Pregenerated sensors for SMAD9-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000236711

Ensembl transcript IDs: ENST00000437983.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TTAATGAGAAAAATGAATACATCAGAAATAAGTTTCCACAGGACCTaGATCCACATACTTGGCCTTTCTACCTTCAAGATACTTCTCCAC	+
Preference number: 5 (lower is better) Translates to: LMRKMNTSEISFHRT*IHILGLSTFKILLH Trigger: GTGGAGAAGTATCTTGAAGGTAGAAAGGCCAAGTATGTGGATGCAGGTCCTGTGGAAACTTATTTCTGATGTATTCATTTTTCTCATTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437983.2
CDS TCA 72 bp	AACACAACCATGCTGCCTGATCACATTTTACTTTCATaGCTGAGAACCTCAAGTGGACCTGTGATGTCCCCG	+
Preference number: 6 (lower is better) Translates to: NTTMLPDHILLS*LRTSSGPVMSP Trigger: CGGGGACATCACAGGTCCACTTGAGGTTCTCAGTCATGAAAGTAAAATGTGATCAGGCAGCATGGTTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437983.2
CDS GCA 72 bp	AAAATGAATACATCAGAAATAAGTTTCCACAGGACCTaGATCCACATACTTGGCCTTTCTACCTTCAAGATA	+
Preference number: 6 (lower is better) Translates to: KMNTSEISFHRT*IHILGLSTFKI Trigger: TATCTTGAAGGTAGAAAGGCCAAGTATGTGGATGCAGGTCCTGTGGAAACTTATTTCTGATGTATTCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437983.2

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