RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMARCD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000108604

Ensembl transcript IDs: ENST00000225742.13, ENST00000323347.14, ENST00000448276.7, ENST00000450364.3, ENST00000577686.1, ENST00000577990.1, ENST00000580054.1, ENST00000581832.1, ENST00000584400.5, ENST00000584483.5, ENST00000613943.4

Found 474 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCATGCTAGAGAACTGGAGTGTCCCCTCCCCGGCCCAAGCCGCTaGAGAGGCAGCCCTCTGGCATCCCAGGAGATGATGGCGGCCAGA +
Preference number: 1 (lower is better)
Translates to: GHARELECPLPGPSR*RGSPLASQEMMAAR
Trigger: TCTGGCCGCCATCATCTCCTGGGATGCCAGAGGGCTGCCTCTCCAGCGGCTTGGGCCGGGGAGGGGACACTCCAGTTCTCTAGCATGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
3UTR CCA 90 bp ATCCGAAGCTTTCGCTTTTGTGTCAGAGGCTTTTTGATGGCCTCCTaGATCTCCATCCGCTTGCGAGCAATGGTCTGGTCCAGCTTCCGC +
Preference number: 1 (lower is better)
Translates to: IRSFRFCVRGFLMAS*ISIRLRAMVWSSFR
Trigger: GCGGAAGCTGGACCAGACCATTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAAGCGAAAGCTTCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
3UTR CCA 90 bp AAAAACCAGCAGCAAGGCTGGGCTTGTAGGAATGGCAAAGAACTTTaGTTTAGAAAGGCTAGGAAGAGTCTGGGCTGCACCTCCTCTTCC +
Preference number: 1 (lower is better)
Translates to: KNQQQGWACRNGKEL*FRKARKSLGCTSSS
Trigger: GGAAGAGGAGGTGCAGCCCAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCAGCCTTGCTGCTGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
3UTR-3UTR GCA 90 bp ACAATGGGGTCTGGATGCTGCAGCAACCCTGCCAGCTTCATGGGAATCTCGGAGATGGCGGCCCTCGTCTaGGTGTGCACTCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: TMGSGCCSNPASFMGISEMAALV*VCTPSS
Trigger: GCTGCTGGGAGTGCACACGCAGACGAGGGCCGCCAT...CTCCGAGATTCCCATGAAGCTGGCAGGGTTGCTGCAGCATCCAGACCCCATTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584400.5
3UTR-3UTR CCA 90 bp ATGGCGGCCCTCGTCTGCGTGTGCACTCCCAGCAGCCTTGCCAATCGGGGGTCCTTGCGAGCAATGGTCTaGTCCAGCTTCCGCTCAAAA +
Preference number: 2 (lower is better)
Translates to: MAALVCVCTPSSLANRGSLRAMV*SSFRSK
Trigger: TTTTGAGCGGAAGCTGGACCAGACCATTGCTCGCAA...GGACCCCCGATTGGCAAGGCTGCTGGGAGTGCACACGCAGACGAGGGCCGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584400.5
3UTR-3UTR TCA 90 bp ACAATGGGGTCTGGATGCTGCAGCAACCCTGCCAGCTTCATGGGAATCTCGGAGAGTAACGGTTGCAGTTaGTGTACTCCCGCTCGTGCC +
Preference number: 2 (lower is better)
Translates to: TMGSGCCSNPASFMGISESNGCS*CTPARA
Trigger: GGCACGAGCGGGAGTACATCAACTGCAACCGTTACT...CTCCGAGATTCCCATGAAGCTGGCAGGGTTGCTGCAGCATCCAGACCCCATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584400.5
3UTR-3UTR GCA 90 bp ACAATGGGGTCTGGATGCTGCAGCAACCCTGCCAGCTTCATGGGAATCTCGGAGCACTCCCAGCAGCCTTaGCAATCGGGGGTCCAATTT +
Preference number: 2 (lower is better)
Translates to: TMGSGCCSNPASFMGISEHSQQP*QSGVQF
Trigger: AAATTGGACCCCCGATTGGCAAGGCTGCTGGGAGTG...CTCCGAGATTCCCATGAAGCTGGCAGGGTTGCTGCAGCATCCAGACCCCATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584400.5
3UTR-3UTR CCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGTCCAGGCTCCAGGGCTaGGAAGAAAGATCCCTGAGC +
Preference number: 2 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRSRLQG*EERSLS
Trigger: GCTCAGGGATCTTTCTTCCCAGCCCTGGAGCCTGGA...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
3UTR-3UTR TCA 90 bp ACAATGGGGTCTGGATGCTGCAGCAACCCTGCCAGCTTCATGGGAATCTCGGAGGTGTCAGAGGCTTTTTaGTGGCCTCCTGGATCTCCA +
Preference number: 2 (lower is better)
Translates to: TMGSGCCSNPASFMGISEVSEAF*WPPGSP
Trigger: TGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACAC...CTCCGAGATTCCCATGAAGCTGGCAGGGTTGCTGCAGCATCCAGACCCCATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584400.5
3UTR-3UTR GCA 90 bp AACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCACCCAGCCTACGTGTCTaGGGCCCCAGCAAGGACCCA +
Preference number: 2 (lower is better)
Translates to: NPAAFGSEMSYNVKAQPPPSLRV*GPSKDP
Trigger: TGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG...TGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
3UTR-3UTR GCA 90 bp AGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCCAGCCTACGTGTCTaGGGCCCCAGCAAGGACCCA +
Preference number: 2 (lower is better)
Translates to: SSLWFGNVLQCQSTASSSPSLRV*GPSKDP
Trigger: TGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG...ACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
3UTR CAA 90 bp CCCTCGCCCCAGGGGGAGTCTGTAAACATGCAAACCCAGCAGCCTTaGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: PSPQGESVNMQTQQP*VRKCLTMSKHSLQQ
Trigger: CTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTTGCATGTTTACAGACTCCCCCTGGGGCGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
3UTR-3UTR CCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTCCAGGCTCCAGGGCTaGGAAGAAAGATCCCTGAGC +
Preference number: 2 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPASRLQG*EERSLS
Trigger: GCTCAGGGATCTTTCTTCCCAGCCCTGGAGCCTGGA...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
3UTR-3UTR CCA 90 bp AACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCACAAGGACCCAGAGGGTaGTCTCCCTCCAGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: NPAAFGSEMSYNVKAQPPQGPRG*SPSRLQ
Trigger: CTGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTG...TGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
3UTR-3UTR TCA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGCTGGAGAGTAGAGGGTaGCAGCAGACACTCCTCACC +
Preference number: 2 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWLESRG*QQTLLT
Trigger: GGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAG...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
3UTR-3UTR TCA 90 bp CAGCAGCAAGGCTGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTCTGGAGAGTAGAGGGTaGCAGCAGACACTCCTCACC +
Preference number: 2 (lower is better)
Translates to: QQQGWACRNGKELWFRKALESRG*QQTLLT
Trigger: GGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAG...AGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCAGCCTTGCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
3UTR-3UTR CCA 90 bp AACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCATCCAGGCTCCAGGGCTaGGAAGAAAGATCCCTGAGC +
Preference number: 2 (lower is better)
Translates to: NPAAFGSEMSYNVKAQPPSRLQG*EERSLS
Trigger: GCTCAGGGATCTTTCTTCCCAGCCCTGGAGCCTGGA...TGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
3UTR-3UTR CCA 90 bp CTGACCCTCGCCCCAGGGGGAGTCTGTAAACATGCAAACCCAGCAGCCTTTGGTAAAAGTATAAGGCTTTaGGGACCAAGCAACAAGGAA +
Preference number: 2 (lower is better)
Translates to: LTLAPGGVCKHANPAAFGKSIRL*GPSNKE
Trigger: TTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTT...ACCAAAGGCTGCTGGGTTTGCATGTTTACAGACTCCCCCTGGGGCGAGGGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
3UTR-3UTR TCA 90 bp GTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCAGAGGAGGCATCTGCTaGACCCAATTAAAGCCAATG +
Preference number: 2 (lower is better)
Translates to: VRKCLTMSKHSLQQSYLGRGGIC*TQLKPM
Trigger: CATTGGCTTTAATTGGGTTCAGCAGATGCCTCCTCT...GCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
3UTR-3UTR GCA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTACCCAGCCTACGTGTCTaGGGCCCCAGCAAGGACCCA +
Preference number: 2 (lower is better)
Translates to: KKYKALGTKQQGILSLHLPSLRV*GPSKDP
Trigger: TGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
3UTR-3UTR CCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGAAAAGTATAAGGCTTTaGGGACCAAGCAACAAGGAA +
Preference number: 2 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRKSIRL*GPSNKE
Trigger: TTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTT...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
3UTR-3UTR CCA 90 bp CGCCTTGCTGGGACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGTTTTTGATGGCCTCCTaGATCTCCATCCGCTTGCGA +
Preference number: 2 (lower is better)
Translates to: RLAGTERIGNVDPKLSLLFLMAS*ISIRLR
Trigger: TCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAA...CAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGTCCCAGCAAGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
3UTR-3UTR CCA 90 bp GGGACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGTGTCAGAGGTTTTTGATGGCCTCCTaGATCTCCATCCGCTTGCGA +
Preference number: 2 (lower is better)
Translates to: GTERIGNVDPKLSLLCQRFLMAS*ISIRLR
Trigger: TCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAA...CCTCTGACACAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
3UTR-3UTR TCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGCTGGAGAGTAGAGGGTaGCAGCAGACACTCCTCACC +
Preference number: 2 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKLESRG*QQTLLT
Trigger: GGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAG...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
3UTR-3UTR CCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCAAAAGTATAAGGCTTTaGGGACCAAGCAACAAGGAA +
Preference number: 2 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPAKSIRL*GPSNKE
Trigger: TTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTT...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
3UTR-3UTR TCA 90 bp CTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGGGCTAGAGGAGGCATCTGCTaGACCCAATTAAAGCCAATG +
Preference number: 2 (lower is better)
Translates to: LVGMAKNFGLERLGRVWARGGIC*TQLKPM
Trigger: CATTGGCTTTAATTGGGTTCAGCAGATGCCTCCTCT...AGCCCAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
3UTR-3UTR CCA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATCCAGGCTCCAGGGCTaGGAAGAAAGATCCCTGAGC +
Preference number: 2 (lower is better)
Translates to: KKYKALGTKQQGILSLHLSRLQG*EERSLS
Trigger: GCTCAGGGATCTTTCTTCCCAGCCCTGGAGCCTGGA...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
3UTR GCA 72 bp GTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTaGGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCT +
Preference number: 3 (lower is better)
Translates to: VTADTPHPSLRV*GPSKDPEGGLP
Trigger: AGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
3UTR-3UTR CAA 90 bp ACAATGGGGTCTGGATGCTGCAGCAACCCTGCCAGCTTCATGGGAATCTCGGAGGGCCCGTACAGCTCCTaGTCCAGCTCAATGACGAGG +
Preference number: 3 (lower is better)
Translates to: TMGSGCCSNPASFMGISEGPYSS*SSSMTR
Trigger: CCTCGTCATTGAGCTGGACAAGGAGCTGTACGGGCC...CTCCGAGATTCCCATGAAGCTGGCAGGGTTGCTGCAGCATCCAGACCCCATTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584400.5
3UTR-3UTR CAA 90 bp CCCTGCAGTTCCTGCACTATCGCCTTCCGCCTTGCTGGGACTGAACGTATTGGACCGAAGCTTTCGCTTTaGTGTCAGAGGCTTTTTGAT +
Preference number: 3 (lower is better)
Translates to: PCSSCTIAFRLAGTERIGPKLSL*CQRLFD
Trigger: ATCAAAAAGCCTCTGACACAAAAGCGAAAGCTTCGG...TCCAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGCAGGAACTGCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584400.5
3UTR-3UTR CAA 90 bp GCTGGGACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGTGTCAGTGGATCTCCATCCGCTaGCGAGCAATGGTCTGGTCC +
Preference number: 3 (lower is better)
Translates to: AGTERIGNVDPKLSLLCQWISIR*RAMVWS
Trigger: GGACCAGACCATTGCTCGCAAGCGGATGGAGATCCA...CTGACACAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGTCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
3UTR-3UTR CAA 90 bp GGGACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGTGTCAGAGGTGGATCTCCATCCGCTaGCGAGCAATGGTCTGGTCC +
Preference number: 3 (lower is better)
Translates to: GTERIGNVDPKLSLLCQRWISIR*RAMVWS
Trigger: GGACCAGACCATTGCTCGCAAGCGGATGGAGATCCA...CCTCTGACACAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
3UTR-3UTR CAA 90 bp TCCTGCACTATCGCCTTCCGCCTTGCTGGGACTGAACGTATTGGAAATGTAGATTGTGTCAGAGGCTTTTaGATGGCCTCCTGGATCTCC +
Preference number: 3 (lower is better)
Translates to: SCTIAFRLAGTERIGNVDCVRGF*MASWIS
Trigger: GGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACA...ATCTACATTTCCAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
3UTR TCA 72 bp AGATCCGAAGCTTTCGCTTTTGTGTCAGAGGCTTTTTaGTGGCCTCCTGGATCTCCATCCGCTTGCGAGCAA +
Preference number: 3 (lower is better)
Translates to: RSEAFAFVSEAF*WPPGSPSACEQ
Trigger: TTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAAGCGAAAGCTTCGGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
3UTR TCA 72 bp CAGTTCCTGCACTATCGCCTTCCGCCTTGCTGGGACTaGACGTATTGGAAATGTAGATCCGAAGCTTTCGCT +
Preference number: 3 (lower is better)
Translates to: QFLHYRLPPCWD*TYWKCRSEAFA
Trigger: AGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGCAGGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
3UTR-3UTR CAA 90 bp GTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCAAAAAGTATAAGGCTTaGGGGACCAAGCAACAAGGA +
Preference number: 3 (lower is better)
Translates to: VRKCLTMSKHSLQQSYLGKKYKA*GTKQQG
Trigger: TCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT...GCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
3UTR-3UTR CAA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGAAAAAGTATAAGGCTTaGGGGACCAAGCAACAAGGA +
Preference number: 3 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWKKYKA*GTKQQG
Trigger: TCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
3UTR-3UTR CAA 90 bp AAGTGGCTCCCACATAGAAAACTTGCTCCCAAAATAGTGCAAATACCCAAAGGAAAAAAGTATAAGGCTTaGGGGACCAAGCAACAAGGA +
Preference number: 3 (lower is better)
Translates to: KWLPHRKLAPKIVQIPKGKKYKA*GTKQQG
Trigger: TCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT...TCCTTTGGGTATTTGCACTATTTTGGGAGCAAGTTTTCTATGTGGGAGCCACTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCGGCGCTGGGCAGGCATaGGAGGCTGCGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLGAGQA*EAAPGA
Trigger: TGCCCCAGGCGCAGCCTCCCATGCCTGCCCAGCGCC...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCGCTGGGCAGGCATaGGAGGCTGCGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPGAGQA*EAAPGA
Trigger: TGCCCCAGGCGCAGCCTCCCATGCCTGCCCAGCGCC...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCAGGCGCTGGGCAGGCATaGGAGGCTGCGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPGAGQA*EAAPGA
Trigger: TGCCCCAGGCGCAGCCTCCCATGCCTGCCCAGCGCC...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp CAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGGCAGGGGGTCCCACCTaGAAGCCAGCCATGGGCATC +
Preference number: 4 (lower is better)
Translates to: QPTCLRPQQGPRGWSPSRAGGPT*KPAMGI
Trigger: GATGCCCATGGCTGGCTTGCAGGTGGGACCCCCTGC...CCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCGCCCTCGTCTGCGTGTaGACTCCCAGCAGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLALVCV*TPSSLA
Trigger: GGCAAGGCTGCTGGGAGTGCACACGCAGACGAGGGC...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp GGCGGCCCTCGTCTGCGTGTGCACTCCCAGCAGCCTTGCCAATCGGGGGTCCAAATGGCGGCCCTCGTCTaGGTGTGCACTCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GGPRLRVHSQQPCQSGVQMAALV*VCTPSS
Trigger: GCTGCTGGGAGTGCACACGCAGACGAGGGCCGCCAT...TTGGACCCCCGATTGGCAAGGCTGCTGGGAGTGCACACGCAGACGAGGGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR GCA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCATGGCGGCCCTCGTCTaGGTGTGCACTCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLMAALV*VCTPSS
Trigger: GCTGCTGGGAGTGCACACGCAGACGAGGGCCGCCAT...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCACCCAGCCTACGTGTCTaGGGCCCCAGCAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPPSLRV*GPSKDP
Trigger: TGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCGGAGCCATTCCTGGATaGAGTCCTGGGGGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLGAIPG*SPGGRC
Trigger: GCACCGACCCCCAGGACTTCATCCAGGAATGGCTCC...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCTGGCATCCCAGGAGATaGTGGCGGCCAGAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLWHPRR*WRPEPL
Trigger: AAGCGGCTCTGGCCGCCATCATCTCCTGGGATGCCA...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCAGCAGGGGGTCCCACCTaGAAGCCAGCCATGGGCATC +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPAGGPT*KPAMGI
Trigger: GATGCCCATGGCTGGCTTGCAGGTGGGACCCCCTGC...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp CAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGTCCCCCAGGGGTCCCTaGAGTTCCTGCACTATCGCC +
Preference number: 4 (lower is better)
Translates to: QPTCLRPQQGPRGWSPSRSPRGP*SSCTIA
Trigger: GGCGATAGTGCAGGAACTGCAGGGACCCCTGGGGGA...CCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCAGCCCTCGTCTGCGTGTaGACTCCCAGCAGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPALVCV*TPSSLA
Trigger: GGCAAGGCTGCTGGGAGTGCACACGCAGACGAGGGC...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCAATGGCGGCCCTCGTCTaGGTGTGCACTCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPMAALV*VCTPSS
Trigger: GCTGCTGGGAGTGCACACGCAGACGAGGGCCGCCAT...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCACCCAGCCTACGTGTCTaGGGCCCCAGCAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPPSLRV*GPSKDP
Trigger: TGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCACCGCCTCCCCATGGCTaGTGCCTGCAAGGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPPPPHG*CLQGLF
Trigger: AAACAGGCCTTGCAGGCAGCAGCCATGGGGAGGCGG...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323347.14
CDS-3UTR CCA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCAGCTGCTGCACCAAATaGGGAGCCAGCAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLSCCTK*GASRGS
Trigger: GGACCCCCTGCTGGCTCCCCATTTGGTGCAGCAGCT...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCACTGTCTCCTGGGTGGTaGGCATCCGGTGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPLSPGW*ASGATP
Trigger: TGGAGTGGCACCGGATGCCCACCACCCAGGAGACAG...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp CAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTGTCTCCTGGGTGGTaGGCATCCGGTGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: QPTCLRPQQGPRGWSPSRLSPGW*ASGATP
Trigger: TGGAGTGGCACCGGATGCCCACCACCCAGGAGACAG...CCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp CAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGTCGAAGCGGAGCTGCTaGACCAAATGGGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QPTCLRPQQGPRGWSPSRSKRSC*TKWGAS
Trigger: GCTGGCTCCCCATTTGGTGCAGCAGCTCCGCTTCGA...CCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAAGGTCGAAGCGGAGCTaGTGCACCAAATGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPRSKRS*CTKWGA
Trigger: GGCTCCCCATTTGGTGCAGCAGCTCCGCTTCGACCT...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp CAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGAGGTCGAAGCGGAGCTaGTGCACCAAATGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: QPTCLRPQQGPRGWSPSRRSKRS*CTKWGA
Trigger: GGCTCCCCATTTGGTGCAGCAGCTCCGCTTCGACCT...CCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCATCCCCCAGGGGTCCCTaGAGTTCCTGCACTATCGCC +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPSPRGP*SSCTIA
Trigger: GGCGATAGTGCAGGAACTGCAGGGACCCCTGGGGGA...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAAAGCCATCTGTCTCCTaGGTGGTGGGCATCCGGTGC +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPKPSVS*VVGIRC
Trigger: GCACCGGATGCCCACCACCCAGGAGACAGATGGCTT...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp CAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGGAGGCGATCTCCTGCTaGTTGGTGGTAGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: QPTCLRPQQGPRGWSPSREAISC*LVVEAR
Trigger: TCTGGCCTCTACCACCAATCAGCAGGAGATCGCCTC...CCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCTGGAGAGTAGAGGGTaGCAGCAGACACTCCTCACC +
Preference number: 4 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLLESRG*QQTLLT
Trigger: GGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAG...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCATCATGGTGGGTGGCATaGCAGGTCGAAGCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPSWWVA*QVEAEL
Trigger: CAGCTCCGCTTCGACCTGGCATGCCACCCACCATGA...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp GGCGGCCCTCGTCTGCGTGTGCACTCCCAGCAGCCTTGCCAATCGGGGGTCCAACGCTCGTGCCCATCCTaGAGCTGGTTGTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: GGPRLRVHSQQPCQSGVQRSCPS*SWLCLM
Trigger: CATCAAGCACAACCAGCTGCAGGATGGGCACGAGCG...TTGGACCCCCGATTGGCAAGGCTGCTGGGAGTGCACACGCAGACGAGGGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR GCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAATGTACTCCCGCTCGTaGCCATCCTGCAGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPMYSRS*PSCSWL
Trigger: CAACCAGCTGCAGGATGGGCACGAGCGGGAGTACAT...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp CAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGATGTACTCCCGCTCGTaGCCATCCTGCAGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: QPTCLRPQQGPRGWSPSRMYSRS*PSCSWL
Trigger: CAACCAGCTGCAGGATGGGCACGAGCGGGAGTACAT...CCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCATGTACTCCCGCTCGTaGCCATCCTGCAGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLMYSRS*PSCSWL
Trigger: CAACCAGCTGCAGGATGGGCACGAGCGGGAGTACAT...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCATGGCAAAGATGTGCCTaGCTACTGCTTCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPWQRCA*LLLPGP
Trigger: GGGCCCAGGAAGCAGTAGGCAGGCACATCTTTGCCA...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp GGCGGCCCTCGTCTGCGTGTGCACTCCCAGCAGCCTTGCCAATCGGGGGTCCAATCCGCTTGCGAGCAATaGTCTGGTCCAGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: GGPRLRVHSQQPCQSGVQSACEQ*SGPASA
Trigger: AGCGGAAGCTGGACCAGACCATTGCTCGCAAGCGGA...TTGGACCCCCGATTGGCAAGGCTGCTGGGAGTGCACACGCAGACGAGGGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR CCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCAAAGCCATCTGTCTCCTaGGTGGTGGGCATCCGGTGC +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPKPSVS*VVGIRC
Trigger: GCACCGGATGCCCACCACCCAGGAGACAGATGGCTT...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCTCCAGGCTCCAGGGCTaGGAAGAAAGATCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLSRLQG*EERSLS
Trigger: GCTCAGGGATCTTTCTTCCCAGCCCTGGAGCCTGGA...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCATCCAGGCTCCAGGGCTaGGAAGAAAGATCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPSRLQG*EERSLS
Trigger: GCTCAGGGATCTTTCTTCCCAGCCCTGGAGCCTGGA...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAAGCTCCCGGATTCGCTaGGGTAGAACCTTATCTGCC +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPSSRIR*GRTLSA
Trigger: GGCAGATAAGGTTCTACCTCAGCGAATCCGGGAGCT...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGCAGCTGGTTGTGCTTaGTGTAAAGCCACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPAAGCA*CKATGP
Trigger: AGGCCCTGTGGCTTTACATCAAGCACAACCAGCTGC...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCGCAGCTGGTTGTGCTTaGTGTAAAGCCACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLAAGCA*CKATGP
Trigger: AGGCCCTGTGGCTTTACATCAAGCACAACCAGCTGC...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCACTGGAGAGTAGAGGGTaGCAGCAGACACTCCTCACC +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPLESRG*QQTLLT
Trigger: GGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAG...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGATCTCCATCCGCTTaGGAGCAATGGTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPGSPSA*EQWSGP
Trigger: TGGACCAGACCATTGCTCGCAAGCGGATGGAGATCC...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCACACTCCCAGCAGCCTTaGCAATCGGGGGTCCAATTT +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPHSQQP*QSGVQF
Trigger: AAATTGGACCCCCGATTGGCAAGGCTGCTGGGAGTG...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp CAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGGTACGCCTGAGACTCTaGAACAAGCTCCCGGATTCG +
Preference number: 4 (lower is better)
Translates to: QPTCLRPQQGPRGWSPSRVRLRL*NKLPDS
Trigger: CGAATCCGGGAGCTTGTTCCAGAGTCTCAGGCGTAC...CCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp ATGGCGGCCCTCGTCTGCGTGTGCACTCCCAGCAGCCTTGCCAATCGGGGGTCCGTACGCCTGAGACTCTaGAACAAGCTCCCGGATTCG +
Preference number: 4 (lower is better)
Translates to: MAALVCVCTPSSLANRGSVRLRL*NKLPDS
Trigger: CGAATCCGGGAGCTTGTTCCAGAGTCTCAGGCGTAC...GGACCCCCGATTGGCAAGGCTGCTGGGAGTGCACACGCAGACGAGGGCCGCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR CCA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCGTACGCCTGAGACTCTaGAACAAGCTCCCGGATTCG +
Preference number: 4 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLVRLRL*NKLPDS
Trigger: CGAATCCGGGAGCTTGTTCCAGAGTCTCAGGCGTAC...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCACATTTGGGCCTTCAGTaGGTCGTCCACCTCCACATC +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPHLGLQ*VVHLHI
Trigger: GATGTGGAGGTGGACGACCCACTGAAGGCCCAAATG...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCAGATCCATGTACGCCTaGGACTCTGGAACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLRSMYA*DSGTSS
Trigger: GGAGCTTGTTCCAGAGTCTCAGGCGTACATGGATCT...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp CAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGAGATCCATGTACGCCTaGGACTCTGGAACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: QPTCLRPQQGPRGWSPSRRSMYA*DSGTSS
Trigger: GGAGCTTGTTCCAGAGTCTCAGGCGTACATGGATCT...CCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp CAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGGTGTCAGAGGCTTTTTaGTGGCCTCCTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: QPTCLRPQQGPRGWSPSRVSEAF*WPPGSP
Trigger: TGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACAC...CCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCGTGTCAGAGGCTTTTTaGTGGCCTCCTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLVSEAF*WPPGSP
Trigger: TGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACAC...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCAAGTAACGGTTGCAGTTaGTGTACTCCCGCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPSNGCS*CTPARA
Trigger: GGCACGAGCGGGAGTACATCAACTGCAACCGTTACT...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGGCCCTCGTCTGCGTGTaGACTCCCAGCAGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLALVCV*TPSSLA
Trigger: GGCAAGGCTGCTGGGAGTGCACACGCAGACGAGGGC...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp CAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGACCTTGGCAAAGATGTaGCTGCCTACTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QPTCLRPQQGPRGWSPSRTLAKM*LPTASW
Trigger: CCAGGAAGCAGTAGGCAGGCACATCTTTGCCAAGGT...CCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGCCCAGCCTACGTGTCTaGGGCCCCAGCAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLPSLRV*GPSKDP
Trigger: TGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAATGGATCCATCATGGTaGGTGGCATGCCAGGTCGAA +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPMDPSW*VACQVE
Trigger: TTCGACCTGGCATGCCACCCACCATGATGGATCCAT...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGTCCTGGATGAAGTCCTaGGGGTCGGTGCTAAAACTG +
Preference number: 4 (lower is better)
Translates to: QPTCLRPQQGPRGWSPSRSWMKS*GSVLKL
Trigger: CAGTTTTAGCACCGACCCCCAGGACTTCATCCAGGA...CCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCTCCCTGACATTTCTGTaGAGCCCATCTGGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLSLTFL*SPSGSH
Trigger: GTGACTCCCAGATGGGCTCCACAGAAATGTCAGGGA...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323347.14
CDS-3UTR CCA 90 bp CTGACCCTCGCCCCAGGGGGAGTCTGTAAACATGCAAACCCAGCAGCCTTTGGTCCTGCAAGCCAGCCATaGGCATCCGGTTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LTLAPGGVCKHANPAAFGPASQP*ASGSLV
Trigger: CACCAGGGAACCGGATGCCCATGGCTGGCTTGCAGG...ACCAAAGGCTGCTGGGTTTGCATGTTTACAGACTCCCCCTGGGGCGAGGGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGAGCTGCTGCACCAAATaGGGAGCCAGCAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLSCCTK*GASRGS
Trigger: GGACCCCCTGCTGGCTCCCCATTTGGTGCAGCAGCT...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCATTGCGAGCAATGGTCTaGTCCAGCTTCCGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPLRAMV*SSFRSK
Trigger: TTTTGAGCGGAAGCTGGACCAGACCATTGCTCGCAA...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp GGCGGCCCTCGTCTGCGTGTGCACTCCCAGCAGCCTTGCCAATCGGGGGTCCAATTTTTGATGGCCTCCTaGATCTCCATCCGCTTGCGA +
Preference number: 4 (lower is better)
Translates to: GGPRLRVHSQQPCQSGVQFLMAS*ISIRLR
Trigger: TCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAA...TTGGACCCCCGATTGGCAAGGCTGCTGGGAGTGCACACGCAGACGAGGGCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR CCA 90 bp CTGACCCTCGCCCCAGGGGGAGTCTGTAAACATGCAAACCCAGCAGCCTTTGGTCTGTCTCCTGGGTGGTaGGCATCCGGTGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: LTLAPGGVCKHANPAAFGLSPGW*ASGATP
Trigger: TGGAGTGGCACCGGATGCCCACCACCCAGGAGACAG...ACCAAAGGCTGCTGGGTTTGCATGTTTACAGACTCCCCCTGGGGCGAGGGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCAGGCTGTCTTCTTCTaGTCGTTAGGGTCGACACTA +
Preference number: 4 (lower is better)
Translates to: QPTCLRPQQGPRGWSPSRQAVFF*SLGSTL
Trigger: TAGTGTCGACCCTAACGACCAGAAGAAGACAGCCTG...CCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCAGGCTGTCTTCTTCTaGTCGTTAGGGTCGACACTA +
Preference number: 4 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLQAVFF*SLGSTL
Trigger: TAGTGTCGACCCTAACGACCAGAAGAAGACAGCCTG...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCACCATTCACCTTACCCTaGCCTCCACATGCACATACC +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPPFTLP*PPHAHT
Trigger: GGTATGTGCATGTGGAGGCCAGGGTAAGGTGAATGG...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp GCCCTCGTCTGCGTGTGCACTCCCAGCAGCCTTGCCAATCGGGGGTCCAATTTGGCAGCTGGTTGTGCTTaGTGTAAAGCCACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ALVCVCTPSSLANRGSNLAAGCA*CKATGP
Trigger: AGGCCCTGTGGCTTTACATCAAGCACAACCAGCTGC...CAAATTGGACCCCCGATTGGCAAGGCTGCTGGGAGTGCACACGCAGACGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR TCA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAAGAGGAGGCATCTGCTaGACCCAATTAAAGCCAATG +
Preference number: 4 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPRGGIC*TQLKPM
Trigger: CATTGGCTTTAATTGGGTTCAGCAGATGCCTCCTCT...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGGCAGGGGGTCCCACCTaGAAGCCAGCCATGGGCATC +
Preference number: 4 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRAGGPT*KPAMGI
Trigger: GATGCCCATGGCTGGCTTGCAGGTGGGACCCCCTGC...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp CAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAATGGTCTGGCAGGGGGTCCCACCTaGAAGCCAGCCATGGGCATC +
Preference number: 4 (lower is better)
Translates to: QRLFDGLLDLHPLASNGLAGGPT*KPAMGI
Trigger: GATGCCCATGGCTGGCTTGCAGGTGGGACCCCCTGC...CAGACCATTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR GCA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGAGGTCGAAGCGGAGCTaGTGCACCAAATGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLRSKRS*CTKWGA
Trigger: GGCTCCCCATTTGGTGCAGCAGCTCCGCTTCGACCT...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGATGGCGGCCCTCGTCTaGGTGTGCACTCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRMAALV*VCTPSS
Trigger: GCTGCTGGGAGTGCACACGCAGACGAGGGCCGCCAT...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp CTTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCTCTTTAACCTGGTACTaGGCCGCGGGGCCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: LLCQRLFDGLLDLHPLASSLTWY*AAGPAG
Trigger: CCCCGCGGGCCCCGCGGCGCAGTACCAGGTTAAAGA...GCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR CCA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGATGGGAGGCTGCGCCTaGGGCACAAGCAGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLMGGCA*GTSRRF
Trigger: AAAACGCCTGCTTGTGCCCCAGGCGCAGCCTCCCAT...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TCCTGCACTATCGCCTTCCGCCTTGCTGGGACTGAACGTATTGGAAATGTAGATGGCGCTGGGCAGGCATaGGAGGCTGCGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SCTIAFRLAGTERIGNVDGAGQA*EAAPGA
Trigger: TGCCCCAGGCGCAGCCTCCCATGCCTGCCCAGCGCC...ATCTACATTTCCAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR CCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGTTTAACCCCCGGCGCTaGGCAGGCATGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRFNPRR*AGMGGC
Trigger: GCAGCCTCCCATGCCTGCCCAGCGCCGGGGGTTAAA...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCATTGCGAGCAATGGTCTaGTCCAGCTTCCGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPLRAMV*SSFRSK
Trigger: TTTTGAGCGGAAGCTGGACCAGACCATTGCTCGCAA...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCACAGGCTGTCTTCTTCTaGTCGTTAGGGTCGACACTA +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPQAVFF*SLGSTL
Trigger: TAGTGTCGACCCTAACGACCAGAAGAAGACAGCCTG...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp CTTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCTCCCGGATCCCAAGGTaGCCACTGGGCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LLCQRLFDGLLDLHPLASSRIPR*PLGRPP
Trigger: GGGAGGCCTGCCCAGTGGCCACCTTGGGATCCGGGA...GCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR TCA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGCTGGAGAGTAGAGGGTaGCAGCAGACACTCCTCACC +
Preference number: 4 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLLESRG*QQTLLT
Trigger: GGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAG...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCAAGAGGAGGCATCTGCTaGACCCAATTAAAGCCAATG +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPRGGIC*TQLKPM
Trigger: CATTGGCTTTAATTGGGTTCAGCAGATGCCTCCTCT...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGCGCTCGTGCCCATCCTaGAGCTGGTTGTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLRSCPS*SWLCLM
Trigger: CATCAAGCACAACCAGCTGCAGGATGGGCACGAGCG...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp CTGACCCTCGCCCCAGGGGGAGTCTGTAAACATGCAAACCCAGCAGCCTTTGGTATGTACTCCCGCTCGTaGCCATCCTGCAGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LTLAPGGVCKHANPAAFGMYSRS*PSCSWL
Trigger: CAACCAGCTGCAGGATGGGCACGAGCGGGAGTACAT...ACCAAAGGCTGCTGGGTTTGCATGTTTACAGACTCCCCCTGGGGCGAGGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGATGGGGTCTGGATGCTaGAGCAACCCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLMGSGC*SNPASF
Trigger: GAAGCTGGCAGGGTTGCTGCAGCATCCAGACCCCAT...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGTGGCAAAGATGTGCCTaGCTACTGCTTCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLWQRCA*LLLPGP
Trigger: GGGCCCAGGAAGCAGTAGGCAGGCACATCTTTGCCA...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGCTGTCTCCTGGGTGGTaGGCATCCGGTGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRLSPGW*ASGATP
Trigger: TGGAGTGGCACCGGATGCCCACCACCCAGGAGACAG...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCAAGAAAATTGCTCATTTaGGCCTTCAGTGGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPRKLLI*AFSGSS
Trigger: GGACGACCCACTGAAGGCCCAAATGAGCAATTTTCT...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGGAACGGAGCCATTCCTaGATGAAGTCCTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLERSHS*MKSWGS
Trigger: CGACCCCCAGGACTTCATCCAGGAATGGCTCCGTTC...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGCAAGGACCCAGAGGGTaGTCTCCCTCCAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRQGPRG*SPSRLQ
Trigger: CTGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTG...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp CTGACCCTCGCCCCAGGGGGAGTCTGTAAACATGCAAACCCAGCAGCCTTTGGTCCTGCAAGGCCTGTTTaGCAGCTCTGCCTTGCACAC +
Preference number: 4 (lower is better)
Translates to: LTLAPGGVCKHANPAAFGPARPV*QLCLAH
Trigger: GTGTGCAAGGCAGAGCTGCCAAACAGGCCTTGCAGG...ACCAAAGGCTGCTGGGTTTGCATGTTTACAGACTCCCCCTGGGGCGAGGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323347.14
CDS-3UTR CCA 90 bp GTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCCCGGCCCAAGCCGCTaGAGAGGCAGCCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: VRKCLTMSKHSLQQSYLGPGPSR*RGSPLA
Trigger: TGCCAGAGGGCTGCCTCTCCAGCGGCTTGGGCCGGG...GCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CTGACCCTCGCCCCAGGGGGAGTCTGTAAACATGCAAACCCAGCAGCCTTTGGTCAAACCTGCCAGATGTaGCACTCGCCAAGCCCTAGG +
Preference number: 4 (lower is better)
Translates to: LTLAPGGVCKHANPAAFGQTCQM*HSPSPR
Trigger: CCTAGGGCTTGGCGAGTGCCACATCTGGCAGGTTTG...ACCAAAGGCTGCTGGGTTTGCATGTTTACAGACTCCCCCTGGGGCGAGGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAATGGTCTGTCCTCCTCTTTAACCTaGTACTGCGCCGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: QRLFDGLLDLHPLASNGLSSSLT*YCAAGP
Trigger: GGGCCCCGCGGCGCAGTACCAGGTTAAAGAGGAGGA...CAGACCATTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR TCA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGAGCTCCCGGATTCGCTaGGGTAGAACCTTATCTGCC +
Preference number: 4 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLSSRIR*GRTLSA
Trigger: GGCAGATAAGGTTCTACCTCAGCGAATCCGGGAGCT...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp CTGACCCTCGCCCCAGGGGGAGTCTGTAAACATGCAAACCCAGCAGCCTTTGGTAGCTCCCGGATTCGCTaGGGTAGAACCTTATCTGCC +
Preference number: 4 (lower is better)
Translates to: LTLAPGGVCKHANPAAFGSSRIR*GRTLSA
Trigger: GGCAGATAAGGTTCTACCTCAGCGAATCCGGGAGCT...ACCAAAGGCTGCTGGGTTTGCATGTTTACAGACTCCCCCTGGGGCGAGGGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp CAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAATGGTCTGTGCCACTCCACCAGGTaGTTGTCAGGCCCGTACAGC +
Preference number: 4 (lower is better)
Translates to: QRLFDGLLDLHPLASNGLCHSTR*LSGPYS
Trigger: GCTGTACGGGCCTGACAATCACCTGGTGGAGTGGCA...CAGACCATTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR TCA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGGCAGCTGGTTGTGCTTaGTGTAAAGCCACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLAAGCA*CKATGP
Trigger: AGGCCCTGTGGCTTTACATCAAGCACAACCAGCTGC...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGGGAGTCGGCCACAACTaGAGATCTGGCGGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLGVGHN*RSGGSN
Trigger: GTTACTTCCGCCAGATCTTCAGTTGTGGCCGACTCC...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGTCATGGTGGGTGGCATaGCAGGTCGAAGCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRSWWVA*QVEAEL
Trigger: CAGCTCCGCTTCGACCTGGCATGCCACCCACCATGA...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp CTGACCCTCGCCCCAGGGGGAGTCTGTAAACATGCAAACCCAGCAGCCTTTGGTCACTCCCAGCAGCCTTaGCAATCGGGGGTCCAATTT +
Preference number: 4 (lower is better)
Translates to: LTLAPGGVCKHANPAAFGHSQQP*QSGVQF
Trigger: AAATTGGACCCCCGATTGGCAAGGCTGCTGGGAGTG...ACCAAAGGCTGCTGGGTTTGCATGTTTACAGACTCCCCCTGGGGCGAGGGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCGCCCTCGTCTGCGTGTaGACTCCCAGCAGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPAALVCV*TPSSLA
Trigger: GGCAAGGCTGCTGGGAGTGCACACGCAGACGAGGGC...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCCCCAGCCTACGTGTCTaGGGCCCCAGCAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPAPSLRV*GPSKDP
Trigger: TGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGGGTTCCCTGGTGACATaGCAGGTCGCTGGTACTGCG +
Preference number: 4 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRGSLVT*QVAGTA
Trigger: CGCAGTACCAGCGACCTGGCATGTCACCAGGGAACC...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CTTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAGCTGCTGCACCAAATaGGGAGCCAGCAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLCQRLFDGLLDLHPLASSCCTK*GASRGS
Trigger: GGACCCCCTGCTGGCTCCCCATTTGGTGCAGCAGCT...GCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR CCA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGGGAATGGATCCATCATaGTGGGTGGCATGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLGMDPS*WVACQV
Trigger: GACCTGGCATGCCACCCACCATGATGGATCCATTCC...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGATGGGAGGCTGCGCCTaGGGCACAAGCAGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRMGGCA*GTSRRF
Trigger: AAAACGCCTGCTTGTGCCCCAGGCGCAGCCTCCCAT...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTTTAACCCCCGGCGCTaGGCAGGCATGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPAFNPRR*AGMGGC
Trigger: GCAGCCTCCCATGCCTGCCCAGCGCCGGGGGTTAAA...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CTTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCCTGTCTCCTGGGTGGTaGGCATCCGGTGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: LLCQRLFDGLLDLHPLASLSPGW*ASGATP
Trigger: TGGAGTGGCACCGGATGCCCACCACCCAGGAGACAG...GCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR CCA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGGATGACAATGGGGTCTaGATGCTGCAGCAACCCTGC +
Preference number: 4 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLDDNGV*MLQQPC
Trigger: GCAGGGTTGCTGCAGCATCCAGACCCCATTGTCATC...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCAGACTCAATGGTCTCATaGATCTTGACATCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPDSMVS*ILTSRE
Trigger: CTCCCTTGATGTCAAGATCCATGAGACCATTGAGTC...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGACATGCCAGGTCGCTaGTACTGCGCCGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWDMPGR*YCAAGP
Trigger: GGGCCCCGCGGCGCAGTACCAGCGACCTGGCATGTC...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCACCCGGCCCAAGCCGCTaGAGAGGCAGCCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: NPAAFGSEMSYNVKAQPPPGPSR*RGSPLA
Trigger: TGCCAGAGGGCTGCCTCTCCAGCGGCTTGGGCCGGG...TGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp CCCTGCAGTTCCTGCACTATCGCCTTCCGCCTTGCTGGGACTGAACGTATTGGAGGAGTCGGCCACAACTaGAGATCTGGCGGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: PCSSCTIAFRLAGTERIGGVGHN*RSGGSN
Trigger: GTTACTTCCGCCAGATCTTCAGTTGTGGCCGACTCC...TCCAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGCAGGAACTGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR TCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCGGAGCCATTCCTGGATaGAGTCCTGGGGGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPAGAIPG*SPGGRC
Trigger: GCACCGACCCCCAGGACTTCATCCAGGAATGGCTCC...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp TTTCGCTTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGGCCCTCGTCTGCGTGTaGACTCCCAGCAGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: FRFCVRGFLMASWISIRLALVCV*TPSSLA
Trigger: GGCAAGGCTGCTGGGAGTGCACACGCAGACGAGGGC...CAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAAGCGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR GCA 90 bp GTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCATGGCGGCCCTCGTCTaGGTGTGCACTCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VRKCLTMSKHSLQQSYLGMAALV*VCTPSS
Trigger: GCTGCTGGGAGTGCACACGCAGACGAGGGCCGCCAT...GCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp CTGACCCTCGCCCCAGGGGGAGTCTGTAAACATGCAAACCCAGCAGCCTTTGGTAGTTCCTGCCTTCGCTaGTGCACCTTGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: LTLAPGGVCKHANPAAFGSSCLR*CTLAKM
Trigger: CATCTTTGCCAAGGTGCAGCAGCGAAGGCAGGAACT...ACCAAAGGCTGCTGGGTTTGCATGTTTACAGACTCCCCCTGGGGCGAGGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCCCTGCAAGCCAGCCATaGGCATCCGGTTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPAPASQP*ASGSLV
Trigger: CACCAGGGAACCGGATGCCCATGGCTGGCTTGCAGG...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCAGCTGCTGCACCAAATaGGGAGCCAGCAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPASCCTK*GASRGS
Trigger: GGACCCCCTGCTGGCTCCCCATTTGGTGCAGCAGCT...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CTGACCCTCGCCCCAGGGGGAGTCTGTAAACATGCAAACCCAGCAGCCTTTGGTCAGGCGTTTTCGGAATaGATCCATCATGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LTLAPGGVCKHANPAAFGQAFSE*IHHGGW
Trigger: CCACCCACCATGATGGATCCATTCCGAAAACGCCTG...ACCAAAGGCTGCTGGGTTTGCATGTTTACAGACTCCCCCTGGGGCGAGGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGGGCGCTGGGCAGGCATaGGAGGCTGCGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: WACRNGKELWFRKARKSLGAGQA*EAAPGA
Trigger: TGCCCCAGGCGCAGCCTCCCATGCCTGCCCAGCGCC...CAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TTTCGCTTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGTTTAACCCCCGGCGCTaGGCAGGCATGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: FRFCVRGFLMASWISIRLFNPRR*AGMGGC
Trigger: GCAGCCTCCCATGCCTGCCCAGCGCCGGGGGTTAAA...CAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAAGCGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR CCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGTCCGCTTGCGAGCAATaGTCTGGTCCAGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRSACEQ*SGPASA
Trigger: AGCGGAAGCTGGACCAGACCATTGCTCGCAAGCGGA...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CTGACCCTCGCCCCAGGGGGAGTCTGTAAACATGCAAACCCAGCAGCCTTTGGTACCCTGCCAGCTTCATaGGAATCTCGGAGAAACGGA +
Preference number: 4 (lower is better)
Translates to: LTLAPGGVCKHANPAAFGTLPAS*ESRRNG
Trigger: TCCGTTTCTCCGAGATTCCCATGAAGCTGGCAGGGT...ACCAAAGGCTGCTGGGTTTGCATGTTTACAGACTCCCCCTGGGGCGAGGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCCAAGGACCCAGAGGGTaGTCTCCCTCCAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPAQGPRG*SPSRLQ
Trigger: CTGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTG...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCAAAAGTATAAGGCTTTaGGGACCAAGCAACAAGGAA +
Preference number: 4 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLKSIRL*GPSNKE
Trigger: TTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTT...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCAAAACCCAGCAGCCTTTaGTTCGGAAATGTCTTACAA +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPKPSSL*FGNVLQ
Trigger: TTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTT...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TCCTGCACTATCGCCTTCCGCCTTGCTGGGACTGAACGTATTGGAAATGTAGATTCCCAAGGTGGCCACTaGGCAGGCCTCCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: SCTIAFRLAGTERIGNVDSQGGH*AGLPGV
Trigger: GACACCTGGGAGGCCTGCCCAGTGGCCACCTTGGGA...ATCTACATTTCCAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR TCA 90 bp CAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAATGGTCTGAGTAACGGTTGCAGTTaGTGTACTCCCGCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: QRLFDGLLDLHPLASNGLSNGCS*CTPARA
Trigger: GGCACGAGCGGGAGTACATCAACTGCAACCGTTACT...CAGACCATTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR TCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGGGAGTCGGCCACAACTaGAGATCTGGCGGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRGVGHN*RSGGSN
Trigger: GTTACTTCCGCCAGATCTTCAGTTGTGGCCGACTCC...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp GCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCGGAGCCATTCCTGGATaGAGTCCTGGGGGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: AAFGSEMSYNVKAQPPAVGAIPG*SPGGRC
Trigger: GCACCGACCCCCAGGACTTCATCCAGGAATGGCTCC...GACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp AAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTCATCCGGTTCCCTGGTaGCATGCCAGGTCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KCLTMSKHSLQQSYLGLPHPVPW*HARSLR
Trigger: CCTCAGCGACCTGGCATGTCACCAGGGAACCGGATG...AGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323347.14
CDS-3UTR TCA 90 bp GTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCTGGCATCCCAGGAGATaGTGGCGGCCAGAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: VRKCLTMSKHSLQQSYLGWHPRR*WRPEPL
Trigger: AAGCGGCTCTGGCCGCCATCATCTCCTGGGATGCCA...GCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp CAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAATGGTCTGCACTCCCAGCAGCCTTaGCAATCGGGGGTCCAATTT +
Preference number: 4 (lower is better)
Translates to: QRLFDGLLDLHPLASNGLHSQQP*QSGVQF
Trigger: AAATTGGACCCCCGATTGGCAAGGCTGCTGGGAGTG...CAGACCATTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR GCA 90 bp CTTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCATGTACTCCCGCTCGTaGCCATCCTGCAGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LLCQRLFDGLLDLHPLASMYSRS*PSCSWL
Trigger: CAACCAGCTGCAGGATGGGCACGAGCGGGAGTACAT...GCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR GCA 90 bp AAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGATGTGCCTGCCTACTaGTTCCTGGGCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KCLTMSKHSLQQSYLGLPDVPAY*FLGPGL
Trigger: CAGCCCTGGGCCCAGGAAGCAGTAGGCAGGCACATC...AGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGACCCTGGCCTCCACATaGACATACCCCATACCTCAG +
Preference number: 4 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRTLAST*TYPIPQ
Trigger: CTGAGGTATGGGGTATGTGCATGTGGAGGCCAGGGT...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TCCTGCACTATCGCCTTCCGCCTTGCTGGGACTGAACGTATTGGAAATGTAGATCCTGCAAGCCAGCCATaGGCATCCGGTTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SCTIAFRLAGTERIGNVDPASQP*ASGSLV
Trigger: CACCAGGGAACCGGATGCCCATGGCTGGCTTGCAGG...ATCTACATTTCCAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR CCA 90 bp AAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTAGCTGCTGCACCAAATaGGGAGCCAGCAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: KCLTMSKHSLQQSYLGLPSCCTK*GASRGS
Trigger: GGACCCCCTGCTGGCTCCCCATTTGGTGCAGCAGCT...AGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAATGATCCATCATGGTGGGTaGCATGCCAGGTCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: CVRGFLMASWISIRLRAMIHHGG*HARSKR
Trigger: CCGCTTCGACCTGGCATGCCACCCACCATGATGGAT...CATTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR CCA 90 bp TTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAATGGGAGGCTGCGCCTaGGGCACAAGCAGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: FCVRGFLMASWISIRLRAMGGCA*GTSRRF
Trigger: AAAACGCCTGCTTGTGCCCCAGGCGCAGCCTCCCAT...TGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR CCA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCAAAAAGTATAAGGCTTTaGGGACCAAGCAACAAGGAA +
Preference number: 4 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPKSIRL*GPSNKE
Trigger: TTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTT...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGAGGCTAGGAAGAGTCTaGGCTGCACCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRRLGRV*AAPPLP
Trigger: AGGAAGAGGAGGTGCAGCCCAGACTCTTCCTAGCCT...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp CAAACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCATCCGGTTCCCTGGTaGCATGCCAGGTCGTCGAGG +
Preference number: 4 (lower is better)
Translates to: QTQQPLVRKCLTMSKHSLHPVPW*HARSSR
Trigger: CCTCGACGACCTGGCATGTCACCAGGGAACCGGATG...GAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225742.13
CDS-3UTR TCA 90 bp CAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAATGGTCTGGTGTCAGAGGCTTTTTaGTGGCCTCCTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: QRLFDGLLDLHPLASNGLVSEAF*WPPGSP
Trigger: TGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACAC...CAGACCATTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR GCA 90 bp GTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCAGGTCGAAGCGGAGCTaGTGCACCAAATGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: VRKCLTMSKHSLQQSYLGRSKRS*CTKWGA
Trigger: GGCTCCCCATTTGGTGCAGCAGCTCCGCTTCGACCT...GCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp AGTTCCTGCACTATCGCCTTCCGCCTTGCTGGGACTGAACGTATTGGAAATGTATCATGGTGGGTGGCATaGCAGGTCGAAGCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSCTIAFRLAGTERIGNVSWWVA*QVEAEL
Trigger: CAGCTCCGCTTCGACCTGGCATGCCACCCACCATGA...TACATTTCCAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGCAGGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR GCA 90 bp CAAACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCTCCCCCAGGGGTCCCTaGAGTTCCTGCACTATCGCC +
Preference number: 4 (lower is better)
Translates to: QTQQPLVRKCLTMSKHSLSPRGP*SSCTIA
Trigger: GGCGATAGTGCAGGAACTGCAGGGACCCCTGGGGGA...GAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCCGCTCGTGCCCATCCTaGAGCTGGTTGTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPARSCPS*SWLCLM
Trigger: CATCAAGCACAACCAGCTGCAGGATGGGCACGAGCG...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp TTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAATGGGGTCTGGATGCTaGAGCAACCCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FCVRGFLMASWISIRLRAMGSGC*SNPASF
Trigger: GAAGCTGGCAGGGTTGCTGCAGCATCCAGACCCCAT...TGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR GCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGGCAAAGATGTGCCTaGCTACTGCTTCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPAWQRCA*LLLPGP
Trigger: GGGCCCAGGAAGCAGTAGGCAGGCACATCTTTGCCA...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGACCTTGGCAAAGATGTaGCTGCCTACTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRTLAKM*LPTASW
Trigger: CCAGGAAGCAGTAGGCAGGCACATCTTTGCCAAGGT...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp AGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTGCAAGCCAGCCATaGGCATCCGGTTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SSLWFGNVLQCQSTASSSPASQP*ASGSLV
Trigger: CACCAGGGAACCGGATGCCCATGGCTGGCTTGCAGG...ACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CAGCAGCAAGGCTGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTCCTGCAAGCCAGCCATaGGCATCCGGTTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: QQQGWACRNGKELWFRKAPASQP*ASGSLV
Trigger: CACCAGGGAACCGGATGCCCATGGCTGGCTTGCAGG...AGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCAGCCTTGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAATGGGAATGGATCCATCATaGTGGGTGGCATGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: CVRGFLMASWISIRLRAMGMDPS*WVACQV
Trigger: GACCTGGCATGCCACCCACCATGATGGATCCATTCC...CATTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR CCA 90 bp AAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTATGGGAGGCTGCGCCTaGGGCACAAGCAGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: KCLTMSKHSLQQSYLGLPMGGCA*GTSRRF
Trigger: AAAACGCCTGCTTGTGCCCCAGGCGCAGCCTCCCAT...AGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTAAGCCATCTGTCTCCTaGGTGGTGGGCATCCGGTGC +
Preference number: 4 (lower is better)
Translates to: KCLTMSKHSLQQSYLGLPKPSVS*VVGIRC
Trigger: GCACCGGATGCCCACCACCCAGGAGACAGATGGCTT...AGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGACCCTGCCAGCTTCATaGGAATCTCGGAGAAACGGA +
Preference number: 4 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRTLPAS*ESRRNG
Trigger: TCCGTTTCTCCGAGATTCCCATGAAGCTGGCAGGGT...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp CTTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCGATGACAATGGGGTCTaGATGCTGCAGCAACCCTGC +
Preference number: 4 (lower is better)
Translates to: LLCQRLFDGLLDLHPLASDDNGV*MLQQPC
Trigger: GCAGGGTTGCTGCAGCATCCAGACCCCATTGTCATC...GCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR CCA 90 bp GCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCTTGAGGTCTCGGCGCTaGGAACGGAGCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: AAFGSEMSYNVKAQPPAVLRSRR*ERSHSW
Trigger: CCAGGAATGGCTCCGTTCCCAGCGCCGAGACCTCAA...GACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTTCTGTGGAGCCCATCTaGGAGTCACCTCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: KCLTMSKHSLQQSYLGLPSVEPI*ESPPPP
Trigger: TGGGGGTGGAGGTGACTCCCAGATGGGCTCCACAGA...AGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323347.14
CDS-3UTR CCA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCATGCTAGAGAACTaGAGTGTCCCCTCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWAMLEN*SVPSPA
Trigger: GGCCGGGGAGGGGACACTCCAGTTCTCTAGCATGGC...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp TTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAAGCTCCCGGATTCGCTaGGGTAGAACCTTATCTGCC +
Preference number: 4 (lower is better)
Translates to: FCVRGFLMASWISIRLRASSRIR*GRTLSA
Trigger: GGCAGATAAGGTTCTACCTCAGCGAATCCGGGAGCT...TGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR TCA 90 bp TGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAATGAGATCCATGTACGCCTaGGACTCTGGAACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: CVRGFLMASWISIRLRAMRSMYA*DSGTSS
Trigger: GGAGCTTGTTCCAGAGTCTCAGGCGTACATGGATCT...CATTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR TCA 90 bp AACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCATGCCACTCCACCAGGTaGTTGTCAGGCCCGTACAGC +
Preference number: 4 (lower is better)
Translates to: NPAAFGSEMSYNVKAQPPCHSTR*LSGPYS
Trigger: GCTGTACGGGCCTGACAATCACCTGGTGGAGTGGCA...TGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCGCAGCTGGTTGTGCTTaGTGTAAAGCCACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPAAAGCA*CKATGP
Trigger: AGGCCCTGTGGCTTTACATCAAGCACAACCAGCTGC...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp AAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGAGGCGATCTCCTGCTaGTTGGTGGTAGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: KCLTMSKHSLQQSYLGLPEAISC*LVVEAR
Trigger: TCTGGCCTCTACCACCAATCAGCAGGAGATCGCCTC...AGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp CAAACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCATCCGGTTCCCTGGTaGCATGCCAGGTCGCTGGTA +
Preference number: 4 (lower is better)
Translates to: QTQQPLVRKCLTMSKHSLHPVPW*HARSLV
Trigger: TACCAGCGACCTGGCATGTCACCAGGGAACCGGATG...GAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp AACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCATCGAAGCGGAGCTGCTaGACCAAATGGGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: NPAAFGSEMSYNVKAQPPSKRSC*TKWGAS
Trigger: GCTGGCTCCCCATTTGGTGCAGCAGCTCCGCTTCGA...TGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp CAAACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCTCATGGTGGGTGGCATaGCAGGTCGAAGCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QTQQPLVRKCLTMSKHSLSWWVA*QVEAEL
Trigger: CAGCTCCGCTTCGACCTGGCATGCCACCCACCATGA...GAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp TTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAGGATCTCCATCCGCTTaGGAGCAATGGTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: FCVRGFLMASWISIRLRAGSPSA*EQWSGP
Trigger: TGGACCAGACCATTGCTCGCAAGCGGATGGAGATCC...TGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR GCA 90 bp AAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTATGGGGTCTGGATGCTaGAGCAACCCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KCLTMSKHSLQQSYLGLPMGSGC*SNPASF
Trigger: GAAGCTGGCAGGGTTGCTGCAGCATCCAGACCCCAT...AGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp CAAACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCGGTTCCCTGGTGACATaGCAGGTCGCTGAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QTQQPLVRKCLTMSKHSLGSLVT*QVAEAL
Trigger: CAAGGCCTCAGCGACCTGGCATGTCACCAGGGAACC...GAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323347.14
CDS-3UTR CCA 90 bp GTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCATCCATCATGGTGGGTaGCATGCCAGGTCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: VRKCLTMSKHSLQQSYLGIHHGG*HARSKR
Trigger: CCGCTTCGACCTGGCATGCCACCCACCATGATGGAT...GCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGGGCTTTTAACCCCCGGCGCTaGGCAGGCATGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LVGMAKNFGLERLGRVWAFNPRR*AGMGGC
Trigger: GCAGCCTCCCATGCCTGCCCAGCGCCGGGGGTTAAA...AGCCCAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TTTCGCTTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGTCCGCTTGCGAGCAATaGTCTGGTCCAGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: FRFCVRGFLMASWISIRLSACEQ*SGPASA
Trigger: AGCGGAAGCTGGACCAGACCATTGCTCGCAAGCGGA...CAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAAGCGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR CCA 90 bp AAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTTCCGCTTGCGAGCAATaGTCTGGTCCAGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: KCLTMSKHSLQQSYLGLPSACEQ*SGPASA
Trigger: AGCGGAAGCTGGACCAGACCATTGCTCGCAAGCGGA...AGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGTTTTTGATGGCCTCCTaGATCTCCATCCGCTTGCGA +
Preference number: 4 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRFLMAS*ISIRLR
Trigger: TCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAA...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTAAGCCATCTGTCTCCTaGGTGGTGGGCATCCGGTGC +
Preference number: 4 (lower is better)
Translates to: SSLWFGNVLQCQSTASSSKPSVS*VVGIRC
Trigger: GCACCGGATGCCCACCACCCAGGAGACAGATGGCTT...ACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CAGCAGCAAGGCTGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAAGCCATCTGTCTCCTaGGTGGTGGGCATCCGGTGC +
Preference number: 4 (lower is better)
Translates to: QQQGWACRNGKELWFRKAKPSVS*VVGIRC
Trigger: GCACCGGATGCCCACCACCCAGGAGACAGATGGCTT...AGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCAGCCTTGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCATTGAGGTCTCGGCGCTaGGAACGGAGCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: NPAAFGSEMSYNVKAQPPLRSRR*ERSHSW
Trigger: CCAGGAATGGCTCCGTTCCCAGCGCCGAGACCTCAA...TGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGTTGAGGTCTCGGCGCTaGGAACGGAGCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWLRSRR*ERSHSW
Trigger: CCAGGAATGGCTCCGTTCCCAGCGCCGAGACCTCAA...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CAAACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCTTGAGGTCTCGGCGCTaGGAACGGAGCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: QTQQPLVRKCLTMSKHSLLRSRR*ERSHSW
Trigger: CCAGGAATGGCTCCGTTCCCAGCGCCGAGACCTCAA...GAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTTCCAGGCTCCAGGGCTaGGAAGAAAGATCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: KCLTMSKHSLQQSYLGLPSRLQG*EERSLS
Trigger: GCTCAGGGATCTTTCTTCCCAGCCCTGGAGCCTGGA...AGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCAGGCTAGGAAGAGTCTaGGCTGCACCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPARLGRV*AAPPLP
Trigger: AGGAAGAGGAGGTGCAGCCCAGACTCTTCCTAGCCT...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp AAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGCTGGTTGTGCTTaGTGTAAAGCCACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: KCLTMSKHSLQQSYLGLPAAGCA*CKATGP
Trigger: AGGCCCTGTGGCTTTACATCAAGCACAACCAGCTGC...AGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp GCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCAGTAACGGTTGCAGTTaGTGTACTCCCGCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: AAFGSEMSYNVKAQPPAVSNGCS*CTPARA
Trigger: GGCACGAGCGGGAGTACATCAACTGCAACCGTTACT...GACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp TGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGGGAGCCATTCCTGGATaGAGTCCTGGGGGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: WACRNGKELWFRKARKSLGAIPG*SPGGRC
Trigger: GCACCGACCCCCAGGACTTCATCCAGGAATGGCTCC...CAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp GCTGGGACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGTGTCAGTCGAAGCGGAGCTGCTaGACCAAATGGGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: AGTERIGNVDPKLSLLCQSKRSC*TKWGAS
Trigger: GCTGGCTCCCCATTTGGTGCAGCAGCTCCGCTTCGA...CTGACACAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR GCA 90 bp AAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGGATCTCCATCCGCTTaGGAGCAATGGTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: KCLTMSKHSLQQSYLGLPGSPSA*EQWSGP
Trigger: TGGACCAGACCATTGCTCGCAAGCGGATGGAGATCC...AGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp TCCTGCACTATCGCCTTCCGCCTTGCTGGGACTGAACGTATTGGAAATGTAGATGGATCTCCATCCGCTTaGGAGCAATGGTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SCTIAFRLAGTERIGNVDGSPSA*EQWSGP
Trigger: TGGACCAGACCATTGCTCGCAAGCGGATGGAGATCC...ATCTACATTTCCAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR GCA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGGTCCCTGCAGTTCCTaGACTATCGCCTTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWGPCSS*TIAFRL
Trigger: AAGGCGGAAGGCGATAGTGCAGGAACTGCAGGGACC...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp CGCCTTGCTGGGACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGGGTCCCTGCAGTTCCTaGACTATCGCCTTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: RLAGTERIGNVDPKLSLLGPCSS*TIAFRL
Trigger: AAGGCGGAAGGCGATAGTGCAGGAACTGCAGGGACC...CAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGTCCCAGCAAGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR GCA 90 bp AGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTGGTCCCTGCAGTTCCTaGACTATCGCCTTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: SSLWFGNVLQCQSTASSSGPCSS*TIAFRL
Trigger: AAGGCGGAAGGCGATAGTGCAGGAACTGCAGGGACC...ACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp AACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCACGCTCGTGCCCATCCTaGAGCTGGTTGTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: NPAAFGSEMSYNVKAQPPRSCPS*SWLCLM
Trigger: CATCAAGCACAACCAGCTGCAGGATGGGCACGAGCG...TGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp CAAACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCATGTACTCCCGCTCGTaGCCATCCTGCAGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: QTQQPLVRKCLTMSKHSLMYSRS*PSCSWL
Trigger: CAACCAGCTGCAGGATGGGCACGAGCGGGAGTACAT...GAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp CAGCAGCAAGGCTGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTATGGGGTCTGGATGCTaGAGCAACCCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QQQGWACRNGKELWFRKAMGSGC*SNPASF
Trigger: GAAGCTGGCAGGGTTGCTGCAGCATCCAGACCCCAT...AGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCAGCCTTGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp TGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGGATGTGCCTGCCTACTaGTTCCTGGGCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: WACRNGKELWFRKARKSLDVPAY*FLGPGL
Trigger: CAGCCCTGGGCCCAGGAAGCAGTAGGCAGGCACATC...CAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGTGGCAAAGATGTGCCTaGCTACTGCTTCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWWQRCA*LLLPGP
Trigger: GGGCCCAGGAAGCAGTAGGCAGGCACATCTTTGCCA...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCACCTTGGCAAAGATGTaGCTGCCTACTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPATLAKM*LPTASW
Trigger: CCAGGAAGCAGTAGGCAGGCACATCTTTGCCAAGGT...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp AACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAATCCATCATGGTGGGTaGCATGCCAGGTCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: NPAAFGSEMSYNVKAQPPIHHGG*HARSKR
Trigger: CCGCTTCGACCTGGCATGCCACCCACCATGATGGAT...TGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGGAATGGATCCATCATaGTGGGTGGCATGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KCLTMSKHSLQQSYLGLPGMDPS*WVACQV
Trigger: GACCTGGCATGCCACCCACCATGATGGATCCATTCC...AGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp GCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCGTACGCCTGAGACTCTaGAACAAGCTCCCGGATTCG +
Preference number: 4 (lower is better)
Translates to: AAFGSEMSYNVKAQPPAVVRLRL*NKLPDS
Trigger: CGAATCCGGGAGCTTGTTCCAGAGTCTCAGGCGTAC...GACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAATGTTTTTGATGGCCTCCTaGATCTCCATCCGCTTGCGA +
Preference number: 4 (lower is better)
Translates to: CVRGFLMASWISIRLRAMFLMAS*ISIRLR
Trigger: TCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAA...CATTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR CCA 90 bp GCTGGGACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGTGTCAGAAGCCATCTGTCTCCTaGGTGGTGGGCATCCGGTGC +
Preference number: 4 (lower is better)
Translates to: AGTERIGNVDPKLSLLCQKPSVS*VVGIRC
Trigger: GCACCGGATGCCCACCACCCAGGAGACAGATGGCTT...CTGACACAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR CCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCACCCTGCCAGCTTCATaGGAATCTCGGAGAAACGGA +
Preference number: 4 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPATLPAS*ESRRNG
Trigger: TCCGTTTCTCCGAGATTCCCATGAAGCTGGCAGGGT...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp GTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCGATGACAATGGGGTCTaGATGCTGCAGCAACCCTGC +
Preference number: 4 (lower is better)
Translates to: VRKCLTMSKHSLQQSYLGDDNGV*MLQQPC
Trigger: GCAGGGTTGCTGCAGCATCCAGACCCCATTGTCATC...GCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp GCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCGATGACAATGGGGTCTaGATGCTGCAGCAACCCTGC +
Preference number: 4 (lower is better)
Translates to: AAFGSEMSYNVKAQPPAVDDNGV*MLQQPC
Trigger: GCAGGGTTGCTGCAGCATCCAGACCCCATTGTCATC...GACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTCCTGGATGAAGTCCTaGGGGTCGGTGCTAAAACTG +
Preference number: 4 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPASWMKS*GSVLKL
Trigger: CAGTTTTAGCACCGACCCCCAGGACTTCATCCAGGA...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTTCCAGGCTCCAGGGCTaGGAAGAAAGATCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSLWFGNVLQCQSTASSSSRLQG*EERSLS
Trigger: GCTCAGGGATCTTTCTTCCCAGCCCTGGAGCCTGGA...ACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGGACATGCCAGGTCGCTaGTACTGCGCCGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKDMPGR*YCAAGP
Trigger: GGGCCCCGCGGCGCAGTACCAGCGACCTGGCATGTC...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CGCCTTGCTGGGACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGGTACGCCTGAGACTCTaGAACAAGCTCCCGGATCCC +
Preference number: 4 (lower is better)
Translates to: RLAGTERIGNVDPKLSLLVRLRL*NKLPDP
Trigger: GGGATCCGGGAGCTTGTTCCAGAGTCTCAGGCGTAC...CAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGTCCCAGCAAGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR TCA 90 bp CTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGGGCTTGCCACTCCACCAGGTaGTTGTCAGGCCCGTACAGC +
Preference number: 4 (lower is better)
Translates to: LVGMAKNFGLERLGRVWACHSTR*LSGPYS
Trigger: GCTGTACGGGCCTGACAATCACCTGGTGGAGTGGCA...AGCCCAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGAGTAACGGTTGCAGTTaGTGTACTCCCGCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWSNGCS*CTPARA
Trigger: GGCACGAGCGGGAGTACATCAACTGCAACCGTTACT...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp CAAACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCAGTAACGGTTGCAGTTaGTGTACTCCCGCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: QTQQPLVRKCLTMSKHSLSNGCS*CTPARA
Trigger: GGCACGAGCGGGAGTACATCAACTGCAACCGTTACT...GAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp GCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCGGGAAGAAAGATCCCTaGGCAGTTAGGTCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: AAFGSEMSYNVKAQPPAVGKKDP*AVRSGE
Trigger: TTCGCCTGACCTAACTGCTCAGGGATCTTTCTTCCC...GACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp CAAACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCGGATCTCCATCCGCTTaGGAGCAATGGTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: QTQQPLVRKCLTMSKHSLGSPSA*EQWSGP
Trigger: TGGACCAGACCATTGCTCGCAAGCGGATGGAGATCC...GAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp ACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGTGTCAGAGGCTTTCCCCCAGGGGTCCCTaGAGTTCCTGCACTATCGCC +
Preference number: 4 (lower is better)
Translates to: TERIGNVDPKLSLLCQRLSPRGP*SSCTIA
Trigger: GGCGATAGTGCAGGAACTGCAGGGACCCCTGGGGGA...AAGCCTCTGACACAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR GCA 90 bp GTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCAGTTCCTGCCTTCGCTaGTGCACCTTGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: VRKCLTMSKHSLQQSYLGSSCLR*CTLAKM
Trigger: CATCTTTGCCAAGGTGCAGCAGCGAAGGCAGGAACT...GCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp CTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGGGCTGGTTCCCTGGTGACATaGCAGGTCGCTGGTACTGCG +
Preference number: 4 (lower is better)
Translates to: LVGMAKNFGLERLGRVWAGSLVT*QVAGTA
Trigger: CGCAGTACCAGCGACCTGGCATGTCACCAGGGAACC...AGCCCAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp GCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCATGGATCCATCATGGTaGGTGGCATGCCAGGTCGAA +
Preference number: 4 (lower is better)
Translates to: AAFGSEMSYNVKAQPPAVMDPSW*VACQVE
Trigger: TTCGACCTGGCATGCCACCCACCATGATGGATCCAT...GACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp GTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCATGGATCCATCATGGTaGGTGGCATGCCAGGTCGAA +
Preference number: 4 (lower is better)
Translates to: VRKCLTMSKHSLQQSYLGMDPSW*VACQVE
Trigger: TTCGACCTGGCATGCCACCCACCATGATGGATCCAT...GCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AGTTCCTGCACTATCGCCTTCCGCCTTGCTGGGACTGAACGTATTGGAAATGTAATGGATCCATCATGGTaGGTGGCATGCCAGGTCGAA +
Preference number: 4 (lower is better)
Translates to: SSCTIAFRLAGTERIGNVMDPSW*VACQVE
Trigger: TTCGACCTGGCATGCCACCCACCATGATGGATCCAT...TACATTTCCAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGCAGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR CCA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGGAATGGATCCATCATaGTGGGTGGCATGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWGMDPS*WVACQV
Trigger: GACCTGGCATGCCACCCACCATGATGGATCCATTCC...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TCCTGCACTATCGCCTTCCGCCTTGCTGGGACTGAACGTATTGGAAATGTAGATACCCTGCCAGCTTCATaGGAATCTCGGAGAAACGGA +
Preference number: 4 (lower is better)
Translates to: SCTIAFRLAGTERIGNVDTLPAS*ESRRNG
Trigger: TCCGTTTCTCCGAGATTCCCATGAAGCTGGCAGGGT...ATCTACATTTCCAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR CCA 90 bp AACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGATGACAATGGGGTCTaGATGCTGCAGCAACCCTGC +
Preference number: 4 (lower is better)
Translates to: NPAAFGSEMSYNVKAQPPDDNGV*MLQQPC
Trigger: GCAGGGTTGCTGCAGCATCCAGACCCCATTGTCATC...TGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCATTTGGGCCTTCAGTaGGTCGTCCACCTCCACATC +
Preference number: 4 (lower is better)
Translates to: SSLWFGNVLQCQSTASSSHLGLQ*VVHLHI
Trigger: GATGTGGAGGTGGACGACCCACTGAAGGCCCAAATG...ACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CAAACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCATTTGGGCCTTCAGTaGGTCGTCCACCTCCACATC +
Preference number: 4 (lower is better)
Translates to: QTQQPLVRKCLTMSKHSLHLGLQ*VVHLHI
Trigger: GATGTGGAGGTGGACGACCCACTGAAGGCCCAAATG...GAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGGACTCAATGGTCTCATaGATCTTGACATCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRDSMVS*ILTSRE
Trigger: CTCCCTTGATGTCAAGATCCATGAGACCATTGAGTC...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp GCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCTCCTGGATGAAGTCCTaGGGGTCGGTGCTAAAACTG +
Preference number: 4 (lower is better)
Translates to: AAFGSEMSYNVKAQPPAVSWMKS*GSVLKL
Trigger: CAGTTTTAGCACCGACCCCCAGGACTTCATCCAGGA...GACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAAGGCTAGGAAGAGTCTaGGCTGCACCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: NPAAFGSEMSYNVKAQPPRLGRV*AAPPLP
Trigger: AGGAAGAGGAGGTGCAGCCCAGACTCTTCCTAGCCT...TGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp AACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGTGTCAGAGGCTTTTTaGTGGCCTCCTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: NPAAFGSEMSYNVKAQPPVSEAF*WPPGSP
Trigger: TGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACAC...TGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp CAAACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCGGGAAGAAAGATCCCTaGGCAGTTAGGTCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: QTQQPLVRKCLTMSKHSLGKKDP*AVRSGE
Trigger: TTCGCCTGACCTAACTGCTCAGGGATCTTTCTTCCC...GAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp AAGTGGCTCCCACATAGAAAACTTGCTCCCAAAATAGTGCAAATACCCAAAGGACATCCGGTTCCCTGGTaGCATGCCAGGTCGCTGGTA +
Preference number: 4 (lower is better)
Translates to: KWLPHRKLAPKIVQIPKGHPVPW*HARSLV
Trigger: TACCAGCGACCTGGCATGTCACCAGGGAACCGGATG...TCCTTTGGGTATTTGCACTATTTTGGGAGCAAGTTTTCTATGTGGGAGCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp AAGTGGCTCCCACATAGAAAACTTGCTCCCAAAATAGTGCAAATACCCAAAGGATCGAAGCGGAGCTGCTaGACCAAATGGGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: KWLPHRKLAPKIVQIPKGSKRSC*TKWGAS
Trigger: GCTGGCTCCCCATTTGGTGCAGCAGCTCCGCTTCGA...TCCTTTGGGTATTTGCACTATTTTGGGAGCAAGTTTTCTATGTGGGAGCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp ACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGTGTCAGAGGCTTAGGTCGAAGCGGAGCTaGTGCACCAAATGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: TERIGNVDPKLSLLCQRLRSKRS*CTKWGA
Trigger: GGCTCCCCATTTGGTGCAGCAGCTCCGCTTCGACCT...AAGCCTCTGACACAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR GCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGATGGCGGCCCTCGTCTaGGTGTGCACTCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKMAALV*VCTPSS
Trigger: GCTGCTGGGAGTGCACACGCAGACGAGGGCCGCCAT...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp TGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGCGCTCGTGCCCATCCTaGAGCTGGTTGTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: WACRNGKELWFRKARKSLRSCPS*SWLCLM
Trigger: CATCAAGCACAACCAGCTGCAGGATGGGCACGAGCG...CAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp CAAACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCACCTTGGCAAAGATGTaGCTGCCTACTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QTQQPLVRKCLTMSKHSLTLAKM*LPTASW
Trigger: CCAGGAAGCAGTAGGCAGGCACATCTTTGCCAAGGT...GAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp CAGCAGCAAGGCTGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGTTCCTGCCTTCGCTaGTGCACCTTGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: QQQGWACRNGKELWFRKASSCLR*CTLAKM
Trigger: CATCTTTGCCAAGGTGCAGCAGCGAAGGCAGGAACT...AGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCAGCCTTGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGGGCTATCCATCATGGTGGGTaGCATGCCAGGTCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: LVGMAKNFGLERLGRVWAIHHGG*HARSKR
Trigger: CCGCTTCGACCTGGCATGCCACCCACCATGATGGAT...AGCCCAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AAGTGGCTCCCACATAGAAAACTTGCTCCCAAAATAGTGCAAATACCCAAAGGAATGGGAGGCTGCGCCTaGGGCACAAGCAGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: KWLPHRKLAPKIVQIPKGMGGCA*GTSRRF
Trigger: AAAACGCCTGCTTGTGCCCCAGGCGCAGCCTCCCAT...TCCTTTGGGTATTTGCACTATTTTGGGAGCAAGTTTTCTATGTGGGAGCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AGTTCCTGCACTATCGCCTTCCGCCTTGCTGGGACTGAACGTATTGGAAATGTATTGCGAGCAATGGTCTaGTCCAGCTTCCGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: SSCTIAFRLAGTERIGNVLRAMV*SSFRSK
Trigger: TTTTGAGCGGAAGCTGGACCAGACCATTGCTCGCAA...TACATTTCCAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGCAGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR CCA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGACCCTGCCAGCTTCATaGGAATCTCGGAGAAACGGA +
Preference number: 4 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWTLPAS*ESRRNG
Trigger: TCCGTTTCTCCGAGATTCCCATGAAGCTGGCAGGGT...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCAGAAAATTGCTCATTTaGGCCTTCAGTGGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPARKLLI*AFSGSS
Trigger: GGACGACCCACTGAAGGCCCAAATGAGCAATTTTCT...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp TGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGGAACGGAGCCATTCCTaGATGAAGTCCTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: WACRNGKELWFRKARKSLERSHS*MKSWGS
Trigger: CGACCCCCAGGACTTCATCCAGGAATGGCTCCGTTC...CAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp GCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCAACCAGCAGCAAGGCTaGGCTTGTAGGAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: AAFGSEMSYNVKAQPPAVNQQQG*ACRNGK
Trigger: TTTGCCATTCCTACAAGCCCAGCCTTGCTGCTGGTT...GACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp GTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCGCCGCTTGCATAGATTaGGGAAAGAAAAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: VRKCLTMSKHSLQQSYLGAACID*GKKRRR
Trigger: CCTCCTTCTTTTCTTTCCTCAATCTATGCAAGCGGC...GCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGGGTTCCCTGGTGACATaGCAGGTCGTCGAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKGSLVT*QVVEAP
Trigger: AGGGGCCTCGACGACCTGGCATGTCACCAGGGAACC...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225742.13
CDS-3UTR GCA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTAGCCCTCGTCTGCGTGTaGACTCCCAGCAGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: KKYKALGTKQQGILSLHLALVCV*TPSSLA
Trigger: GGCAAGGCTGCTGGGAGTGCACACGCAGACGAGGGC...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp CTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGACTAAAGCTGATGTGCCTGCCTACTaGTTCCTGGGCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LWGPSNKESYHYIYKTKADVPAY*FLGPGL
Trigger: CAGCCCTGGGCCCAGGAAGCAGTAGGCAGGCACATC...AGCTTTAGTCTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGGATGTGCCTGCCTACTaGTTCCTGGGCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKDVPAY*FLGPGL
Trigger: CAGCCCTGGGCCCAGGAAGCAGTAGGCAGGCACATC...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp AACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGGAAATTTCCAAACCTaGCAGATGTGGCACTCGCCA +
Preference number: 4 (lower is better)
Translates to: NPAAFGSEMSYNVKAQPPGNFQT*QMWHSP
Trigger: TGGCGAGTGCCACATCTGGCAGGTTTGGAAATTTCC...TGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATTTAACCCCCGGCGCTaGGCAGGCATGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KKYKALGTKQQGILSLHLFNPRR*AGMGGC
Trigger: GCAGCCTCCCATGCCTGCCCAGCGCCGGGGGTTAAA...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CAGCAGCAAGGCTGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTTTTTTGATGGCCTCCTaGATCTCCATCCGCTTGCGA +
Preference number: 4 (lower is better)
Translates to: QQQGWACRNGKELWFRKAFLMAS*ISIRLR
Trigger: TCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAA...AGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCAGCCTTGCTGCTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGCTGTCTCCTGGGTGGTaGGCATCCGGTGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKLSPGW*ASGATP
Trigger: TGGAGTGGCACCGGATGCCCACCACCCAGGAGACAG...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp AAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTAGAAAATTGCTCATTTaGGCCTTCAGTGGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: KCLTMSKHSLQQSYLGLPRKLLI*AFSGSS
Trigger: GGACGACCCACTGAAGGCCCAAATGAGCAATTTTCT...AGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp AAGTGGCTCCCACATAGAAAACTTGCTCCCAAAATAGTGCAAATACCCAAAGGAGAACGGAGCCATTCCTaGATGAAGTCCTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: KWLPHRKLAPKIVQIPKGERSHS*MKSWGS
Trigger: CGACCCCCAGGACTTCATCCAGGAATGGCTCCGTTC...TCCTTTGGGTATTTGCACTATTTTGGGAGCAAGTTTTCTATGTGGGAGCCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGACTAAAGCTCAAGGACCCAGAGGGTaGTCTCCCTCCAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LWGPSNKESYHYIYKTKAQGPRG*SPSRLQ
Trigger: CTGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTG...AGCTTTAGTCTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp AGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTAACCAGCAGCAAGGCTaGGCTTGTAGGAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: SSLWFGNVLQCQSTASSSNQQQG*ACRNGK
Trigger: TTTGCCATTCCTACAAGCCCAGCCTTGCTGCTGGTT...ACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGACTAAAGCTGCCATGCTAGAGAACTaGAGTGTCCCCTCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: LWGPSNKESYHYIYKTKAAMLEN*SVPSPA
Trigger: GGCCGGGGAGGGGACACTCCAGTTCTCTAGCATGGC...AGCTTTAGTCTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp TGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGGTGTCAGAGGCTTTTTaGTGGCCTCCTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: WACRNGKELWFRKARKSLVSEAF*WPPGSP
Trigger: TGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACAC...CAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp CTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGACTAAAGCTTGCCACTCCACCAGGTaGTTGTCAGGCCCGTACAGC +
Preference number: 4 (lower is better)
Translates to: LWGPSNKESYHYIYKTKACHSTR*LSGPYS
Trigger: GCTGTACGGGCCTGACAATCACCTGGTGGAGTGGCA...AGCTTTAGTCTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp CTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGGGCTGGGAAGAAAGATCCCTaGGCAGTTAGGTCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: LVGMAKNFGLERLGRVWAGKKDP*AVRSGE
Trigger: TTCGCCTGACCTAACTGCTCAGGGATCTTTCTTCCC...AGCCCAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGAGAGGAGGCATCTGCTaGACCCAATTAAAGCCAATG +
Preference number: 4 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWRGGIC*TQLKPM
Trigger: CATTGGCTTTAATTGGGTTCAGCAGATGCCTCCTCT...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp CTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGGGCTACCTTGGCAAAGATGTaGCTGCCTACTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LVGMAKNFGLERLGRVWATLAKM*LPTASW
Trigger: CCAGGAAGCAGTAGGCAGGCACATCTTTGCCAAGGT...AGCCCAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGCCCATGGCTGCTGCCTaGAAGGCCTGTTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKPMAAA*KACLAA
Trigger: AGCTGCCAAACAGGCCTTGCAGGCAGCAGCCATGGG...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323347.14
CDS-3UTR CCA 90 bp GGGACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGTGTCAGAGGTTGCGAGCAATGGTCTaGTCCAGCTTCCGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: GTERIGNVDPKLSLLCQRLRAMV*SSFRSK
Trigger: TTTTGAGCGGAAGCTGGACCAGACCATTGCTCGCAA...CCTCTGACACAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR CCA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTACAAGGACCCAGAGGGTaGTCTCCCTCCAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KKYKALGTKQQGILSLHLQGPRG*SPSRLQ
Trigger: CTGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTG...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp TGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGCCATTCACCTTACCCTaGCCTCCACATGCACATACC +
Preference number: 4 (lower is better)
Translates to: WACRNGKELWFRKARKSLPFTLP*PPHAHT
Trigger: GGTATGTGCATGTGGAGGCCAGGGTAAGGTGAATGG...CAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp ACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGTGTCAGAGGCTTAGATCCATGTACGCCTaGGACTCTGGAACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: TERIGNVDPKLSLLCQRLRSMYA*DSGTSS
Trigger: GGAGCTTGTTCCAGAGTCTCAGGCGTACATGGATCT...AAGCCTCTGACACAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR TCA 90 bp AAGTGGCTCCCACATAGAAAACTTGCTCCCAAAATAGTGCAAATACCCAAAGGAAGATCCATGTACGCCTaGGACTCTGGAACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: KWLPHRKLAPKIVQIPKGRSMYA*DSGTSS
Trigger: GGAGCTTGTTCCAGAGTCTCAGGCGTACATGGATCT...TCCTTTGGGTATTTGCACTATTTTGGGAGCAAGTTTTCTATGTGGGAGCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp ACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGTGTCAGAGGCTTGTGTCAGAGGCTTTTTaGTGGCCTCCTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: TERIGNVDPKLSLLCQRLVSEAF*WPPGSP
Trigger: TGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACAC...AAGCCTCTGACACAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR TCA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATGCCACTCCACCAGGTaGTTGTCAGGCCCGTACAGC +
Preference number: 4 (lower is better)
Translates to: KKYKALGTKQQGILSLHLCHSTR*LSGPYS
Trigger: GCTGTACGGGCCTGACAATCACCTGGTGGAGTGGCA...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGGAGGCGATCTCCTGCTaGTTGGTGGTAGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKEAISC*LVVEAR
Trigger: TCTGGCCTCTACCACCAATCAGCAGGAGATCGCCTC...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp CTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGACTAAAGCTGAGGCGATCTCCTGCTaGTTGGTGGTAGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LWGPSNKESYHYIYKTKAEAISC*LVVEAR
Trigger: TCTGGCCTCTACCACCAATCAGCAGGAGATCGCCTC...AGCTTTAGTCTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp CGCCTTGCTGGGACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGTTAACACTTACTCGCTaGGGTAGAACCTTATCTGCC +
Preference number: 4 (lower is better)
Translates to: RLAGTERIGNVDPKLSLLLTLTR*GRTLSA
Trigger: GGCAGATAAGGTTCTACCTCAGCGAGTAAGTGTTAA...CAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGTCCCAGCAAGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR GCA 90 bp CTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGACTAAAGCTGGTCCCTGCAGTTCCTaGACTATCGCCTTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: LWGPSNKESYHYIYKTKAGPCSS*TIAFRL
Trigger: AAGGCGGAAGGCGATAGTGCAGGAACTGCAGGGACC...AGCTTTAGTCTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR GCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGATGGGGTCTGGATGCTaGAGCAACCCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKMGSGC*SNPASF
Trigger: GAAGCTGGCAGGGTTGCTGCAGCATCCAGACCCCAT...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGTGGCAAAGATGTGCCTaGCTACTGCTTCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKWQRCA*LLLPGP
Trigger: GGGCCCAGGAAGCAGTAGGCAGGCACATCTTTGCCA...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGATCCATCATGGTGGGTaGCATGCCAGGTCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKIHHGG*HARSKR
Trigger: CCGCTTCGACCTGGCATGCCACCCACCATGATGGAT...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp ACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGTGTCAGAGGCTTCAGGCGTTTTCGGAATaGATCCATCATGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TERIGNVDPKLSLLCQRLQAFSE*IHHGGW
Trigger: CCACCCACCATGATGGATCCATTCCGAAAACGCCTG...AAGCCTCTGACACAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580054.1
CDS-3UTR CCA 90 bp CTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGACTAAAGCTTCCGCTTGCGAGCAATaGTCTGGTCCAGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: LWGPSNKESYHYIYKTKASACEQ*SGPASA
Trigger: AGCGGAAGCTGGACCAGACCATTGCTCGCAAGCGGA...AGCTTTAGTCTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGGGCTTTTTTGATGGCCTCCTaGATCTCCATCCGCTTGCGA +
Preference number: 4 (lower is better)
Translates to: LVGMAKNFGLERLGRVWAFLMAS*ISIRLR
Trigger: TCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAA...AGCCCAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGGGCTCAGGCTGTCTTCTTCTaGTCGTTAGGGTCGACACTA +
Preference number: 4 (lower is better)
Translates to: LVGMAKNFGLERLGRVWAQAVFF*SLGSTL
Trigger: TAGTGTCGACCCTAACGACCAGAAGAAGACAGCCTG...AGCCCAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CAAACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCGACTCAATGGTCTCATaGATCTTGACATCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: QTQQPLVRKCLTMSKHSLDSMVS*ILTSRE
Trigger: CTCCCTTGATGTCAAGATCCATGAGACCATTGAGTC...GAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp GTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCAAACCCAGCAGCCTTTaGTTCGGAAATGTCTTACAA +
Preference number: 4 (lower is better)
Translates to: VRKCLTMSKHSLQQSYLGKPSSL*FGNVLQ
Trigger: TTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTT...GCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGACTAAAGCTCAAACCTGCCAGATGTaGCACTCGCCAAGCCCTAGG +
Preference number: 4 (lower is better)
Translates to: LWGPSNKESYHYIYKTKAQTCQM*HSPSPR
Trigger: CCTAGGGCTTGGCGAGTGCCACATCTGGCAGGTTTG...AGCTTTAGTCTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp CTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGACTAAAGCTAGTAACGGTTGCAGTTaGTGTACTCCCGCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: LWGPSNKESYHYIYKTKASNGCS*CTPARA
Trigger: GGCACGAGCGGGAGTACATCAACTGCAACCGTTACT...AGCTTTAGTCTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGGGAGTCGGCCACAACTaGAGATCTGGCGGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKGVGHN*RSGGSN
Trigger: GTTACTTCCGCCAGATCTTCAGTTGTGGCCGACTCC...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTAGAGGCGATCTCCTGCTaGTTGGTGGTAGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: KKYKALGTKQQGILSLHLEAISC*LVVEAR
Trigger: TCTGGCCTCTACCACCAATCAGCAGGAGATCGCCTC...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGCACTCCCAGCAGCCTTaGCAATCGGGGGTCCAATTT +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKHSQQP*QSGVQF
Trigger: AAATTGGACCCCCGATTGGCAAGGCTGCTGGGAGTG...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTAATGGGGTCTGGATGCTaGAGCAACCCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KKYKALGTKQQGILSLHLMGSGC*SNPASF
Trigger: GAAGCTGGCAGGGTTGCTGCAGCATCCAGACCCCAT...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp AAGTGGCTCCCACATAGAAAACTTGCTCCCAAAATAGTGCAAATACCCAAAGGAGGAAATTTCCAAACCTaGCAGATGTGGCACTCGCCA +
Preference number: 4 (lower is better)
Translates to: KWLPHRKLAPKIVQIPKGGNFQT*QMWHSP
Trigger: TGGCGAGTGCCACATCTGGCAGGTTTGGAAATTTCC...TCCTTTGGGTATTTGCACTATTTTGGGAGCAAGTTTTCTATGTGGGAGCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGGGAATGGATCCATCATaGTGGGTGGCATGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKGMDPS*WVACQV
Trigger: GACCTGGCATGCCACCCACCATGATGGATCCATTCC...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AAGTGGCTCCCACATAGAAAACTTGCTCCCAAAATAGTGCAAATACCCAAAGGATTGCGAGCAATGGTCTaGTCCAGCTTCCGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: KWLPHRKLAPKIVQIPKGLRAMV*SSFRSK
Trigger: TTTTGAGCGGAAGCTGGACCAGACCATTGCTCGCAA...TCCTTTGGGTATTTGCACTATTTTGGGAGCAAGTTTTCTATGTGGGAGCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTAAACCCAGCAGCCTTTaGTTCGGAAATGTCTTACAA +
Preference number: 4 (lower is better)
Translates to: SSLWFGNVLQCQSTASSSKPSSL*FGNVLQ
Trigger: TTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTT...ACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp CTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGACTAAAGCTAGATCCATGTACGCCTaGGACTCTGGAACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LWGPSNKESYHYIYKTKARSMYA*DSGTSS
Trigger: GGAGCTTGTTCCAGAGTCTCAGGCGTACATGGATCT...AGCTTTAGTCTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGGGGAAGAAAGATCCCTaGGCAGTTAGGTCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKGKKDP*AVRSGE
Trigger: TTCGCCTGACCTAACTGCTCAGGGATCTTTCTTCCC...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp CTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGACTAAAGCTGGGAAGAAAGATCCCTaGGCAGTTAGGTCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: LWGPSNKESYHYIYKTKAGKKDP*AVRSGE
Trigger: TTCGCCTGACCTAACTGCTCAGGGATCTTTCTTCCC...AGCTTTAGTCTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTACACTCCCAGCAGCCTTaGCAATCGGGGGTCCAATTT +
Preference number: 4 (lower is better)
Translates to: KKYKALGTKQQGILSLHLHSQQP*QSGVQF
Trigger: AAATTGGACCCCCGATTGGCAAGGCTGCTGGGAGTG...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGCAGGCGTTTTCGGAATaGATCCATCATGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKQAFSE*IHHGGW
Trigger: CCACCCACCATGATGGATCCATTCCGAAAACGCCTG...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTACATTTGGGCCTTCAGTaGGTCGTCCACCTCCACATC +
Preference number: 4 (lower is better)
Translates to: KKYKALGTKQQGILSLHLHLGLQ*VVHLHI
Trigger: GATGTGGAGGTGGACGACCCACTGAAGGCCCAAATG...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGAAAAGTATAAGGCTTTaGGGACCAAGCAACAAGGAA +
Preference number: 4 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWKSIRL*GPSNKE
Trigger: TTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTT...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR GCA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTAAGTTCCTGCCTTCGCTaGTGCACCTTGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: KKYKALGTKQQGILSLHLSSCLR*CTLAKM
Trigger: CATCTTTGCCAAGGTGCAGCAGCGAAGGCAGGAACT...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTACAGGCGTTTTCGGAATaGATCCATCATGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KKYKALGTKQQGILSLHLQAFSE*IHHGGW
Trigger: CCACCCACCATGATGGATCCATTCCGAAAACGCCTG...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGTTTTTGATGGCCTCCTaGATCTCCATCCGCTTGCGA +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKFLMAS*ISIRLR
Trigger: TCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAA...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATCCTGGATGAAGTCCTaGGGGTCGGTGCTAAAACTG +
Preference number: 4 (lower is better)
Translates to: KKYKALGTKQQGILSLHLSWMKS*GSVLKL
Trigger: CAGTTTTAGCACCGACCCCCAGGACTTCATCCAGGA...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTAATGGCAAAGAACTTTaGTTTAGAAAGGCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSLWFGNVLQCQSTASSSNGKEL*FRKARK
Trigger: CTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATT...ACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGAATGGCAAAGAACTTTaGTTTAGAAAGGCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWNGKEL*FRKARK
Trigger: CTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATT...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR TCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGAGAGGAGGCATCTGCTaGACCCAATTAAAGCCAATG +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKRGGIC*TQLKPM
Trigger: CATTGGCTTTAATTGGGTTCAGCAGATGCCTCCTCT...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGGCCGCTTGCATAGATTaGGGAAAGAAAAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKAACID*GKKRRR
Trigger: CCTCCTTCTTTTCTTTCCTCAATCTATGCAAGCGGC...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGAGAAAATTGCTCATTTaGGCCTTCAGTGGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKRKLLI*AFSGSS
Trigger: GGACGACCCACTGAAGGCCCAAATGAGCAATTTTCT...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR TCA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTAAGAGGAGGCATCTGCTaGACCCAATTAAAGCCAATG +
Preference number: 4 (lower is better)
Translates to: KKYKALGTKQQGILSLHLRGGIC*TQLKPM
Trigger: CATTGGCTTTAATTGGGTTCAGCAGATGCCTCCTCT...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTAAGAAAATTGCTCATTTaGGCCTTCAGTGGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: KKYKALGTKQQGILSLHLRKLLI*AFSGSS
Trigger: GGACGACCCACTGAAGGCCCAAATGAGCAATTTTCT...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CCA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTAGACTCAATGGTCTCATaGATCTTGACATCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KKYKALGTKQQGILSLHLDSMVS*ILTSRE
Trigger: CTCCCTTGATGTCAAGATCCATGAGACCATTGAGTC...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGAAACCCAGCAGCCTTTaGTTCGGAAATGTCTTACAA +
Preference number: 4 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKKPSSL*FGNVLQ
Trigger: TTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTT...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CCA 90 bp CTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGACTAAAGCTAAAAGTATAAGGCTTTaGGGACCAAGCAACAAGGAA +
Preference number: 4 (lower is better)
Translates to: LWGPSNKESYHYIYKTKAKSIRL*GPSNKE
Trigger: TTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTT...AGCTTTAGTCTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS GCA 90 bp AGCGGAGCTGCTGCACCAAATGGGGAGCCAGCAGGGGGTCCCACCTaGAAGCCAGCCATGGGCATCCGGTTCCCTGGTGACATGCCAGGT +
Preference number: 5 (lower is better)
Translates to: SGAAAPNGEPAGGPT*KPAMGIRFPGDMPG
Trigger: ACCTGGCATGTCACCAGGGAACCGGATGCCCATGGCTGGCTTGCAGGTGGGACCCCCTGCTGGCTCCCCATTTGGTGCAGCAGCTCCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000580054.1
ENST00000613943.4
CDS-3UTR CAA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCCCGTACAGCTCCTaGTCCAGCTCAATGACGAGG +
Preference number: 5 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPGPYSS*SSSMTR
Trigger: CCTCGTCATTGAGCTGGACAAGGAGCTGTACGGGCC...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCGGCCCGTACAGCTCCTaGTCCAGCTCAATGACGAGG +
Preference number: 5 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLGPYSS*SSSMTR
Trigger: CCTCGTCATTGAGCTGGACAAGGAGCTGTACGGGCC...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGCCTGCAAGGCCTGTTaGGCAGCTCTGCCTTGCACA +
Preference number: 5 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPACKAC*AALPCT
Trigger: TGTGCAAGGCAGAGCTGCCAAACAGGCCTTGCAGGC...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323347.14
CDS GCA 90 bp TGGATCCATCATGGTGGGTGGCATGCCAGGTCGAAGCGGAGCTGCTaGACCAAATGGGGAGCCAGCAGGGGGTCCCACCTGCAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: WIHHGGWHARSKRSC*TKWGASRGSHLQAS
Trigger: GCTGGCTTGCAGGTGGGACCCCCTGCTGGCTCCCCATTTGGTGCAGCAGCTCCGCTTCGACCTGGCATGCCACCCACCATGATGGATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000580054.1
ENST00000613943.4
CDS-3UTR CAA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCATGGATCTCCATCCGCTaGCGAGCAATGGTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPWISIR*RAMVWS
Trigger: GGACCAGACCATTGCTCGCAAGCGGATGGAGATCCA...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCAGCACTCCCAGCAGCCTaGCCAATCGGGGGTCCAATT +
Preference number: 5 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPALPAA*PIGGPI
Trigger: AATTGGACCCCCGATTGGCAAGGCTGCTGGGAGTGC...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CAA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCAGGTCGCTGAGGCCTaGCTCCCTGACATTTCTGTG +
Preference number: 5 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLQVAEA*LPDISV
Trigger: CACAGAAATGTCAGGGAGCAAGGCCTCAGCGACCTG...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323347.14
CDS GCA 90 bp GAATGGATCCATCATGGTGGGTGGCATGCCAGGTCGAAGCGGAGCTaGTGCACCAAATGGGGAGCCAGCAGGGGGTCCCACCTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: EWIHHGGWHARSKRS*CTKWGASRGSHLQA
Trigger: GGCTTGCAGGTGGGACCCCCTGCTGGCTCCCCATTTGGTGCAGCAGCTCCGCTTCGACCTGGCATGCCACCCACCATGATGGATCCATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000580054.1
ENST00000613943.4
CDS CCA 90 bp AGGCATGGGAGGCTGCGCCTGGGGCACAAGCAGGCGTTTTCGGAATaGATCCATCATGGTGGGTGGCATGCCAGGTCGAAGCGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: RHGRLRLGHKQAFSE*IHHGGWHARSKRSC
Trigger: GCAGCTCCGCTTCGACCTGGCATGCCACCCACCATGATGGATCCATTCCGAAAACGCCTGCTTGTGCCCCAGGCGCAGCCTCCCATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000580054.1
ENST00000613943.4
CDS CCA 90 bp CTCCTCTTTAACCCCCGGCGCTGGGCAGGCATGGGAGGCTGCGCCTaGGGCACAAGCAGGCGTTTTCGGAATGGATCCATCATGGTGGGT +
Preference number: 5 (lower is better)
Translates to: LLFNPRRWAGMGGCA*GTSRRFRNGSIMVG
Trigger: ACCCACCATGATGGATCCATTCCGAAAACGCCTGCTTGTGCCCCAGGCGCAGCCTCCCATGCCTGCCCAGCGCCGGGGGTTAAAGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000580054.1
ENST00000613943.4
CDS-3UTR CAA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCAGGGTGCACTTGACGTaGAGGTCTCCAGGCCGTTTT +
Preference number: 5 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLRVHLT*RSPGRF
Trigger: AAAACGGCCTGGAGACCTCAACGTCAAGTGCACCCT...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS CCA 90 bp GCGCCTGGGGCACAAGCAGGCGTTTTCGGAATGGATCCATCATGGTaGGTGGCATGCCAGGTCGAAGCGGAGCTGCTGCACCAAATGGGG +
Preference number: 5 (lower is better)
Translates to: APGAQAGVFGMDPSW*VACQVEAELLHQMG
Trigger: CCCCATTTGGTGCAGCAGCTCCGCTTCGACCTGGCATGCCACCCACCATGATGGATCCATTCCGAAAACGCCTGCTTGTGCCCCAGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000580054.1
ENST00000613943.4
CDS-3UTR CAA 90 bp CAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGTGTGTCAGAGGCTTTTaGATGGCCTCCTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: QPTCLRPQQGPRGWSPSRCVRGF*MASWIS
Trigger: GGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACA...CCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp CAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGACATCAGTGATGATCTaGAGGTCTCGGCGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: QPTCLRPQQGPRGWSPSRTSVMI*RSRRWE
Trigger: TTCCCAGCGCCGAGACCTCAAGATCATCACTGATGT...CCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCACATCAGTGATGATCTaGAGGTCTCGGCGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLTSVMI*RSRRWE
Trigger: TTCCCAGCGCCGAGACCTCAAGATCATCACTGATGT...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS GCA 90 bp AAGCAGGACTCTGGGCAGACTGGAGGCAGGGAAATGGTGCCCTCTTaGAGCCCACGAGGGACTTCCTCGAGACACTCGACTGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: KQDSGQTGGREMVPS*SPRGTSSRHSTAIC
Trigger: GCAGATGGCAGTCGAGTGTCTCGAGGAAGTCCCTCGTGGGCTGCAAGAGGGCACCATTTCCCTGCCTCCAGTCTGCCCAGAGTCCTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581832.1
ENST00000584483.5
CDS CCA 90 bp GCTGCGCCTGGGGCACAAGCAGGCGTTTTCGGAATGGATCCATCATaGTGGGTGGCATGCCAGGTCGAAGCGGAGCTGCTGCACCAAATG +
Preference number: 5 (lower is better)
Translates to: AAPGAQAGVFGMDPS*WVACQVEAELLHQM
Trigger: CATTTGGTGCAGCAGCTCCGCTTCGACCTGGCATGCCACCCACCATGATGGATCCATTCCGAAAACGCCTGCTTGTGCCCCAGGCGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000580054.1
ENST00000613943.4
CDS-3UTR CAA 90 bp CCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCACAGAAAATTGCTCATTaGGGCCTTCAGTGGGTCGTC +
Preference number: 5 (lower is better)
Translates to: PSLRVCGPSKDPEGGLPPQKIAH*GLQWVV
Trigger: GACGACCCACTGAAGGCCCAAATGAGCAATTTTCTG...TGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS GCA 90 bp GCACAAGCAGGCGTTTTCGGAATGGATCCATCATGGTGGGTGGCATaGCAGGTCGAAGCGGAGCTGCTGCACCAAATGGGGAGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: AQAGVFGMDPSWWVA*QVEAELLHQMGSQQ
Trigger: CTGCTGGCTCCCCATTTGGTGCAGCAGCTCCGCTTCGACCTGGCATGCCACCCACCATGATGGATCCATTCCGAAAACGCCTGCTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000580054.1
ENST00000613943.4
CDS-3UTR CAA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGAGCAGGAGGGTGCACTaGACGTTGAGGTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLSRRVH*TLRSPG
Trigger: GCCTGGAGACCTCAACGTCAAGTGCACCCTCCTGCT...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CAA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCAACTTCCTCTTCTGTTaGCTAGGATCATCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLNFLFC*LGSSSS
Trigger: ACTGCTGGATGATCCTAGCAAACAGAAGAGGAAGTT...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp CCCTGCAGTTCCTGCACTATCGCCTTCCGCCTTGCTGGGACTGAACGTATTGGAAGCAGGAGGGTGCACTaGACGTTGAGGTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: PCSSCTIAFRLAGTERIGSRRVH*TLRSPG
Trigger: GCCTGGAGACCTCAACGTCAAGTGCACCCTCCTGCT...TCCAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGCAGGAACTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR CAA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGCTTCGCTGCTGCACCTaGGCAAAGATGTGCCTGCCT +
Preference number: 5 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLLRCCT*AKMCLP
Trigger: AGGCAGGCACATCTTTGCCAAGGTGCAGCAGCGAAG...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CAA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCAGCCGCTTGCATAGATaGAGGAAAGAAAAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLSRLHR*RKEKKE
Trigger: CTCCTTCTTTTCTTTCCTCAATCTATGCAAGCGGCT...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS CCA 90 bp GTGGTCAGGGCCACACATACTGTCAGAGGCTTTTTGATGGCCTCCTaGATCTCCATCCGCTTGCGAGCAATGGTCTGGTCCAGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: VVRATHTVRGFLMAS*ISIRLRAMVWSSFR
Trigger: GCGGAAGCTGGACCAGACCATTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACAGTATGTGTGGCCCTGACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577686.1
CDS-3UTR CAA 90 bp TACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGCTCCAACACTAATGACATGGTaGATGACAATGGGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: YVSAAPARTQRVVSLQAPTLMTW*MTMGSG
Trigger: TCCAGACCCCATTGTCATCAACCATGTCATTAGTGT...TGGAGCCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CAA 90 bp CAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCCCTCCAGGAAAAAGTATAAGGCTTaGGGGACCAAGCAACAAGGA +
Preference number: 5 (lower is better)
Translates to: QPTCLRPQQGPRGWSPSRKKYKA*GTKQQG
Trigger: TCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT...CCTGGAGGGAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CAA 90 bp CCTCACCCCAGCCTACGTGTCTGCGGCCCCAGCAAGGACCCAGAGGGTGGTCTCAAAAAGTATAAGGCTTaGGGGACCAAGCAACAAGGA +
Preference number: 5 (lower is better)
Translates to: PHPSLRVCGPSKDPEGGLKKYKA*GTKQQG
Trigger: TCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT...GAGACCACCCTCTGGGTCCTTGCTGGGGCCGCAGACACGTAGGCTGGGGTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS TCA 90 bp TCCCAAGAAAGAGAAGCCCCATTTCAGCCCTGGAGCTCCGGATACTaGAGATTCCTGGGCCCTGAAGGATGGAAGCAGGACTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: SQEREAPFQPWSSGY*RFLGPEGWKQDSGQ
Trigger: CTGCCCAGAGTCCTGCTTCCATCCTTCAGGGCCCAGGAATCTTCAGTATCCGGAGCTCCAGGGCTGAAATGGGGCTTCTCTTTCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581832.1
ENST00000584483.5
CDS-3UTR CAA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGTGGATCTCCATCCGCTaGCGAGCAATGGTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRWISIR*RAMVWS
Trigger: GGACCAGACCATTGCTCGCAAGCGGATGGAGATCCA...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGTGTGTCAGAGGCTTTTaGATGGCCTCCTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLCVRGF*MASWIS
Trigger: GGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACA...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGCTTCGCTGCTGCACCTaGGCAAAGATGTGCCTGCCT +
Preference number: 5 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRLRCCT*AKMCLP
Trigger: AGGCAGGCACATCTTTGCCAAGGTGCAGCAGCGAAG...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS CCA 90 bp TTGAGGTCTCGGCGCTGGGAACGGAGCCATTCCTGGATGAAGTCCTaGGGGTCGGTGCTAAAACTGAGCATGAAATCTCTCTGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: LRSRRWERSHSWMKS*GSVLKLSMKSLWVF
Trigger: GAAGACCCAGAGAGATTTCATGCTCAGTTTTAGCACCGACCCCCAGGACTTCATCCAGGAATGGCTCCGTTCCCAGCGCCGAGACCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp CTTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCTGGATCTCCATCCGCTaGCGAGCAATGGTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LLCQRLFDGLLDLHPLASWISIR*RAMVWS
Trigger: GGACCAGACCATTGCTCGCAAGCGGATGGAGATCCA...GCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR CAA 90 bp TTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAGGCCCGTACAGCTCCTaGTCCAGCTCAATGACGAGG +
Preference number: 5 (lower is better)
Translates to: FCVRGFLMASWISIRLRAGPYSS*SSSMTR
Trigger: CCTCGTCATTGAGCTGGACAAGGAGCTGTACGGGCC...TGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR CAA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCGCACTCCCAGCAGCCTaGCCAATCGGGGGTCCAATT +
Preference number: 5 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPAALPAA*PIGGPI
Trigger: AATTGGACCCCCGATTGGCAAGGCTGCTGGGAGTGC...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CAA 90 bp CTGACCCTCGCCCCAGGGGGAGTCTGTAAACATGCAAACCCAGCAGCCTTTGGTATGGTCTCATGGATCTaGACATCAAGGGAGGCGATC +
Preference number: 5 (lower is better)
Translates to: LTLAPGGVCKHANPAAFGMVSWI*TSREAI
Trigger: GATCGCCTCCCTTGATGTCAAGATCCATGAGACCAT...ACCAAAGGCTGCTGGGTTTGCATGTTTACAGACTCCCCCTGGGGCGAGGGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS GCA 90 bp GGTGCCCTCTTGCAGCCCACGAGGGACTTCCTCGAGACACTCGACTaGCATCTGCAGGAACACTGTAATAACCACACAAATCAACCTCCA +
Preference number: 5 (lower is better)
Translates to: GALLQPTRDFLETLD*HLQEHCNNHTNQPP
Trigger: TGGAGGTTGATTTGTGTGGTTATTACAGTGTTCCTGCAGATGGCAGTCGAGTGTCTCGAGGAAGTCCCTCGTGGGCTGCAAGAGGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584483.5
CDS-3UTR CAA 90 bp TGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAATGCTATCGCCTTCCGCCTaGCTGGGACTGAACGTATTG +
Preference number: 5 (lower is better)
Translates to: CVRGFLMASWISIRLRAMLSPSA*LGLNVL
Trigger: CAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAG...CATTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR CAA 90 bp GCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCAGCAGGAGGGTGCACTaGACGTTGAGGTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: AAFGSEMSYNVKAQPPAVSRRVH*TLRSPG
Trigger: GCCTGGAGACCTCAACGTCAAGTGCACCCTCCTGCT...GACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCCTTCGCTGCTGCACCTaGGCAAAGATGTGCCTGCCT +
Preference number: 5 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPALRCCT*AKMCLP
Trigger: AGGCAGGCACATCTTTGCCAAGGTGCAGCAGCGAAG...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS GCA 90 bp TCTTGCAGCCCACGAGGGACTTCCTCGAGACACTCGACTGCCATCTaGAGGAACACTGTAATAACCACACAAATCAACCTCCAACGGGCT +
Preference number: 5 (lower is better)
Translates to: SCSPRGTSSRHSTAI*RNTVITTQINLQRA
Trigger: AGCCCGTTGGAGGTTGATTTGTGTGGTTATTACAGTGTTCCTGCAGATGGCAGTCGAGTGTCTCGAGGAAGTCCCTCGTGGGCTGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584483.5
CDS CCA 90 bp TCAGTGATGATCTTGAGGTCTCGGCGCTGGGAACGGAGCCATTCCTaGATGAAGTCCTGGGGGTCGGTGCTAAAACTGAGCATGAAATCT +
Preference number: 5 (lower is better)
Translates to: SVMILRSRRWERSHS*MKSWGSVLKLSMKS
Trigger: AGATTTCATGCTCAGTTTTAGCACCGACCCCCAGGACTTCATCCAGGAATGGCTCCGTTCCCAGCGCCGAGACCTCAAGATCATCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp TCCTGCACTATCGCCTTCCGCCTTGCTGGGACTGAACGTATTGGAAATGTAGATTGGATCTCCATCCGCTaGCGAGCAATGGTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: SCTIAFRLAGTERIGNVDWISIR*RAMVWS
Trigger: GGACCAGACCATTGCTCGCAAGCGGATGGAGATCCA...ATCTACATTTCCAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR CAA 90 bp CTTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCTGTGTCAGAGGCTTTTaGATGGCCTCCTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: LLCQRLFDGLLDLHPLASCVRGF*MASWIS
Trigger: GGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACA...GCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR CAA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGGCCCGTACAGCTCCTaGTCCAGCTCAATGACGAGG +
Preference number: 5 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWGPYSS*SSSMTR
Trigger: CCTCGTCATTGAGCTGGACAAGGAGCTGTACGGGCC...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGAGCAGGAGGGTGCACTaGACGTTGAGGTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWSRRVH*TLRSPG
Trigger: GCCTGGAGACCTCAACGTCAAGTGCACCCTCCTGCT...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CAA 90 bp AGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTGCACTCCCAGCAGCCTaGCCAATCGGGGGTCCAATT +
Preference number: 5 (lower is better)
Translates to: SSLWFGNVLQCQSTASSSALPAA*PIGGPI
Trigger: AATTGGACCCCCGATTGGCAAGGCTGCTGGGAGTGC...ACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp AACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCACTCCCAGCAGCCTaGCCAATCGGGGGTCCAATT +
Preference number: 5 (lower is better)
Translates to: NPAAFGSEMSYNVKAQPPALPAA*PIGGPI
Trigger: AATTGGACCCCCGATTGGCAAGGCTGCTGGGAGTGC...TGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGATGGTCTCATGGATCTaGACATCAAGGGAGGCGATC +
Preference number: 5 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRMVSWI*TSREAI
Trigger: GATCGCCTCCCTTGATGTCAAGATCCATGAGACCAT...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp GCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTTCGCTGCTGCACCTaGGCAAAGATGTGCCTGCCT +
Preference number: 5 (lower is better)
Translates to: AAFGSEMSYNVKAQPPAVLRCCT*AKMCLP
Trigger: AGGCAGGCACATCTTTGCCAAGGTGCAGCAGCGAAG...GACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp CAGCAGCAAGGCTGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTTGGATCTCCATCCGCTaGCGAGCAATGGTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: QQQGWACRNGKELWFRKAWISIR*RAMVWS
Trigger: GGACCAGACCATTGCTCGCAAGCGGATGGAGATCCA...AGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCAGCCTTGCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp GCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTATCGCCTTCCGCCTaGCTGGGACTGAACGTATTG +
Preference number: 5 (lower is better)
Translates to: AAFGSEMSYNVKAQPPAVLSPSA*LGLNVL
Trigger: CAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAG...GACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp GGGACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGTGTCAGAGGGCACTCCCAGCAGCCTaGCCAATCGGGGGTCCAATT +
Preference number: 5 (lower is better)
Translates to: GTERIGNVDPKLSLLCQRALPAA*PIGGPI
Trigger: AATTGGACCCCCGATTGGCAAGGCTGCTGGGAGTGC...CCTCTGACACAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR CAA 90 bp AGCTGGAGAGTAGAGGGTGACAGCAGACACTCCTCACCCCAGCCTACGTGTCTGAAAAAGTATAAGGCTTaGGGGACCAAGCAACAAGGA +
Preference number: 5 (lower is better)
Translates to: SWRVEGDSRHSSPQPTCLKKYKA*GTKQQG
Trigger: TCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT...CAGACACGTAGGCTGGGGTGAGGAGTGTCTGCTGTCACCCTCTACTCTCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CAA 90 bp AAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTTGTGTCAGAGGCTTTTaGATGGCCTCCTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: KCLTMSKHSLQQSYLGLPCVRGF*MASWIS
Trigger: GGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACA...AGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp TTTCGCTTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGTGTGTCAGAGGCTTTTaGATGGCCTCCTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: FRFCVRGFLMASWISIRLCVRGF*MASWIS
Trigger: GGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACA...CAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAAGCGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR CAA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGCTATCGCCTTCCGCCTaGCTGGGACTGAACGTATTG +
Preference number: 5 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWLSPSA*LGLNVL
Trigger: CAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAG...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp CAAACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCTATCGCCTTCCGCCTaGCTGGGACTGAACGTATTG +
Preference number: 5 (lower is better)
Translates to: QTQQPLVRKCLTMSKHSLLSPSA*LGLNVL
Trigger: CAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAG...GAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp TGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGGGCCCGTACAGCTCCTaGTCCAGCTCAATGACGAGG +
Preference number: 5 (lower is better)
Translates to: WACRNGKELWFRKARKSLGPYSS*SSSMTR
Trigger: CCTCGTCATTGAGCTGGACAAGGAGCTGTACGGGCC...CAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp AACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAAGGGTGCACTTGACGTaGAGGTCTCCAGGCCGTTTT +
Preference number: 5 (lower is better)
Translates to: NPAAFGSEMSYNVKAQPPRVHLT*RSPGRF
Trigger: AAAACGGCCTGGAGACCTCAACGTCAAGTGCACCCT...TGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp CAAACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCAGGGTGCACTTGACGTaGAGGTCTCCAGGCCGTTTT +
Preference number: 5 (lower is better)
Translates to: QTQQPLVRKCLTMSKHSLRVHLT*RSPGRF
Trigger: AAAACGGCCTGGAGACCTCAACGTCAAGTGCACCCT...GAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp CAGCAGCAAGGCTGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGGTGCACTTGACGTaGAGGTCTCCAGGCCGTTTT +
Preference number: 5 (lower is better)
Translates to: QQQGWACRNGKELWFRKARVHLT*RSPGRF
Trigger: AAAACGGCCTGGAGACCTCAACGTCAAGTGCACCCT...AGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCAGCCTTGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp TGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGAGCAGGAGGGTGCACTaGACGTTGAGGTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: WACRNGKELWFRKARKSLSRRVH*TLRSPG
Trigger: GCCTGGAGACCTCAACGTCAAGTGCACCCTCCTGCT...CAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp CAGCAGCAAGGCTGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTGGCGGCCAGAGCCGCTaGCATAGATTGAGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: QQQGWACRNGKELWFRKAGGQSR*HRLRKE
Trigger: TTCTTTCCTCAATCTATGCAAGCGGCTCTGGCCGCC...AGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCAGCCTTGCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp GCTGGGACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGTGTCAGCTATCGCCTTCCGCCTaGCTGGGACTGAACGTATTG +
Preference number: 5 (lower is better)
Translates to: AGTERIGNVDPKLSLLCQLSPSA*LGLNVL
Trigger: CAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAG...CTGACACAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGTCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR CAA 90 bp GCTGGGACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGTGTCAGAGGGTGCACTTGACGTaGAGGTCTCCAGGCCGTTTT +
Preference number: 5 (lower is better)
Translates to: AGTERIGNVDPKLSLLCQRVHLT*RSPGRF
Trigger: AAAACGGCCTGGAGACCTCAACGTCAAGTGCACCCT...CTGACACAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGTCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR CAA 90 bp GCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCATGGTCTCATGGATCTaGACATCAAGGGAGGCGATC +
Preference number: 5 (lower is better)
Translates to: AAFGSEMSYNVKAQPPAVMVSWI*TSREAI
Trigger: GATCGCCTCCCTTGATGTCAAGATCCATGAGACCAT...GACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGACATCAGTGATGATCTaGAGGTCTCGGCGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWTSVMI*RSRRWE
Trigger: TTCCCAGCGCCGAGACCTCAAGATCATCACTGATGT...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS TCA 90 bp TCAATGGTCTCATGGATCTTGACATCAAGGGAGGCGATCTCCTGCTaGTTGGTGGTAGAGGCCAGAAAATTGCTCATTTGGGCCTTCAGT +
Preference number: 5 (lower is better)
Translates to: SMVSWILTSREAISC*LVVEARKLLIWAFS
Trigger: ACTGAAGGCCCAAATGAGCAATTTTCTGGCCTCTACCACCAATCAGCAGGAGATCGCCTCCCTTGATGTCAAGATCCATGAGACCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCCCGAAGCTTTCGCTTTaGTGTCAGAGGCTTTTTGAT +
Preference number: 5 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPAPKLSL*CQRLFD
Trigger: ATCAAAAAGCCTCTGACACAAAAGCGAAAGCTTCGG...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp TTTTGTGTCAGAGGCTTTTTGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCACCGAAGCTTTCGCTTTaGTGTCAGAGGCTTTTTGAT +
Preference number: 5 (lower is better)
Translates to: FCVRGFLMASWISIRLRAPKLSL*CQRLFD
Trigger: ATCAAAAAGCCTCTGACACAAAAGCGAAAGCTTCGG...TGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR CAA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCAACTTCCTCTTCTGTTaGCTAGGATCATCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPANFLFC*LGSSSS
Trigger: ACTGCTGGATGATCCTAGCAAACAGAAGAGGAAGTT...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCACACTAATGACATGGTaGATGACAATGGGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPATLMTW*MTMGSG
Trigger: TCCAGACCCCATTGTCATCAACCATGTCATTAGTGT...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CAA 90 bp TGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGCAGAAAATTGCTCATTaGGGCCTTCAGTGGGTCGTC +
Preference number: 5 (lower is better)
Translates to: WFGNVLQCQSTASSSPTWQKIAH*GLQWVV
Trigger: GACGACCCACTGAAGGCCCAAATGAGCAATTTTCTG...CCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CAA 90 bp AGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCAGAAAATTGCTCATTaGGGCCTTCAGTGGGTCGTC +
Preference number: 5 (lower is better)
Translates to: SSLWFGNVLQCQSTASSSQKIAH*GLQWVV
Trigger: GACGACCCACTGAAGGCCCAAATGAGCAATTTTCTG...ACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp AGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTATGGTCTCATGGATCTaGACATCAAGGGAGGCGATC +
Preference number: 5 (lower is better)
Translates to: SSLWFGNVLQCQSTASSSMVSWI*TSREAI
Trigger: GATCGCCTCCCTTGATGTCAAGATCCATGAGACCAT...ACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS TCA 90 bp ATCACATCAGTGATGATCTTGACATCAAGGGAGGCGATCTCCTGCTaGTTGGTGGTAGAGGCCAGAAAATTGCTCATTTGGGCCTTCAGT +
Preference number: 5 (lower is better)
Translates to: ITSVMILTSREAISC*LVVEARKLLIWAFS
Trigger: ACTGAAGGCCCAAATGAGCAATTTTCTGGCCTCTACCACCAATCAGCAGGAGATCGCCTCCCTTGATGTCAAGATCATCACTGATGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450364.3
CDS-3UTR CAA 90 bp GTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCAACTTCCTCTTCTGTTaGCTAGGATCATCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: VRKCLTMSKHSLQQSYLGNFLFC*LGSSSS
Trigger: ACTGCTGGATGATCCTAGCAAACAGAAGAGGAAGTT...GCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp TCCTGCACTATCGCCTTCCGCCTTGCTGGGACTGAACGTATTGGAAATGTAGATAACTTCCTCTTCTGTTaGCTAGGATCATCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: SCTIAFRLAGTERIGNVDNFLFC*LGSSSS
Trigger: ACTGCTGGATGATCCTAGCAAACAGAAGAGGAAGTT...ATCTACATTTCCAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584400.5
CDS-3UTR CAA 90 bp AAGTGGCTCCCACATAGAAAACTTGCTCCCAAAATAGTGCAAATACCCAAAGGAAGGGTGCACTTGACGTaGAGGTCTCCAGGCCGTTTT +
Preference number: 5 (lower is better)
Translates to: KWLPHRKLAPKIVQIPKGRVHLT*RSPGRF
Trigger: AAAACGGCCTGGAGACCTCAACGTCAAGTGCACCCT...TCCTTTGGGTATTTGCACTATTTTGGGAGCAAGTTTTCTATGTGGGAGCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp GTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCAGCCGCTTGCATAGATaGAGGAAAGAAAAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: VRKCLTMSKHSLQQSYLGSRLHR*RKEKKE
Trigger: CTCCTTCTTTTCTTTCCTCAATCTATGCAAGCGGCT...GCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp AAGTGGCTCCCACATAGAAAACTTGCTCCCAAAATAGTGCAAATACCCAAAGGAGGCGGCCAGAGCCGCTaGCATAGATTGAGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: KWLPHRKLAPKIVQIPKGGGQSR*HRLRKE
Trigger: TTCTTTCCTCAATCTATGCAAGCGGCTCTGGCCGCC...TCCTTTGGGTATTTGCACTATTTTGGGAGCAAGTTTTCTATGTGGGAGCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp TCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTGCAGGGACAAAAGGATTTATTaGGAAATTTCCAAACCTGCC +
Preference number: 5 (lower is better)
Translates to: SYNVKAQPPAVLLGPACRDKRIY*EISKPA
Trigger: GGCAGGTTTGGAAATTTCCAAATAAATCCTTTTGTC...CCTGCAGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp CGCCTTGCTGGGACTGAACGTATTGGAAATGTAGATCCGAAGCTTTCGCTTTTGCCGAAGCTTTCGCTTTaGTGTCAGAGGCTTTTTGAT +
Preference number: 5 (lower is better)
Translates to: RLAGTERIGNVDPKLSLLPKLSL*CQRLFD
Trigger: ATCAAAAAGCCTCTGACACAAAAGCGAAAGCTTCGG...CAAAAGCGAAAGCTTCGGATCTACATTTCCAATACGTTCAGTCCCAGCAAGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580054.1
ENST00000584400.5
CDS-3UTR CAA 90 bp AGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCGAAGCTTTCGCTTTaGTGTCAGAGGCTTTTTGAT +
Preference number: 5 (lower is better)
Translates to: SSLWFGNVLQCQSTASSSPKLSL*CQRLFD
Trigger: ATCAAAAAGCCTCTGACACAAAAGCGAAAGCTTCGG...ACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTAGCACTCCCAGCAGCCTaGCCAATCGGGGGTCCAATT +
Preference number: 5 (lower is better)
Translates to: KKYKALGTKQQGILSLHLALPAA*PIGGPI
Trigger: AATTGGACCCCCGATTGGCAAGGCTGCTGGGAGTGC...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CAA 90 bp AACCCAGCAGCCTTTGGTTCGGAAATGTCTTACAATGTCAAAGCACAGCCTCCAACACTAATGACATGGTaGATGACAATGGGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: NPAAFGSEMSYNVKAQPPTLMTW*MTMGSG
Trigger: TCCAGACCCCATTGTCATCAACCATGTCATTAGTGT...TGGAGGCTGTGCTTTGACATTGTAAGACATTTCCGAACCAAAGGCTGCTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp TGGGCTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGCAGAAAATTGCTCATTaGGGCCTTCAGTGGGTCGTC +
Preference number: 5 (lower is better)
Translates to: WACRNGKELWFRKARKSLQKIAH*GLQWVV
Trigger: GACGACCCACTGAAGGCCCAAATGAGCAATTTTCTG...CAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp AAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCTAAAAAGTATAAGGCTTaGGGGACCAAGCAACAAGGA +
Preference number: 5 (lower is better)
Translates to: KCLTMSKHSLQQSYLGLPKKYKA*GTKQQG
Trigger: TCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT...AGGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CAA 90 bp GAAATGTCTTACAATGTCAAAGCACAGCCTCCAGCAGTCCTACTTGGGCCTGCCGACAAAAGGATTTATTaGGAAATTTCCAAACCTGCC +
Preference number: 5 (lower is better)
Translates to: EMSYNVKAQPPAVLLGPADKRIY*EISKPA
Trigger: GGCAGGTTTGGAAATTTCCAAATAAATCCTTTTGTC...GGCAGGCCCAAGTAGGACTGCTGGAGGCTGTGCTTTGACATTGTAAGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTACTATCGCCTTCCGCCTaGCTGGGACTGAACGTATTG +
Preference number: 5 (lower is better)
Translates to: KKYKALGTKQQGILSLHLLSPSA*LGLNVL
Trigger: CAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAG...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp CTTGTAGGAATGGCAAAGAACTTTGGTTTAGAAAGGCTAGGAAGAGTCTGGGCTACACTAATGACATGGTaGATGACAATGGGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: LVGMAKNFGLERLGRVWATLMTW*MTMGSG
Trigger: TCCAGACCCCATTGTCATCAACCATGTCATTAGTGT...AGCCCAGACTCTTCCTAGCCTTTCTAAACCAAAGTTCTTTGCCATTCCTACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp AAGTGGCTCCCACATAGAAAACTTGCTCCCAAAATAGTGCAAATACCCAAAGGAAACTTCCTCTTCTGTTaGCTAGGATCATCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: KWLPHRKLAPKIVQIPKGNFLFC*LGSSSS
Trigger: ACTGCTGGATGATCCTAGCAAACAGAAGAGGAAGTT...TCCTTTGGGTATTTGCACTATTTTGGGAGCAAGTTTTCTATGTGGGAGCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp AGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGCAGAAAATTGCTCATTaGGGCCTTCAGTGGGTCGTC +
Preference number: 5 (lower is better)
Translates to: SIRLWGPSNKESYHYIYKQKIAH*GLQWVV
Trigger: GACGACCCACTGAAGGCCCAAATGAGCAATTTTCTG...CTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS-3UTR CAA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTAACATCAGTGATGATCTaGAGGTCTCGGCGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: KKYKALGTKQQGILSLHLTSVMI*RSRRWE
Trigger: TTCCCAGCGCCGAGACCTCAAGATCATCACTGATGT...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp CTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTATAAGACTAAAGCTCCGAAGCTTTCGCTTTaGTGTCAGAGGCTTTTTGAT +
Preference number: 5 (lower is better)
Translates to: LWGPSNKESYHYIYKTKAPKLSL*CQRLFD
Trigger: ATCAAAAAGCCTCTGACACAAAAGCGAAAGCTTCGG...AGCTTTAGTCTTATAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS-3UTR CAA 90 bp AAAAAGTATAAGGCTTTGGGGACCAAGCAACAAGGAATCCTATCACTACATTTAACATCAGTGATGATCTaGACATCAAGGGAGGCGATC +
Preference number: 5 (lower is better)
Translates to: KKYKALGTKQQGILSLHLTSVMI*TSREAI
Trigger: GATCGCCTCCCTTGATGTCAAGATCATCACTGATGT...TAAATGTAGTGATAGGATTCCTTGTTGCTTGGTCCCCAAAGCCTTATACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450364.3
CDS GCA 72 bp CATGGTGGGTGGCATGCCAGGTCGAAGCGGAGCTGCTaGACCAAATGGGGAGCCAGCAGGGGGTCCCACCTG +
Preference number: 6 (lower is better)
Translates to: HGGWHARSKRSC*TKWGASRGSHL
Trigger: CAGGTGGGACCCCCTGCTGGCTCCCCATTTGGTGCAGCAGCTCCGCTTCGACCTGGCATGCCACCCACCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000580054.1
ENST00000613943.4
CDS CCA 72 bp TGGCATGCCAGGTCGAAGCGGAGCTGCTGCACCAAATaGGGAGCCAGCAGGGGGTCCCACCTGCAAGCCAGC +
Preference number: 6 (lower is better)
Translates to: WHARSKRSCCTK*GASRGSHLQAS
Trigger: GCTGGCTTGCAGGTGGGACCCCCTGCTGGCTCCCCATTTGGTGCAGCAGCTCCGCTTCGACCTGGCATGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000580054.1
ENST00000613943.4
CDS GCA 72 bp CATCATGGTGGGTGGCATGCCAGGTCGAAGCGGAGCTaGTGCACCAAATGGGGAGCCAGCAGGGGGTCCCAC +
Preference number: 6 (lower is better)
Translates to: HHGGWHARSKRS*CTKWGASRGSH
Trigger: GTGGGACCCCCTGCTGGCTCCCCATTTGGTGCAGCAGCTCCGCTTCGACCTGGCATGCCACCCACCATGATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000580054.1
ENST00000613943.4
CDS CCA 72 bp GCCAGGTCGCTGAGGCCTTGCTCCCTGACATTTCTGTaGAGCCCATCTGGGAGTCACCTCCACCCCCACCCG +
Preference number: 6 (lower is better)
Translates to: ARSLRPCSLTFL*SPSGSHLHPHP
Trigger: CGGGTGGGGGTGGAGGTGACTCCCAGATGGGCTCCACAGAAATGTCAGGGAGCAAGGCCTCAGCGACCTGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323347.14
CDS CCA 72 bp GGGGCACAAGCAGGCGTTTTCGGAATGGATCCATCATaGTGGGTGGCATGCCAGGTCGAAGCGGAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GAQAGVFGMDPS*WVACQVEAELL
Trigger: CAGCAGCTCCGCTTCGACCTGGCATGCCACCCACCATGATGGATCCATTCCGAAAACGCCTGCTTGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000580054.1
ENST00000613943.4
CDS CCA 72 bp AGGCTGCGCCTGGGGCACAAGCAGGCGTTTTCGGAATaGATCCATCATGGTGGGTGGCATGCCAGGTCGAAG +
Preference number: 6 (lower is better)
Translates to: RLRLGHKQAFSE*IHHGGWHARSK
Trigger: CTTCGACCTGGCATGCCACCCACCATGATGGATCCATTCCGAAAACGCCTGCTTGTGCCCCAGGCGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000580054.1
ENST00000613943.4
CDS GCA 72 bp GGCGTTTTCGGAATGGATCCATCATGGTGGGTGGCATaGCAGGTCGAAGCGGAGCTGCTGCACCAAATGGGG +
Preference number: 6 (lower is better)
Translates to: GVFGMDPSWWVA*QVEAELLHQMG
Trigger: CCCCATTTGGTGCAGCAGCTCCGCTTCGACCTGGCATGCCACCCACCATGATGGATCCATTCCGAAAACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000580054.1
ENST00000613943.4
CDS CCA 72 bp ATCTTGAGGTCTCGGCGCTGGGAACGGAGCCATTCCTaGATGAAGTCCTGGGGGTCGGTGCTAAAACTGAGC +
Preference number: 6 (lower is better)
Translates to: ILRSRRWERSHS*MKSWGSVLKLS
Trigger: GCTCAGTTTTAGCACCGACCCCCAGGACTTCATCCAGGAATGGCTCCGTTCCCAGCGCCGAGACCTCAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS CAA 90 bp CTCCGCGATCCGGGACTTGGCGATCTTAATTCCGGGTTCCGGGATTaGTCGATCCGGGCTCCGGGATTTCCTAATCCAAGTTCGCGAGTT +
Preference number: 6 (lower is better)
Translates to: LRDPGLGDLNSGFRD*SIRAPGFPNPSSRV
Trigger: AACTCGCGAACTTGGATTAGGAAATCCCGGAGCCCGGATCGACAAATCCCGGAACCCGGAATTAAGATCGCCAAGTCCCGGATCGCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577990.1
CDS CAA 90 bp GGAAGGCTAGAGGTGGTCAGGGCCACACATACTGTCAGAGGCTTTTaGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCAATGGTCTGG +
Preference number: 6 (lower is better)
Translates to: GRLEVVRATHTVRGF*MASWISIRLRAMVW
Trigger: CCAGACCATTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACAGTATGTGTGGCCCTGACCACCTCTAGCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577686.1
CDS TCA 72 bp AGAGAAGCCCCATTTCAGCCCTGGAGCTCCGGATACTaGAGATTCCTGGGCCCTGAAGGATGGAAGCAGGAC +
Preference number: 6 (lower is better)
Translates to: REAPFQPWSSGY*RFLGPEGWKQD
Trigger: GTCCTGCTTCCATCCTTCAGGGCCCAGGAATCTTCAGTATCCGGAGCTCCAGGGCTGAAATGGGGCTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581832.1
ENST00000584483.5
CDS CCA 72 bp AAGCAGGCGTTTTCGGAATGGATCCATCATGGTGGGTaGCATGCCAGGTCGAAGCGGAGCTGCTGCACCAAA +
Preference number: 6 (lower is better)
Translates to: KQAFSEWIHHGG*HARSKRSCCTK
Trigger: TTTGGTGCAGCAGCTCCGCTTCGACCTGGCATGCCACCCACCATGATGGATCCATTCCGAAAACGCCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000580054.1
ENST00000613943.4
CDS CCA 72 bp CGGCGCTGGGAACGGAGCCATTCCTGGATGAAGTCCTaGGGGTCGGTGCTAAAACTGAGCATGAAATCTCTC +
Preference number: 6 (lower is better)
Translates to: RRWERSHSWMKS*GSVLKLSMKSL
Trigger: GAGAGATTTCATGCTCAGTTTTAGCACCGACCCCCAGGACTTCATCCAGGAATGGCTCCGTTCCCAGCGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS CCA 72 bp CCAATCACATCAGTGATGATCTTGAGGTCTCGGCGCTaGGAACGGAGCCATTCCTGGATGAAGTCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: PITSVMILRSRR*ERSHSWMKSWG
Trigger: CCCCCAGGACTTCATCCAGGAATGGCTCCGTTCCCAGCGCCGAGACCTCAAGATCATCACTGATGTGATTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS CAA 72 bp GAGGTGGTCAGGGCCACACATACTGTCAGAGGCTTTTaGATGGCCTCCTGGATCTCCATCCGCTTGCGAGCA +
Preference number: 6 (lower is better)
Translates to: EVVRATHTVRGF*MASWISIRLRA
Trigger: TGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACAGTATGTGTGGCCCTGACCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577686.1
CDS TCA 72 bp AGGTGGTCAGGGCCACACATACTGTCAGAGGCTTTTTaGTGGCCTCCTGGATCTCCATCCGCTTGCGAGCAA +
Preference number: 6 (lower is better)
Translates to: RWSGPHILSEAF*WPPGSPSACEQ
Trigger: TTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACAGTATGTGTGGCCCTGACCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577686.1
CDS CCA 72 bp GCCACACATACTGTCAGAGGCTTTTTGATGGCCTCCTaGATCTCCATCCGCTTGCGAGCAATGGTCTGGTCC +
Preference number: 6 (lower is better)
Translates to: ATHTVRGFLMAS*ISIRLRAMVWS
Trigger: GGACCAGACCATTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACAGTATGTGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577686.1
CDS CAA 72 bp CTGCTGATTGGTGGTAGAGGCCAGAAAATTGCTCATTaGGGCCTTCAGTGGGTCGTCCACCTCCACATCGAT +
Preference number: 6 (lower is better)
Translates to: LLIGGRGQKIAH*GLQWVVHLHID
Trigger: ATCGATGTGGAGGTGGACGACCCACTGAAGGCCCAAATGAGCAATTTTCTGGCCTCTACCACCAATCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000450364.3
ENST00000613943.4
CDS TCA 72 bp TCATGGATCTTGACATCAAGGGAGGCGATCTCCTGCTaGTTGGTGGTAGAGGCCAGAAAATTGCTCATTTGG +
Preference number: 6 (lower is better)
Translates to: SWILTSREAISC*LVVEARKLLIW
Trigger: CCAAATGAGCAATTTTCTGGCCTCTACCACCAATCAGCAGGAGATCGCCTCCCTTGATGTCAAGATCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225742.13
ENST00000323347.14
ENST00000448276.7
ENST00000613943.4
CDS TCA 72 bp GTGATGATCTTGACATCAAGGGAGGCGATCTCCTGCTaGTTGGTGGTAGAGGCCAGAAAATTGCTCATTTGG +
Preference number: 6 (lower is better)
Translates to: VMILTSREAISC*LVVEARKLLIW
Trigger: CCAAATGAGCAATTTTCTGGCCTCTACCACCAATCAGCAGGAGATCGCCTCCCTTGATGTCAAGATCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450364.3