSSRSRRSWSAFWSR*NFSSSWARVAALLL
Trigger: CAGCAAGAGAGCAGCTACCCTGGCCCAGGAGCTGGAGAAATTCAATCGAGACCAGAAAGCTGACCAGGACCGTCTGGATCTGGAAGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS TCA 72 bp GTGTCTTGGTCTGTTCTAGGTCACTCTGGGAGTACTTaGGCCGCATCTGCAGTCCATGGGCCTGAGACTGCA +
Preference number: 6 (lower is better)
Translates to: VSWSVLGHSGST*AASAVHGPETA
Trigger: TGCAGTCTCAGGCCCATGGACTGCAGATGCGGCTCAAGTACTCCCAGAGTGACCTAGAACAGACCAAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS TCA 72 bp GGAACTAAATACATGCAGAGGCCGGTGAGGACATGCTaGGCAGATGAGGGTGGATGGGGAAGACAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: GTKYMQRPVRTC*ADEGGWGRQVQ
Trigger: CTGGACCTGTCTTCCCCATCCACCCTCATCTGCTCAGCATGTCCTCACCGGCCTCTGCATGTATTTAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469129.1
CDS GCA 72 bp CAGTCCATGGGCCTGAGACTGCACCTGACGCAGCTCTaGCTCTTTCCGTTTTGCCTTCATCTGCTCTTTCAG +
Preference number: 6 (lower is better)
Translates to: QSMGLRLHLTQL*LFPFCLHLLFQ
Trigger: CTGAAAGAGCAGATGAAGGCAAAACGGAAAGAGGCAGAGCTGCGTCAGGTGCAGTCTCAGGCCCATGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS GCA 72 bp GAAGCGGTCAAAGCGCTCCTTCTTGATCTGTTCGAATaGCTGCTTGGCCTTCTTTGCTCGCTTTCGGGCTGC +
Preference number: 6 (lower is better)
Translates to: EAVKALLLDLFE*LLGLLCSLSGC
Trigger: GCAGCCCGAAAGCGAGCAAAGAAGGCCAAGCAGGCATTCGAACAGATCAAGAAGGAGCGCTTTGACCGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS GCA 72 bp AGCCTCTGGTGGCCTCAGTTCAGTCTCTTCGTCAACTaGCCTAGGGGATCAGCCTTACCTGTGGATGGCAAA +
Preference number: 6 (lower is better)
Translates to: SLWWPQFSLFVN*PRGSALPVDGK
Trigger: TTTGCCATCCACAGGTAAGGCTGATCCCCTAGGGCAGTTGACGAAGAGACTGAACTGAGGCCACCAGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469129.1
CDS CCA 72 bp GCTAGATGTCGTGTCTTGGTCTGTTCTAGGTCACTCTaGGAGTACTTGAGCCGCATCTGCAGTCCATGGGCC +
Preference number: 6 (lower is better)
Translates to: ARCRVLVCSRSL*EYLSRICSPWA
Trigger: GGCCCATGGACTGCAGATGCGGCTCAAGTACTCCCAGAGTGACCTAGAACAGACCAAGACACGACATCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CCA 72 bp CTCGGACACTTTCCAGCTTTTCCATGGCCTTCATGTTaGGGGCGGCAATACGCTGAAGCACACTCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: LGHFPAFPWPSC*GRQYAEAHSAA
Trigger: AGCAGCAGAGTGTGCTTCAGCGTATTGCCGCCCCCAACATGAAGGCCATGGAAAAGCTGGAAAGTGTCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CCA 72 bp CAAAAGTGCCGCCTCCAGAGAAGAGTAGAAAGGAGTTaGAGTGTACCAATGCGAGGCGAGAGAGGACGCTGG +
Preference number: 6 (lower is better)
Translates to: QKCRLQRRVERS*SVPMRGERGRW
Trigger: CCAGCGTCCTCTCTCGCCTCGCATTGGTACACTCCAACTCCTTTCTACTCTTCTCTGGAGGCGGCACTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375340.10
ENST00000674590.1
ENST00000675504.1
CDS CAA 72 bp AGATCCAGACGGTCCTGGTCAGCTTTCTGGTCTCGATaGAATTTCTCCAGCTCCTGGGCCAGGGTAGCTGCT +
Preference number: 6 (lower is better)
Translates to: RSRRSWSAFWSR*NFSSSWARVAA
Trigger: AGCAGCTACCCTGGCCCAGGAGCTGGAGAAATTCAATCGAGACCAGAAAGCTGACCAGGACCGTCTGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CAA 90 bp TCCAGATTCCACCAAACCATCACCTTCGCAGATCTCTGTGTATCCTaGGGCCCCAGAGCCTCTGGTGGCCTCAGTTCAGTCTCTTCGTCA +
Preference number: 6 (lower is better)
Translates to: SRFHQTITFADLCVS*GPRASGGLSSVSSS
Trigger: TGACGAAGAGACTGAACTGAGGCCACCAGAGGCTCTGGGGCCCAAGGATACACAGAGATCTGCGAAGGTGATGGTTTGGTGGAATCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469129.1
CDS TCA 72 bp TCTGATACTTCTTTTGTGTGGGCTGGCATAGGTCAATaGGGCGGCCGTACACAGAGCCAGGGTAAAGGCGCT +
Preference number: 6 (lower is better)
Translates to: SDTSFVWAGIGQ*GGRTQSQGKGA
Trigger: AGCGCCTTTACCCTGGCTCTGTGTACGGCCGCCTCATTGACCTATGCCAGCCCACACAAAAGAAGTATCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS TCA 72 bp TTTTCCATGGCCTTCATGTTGGGGGCGGCAATACGCTaGAGCACACTCTGCTGCTCATTCAGCTTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: FSMAFMLGAAIR*STLCCSFSFCC
Trigger: GCAGCAGAAGCTGAATGAGCAGCAGAGTGTGCTTCAGCGTATTGCCGCCCCCAACATGAAGGCCATGGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS GCA 72 bp CGGTCAAAGCGCTCCTTCTTGATCTGTTCGAATGCCTaGTTGGCCTTCTTTGCTCGCTTTCGGGCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: RSKRSFLICSNA*LAFFARFRAAS
Trigger: TGAAGCAGCCCGAAAGCGAGCAAAGAAGGCCAAGCAGGCATTCGAACAGATCAAGAAGGAGCGCTTTGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CCA 72 bp CCTGGAACTTGTCTCGGACACTTTCCAGCTTTTCCATaGCCTTCATGTTGGGGGCGGCAATACGCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: PGTCLGHFPAFP*PSCWGRQYAEA
Trigger: TGCTTCAGCGTATTGCCGCCCCCAACATGAAGGCCATGGAAAAGCTGGAAAGTGTCCGAGACAAGTTCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CAA 72 bp TCAAAAGTGCCGCCTCCAGAGAAGAGTAGAAAGGAGTaGGAGTGTACCAATGCGAGGCGAGAGAGGACGCTG +
Preference number: 6 (lower is better)
Translates to: SKVPPPEKSRKE*ECTNARRERTL
Trigger: CAGCGTCCTCTCTCGCCTCGCATTGGTACACTCCAACTCCTTTCTACTCTTCTCTGGAGGCGGCACTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375340.10
ENST00000674590.1
ENST00000675504.1
CDS CAA 90 bp TGCTCTTTCAGCTCCTCTGTCAAGCGCTCCTTCTTCTCTTTCAACTaGTCTACTGCTTTCTCATCCCAGCGCCGTGCCTTGGCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: CSFSSSVKRSFFSFN*STAFSSQRRALAFR
Trigger: CCTGAAGGCCAAGGCACGGCGCTGGGATGAGAAAGCAGTAGACAAGTTGAAAGAGAAGAAGGAGCGCTTGACAGAGGAGCTGAAAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS TCA 72 bp CCAGAGCCATTGGGTCCAATGATGGCGGTGAACCTCTaGAATGGTCCGATAATCTGTCGACCCTTGTACGAC +
Preference number: 6 (lower is better)
Translates to: PEPLGPMMAVNL*NGPIICRPLYD
Trigger: GTCGTACAAGGGTCGACAGATTATCGGACCATTTCAGAGGTTCACCGCCATCATTGGACCCAATGGCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000463684.1
ENST00000675065.1
CDS TCA 72 bp GCAGAGCCATTGGGTCCAATGATGGCGGTGAACCTCTaGAATGGTCCGATAATCTGTCGACCCTTGTACGAC +
Preference number: 6 (lower is better)
Translates to: AEPLGPMMAVNL*NGPIICRPLYD
Trigger: GTCGTACAAGGGTCGACAGATTATCGGACCATTTCAGAGGTTCACCGCCATCATTGGACCCAATGGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375340.10
ENST00000674590.1
CDS CCA 72 bp ATACTGCTACTGCTCATTGGGGTTGGGGTTGGCATCTaGGTACTTGGTGAGGTCGAAGGTCAGGACTTTGCT +
Preference number: 6 (lower is better)
Translates to: ILLLLIGVGVGI*VLGEVEGQDFA
Trigger: AGCAAAGTCCTGACCTTCGACCTCACCAAGTACCCAGATGCCAACCCCAACCCCAATGAGCAGTAGCAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675504.1
CDS CCA 72 bp ATGTCAAACTCAAGGCAGAGCCAAGCTCTGAACCCCTaGCTGTCTGACTCTATGCTATACCTGACTCCCTGC +
Preference number: 6 (lower is better)
Translates to: MSNSRQSQALNP*LSDSMLYLTPC
Trigger: GCAGGGAGTCAGGTATAGCATAGAGTCAGACAGCCAGGGGTTCAGAGCTTGGCTCTGCCTTGAGTTTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675065.1
CDS CAA 72 bp TCCCCTAGCTGCTCCATCACCTGGTTCAGCTCCTTATaGATTTCATCAATACGCCGCTTGGCCATCTCCACC +
Preference number: 6 (lower is better)
Translates to: SPSCSITWFSSL*ISSIRRLAIST
Trigger: GGTGGAGATGGCCAAGCGGCGTATTGATGAAATCAATAAGGAGCTGAACCAGGTGATGGAGCAGCTAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CAA 72 bp AGCTCCTCTGTCAAGCGCTCCTTCTTCTCTTTCAACTaGTCTACTGCTTTCTCATCCCAGCGCCGTGCCTTG +
Preference number: 6 (lower is better)
Translates to: SSSVKRSFFSFN*STAFSSQRRAL
Trigger: CAAGGCACGGCGCTGGGATGAGAAAGCAGTAGACAAGTTGAAAGAGAAGAAGGAGCGCTTGACAGAGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CAA 72 bp CGGGCTGCTTCAAACTCATCTGAGGTCTCCTGGAACTaGTCTCGGACACTTTCCAGCTTTTCCATGGCCTTC +
Preference number: 6 (lower is better)
Translates to: RAASNSSEVSWN*SRTLSSFSMAF
Trigger: GAAGGCCATGGAAAAGCTGGAAAGTGTCCGAGACAAGTTCCAGGAGACCTCAGATGAGTTTGAAGCAGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CAA 72 bp TACTGCTCATTGGGGTTGGGGTTGGCATCTGGGTACTaGGTGAGGTCGAAGGTCAGGACTTTGCTGATCACA +
Preference number: 6 (lower is better)
Translates to: YCSLGLGLASGY*VRSKVRTLLIT
Trigger: TGTGATCAGCAAAGTCCTGACCTTCGACCTCACCAAGTACCCAGATGCCAACCCCAACCCCAATGAGCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675504.1
CDS CAA 90 bp TCCATCACCTGGTTCAGCTCCTTATTGATTTCATCAATACGCCGCTaGGCCATCTCCACCTCCTCTGTCAGCTCCCCCTCTAGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: SITWFSSLLISSIRR*AISTSSVSSPSSFF
Trigger: GAAGAAGCTAGAGGGGGAGCTGACAGAGGAGGTGGAGATGGCCAAGCGGCGTATTGATGAAATCAATAAGGAGCTGAACCAGGTGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CAA 90 bp TCCAGCTTGGATTTTTCCTGCAGATTCAGGGCTAGATGTCGTGTCTaGGTCTGTTCTAGGTCACTCTGGGAGTACTTGAGCCGCATCTGC +
Preference number: 6 (lower is better)
Translates to: SSLDFSCRFRARCRV*VCSRSLWEYLSRIC
Trigger: GCAGATGCGGCTCAAGTACTCCCAGAGTGACCTAGAACAGACCAAGACACGACATCTAGCCCTGAATCTGCAGGAAAAATCCAAGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675504.1
CDS CAA 90 bp TTGAAGCGGTCAAAGCGCTCCTTCTTGATCTGTTCGAATGCCTGCTaGGCCTTCTTTGCTCGCTTTCGGGCTGCTTCAAACTCATCTGAG +
Preference number: 6 (lower is better)
Translates to: LKRSKRSFLICSNAC*AFFARFRAASNSSE
Trigger: CTCAGATGAGTTTGAAGCAGCCCGAAAGCGAGCAAAGAAGGCCAAGCAGGCATTCGAACAGATCAAGAAGGAGCGCTTTGACCGCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS GCA 72 bp GCATCTTACAGGCCTGTAGCAAGTTGTGACGGTCACTaGGCTTCTGTTCAAGCTTGGTCTCAATGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: ASYRPVASCDGH*ASVQAWSQWLS
Trigger: TGACAGCCATTGAGACCAAGCTTGAACAGAAGCGCAGTGACCGTCACAACTTGCTACAGGCCTGTAAGATGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CCA 72 bp GCAAGTTGTGACGGTCACTGCGCTTCTGTTCAAGCTTaGTCTCAATGGCTGTCACCTCCTTCTGTAAATGGG +
Preference number: 6 (lower is better)
Translates to: ASCDGHCASVQA*SQWLSPPSVNG
Trigger: CCCATTTACAGAAGGAGGTGACAGCCATTGAGACCAAGCTTGAACAGAAGCGCAGTGACCGTCACAACTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CCA 72 bp CGCTTTCGGGCTGCTTCAAACTCATCTGAGGTCTCCTaGAACTTGTCTCGGACACTTTCCAGCTTTTCCATG +
Preference number: 6 (lower is better)
Translates to: RFRAASNSSEVS*NLSRTLSSFSM
Trigger: CATGGAAAAGCTGGAAAGTGTCCGAGACAAGTTCCAGGAGACCTCAGATGAGTTTGAAGCAGCCCGAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CAA 72 bp AATTTCTCCAGCTCCTGGGCCAGGGTAGCTGCTCTCTaGCTGGCTTCTTCTTTCAACCGGTGGTATTTCTTC +
Preference number: 6 (lower is better)
Translates to: NFSSSWARVAAL*LASSFNRWYFF
Trigger: GAAGAAATACCACCGGTTGAAAGAAGAAGCCAGCAAGAGAGCAGCTACCCTGGCCCAGGAGCTGGAGAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CAA 72 bp TCAAAGCGCTCCTTCTTGATCTGTTCGAATGCCTGCTaGGCCTTCTTTGCTCGCTTTCGGGCTGCTTCAAAC +
Preference number: 6 (lower is better)
Translates to: SKRSFLICSNAC*AFFARFRAASN
Trigger: GTTTGAAGCAGCCCGAAAGCGAGCAAAGAAGGCCAAGCAGGCATTCGAACAGATCAAGAAGGAGCGCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CAA 90 bp GCCACAGATTCAAAACAAGCATTGAAGCGGTCAAAGCGCTCCTTCTaGATCTGTTCGAATGCCTGCTTGGCCTTCTTTGCTCGCTTTCGG +
Preference number: 6 (lower is better)
Translates to: ATDSKQALKRSKRSF*ICSNACLAFFARFR
Trigger: CCGAAAGCGAGCAAAGAAGGCCAAGCAGGCATTCGAACAGATCAAGAAGGAGCGCTTTGACCGCTTCAATGCTTGTTTTGAATCTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS TCA 72 bp CATTCAGCTTCTGCTGCAGTGTGTTCATCTCTTGCTTaGTCTCTTCCTCAGCCTGGGCATCCTTCAGATCCT +
Preference number: 6 (lower is better)
Translates to: HSASAAVCSSLA*SLPQPGHPSDP
Trigger: AGGATCTGAAGGATGCCCAGGCTGAGGAAGAGATCAAGCAAGAGATGAACACACTGCAGCAGAAGCTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS GCA 72 bp TGCTCATTCAGCTTCTGCTGCAGTGTGTTCATCTCTTaGTTGATCTCTTCCTCAGCCTGGGCATCCTTCAGA +
Preference number: 6 (lower is better)
Translates to: CSFSFCCSVFIS*LISSSAWASFR
Trigger: TCTGAAGGATGCCCAGGCTGAGGAAGAGATCAAGCAAGAGATGAACACACTGCAGCAGAAGCTGAATGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CCA 72 bp GACGGTCACTGCGCTTCTGTTCAAGCTTGGTCTCAATaGCTGTCACCTCCTTCTGTAAATGGGTCATTTCCT +
Preference number: 6 (lower is better)
Translates to: DGHCASVQAWSQ*LSPPSVNGSFP
Trigger: AGGAAATGACCCATTTACAGAAGGAGGTGACAGCCATTGAGACCAAGCTTGAACAGAAGCGCAGTGACCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675504.1
CDS TCA 72 bp TTAATGTCCTGCATCTTACAGGCCTGTAGCAAGTTGTaGCGGTCACTGCGCTTCTGTTCAAGCTTGGTCTCA +
Preference number: 6 (lower is better)
Translates to: LMSCILQACSKL*RSLRFCSSLVS
Trigger: TGAGACCAAGCTTGAACAGAAGCGCAGTGACCGTCACAACTTGCTACAGGCCTGTAAGATGCAGGACATTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS GCA 72 bp TCTAAAGACTGGAGCGCTGGGTCTGAAATTCAAAAGTaGCGCCTCCAGAGAAGAGTAGAAAGGAGTTGGAGT +
Preference number: 6 (lower is better)
Translates to: SKDWSAGSEIQK*RLQRRVERSWS
Trigger: ACTCCAACTCCTTTCTACTCTTCTCTGGAGGCGGCACTTTTGAATTTCAGACCCAGCGCTCCAGTCTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375340.10
ENST00000674590.1
ENST00000675504.1
CDS CCA 72 bp GCCATTGGGTCCAATGATGGCGGTGAACCTCTGAAATaGTCCGATAATCTGTCGACCCTTGTACGACTTAAA +
Preference number: 6 (lower is better)
Translates to: AIGSNDGGEPLK*SDNLSTLVRLK
Trigger: TTTAAGTCGTACAAGGGTCGACAGATTATCGGACCATTTCAGAGGTTCACCGCCATCATTGGACCCAATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000463684.1
ENST00000674590.1
ENST00000675065.1
CDS CCA 72 bp TCTACTTTCTTCCGTTCTTCCAGATCCAGACGGTCCTaGTCAGCTTTCTGGTCTCGATTGAATTTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: STFFRSSRSRRS*SAFWSRLNFSS
Trigger: GCTGGAGAAATTCAATCGAGACCAGAAAGCTGACCAGGACCGTCTGGATCTGGAAGAACGGAAGAAAGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CAA 72 bp TGCCGTTTCACCTTTTCTTCCTCAAACTCCCGGATGTaGCGCACACCAATCTCCCGACAAAACTCTTCAAAC +
Preference number: 6 (lower is better)
Translates to: CRFTFSSSNSRM*RTPISRQNSSN
Trigger: GTTTGAAGAGTTTTGTCGGGAGATTGGTGTGCGCAACATCCGGGAGTTTGAGGAAGAAAAGGTGAAACGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675504.1
CDS CAA 90 bp TTAAACTGTGTGTCCTCTTCAGCCTTCACCATTTCCTTCTTTCGCTaGTCATACTCCTGCGCCAGCTCCCCAGAACGACTAATCTCTTCA +
Preference number: 6 (lower is better)
Translates to: LNCVSSSAFTISFFR*SYSCASSPERLISS
Trigger: TGAAGAGATTAGTCGTTCTGGGGAGCTGGCGCAGGAGTATGACAAGCGAAAGAAGGAAATGGTGAAGGCTGAAGAGGACACACAGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000463684.1
ENST00000675504.1
CDS TCA 72 bp CAAGGGCATTGCCACAAGCATACTGCAGGGCCTTTTTaGTATGAGGTGGCTCATAGCGAATCACATCAATCA +
Preference number: 6 (lower is better)
Translates to: QGHCHKHTAGPF*YEVAHSESHQS
Trigger: TGATTGATGTGATTCGCTATGAGCCACCTCATATCAAAAAGGCCCTGCAGTATGCTTGTGGCAATGCCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CAA 72 bp TCAAAACAAGCATTGAAGCGGTCAAAGCGCTCCTTCTaGATCTGTTCGAATGCCTGCTTGGCCTTCTTTGCT +
Preference number: 6 (lower is better)
Translates to: SKQALKRSKRSF*ICSNACLAFFA
Trigger: AGCAAAGAAGGCCAAGCAGGCATTCGAACAGATCAAGAAGGAGCGCTTTGACCGCTTCAATGCTTGTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000469129.1
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CAA 90 bp CACTGTCTGCTCCCACATGTGTACTTTATCTTGGTCCTCCTTCAGTaGGTTCTTTTCAAAATCCAACTGAATGCCCAAGCGAGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: HCLLPHVYFILVLLQ*VLFKIQLNAQASLL
Trigger: CAGAAGACTCGCTTGGGCATTCAGTTGGATTTTGAAAAGAACCAACTGAAGGAGGACCAAGATAAAGTACACATGTGGGAGCAGACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675504.1
CDS TCA 72 bp TCAGATCCTCACACAGATCACCGTAGTCAATCTCAATaGGGGCCTCTCGTGCATAGATACTGGAAATTCTCT +
Preference number: 6 (lower is better)
Translates to: SDPHTDHRSQSQ*GPLVHRYWKFS
Trigger: AGAGAATTTCCAGTATCTATGCACGAGAGGCCCTCATTGAGATTGACTACGGTGATCTGTGTGAGGATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS GCA 72 bp ATTTCTTCACCTGATTCTCCTCCAACGTCAAATCTCTaGCCTGACTCTGACTCTCTTCTTCCATCCGTTCTT +
Preference number: 6 (lower is better)
Translates to: ISSPDSPPTSNL*PDSDSLLPSVL
Trigger: AAGAACGGATGGAAGAAGAGAGTCAGAGTCAGGGCAGAGATTTGACGTTGGAGGAGAATCAGGTGAAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000675504.1
CDS GCA 72 bp TTCTCAAACTCCAAACGCTTCTTGGCGATTTCATTCTaGCGTTTCACCTTTTCTTCCTCAAACTCCCGGATG +
Preference number: 6 (lower is better)
Translates to: FSNSKRFLAISF*RFTFSSSNSRM
Trigger: CATCCGGGAGTTTGAGGAAGAAAAGGTGAAACGGCAGAATGAAATCGCCAAGAAGCGTTTGGAGTTTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675504.1
CDS CCA 72 bp CCATCTCATGATTCTTGTCATTCACTTCCGACTTCTTaGCCAGATGCTGATTCTTCAGGTCTTGTAGCTGAG +
Preference number: 6 (lower is better)
Translates to: PSHDSCHSLPTS*PDADSSGLVAE
Trigger: CTCAGCTACAAGACCTGAAGAATCAGCATCTGGCCAAGAAGTCGGAAGTGAATGACAAGAATCATGAGATGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675504.1
CDS CAA 72 bp ATGATCCTCTTGATATCATTAATGCGAGGCCCAAAGTaGGCTAGCTCACTCTCCAGCTTGGATTTTTCCTGC +
Preference number: 6 (lower is better)
Translates to: MILLISLMRGPK*ASSLSSLDFSC
Trigger: GCAGGAAAAATCCAAGCTGGAGAGTGAGCTAGCCAACTTTGGGCCTCGCATTAATGATATCAAGAGGATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675504.1
CDS TCA 72 bp GTGGTGATGTATTCCTCCAGTTTCTCAATCCGCTTCTaGTTCTCTTCAATTTCCCGCAGCTTTTGCTTGATC +
Preference number: 6 (lower is better)
Translates to: VVMYSSSFSIRF*FSSISRSFCLI
Trigger: GATCAAGCAAAAGCTGCGGGAAATTGAAGAGAATCAGAAGCGGATTGAGAAACTGGAGGAATACATCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS TCA 72 bp TCCATGTTCTTGCCCAAAACCTTGGTTACAGCAATCTaGTACTTCTTTTGTGTGGGCTGGCATAGGTCAATG +
Preference number: 6 (lower is better)
Translates to: SMFLPKTLVTAI*YFFCVGWHRSM
Trigger: CATTGACCTATGCCAGCCCACACAAAAGAAGTATCAGATTGCTGTAACCAAGGTTTTGGGCAAGAACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CAA 72 bp CTGTACTCATGTAGTTGGACCACTTTGTTGTTGATCTaGTACTCAGAAGAACCTCCTACAATGACACGGGCA +
Preference number: 6 (lower is better)
Translates to: LYSCSWTTLLLI*YSEEPPTMTRA
Trigger: TGCCCGTGTCATTGTAGGAGGTTCTTCTGAGTACAAGATCAACAACAAAGTGGTCCAACTACATGAGTACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CAA 72 bp CTCCCACATGTGTACTTTATCTTGGTCCTCCTTCAGTaGGTTCTTTTCAAAATCCAACTGAATGCCCAAGCG +
Preference number: 6 (lower is better)
Translates to: LPHVYFILVLLQ*VLFKIQLNAQA
Trigger: CGCTTGGGCATTCAGTTGGATTTTGAAAAGAACCAACTGAAGGAGGACCAAGATAAAGTACACATGTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675504.1
CDS CAA 72 bp TCATCAATGTTGGTAGCCACAGATTCAAAACAAGCATaGAAGCGGTCAAAGCGCTCCTTCTTGATCTGTTCG +
Preference number: 6 (lower is better)
Translates to: SSMLVATDSKQA*KRSKRSFLICS
Trigger: CGAACAGATCAAGAAGGAGCGCTTTGACCGCTTCAATGCTTGTTTTGAATCTGTGGCTACCAACATTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000469129.1
ENST00000470241.2
ENST00000674590.1
ENST00000675504.1
CDS CAA 90 bp CCCAACTTCTCTAATTCCTCACTGTACTCATGTAGTTGGACCACTTaGTTGTTGATCTTGTACTCAGAAGAACCTCCTACAATGACACGG +
Preference number: 6 (lower is better)
Translates to: PNFSNSSLYSCSWTT*LLILYSEEPPTMTR
Trigger: CCGTGTCATTGTAGGAGGTTCTTCTGAGTACAAGATCAACAACAAAGTGGTCCAACTACATGAGTACAGTGAGGAATTAGAGAAGTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CAA 90 bp AACCGGTGGTATTTCTTCACCTGGAAAACGAGGAAGTTACGAGCTTaGATGAGAATGCCCAACTTCTCTAATTCCTCACTGTACTCATGT +
Preference number: 6 (lower is better)
Translates to: NRWYFFTWKTRKLRA*MRMPNFSNSSLYSC
Trigger: ACATGAGTACAGTGAGGAATTAGAGAAGTTGGGCATTCTCATCAAAGCTCGTAACTTCCTCGTTTTCCAGGTGAAGAAATACCACCGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674590.1
ENST00000675065.1
CDS GCA 72 bp CAAGAAATTGATGCTGTACAATCAAGCAATATAAGCTaGGGGAGTCAGACTCAAGTACTACTGGCATTCAGG +
Preference number: 6 (lower is better)
Translates to: QEIDAVQSSNIS*GSQTQVLLAFR
Trigger: CCTGAATGCCAGTAGTACTTGAGTCTGACTCCCGCAGCTTATATTGCTTGATTGTACAGCATCAATTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469129.1
CDS CAA 90 bp TTCTCTAATTCCTCACTGTACTCATGTAGTTGGACCACTTTGTTGTaGATCTTGTACTCAGAAGAACCTCCTACAATGACACGGGCAAAG +
Preference number: 6 (lower is better)
Translates to: FSNSSLYSCSWTTLL*ILYSEEPPTMTRAK
Trigger: CTTTGCCCGTGTCATTGTAGGAGGTTCTTCTGAGTACAAGATCAACAACAAAGTGGTCCAACTACATGAGTACAGTGAGGAATTAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CAA 90 bp AACTTCTCTAATTCCTCACTGTACTCATGTAGTTGGACCACTTTGTaGTTGATCTTGTACTCAGAAGAACCTCCTACAATGACACGGGCA +
Preference number: 6 (lower is better)
Translates to: NFSNSSLYSCSWTTL*LILYSEEPPTMTRA
Trigger: TGCCCGTGTCATTGTAGGAGGTTCTTCTGAGTACAAGATCAACAACAAAGTGGTCCAACTACATGAGTACAGTGAGGAATTAGAGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CAA 72 bp TCCTCACTGTACTCATGTAGTTGGACCACTTTGTTGTaGATCTTGTACTCAGAAGAACCTCCTACAATGACA +
Preference number: 6 (lower is better)
Translates to: SSLYSCSWTTLL*ILYSEEPPTMT
Trigger: TGTCATTGTAGGAGGTTCTTCTGAGTACAAGATCAACAACAAAGTGGTCCAACTACATGAGTACAGTGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CCA 72 bp CCCAACTTCTCTAATTCCTCACTGTACTCATGTAGTTaGACCACTTTGTTGTTGATCTTGTACTCAGAAGAA +
Preference number: 6 (lower is better)
Translates to: PNFSNSSLYSCS*TTLLLILYSEE
Trigger: TTCTTCTGAGTACAAGATCAACAACAAAGTGGTCCAACTACATGAGTACAGTGAGGAATTAGAGAAGTTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CAA 72 bp AATTCCTCACTGTACTCATGTAGTTGGACCACTTTGTaGTTGATCTTGTACTCAGAAGAACCTCCTACAATG +
Preference number: 6 (lower is better)
Translates to: NSSLYSCSWTTL*LILYSEEPPTM
Trigger: CATTGTAGGAGGTTCTTCTGAGTACAAGATCAACAACAAAGTGGTCCAACTACATGAGTACAGTGAGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1
CDS CAA 72 bp TCTAATTCCTCACTGTACTCATGTAGTTGGACCACTTaGTTGTTGATCTTGTACTCAGAAGAACCTCCTACA +
Preference number: 6 (lower is better)
Translates to: SNSSLYSCSWTT*LLILYSEEPPT
Trigger: TGTAGGAGGTTCTTCTGAGTACAAGATCAACAACAAAGTGGTCCAACTACATGAGTACAGTGAGGAATTAGA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322213.9
ENST00000375340.10
ENST00000674590.1
ENST00000675065.1
ENST00000675504.1