RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000084070

Ensembl transcript IDs: ENST00000372708.5, ENST00000372718.8, ENST00000435168.6, ENST00000487871.1, ENST00000539317.2, ENST00000614549.4

Found 480 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGGAAAGCTGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTaGGGAAACAGAGCACCCTGGATACACAGGCATGAAAGAGTGATC +
Preference number: 1 (lower is better)
Translates to: RGKLSRPSASYTWER*GNRAPWIHRHERVI
Trigger: GATCACTCTTTCATGCCTGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACAGCTTTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR GCA 90 bp GGGACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTaGCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAG +
Preference number: 1 (lower is better)
Translates to: GTQRCAHFSHSLSAF*QQLLRCWCQERTGE
Trigger: CTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR GCA 90 bp GAGGGAAGGGACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTaGCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGAC +
Preference number: 1 (lower is better)
Translates to: EGRDSKVCTLLPQFK*LLPTTSKVLVPGED
Trigger: GTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTCCCTTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR GCA 90 bp GAGTCTGACAGGAGCTTTAACCTTGAGGGAAGGGACTCAAAGGTGTaGACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCT +
Preference number: 1 (lower is better)
Translates to: ESDRSFNLEGRDSKV*TLLPQFKCLLPTTS
Trigger: AGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTCCCTTCCCTCAAGGTTAAAGCTCCTGTCAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR TCA 90 bp AAGCTTTCCCCTGTTTGCCTAATATACAACACCCACAGACCCTTCTaGGAGTCTGACAGGAGCTTTAACCTTGAGGGAAGGGACTCAAAG +
Preference number: 1 (lower is better)
Translates to: KLSPVCLIYNTHRPF*ESDRSFNLEGRDSK
Trigger: CTTTGAGTCCCTTCCCTCAAGGTTAAAGCTCCTGTCAGACTCTCAGAAGGGTCTGTGGGTGTTGTATATTAGGCAAACAGGGGAAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGTGCCAGGAGAGGACTaGGGAGGACGTTGGGATGGC +
Preference number: 2 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPVPGED*GGRWDG
Trigger: GCCATCCCAACGTCCTCCCCAGTCCTCTCCTGGCAC...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATGTGCCAGGAGAGGACTaGGGAGGACGTTGGGATGGC +
Preference number: 2 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDVPGED*GGRWDG
Trigger: GCCATCCCAACGTCCTCCCCAGTCCTCTCCTGGCAC...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR TCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGGGAGAGCGAGGGCTaGAGAGAATGGCAGCCATAC +
Preference number: 2 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPGESEG*REWQPY
Trigger: GTATGGCTGCCATTCTCTTCAGCCCTCGCTCTCCCC...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTCAGATGGGGAGAGGGTaGGAGGCGGAACACACACTC +
Preference number: 2 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPQMGRG*EAEHTL
Trigger: GAGTGTGTGTTCCGCCTCCCACCCTCTCCCCATCTG...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTAATACCCAGAGCAGATaGGGAGAGGGTGGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPNTQSR*GEGGRR
Trigger: CCGCCTCCCACCCTCTCCCCATCTGCTCTGGGTATT...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR TCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACGGGCTAGGGTCAAACTaGCCCAGGACCCAGGGAGTA +
Preference number: 2 (lower is better)
Translates to: PSASYTWERWGNRAPWIHGLGSN*PRTQGV
Trigger: TACTCCCTGGGTCCTGGGTCAGTTTGACCCTAGCCC...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATTGTTTGGGAAGTGGCTaGGCAGGATGCCAAACCCCA +
Preference number: 2 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDCLGSG*AGCQTP
Trigger: TGGGGTTTGGCATCCTGCCCAGCCACTTCCCAAACA...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATCAACTTCTAAGGTGCTaGTGCCAGGAGAGGACTGGG +
Preference number: 2 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDQLLRC*CQERTG
Trigger: CCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTG...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR TCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAGGGGAGAGCGAGGGCTaGAGAGAATGGCAGCCATAC +
Preference number: 2 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTGESEG*REWQPY
Trigger: GTATGGCTGCCATTCTCTTCAGCCCTCGCTCTCCCC...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR TCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACCCACAGACCCTTCTaGGAGTCTGACAGGAGCTTT +
Preference number: 2 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDTHRPF*ESDRSF
Trigger: AAAGCTCCTGTCAGACTCTCAGAAGGGTCTGTGGGT...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGACTGGGGAGGACGTTaGGATGGCTATGGGGCATGT +
Preference number: 2 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRDWGGR*DGYGAC
Trigger: ACATGCCCCATAGCCATCCCAACGTCCTCCCCAGTC...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACATCCCACTATAGGGGTTaGTCCTCCAGCCACGGAGCC +
Preference number: 2 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTSHYRG*SSSHGA
Trigger: GGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGGA...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR TCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGTGCTAATAAAGGCTaGCTGAAGCAGCAAGTCCTG +
Preference number: 2 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPGANKG*LKQQVL
Trigger: CAGGACTTGCTGCTTCAGTCAGCCTTTATTAGCACC...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR GCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTCAACAACTTCTAAGGTaGTGGTGCCAGGAGAGGACT +
Preference number: 2 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPQQLLR*WCQERT
Trigger: AGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTG...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACTGTTTGGGAAGTGGCTaGGCAGGATGCCAAACCCCA +
Preference number: 2 (lower is better)
Translates to: PSASYTWERWGNRAPWIHCLGSG*AGCQTP
Trigger: TGGGGTTTGGCATCCTGCCCAGCCACTTCCCAAACA...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACGGGAGGACGTTGGGATaGCTATGGGGCATGTACAAC +
Preference number: 2 (lower is better)
Translates to: PSASYTWERWGNRAPWIHGRTLG*LWGMYN
Trigger: GTTGTACATGCCCCATAGCCATCCCAACGTCCTCCC...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGAGGACGTTGGGATaGCTATGGGGCATGTACAAC +
Preference number: 2 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRGRTLG*LWGMYN
Trigger: GTTGTACATGCCCCATAGCCATCCCAACGTCCTCCC...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAGACTGGGGAGGACGTTaGGATGGCTATGGGGCATGT +
Preference number: 2 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTDWGGR*DGYGAC
Trigger: ACATGCCCCATAGCCATCCCAACGTCCTCCCCAGTC...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGAGTGCCAGGAGAGGACTaGGGAGGACGTTGGGATGGC +
Preference number: 2 (lower is better)
Translates to: PWIHRHERVISRPGEGKGVPGED*GGRWDG
Trigger: GCCATCCCAACGTCCTCCCCAGTCCTCTCCTGGCAC...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGCAACTTCTAAGGTGCTaGTGCCAGGAGAGGACTGGG +
Preference number: 2 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGQLLRC*CQERTG
Trigger: CCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTG...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR TCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACACCCACAGACCCTTCTaGGAGTCTGACAGGAGCTTT +
Preference number: 2 (lower is better)
Translates to: PSASYTWERWGNRAPWIHTHRPF*ESDRSF
Trigger: AAAGCTCCTGTCAGACTCTCAGAAGGGTCTGTGGGT...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGACAGATGGGGAGAGGGTaGGAGGCGGAACACACACTC +
Preference number: 2 (lower is better)
Translates to: PWIHRHERVISRPGEGKGQMGRG*EAEHTL
Trigger: GAGTGTGTGTTCCGCCTCCCACCCTCTCCCCATCTG...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGAAATACCCAGAGCAGATaGGGAGAGGGTGGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: PWIHRHERVISRPGEGKGNTQSR*GEGGRR
Trigger: CCGCCTCCCACCCTCTCCCCATCTGCTCTGGGTATT...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR TCA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGTGCTAATAAAGGCTaGCTGAAGCAGCAAGTCCTG +
Preference number: 2 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRGANKG*LKQQVL
Trigger: CAGGACTTGCTGCTTCAGTCAGCCTTTATTAGCACC...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGTGTTTGGGAAGTGGCTaGGCAGGATGCCAAACCCCA +
Preference number: 2 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTCLGSG*AGCQTP
Trigger: TGGGGTTTGGCATCCTGCCCAGCCACTTCCCAAACA...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGTTCATGTTTGGGAAGTaGCTGGGCAGGATGCCAAAC +
Preference number: 2 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGFMFGK*LGRMPN
Trigger: GTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAA...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTACGTTGGGATGGCTATaGGGCATGTACAACATAAAG +
Preference number: 2 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPTLGWL*GMYNIK
Trigger: CTTTATGTTGTACATGCCCCATAGCCATCCCAACGT...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAAGAGGTCTTCATGTTTaGGAAGTGGCTGGGCAGGAT +
Preference number: 2 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTRGLHV*EVAGQD
Trigger: ATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCT...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR GCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGAAGTGGCTGGGCAGGATaGCAAACCCCAAATGACTTA +
Preference number: 2 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGSGWAG*QTPNDL
Trigger: TAAGTCATTTGGGGTTTGGCATCCTGCCCAGCCACT...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR GCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGCAACAACTTCTAAGGTaGTGGTGCCAGGAGAGGACT +
Preference number: 2 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTQQLLR*WCQERT
Trigger: AGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTG...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR GCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACCTCCCACAGTTTAAGTaGCTTCTGCCAACAACTTCT +
Preference number: 2 (lower is better)
Translates to: PSASYTWERWGNRAPWIHLPQFK*LLPTTS
Trigger: AGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGAG...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR GCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACGTACACGTTAAGCTCTaGATTCCCACTATAGGGGTT +
Preference number: 2 (lower is better)
Translates to: PSASYTWERWGNRAPWIHVHVKL*IPTIGV
Trigger: AACCCCTATAGTGGGAATGCAGAGCTTAACGTGTAC...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCGGGAGGACGTTGGGATaGCTATGGGGCATGTACAAC +
Preference number: 2 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPAGRTLG*LWGMYN
Trigger: GTTGTACATGCCCCATAGCCATCCCAACGTCCTCCC...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR TCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTGGGGAGAGCGAGGGCTaGAGAGAATGGCAGCCATAC +
Preference number: 2 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTGESEG*REWQPY
Trigger: GTATGGCTGCCATTCTCTTCAGCCCTCGCTCTCCCC...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR TCA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTGGGGAGAGCGAGGGCTaGAGAGAATGGCAGCCATAC +
Preference number: 2 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLGESEG*REWQPY
Trigger: GTATGGCTGCCATTCTCTTCAGCCCTCGCTCTCCCC...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR GCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGAAGTGGCTGGGCAGGATaGCAAACCCCAAATGACTTA +
Preference number: 2 (lower is better)
Translates to: PWIHRHERVISRPGEGKGSGWAG*QTPNDL
Trigger: TAAGTCATTTGGGGTTTGGCATCCTGCCCAGCCACT...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR GCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACACTCCCACAGTTTAAGTaGCTTCTGCCAACAACTTCT +
Preference number: 2 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTLPQFK*LLPTTS
Trigger: AGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGAG...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGAAGAGGTCTTCATGTTTaGGAAGTGGCTGGGCAGGAT +
Preference number: 2 (lower is better)
Translates to: PWIHRHERVISRPGEGKGRGLHV*EVAGQD
Trigger: ATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCT...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCTTCATGTTTGGGAAGTaGCTGGGCAGGATGCCAAAC +
Preference number: 2 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPAFMFGK*LGRMPN
Trigger: GTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAA...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGACGTTGGGATGGCTATaGGGCATGTACAACATAAAG +
Preference number: 2 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTTLGWL*GMYNIK
Trigger: CTTTATGTTGTACATGCCCCATAGCCATCCCAACGT...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR TCA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGATGCCAAACCCCAAATaGCTTATTGAGCAATTTCTA +
Preference number: 2 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRMPNPK*LIEQFL
Trigger: TAGAAATTGCTCAATAAGTCATTTGGGGTTTGGCAT...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTGGGAGGACGTTGGGATaGCTATGGGGCATGTACAAC +
Preference number: 2 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTGRTLG*LWGMYN
Trigger: GTTGTACATGCCCCATAGCCATCCCAACGTCCTCCC...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGATGTGTGTCTGTGTGTaGGATCTTCATAAAGTCTTT +
Preference number: 2 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGMCVCV*DLHKVF
Trigger: AAAGACTTTATGAAGATCCCACACACAGACACACAT...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR GCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCCTCCCACAGTTTAAGTaGCTTCTGCCAACAACTTCT +
Preference number: 2 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPALPQFK*LLPTTS
Trigger: AGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGAG...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCACGTTGGGATGGCTATaGGGCATGTACAACATAAAG +
Preference number: 2 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPATLGWL*GMYNIK
Trigger: CTTTATGTTGTACATGCCCCATAGCCATCCCAACGT...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAATGTGTGTCTGTGTGTaGGATCTTCATAAAGTCTTT +
Preference number: 2 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTMCVCV*DLHKVF
Trigger: AAAGACTTTATGAAGATCCCACACACAGACACACAT...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR TCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGCCCCAAATGACTTATTaGGCAATTTCTAAACCAAAC +
Preference number: 2 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTPQMTY*AISKPN
Trigger: GTTTGGTTTAGAAATTGCTCAATAAGTCATTTGGGG...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR GCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCAGTTTAAGTGCCTTCTaGCAACAACTTCTAAGGTGC +
Preference number: 2 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPASLSAF*QQLLRC
Trigger: GCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACT...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR TCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGAATGCCAAACCCCAAATaGCTTATTGAGCAATTTCTA +
Preference number: 2 (lower is better)
Translates to: PWIHRHERVISRPGEGKGMPNPK*LIEQFL
Trigger: TAGAAATTGCTCAATAAGTCATTTGGGGTTTGGCAT...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCATGTGTGTCTGTGTGTaGGATCTTCATAAAGTCTTT +
Preference number: 2 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPAMCVCV*DLHKVF
Trigger: AAAGACTTTATGAAGATCCCACACACAGACACACAT...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR TCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGATGCCAAACCCCAAATaGCTTATTGAGCAATTTCTA +
Preference number: 2 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQEMPNPK*LIEQFL
Trigger: TAGAAATTGCTCAATAAGTCATTTGGGGTTTGGCAT...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR TCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTATGCCAAACCCCAAATaGCTTATTGAGCAATTTCTA +
Preference number: 2 (lower is better)
Translates to: VGMAMGHVQHKATERSSCMPNPK*LIEQFL
Trigger: TAGAAATTGCTCAATAAGTCATTTGGGGTTTGGCAT...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CAA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGACTGGGGAGGACGTaGGGATGGCTATGGGGCATG +
Preference number: 3 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPGLGRT*GWLWGM
Trigger: CATGCCCCATAGCCATCCCAACGTCCTCCCCAGTCC...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CAA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGCTCATAGGAGGGGGCTaGCCTCACCCCAGGGCTAGG +
Preference number: 3 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTLIGGG*PHPRAR
Trigger: CCTAGCCCTGGGGTGAGGCAAGCCCCCTCCTATGAG...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR CCA 72 bp CTGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTaGGGAAACAGAGCACCCTGGATACACAGGCATGAA +
Preference number: 3 (lower is better)
Translates to: LSRPSASYTWER*GNRAPWIHRHE
Trigger: TTCATGCCTGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR CCA 72 bp AGAGGAAAGCTGTCCCGGCCCTCTGCCTCGTACACCTaGGAACGGTGGGGAAACAGAGCACCCTGGATACAC +
Preference number: 3 (lower is better)
Translates to: RGKLSRPSASYT*ERWGNRAPWIH
Trigger: GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACAGCTTTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CAA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGACTCATAGGAGGGGGCTaGCCTCACCCCAGGGCTAGG +
Preference number: 3 (lower is better)
Translates to: PWIHRHERVISRPGEGKGLIGGG*PHPRAR
Trigger: CCTAGCCCTGGGGTGAGGCAAGCCCCCTCCTATGAG...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CAA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACGAGAGGTCTTCATGTTaGGGAAGTGGCTGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: PSASYTWERWGNRAPWIHERSSC*GSGWAG
Trigger: TCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTC...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CAA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTACAGGAGCTTTAACCTaGAGGGAAGGGACTCAAAGG +
Preference number: 3 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPTGALT*REGTQR
Trigger: CCTTTGAGTCCCTTCCCTCAAGGTTAAAGCTCCTGT...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CAA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAGAGAGGTCTTCATGTTaGGGAAGTGGCTGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTERSSC*GSGWAG
Trigger: TCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTC...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CAA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCGGACTGGGGAGGACGTaGGGATGGCTATGGGGCATG +
Preference number: 3 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPAGLGRT*GWLWGM
Trigger: CATGCCCCATAGCCATCCCAACGTCCTCCCCAGTCC...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR CCA 72 bp CCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTaGGGAGGACGTTGGGATGGCTATGGGGCATGTACA +
Preference number: 3 (lower is better)
Translates to: PTTSKVLVPGED*GGRWDGYGACT
Trigger: TGTACATGCCCCATAGCCATCCCAACGTCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR GCA 72 bp ACTCACGCACACACACAAGCAGTACACGTTAAGCTCTaGATTCCCACTATAGGGGTTGGTCCTCCAGCCACG +
Preference number: 3 (lower is better)
Translates to: THAHTQAVHVKL*IPTIGVGPPAT
Trigger: CGTGGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTGTGTGTGTGCGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CAA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGGAGAGGTCTTCATGTTaGGGAAGTGGCTGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQEERSSC*GSGWAG
Trigger: TCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTC...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CAA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTATCTTCATAAAGTCTTaGGTGCTAATAAAGGCTGAC +
Preference number: 3 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPIFIKS*VLIKAD
Trigger: GTCAGCCTTTATTAGCACCAAAGACTTTATGAAGAT...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CAA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATATCTTCATAAAGTCTTaGGTGCTAATAAAGGCTGAC +
Preference number: 3 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDIFIKS*VLIKAD
Trigger: GTCAGCCTTTATTAGCACCAAAGACTTTATGAAGAT...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR GCA 72 bp AGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTaGCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: RCAHFSHSLSAF*QQLLRCWCQER
Trigger: CCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CAA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAAAGAGAGTAGTATTTTaGCTCATCCTCATAGGAGGG +
Preference number: 3 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTKRVVF*LILIGG
Trigger: CCCTCCTATGAGGATGAGCAAAAATACTACTCTCTT...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CAA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGAAAGAGAGTAGTATTTTaGCTCATCCTCATAGGAGGG +
Preference number: 3 (lower is better)
Translates to: PWIHRHERVISRPGEGKGKRVVF*LILIGG
Trigger: CCCTCCTATGAGGATGAGCAAAAATACTACTCTCTT...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR TCA 72 bp TTCTTGTCTGAATTTTCAAGTGGGGTGAACAATGACTaGGAGGAAAGCTGTCCCGGCCCTCTGCCTCGTACA +
Preference number: 3 (lower is better)
Translates to: FLSEFSSGVNND*EESCPGPLPRT
Trigger: TGTACGAGGCAGAGGGCCGGGACAGCTTTCCTCTCAGTCATTGTTCACCCCACTTGAAAATTCAGACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR TCA 72 bp CCTGTTTGCCTAATATACAACACCCACAGACCCTTCTaGGAGTCTGACAGGAGCTTTAACCTTGAGGGAAGG +
Preference number: 3 (lower is better)
Translates to: PVCLIYNTHRPF*ESDRSFNLEGR
Trigger: CCTTCCCTCAAGGTTAAAGCTCCTGTCAGACTCTCAGAAGGGTCTGTGGGTGTTGTATATTAGGCAAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR-3UTR CAA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGAATCTTCATAAAGTCTTaGGTGCTAATAAAGGCTGAC +
Preference number: 3 (lower is better)
Translates to: PWIHRHERVISRPGEGKGIFIKS*VLIKAD
Trigger: GTCAGCCTTTATTAGCACCAAAGACTTTATGAAGAT...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR TCA 72 bp TGGGATCTTCATAAAGTCTTTGGTGCTAATAAAGGCTaGCTGAAGCAGCAAGTCCTGAAGCCCCAGATCCAG +
Preference number: 3 (lower is better)
Translates to: WDLHKVFGANKG*LKQQVLKPQIQ
Trigger: CTGGATCTGGGGCTTCAGGACTTGCTGCTTCAGTCAGCCTTTATTAGCACCAAAGACTTTATGAAGATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR TCA 72 bp AGGAGAAAGGCAGCCAGGAACTGTGGTTCCCACACATaGAATCTTTTAAGCAAAGTTTTCTTGTCTGAATTT +
Preference number: 3 (lower is better)
Translates to: RRKAARNCGSHT*NLLSKVFLSEF
Trigger: AAATTCAGACAAGAAAACTTTGCTTAAAAGATTTCATGTGTGGGAACCACAGTTCCTGGCTGCCTTTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACCTGTCATGGCCAGGGTaGCGGCGGGGGCAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: PSASYTWERWGNRAPWIHLSWPG*RRGQRA
Trigger: CGCCCTCTGCCCCCGCCGGCACCCTGGCCATGACAG...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR GCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATGCTGTCCCGGCCCTCTaGCTCGTACACCTGGGAACG +
Preference number: 4 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDAVPAL*LVHLGT
Trigger: CGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACAGC...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGAGCCTCAGTCCGGGGTTaGGGACTCCCGGTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGASVRG*GLPVPR
Trigger: GCGGGGGACCGGGAGTCCTCAACCCCGGACTGAGGC...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR CCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGGGCCGGCCTGTCTGCTaGCCTTGCGTCCCGCGCCTC +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTGRPVC*PCVPRL
Trigger: GAGGCGCGGGACGCAAGGCCAGCAGACAGGCCGGCC...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR TCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGGCTAGGGTCAAACTaGCCCAGGACCCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPGLGSN*PRTQGV
Trigger: TACTCCCTGGGTCCTGGGTCAGTTTGACCCTAGCCC...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTCTGCAGGCATGGCCATaGGGGCAACCATCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPLQAWP*GQPSQK
Trigger: CTTCTGGGATGGTTGCCCCCATGGCCATGCCTGCAG...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTTCCCACTATAGGGGTTaGTCCTCCAGCCACGGAGCC +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPSHYRG*SSSHGA
Trigger: GGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGGA...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATCAGATGGGGAGAGGGTaGGAGGCGGAACACACACTC +
Preference number: 4 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDQMGRG*EAEHTL
Trigger: GAGTGTGTGTTCCGCCTCCCACCCTCTCCCCATCTG...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTCCAGAAGCTCCTGGCTaGGCAACCATGCCTACTGGT +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPPEAPG*ATMPTG
Trigger: ACCAGTAGGCATGGTTGCTCAGCCAGGAGCTTCTGG...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCCCCAGGGGCACCTCCTaGGCGGGGAGAGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPAPRGTS*AGRALS
Trigger: GGAGAGGGCTCTCCCCGCTCAGGAGGTGCCCCTGGG...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR GCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATAGAGCCGGCACTCCCTaGAGTTGGCATGGAACCTAC +
Preference number: 4 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDRAGTP*SWHGTY
Trigger: GTAGGTTCCATGCCAACTGCAGGGAGTGCCGGCTCT...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTCATAGCTGCCATGCCTaGCATGTAGCCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPHSCHA*HVASLL
Trigger: CAGCAGGCTGGCTACATGGCAGGCATGGCAGCTATG...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATCATAGCTGCCATGCCTaGCATGTAGCCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDHSCHA*HVASLL
Trigger: CAGCAGGCTGGCTACATGGCAGGCATGGCAGCTATG...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTAGTCTGGGGCATAGCTaGCATGCCTGCCATGTAGCC +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPSLGHS*HACHVA
Trigger: GGCTACATGGCAGGCATGGCAGCTATGCCCCAGACT...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAGCTGTCCCGGCCCTCTaGCTCGTACACCTGGGAACG +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTAVPAL*LVHLGT
Trigger: CGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACAGC...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATTATAGCCTGCAGGCATaGCCATGGGGGCAACCATCC +
Preference number: 4 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDYSLQA*PWGQPS
Trigger: GGATGGTTGCCCCCATGGCCATGCCTGCAGGCTATA...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAACGCAGATGACCCTCTaGCCGGCCTGTCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTTQMTL*PACLLA
Trigger: GGCCAGCAGACAGGCCGGCCAGAGGGTCATCTGCGT...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR CCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAGGACCACGAGCCTCCTaGGTGCCGGACGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTGPRAS*VPDADD
Trigger: GTCATCTGCGTCCGGCACCCAGGAGGCTCGTGGTCC...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR TCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTACAGCTGGGTCTATCTaGGGTCGCCGAAAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPTAGSI*GRRKVS
Trigger: TGAGACCTTTCGGCGACCTCAGATAGACCCAGCTGT...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGTAGGCTGTGGGATATaGCATCTGAGCGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPVGCGI*HLSGSH
Trigger: ATGGCTCCCGCTCAGATGGCATATCCCACAGCCTAC...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATCTGGCTGAGCAACCATaGCTACTGGTGGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDLAEQP*LLVEAS
Trigger: TGATGCCTCCACCAGTAGGCATGGTTGCTCAGCCAG...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTCTGGCTGAGCAACCATaGCTACTGGTGGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPLAEQP*LLVEAS
Trigger: TGATGCCTCCACCAGTAGGCATGGTTGCTCAGCCAG...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCTCTGGCCGGCCTGTCTaGTGGCCTTGCGTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPASGRPV*WPCVPR
Trigger: GCGCGGGACGCAAGGCCAGCAGACAGGCCGGCCAGA...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR GCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGGCCTCCAAGAGAGGCTaGGGGGCCAGAGACCCTCAG +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTASKRG*GARDPQ
Trigger: CTGAGGGTCTCTGGCCCCGCAGCCTCTCTTGGAGGC...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR CCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATCATCCCAGAAGCTCCTaGCTGAGCAACCATGCCTAC +
Preference number: 4 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDHPRSS*LSNHAY
Trigger: GTAGGCATGGTTGCTCAGCCAGGAGCTTCTGGGATG...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTTTGCAGCTGCTGAGCTaGCTGGACCCCATACACAGT +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPLQLLS*LDPIHS
Trigger: ACTGTGTATGGGGTCCAGCCAGCTCAGCAGCTGCAA...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAGTGCCAGGAGAGGACTaGGGAGGACGTTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTVPGED*GGRWDG
Trigger: GCCATCCCAACGTCCTCCCCAGTCCTCTCCTGGCAC...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGTCCCACTATAGGGGTTaGTCCTCCAGCCACGGAGCC +
Preference number: 4 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGSHYRG*SSSHGA
Trigger: GGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGGA...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACTCCCACTATAGGGGTTaGTCCTCCAGCCACGGAGCC +
Preference number: 4 (lower is better)
Translates to: PSASYTWERWGNRAPWIHSHYRG*SSSHGA
Trigger: GGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGGA...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGCAGATGGGGAGAGGGTaGGAGGCGGAACACACACTC +
Preference number: 4 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRQMGRG*EAEHTL
Trigger: GAGTGTGTGTTCCGCCTCCCACCCTCTCCCCATCTG...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGCAGATGGGGAGAGGGTaGGAGGCGGAACACACACTC +
Preference number: 4 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGQMGRG*EAEHTL
Trigger: GAGTGTGTGTTCCGCCTCCCACCCTCTCCCCATCTG...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGAATACCCAGAGCAGATaGGGAGAGGGTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGNTQSR*GEGGRR
Trigger: CCGCCTCCCACCCTCTCCCCATCTGCTCTGGGTATT...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGCCAGAAGCTCCTGGCTaGGCAACCATGCCTACTGGT +
Preference number: 4 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRPEAPG*ATMPTG
Trigger: ACCAGTAGGCATGGTTGCTCAGCCAGGAGCTTCTGG...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACCGGCACACCCATCATTaGTGCCTGCATGCCACCCAT +
Preference number: 4 (lower is better)
Translates to: PSASYTWERWGNRAPWIHRHTHH*CLHATH
Trigger: ATGGGTGGCATGCAGGCATCAATGATGGGTGTGCCG...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTACAGGCATGAAAGAGTaGTCAGCAGACCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPTGMKE*SADREK
Trigger: CTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGT...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGGCCACCCATATAGCCTaGAGGCATGGCCATGGGGGC +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTATHIA*RHGHGG
Trigger: GCCCCCATGGCCATGCCTGCAGGCTATATGGGTGGC...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGGGCCCAACAAATCCATaGCAGGCGCTGTGGATTTCG +
Preference number: 4 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGGPTNP*QALWIS
Trigger: CGAAATCCACAGCGCCTGTCATGGATTTGTTGGGCC...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACACCAGAAGCTCCTGGCTaGGCAACCATGCCTACTGGT +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTPEAPG*ATMPTG
Trigger: ACCAGTAGGCATGGTTGCTCAGCCAGGAGCTTCTGG...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACACGGCACACCCATCATTaGTGCCTGCATGCCACCCAT +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTRHTHH*CLHATH
Trigger: ATGGGTGGCATGCAGGCATCAATGATGGGTGTGCCG...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGAGGGCTAGGGTCAAACTaGCCCAGGACCCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGGLGSN*PRTQGV
Trigger: TACTCCCTGGGTCCTGGGTCAGTTTGACCCTAGCCC...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATAAGTGGGGTGAACAATaGCTGAGAGGAAAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDKWGEQ*LRGKLS
Trigger: GGACAGCTTTCCTCTCAGTCATTGTTCACCCCACTT...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTTTTACCCTGGATATGTaGACCCCCAGATTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPFTLDM*TPRFLW
Trigger: CCACAGGAATCTGGGGGTGCACATATCCAGGGTAAA...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACGTAGGCTGTGGGATATaGCATCTGAGCGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: PSASYTWERWGNRAPWIHVGCGI*HLSGSH
Trigger: ATGGCTCCCGCTCAGATGGCATATCCCACAGCCTAC...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGGTAGGCTGTGGGATATaGCATCTGAGCGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGVGCGI*HLSGSH
Trigger: ATGGCTCCCGCTCAGATGGCATATCCCACAGCCTAC...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGCTGGCTGAGCAACCATaGCTACTGGTGGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRLAEQP*LLVEAS
Trigger: TGATGCCTCCACCAGTAGGCATGGTTGCTCAGCCAG...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGAGCCACCCATATAGCCTaGAGGCATGGCCATGGGGGC +
Preference number: 4 (lower is better)
Translates to: PWIHRHERVISRPGEGKGATHIA*RHGHGG
Trigger: GCCCCCATGGCCATGCCTGCAGGCTATATGGGTGGC...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGAGAGTCTGATTTGCTaGCTGTCCATTTCCGCCACT +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPESLIC*LSISAT
Trigger: AGTGGCGGAAATGGACAGGCAGCAAATCAGACTCTC...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACTGAGAGTCTGATTTaGTGCCTGTCCATTTCCGCC +
Preference number: 4 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDTESLI*CLSISA
Trigger: GGCGGAAATGGACAGGCAGCAAATCAGACTCTCAGT...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCGCTGTCCCGGCCCTCTaGCTCGTACACCTGGGAACG +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPAAVPAL*LVHLGT
Trigger: CGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACAGC...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCCACGAGCCTCCTGGGTaGCGGACGCAGATGACCCTC +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPAHEPPG*RTQMTL
Trigger: GAGGGTCATCTGCGTCCGGCACCCAGGAGGCTCGTG...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR CCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTACCCCCAGATTCCTGTaGATTCCAGCACATCGAATG +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPTPRFL*IPAHRM
Trigger: CATTCGATGTGCTGGAATCCACAGGAATCTGGGGGT...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTTCCCTGCAGTTGGCATaGAACCTACAACCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPSLQLA*NLQPFW
Trigger: CCAGAAAGGTTGTAGGTTCCATGCCAACTGCAGGGA...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGCATCCCAGAAGCTCCTaGCTGAGCAACCATGCCTAC +
Preference number: 4 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRHPRSS*LSNHAY
Trigger: GTAGGCATGGTTGCTCAGCCAGGAGCTTCTGGGATG...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACATATAGCCTGCAGGCATaGCCATGGGGGCAACCATCC +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTYSLQA*PWGQPS
Trigger: GGATGGTTGCCCCCATGGCCATGCCTGCAGGCTATA...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGTTGCAGCTGCTGAGCTaGCTGGACCCCATACACAGT +
Preference number: 4 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRLQLLS*LDPIHS
Trigger: ACTGTGTATGGGGTCCAGCCAGCTCAGCAGCTGCAA...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGTTGCAGCTGCTGAGCTaGCTGGACCCCATACACAGT +
Preference number: 4 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGLQLLS*LDPIHS
Trigger: ACTGTGTATGGGGTCCAGCCAGCTCAGCAGCTGCAA...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTTTCATGTTTGGGAAGTaGCTGGGCAGGATGCCAAAC +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPFMFGK*LGRMPN
Trigger: GTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAA...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATAGAGGTCTTCATGTTTaGGAAGTGGCTGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDRGLHV*EVAGQD
Trigger: ATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCT...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACCAACTTCTAAGGTGCTaGTGCCAGGAGAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: PSASYTWERWGNRAPWIHQLLRC*CQERTG
Trigger: CCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTG...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGTCTGCCTCGTACACCTaGGAACGGTGGGGAAACAGA +
Preference number: 4 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRSASYT*ERWGNR
Trigger: TCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGA...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACATTGGCCAGGACAGCCTaGTACCGATCCACGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTLARTA*YRSTSF
Trigger: GAAGGACGTGGATCGGTACCAGGCTGTCCTGGCCAA...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR TCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGCCAGAAGCTCCTGGCTaGGCAACCATGCCTACTGGT +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTPEAPG*ATMPTG
Trigger: ACCAGTAGGCATGGTTGCTCAGCCAGGAGCTTCTGG...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGACCCACAGACCCTTCTaGGAGTCTGACAGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRTHRPF*ESDRSF
Trigger: AAAGCTCCTGTCAGACTCTCAGAAGGGTCTGTGGGT...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTGGTGCCGGACGCAGATaGCCCTCTGGCCGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTGAGRR*PSGRPV
Trigger: GACAGGCCGGCCAGAGGGTCATCTGCGTCCGGCACC...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR GCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGAAGAGCCGGCACTCCCTaGAGTTGGCATGGAACCTAC +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGRAGTP*SWHGTY
Trigger: GTAGGTTCCATGCCAACTGCAGGGAGTGCCGGCTCT...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAGTAGGCTGTGGGATATaGCATCTGAGCGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTVGCGI*HLSGSH
Trigger: ATGGCTCCCGCTCAGATGGCATATCCCACAGCCTAC...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp AAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCGCCACCCATATAGCCTaGAGGCATGGCCATGGGGGC +
Preference number: 4 (lower is better)
Translates to: KQQRGLHVWEVAGQDAKPATHIA*RHGHGG
Trigger: GCCCCCATGGCCATGCCTGCAGGCTATATGGGTGGC...GGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGCATAGCTGCCATGCCTaGCATGTAGCCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTHSCHA*HVASLL
Trigger: CAGCAGGCTGGCTACATGGCAGGCATGGCAGCTATG...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp AAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCACTCCCACGGCGCTCTaGTGCCTCTCCTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: KQQRGLHVWEVAGQDAKPTPTAL*CLSCCT
Trigger: AGTGCAGCAGGAGAGGCAGCAGAGCGCCGTGGGAGT...GGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGCACTCCCTGCAGTTaGCATGGAACCTACAACCTT +
Preference number: 4 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRGTPCS*HGTYNL
Trigger: AAGGTTGTAGGTTCCATGCCAACTGCAGGGAGTGCC...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACGGCACTCCCTGCAGTTaGCATGGAACCTACAACCTT +
Preference number: 4 (lower is better)
Translates to: PSASYTWERWGNRAPWIHGTPCS*HGTYNL
Trigger: AAGGTTGTAGGTTCCATGCCAACTGCAGGGAGTGCC...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGAGCTGGGGTAGGCTGTaGGATATGCCATCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTSWGRL*DMPSER
Trigger: CCGCTCAGATGGCATATCCCACAGCCTACCCCAGCT...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAAGCCAGCCTGCTGGGTaGTCATCATTCCATTCGGCA +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTSQPAG*SSFHSA
Trigger: TGCCGAATGGAATGATGACCACCCAGCAGGCTGGCT...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGGACTGGGGAGGACGTTaGGATGGCTATGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTDWGGR*DGYGAC
Trigger: ACATGCCCCATAGCCATCCCAACGTCCTCCCCAGTC...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACACAACTTCTAAGGTGCTaGTGCCAGGAGAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTQLLRC*CQERTG
Trigger: CCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTG...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGTACACCTGGGAACGGTaGGGAAACAGAGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTYTWER*GNRAPW
Trigger: CCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTA...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATCACATCGAATGCAGATaGACACACCAATGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDHIECR*THQCSK
Trigger: CTTGGAACATTGGTGTGTTCATCTGCATTCGATGTG...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGACAGCTGGGTCTATCTaGGGTCGCCGAAAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTTAGSI*GRRKVS
Trigger: TGAGACCTTTCGGCGACCTCAGATAGACCCAGCTGT...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAGTGGGATATGCCATCTaGGCGGGAGCCATGAACATT +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTVGYAI*AGAMNI
Trigger: AATGTTCATGGCTCCCGCTCAGATGGCATATCCCAC...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACTCCACATCTGAGGACTaGGAGTCTGATTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PSASYTWERWGNRAPWIHSTSED*ESDLLP
Trigger: AGGCAGCAAATCAGACTCTCAGTCCTCAGATGTGGA...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACGGTGCTAATAAAGGCTaGCTGAAGCAGCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PSASYTWERWGNRAPWIHGANKG*LKQQVL
Trigger: CAGGACTTGCTGCTTCAGTCAGCCTTTATTAGCACC...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGGGTGCTAATAAAGGCTaGCTGAAGCAGCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGGANKG*LKQQVL
Trigger: CAGGACTTGCTGCTTCAGTCAGCCTTTATTAGCACC...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAACAGGCATGAAAGAGTaGTCAGCAGACCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTTGMKE*SADREK
Trigger: CTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGT...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACTTTACCCTGGATATGTaGACCCCCAGATTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PSASYTWERWGNRAPWIHFTLDM*TPRFLW
Trigger: CCACAGGAATCTGGGGGTGCACATATCCAGGGTAAA...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGAAGTCTGGGGCATAGCTaGCATGCCTGCCATGTAGCC +
Preference number: 4 (lower is better)
Translates to: PWIHRHERVISRPGEGKGSLGHS*HACHVA
Trigger: GGCTACATGGCAGGCATGGCAGCTATGCCCCAGACT...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGACTGAGAGTCTGATTTaGTGCCTGTCCATTTCCGCC +
Preference number: 4 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGTESLI*CLSISA
Trigger: GGCGGAAATGGACAGGCAGCAAATCAGACTCTCAGT...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATGTACACGTTAAGCTCTaGATTCCCACTATAGGGGTT +
Preference number: 4 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDVHVKL*IPTIGV
Trigger: AACCCCTATAGTGGGAATGCAGAGCTTAACGTGTAC...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGGGTTTCCCTGGCAGCTaGCGTCAGCTCCGCTACCAC +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQEGFPGS*RQLRYH
Trigger: GTGGTAGCGGAGCTGACGGCAGCTGCCAGGGAAACC...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR GCA 90 bp AAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCCGTCCTTCACCGACTTaGCTGTCATGGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: KQQRGLHVWEVAGQDAKPRPSPT*LSWPGC
Trigger: GCACCCTGGCCATGACAGGCAAGTCGGTGAAGGACG...GGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR CCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACACCCCCAGATTCCTGTaGATTCCAGCACATCGAATG +
Preference number: 4 (lower is better)
Translates to: PSASYTWERWGNRAPWIHTPRFL*IPAHRM
Trigger: CATTCGATGTGCTGGAATCCACAGGAATCTGGGGGT...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTTCTTACTATTTGCAATaGAGCAGGCCACAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPSYYLQ*SRPQEH
Trigger: ATGCTCCTGTGGCCTGCTCCATTGCAAATAGTAAGA...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAGGCACTCCCTGCAGTTaGCATGGAACCTACAACCTT +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTGTPCS*HGTYNL
Trigger: AAGGTTGTAGGTTCCATGCCAACTGCAGGGAGTGCC...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGAAGCTGGGGTAGGCTGTaGGATATGCCATCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: PWIHRHERVISRPGEGKGSWGRL*DMPSER
Trigger: CCGCTCAGATGGCATATCCCACAGCCTACCCCAGCT...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGAAGCAACCATGCCTACTaGTGGAGGCATCATGCTCCC +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGSNHAY*WRHHAP
Trigger: GGGAGCATGATGCCTCCACCAGTAGGCATGGTTGCT...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGAGCCAGCCTGCTGGGTaGTCATCATTCCATTCGGCA +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTSQPAG*SSFHSA
Trigger: TGCCGAATGGAATGATGACCACCCAGCAGGCTGGCT...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGAACCCCATACACAGTCTaGGGCATAGCTGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGTPYTV*GIAAMP
Trigger: AGGCATGGCAGCTATGCCCCAGACTGTGTATGGGGT...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAGAGGTCTTCATGTTTaGGAAGTGGCTGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: PSASYTWERWGNRAPWIHRGLHV*EVAGQD
Trigger: ATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCT...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGAGGGAGGACGTTGGGATaGCTATGGGGCATGTACAAC +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGGRTLG*LWGMYN
Trigger: GTTGTACATGCCCCATAGCCATCCCAACGTCCTCCC...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGGGGAGGACGTTGGGATaGCTATGGGGCATGTACAAC +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTGRTLG*LWGMYN
Trigger: GTTGTACATGCCCCATAGCCATCCCAACGTCCTCCC...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGGTGCCAGGAGAGGACTaGGGAGGACGTTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQEVPGED*GGRWDG
Trigger: GCCATCCCAACGTCCTCCCCAGTCCTCTCCTGGCAC...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp AAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCTCCCACTATAGGGGTTaGTCCTCCAGCCACGGAGCC +
Preference number: 4 (lower is better)
Translates to: KQQRGLHVWEVAGQDAKPSHYRG*SSSHGA
Trigger: GGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGGA...GGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTGCGCCTCGGTTTCCCTaGCAGCTGCCGTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTAPRFP*QLPSAP
Trigger: CGGAGCTGACGGCAGCTGCCAGGGAAACCGAGGCGC...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR CCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTCCGACTTGCCTGTCATaGCCAGGGTGCCGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCPTCLS*PGCRRG
Trigger: CCCCCGCCGGCACCCTGGCCATGACAGGCAAGTCGG...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR CCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACCGCGGCCCTTTAGACTaGCAATCTGCACAAAACTTG +
Preference number: 4 (lower is better)
Translates to: PSASYTWERWGNRAPWIHRGPLD*QSAQNL
Trigger: CAAGTTTTGTGCAGATTGCCAGTCTAAAGGGCCGCG...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR TCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGAACAGGCATGAAAGAGTaGTCAGCAGACCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGTGMKE*SADREK
Trigger: CTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGT...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACACTGGATACACAGGCATaGAAGAGTGATCAGCAGACC +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTLDTQA*KSDQQT
Trigger: GGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAG...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCAGAGCCGGCACTCCCTaGAGTTGGCATGGAACCTAC +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPARAGTP*SWHGTY
Trigger: GTAGGTTCCATGCCAACTGCAGGGAGTGCCGGCTCT...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGGGGAGCCATGAACATTaGTTGAGTAGGCATTTGAGG +
Preference number: 4 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGGSHEH*LSRHLR
Trigger: CCTCAAATGCCTACTCAAGCAATGTTCATGGCTCCC...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
56% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGAGCCATGAACATTaGTTGAGTAGGCATTTGAGG +
Preference number: 4 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRGSHEH*LSRHLR
Trigger: CCTCAAATGCCTACTCAAGCAATGTTCATGGCTCCC...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGACTGGCTGAGCAACCATaGCTACTGGTGGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: PWIHRHERVISRPGEGKGLAEQP*LLVEAS
Trigger: TGATGCCTCCACCAGTAGGCATGGTTGCTCAGCCAG...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATGTCCATAGTTCATCATaGCATTGGCTCCATAGAAGT +
Preference number: 4 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDVHSSS*HWLHRS
Trigger: ACTTCTATGGAGCCAATGGCATGATGAACTATGGAC...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCCTGTCTGCTGGCCTTaGGTCCCGCGCCTCGGTTTC +
Preference number: 4 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLPVCWP*VPRLGF
Trigger: GAAACCGAGGCGCGGGACGCAAGGCCAGCAGACAGG...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR GCA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCCCACGGCGCTCTGCTaGCTCTCCTGCTGCACTCAC +
Preference number: 4 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLPTALC*LSCCTH
Trigger: GTGAGTGCAGCAGGAGAGGCAGCAGAGCGCCGTGGG...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614549.4
CDS-3UTR GCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTTTTTTGTGCAAATCTTaGTCTGCCCACTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPFLCKS*SAHFPH
Trigger: ATGGGGAAAGTGGGCAGAGCAAGATTTGCACAAAAA...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000614549.4
CDS-3UTR CCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGCTGCAGGCATGGCCATaGGGGCAACCATCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQELQAWP*GQPSQK
Trigger: CTTCTGGGATGGTTGCCCCCATGGCCATGCCTGCAG...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTAGTTCATCATGCCATTaGCTCCATAGAAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPSSSCH*LHRSSS
Trigger: GGATGAACTTCTATGGAGCCAATGGCATGATGAACT...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATAGTTCATCATGCCATTaGCTCCATAGAAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDSSSCH*LHRSSS
Trigger: GGATGAACTTCTATGGAGCCAATGGCATGATGAACT...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp AAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCGACTGGGGAGGACGTTaGGATGGCTATGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: KQQRGLHVWEVAGQDAKPDWGGR*DGYGAC
Trigger: ACATGCCCCATAGCCATCCCAACGTCCTCCCCAGTC...GGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGACAACTTCTAAGGTGCTaGTGCCAGGAGAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: PWIHRHERVISRPGEGKGQLLRC*CQERTG
Trigger: CCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTG...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGCAGATGGGGAGAGGGTaGGAGGCGGAACACACACTC +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQEQMGRG*EAEHTL
Trigger: GAGTGTGTGTTCCGCCTCCCACCCTCTCCCCATCTG...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAATACCCAGAGCAGATaGGGAGAGGGTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQENTQSR*GEGGRR
Trigger: CCGCCTCCCACCCTCTCCCCATCTGCTCTGGGTATT...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp AAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCTACACCTGGGAACGGTaGGGAAACAGAGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: KQQRGLHVWEVAGQDAKPYTWER*GNRAPW
Trigger: CCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTA...GGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACACTGGTCGAGGTTAACTaGCTTTACCCTGGATATGTG +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTLVEVN*LYPGYV
Trigger: CACATATCCAGGGTAAAGTCAGTTAACCTCGACCAG...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCACAGCTGGGTCTATCTaGGGTCGCCGAAAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPATAGSI*GRRKVS
Trigger: TGAGACCTTTCGGCGACCTCAGATAGACCCAGCTGT...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGCGGCACACCCATCATTaGTGCCTGCATGCCACCCAT +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQERHTHH*CLHATH
Trigger: ATGGGTGGCATGCAGGCATCAATGATGGGTGTGCCG...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAGGGGAGAGCGAGGGCTaGAGAGAATGGCAGCCATAC +
Preference number: 4 (lower is better)
Translates to: HKATERSSCLGSGWAGCQGESEG*REWQPY
Trigger: GTATGGCTGCCATTCTCTTCAGCCCTCGCTCTCCCC...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGAACCCACAGACCCTTCTaGGAGTCTGACAGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: PWIHRHERVISRPGEGKGTHRPF*ESDRSF
Trigger: AAAGCTCCTGTCAGACTCTCAGAAGGGTCTGTGGGT...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGAAAGTGGGGTGAACAATaGCTGAGAGGAAAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGKWGEQ*LRGKLS
Trigger: GGACAGCTTTCCTCTCAGTCATTGTTCACCCCACTT...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATTTCATAAAGTCGGTTTaGCTTTCCATTTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDFIKSV*LSISHL
Trigger: GAGATGGGAAATGGAAAGGCAAACCGACTTTATGAA...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAGGGAGCCATGAACATTaGTTGAGTAGGCATTTGAGG +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTGSHEH*LSRHLR
Trigger: CCTCAAATGCCTACTCAAGCAATGTTCATGGCTCCC...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGACTGAGAGTCTGATTTaGTGCCTGTCCATTTCCGCC +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTTESLI*CLSISA
Trigger: GGCGGAAATGGACAGGCAGCAAATCAGACTCTCAGT...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGAGTGGCTGGGCAGGATaGCAAACCCCAAATGACTTA +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTSGWAG*QTPNDL
Trigger: TAAGTCATTTGGGGTTTGGCATCCTGCCCAGCCACT...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGAACCCCCAGATTCCTGTaGATTCCAGCACATCGAATG +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGTPRFL*IPAHRM
Trigger: CATTCGATGTGCTGGAATCCACAGGAATCTGGGGGT...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATTCTCTAGGGTATTGCTaGTCTTACTATTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDSLGYC*SYYLQW
Trigger: CCATTGCAAATAGTAAGACCAGCAATACCCTAGAGA...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGTCCCTGCAGTTGGCATaGAACCTACAACCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTSLQLA*NLQPFW
Trigger: CCAGAAAGGTTGTAGGTTCCATGCCAACTGCAGGGA...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGCTGGGGTAGGCTGTaGGATATGCCATCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQESWGRL*DMPSER
Trigger: CCGCTCAGATGGCATATCCCACAGCCTACCCCAGCT...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCCATCCCAGAAGCTCCTaGCTGAGCAACCATGCCTAC +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPAHPRSS*LSNHAY
Trigger: GTAGGCATGGTTGCTCAGCCAGGAGCTTCTGGGATG...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGTATAGCCTGCAGGCATaGCCATGGGGGCAACCATCC +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQEYSLQA*PWGQPS
Trigger: GGATGGTTGCCCCCATGGCCATGCCTGCAGGCTATA...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCAGCCAGCCTGCTGGGTaGTCATCATTCCATTCGGCA +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPASQPAG*SSFHSA
Trigger: TGCCGAATGGAATGATGACCACCCAGCAGGCTGGCT...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCTGTTTGGGAAGTGGCTaGGCAGGATGCCAAACCCCA +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPACLGSG*AGCQTP
Trigger: TGGGGTTTGGCATCCTGCCCAGCCACTTCCCAAACA...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGGACTGGGGAGGACGTTaGGATGGCTATGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQEDWGGR*DGYGAC
Trigger: ACATGCCCCATAGCCATCCCAACGTCCTCCCCAGTC...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCTCTGCCTCGTACACCTaGGAACGGTGGGGAAACAGA +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPASASYT*ERWGNR
Trigger: TCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGA...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACACACATCGAATGCAGATaGACACACCAATGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTHIECR*THQCSK
Trigger: CTTGGAACATTGGTGTGTTCATCTGCATTCGATGTG...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACATTTCCGCCACTCATTaGCTGTCCATAGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: PSASYTWERWGNRAPWIHISATH*LSIVHH
Trigger: ATGATGAACTATGGACAGTCAATGAGTGGCGGAAAT...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGATCCACATCTGAGGACTaGGAGTCTGATTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PWIHRHERVISRPGEGKGSTSED*ESDLLP
Trigger: AGGCAGCAAATCAGACTCTCAGTCCTCAGATGTGGA...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTCCCCAAATGACTTATTaGGCAATTTCTAAACCAAAC +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPPQMTY*AISKPN
Trigger: GTTTGGTTTAGAAATTGCTCAATAAGTCATTTGGGG...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTATGCCAAACCCCAAATaGCTTATTGAGCAATTTCTA +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPMPNPK*LIEQFL
Trigger: TAGAAATTGCTCAATAAGTCATTTGGGGTTTGGCAT...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCACCCACAGACCCTTCTaGGAGTCTGACAGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPATHRPF*ESDRSF
Trigger: AAAGCTCCTGTCAGACTCTCAGAAGGGTCTGTGGGT...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTGGGCTAGGGTCAAACTaGCCCAGGACCCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLGLGSN*PRTQGV
Trigger: TACTCCCTGGGTCCTGGGTCAGTTTGACCCTAGCCC...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTGGGCTAGGGTCAAACTaGCCCAGGACCCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTGLGSN*PRTQGV
Trigger: TACTCCCTGGGTCCTGGGTCAGTTTGACCCTAGCCC...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGACTGGATACACAGGCATaGAAGAGTGATCAGCAGACC +
Preference number: 4 (lower is better)
Translates to: PWIHRHERVISRPGEGKGLDTQA*KSDQQT
Trigger: GGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAG...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTTGTGGTTCCCACACATaGAATCTTTTAAGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPCGSHT*NLLSKV
Trigger: AACTTTGCTTAAAAGATTTCATGTGTGGGAACCACA...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTGCCACCCATATAGCCTaGAGGCATGGCCATGGGGGC +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCATHIA*RHGHGG
Trigger: GCCCCCATGGCCATGCCTGCAGGCTATATGGGTGGC...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGAGTTTAAGTGCCTTCTaGCAACAACTTCTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRSLSAF*QQLLRC
Trigger: GCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACT...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGAACCTACAACCTTTCTaGAACCGGAAGAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTNLQPF*NRKKKG
Trigger: CCCCTTCTTCTTCCGGTTCCAGAAAGGTTGTAGGTT...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp AAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCAACCATGCCTACTGGTaGAGGCATCATGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KQQRGLHVWEVAGQDAKPNHAYW*RHHAPH
Trigger: ATGGGGAGCATGATGCCTCCACCAGTAGGCATGGTT...GGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGCAACCATGCCTACTaGTGGAGGCATCATGCTCCC +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQESNHAY*WRHHAP
Trigger: GGGAGCATGATGCCTCCACCAGTAGGCATGGTTGCT...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAATATAGCCTGCAGGCATaGCCATGGGGGCAACCATCC +
Preference number: 4 (lower is better)
Translates to: HKATERSSCLGSGWAGCQYSLQA*PWGQPS
Trigger: GGATGGTTGCCCCCATGGCCATGCCTGCAGGCTATA...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGCCAGCCTGCTGGGTaGTCATCATTCCATTCGGCA +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQESQPAG*SSFHSA
Trigger: TGCCGAATGGAATGATGACCACCCAGCAGGCTGGCT...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGATTCATGTTTGGGAAGTaGCTGGGCAGGATGCCAAAC +
Preference number: 4 (lower is better)
Translates to: PWIHRHERVISRPGEGKGFMFGK*LGRMPN
Trigger: GTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAA...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTATGTGTGTCTGTGTGTaGGATCTTCATAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPMCVCV*DLHKVF
Trigger: AAAGACTTTATGAAGATCCCACACACAGACACACAT...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAATACACCTGGGAACGGTaGGGAAACAGAGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: HKATERSSCLGSGWAGCQYTWER*GNRAPW
Trigger: CCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTA...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR CAA 72 bp TCCAGAAAGCAACTCAGGGCGAAGAGAGTAGTATTTTaGCTCATCCTCATAGGAGGGGGCTTGCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: SRKQLRAKRVVF*LILIGGGLPHP
Trigger: GGGGTGAGGCAAGCCCCCTCCTATGAGGATGAGCAAAAATACTACTCTCTTCGCCCTGAGTTGCTTTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAGGCCCAACAAATCCATaGCAGGCGCTGTGGATTTCG +
Preference number: 4 (lower is better)
Translates to: HKATERSSCLGSGWAGCQGPTNP*QALWIS
Trigger: CGAAATCCACAGCGCCTGTCATGGATTTGTTGGGCC...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTCGGCACACCCATCATTaGTGCCTGCATGCCACCCAT +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTRHTHH*CLHATH
Trigger: ATGGGTGGCATGCAGGCATCAATGATGGGTGTGCCG...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp AAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCTCCACATCTGAGGACTaGGAGTCTGATTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KQQRGLHVWEVAGQDAKPSTSED*ESDLLP
Trigger: AGGCAGCAAATCAGACTCTCAGTCCTCAGATGTGGA...GGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCGGTGCTAATAAAGGCTaGCTGAAGCAGCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPAGANKG*LKQQVL
Trigger: CAGGACTTGCTGCTTCAGTCAGCCTTTATTAGCACC...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCAAGTGGGGTGAACAATaGCTGAGAGGAAAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPAKWGEQ*LRGKLS
Trigger: GGACAGCTTTCCTCTCAGTCATTGTTCACCCCACTT...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGCCTTCTCTAGGGTATTaGTGGTCTTACTATTTGCAA +
Preference number: 4 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGPSLGY*WSYYLQ
Trigger: TTGCAAATAGTAAGACCAGCAATACCCTAGAGAAGG...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACCCTTCTCTAGGGTATTaGTGGTCTTACTATTTGCAA +
Preference number: 4 (lower is better)
Translates to: PSASYTWERWGNRAPWIHPSLGY*WSYYLQ
Trigger: TTGCAAATAGTAAGACCAGCAATACCCTAGAGAAGG...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGACTATTTCTTCTGATTTaGTCCCTGGCTCCGGAAACA +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGLFLLI*SLAPET
Trigger: TGTTTCCGGAGCCAGGGAGCAAATCAGAAGAAATAG...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTCATAGCTGCCATGCCTaGCATGTAGCCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTHSCHA*HVASLL
Trigger: CAGCAGGCTGGCTACATGGCAGGCATGGCAGCTATG...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTAGTCTGGGGCATAGCTaGCATGCCTGCCATGTAGCC +
Preference number: 4 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLSLGHS*HACHVA
Trigger: GGCTACATGGCAGGCATGGCAGCTATGCCCCAGACT...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp AAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCGAGAGTCTGATTTGCTaGCTGTCCATTTCCGCCACT +
Preference number: 4 (lower is better)
Translates to: KQQRGLHVWEVAGQDAKPESLIC*LSISAT
Trigger: AGTGGCGGAAATGGACAGGCAGCAAATCAGACTCTC...GGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCGAGAGTCTGATTTGCTaGCTGTCCATTTCCGCCACT +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPAESLIC*LSISAT
Trigger: AGTGGCGGAAATGGACAGGCAGCAAATCAGACTCTC...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGCTCCCACAGTTTAAGTaGCTTCTGCCAACAACTTCT +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTLPQFK*LLPTTS
Trigger: AGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGAG...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGACTCCCACAGTTTAAGTaGCTTCTGCCAACAACTTCT +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGLPQFK*LLPTTS
Trigger: AGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGAG...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGGTACACGTTAAGCTCTaGATTCCCACTATAGGGGTT +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTVHVKL*IPTIGV
Trigger: AACCCCTATAGTGGGAATGCAGAGCTTAACGTGTAC...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCACCCCCAGATTCCTGTaGATTCCAGCACATCGAATG +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPATPRFL*IPAHRM
Trigger: CATTCGATGTGCTGGAATCCACAGGAATCTGGGGGT...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGAAACCTACAACCTTTCTaGAACCGGAAGAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PWIHRHERVISRPGEGKGNLQPF*NRKKKG
Trigger: CCCCTTCTTCTTCCGGTTCCAGAAAGGTTGTAGGTT...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCTCCCTGCAGTTGGCATaGAACCTACAACCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPASLQLA*NLQPFW
Trigger: CCAGAAAGGTTGTAGGTTCCATGCCAACTGCAGGGA...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTAGCTGGGGTAGGCTGTaGGATATGCCATCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTSWGRL*DMPSER
Trigger: CCGCTCAGATGGCATATCCCACAGCCTACCCCAGCT...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAAGCAACCATGCCTACTaGTGGAGGCATCATGCTCCC +
Preference number: 4 (lower is better)
Translates to: HKATERSSCLGSGWAGCQSNHAY*WRHHAP
Trigger: GGGAGCATGATGCCTCCACCAGTAGGCATGGTTGCT...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCCATACACAGTCTaGGGCATAGCTGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: HKATERSSCLGSGWAGCQTPYTV*GIAAMP
Trigger: AGGCATGGCAGCTATGCCCCAGACTGTGTATGGGGT...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGAACGTTGGGATGGCTATaGGGCATGTACAACATAAAG +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGTLGWL*GMYNIK
Trigger: CTTTATGTTGTACATGCCCCATAGCCATCCCAACGT...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAGGGAGGACGTTGGGATaGCTATGGGGCATGTACAAC +
Preference number: 4 (lower is better)
Translates to: HKATERSSCLGSGWAGCQGRTLG*LWGMYN
Trigger: GTTGTACATGCCCCATAGCCATCCCAACGTCCTCCC...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp AAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCGGCAGCCAGGAACTGTaGTTCCCACACATGAAATCT +
Preference number: 4 (lower is better)
Translates to: KQQRGLHVWEVAGQDAKPGSQEL*FPHMKS
Trigger: AGATTTCATGTGTGGGAACCACAGTTCCTGGCTGCC...GGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCGGCAGCCAGGAACTGTaGTTCCCACACATGAAATCT +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPAGSQEL*FPHMKS
Trigger: AGATTTCATGTGTGGGAACCACAGTTCCTGGCTGCC...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGACACAGAAACACCAGTaGGATCTTGGAAAAATTGTG +
Preference number: 4 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRTQKHQ*DLGKIV
Trigger: CACAATTTTTCCAAGATCCCACTGGTGTTTCTGTGT...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539317.2
CDS-3UTR TCA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTGGCCCAACAAATCCATaGCAGGCGCTGTGGATTTCG +
Preference number: 4 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLGPTNP*QALWIS
Trigger: CGAAATCCACAGCGCCTGTCATGGATTTGTTGGGCC...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGCTGGGATCCATACAGTaGAAGAATGGAGTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTLGSIQ*KNGVFR
Trigger: TCTAAAGACTCCATTCTTTCACTGTATGGATCCCAG...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACCCCCAAATGACTTATTaGGCAATTTCTAAACCAAAC +
Preference number: 4 (lower is better)
Translates to: PSASYTWERWGNRAPWIHPQMTY*AISKPN
Trigger: GTTTGGTTTAGAAATTGCTCAATAAGTCATTTGGGG...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGATGCCAAACCCCAAATaGCTTATTGAGCAATTTCTA +
Preference number: 4 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGMPNPK*LIEQFL
Trigger: TAGAAATTGCTCAATAAGTCATTTGGGGTTTGGCAT...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACTGTGGTTCCCACACATaGAATCTTTTAAGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: PSASYTWERWGNRAPWIHCGSHT*NLLSKV
Trigger: AACTTTGCTTAAAAGATTTCATGTGTGGGAACCACA...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACACCTTCTCTAGGGTATTaGTGGTCTTACTATTTGCAA +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTPSLGY*WSYYLQ
Trigger: TTGCAAATAGTAAGACCAGCAATACCCTAGAGAAGG...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGAGTCCATAGTTCATCATaGCATTGGCTCCATAGAAGT +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGVHSSS*HWLHRS
Trigger: ACTTCTATGGAGCCAATGGCATGATGAACTATGGAC...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGAAGTTTAAGTGCCTTCTaGCAACAACTTCTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGSLSAF*QQLLRC
Trigger: GCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACT...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGAGTACACGTTAAGCTCTaGATTCCCACTATAGGGGTT +
Preference number: 4 (lower is better)
Translates to: PWIHRHERVISRPGEGKGVHVKL*IPTIGV
Trigger: AACCCCTATAGTGGGAATGCAGAGCTTAACGTGTAC...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGATCTTACTATTTGCAATaGAGCAGGCCACAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: PWIHRHERVISRPGEGKGSYYLQ*SRPQEH
Trigger: ATGCTCCTGTGGCCTGCTCCATTGCAAATAGTAAGA...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGTCCCTGCAGTTGGCATaGAACCTACAACCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQESLQLA*NLQPFW
Trigger: CCAGAAAGGTTGTAGGTTCCATGCCAACTGCAGGGA...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAGGCACTCCCTGCAGTTaGCATGGAACCTACAACCTT +
Preference number: 4 (lower is better)
Translates to: HKATERSSCLGSGWAGCQGTPCS*HGTYNL
Trigger: AAGGTTGTAGGTTCCATGCCAACTGCAGGGAGTGCC...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTCATCCCAGAAGCTCCTaGCTGAGCAACCATGCCTAC +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTHPRSS*LSNHAY
Trigger: GTAGGCATGGTTGCTCAGCCAGGAGCTTCTGGGATG...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTACCCCATACACAGTCTaGGGCATAGCTGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTTPYTV*GIAAMP
Trigger: AGGCATGGCAGCTATGCCCCAGACTGTGTATGGGGT...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTTTGCAGCTGCTGAGCTaGCTGGACCCCATACACAGT +
Preference number: 4 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLLQLLS*LDPIHS
Trigger: ACTGTGTATGGGGTCCAGCCAGCTCAGCAGCTGCAA...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGAAGTTCATCATGCCATTaGCTCCATAGAAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGSSSCH*LHRSSS
Trigger: GGATGAACTTCTATGGAGCCAATGGCATGATGAACT...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTTGTTTGGGAAGTGGCTaGGCAGGATGCCAAACCCCA +
Preference number: 4 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLCLGSG*AGCQTP
Trigger: TGGGGTTTGGCATCCTGCCCAGCCACTTCCCAAACA...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGTTCATGTTTGGGAAGTaGCTGGGCAGGATGCCAAAC +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQEFMFGK*LGRMPN
Trigger: GTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAA...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGAACGTTGGGATGGCTATaGGGCATGTACAACATAAAG +
Preference number: 4 (lower is better)
Translates to: PWIHRHERVISRPGEGKGTLGWL*GMYNIK
Trigger: CTTTATGTTGTACATGCCCCATAGCCATCCCAACGT...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTTACACCTGGGAACGGTaGGGAAACAGAGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCYTWER*GNRAPW
Trigger: CCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTA...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTTCTGCCTCGTACACCTaGGAACGGTGGGGAAACAGA +
Preference number: 4 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLSASYT*ERWGNR
Trigger: TCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGA...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCCACATCGAATGCAGATaGACACACCAATGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPAHIECR*THQCSK
Trigger: CTTGGAACATTGGTGTGTTCATCTGCATTCGATGTG...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTGGCCCAACAAATCCATaGCAGGCGCTGTGGATTTCG +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCGPTNP*QALWIS
Trigger: CGAAATCCACAGCGCCTGTCATGGATTTGTTGGGCC...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGACTGGGATCCATACAGTaGAAGAATGGAGTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: PWIHRHERVISRPGEGKGLGSIQ*KNGVFR
Trigger: TCTAAAGACTCCATTCTTTCACTGTATGGATCCCAG...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTGTGGGATATGCCATCTaGGCGGGAGCCATGAACATT +
Preference number: 4 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLVGYAI*AGAMNI
Trigger: AATGTTCATGGCTCCCGCTCAGATGGCATATCCCAC...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTGTGGGATATGCCATCTaGGCGGGAGCCATGAACATT +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTVGYAI*AGAMNI
Trigger: AATGTTCATGGCTCCCGCTCAGATGGCATATCCCAC...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACACCCCAAATGACTTATTaGGCAATTTCTAAACCAAAC +
Preference number: 4 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTPQMTY*AISKPN
Trigger: GTTTGGTTTAGAAATTGCTCAATAAGTCATTTGGGG...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGAAATTTTCAAGTGGGGTaGACAATGACTGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGNFQVG*TMTERK
Trigger: TTTCCTCTCAGTCATTGTTCACCCCACTTGAAAATT...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGAATTTTCAAGTGGGGTaGACAATGACTGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTNFQVG*TMTERK
Trigger: TTTCCTCTCAGTCATTGTTCACCCCACTTGAAAATT...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAATTTACCCTGGATATGTaGACCCCCAGATTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: HKATERSSCLGSGWAGCQFTLDM*TPRFLW
Trigger: CCACAGGAATCTGGGGGTGCACATATCCAGGGTAAA...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGACCTTCTCTAGGGTATTaGTGGTCTTACTATTTGCAA +
Preference number: 4 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGPSLGY*WSYYLQ
Trigger: TTGCAAATAGTAAGACCAGCAATACCCTAGAGAAGG...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCCTATTTCTTCTGATTTaGTCCCTGGCTCCGGAAACA +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPALFLLI*SLAPET
Trigger: TGTTTCCGGAGCCAGGGAGCAAATCAGAAGAAATAG...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGCAAAACATCTTTTTGTaGAAATCTTGCTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTQNIFL*KSCSAH
Trigger: GTGGGCAGAGCAAGATTTGCACAAAAAGATGTTTTG...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614549.4
CDS-3UTR CCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGTCTCTAGGGTATTGCTaGTCTTACTATTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTSLGYC*SYYLQW
Trigger: CCATTGCAAATAGTAAGACCAGCAATACCCTAGAGA...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTAACCATGCCTACTGGTaGAGGCATCATGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTNHAYW*RHHAPH
Trigger: ATGGGGAGCATGATGCCTCCACCAGTAGGCATGGTT...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTAGCAACCATGCCTACTaGTGGAGGCATCATGCTCCC +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCSNHAY*WRHHAP
Trigger: GGGAGCATGATGCCTCCACCAGTAGGCATGGTTGCT...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTACCCCATACACAGTCTaGGGCATAGCTGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCTPYTV*GIAAMP
Trigger: AGGCATGGCAGCTATGCCCCAGACTGTGTATGGGGT...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAAGAGGTCTTCATGTTTaGGAAGTGGCTGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: HKATERSSCLGSGWAGCQRGLHV*EVAGQD
Trigger: ATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCT...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp AAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCACGTTGGGATGGCTATaGGGCATGTACAACATAAAG +
Preference number: 4 (lower is better)
Translates to: KQQRGLHVWEVAGQDAKPTLGWL*GMYNIK
Trigger: CTTTATGTTGTACATGCCCCATAGCCATCCCAACGT...GGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAACTGGTCGAGGTTAACTaGCTTTACCCTGGATATGTG +
Preference number: 4 (lower is better)
Translates to: HKATERSSCLGSGWAGCQLVEVN*LYPGYV
Trigger: CACATATCCAGGGTAAAGTCAGTTAACCTCGACCAG...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCATTTCCGCCACTCATTaGCTGTCCATAGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPAISATH*LSIVHH
Trigger: ATGATGAACTATGGACAGTCAATGAGTGGCGGAAAT...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTGGTGCTAATAAAGGCTaGCTGAAGCAGCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTGANKG*LKQQVL
Trigger: CAGGACTTGCTGCTTCAGTCAGCCTTTATTAGCACC...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTACAGGCATGAAAGAGTaGTCAGCAGACCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCTGMKE*SADREK
Trigger: CTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGT...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGATATCCCTCCATTCTCTaGTTCACTGAAAAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: PWIHRHERVISRPGEGKGYPSIL*FTEKEE
Trigger: TTCTTCCTTTTCAGTGAATCAGAGAATGGAGGGATA...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539317.2
CDS-3UTR GCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGCTATTTCTTCTGATTTaGTCCCTGGCTCCGGAAACA +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQELFLLI*SLAPET
Trigger: TGTTTCCGGAGCCAGGGAGCAAATCAGAAGAAATAG...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp AAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCGTCCATAGTTCATCATaGCATTGGCTCCATAGAAGT +
Preference number: 4 (lower is better)
Translates to: KQQRGLHVWEVAGQDAKPVHSSS*HWLHRS
Trigger: ACTTCTATGGAGCCAATGGCATGATGAACTATGGAC...GGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTGAGAGTCTGATTTGCTaGCTGTCCATTTCCGCCACT +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTESLIC*LSISAT
Trigger: AGTGGCGGAAATGGACAGGCAGCAAATCAGACTCTC...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTACTGAGAGTCTGATTTaGTGCCTGTCCATTTCCGCC +
Preference number: 4 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLTESLI*CLSISA
Trigger: GGCGGAAATGGACAGGCAGCAAATCAGACTCTCAGT...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTAGTGGCTGGGCAGGATaGCAAACCCCAAATGACTTA +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTSGWAG*QTPNDL
Trigger: TAAGTCATTTGGGGTTTGGCATCCTGCCCAGCCACT...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTCAACAACTTCTAAGGTaGTGGTGCCAGGAGAGGACT +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTQQLLR*WCQERT
Trigger: AGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTG...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp AAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCAGTTTAAGTGCCTTCTaGCAACAACTTCTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: KQQRGLHVWEVAGQDAKPSLSAF*QQLLRC
Trigger: GCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACT...GGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTAAATCCTTCAACAGCTaGGTCTATCTGAGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTKSFNS*VYLRSP
Trigger: CGGCGACCTCAGATAGACCCAGCTGTTGAAGGATTT...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGATCTCTAGGGTATTGCTaGTCTTACTATTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: PWIHRHERVISRPGEGKGSLGYC*SYYLQW
Trigger: CCATTGCAAATAGTAAGACCAGCAATACCCTAGAGA...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTAACCATGCCTACTGGTaGAGGCATCATGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCNHAYW*RHHAPH
Trigger: ATGGGGAGCATGATGCCTCCACCAGTAGGCATGGTT...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTTTCATGTTTGGGAAGTaGCTGGGCAGGATGCCAAAC +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTFMFGK*LGRMPN
Trigger: GTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAA...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTAGAGGTCTTCATGTTTaGGAAGTGGCTGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLRGLHV*EVAGQD
Trigger: ATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCT...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGATGTGTGTCTGTGTGTaGGATCTTCATAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTMCVCV*DLHKVF
Trigger: AAAGACTTTATGAAGATCCCACACACAGACACACAT...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTGGCAGCCAGGAACTGTaGTTCCCACACATGAAATCT +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTGSQEL*FPHMKS
Trigger: AGATTTCATGTGTGGGAACCACAGTTCCTGGCTGCC...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTTCCACATCTGAGGACTaGGAGTCTGATTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCSTSED*ESDLLP
Trigger: AGGCAGCAAATCAGACTCTCAGTCCTCAGATGTGGA...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTCTGGATACACAGGCATaGAAGAGTGATCAGCAGACC +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCLDTQA*KSDQQT
Trigger: GGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAG...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTAAGTGGGGTGAACAATaGCTGAGAGGAAAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCKWGEQ*LRGKLS
Trigger: GGACAGCTTTCCTCTCAGTCATTGTTCACCCCACTT...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTTTTACCCTGGATATGTaGACCCCCAGATTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCFTLDM*TPRFLW
Trigger: CCACAGGAATCTGGGGGTGCACATATCCAGGGTAAA...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAACTATTTCTTCTGATTTaGTCCCTGGCTCCGGAAACA +
Preference number: 4 (lower is better)
Translates to: HKATERSSCLGSGWAGCQLFLLI*SLAPET
Trigger: TGTTTCCGGAGCCAGGGAGCAAATCAGAAGAAATAG...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGGTCCATAGTTCATCATaGCATTGGCTCCATAGAAGT +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQEVHSSS*HWLHRS
Trigger: ACTTCTATGGAGCCAATGGCATGATGAACTATGGAC...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTAGTGGCTGGGCAGGATaGCAAACCCCAAATGACTTA +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCSGWAG*QTPNDL
Trigger: TAAGTCATTTGGGGTTTGGCATCCTGCCCAGCCACT...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTCAACAACTTCTAAGGTaGTGGTGCCAGGAGAGGACT +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCQQLLR*WCQERT
Trigger: AGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTG...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAATCTTACTATTTGCAATaGAGCAGGCCACAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: HKATERSSCLGSGWAGCQSYYLQ*SRPQEH
Trigger: ATGCTCCTGTGGCCTGCTCCATTGCAAATAGTAAGA...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTAACCTACAACCTTTCTaGAACCGGAAGAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTNLQPF*NRKKKG
Trigger: CCCCTTCTTCTTCCGGTTCCAGAAAGGTTGTAGGTT...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACGTTGGGATGGCTATaGGGCATGTACAACATAAAG +
Preference number: 4 (lower is better)
Translates to: HKATERSSCLGSGWAGCQTLGWL*GMYNIK
Trigger: CTTTATGTTGTACATGCCCCATAGCCATCCCAACGT...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTGGCAGCCAGGAACTGTaGTTCCCACACATGAAATCT +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCGSQEL*FPHMKS
Trigger: AGATTTCATGTGTGGGAACCACAGTTCCTGGCTGCC...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAATTTCCGCCACTCATTaGCTGTCCATAGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: HKATERSSCLGSGWAGCQISATH*LSIVHH
Trigger: ATGATGAACTATGGACAGTCAATGAGTGGCGGAAAT...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAATTTTCAAGTGGGGTaGACAATGACTGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQENFQVG*TMTERK
Trigger: TTTCCTCTCAGTCATTGTTCACCCCACTTGAAAATT...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp AAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCTGTGGTTCCCACACATaGAATCTTTTAAGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: KQQRGLHVWEVAGQDAKPCGSHT*NLLSKV
Trigger: AACTTTGCTTAAAAGATTTCATGTGTGGGAACCACA...GGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTGGGAGCCATGAACATTaGTTGAGTAGGCATTTGAGG +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCGSHEH*LSRHLR
Trigger: CCTCAAATGCCTACTCAAGCAATGTTCATGGCTCCC...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCTCCCACAGTTTAAGTaGCTTCTGCCAACAACTTCT +
Preference number: 4 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLLPQFK*LLPTTS
Trigger: AGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGAG...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTGTACACGTTAAGCTCTaGATTCCCACTATAGGGGTT +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTVHVKL*IPTIGV
Trigger: AACCCCTATAGTGGGAATGCAGAGCTTAACGTGTAC...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTTACTATTTGCAATaGAGCAGGCCACAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTSYYLQ*SRPQEH
Trigger: ATGCTCCTGTGGCCTGCTCCATTGCAAATAGTAAGA...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
3UTR CAA 72 bp CATGTACAACATAAAGCAACAGAGAGGTCTTCATGTTaGGGAAGTGGCTGGGCAGGATGCCAAACCCCAAAT +
Preference number: 4 (lower is better)
Translates to: HVQHKATERSSC*GSGWAGCQTPN
Trigger: ATTTGGGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATGTTGTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTCTGGGATCCATACAGTaGAAGAATGGAGTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTLGSIQ*KNGVFR
Trigger: TCTAAAGACTCCATTCTTTCACTGTATGGATCCCAG...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGTGTGGTTCCCACACATaGAATCTTTTAAGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQECGSHT*NLLSKV
Trigger: AACTTTGCTTAAAAGATTTCATGTGTGGGAACCACA...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR GCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTCTCCCACAGTTTAAGTaGCTTCTGCCAACAACTTCT +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCLPQFK*LLPTTS
Trigger: AGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGAG...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR TCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTCTGGGATCCATACAGTaGAAGAATGGAGTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCLGSIQ*KNGVFR
Trigger: TCTAAAGACTCCATTCTTTCACTGTATGGATCCCAG...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTAGTTCATCATGCCATTaGCTCCATAGAAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: VGMAMGHVQHKATERSSCSSSCH*LHRSSS
Trigger: GGATGAACTTCTATGGAGCCAATGGCATGATGAACT...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAATGTGTGTCTGTGTGTaGGATCTTCATAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: HKATERSSCLGSGWAGCQMCVCV*DLHKVF
Trigger: AAAGACTTTATGAAGATCCCACACACAGACACACAT...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CCA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTATGTGTGTCTGTGTGTaGGATCTTCATAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLMCVCV*DLHKVF
Trigger: AAAGACTTTATGAAGATCCCACACACAGACACACAT...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS GCA 90 bp GCGCCCCTTGGCGGGCTTAGGGACAGGCCCGCCTCCAAGAGAGGCTaGGGGGCCAGAGACCCTCAGCCCAGGCAAAGGCGGACCACGAGC +
Preference number: 5 (lower is better)
Translates to: APLGGLRDRPASKRG*GARDPQPRQRRTTS
Trigger: GCTCGTGGTCCGCCTTTGCCTGGGCTGAGGGTCTCTGGCCCCGCAGCCTCTCTTGGAGGCGGGCCTGTCCCTAAGCCCGCCAAGGGGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS GCA 90 bp GGTACCGATCCACGTCCTTCACCGACTTGCCTGTCATGGCCAGGGTaGCGGCGGGGGCAGAGGGCGACGCGCCCTCCTCGCCCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: GTDPRPSPTCLSWPG*RRGQRATRPPRPQR
Trigger: TCTCTGGGGGCGAGGAGGGCGCGTCGCCCTCTGCCCCCGCCGGCACCCTGGCCATGACAGGCAAGTCGGTGAAGGACGTGGATCGGTACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS CCA 90 bp GGGCCAGAGACCCTCAGCCCAGGCAAAGGCGGACCACGAGCCTCCTaGGTGCCGGACGCAGATGACCCTCTGGCCGGCCTGTCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: GPETLSPGKGGPRAS*VPDADDPLAGLSAG
Trigger: GCCAGCAGACAGGCCGGCCAGAGGGTCATCTGCGTCCGGCACCCAGGAGGCTCGTGGTCCGCCTTTGCCTGGGCTGAGGGTCTCTGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS CCA 90 bp GGACAGCCTGGTACCGATCCACGTCCTTCACCGACTTGCCTGTCATaGCCAGGGTGCCGGCGGGGGCAGAGGGCGACGCGCCCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: GQPGTDPRPSPTCLS*PGCRRGQRATRPPR
Trigger: GCGAGGAGGGCGCGTCGCCCTCTGCCCCCGCCGGCACCCTGGCCATGACAGGCAAGTCGGTGAAGGACGTGGATCGGTACCAGGCTGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS GCA 90 bp GGTTGGCCAGGACAGCCTGGTACCGATCCACGTCCTTCACCGACTTaGCTGTCATGGCCAGGGTGCCGGCGGGGGCAGAGGGCGACGCGC +
Preference number: 5 (lower is better)
Translates to: GWPGQPGTDPRPSPT*LSWPGCRRGQRATR
Trigger: GCGCGTCGCCCTCTGCCCCCGCCGGCACCCTGGCCATGACAGGCAAGTCGGTGAAGGACGTGGATCGGTACCAGGCTGTCCTGGCCAACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS GCA 90 bp CAGAGACCCTCAGCCCAGGCAAAGGCGGACCACGAGCCTCCTGGGTaGCGGACGCAGATGACCCTCTGGCCGGCCTGTCTGCTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: QRPSAQAKADHEPPG*RTQMTLWPACLLAL
Trigger: CAAGGCCAGCAGACAGGCCGGCCAGAGGGTCATCTGCGTCCGGCACCCAGGAGGCTCGTGGTCCGCCTTTGCCTGGGCTGAGGGTCTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR CAA 90 bp TGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGGACTGGGGAGGATCGGCGCGGCGCCCCTaGGCGGGCTTAGGGACAGGC +
Preference number: 5 (lower is better)
Translates to: CLLPTTSKVLVPGEDWGGSARRP*AGLGTG
Trigger: GCCTGTCCCTAAGCCCGCCAAGGGGCGCCGCGCCGA...TCCTCCCCAGTCCTCTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR CAA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGGCCTGTCTGCTGGCCTaGCGTCCCGCGCCTCGGTTT +
Preference number: 5 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGACLLA*RPAPRF
Trigger: AAACCGAGGCGCGGGACGCAAGGCCAGCAGACAGGC...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR CAA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGGGACTGGGGAGGACGTaGGGATGGCTATGGGGCATG +
Preference number: 5 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGGLGRT*GWLWGM
Trigger: CATGCCCCATAGCCATCCCAACGTCCTCCCCAGTCC...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACGGACTGGGGAGGACGTaGGGATGGCTATGGGGCATG +
Preference number: 5 (lower is better)
Translates to: PSASYTWERWGNRAPWIHGLGRT*GWLWGM
Trigger: CATGCCCCATAGCCATCCCAACGTCCTCCCCAGTCC...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS GCA 90 bp CAGCTGCTGAGCTGGCTGGACCCCATACACAGTCTGGGGCATAGCTaGCATGCCTGCCATGTAGCCAGCCTGCTGGGTGGTCATCATTCC +
Preference number: 5 (lower is better)
Translates to: QLLSWLDPIHSLGHS*HACHVASLLGGHHS
Trigger: GGAATGATGACCACCCAGCAGGCTGGCTACATGGCAGGCATGGCAGCTATGCCCCAGACTGTGTATGGGGTCCAGCCAGCTCAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGAGAGGTCTTCATGTTaGGGAAGTGGCTGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPERSSC*GSGWAG
Trigger: TCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTC...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATGAGAGGTCTTCATGTTaGGGAAGTGGCTGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDERSSC*GSGWAG
Trigger: TCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTC...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS TCA 90 bp CCTGCAGGCATGGCCATGGGGGCAACCATCCCAGAAGCTCCTGGCTaGGCAACCATGCCTACTGGTGGAGGCATCATGCTCCCCATTATG +
Preference number: 5 (lower is better)
Translates to: PAGMAMGATIPEAPG*ATMPTGGGIMLPIM
Trigger: CATAATGGGGAGCATGATGCCTCCACCAGTAGGCATGGTTGCTCAGCCAGGAGCTTCTGGGATGGTTGCCCCCATGGCCATGCCTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS GCA 90 bp AGCTGGCTGGACCCCATACACAGTCTGGGGCATAGCTGCCATGCCTaGCATGTAGCCAGCCTGCTGGGTGGTCATCATTCCATTCGGCAC +
Preference number: 5 (lower is better)
Translates to: SWLDPIHSLGHSCHA*HVASLLGGHHSIRH
Trigger: GTGCCGAATGGAATGATGACCACCCAGCAGGCTGGCTACATGGCAGGCATGGCAGCTATGCCCCAGACTGTGTATGGGGTCCAGCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CCA 90 bp ATAGCCTGCAGGCATGGCCATGGGGGCAACCATCCCAGAAGCTCCTaGCTGAGCAACCATGCCTACTGGTGGAGGCATCATGCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: IACRHGHGGNHPRSS*LSNHAYWWRHHAPH
Trigger: ATGGGGAGCATGATGCCTCCACCAGTAGGCATGGTTGCTCAGCCAGGAGCTTCTGGGATGGTTGCCCCCATGGCCATGCCTGCAGGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACTCGGCACACCCATCATaGATGCCTGCATGCCACCCA +
Preference number: 5 (lower is better)
Translates to: PSASYTWERWGNRAPWIHSAHPS*MPACHP
Trigger: TGGGTGGCATGCAGGCATCAATGATGGGTGTGCCGA...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS TCA 90 bp GCCAGCCTGCTGGGTGGTCATCATTCCATTCGGCACACCCATCATTaGTGCCTGCATGCCACCCATATAGCCTGCAGGCATGGCCATGGG +
Preference number: 5 (lower is better)
Translates to: ASLLGGHHSIRHTHH*CLHATHIACRHGHG
Trigger: CCCATGGCCATGCCTGCAGGCTATATGGGTGGCATGCAGGCATCAATGATGGGTGTGCCGAATGGAATGATGACCACCCAGCAGGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACACGGCACTCCCTGCAGTaGGCATGGAACCTACAACCT +
Preference number: 5 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTRHSLQ*AWNLQP
Trigger: AGGTTGTAGGTTCCATGCCAACTGCAGGGAGTGCCG...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTTGCTTGAGTAGGCATTaGAGGCGTCTGGGATCCATA +
Preference number: 5 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPCLSRH*RRLGSI
Trigger: TATGGATCCCAGACGCCTCAAATGCCTACTCAAGCA...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGCTGAGTAAGGTTCCATaGCAGCTGCTGAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRLSKVP*QLLSWL
Trigger: CAGCCAGCTCAGCAGCTGCAATGGAACCTTACTCAG...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CCA 90 bp TCATTGATGCCTGCATGCCACCCATATAGCCTGCAGGCATGGCCATaGGGGCAACCATCCCAGAAGCTCCTGGCTGAGCAACCATGCCTA +
Preference number: 5 (lower is better)
Translates to: SLMPACHPYSLQAWP*GQPSQKLLAEQPCL
Trigger: TAGGCATGGTTGCTCAGCCAGGAGCTTCTGGGATGGTTGCCCCCATGGCCATGCCTGCAGGCTATATGGGTGGCATGCAGGCATCAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CCA 90 bp CATCTGCTGGGTCATCTGAGTAAGGTTCCATTGCAGCTGCTGAGCTaGCTGGACCCCATACACAGTCTGGGGCATAGCTGCCATGCCTGC +
Preference number: 5 (lower is better)
Translates to: HLLGHLSKVPLQLLS*LDPIHSLGHSCHAC
Trigger: GCAGGCATGGCAGCTATGCCCCAGACTGTGTATGGGGTCCAGCCAGCTCAGCAGCTGCAATGGAACCTTACTCAGATGACCCAGCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATAGCCATGAACATTGCTaGAGTAGGCATTTGAGGCGT +
Preference number: 5 (lower is better)
Translates to: PALCLVHLGTVGKQSTLDSHEHC*SRHLRR
Trigger: ACGCCTCAAATGCCTACTCAAGCAATGTTCATGGCT...ATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CCA 90 bp GGCAACCATCCCAGAAGCTCCTGGCTGAGCAACCATGCCTACTGGTaGAGGCATCATGCTCCCCATTATGCTGTTAGGAGGTGTAACCCC +
Preference number: 5 (lower is better)
Translates to: GNHPRSSWLSNHAYW*RHHAPHYAVRRCNP
Trigger: GGGGTTACACCTCCTAACAGCATAATGGGGAGCATGATGCCTCCACCAGTAGGCATGGTTGCTCAGCCAGGAGCTTCTGGGATGGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CCA 90 bp GGGGGCAACCATCCCAGAAGCTCCTGGCTGAGCAACCATGCCTACTaGTGGAGGCATCATGCTCCCCATTATGCTGTTAGGAGGTGTAAC +
Preference number: 5 (lower is better)
Translates to: GGNHPRSSWLSNHAY*WRHHAPHYAVRRCN
Trigger: GTTACACCTCCTAACAGCATAATGGGGAGCATGATGCCTCCACCAGTAGGCATGGTTGCTCAGCCAGGAGCTTCTGGGATGGTTGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACTGCTGGTCTTACTATTaGCAATGGAGCAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: PSASYTWERWGNRAPWIHCWSYY*QWSRPQ
Trigger: CTGTGGCCTGCTCCATTGCAAATAGTAAGACCAGCA...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGACGGCACTCCCTGCAGTaGGCATGGAACCTACAACCT +
Preference number: 5 (lower is better)
Translates to: PWIHRHERVISRPGEGKGRHSLQ*AWNLQP
Trigger: AGGTTGTAGGTTCCATGCCAACTGCAGGGAGTGCCG...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGTGCTTGAGTAGGCATTaGAGGCGTCTGGGATCCATA +
Preference number: 5 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRCLSRH*RRLGSI
Trigger: TATGGATCCCAGACGCCTCAAATGCCTACTCAAGCA...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGATCGGCACACCCATCATaGATGCCTGCATGCCACCCA +
Preference number: 5 (lower is better)
Translates to: PWIHRHERVISRPGEGKGSAHPS*MPACHP
Trigger: TGGGTGGCATGCAGGCATCAATGATGGGTGTGCCGA...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp ATGGGGAGAGGGTGGGAGGCGGAACACACACTCATACACACACACACACTCACGCTGAGTAAGGTTCCATaGCAGCTGCTGAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: MGRGWEAEHTLIHTHTLTLSKVP*QLLSWL
Trigger: CAGCCAGCTCAGCAGCTGCAATGGAACCTTACTCAG...CGTGAGTGTGTGTGTGTGTATGAGTGTGTGTTCCGCCTCCCACCCTCTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTCATTTCCGCCACTCATaGACTGTCCATAGTTCATCA +
Preference number: 5 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPHFRHS*TVHSSS
Trigger: TGATGAACTATGGACAGTCAATGAGTGGCGGAAATG...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGACAGGAGCTTTAACCTaGAGGGAAGGGACTCAAAGG +
Preference number: 5 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGTGALT*REGTQR
Trigger: CCTTTGAGTCCCTTCCCTCAAGGTTAAAGCTCCTGT...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACACAGGAGCTTTAACCTaGAGGGAAGGGACTCAAAGG +
Preference number: 5 (lower is better)
Translates to: PSASYTWERWGNRAPWIHTGALT*REGTQR
Trigger: CCTTTGAGTCCCTTCCCTCAAGGTTAAAGCTCCTGT...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAACTCATAGGAGGGGGCTaGCCTCACCCCAGGGCTAGG +
Preference number: 5 (lower is better)
Translates to: HKATERSSCLGSGWAGCQLIGGG*PHPRAR
Trigger: CCTAGCCCTGGGGTGAGGCAAGCCCCCTCCTATGAG...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTTGCCTCAGTCCGGGGTaGAGGACTCCCGGTCCCCCG +
Preference number: 5 (lower is better)
Translates to: VGMAMGHVQHKATERSSCCLSPG*RTPGPP
Trigger: CGGGGGACCGGGAGTCCTCAACCCCGGACTGAGGCA...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS GCA 90 bp TCCAAGAGGCCCATCGCGGCCCATAGATTTCAAAATCTTGCCTCCTaGGCTGGCTGTGTTCCATTGGCTTCCACATCCTCTCTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: SKRPIAAHRFQNLAS*AGCVPLASTSSLSP
Trigger: AGGGCTGAGAGAGGATGTGGAAGCCAATGGAACACAGCCAGCGCAGGAGGCAAGATTTTGAAATCTATGGGCCGCGATGGGCCTCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435168.6
CDS-3UTR CAA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACATGCTGGTCTTACTATTaGCAATGGAGCAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTCWSYY*QWSRPQ
Trigger: CTGTGGCCTGCTCCATTGCAAATAGTAAGACCAGCA...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACATGCTTGAGTAGGCATTaGAGGCGTCTGGGATCCATA +
Preference number: 5 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTCLSRH*RRLGSI
Trigger: TATGGATCCCAGACGCCTCAAATGCCTACTCAAGCA...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCTCGGCACACCCATCATaGATGCCTGCATGCCACCCA +
Preference number: 5 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPASAHPS*MPACHP
Trigger: TGGGTGGCATGCAGGCATCAATGATGGGTGTGCCGA...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGACTGAGTAAGGTTCCATaGCAGCTGCTGAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: PWIHRHERVISRPGEGKGLSKVP*QLLSWL
Trigger: CAGCCAGCTCAGCAGCTGCAATGGAACCTTACTCAG...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCTCATAGGAGGGGGCTaGCCTCACCCCAGGGCTAGG +
Preference number: 5 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLLIGGG*PHPRAR
Trigger: CCTAGCCCTGGGGTGAGGCAAGCCCCCTCCTATGAG...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp TGTCCCGGCCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTAAGAGAGTAGTATTTTaGCTCATCCTCATAGGAGGG +
Preference number: 5 (lower is better)
Translates to: CPGPLPRTPGNGGETEHPKRVVF*LILIGG
Trigger: CCCTCCTATGAGGATGAGCAAAAATACTACTCTCTT...AGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGGCCGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGACGTCCTTCACCGACTaGCCTGTCATGGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQETSFTD*PVMARV
Trigger: CACCCTGGCCATGACAGGCAAGTCGGTGAAGGACGT...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR CAA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCGAGAGGTCTTCATGTTaGGGAAGTGGCTGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPAERSSC*GSGWAG
Trigger: TCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTC...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTGGACTGGGGAGGACGTaGGGATGGCTATGGGGCATG +
Preference number: 5 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLGLGRT*GWLWGM
Trigger: CATGCCCCATAGCCATCCCAACGTCCTCCCCAGTCC...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTCTCATAGGAGGGGGCTaGCCTCACCCCAGGGCTAGG +
Preference number: 5 (lower is better)
Translates to: VGMAMGHVQHKATERSSCLIGGG*PHPRAR
Trigger: CCTAGCCCTGGGGTGAGGCAAGCCCCCTCCTATGAG...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGCTTCATAAAGTCGGTTaGCCTTTCCATTTCCCATCT +
Preference number: 5 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRLHKVG*PFHFPS
Trigger: AGATGGGAAATGGAAAGGCAAACCGACTTTATGAAG...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGATGCTGGTCTTACTATTaGCAATGGAGCAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: PWIHRHERVISRPGEGKGCWSYY*QWSRPQ
Trigger: CTGTGGCCTGCTCCATTGCAAATAGTAAGACCAGCA...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGTCCTTCTCTAGGGTATaGCTGGTCTTACTATTTGCA +
Preference number: 5 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRSFSRV*LVLLFA
Trigger: TGCAAATAGTAAGACCAGCAATACCCTAGAGAAGGA...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGAAGAGAGTAGTATTTTaGCTCATCCTCATAGGAGGG +
Preference number: 5 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRKRVVF*LILIGG
Trigger: CCCTCCTATGAGGATGAGCAAAAATACTACTCTCTT...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACAAGAGAGTAGTATTTTaGCTCATCCTCATAGGAGGG +
Preference number: 5 (lower is better)
Translates to: PSASYTWERWGNRAPWIHKRVVF*LILIGG
Trigger: CCCTCCTATGAGGATGAGCAAAAATACTACTCTCTT...GTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp ACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGGGGAAGAGAGTAGTATTTTaGCTCATCCTCATAGGAGGG +
Preference number: 5 (lower is better)
Translates to: TIGVGPPATEPDPTEGRGKRVVF*LILIGG
Trigger: CCCTCCTATGAGGATGAGCAAAAATACTACTCTCTT...CCCCCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS GCA 90 bp CTCCGGAAACAGGTTCAGATTTTCAGGAACAGAGCCGGCACTCCCTaGAGTTGGCATGGAACCTACAACCTTTCTGGAACCGGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: LRKQVQIFRNRAGTP*SWHGTYNLSGTGRR
Trigger: TCTTCTTCCGGTTCCAGAAAGGTTGTAGGTTCCATGCCAACTGCAGGGAGTGCCGGCTCTGTTCCTGAAAATCTGAACCTGTTTCCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCTGCTGGTCTTACTATTaGCAATGGAGCAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPACWSYY*QWSRPQ
Trigger: CTGTGGCCTGCTCCATTGCAAATAGTAAGACCAGCA...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCTCTGCCTCGTACACCTGGGAACGGTGGGGAAACAGAGCACCCTGGATACACATCCTTCTCTAGGGTATaGCTGGTCTTACTATTTGCA +
Preference number: 5 (lower is better)
Translates to: PLPRTPGNGGETEHPGYTSFSRV*LVLLFA
Trigger: TGCAAATAGTAAGACCAGCAATACCCTAGAGAAGGA...TGTGTATCCAGGGTGCTCTGTTTCCCCACCGTTCCCAGGTGTACGAGGCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGAAGCCATGAACATTGCTaGAGTAGGCATTTGAGGCGT +
Preference number: 5 (lower is better)
Translates to: PWIHRHERVISRPGEGKGSHEHC*SRHLRR
Trigger: ACGCCTCAAATGCCTACTCAAGCAATGTTCATGGCT...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCGGCACACCCATCATaGATGCCTGCATGCCACCCA +
Preference number: 5 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTSAHPS*MPACHP
Trigger: TGGGTGGCATGCAGGCATCAATGATGGGTGTGCCGA...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAGAGAGGTCTTCATGTTaGGGAAGTGGCTGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: HKATERSSCLGSGWAGCQERSSC*GSGWAG
Trigger: TCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTC...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCTGGATACACAGGCATGAAAGAGTGATCAGCAGACCGGGAGAAGGGAAGGGACTTTTTGTGCAAATCTaGCTCTGCCCACTTTCCCCA +
Preference number: 5 (lower is better)
Translates to: PWIHRHERVISRPGEGKGLFVQI*LCPLSP
Trigger: TGGGGAAAGTGGGCAGAGCAAGATTTGCACAAAAAG...TCCCTTCCCTTCTCCCGGTCTGCTGATCACTCTTTCATGCCTGTGTATCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614549.4
CDS-3UTR CAA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTCGGCACTCCCTGCAGTaGGCATGGAACCTACAACCT +
Preference number: 5 (lower is better)
Translates to: VGMAMGHVQHKATERSSCRHSLQ*AWNLQP
Trigger: AGGTTGTAGGTTCCATGCCAACTGCAGGGAGTGCCG...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTCTGAGTAAGGTTCCATaGCAGCTGCTGAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTLSKVP*QLLSWL
Trigger: CAGCCAGCTCAGCAGCTGCAATGGAACCTTACTCAG...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CCCACTATAGGGGTTGGTCCTCCAGCCACGGAGCCAGATCCTACTGAAGGCAGGATCTTCATAAAGTCTTaGGTGCTAATAAAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: PTIGVGPPATEPDPTEGRIFIKS*VLIKAD
Trigger: GTCAGCCTTTATTAGCACCAAAGACTTTATGAAGAT...CCTGCCTTCAGTAGGATCTGGCTCCGTGGCTGGAGGACCAACCCCTATAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAATGCTTGAGTAGGCATTaGAGGCGTCTGGGATCCATA +
Preference number: 5 (lower is better)
Translates to: HKATERSSCLGSGWAGCQCLSRH*RRLGSI
Trigger: TATGGATCCCAGACGCCTCAAATGCCTACTCAAGCA...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGAGCCATGAACATTGCTaGAGTAGGCATTTGAGGCGT +
Preference number: 5 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQESHEHC*SRHLRR
Trigger: ACGCCTCAAATGCCTACTCAAGCAATGTTCATGGCT...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CATAAAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACAGGAGCTTTAACCTaGAGGGAAGGGACTCAAAGG +
Preference number: 5 (lower is better)
Translates to: HKATERSSCLGSGWAGCQTGALT*REGTQR
Trigger: CCTTTGAGTCCCTTCCCTCAAGGTTAAAGCTCCTGT...TTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS TCA 90 bp GATAGATGGCATCAACCTGGCTTCTCTGCACACCAGCTGGAGTTGTaGCAGTTGTGGCTCAAAACGTTGCTTTCTGAGCTAGGAATGAAC +
Preference number: 5 (lower is better)
Translates to: DRWHQPGFSAHQLEL*QLWLKTLLSELGMN
Trigger: GTTCATTCCTAGCTCAGAAAGCAACGTTTTGAGCCACAACTGTCACAACTCCAGCTGGTGTGCAGAGAAGCCAGGTTGATGCCATCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435168.6
CDS TCA 90 bp TGTTCCATTGGCTTCCACATCCTCTCTCAGCCCTTCAACTGGCTCTaGGGTCTAAGAGACAACTTTGATAGATGGCATCAACCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: CSIGFHILSQPFNWL*GLRDNFDRWHQPGF
Trigger: GAAGCCAGGTTGATGCCATCTATCAAAGTTGTCTCTTAGACCTCAGAGCCAGTTGAAGGGCTGAGAGAGGATGTGGAAGCCAATGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435168.6
CDS-3UTR CAA 90 bp AAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCCTTCATAAAGTCGGTTaGCCTTTCCATTTCCCATCT +
Preference number: 5 (lower is better)
Translates to: KQQRGLHVWEVAGQDAKPLHKVG*PFHFPS
Trigger: AGATGGGAAATGGAAAGGCAAACCGACTTTATGAAG...GGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGCATTTCCGCCACTCATaGACTGTCCATAGTTCATCA +
Preference number: 5 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQEHFRHS*TVHSSS
Trigger: TGATGAACTATGGACAGTCAATGAGTGGCGGAAATG...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS TCA 90 bp GCCCATCGCGGCCCTCAGTTCCACTCATTATATCCCTCCATTCTCTaGTTCACTGAAAAGGAAGAATACACAGAAACACCAGTGGGATCT +
Preference number: 5 (lower is better)
Translates to: AHRGPQFHSLYPSIL*FTEKEEYTETPVGS
Trigger: AGATCCCACTGGTGTTTCTGTGTATTCTTCCTTTTCAGTGAATCAGAGAATGGAGGGATATAATGAGTGGAACTGAGGGCCGCGATGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539317.2
CDS GCA 90 bp GGGATGGAACAGAGGCCAACAGATCTAAATCCTTCTCTAGGGTATTaGTGGTCTTACTATTTGCAATGGAGCAGGCCACAGGAGCATCAA +
Preference number: 5 (lower is better)
Translates to: GMEQRPTDLNPSLGY*WSYYLQWSRPQEHQ
Trigger: TTGATGCTCCTGTGGCCTGCTCCATTGCAAATAGTAAGACCAGCAATACCCTAGAGAAGGATTTAGATCTGTTGGCCTCTGTTCCATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000487871.1
ENST00000539317.2
ENST00000614549.4
CDS CCA 90 bp ATGGAACAGAGGCCAACAGATCTAAATCCTTCTCTAGGGTATTGCTaGTCTTACTATTTGCAATGGAGCAGGCCACAGGAGCATCAAGGC +
Preference number: 5 (lower is better)
Translates to: MEQRPTDLNPSLGYC*SYYLQWSRPQEHQG
Trigger: GCCTTGATGCTCCTGTGGCCTGCTCCATTGCAAATAGTAAGACCAGCAATACCCTAGAGAAGGATTTAGATCTGTTGGCCTCTGTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000487871.1
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGCTTCATAAAGTCGGTTaGCCTTTCCATTTCCCATCT +
Preference number: 5 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQELHKVG*PFHFPS
Trigger: AGATGGGAAATGGAAAGGCAAACCGACTTTATGAAG...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp TCCCACAGTTTAAGTGCCTTCTGCCAACAACTTCTAAGGTGCTGGTGCCAGGAGTCCTTCTCTAGGGTATaGCTGGTCTTACTATTTGCA +
Preference number: 5 (lower is better)
Translates to: SHSLSAFCQQLLRCWCQESFSRV*LVLLFA
Trigger: TGCAAATAGTAAGACCAGCAATACCCTAGAGAAGGA...CTCCTGGCACCAGCACCTTAGAAGTTGTTGGCAGAAGGCACTTAAACTGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp AAGCAACAGAGAGGTCTTCATGTTTGGGAAGTGGCTGGGCAGGATGCCAAACCCTTGCAAAACATCTTTTaGTGCAAATCTTGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: KQQRGLHVWEVAGQDAKPLQNIF*CKSCSA
Trigger: GGCAGAGCAAGATTTGCACAAAAAGATGTTTTGCAA...GGGTTTGGCATCCTGCCCAGCCACTTCCCAAACATGAAGACCTCTCTGTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614549.4
CDS TCA 90 bp AGGACTGAGAGTCTGATTTGCTGCCTGTCCATTTCCGCCACTCATTaGCTGTCCATAGTTCATCATGCCATTGGCTCCATAGAAGTTCAT +
Preference number: 5 (lower is better)
Translates to: RTESLICCLSISATH*LSIVHHAIGSIEVH
Trigger: ATGAACTTCTATGGAGCCAATGGCATGATGAACTATGGACAGTCAATGAGTGGCGGAAATGGACAGGCAGCAAATCAGACTCTCAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTTCTTTCCTAAAGGCATaGATGTCCAGACTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: VGMAMGHVQHKATERSSCSFLKA*MSRLRS
Trigger: GGACCGAAGTCTGGACATCAATGCCTTTAGGAAAGA...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp AGGACGTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATTTCCGCCACTCATaGACTGTCCATAGTTCATCA +
Preference number: 5 (lower is better)
Translates to: RTLGWLWGMYNIKQQRGLHFRHS*TVHSSS
Trigger: TGATGAACTATGGACAGTCAATGAGTGGCGGAAATG...AAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAACGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp CAAGCAGTACACGTTAAGCTCTGCATTCCCACTATAGGGGTTGGTCCTCCAGCCATCTTCATAAAGTCTTaGGTGCTAATAAAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: QAVHVKLCIPTIGVGPPAIFIKS*VLIKAD
Trigger: GTCAGCCTTTATTAGCACCAAAGACTTTATGAAGAT...GGCTGGAGGACCAACCCCTATAGTGGGAATGCAGAGCTTAACGTGTACTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS-3UTR CAA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTCAATCTGCACAAAACTaGTTATCCTCCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VGMAMGHVQHKATERSSCQSAQN*LSSSSS
Trigger: GCTGCTGGAGGAGGATAACAAGTTTTGTGCAGATTG...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS-3UTR CAA 90 bp GACTCAAAGGTGTGCACACTTCTCCCACAGTTTAAGTGCCTTCTGCCAACAACTCTTCATAAAGTCGGTTaGCCTTTCCATTTCCCATCT +
Preference number: 5 (lower is better)
Translates to: DSKVCTLLPQFKCLLPTTLHKVG*PFHFPS
Trigger: AGATGGGAAATGGAAAGGCAAACCGACTTTATGAAG...AGTTGTTGGCAGAAGGCACTTAAACTGTGGGAGAAGTGTGCACACCTTTGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CCA 90 bp TTTGAACTCTTTTCCCATCTCCACTGTAAAGCCACGGTGTTCTTGTaGGTAGGGCTGCTGTTATTCAAAGAGAGTTACCAAAGAAACAAA +
Preference number: 5 (lower is better)
Translates to: FELFSHLHCKATVFL*VGLLLFKESYQRNK
Trigger: TTTGTTTCTTTGGTAACTCTCTTTGAATAACAGCAGCCCTACCCACAAGAACACCGTGGCTTTACAGTGGAGATGGGAAAAGAGTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487871.1
CDS-3UTR CAA 90 bp GTTGGGATGGCTATGGGGCATGTACAACATAAAGCAACAGAGAGGTCTTCATGTATCTTCATAAAGTCTTaGGTGCTAATAAAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: VGMAMGHVQHKATERSSCIFIKS*VLIKAD
Trigger: GTCAGCCTTTATTAGCACCAAAGACTTTATGAAGAT...ACATGAAGACCTCTCTGTTGCTTTATGTTGTACATGCCCCATAGCCATCCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CAA 90 bp GGGTGCCGGACGCAGATGACCCTCTGGCCGGCCTGTCTGCTGGCCTaGCGTCCCGCGCCTCGGTTTCCCTGGCAGCTGCCGTCAGCTCCG +
Preference number: 6 (lower is better)
Translates to: GCRTQMTLWPACLLA*RPAPRFPWQLPSAP
Trigger: CGGAGCTGACGGCAGCTGCCAGGGAAACCGAGGCGCGGGACGCAAGGCCAGCAGACAGGCCGGCCAGAGGGTCATCTGCGTCCGGCACCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS GCA 72 bp GGCGGGCTTAGGGACAGGCCCGCCTCCAAGAGAGGCTaGGGGGCCAGAGACCCTCAGCCCAGGCAAAGGCGG +
Preference number: 6 (lower is better)
Translates to: GGLRDRPASKRG*GARDPQPRQRR
Trigger: CCGCCTTTGCCTGGGCTGAGGGTCTCTGGCCCCGCAGCCTCTCTTGGAGGCGGGCCTGTCCCTAAGCCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS TCA 72 bp AGGCGGACCACGAGCCTCCTGGGTGCCGGACGCAGATaGCCCTCTGGCCGGCCTGTCTGCTGGCCTTGCGTC +
Preference number: 6 (lower is better)
Translates to: RRTTSLLGAGRR*PSGRPVCWPCV
Trigger: GACGCAAGGCCAGCAGACAGGCCGGCCAGAGGGTCATCTGCGTCCGGCACCCAGGAGGCTCGTGGTCCGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS CCA 72 bp ACCCTCAGCCCAGGCAAAGGCGGACCACGAGCCTCCTaGGTGCCGGACGCAGATGACCCTCTGGCCGGCCTG +
Preference number: 6 (lower is better)
Translates to: TLSPGKGGPRAS*VPDADDPLAGL
Trigger: CAGGCCGGCCAGAGGGTCATCTGCGTCCGGCACCCAGGAGGCTCGTGGTCCGCCTTTGCCTGGGCTGAGGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS CCA 72 bp GGTACCGATCCACGTCCTTCACCGACTTGCCTGTCATaGCCAGGGTGCCGGCGGGGGCAGAGGGCGACGCGC +
Preference number: 6 (lower is better)
Translates to: GTDPRPSPTCLS*PGCRRGQRATR
Trigger: GCGCGTCGCCCTCTGCCCCCGCCGGCACCCTGGCCATGACAGGCAAGTCGGTGAAGGACGTGGATCGGTACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS CAA 72 bp ACGCAGATGACCCTCTGGCCGGCCTGTCTGCTGGCCTaGCGTCCCGCGCCTCGGTTTCCCTGGCAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: TQMTLWPACLLA*RPAPRFPWQLP
Trigger: CGGCAGCTGCCAGGGAAACCGAGGCGCGGGACGCAAGGCCAGCAGACAGGCCGGCCAGAGGGTCATCTGCGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS CAA 90 bp AGGTTGGCCAGGACAGCCTGGTACCGATCCACGTCCTTCACCGACTaGCCTGTCATGGCCAGGGTGCCGGCGGGGGCAGAGGGCGACGCG +
Preference number: 6 (lower is better)
Translates to: RLARTAWYRSTSFTD*PVMARVPAGAEGDA
Trigger: CGCGTCGCCCTCTGCCCCCGCCGGCACCCTGGCCATGACAGGCAAGTCGGTGAAGGACGTGGATCGGTACCAGGCTGTCCTGGCCAACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS GCA 72 bp AGCTGGCTGGACCCCATACACAGTCTGGGGCATAGCTaGCATGCCTGCCATGTAGCCAGCCTGCTGGGTGGT +
Preference number: 6 (lower is better)
Translates to: SWLDPIHSLGHS*HACHVASLLGG
Trigger: ACCACCCAGCAGGCTGGCTACATGGCAGGCATGGCAGCTATGCCCCAGACTGTGTATGGGGTCCAGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CCA 72 bp CCTGCATGCCACCCATATAGCCTGCAGGCATGGCCATaGGGGCAACCATCCCAGAAGCTCCTGGCTGAGCAA +
Preference number: 6 (lower is better)
Translates to: PACHPYSLQAWP*GQPSQKLLAEQ
Trigger: TTGCTCAGCCAGGAGCTTCTGGGATGGTTGCCCCCATGGCCATGCCTGCAGGCTATATGGGTGGCATGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS TCA 72 bp ATGGCCATGGGGGCAACCATCCCAGAAGCTCCTGGCTaGGCAACCATGCCTACTGGTGGAGGCATCATGCTC +
Preference number: 6 (lower is better)
Translates to: MAMGATIPEAPG*ATMPTGGGIML
Trigger: GAGCATGATGCCTCCACCAGTAGGCATGGTTGCTCAGCCAGGAGCTTCTGGGATGGTTGCCCCCATGGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS GCA 72 bp GACCCCATACACAGTCTGGGGCATAGCTGCCATGCCTaGCATGTAGCCAGCCTGCTGGGTGGTCATCATTCC +
Preference number: 6 (lower is better)
Translates to: DPIHSLGHSCHA*HVASLLGGHHS
Trigger: GGAATGATGACCACCCAGCAGGCTGGCTACATGGCAGGCATGGCAGCTATGCCCCAGACTGTGTATGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CCA 72 bp AGGCATGGCCATGGGGGCAACCATCCCAGAAGCTCCTaGCTGAGCAACCATGCCTACTGGTGGAGGCATCAT +
Preference number: 6 (lower is better)
Translates to: RHGHGGNHPRSS*LSNHAYWWRHH
Trigger: ATGATGCCTCCACCAGTAGGCATGGTTGCTCAGCCAGGAGCTTCTGGGATGGTTGCCCCCATGGCCATGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CCA 72 bp TTGATGCCTGCATGCCACCCATATAGCCTGCAGGCATaGCCATGGGGGCAACCATCCCAGAAGCTCCTGGCT +
Preference number: 6 (lower is better)
Translates to: LMPACHPYSLQA*PWGQPSQKLLA
Trigger: AGCCAGGAGCTTCTGGGATGGTTGCCCCCATGGCCATGCCTGCAGGCTATATGGGTGGCATGCAGGCATCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CAA 90 bp AGCCAGCCTGCTGGGTGGTCATCATTCCATTCGGCACACCCATCATaGATGCCTGCATGCCACCCATATAGCCTGCAGGCATGGCCATGG +
Preference number: 6 (lower is better)
Translates to: SQPAGWSSFHSAHPS*MPACHPYSLQAWPW
Trigger: CCATGGCCATGCCTGCAGGCTATATGGGTGGCATGCAGGCATCAATGATGGGTGTGCCGAATGGAATGATGACCACCCAGCAGGCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS TCA 72 bp AGCAGGCCACAGGAGCATCAAGGCCCAACAAATCCATaGCAGGCGCTGTGGATTTCGGGGAGCTTTTCCGAG +
Preference number: 6 (lower is better)
Translates to: SRPQEHQGPTNP*QALWISGSFSE
Trigger: CTCGGAAAAGCTCCCCGAAATCCACAGCGCCTGTCATGGATTTGTTGGGCCTTGATGCTCCTGTGGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000487871.1
ENST00000539317.2
ENST00000614549.4
CDS CCA 72 bp CCCAGAAGCTCCTGGCTGAGCAACCATGCCTACTGGTaGAGGCATCATGCTCCCCATTATGCTGTTAGGAGG +
Preference number: 6 (lower is better)
Translates to: PRSSWLSNHAYW*RHHAPHYAVRR
Trigger: CCTCCTAACAGCATAATGGGGAGCATGATGCCTCCACCAGTAGGCATGGTTGCTCAGCCAGGAGCTTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CCA 72 bp GGTCATCTGAGTAAGGTTCCATTGCAGCTGCTGAGCTaGCTGGACCCCATACACAGTCTGGGGCATAGCTGC +
Preference number: 6 (lower is better)
Translates to: GHLSKVPLQLLS*LDPIHSLGHSC
Trigger: GCAGCTATGCCCCAGACTGTGTATGGGGTCCAGCCAGCTCAGCAGCTGCAATGGAACCTTACTCAGATGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CCA 72 bp CATCCCAGAAGCTCCTGGCTGAGCAACCATGCCTACTaGTGGAGGCATCATGCTCCCCATTATGCTGTTAGG +
Preference number: 6 (lower is better)
Translates to: HPRSSWLSNHAY*WRHHAPHYAVR
Trigger: CCTAACAGCATAATGGGGAGCATGATGCCTCCACCAGTAGGCATGGTTGCTCAGCCAGGAGCTTCTGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CAA 72 bp GCTGGGTGGTCATCATTCCATTCGGCACACCCATCATaGATGCCTGCATGCCACCCATATAGCCTGCAGGCA +
Preference number: 6 (lower is better)
Translates to: AGWSSFHSAHPS*MPACHPYSLQA
Trigger: TGCCTGCAGGCTATATGGGTGGCATGCAGGCATCAATGATGGGTGTGCCGAATGGAATGATGACCACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CAA 72 bp CCAAGAGGCCCATCGCGGCCCATAGATTTCAAAATCTaGCCTCCTGCGCTGGCTGTGTTCCATTGGCTTCCA +
Preference number: 6 (lower is better)
Translates to: PRGPSRPIDFKI*PPALAVFHWLP
Trigger: TGGAAGCCAATGGAACACAGCCAGCGCAGGAGGCAAGATTTTGAAATCTATGGGCCGCGATGGGCCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435168.6
CDS TCA 72 bp CTGGGTGGTCATCATTCCATTCGGCACACCCATCATTaGTGCCTGCATGCCACCCATATAGCCTGCAGGCAT +
Preference number: 6 (lower is better)
Translates to: LGGHHSIRHTHH*CLHATHIACRH
Trigger: ATGCCTGCAGGCTATATGGGTGGCATGCAGGCATCAATGATGGGTGTGCCGAATGGAATGATGACCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS GCA 72 bp CCAAGAGGCCCATCGCGGCCCTTTAGACTGGCAATCTaGACAAAACTTGTTATCCTCCTCCAGCAGCAGGTT +
Preference number: 6 (lower is better)
Translates to: PRGPSRPFRLAI*TKLVILLQQQV
Trigger: AACCTGCTGCTGGAGGAGGATAACAAGTTTTGTGCAGATTGCCAGTCTAAAGGGCCGCGATGGGCCTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS GCA 72 bp CCCATCGCGGCCCATAGATTTCAAAATCTTGCCTCCTaGGCTGGCTGTGTTCCATTGGCTTCCACATCCTCT +
Preference number: 6 (lower is better)
Translates to: PIAAHRFQNLAS*AGCVPLASTSS
Trigger: AGAGGATGTGGAAGCCAATGGAACACAGCCAGCGCAGGAGGCAAGATTTTGAAATCTATGGGCCGCGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435168.6
CDS CAA 72 bp CATCGCGGCCCTTTAGACTGGCAATCTGCACAAAACTaGTTATCCTCCTCCAGCAGCAGGTTGGCCAGGACA +
Preference number: 6 (lower is better)
Translates to: HRGPLDWQSAQN*LSSSSSRLART
Trigger: TGTCCTGGCCAACCTGCTGCTGGAGGAGGATAACAAGTTTTGTGCAGATTGCCAGTCTAAAGGGCCGCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372718.8
CDS CAA 90 bp ACCAATGTTCCAAGAGGCCCATCGCGGCCCATAGATTTCAAAATCTaGCCTCCTGCGCTGGCTGTGTTCCATTGGCTTCCACATCCTCTC +
Preference number: 6 (lower is better)
Translates to: TNVPRGPSRPIDFKI*PPALAVFHWLPHPL
Trigger: GAGAGGATGTGGAAGCCAATGGAACACAGCCAGCGCAGGAGGCAAGATTTTGAAATCTATGGGCCGCGATGGGCCTCTTGGAACATTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435168.6
CDS GCA 72 bp CAGGTTCAGATTTTCAGGAACAGAGCCGGCACTCCCTaGAGTTGGCATGGAACCTACAACCTTTCTGGAACC +
Preference number: 6 (lower is better)
Translates to: QVQIFRNRAGTP*SWHGTYNLSGT
Trigger: GGTTCCAGAAAGGTTGTAGGTTCCATGCCAACTGCAGGGAGTGCCGGCTCTGTTCCTGAAAATCTGAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CCA 72 bp CAGATTTTCAGGAACAGAGCCGGCACTCCCTGCAGTTaGCATGGAACCTACAACCTTTCTGGAACCGGAAGA +
Preference number: 6 (lower is better)
Translates to: QIFRNRAGTPCS*HGTYNLSGTGR
Trigger: TCTTCCGGTTCCAGAAAGGTTGTAGGTTCCATGCCAACTGCAGGGAGTGCCGGCTCTGTTCCTGAAAATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CAA 72 bp TCAGATTTTCAGGAACAGAGCCGGCACTCCCTGCAGTaGGCATGGAACCTACAACCTTTCTGGAACCGGAAG +
Preference number: 6 (lower is better)
Translates to: SDFQEQSRHSLQ*AWNLQPFWNRK
Trigger: CTTCCGGTTCCAGAAAGGTTGTAGGTTCCATGCCAACTGCAGGGAGTGCCGGCTCTGTTCCTGAAAATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CCA 72 bp CGCCACTCATTGACTGTCCATAGTTCATCATGCCATTaGCTCCATAGAAGTTCATCCCAGCCATCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: RHSLTVHSSSCH*LHRSSSQPSAG
Trigger: CCCAGCAGATGGCTGGGATGAACTTCTATGGAGCCAATGGCATGATGAACTATGGACAGTCAATGAGTGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS TCA 72 bp CATCAACCTGGCTTCTCTGCACACCAGCTGGAGTTGTaGCAGTTGTGGCTCAAAACGTTGCTTTCTGAGCTA +
Preference number: 6 (lower is better)
Translates to: HQPGFSAHQLEL*QLWLKTLLSEL
Trigger: TAGCTCAGAAAGCAACGTTTTGAGCCACAACTGTCACAACTCCAGCTGGTGTGCAGAGAAGCCAGGTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435168.6
CDS CAA 90 bp GGGGATGGAACAGAGGCCAACAGATCTAAATCCTTCTCTAGGGTATaGCTGGTCTTACTATTTGCAATGGAGCAGGCCACAGGAGCATCA +
Preference number: 6 (lower is better)
Translates to: GDGTEANRSKSFSRV*LVLLFAMEQATGAS
Trigger: TGATGCTCCTGTGGCCTGCTCCATTGCAAATAGTAAGACCAGCAATACCCTAGAGAAGGATTTAGATCTGTTGGCCTCTGTTCCATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000487871.1
ENST00000539317.2
ENST00000614549.4
CDS TCA 72 bp GGCTTCCACATCCTCTCTCAGCCCTTCAACTGGCTCTaGGGTCTAAGAGACAACTTTGATAGATGGCATCAA +
Preference number: 6 (lower is better)
Translates to: GFHILSQPFNWL*GLRDNFDRWHQ
Trigger: TTGATGCCATCTATCAAAGTTGTCTCTTAGACCTCAGAGCCAGTTGAAGGGCTGAGAGAGGATGTGGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435168.6
CDS CCA 72 bp CCTTCTCTAGGGTATTGCTGGTCTTACTATTTGCAATaGAGCAGGCCACAGGAGCATCAAGGCCCAACAAAT +
Preference number: 6 (lower is better)
Translates to: PSLGYCWSYYLQ*SRPQEHQGPTN
Trigger: ATTTGTTGGGCCTTGATGCTCCTGTGGCCTGCTCCATTGCAAATAGTAAGACCAGCAATACCCTAGAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000487871.1
ENST00000539317.2
ENST00000614549.4
CDS CAA 72 bp CTAAATCCTTCTCTAGGGTATTGCTGGTCTTACTATTaGCAATGGAGCAGGCCACAGGAGCATCAAGGCCCA +
Preference number: 6 (lower is better)
Translates to: LNPSLGYCWSYY*QWSRPQEHQGP
Trigger: TGGGCCTTGATGCTCCTGTGGCCTGCTCCATTGCAAATAGTAAGACCAGCAATACCCTAGAGAAGGATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000487871.1
ENST00000539317.2
ENST00000614549.4
CDS CAA 72 bp GAGTCTGATTTGCTGCCTGTCCATTTCCGCCACTCATaGACTGTCCATAGTTCATCATGCCATTGGCTCCAT +
Preference number: 6 (lower is better)
Translates to: ESDLLPVHFRHS*TVHSSSCHWLH
Trigger: ATGGAGCCAATGGCATGATGAACTATGGACAGTCAATGAGTGGCGGAAATGGACAGGCAGCAAATCAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS CAA 90 bp CCAACAGATCTAAATCCTTCTCTAGGGTATTGCTGGTCTTACTATTaGCAATGGAGCAGGCCACAGGAGCATCAAGGCCCAACAAATCCA +
Preference number: 6 (lower is better)
Translates to: PTDLNPSLGYCWSYY*QWSRPQEHQGPTNP
Trigger: TGGATTTGTTGGGCCTTGATGCTCCTGTGGCCTGCTCCATTGCAAATAGTAAGACCAGCAATACCCTAGAGAAGGATTTAGATCTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000487871.1
ENST00000539317.2
ENST00000614549.4
CDS TCA 72 bp AGTCTGATTTGCTGCCTGTCCATTTCCGCCACTCATTaGCTGTCCATAGTTCATCATGCCATTGGCTCCATA +
Preference number: 6 (lower is better)
Translates to: SLICCLSISATH*LSIVHHAIGSI
Trigger: TATGGAGCCAATGGCATGATGAACTATGGACAGTCAATGAGTGGCGGAAATGGACAGGCAGCAAATCAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000539317.2
ENST00000614549.4
CDS GCA 72 bp CAGAGGCCAACAGATCTAAATCCTTCTCTAGGGTATTaGTGGTCTTACTATTTGCAATGGAGCAGGCCACAG +
Preference number: 6 (lower is better)
Translates to: QRPTDLNPSLGY*WSYYLQWSRPQ
Trigger: CTGTGGCCTGCTCCATTGCAAATAGTAAGACCAGCAATACCCTAGAGAAGGATTTAGATCTGTTGGCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000487871.1
ENST00000539317.2
ENST00000614549.4
CDS CCA 72 bp AGGCCAACAGATCTAAATCCTTCTCTAGGGTATTGCTaGTCTTACTATTTGCAATGGAGCAGGCCACAGGAG +
Preference number: 6 (lower is better)
Translates to: RPTDLNPSLGYC*SYYLQWSRPQE
Trigger: CTCCTGTGGCCTGCTCCATTGCAAATAGTAAGACCAGCAATACCCTAGAGAAGGATTTAGATCTGTTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000487871.1
ENST00000539317.2
ENST00000614549.4
CDS CAA 72 bp CTCTTTTCCCATCTCCACTGTAAAGCCACGGTGTTCTaGTGGGTAGGGCTGCTGTTATTCAAAGAGAGTTAC +
Preference number: 6 (lower is better)
Translates to: LFSHLHCKATVF*WVGLLLFKESY
Trigger: GTAACTCTCTTTGAATAACAGCAGCCCTACCCACAAGAACACCGTGGCTTTACAGTGGAGATGGGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487871.1
CDS CCA 72 bp TTTTCCCATCTCCACTGTAAAGCCACGGTGTTCTTGTaGGTAGGGCTGCTGTTATTCAAAGAGAGTTACCAA +
Preference number: 6 (lower is better)
Translates to: FSHLHCKATVFL*VGLLLFKESYQ
Trigger: TTGGTAACTCTCTTTGAATAACAGCAGCCCTACCCACAAGAACACCGTGGCTTTACAGTGGAGATGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487871.1
CDS CAA 72 bp ACAGAGGCCAACAGATCTAAATCCTTCTCTAGGGTATaGCTGGTCTTACTATTTGCAATGGAGCAGGCCACA +
Preference number: 6 (lower is better)
Translates to: TEANRSKSFSRV*LVLLFAMEQAT
Trigger: TGTGGCCTGCTCCATTGCAAATAGTAAGACCAGCAATACCCTAGAGAAGGATTTAGATCTGTTGGCCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372708.5
ENST00000372718.8
ENST00000487871.1
ENST00000539317.2
ENST00000614549.4
CDS CAA 90 bp GGTTTTGAACTCTTTTCCCATCTCCACTGTAAAGCCACGGTGTTCTaGTGGGTAGGGCTGCTGTTATTCAAAGAGAGTTACCAAAGAAAC +
Preference number: 6 (lower is better)
Translates to: GFELFSHLHCKATVF*WVGLLLFKESYQRN
Trigger: GTTTCTTTGGTAACTCTCTTTGAATAACAGCAGCCCTACCCACAAGAACACCGTGGCTTTACAGTGGAGATGGGAAAAGAGTTCAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487871.1