RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMARCA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000102038

Ensembl transcript IDs: ENST00000371121.5, ENST00000371122.8, ENST00000371123.5, ENST00000617310.4

Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGCAAAAGAACAAGGACTaGGAGGATTTTGATGAAGAC +
Preference number: 2 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKQKNKD*EDFDED
Trigger: GTCTTCATCAAAATCCTCTCAGTCCTTGTTCTTTTG...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
3UTR-3UTR TCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAATTTCTTAGAGTACCATaGATACACTGGAACTGGCAA +
Preference number: 2 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEFLRVP*IHWNWQ
Trigger: TTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAA...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
3UTR-3UTR TCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAACAAAAGAACAAGGACTaGGAGGATTTTGATGAAGAC +
Preference number: 2 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKQKNKD*EDFDED
Trigger: GTCTTCATCAAAATCCTCTCAGTCCTTGTTCTTTTG...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGGCCGCTCCCTCCTCCTaGGAGGTGGACGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKAAPSS*EVDGPG
Trigger: GCCCGGGCCGTCCACCTCTCAGGAGGAGGGAGCGGC...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAGCCGCTCCCTCCTCCTaGGAGGTGGACGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEAAPSS*EVDGPG
Trigger: GCCCGGGCCGTCCACCTCTCAGGAGGAGGGAGCGGC...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATGCCGCTCCCTCCTCCTaGGAGGTGGACGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNAAPSS*EVDGPG
Trigger: GCCCGGGCCGTCCACCTCTCAGGAGGAGGGAGCGGC...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGGGGACGAGGGCTCCTaGGCGGCGGCAGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKGDEGS*AAAVAA
Trigger: TGCAGCCACTGCCGCCGCCCAGGAGCCCTCGTCCCC...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAGGGGACGAGGGCTCCTaGGCGGCGGCAGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEGDEGS*AAAVAA
Trigger: TGCAGCCACTGCCGCCGCCCAGGAGCCCTCGTCCCC...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGGTCGCATCCGCGGCTaGCACGGTGGCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKGRIRG*HGGCHC
Trigger: GCAGTGGCAGCCACCGTGGCAGCCGCGGATGCGACC...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAGGTCGCATCCGCGGCTaGCACGGTGGCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEGRIRG*HGGCHC
Trigger: GCAGTGGCAGCCACCGTGGCAGCCGCGGATGCGACC...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAGGTCGCATCCGCGGCTaGCACGGTGGCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEGRIRG*HGGCHC
Trigger: GCAGTGGCAGCCACCGTGGCAGCCGCGGATGCGACC...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATGGGGACGAGGGCTCCTaGGCGGCGGCAGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNGDEGS*AAAVAA
Trigger: TGCAGCCACTGCCGCCGCCCAGGAGCCCTCGTCCCC...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAACCGCGGCTGCCACGGTaGCTGCCACTGCGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKPRLPR*LPLRQC
Trigger: ACACTGCCGCAGTGGCAGCCACCGTGGCAGCCGCGG...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAACCGCGGCTGCCACGGTaGCTGCCACTGCGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEPRLPR*LPLRQC
Trigger: ACACTGCCGCAGTGGCAGCCACCGTGGCAGCCGCGG...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGGCTGCCACGGTGGCTaGCACTGCGGCAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKGCHGG*HCGSVL
Trigger: CAGGACACTGCCGCAGTGGCAGCCACCGTGGCAGCC...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATCCGCGGCTGCCACGGTaGCTGCCACTGCGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNPRLPR*LPLRQC
Trigger: ACACTGCCGCAGTGGCAGCCACCGTGGCAGCCGCGG...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAACCTCCTCCTGAGAGGTaGACGGCCCGGGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKPPPER*TARAAR
Trigger: ACGAGCAGCCCGGGCCGTCCACCTCTCAGGAGGAGG...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAATCTCGCCCTTCTCCGTaGCCGCGGTGGCTTCGGTGG +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKESRPSP*PRWLRW
Trigger: CCACCGAAGCCACCGCGGCCACGGAGAAGGGCGAGA...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAATCTCGCCCTTCTCCGTaGCCGCGGTGGCTTCGGTGG +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKESRPSP*PRWLRW
Trigger: CCACCGAAGCCACCGCGGCCACGGAGAAGGGCGAGA...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGCAGTGTCCTGCTCCATaGCGTGGGAGCGGGAACGAG +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKQCPAP*RGSGNE
Trigger: CTCGTTCCCGCTCCCACGGCATGGAGCAGGACACTG...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAGTGGACGGCCCGGGCTaGTCGTCCTCTATGACCACG +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEVDGPG*SSSMTT
Trigger: CGTGGTCATAGAGGACGAGCAGCCCGGGCCGTCCAC...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGTGGACGGCCCGGGCTaGTCGTCCTCTATGACCACG +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKVDGPG*SSSMTT
Trigger: CGTGGTCATAGAGGACGAGCAGCCCGGGCCGTCCAC...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGCCTGGGCGGCGGCAGTaGCTGCACTGGAAAGAGCTA +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKPGRRQ*LHWKEL
Trigger: TAGCTCTTTCCAGTGCAGCCACTGCCGCCGCCCAGG...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATCCTCCTCCTGAGAGGTaGACGGCCCGGGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNPPPER*TARAAR
Trigger: ACGAGCAGCCCGGGCCGTCCACCTCTCAGGAGGAGG...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GAAACAGATTTAATGTTCTGCTCCAATATGCACATTTTAAATGGCCCAACAATGCCTCCTCCTGAGAGGTaGACGGCCCGGGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: ETDLMFCSNMHILNGPTMPPPER*TARAAR
Trigger: ACGAGCAGCCCGGGCCGTCCACCTCTCAGGAGGAGG...CATTGTTGGGCCATTTAAAATGTGCATATTGGAGCAGAACATTAAATCTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371122.8
CDS-3UTR GCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAACAGTGTCCTGCTCCATaGCGTGGGAGCGGGAACGAG +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKQCPAP*RGSGNE
Trigger: CTCGTTCCCGCTCCCACGGCATGGAGCAGGACACTG...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAACACGGTGGCTGCCACTaGGGCAGTGTCCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEHGGCH*GSVLLH
Trigger: ATGGAGCAGGACACTGCCGCAGTGGCAGCCACCGTG...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAACACGGTGGCTGCCACTaGGGCAGTGTCCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEHGGCH*GSVLLH
Trigger: ATGGAGCAGGACACTGCCGCAGTGGCAGCCACCGTG...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp GAAACAGATTTAATGTTCTGCTCCAATATGCACATTTTAAATGGCCCAACAATGGTGGACGGCCCGGGCTaGTCGTCCTCTATGACCACG +
Preference number: 4 (lower is better)
Translates to: ETDLMFCSNMHILNGPTMVDGPG*SSSMTT
Trigger: CGTGGTCATAGAGGACGAGCAGCCCGGGCCGTCCAC...CATTGTTGGGCCATTTAAAATGTGCATATTGGAGCAGAACATTAAATCTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371122.8
CDS-3UTR CCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAATCCTGCTCCATGCCGTaGGAGCGGGAACGAGTAGGG +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKESCSMP*ERERVG
Trigger: CCCTACTCGTTCCCGCTCCCACGGCATGGAGCAGGA...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATCCTGGGCGGCGGCAGTaGCTGCACTGGAAAGAGCTA +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNPGRRQ*LHWKEL
Trigger: TAGCTCTTTCCAGTGCAGCCACTGCCGCCGCCCAGG...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATTCCTGCTCCATGCCGTaGGAGCGGGAACGAGTAGGG +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNSCSMP*ERERVG
Trigger: CCCTACTCGTTCCCGCTCCCACGGCATGGAGCAGGA...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGCCTCCTCAGGGGATTTaGCCTCTACCTCTCGAGCTA +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKPPQGI*PLPLEL
Trigger: TAGCTCGAGAGGTAGAGGGCAAATCCCCTGAGGAGG...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGCGGCAGTGGCTGCACTaGAAAGAGCTAGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKRQWLH*KELDGA
Trigger: TGCTCCATCTAGCTCTTTCCAGTGCAGCCACTGCCG...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAGGCCGTGGAGCCTTTaGAATCTTTGGCTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKRPWSL*NLWLAD
Trigger: GTCAGCGAGCCAAAGATTCCAAAGGCTCCACGGCCT...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAACCTCCTCAGGGGATTTaGCCTCTACCTCTCGAGCTA +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKPPQGI*PLPLEL
Trigger: TAGCTCGAGAGGTAGAGGGCAAATCCCCTGAGGAGG...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAACGGCAGTGGCTGCACTaGAAAGAGCTAGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKERQWLH*KELDGA
Trigger: TGCTCCATCTAGCTCTTTCCAGTGCAGCCACTGCCG...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAAGGCCGTGGAGCCTTTaGAATCTTTGGCTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKERPWSL*NLWLAD
Trigger: GTCAGCGAGCCAAAGATTCCAAAGGCTCCACGGCCT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAACTTCTTCTTGCTCTGTaGGCCTATGGCGGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKELLLAL*AYGGSL
Trigger: GAGACTACCGCCATAGGCGCACAGAGCAAGAAGAAG...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGTCTTCATCTTCTTCTTaGTCTGTGCGCCTATGGCGG +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKSSSSS*SVRLWR
Trigger: CCGCCATAGGCGCACAGAGCAAGAAGAAGATGAAGA...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GAAACAGATTTAATGTTCTGCTCCAATATGCACATTTTAAATGGCCCAACAATGCGGCAGTGGCTGCACTaGAAAGAGCTAGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: ETDLMFCSNMHILNGPTMRQWLH*KELDGA
Trigger: TGCTCCATCTAGCTCTTTCCAGTGCAGCCACTGCCG...CATTGTTGGGCCATTTAAAATGTGCATATTGGAGCAGAACATTAAATCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371122.8
CDS-3UTR CCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAGCCTTTGGAATCTTTaGCTCGCTGACACGCAAAGC +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKSLWNL*LADTQS
Trigger: GCTTTGCGTGTCAGCGAGCCAAAGATTCCAAAGGCT...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GAAACAGATTTAATGTTCTGCTCCAATATGCACATTTTAAATGGCCCAACAATGAGGCCGTGGAGCCTTTaGAATCTTTGGCTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: ETDLMFCSNMHILNGPTMRPWSL*NLWLAD
Trigger: GTCAGCGAGCCAAAGATTCCAAAGGCTCCACGGCCT...CATTGTTGGGCCATTTAAAATGTGCATATTGGAGCAGAACATTAAATCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371122.8
CDS-3UTR TCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGTGTGAGCTTCATCAATaGCCAGGTATCGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKCELHQ*PGIASE
Trigger: TTCACTGGCGATACCTGGTCATTGATGAAGCTCACA...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGTTTTGCTCTTCTCTTTaGGCCAGAGCTGGATTTGGG +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKFCSSL*ARAGFG
Trigger: CCCAAATCCAGCTCTGGCTCAAAGAGAAGAGCAAAA...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGTCCTCTCTTTCTTCATaGGGGGTTTGTCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKSSLSS*GVCPSS
Trigger: ACTGGATGGACAAACCCCGCATGAAGAAAGAGAGGA...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAACCACATCAGCACTTaGCAGGTTAATTCCGAGACC +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKNHIST*QVNSET
Trigger: GGTCTCGGAATTAACCTGGCAAGTGCTGATGTGGTT...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGTGGAGCCTTGTATCTTaGAATTTTGGCATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKWSLVS*NFGIQG
Trigger: GCCCTGGATGCCAAAATTGCAAGATACAAGGCTCCA...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCCTTTGGAATCTTTaGCTCGCTGACACGCAAAGC +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKESLWNL*LADTQS
Trigger: GCTTTGCGTGTCAGCGAGCCAAAGATTCCAAAGGCT...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAACTGTTTTGGAGGCCGTaGAGCCTTTGGAATCTTTGG +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKELFWRP*SLWNLW
Trigger: CCAAAGATTCCAAAGGCTCCACGGCCTCCAAAACAG...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAACTGTTTTGGAGGCCGTaGAGCCTTTGGAATCTTTGG +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKLFWRP*SLWNLW
Trigger: CCAAAGATTCCAAAGGCTCCACGGCCTCCAAAACAG...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAACATTTGGCTGTTTTaGAGGCCGTGGAGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKENIWLF*RPWSLW
Trigger: CCAAAGGCTCCACGGCCTCCAAAACAGCCAAATGTT...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAAACATTTGGCTGTTTTaGAGGCCGTGGAGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKENIWLF*RPWSLW
Trigger: CCAAAGGCTCCACGGCCTCCAAAACAGCCAAATGTT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGGGAACTAAAACCATGTaGGGTCCAGGAATATTTCGG +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKGTKTM*GPGIFR
Trigger: CCGAAATATTCCTGGACCTCACATGGTTTTAGTTCC...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAATGTGAGCTTCATCAATaGCCAGGTATCGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKCELHQ*PGIASE
Trigger: TTCACTGGCGATACCTGGTCATTGATGAAGCTCACA...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAACGTACTGGTTTCTTCTaGCCAATACGATGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKERTGFF*PIRCAR
Trigger: TCGAGCACATCGTATTGGTCAGAAGAAACCAGTACG...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGTTCCCAAAATACAGCTaGATACTCCATGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKFPKYS*ILHDLL
Trigger: GAGGAGGTCATGGAGTATTCAGCTGTATTTTGGGAA...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAATCCTCTCTTTCTTCATaGGGGGTTTGTCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKSSLSS*GVCPSS
Trigger: ACTGGATGGACAAACCCCGCATGAAGAAAGAGAGGA...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAATCCTCTCTTTCTTCATaGGGGGTTTGTCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKESSLSS*GVCPSS
Trigger: ACTGGATGGACAAACCCCGCATGAAGAAAGAGAGGA...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAAACCACATCAGCACTTaGCAGGTTAATTCCGAGACC +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKENHIST*QVNSET
Trigger: GGTCTCGGAATTAACCTGGCAAGTGCTGATGTGGTT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGATCCACTGCGTAGTTTaGTTTGCGTTCTCGTTTAGG +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKIHCVV*FAFSFR
Trigger: CCTAAACGAGAACGCAAAGCAAACTACGCAGTGGAT...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAATCAGTGGTATAAGGTaGACCAGGTTCAGCACCATC +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEISGIR*TRFSTI
Trigger: GATGGTGCTGAACCTGGTCCACCTTATACCACTGAT...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAATCAGTGGTATAAGGTaGACCAGGTTCAGCACCATC +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEISGIR*TRFSTI
Trigger: GATGGTGCTGAACCTGGTCCACCTTATACCACTGAT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATAGCCTTTGGAATCTTTaGCTCGCTGACACGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNSLWNL*LADTQS
Trigger: GCTTTGCGTGTCAGCGAGCCAAAGATTCCAAAGGCT...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATCTGTTTTGGAGGCCGTaGAGCCTTTGGAATCTTTGG +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNLFWRP*SLWNLW
Trigger: CCAAAGATTCCAAAGGCTCCACGGCCTCCAAAACAG...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATAACATTTGGCTGTTTTaGAGGCCGTGGAGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNNIWLF*RPWSLW
Trigger: CCAAAGGCTCCACGGCCTCCAAAACAGCCAAATGTT...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAAGCCAGAGCTGGATTTaGGATATCAGGATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKESQSWI*DIRIPW
Trigger: CCAAGGAATCCTGATATCCCAAATCCAGCTCTGGCT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGTTCTTCAGTCTCTTCTaGTGTAAGAGGTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKFFSLF*CKRFSS
Trigger: GGAGCTGAACCTCTTACACCAGAAGAGACTGAAGAA...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAGTGTTACAGCGTCTCTaGAATTCCATGGCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEVLQRL*NSMAVL
Trigger: TAGGACTGCCATGGAATTCCAGAGACGCTGTAACAC...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAGTGTTACAGCGTCTCTaGAATTCCATGGCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEVLQRL*NSMAVL
Trigger: TAGGACTGCCATGGAATTCCAGAGACGCTGTAACAC...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAGGAACTAAAACCATGTaGGGTCCAGGAATATTTCGG +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEGTKTM*GPGIFR
Trigger: CCGAAATATTCCTGGACCTCACATGGTTTTAGTTCC...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATTGTGAGCTTCATCAATaGCCAGGTATCGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNCELHQ*PGIASE
Trigger: TTCACTGGCGATACCTGGTCATTGATGAAGCTCACA...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGCAGGCAATAAAAAGTTaGGTAAGGCCCACAGTTCAT +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKQAIKS*VRPTVH
Trigger: ATGAACTGTGGGCCTTACTCAACTTTTTATTGCCTG...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATTTTTGCTCTTCTCTTTaGGCCAGAGCTGGATTTGGG +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNFCSSL*ARAGFG
Trigger: CCCAAATCCAGCTCTGGCTCAAAGAGAAGAGCAAAA...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp GAAACAGATTTAATGTTCTGCTCCAATATGCACATTTTAAATGGCCCAACAATGTTTTGCTCTTCTCTTTaGGCCAGAGCTGGATTTGGG +
Preference number: 4 (lower is better)
Translates to: ETDLMFCSNMHILNGPTMFCSSL*ARAGFG
Trigger: CCCAAATCCAGCTCTGGCTCAAAGAGAAGAGCAAAA...CATTGTTGGGCCATTTAAAATGTGCATATTGGAGCAGAACATTAAATCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371122.8
CDS-3UTR TCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAATTCCCAAAATACAGCTaGATACTCCATGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEFPKYS*ILHDLL
Trigger: GAGGAGGTCATGGAGTATTCAGCTGTATTTTGGGAA...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAAGGCCCACAGTTCATaGAGGTTATTCTGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEKAHSS*RLFCKG
Trigger: ACCTTTGCAGAATAACCTGCATGAACTGTGGGCCTT...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAAAGGCCCACAGTTCATaGAGGTTATTCTGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKKAHSS*RLFCKG
Trigger: ACCTTTGCAGAATAACCTGCATGAACTGTGGGCCTT...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGTATACCATTCTCGTTaGATCTTACTCAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKVYHSR*ILLSPK
Trigger: CTTGGGGCTGAGTAAGATGCAACGAGAATGGTATAC...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAGTATACCATTCTCGTTaGATCTTACTCAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEVYHSR*ILLSPK
Trigger: CTTGGGGCTGAGTAAGATGCAACGAGAATGGTATAC...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAATCCACTGCGTAGTTTaGTTTGCGTTCTCGTTTAGG +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEIHCVV*FAFSFR
Trigger: CCTAAACGAGAACGCAAAGCAAACTACGCAGTGGAT...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAATCCACTGCGTAGTTTaGTTTGCGTTCTCGTTTAGG +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEIHCVV*FAFSFR
Trigger: CCTAAACGAGAACGCAAAGCAAACTACGCAGTGGAT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATTGGAGCCTTGTATCTTaGAATTTTGGCATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNWSLVS*NFGIQG
Trigger: GCCCTGGATGCCAAAATTGCAAGATACAAGGCTCCA...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGTGGTTCCATACTGAATaGGCAACTGATGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKWFHTE*ATDEME
Trigger: CTCCATTTCATCAGTTGCGCATTCAGTATGGAACCA...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAATGACACGGAGAGATaGGACCCATCGTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKNDTER*DPSFKF
Trigger: GAATTTAAACGATGGGTCCCATCTCTCCGTGTCATT...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATATCAGTGGTATAAGGTaGACCAGGTTCAGCACCATC +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNISGIR*TRFSTI
Trigger: GATGGTGCTGAACCTGGTCCACCTTATACCACTGAT...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAATTAGAAGCAAAAACATaGGTGGCTCCATGCCGTATC +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKLEAKT*VAPCRI
Trigger: GATACGGCATGGAGCCACCCATGTTTTTGCTTCTAA...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAATTAGAAGCAAAAACATaGGTGGCTCCATGCCGTATC +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKELEAKT*VAPCRI
Trigger: GATACGGCATGGAGCCACCCATGTTTTTGCTTCTAA...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATAGCCAGAGCTGGATTTaGGATATCAGGATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNSQSWI*DIRIPW
Trigger: CCAAGGAATCCTGATATCCCAAATCCAGCTCTGGCT...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGGCGCAACTGATGAAATaGAGCCTTGTATCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKAQLMK*SLVSCN
Trigger: ATTGCAAGATACAAGGCTCCATTTCATCAGTTGCGC...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATGGAACTAAAACCATGTaGGGTCCAGGAATATTTCGG +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNGTKTM*GPGIFR
Trigger: CCGAAATATTCCTGGACCTCACATGGTTTTAGTTCC...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAACAGGCAATAAAAAGTTaGGTAAGGCCCACAGTTCAT +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEQAIKS*VRPTVH
Trigger: ATGAACTGTGGGCCTTACTCAACTTTTTATTGCCTG...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAATTTTACCACTGTTGCTaGCAATATGCTCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEFYHCC*QYAHQW
Trigger: CCACTGATGAGCATATTGTCAGCAACAGTGGTAAAA...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAATCTATTGCTTCCCTTTaGCCCAGAAATTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKESIASL*PRNSTS
Trigger: AGAAGTGGAATTTCTGGGTCAAAGGGAAGCAATAGA...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371121.5
ENST00000371122.8
CDS-3UTR TCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAATACTGATCCTTCGTTaGATTCTTGCTTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEILILR*ILASPR
Trigger: ACGTGGAGAAGCAAGAATTCAACGAAGGATCAGTAT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAATACTGATCCTTCGTTaGATTCTTGCTTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKILILR*ILASPR
Trigger: ACGTGGAGAAGCAAGAATTCAACGAAGGATCAGTAT...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATAAGGCCCACAGTTCATaGAGGTTATTCTGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNKAHSS*RLFCKG
Trigger: ACCTTTGCAGAATAACCTGCATGAACTGTGGGCCTT...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATGTATACCATTCTCGTTaGATCTTACTCAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNVYHSR*ILLSPK
Trigger: CTTGGGGCTGAGTAAGATGCAACGAGAATGGTATAC...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAACATGGGTGGCTCCATaGCGTATCATTTGTAACATT +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKETWVAP*RIICNI
Trigger: AATGTTACAAATGATACGGCATGGAGCCACCCATGT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAACAATCCATTCCACCATaGCAAGCTTCTGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKQSIPP*QASVFL
Trigger: GAGAAAAACAGAAGCTTGGCATGGTGGAATGGATTG...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAACAATCCATTCCACCATaGCAAGCTTCTGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEQSIPP*QASVFL
Trigger: GAGAAAAACAGAAGCTTGGCATGGTGGAATGGATTG...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAATGGTTCCATACTGAATaGGCAACTGATGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKWFHTE*ATDEME
Trigger: CTCCATTTCATCAGTTGCGCATTCAGTATGGAACCA...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAATGGTTCCATACTGAATaGGCAACTGATGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEWFHTE*ATDEME
Trigger: CTCCATTTCATCAGTTGCGCATTCAGTATGGAACCA...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGCATTGGAGTTTTAGTTaGCCGTTTCTTCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKHWSFS*PFLLFC
Trigger: GCAGAAAAGAAGAAACGGGCAACTAAAACTCCAATG...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAAATGACACGGAGAGATaGGACCCATCGTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKENDTER*DPSFKF
Trigger: GAATTTAAACGATGGGTCCCATCTCTCCGTGTCATT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATAGCAAGCGAGTCATCTaGCTGAAAATGAGAACCCTT +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNSKRVI*LKMRTL
Trigger: AAGGGTTCTCATTTTCAGCCAGATGACTCGCTTGCT...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GAAACAGATTTAATGTTCTGCTCCAATATGCACATTTTAAATGGCCCAACAATGAGCAAGCGAGTCATCTaGCTGAAAATGAGAACCCTT +
Preference number: 4 (lower is better)
Translates to: ETDLMFCSNMHILNGPTMSKRVI*LKMRTL
Trigger: AAGGGTTCTCATTTTCAGCCAGATGACTCGCTTGCT...CATTGTTGGGCCATTTAAAATGTGCATATTGGAGCAGAACATTAAATCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371122.8
CDS-3UTR CCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAACGGAATACACGTACTaGTTTCTTCTGACCAATACG +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKETEYTY*FLLTNT
Trigger: CGTATTGGTCAGAAGAAACCAGTACGTGTATTCCGT...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAACGGAATACACGTACTaGTTTCTTCTGACCAATACG +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKTEYTY*FLLTNT
Trigger: CGTATTGGTCAGAAGAAACCAGTACGTGTATTCCGT...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAAAGCAAAAACATGGGTaGCTCCATGCCGTATCATTT +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEKQKHG*LHAVSF
Trigger: AAATGATACGGCATGGAGCCACCCATGTTTTTGCTT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAAAGCAAAAACATGGGTaGCTCCATGCCGTATCATTT +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKKQKHG*LHAVSF
Trigger: AAATGATACGGCATGGAGCCACCCATGTTTTTGCTT...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAATCTTTGAGCCAGAGCTaGATTTGGGATATCAGGATT +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKESLSQS*IWDIRI
Trigger: AATCCTGATATCCCAAATCCAGCTCTGGCTCAAAGA...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATTTCTTCAGTCTCTTCTaGTGTAAGAGGTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNFFSLF*CKRFSS
Trigger: GGAGCTGAACCTCTTACACCAGAAGAGACTGAAGAA...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAGCGCAACTGATGAAATaGAGCCTTGTATCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEAQLMK*SLVSCN
Trigger: ATTGCAAGATACAAGGCTCCATTTCATCAGTTGCGC...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGCGCAACTGATGAAATaGAGCCTTGTATCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKAQLMK*SLVSCN
Trigger: ATTGCAAGATACAAGGCTCCATTTCATCAGTTGCGC...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAACAGTCAAATCTAAACTaGGGAGCATTTCGTACACAC +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEQSNLN*GAFRTH
Trigger: GTGTGTACGAAATGCTCCCCAGTTTAGATTTGACTG...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGGCAGCAAGTTTGAGTTaGAATGAAGAAACGTTTTTC +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKAASLS*NEETFF
Trigger: GAAAAACGTTTCTTCATTTCAACTCAAACTTGCTGC...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGCAGCCAAAATGCCATTaGCTCCATTTTCATATAAAG +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKQPKCH*LHFHIK
Trigger: CTTTATATGAAAATGGAGTCAATGGCATTTTGGCTG...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAACCAGGTATCGCCAGTaGAACTTTTTGAATACAGAT +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKETRYRQ*NFLNTD
Trigger: ATCTGTATTCAAAAAGTTTCACTGGCGATACCTGGT...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAACCAGGTATCGCCAGTaGAACTTTTTGAATACAGAT +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKETRYRQ*NFLNTD
Trigger: ATCTGTATTCAAAAAGTTTCACTGGCGATACCTGGT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGTCAAACAGATATGGATaGTTACAACACTTTCGAAGC +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKSNRYG*LQHFRS
Trigger: GCTTCGAAAGTGTTGTAATCATCCATATCTGTTTGA...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATTTTTACCACTGTTGCTaGCAATATGCTCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNFYHCC*QYAHQW
Trigger: CCACTGATGAGCATATTGTCAGCAACAGTGGTAAAA...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGTTGAACCCTGTTCTTTaGGTTTGGCCAATAGTTTAT +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKLNPVL*VWPIVY
Trigger: ATAAACTATTGGCCAAACTCAAAGAACAGGGTTCAA...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATTCTATTGCTTCCCTTTaGCCCAGAAATTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNSIASL*PRNSTS
Trigger: AGAAGTGGAATTTCTGGGTCAAAGGGAAGCAATAGA...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371121.5
ENST00000371122.8
CDS-3UTR TCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGTCTCCACGTTCAATTTaGGCCATAATTTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKSPRSI*AIIFSM
Trigger: CATTGAGAAAATTATGGCTCAAATTGAACGTGGAGA...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAACAAAAGAACAAGGACTaGGAGGATTTTGATGAAGAC +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEQKNKD*EDFDED
Trigger: GTCTTCATCAAAATCCTCTCAGTCCTTGTTCTTTTG...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGCAACACTTTCGAAGCTaGATCAGAATGTTTAAGAGT +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKQHFRS*IRMFKS
Trigger: ACTCTTAAACATTCTGATGCAGCTTCGAAAGTGTTG...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGATTAAAAGCCTCTATTaGTTCCCTTTGACCCAGAAA +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKIKSLY*FPLTQK
Trigger: TTTCTGGGTCAAAGGGAAGCAATAGAGGCTTTTAAT...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371121.5
ENST00000371122.8
CDS-3UTR GCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATACATGGGTGGCTCCATaGCGTATCATTTGTAACATT +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNTWVAP*RIICNI
Trigger: AATGTTACAAATGATACGGCATGGAGCCACCCATGT...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATCAATCCATTCCACCATaGCAAGCTTCTGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNQSIPP*QASVFL
Trigger: GAGAAAAACAGAAGCTTGGCATGGTGGAATGGATTG...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGTGTCCTGTAATTCATTaGAACGTTCCCAAAATACAG +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKCPVIH*NVPKIQ
Trigger: CTGTATTTTGGGAACGTTGCAATGAATTACAGGACA...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAACCTTCGTTGAATTCTTaGTTCTCCACGTTCAATTTG +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEPSLNS*FSTFNL
Trigger: CAAATTGAACGTGGAGAAGCAAGAATTCAACGAAGG...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAACATTGGAGTTTTAGTTaGCCGTTTCTTCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKHWSFS*PFLLFC
Trigger: GCAGAAAAGAAGAAACGGGCAACTAAAACTCCAATG...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAATGCTAATCACAGTATaGAGTAACACAAACAAGCCC +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEMLITV*SNTNKP
Trigger: GGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAATGCTAATCACAGTATaGAGTAACACAAACAAGCCC +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEMLITV*SNTNKP
Trigger: GGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGTATTTCCTTTTTAGGTaGCAGACTCTTCTCTACATC +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKYFLFR*QTLLYI
Trigger: GATGTAGAGAAGAGTCTGCCACCTAAAAAGGAAATA...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GAAACAGATTTAATGTTCTGCTCCAATATGCACATTTTAAATGGCCCAACAATGACGGAATACACGTACTaGTTTCTTCTGACCAATACG +
Preference number: 4 (lower is better)
Translates to: ETDLMFCSNMHILNGPTMTEYTY*FLLTNT
Trigger: CGTATTGGTCAGAAGAAACCAGTACGTGTATTCCGT...CATTGTTGGGCCATTTAAAATGTGCATATTGGAGCAGAACATTAAATCTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371122.8
CDS-3UTR CCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAAGCTTGTTAGACTGTTaGTCAATGAGTCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKSLLDC*SMSLPC
Trigger: ACAAGGAAGACTCATTGACCAACAGTCTAACAAGCT...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCTTGTTAGACTGTTaGTCAATGAGTCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKESLLDC*SMSLPC
Trigger: ACAAGGAAGACTCATTGACCAACAGTCTAACAAGCT...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATAAGCAAAAACATGGGTaGCTCCATGCCGTATCATTT +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNKQKHG*LHAVSF
Trigger: AAATGATACGGCATGGAGCCACCCATGTTTTTGCTT...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGGATATCAGGATTCCTTaGAACCTTATAGCCTATTGT +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKDIRIP*NLIAYC
Trigger: ACAATAGGCTATAAGGTTCCAAGGAATCCTGATATC...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATTCTTTGAGCCAGAGCTaGATTTGGGATATCAGGATT +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNSLSQS*IWDIRI
Trigger: AATCCTGATATCCCAAATCCAGCTCTGGCTCAAAGA...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATCAGTCAAATCTAAACTaGGGAGCATTTCGTACACAC +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNQSNLN*GAFRTH
Trigger: GTGTGTACGAAATGCTCCCCAGTTTAGATTTGACTG...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGCAGCAAGTTTGAGTTaGAATGAAGAAACGTTTTTC +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKAASLS*NEETFF
Trigger: GAAAAACGTTTCTTCATTTCAACTCAAACTTGCTGC...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAACAGCCAAAATGCCATTaGCTCCATTTTCATATAAAG +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEQPKCH*LHFHIK
Trigger: CTTTATATGAAAATGGAGTCAATGGCATTTTGGCTG...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAACAGCCAAAATGCCATTaGCTCCATTTTCATATAAAG +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKQPKCH*LHFHIK
Trigger: CTTTATATGAAAATGGAGTCAATGGCATTTTGGCTG...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAGGTTTTAAAACTGCATaGAGTCTTTCCACGAGTTTT +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEGFKTA*SLSTSF
Trigger: AAAACTCGTGGAAAGACTTCATGCAGTTTTAAAACC...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAGGTTTTAAAACTGCATaGAGTCTTTCCACGAGTTTT +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEGFKTA*SLSTSF
Trigger: AAAACTCGTGGAAAGACTTCATGCAGTTTTAAAACC...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAATCAAACAGATATGGATaGTTACAACACTTTCGAAGC +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKSNRYG*LQHFRS
Trigger: GCTTCGAAAGTGTTGTAATCATCCATATCTGTTTGA...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAATTGAACCCTGTTCTTTaGGTTTGGCCAATAGTTTAT +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKLNPVL*VWPIVY
Trigger: ATAAACTATTGGCCAAACTCAAAGAACAGGGTTCAA...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAATCTCCACGTTCAATTTaGGCCATAATTTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKSPRSI*AIIFSM
Trigger: CATTGAGAAAATTATGGCTCAAATTGAACGTGGAGA...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATTTTCTTAGAGTACCATaGATACACTGGAACTGGCAA +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNFLRVP*IHWNWQ
Trigger: TTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAA...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAATTCAAATCTCTTTaGTCGGTCGGCTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKKFKSL*SVGFHF
Trigger: AAAATGAAAGCCGACCGAGCAAAGAGATTTGAATTT...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAGAATCAAAGTCATCTaGAGAATTAAAGACATCAGG +
Preference number: 4 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKRIKVI*RIKDIR
Trigger: CCTGATGTCTTTAATTCTGCAGATGACTTTGATTCT...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAACAACACTTTCGAAGCTaGATCAGAATGTTTAAGAGT +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKQHFRS*IRMFKS
Trigger: ACTCTTAAACATTCTGATGCAGCTTCGAAAGTGTTG...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAATGTCCTGTAATTCATTaGAACGTTCCCAAAATACAG +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKCPVIH*NVPKIQ
Trigger: CTGTATTTTGGGAACGTTGCAATGAATTACAGGACA...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAATGTCCTGTAATTCATTaGAACGTTCCCAAAATACAG +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKECPVIH*NVPKIQ
Trigger: CTGTATTTTGGGAACGTTGCAATGAATTACAGGACA...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAATATAGTTCTTTCCTTTaGTGGTTCCATACTGAATGC +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEYSSFL*WFHTEC
Trigger: GCATTCAGTATGGAACCAGCAAAGGAAAGAACTATA...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATATGCTAATCACAGTATaGAGTAACACAAACAAGCCC +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNMLITV*SNTNKP
Trigger: GGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAATATTTCCTTTTTAGGTaGCAGACTCTTCTCTACATC +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKYFLFR*QTLLYI
Trigger: GATGTAGAGAAGAGTCTGCCACCTAAAAAGGAAATA...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAGATATCAGGATTCCTTaGAACCTTATAGCCTATTGT +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEDIRIP*NLIAYC
Trigger: ACAATAGGCTATAAGGTTCCAAGGAATCCTGATATC...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR TCA 90 bp GAAACAGATTTAATGTTCTGCTCCAATATGCACATTTTAAATGGCCCAACAATGTTGAACCCTGTTCTTTaGGTTTGGCCAATAGTTTAT +
Preference number: 4 (lower is better)
Translates to: ETDLMFCSNMHILNGPTMLNPVL*VWPIVY
Trigger: ATAAACTATTGGCCAAACTCAAAGAACAGGGTTCAA...CATTGTTGGGCCATTTAAAATGTGCATATTGGAGCAGAACATTAAATCTGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371122.8
CDS-3UTR GCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAAATTCAAATCTCTTTaGTCGGTCGGCTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEKFKSL*SVGFHF
Trigger: AAAATGAAAGCCGACCGAGCAAAGAGATTTGAATTT...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAAAATTCAAATCTCTTTaGTCGGTCGGCTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEKFKSL*SVGFHF
Trigger: AAAATGAAAGCCGACCGAGCAAAGAGATTTGAATTT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATCAACACTTTCGAAGCTaGATCAGAATGTTTAAGAGT +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNQHFRS*IRMFKS
Trigger: ACTCTTAAACATTCTGATGCAGCTTCGAAAGTGTTG...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAACATAACCACGCCACATaGAATAATCTTCCAAAATAT +
Preference number: 4 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEHNHAT*NNLPKY
Trigger: ATATTTTGGAAGATTATTGCATGTGGCGTGGTTATG...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAACATAACCACGCCACATaGAATAATCTTCCAAAATAT +
Preference number: 4 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKHNHAT*NNLPKY
Trigger: ATATTTTGGAAGATTATTGCATGTGGCGTGGTTATG...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAACATAACCACGCCACATaGAATAATCTTCCAAAATAT +
Preference number: 4 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEHNHAT*NNLPKY
Trigger: ATATTTTGGAAGATTATTGCATGTGGCGTGGTTATG...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATTATAGTTCTTTCCTTTaGTGGTTCCATACTGAATGC +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNYSSFL*WFHTEC
Trigger: GCATTCAGTATGGAACCAGCAAAGGAAAGAACTATA...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATTATTTCCTTTTTAGGTaGCAGACTCTTCTCTACATC +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNYFLFR*QTLLYI
Trigger: GATGTAGAGAAGAGTCTGCCACCTAAAAAGGAAATA...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATAGAATCAAAGTCATCTaGAGAATTAAAGACATCAGG +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNRIKVI*RIKDIR
Trigger: CCTGATGTCTTTAATTCTGCAGATGACTTTGATTCT...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR GCA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATATTAAAAGCCTCTATTaGTTCCTCTCTTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNIKSLY*FLSFFM
Trigger: CATGAAGAAAGAGAGGAAGCAATAGAGGCTTTTAAT...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371123.5
CDS GCA 90 bp GTCGCATCCGCGGCTGCCACGGTGGCTGCCACTGCGGCAGTGTCCTaGTCCATGCCGTGGGAGCGGGAACGAGTAGGGGGACAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: VASAAATVAATAAVS*SMPWERERVGGQGR
Trigger: CCTGCCTTGTCCCCCTACTCGTTCCCGCTCCCACGGCATGGAGCAGGACACTGCCGCAGTGGCAGCCACCGTGGCAGCCGCGGATGCGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS CCA 90 bp GCTGCCACGGTGGCTGCCACTGCGGCAGTGTCCTGCTCCATGCCGTaGGAGCGGGAACGAGTAGGGGGACAAGGCAGGGGACGAGGGCTC +
Preference number: 5 (lower is better)
Translates to: AATVAATAAVSCSMP*ERERVGGQGRGRGL
Trigger: GAGCCCTCGTCCCCTGCCTTGTCCCCCTACTCGTTCCCGCTCCCACGGCATGGAGCAGGACACTGCCGCAGTGGCAGCCACCGTGGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS GCA 90 bp CACGATAGTGGCGGTCGCATCCGCGGCTGCCACGGTGGCTGCCACTaGGGCAGTGTCCTGCTCCATGCCGTGGGAGCGGGAACGAGTAGG +
Preference number: 5 (lower is better)
Translates to: HDSGGRIRGCHGGCH*GSVLLHAVGAGTSR
Trigger: CCTACTCGTTCCCGCTCCCACGGCATGGAGCAGGACACTGCCGCAGTGGCAGCCACCGTGGCAGCCGCGGATGCGACCGCCACTATCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS GCA 90 bp TATGACCACGATAGTGGCGGTCGCATCCGCGGCTGCCACGGTGGCTaGCACTGCGGCAGTGTCCTGCTCCATGCCGTGGGAGCGGGAACG +
Preference number: 5 (lower is better)
Translates to: YDHDSGGRIRGCHGG*HCGSVLLHAVGAGT
Trigger: CGTTCCCGCTCCCACGGCATGGAGCAGGACACTGCCGCAGTGGCAGCCACCGTGGCAGCCGCGGATGCGACCGCCACTATCGTGGTCATA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS GCA 90 bp CTGCTCGTCCTCTATGACCACGATAGTGGCGGTCGCATCCGCGGCTaGCACGGTGGCTGCCACTGCGGCAGTGTCCTGCTCCATGCCGTG +
Preference number: 5 (lower is better)
Translates to: LLVLYDHDSGGRIRG*HGGCHCGSVLLHAV
Trigger: CACGGCATGGAGCAGGACACTGCCGCAGTGGCAGCCACCGTGGCAGCCGCGGATGCGACCGCCACTATCGTGGTCATAGAGGACGAGCAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS-3UTR CAA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAACCTCCTCAGGGGATTaGCCCTCTACCTCTCGAGCT +
Preference number: 5 (lower is better)
Translates to: MLITVCSNTNKPRLNRKETSSGD*PSTSRA
Trigger: AGCTCGAGAGGTAGAGGGCAAATCCCCTGAGGAGGT...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGCTCTTCATCTTCTTCTaGCTCTGTGCGCCTATGGCG +
Preference number: 5 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKLFIFF*LCAPMA
Trigger: CGCCATAGGCGCACAGAGCAAGAAGAAGATGAAGAG...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS CCA 90 bp GTTCTTTCCTTTGCTGGTTCCATACTGAATGCGCAACTGATGAAATaGAGCCTTGTATCTTGCAATTTTGGCATCCAGGGCTTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: VLSFAGSILNAQLMK*SLVSCNFGIQGFLD
Trigger: ATCAAGAAAGCCCTGGATGCCAAAATTGCAAGATACAAGGCTCCATTTCATCAGTTGCGCATTCAGTATGGAACCAGCAAAGGAAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS-3UTR CAA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAACATTTGGCTGTTTaGGAGGCCGTGGAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKEHLAV*EAVEPL
Trigger: CAAAGGCTCCACGGCCTCCAAAACAGCCAAATGTTC...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAGAACATTTGGCTGTTTaGGAGGCCGTGGAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEEHLAV*EAVEPL
Trigger: CAAAGGCTCCACGGCCTCCAAAACAGCCAAATGTTC...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATCTCTTCATCTTCTTCTaGCTCTGTGCGCCTATGGCG +
Preference number: 5 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNLFIFF*LCAPMA
Trigger: CGCCATAGGCGCACAGAGCAAGAAGAAGATGAAGAG...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GAAACAGATTTAATGTTCTGCTCCAATATGCACATTTTAAATGGCCCAACAATGCTCTTCATCTTCTTCTaGCTCTGTGCGCCTATGGCG +
Preference number: 5 (lower is better)
Translates to: ETDLMFCSNMHILNGPTMLFIFF*LCAPMA
Trigger: CGCCATAGGCGCACAGAGCAAGAAGAAGATGAAGAG...CATTGTTGGGCCATTTAAAATGTGCATATTGGAGCAGAACATTAAATCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371122.8
CDS-3UTR CAA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAGCAGCTCTGGCATCCTaGTCTCCGACAAAACAAATG +
Preference number: 5 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEAALAS*SPTKQM
Trigger: CATTTGTTTTGTCGGAGACAAGGATGCCAGAGCTGC...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAGCAGCTCTGGCATCCTaGTCTCCGACAAAACAAATG +
Preference number: 5 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEAALAS*SPTKQM
Trigger: CATTTGTTTTGTCGGAGACAAGGATGCCAGAGCTGC...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATGAACATTTGGCTGTTTaGGAGGCCGTGGAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNEHLAV*EAVEPL
Trigger: CAAAGGCTCCACGGCCTCCAAAACAGCCAAATGTTC...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAGAGCCAGAGCTGGATTaGGGATATCAGGATTCCTTG +
Preference number: 5 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEEPELD*GYQDSL
Trigger: CAAGGAATCCTGATATCCCAAATCCAGCTCTGGCTC...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGATGGAGCCTTGTATCTaGCAATTTTGGCATCCAGGG +
Preference number: 5 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKMEPCI*QFWHPG
Trigger: CCCTGGATGCCAAAATTGCAAGATACAAGGCTCCAT...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS CCA 90 bp TTTAATTACCATCTCATAAGAAGTAACGCAAACATCCCACTCTCCTaGCATCATTTCATCACGAATAAAAGCAGCTCTGGCATCCTTGTC +
Preference number: 5 (lower is better)
Translates to: FNYHLIRSNANIPLS*HHFITNKSSSGILV
Trigger: GACAAGGATGCCAGAGCTGCTTTTATTCGTGATGAAATGATGCCAGGAGAGTGGGATGTTTGCGTTACTTCTTATGAGATGGTAATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS-3UTR CAA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAATTCTTCATGCGGGGTTaGTCCATCCAGTCGACAATA +
Preference number: 5 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKFFMRG*SIQSTI
Trigger: TATTGTCGACTGGATGGACAAACCCCGCATGAAGAA...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAATTCTTCATGCGGGGTTaGTCCATCCAGTCGACAATA +
Preference number: 5 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEFFMRG*SIQSTI
Trigger: TATTGTCGACTGGATGGACAAACCCCGCATGAAGAA...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGCAGCTTGTTAGACTGTaGGTCAATGAGTCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKQLVRL*VNESSL
Trigger: CAAGGAAGACTCATTGACCAACAGTCTAACAAGCTG...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGTCCTCTTTTGCCAGCTaGTTAGACTGTTGGTCAATG +
Preference number: 5 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKSSFAS*LDCWSM
Trigger: CATTGACCAACAGTCTAACAAGCTGGCAAAAGAGGA...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAGACTCTCCCATTTTTaGCAGGCGTTCATTCATCTC +
Preference number: 5 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKRLSHF*QAFIHL
Trigger: GAGATGAATGAACGCCTGCAAAAAATGGGAGAGTCT...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAATGGAGCCTTGTATCTaGCAATTTTGGCATCCAGGG +
Preference number: 5 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKMEPCI*QFWHPG
Trigger: CCCTGGATGCCAAAATTGCAAGATACAAGGCTCCAT...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAATGGAGCCTTGTATCTaGCAATTTTGGCATCCAGGG +
Preference number: 5 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEMEPCI*QFWHPG
Trigger: CCCTGGATGCCAAAATTGCAAGATACAAGGCTCCAT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAATGTTCAGTGGAGATGTaGGAGATTTCTGTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: VCSNTNKPRLNRKESNKECSVEM*EISVLK
Trigger: CTTCAGCACAGAAATCTCCAACATCTCCACTGAACA...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAAAGCGGTTAGTCGACTaGAACTCACGAACAATCTCT +
Preference number: 5 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEKRLVD*NSRTIS
Trigger: AGAGATTGTTCGTGAGTTCAAGTCGACTAACCGCTT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAAAGCGGTTAGTCGACTaGAACTCACGAACAATCTCT +
Preference number: 5 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKKRLVD*NSRTIS
Trigger: AGAGATTGTTCGTGAGTTCAAGTCGACTAACCGCTT...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAATGTATACCATTCTCGTaGCATCTTACTCAGCCCCAA +
Preference number: 5 (lower is better)
Translates to: VCSNTNKPRLNRKESNKECIPFS*HLTQPQ
Trigger: TTGGGGCTGAGTAAGATGCAACGAGAATGGTATACA...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAATGTATACCATTCTCGTaGCATCTTACTCAGCCCCAA +
Preference number: 5 (lower is better)
Translates to: MLITVCSNTNKPRLNRKECIPFS*HLTQPQ
Trigger: TTGGGGCTGAGTAAGATGCAACGAGAATGGTATACA...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAATGTATACCATTCTCGTaGCATCTTACTCAGCCCCAA +
Preference number: 5 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKCIPFS*HLTQPQ
Trigger: TTGGGGCTGAGTAAGATGCAACGAGAATGGTATACA...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGCGCATCTTGTCCATCTaGCCAGAAGAGTTTAAAACA +
Preference number: 5 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKRILSI*PEEFKT
Trigger: TGTTTTAAACTCTTCTGGCAAGATGGACAAGATGCG...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAATTTAAGAGTCGCATCTaGTCCATCTTGCCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEFKSRI*SILPEE
Trigger: CTCTTCTGGCAAGATGGACAAGATGCGACTCTTAAA...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAATTTAAGAGTCGCATCTaGTCCATCTTGCCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKFKSRI*SILPEE
Trigger: CTCTTCTGGCAAGATGGACAAGATGCGACTCTTAAA...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAACTCTATTGCTTCCCTTaGACCCAGAAATTCCACTTC +
Preference number: 5 (lower is better)
Translates to: MLITVCSNTNKPRLNRKELYCFP*TQKFHF
Trigger: GAAGTGGAATTTCTGGGTCAAAGGGAAGCAATAGAG...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371121.5
ENST00000371122.8
CDS-3UTR CAA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAACAGCTTGTTAGACTGTaGGTCAATGAGTCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKQLVRL*VNESSL
Trigger: CAAGGAAGACTCATTGACCAACAGTCTAACAAGCTG...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAATCCTCTTTTGCCAGCTaGTTAGACTGTTGGTCAATG +
Preference number: 5 (lower is better)
Translates to: VCSNTNKPRLNRKESNKESSFAS*LDCWSM
Trigger: CATTGACCAACAGTCTAACAAGCTGGCAAAAGAGGA...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp CAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGGCGTGGTGGGAAAAATaGAAAATCCTGAACATTTGG +
Preference number: 5 (lower is better)
Translates to: QYAVTQTSPDSIEKKATKAWWEK*KILNIW
Trigger: CCAAATGTTCAGGATTTTCAATTTTTCCCACCACGC...CTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGATACTGATCCTTCGTaGAATTCTTGCTTCTCCACG +
Preference number: 5 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKDTDPS*NSCFST
Trigger: CGTGGAGAAGCAAGAATTCAACGAAGGATCAGTATC...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATTGTTCAGTGGAGATGTaGGAGATTTCTGTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNCSVEM*EISVLK
Trigger: CTTCAGCACAGAAATCTCCAACATCTCCACTGAACA...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAATCAGGCAATAAAAAGTaGAGTAAGGCCCACAGTTCA +
Preference number: 5 (lower is better)
Translates to: VCSNTNKPRLNRKESNKESGNKK*SKAHSS
Trigger: TGAACTGTGGGCCTTACTCAACTTTTTATTGCCTGA...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAATCAGGCAATAAAAAGTaGAGTAAGGCCCACAGTTCA +
Preference number: 5 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKSGNKK*SKAHSS
Trigger: TGAACTGTGGGCCTTACTCAACTTTTTATTGCCTGA...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAACGCATCTTGTCCATCTaGCCAGAAGAGTTTAAAACA +
Preference number: 5 (lower is better)
Translates to: MLITVCSNTNKPRLNRKERILSI*PEEFKT
Trigger: TGTTTTAAACTCTTCTGGCAAGATGGACAAGATGCG...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAACGCATCTTGTCCATCTaGCCAGAAGAGTTTAAAACA +
Preference number: 5 (lower is better)
Translates to: VCSNTNKPRLNRKESNKERILSI*PEEFKT
Trigger: TGTTTTAAACTCTTCTGGCAAGATGGACAAGATGCG...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAACCCTGTTCTTTGAGTTaGGCCAATAGTTTATCCAGA +
Preference number: 5 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKPCSLS*ANSLSR
Trigger: TCTGGATAAACTATTGGCCAAACTCAAAGAACAGGG...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAACCCTGTTCTTTGAGTTaGGCCAATAGTTTATCCAGA +
Preference number: 5 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEPCSLS*ANSLSR
Trigger: TCTGGATAAACTATTGGCCAAACTCAAAGAACAGGG...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATCAGCTTGTTAGACTGTaGGTCAATGAGTCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNQLVRL*VNESSL
Trigger: CAAGGAAGACTCATTGACCAACAGTCTAACAAGCTG...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATAGACTCTCCCATTTTTaGCAGGCGTTCATTCATCTC +
Preference number: 5 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNRLSHF*QAFIHL
Trigger: GAGATGAATGAACGCCTGCAAAAAATGGGAGAGTCT...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGCGTGGTGGGAAAAATaGAAAATCCTGAACATTTGG +
Preference number: 5 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKAWWEK*KILNIW
Trigger: CCAAATGTTCAGGATTTTCAATTTTTCCCACCACGC...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAGGATATCAGGATTCCTaGGAACCTTATAGCCTATTG +
Preference number: 5 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEGYQDS*EPYSLL
Trigger: CAATAGGCTATAAGGTTCCAAGGAATCCTGATATCC...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAGGATATCAGGATTCCTaGGAACCTTATAGCCTATTG +
Preference number: 5 (lower is better)
Translates to: MLITVCSNTNKPRLNRKEGYQDS*EPYSLL
Trigger: CAATAGGCTATAAGGTTCCAAGGAATCCTGATATCC...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATGATACTGATCCTTCGTaGAATTCTTGCTTCTCCACG +
Preference number: 5 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNDTDPS*NSCFST
Trigger: CGTGGAGAAGCAAGAATTCAACGAAGGATCAGTATC...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAATTGTATCTTGCAATTTaGGCATCCAGGGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKLYLAI*ASRAFL
Trigger: CAAGAAAGCCCTGGATGCCAAAATTGCAAGATACAA...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GAAACAGATTTAATGTTCTGCTCCAATATGCACATTTTAAATGGCCCAACAATGTCAGGCAATAAAAAGTaGAGTAAGGCCCACAGTTCA +
Preference number: 5 (lower is better)
Translates to: ETDLMFCSNMHILNGPTMSGNKK*SKAHSS
Trigger: TGAACTGTGGGCCTTACTCAACTTTTTATTGCCTGA...CATTGTTGGGCCATTTAAAATGTGCATATTGGAGCAGAACATTAAATCTGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371122.8
CDS-3UTR CAA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAACCATTTTACCACTGTaGCTGACAATATGCTCATCA +
Preference number: 5 (lower is better)
Translates to: VCSNTNKPRLNRKESNKETILPL*LTICSS
Trigger: TGATGAGCATATTGTCAGCAACAGTGGTAAAATGGT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAACCATTTTACCACTGTaGCTGACAATATGCTCATCA +
Preference number: 5 (lower is better)
Translates to: MLITVCSNTNKPRLNRKETILPL*LTICSS
Trigger: TGATGAGCATATTGTCAGCAACAGTGGTAAAATGGT...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATCCCTGTTCTTTGAGTTaGGCCAATAGTTTATCCAGA +
Preference number: 5 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNPCSLS*ANSLSR
Trigger: TCTGGATAAACTATTGGCCAAACTCAAAGAACAGGG...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAACTTGAACCCTGTTCTTaGAGTTTGGCCAATAGTTTA +
Preference number: 5 (lower is better)
Translates to: MLITVCSNTNKPRLNRKELEPCS*SLANSL
Trigger: TAAACTATTGGCCAAACTCAAAGAACAGGGTTCAAG...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAACTTGAACCCTGTTCTTaGAGTTTGGCCAATAGTTTA +
Preference number: 5 (lower is better)
Translates to: VCSNTNKPRLNRKESNKELEPCS*SLANSL
Trigger: TAAACTATTGGCCAAACTCAAAGAACAGGGTTCAAG...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATGCGTGGTGGGAAAAATaGAAAATCCTGAACATTTGG +
Preference number: 5 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNAWWEK*KILNIW
Trigger: CCAAATGTTCAGGATTTTCAATTTTTCCCACCACGC...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATGGATATCAGGATTCCTaGGAACCTTATAGCCTATTG +
Preference number: 5 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNGYQDS*EPYSLL
Trigger: CAATAGGCTATAAGGTTCCAAGGAATCCTGATATCC...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAACCAGTTTGTGAAACCTaGTGTGAGAAGTTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKPVCET*CEKFFL
Trigger: AAGGAAAAACTTCTCACACAAGGTTTCACAAACTGG...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAACCAGTTTGTGAAACCTaGTGTGAGAAGTTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEPVCET*CEKFFL
Trigger: AAGGAAAAACTTCTCACACAAGGTTTCACAAACTGG...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAATCCTTCGTTGAATTCTaGCTTCTCCACGTTCAATTT +
Preference number: 5 (lower is better)
Translates to: MLITVCSNTNKPRLNRKESFVEF*LLHVQF
Trigger: AAATTGAACGTGGAGAAGCAAGAATTCAACGAAGGA...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAATCCTTCGTTGAATTCTaGCTTCTCCACGTTCAATTT +
Preference number: 5 (lower is better)
Translates to: VCSNTNKPRLNRKESNKESFVEF*LLHVQF
Trigger: AAATTGAACGTGGAGAAGCAAGAATTCAACGAAGGA...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATTTGTATCTTGCAATTTaGGCATCCAGGGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNLYLAI*ASRAFL
Trigger: CAAGAAAGCCCTGGATGCCAAAATTGCAAGATACAA...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAAAAATTCAAATCTCTTaGCTCGGTCGGCTTTCATTT +
Preference number: 5 (lower is better)
Translates to: TVCSNTNKPRLNRKESNKKIQIS*LGRLSF
Trigger: AAATGAAAGCCGACCGAGCAAAGAGATTTGAATTTT...TTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp ATGCTAATCACAGTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAACTTTCATCAGGATTTTaGTATACCATTCTCGTTGCA +
Preference number: 5 (lower is better)
Translates to: MLITVCSNTNKPRLNRKELSSGF*YTILVA
Trigger: TGCAACGAGAATGGTATACAAAAATCCTGATGAAAG...TTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATACTGTGATTAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAACTTTCATCAGGATTTTaGTATACCATTCTCGTTGCA +
Preference number: 5 (lower is better)
Translates to: VCSNTNKPRLNRKESNKELSSGF*YTILVA
Trigger: TGCAACGAGAATGGTATACAAAAATCCTGATGAAAG...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATCTTGAACCCTGTTCTTaGAGTTTGGCCAATAGTTTA +
Preference number: 5 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNLEPCS*SLANSL
Trigger: TAAACTATTGGCCAAACTCAAAGAACAGGGTTCAAG...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GTATGCAGTAACACAAACAAGCCCAGACTCAATAGAAAAGAAAGCAACAAAGAAATGTCCTGTAATTCATaGCAACGTTCCCAAAATACA +
Preference number: 5 (lower is better)
Translates to: VCSNTNKPRLNRKESNKEMSCNS*QRSQNT
Trigger: TGTATTTTGGGAACGTTGCAATGAATTACAGGACAT...TTCTTTGTTGCTTTCTTTTCTATTGAGTCTGGGCTTGTTTGTGTTACTGCATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GAAACAGATTTAATGTTCTGCTCCAATATGCACATTTTAAATGGCCCAACAATGTCCTTCGTTGAATTCTaGCTTCTCCACGTTCAATTT +
Preference number: 5 (lower is better)
Translates to: ETDLMFCSNMHILNGPTMSFVEF*LLHVQF
Trigger: AAATTGAACGTGGAGAAGCAAGAATTCAACGAAGGA...CATTGTTGGGCCATTTAAAATGTGCATATTGGAGCAGAACATTAAATCTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371122.8
CDS-3UTR CAA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATAAAATTCAAATCTCTTaGCTCGGTCGGCTTTCATTT +
Preference number: 5 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNKIQIS*LGRLSF
Trigger: AAATGAAAGCCGACCGAGCAAAGAGATTTGAATTTT...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS-3UTR CAA 90 bp GAAACAGATTTAATGTTCTGCTCCAATATGCACATTTTAAATGGCCCAACAATGAAAATTCAAATCTCTTaGCTCGGTCGGCTTTCATTT +
Preference number: 5 (lower is better)
Translates to: ETDLMFCSNMHILNGPTMKIQIS*LGRLSF
Trigger: AAATGAAAGCCGACCGAGCAAAGAGATTTGAATTTT...CATTGTTGGGCCATTTAAAATGTGCATATTGGAGCAGAACATTAAATCTGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371122.8
CDS-3UTR CAA 90 bp TCAAAACCAAAGAGATTTTTCTTAGAGTACCATGAATACACTGGAACTGGCAATATGTCCTGTAATTCATaGCAACGTTCCCAAAATACA +
Preference number: 5 (lower is better)
Translates to: SKPKRFFLEYHEYTGTGNMSCNS*QRSQNT
Trigger: TGTATTTTGGGAACGTTGCAATGAATTACAGGACAT...ATTGCCAGTTCCAGTGTATTCATGGTACTCTAAGAAAAATCTCTTTGGTTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
CDS GCA 72 bp GGCGGTCGCATCCGCGGCTGCCACGGTGGCTGCCACTaGGGCAGTGTCCTGCTCCATGCCGTGGGAGCGGGA +
Preference number: 6 (lower is better)
Translates to: GGRIRGCHGGCH*GSVLLHAVGAG
Trigger: TCCCGCTCCCACGGCATGGAGCAGGACACTGCCGCAGTGGCAGCCACCGTGGCAGCCGCGGATGCGACCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS GCA 72 bp GATAGTGGCGGTCGCATCCGCGGCTGCCACGGTGGCTaGCACTGCGGCAGTGTCCTGCTCCATGCCGTGGGA +
Preference number: 6 (lower is better)
Translates to: DSGGRIRGCHGG*HCGSVLLHAVG
Trigger: TCCCACGGCATGGAGCAGGACACTGCCGCAGTGGCAGCCACCGTGGCAGCCGCGGATGCGACCGCCACTATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS CCA 72 bp GTGGCTGCCACTGCGGCAGTGTCCTGCTCCATGCCGTaGGAGCGGGAACGAGTAGGGGGACAAGGCAGGGGA +
Preference number: 6 (lower is better)
Translates to: VAATAAVSCSMP*ERERVGGQGRG
Trigger: TCCCCTGCCTTGTCCCCCTACTCGTTCCCGCTCCCACGGCATGGAGCAGGACACTGCCGCAGTGGCAGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS GCA 72 bp CTCTATGACCACGATAGTGGCGGTCGCATCCGCGGCTaGCACGGTGGCTGCCACTGCGGCAGTGTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: LYDHDSGGRIRG*HGGCHCGSVLL
Trigger: GAGCAGGACACTGCCGCAGTGGCAGCCACCGTGGCAGCCGCGGATGCGACCGCCACTATCGTGGTCATAGAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS CAA 72 bp AGCCTCTATTGCTTCCTCTCTTTCTTCATGCGGGGTTaGTCCATCCAGTCGACAATACTCATAACCACGCCA +
Preference number: 6 (lower is better)
Translates to: SLYCFLSFFMRG*SIQSTILITTP
Trigger: TGGCGTGGTTATGAGTATTGTCGACTGGATGGACAAACCCCGCATGAAGAAAGAGAGGAAGCAATAGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371123.5
ENST00000617310.4
CDS CAA 90 bp CGTTCCCAAAATACAGCTGAATACTCCATGACCTCCTCAGGGGATTaGCCCTCTACCTCTCGAGCTATGTTATCAATGTCATCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: RSQNTAEYSMTSSGD*PSTSRAMLSMSSLP
Trigger: TGGAAGAGATGACATTGATAACATAGCTCGAGAGGTAGAGGGCAAATCCCCTGAGGAGGTCATGGAGTATTCAGCTGTATTTTGGGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS CCA 72 bp TTTGCTGGTTCCATACTGAATGCGCAACTGATGAAATaGAGCCTTGTATCTTGCAATTTTGGCATCCAGGGC +
Preference number: 6 (lower is better)
Translates to: FAGSILNAQLMK*SLVSCNFGIQG
Trigger: GCCCTGGATGCCAAAATTGCAAGATACAAGGCTCCATTTCATCAGTTGCGCATTCAGTATGGAACCAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS TCA 72 bp TCAGTGATGAGACGGAATACACGTACTGGTTTCTTCTaGCCAATACGATGTGCTCGATCCATAGCTTGTAGA +
Preference number: 6 (lower is better)
Translates to: SVMRRNTRTGFF*PIRCARSIACR
Trigger: TCTACAAGCTATGGATCGAGCACATCGTATTGGTCAGAAGAAACCAGTACGTGTATTCCGTCTCATCACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS CCA 72 bp AACAGTGTTGTCAGTGATGAGACGGAATACACGTACTaGTTTCTTCTGACCAATACGATGTGCTCGATCCAT +
Preference number: 6 (lower is better)
Translates to: NSVVSDETEYTY*FLLTNTMCSIH
Trigger: ATGGATCGAGCACATCGTATTGGTCAGAAGAAACCAGTACGTGTATTCCGTCTCATCACTGACAACACTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS CAA 72 bp ATCTCAGCTCTTTCTACAATCCTCTCTTCAACAGTGTaGTCAGTGATGAGACGGAATACACGTACTGGTTTC +
Preference number: 6 (lower is better)
Translates to: ISALSTILSSTV*SVMRRNTRTGF
Trigger: GAAACCAGTACGTGTATTCCGTCTCATCACTGACAACACTGTTGAAGAGAGGATTGTAGAAAGAGCTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS GCA 72 bp CAGTATAGTTCTTTCCTTTGCTGGTTCCATACTGAATaGGCAACTGATGAAATGGAGCCTTGTATCTTGCAA +
Preference number: 6 (lower is better)
Translates to: QYSSFLCWFHTE*ATDEMEPCILQ
Trigger: TTGCAAGATACAAGGCTCCATTTCATCAGTTGCGCATTCAGTATGGAACCAGCAAAGGAAAGAACTATACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS CCA 72 bp TCATCTGTCAACTCACTCTCTTTAGAAGCAAAAACATaGGTGGCTCCATGCCGTATCATTTGTAACATTTCC +
Preference number: 6 (lower is better)
Translates to: SSVNSLSLEAKT*VAPCRIICNIS
Trigger: GGAAATGTTACAAATGATACGGCATGGAGCCACCCATGTTTTTGCTTCTAAAGAGAGTGAGTTGACAGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS CAA 72 bp AAAGGTGTTCCAGTTAGGAGCAAGCGGTTAGTCGACTaGAACTCACGAACAATCTCTGAAAGCTTAGATTTT +
Preference number: 6 (lower is better)
Translates to: KGVPVRSKRLVD*NSRTISESLDF
Trigger: AAAATCTAAGCTTTCAGAGATTGTTCGTGAGTTCAAGTCGACTAACCGCTTGCTCCTAACTGGAACACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS CAA 90 bp TTAATTCCGAGACCTCCAGCCCTGGTACTTAGCATAAAGATGAATTaGCTACTATTAGGAGCATTAAAAGCCTCTATTGCTTCCTCTCTT +
Preference number: 6 (lower is better)
Translates to: LIPRPPALVLSIKMN*LLLGALKASIASSL
Trigger: AAGAGAGGAAGCAATAGAGGCTTTTAATGCTCCTAATAGTAGCAAATTCATCTTTATGCTAAGTACCAGGGCTGGAGGTCTCGGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371123.5
ENST00000617310.4
CDS CAA 72 bp TCATCTGCAGAATTAAAGACATCAGGCAATAAAAAGTaGAGTAAGGCCCACAGTTCATGCAGGTTATTCTGC +
Preference number: 6 (lower is better)
Translates to: SSAELKTSGNKK*SKAHSSCRLFC
Trigger: GCAGAATAACCTGCATGAACTGTGGGCCTTACTCAACTTTTTATTGCCTGATGTCTTTAATTCTGCAGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS CAA 72 bp AGACCTCCAGCCCTGGTACTTAGCATAAAGATGAATTaGCTACTATTAGGAGCATTAAAAGCCTCTATTGCT +
Preference number: 6 (lower is better)
Translates to: RPPALVLSIKMN*LLLGALKASIA
Trigger: AGCAATAGAGGCTTTTAATGCTCCTAATAGTAGCAAATTCATCTTTATGCTAAGTACCAGGGCTGGAGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS CAA 90 bp TTATTCTGCAAAGGTGTTCCAGTTAGGAGCAAGCGGTTAGTCGACTaGAACTCACGAACAATCTCTGAAAGCTTAGATTTTTCATTCTTT +
Preference number: 6 (lower is better)
Translates to: LFCKGVPVRSKRLVD*NSRTISESLDFSFF
Trigger: AAAGAATGAAAAATCTAAGCTTTCAGAGATTGTTCGTGAGTTCAAGTCGACTAACCGCTTGCTCCTAACTGGAACACCTTTGCAGAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS CAA 90 bp GAATCAAAGTCATCTGCAGAATTAAAGACATCAGGCAATAAAAAGTaGAGTAAGGCCCACAGTTCATGCAGGTTATTCTGCAAAGGTGTT +
Preference number: 6 (lower is better)
Translates to: ESKSSAELKTSGNKK*SKAHSSCRLFCKGV
Trigger: AACACCTTTGCAGAATAACCTGCATGAACTGTGGGCCTTACTCAACTTTTTATTGCCTGATGTCTTTAATTCTGCAGATGACTTTGATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS CAA 72 bp CTGAAAATGAGAACCCTTGAACCCTGTTCTTTGAGTTaGGCCAATAGTTTATCCAGAACTACCATTTTACCA +
Preference number: 6 (lower is better)
Translates to: LKMRTLEPCSLS*ANSLSRTTILP
Trigger: TGGTAAAATGGTAGTTCTGGATAAACTATTGGCCAAACTCAAAGAACAGGGTTCAAGGGTTCTCATTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS CAA 90 bp TTTCGAAGCTGCATCAGAATGTTTAAGAGTCGCATCTTGTCCATCTaGCCAGAAGAGTTTAAAACATCAATATCTTTCATCAGGATTTTT +
Preference number: 6 (lower is better)
Translates to: FRSCIRMFKSRILSI*PEEFKTSISFIRIF
Trigger: AAAAATCCTGATGAAAGATATTGATGTTTTAAACTCTTCTGGCAAGATGGACAAGATGCGACTCTTAAACATTCTGATGCAGCTTCGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS CCA 72 bp TGTAACATTTCCTCTTTTGCCAGCTTGTTAGACTGTTaGTCAATGAGTCTTCCTTGTTGTATAACAATTGAA +
Preference number: 6 (lower is better)
Translates to: CNISSFASLLDC*SMSLPCCITIE
Trigger: TTCAATTGTTATACAACAAGGAAGACTCATTGACCAACAGTCTAACAAGCTGGCAAAAGAGGAAATGTTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371121.5
ENST00000371122.8
ENST00000371123.5
ENST00000617310.4
CDS CCA 72 bp ATGTTGCAACAGAAATCTACTTTAGGACATAAAAACTaGCCTTGTACAGTTTTACCTTTGGAATCTTTGGCT +
Preference number: 6 (lower is better)
Translates to: MLQQKSTLGHKN*PCTVLPLESLA
Trigger: AGCCAAAGATTCCAAAGGTAAAACTGTACAAGGCCAGTTTTTATGTCCTAAAGTAGATTTCTGTTGCAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617310.4