RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMAD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000141646

Ensembl transcript IDs: ENST00000342988.8, ENST00000398417.6, ENST00000585448.1, ENST00000588745.5, ENST00000588860.5, ENST00000589076.5, ENST00000589706.1, ENST00000589941.1, ENST00000590061.1, ENST00000590499.1, ENST00000591126.5, ENST00000592186.5, ENST00000592911.5, ENST00000593223.1, ENST00000611848.1

Found 547 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATGTTTCCTGCCACGGCTGCTGCCTGGGCAGCTGCTGCAGCTTGTaGAGTAGCCGCCTGCTGCTGCATCTGTCGATGACACTGACGCAA +
Preference number: 1 (lower is better)
Translates to: DVSCHGCCLGSCCSL*SSRLLLHLSMTLTQ
Trigger: TTGCGTCAGTGTCATCGACAGATGCAGCAGCAGGCGGCTACTGCACAAGCTGCAGCAGCTGCCCAGGCAGCAGCCGTGGCAGGAAACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
3UTR CCA 90 bp AGTTGTCCCCAAAGCAGAAGCTACGAGTGGCTCTTCTCTGGCTTCTaGCATAGCTGCATTCCTCTGAATTTAGGGGAGGAAACAGTTGGG +
Preference number: 1 (lower is better)
Translates to: SCPQSRSYEWLFSGF*HSCIPLNLGEETVG
Trigger: CCCAACTGTTTCCTCCCCTAAATTCAGAGGAATGCAGCTATGCCAGAAGCCAGAGAAGAGCCACTCGTAGCTTCTGCTTTGGGGACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CCA 90 bp ACGGTAAAAGACCTCAGTCTAAAGGTTGTGGGTCTGCAATCGGCATaGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGT +
Preference number: 1 (lower is better)
Translates to: TVKDLSLKVVGLQSA*YEVLRLGAGGPGVS
Trigger: ACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCACAACCTTTAGACTGAGGTCTTTTACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611848.1
3UTR TCA 90 bp GGAGGGCCCGGTGTAAGTGAATTTCAATCCAGCAAGGTGTTTCTTTaGTGCTCTGTCTTGGGTAATCCGGTCCCCAGCCTTTCACAAAAC +
Preference number: 1 (lower is better)
Translates to: GGPGVSEFQSSKVFL*CSVLGNPVPSLSQN
Trigger: GTTTTGTGAAAGGCTGGGGACCGGATTACCCAAGACAGAGCATCAAAGAAACACCTTGCTGGATTGAAATTCACTTACACCGGGCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
3UTR GCA 90 bp CCAAAGGTCACACATCAAATTTGTGGCAGAGGGCAAACTAGAGAGTaGAACTGTCTGGCCCAACCCAGAGCCATTACTTTCAGGTTGAAC +
Preference number: 1 (lower is better)
Translates to: PKVTHQICGRGQTRE*NCLAQPRAITFRLN
Trigger: GTTCAACCTGAAAGTAATGGCTCTGGGTTGGGCCAGACAGTTGCACTCTCTAGTTTGCCCTCTGCCACAAATTTGATGTGTGACCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CCA 90 bp TGGGACTTTCAACTGACCAGTTGTCCCCAAAGCAGAAGCTACGAGTaGCTCTTCTCTGGCTTCTGGCATAGCTGCATTCCTCTGAATTTA +
Preference number: 1 (lower is better)
Translates to: WDFQLTSCPQSRSYE*LFSGFWHSCIPLNL
Trigger: TAAATTCAGAGGAATGCAGCTATGCCAGAAGCCAGAGAAGAGCCACTCGTAGCTTCTGCTTTGGGGACAACTGGTCAGTTGAAAGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CCA 90 bp GACTTTAACCAGGCAAAAGTATACAGAAAGCCACAAAGGAACTCCTaGGACTTTCAACTGACCAGTTGTCCCCAAAGCAGAAGCTACGAG +
Preference number: 1 (lower is better)
Translates to: DFNQAKVYRKPQRNS*DFQLTSCPQSRSYE
Trigger: CTCGTAGCTTCTGCTTTGGGGACAACTGGTCAGTTGAAAGTCCCAGGAGTTCCTTTGTGGCTTTCTGTATACTTTTGCCTGGTTAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR TCA 90 bp GAGAGTGCAACTGTCTGGCCCAACCCAGAGCCATTACTTTCAGGTTaGACAAGAACACTGGCTCTGGACCTATTGAGAAAGCATTTAAAT +
Preference number: 1 (lower is better)
Translates to: ESATVWPNPEPLLSG*TRTLALDLLRKHLN
Trigger: ATTTAAATGCTTTCTCAATAGGTCCAGAGCCAGTGTTCTTGTTCAACCTGAAAGTAATGGCTCTGGGTTGGGCCAGACAGTTGCACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR TCA 90 bp GAAAGTTTGCCAACTCCATGTTTAGTCTTAATCAATCCAAGCCCGTaGGTCCTTCTATCAATGACAAGCAGCCTTTGCAACAGCAGCTGG +
Preference number: 1 (lower is better)
Translates to: ESLPTPCLVLINPSP*VLLSMTSSLCNSSW
Trigger: CCAGCTGCTGTTGCAAAGGCTGCTTGTCATTGATAGAAGGACTCACGGGCTTGGATTGATTAAGACTAAACATGGAGTTGGCAAACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CCA 90 bp AAGGCACTGGACAAACATGGAATGAGGTCTTACGGTGGGTGTACATaGCTCATCTCTCATTCAGCTTGCACTGAAATTCAACATTTTGAG +
Preference number: 1 (lower is better)
Translates to: KALDKHGMRSYGGCT*LISHSACTEIQHFE
Trigger: CTCAAAATGTTGAATTTCAGTGCAAGCTGAATGAGAGATGAGCCATGTACACCCACCGTAAGACCTCATTCCATGTTTGTCCAGTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR TCA 90 bp ACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATaGATAAGGCCATGGACTTTTTACATACTTCTTGGTATGTTCAAA +
Preference number: 1 (lower is better)
Translates to: TTARDKAGPRMPLCG*IRPWTFYILLGMFK
Trigger: TTTGAACATACCAAGAAGTATGTAAAAAGTCCATGGCCTTATTCATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CCA 90 bp GCCAATACAATGAGGTCTTTTTCAGCACTTCACAGGAAAGTGTCTTaGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCT +
Preference number: 1 (lower is better)
Translates to: ANTMRSFSALHRKVS*VLSQSLYLCFKERS
Trigger: AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTTCCTGTGAAGTGCTGAAAAAGACCTCATTGTATTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR TCA 90 bp AAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTaGTATAAGGAGGACTATCATCACACAAGTGTTTCTATAGCTAAA +
Preference number: 1 (lower is better)
Translates to: KRPSEQGSRSCVHSR*YKEDYHHTSVSIAK
Trigger: TTTAGCTATAGAAACACTTGTGTGATGATAGTCCTCCTTATATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR TCA 90 bp GGGGGAAAATATGAATATGACTCACTTCTCTCTATCTCAACTACCTaGAACTCAGCAAGAATCAGGAAGCACTCTAAGCTACATCAAACT +
Preference number: 1 (lower is better)
Translates to: GGKYEYDSLLSISTT*NSARIRKHSKLHQT
Trigger: AGTTTGATGTAGCTTAGAGTGCTTCCTGATTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATTTTCCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR GCA 90 bp GCAAGAATCAGGAAGCACTCTAAGCTACATCAAACTGATATCAAATaGCAATACAATGAGGTCTTTTTCAGCACTTCACAGGAAAGTGTC +
Preference number: 1 (lower is better)
Translates to: ARIRKHSKLHQTDIK*QYNEVFFSTSQESV
Trigger: GACACTTTCCTGTGAAGTGCTGAAAAAGACCTCATTGTATTGGCATTTGATATCAGTTTGATGTAGCTTAGAGTGCTTCCTGATTCTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR TCA 90 bp TTAAATAAGGCAATTCTGGATGATGTGGAAAATTTCACTCCACAGTaGTTCCAGATAAACAAGATAAGCAACCTAGCAGCACTGGGACAA +
Preference number: 1 (lower is better)
Translates to: LNKAILDDVENFTPQ*FQINKISNLAALGQ
Trigger: TTGTCCCAGTGCTGCTAGGTTGCTTATCTTGTTTATCTGGAATCACTGTGGAGTGAAATTTTCCACATCATCCAGAATTGCCTTATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR GCA 90 bp ATCATCTATAAGCATTCACACTTTTCCCTTAAATCACATGTCCAATaGATTGAACAGAACTCAATACTTGAAGAAAGTTTGCCAACTCCA +
Preference number: 1 (lower is better)
Translates to: IIYKHSHFSLKSHVQ*IEQNSILEESLPTP
Trigger: TGGAGTTGGCAAACTTTCTTCAAGTATTGAGTTCTGTTCAATGCATTGGACATGTGATTTAAGGGAAAAGTGTGAATGCTTATAGATGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CCA 90 bp GGCAACCTATTTAGTGGTTACAGCAATACAAAACAGCCATGTTTCTaGAAAAAGCAAGGTTATATGGCAGTGATTTATTGTCATTATCTT +
Preference number: 1 (lower is better)
Translates to: GNLFSGYSNTKQPCF*KKQGYMAVIYCHYL
Trigger: AAGATAATGACAATAAATCACTGCCATATAACCTTGCTTTTTCCAGAAACATGGCTGTTTTGTATTGCTGTAACCACTAAATAGGTTGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp TCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAAGCCACGGCTGCTGCCTaGGCAGCTGCTGCAGCTTGT +
Preference number: 2 (lower is better)
Translates to: SAWYEVLRLGAGGPGVSEATAAA*AAAAAC
Trigger: ACAAGCTGCAGCAGCTGCCCAGGCAGCAGCCGTGGC...TTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
3UTR-3UTR GCA 90 bp ATCCTGAGTATGCATAAGCGACGAAGGTCATCAACACCAATTCCAGCAGCAGCTTCCTGCCACGGCTGCTaGCTGGGCAGCTGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: ILSMHKRRRSSTPIPAAASCHGC*LGSCCS
Trigger: GCTGCAGCAGCTGCCCAGGCAGCAGCCGTGGCAGGA...AGCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
3UTR-3UTR GCA 90 bp GAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTCAATCCAGCTGCTGCCTGGGCAGCTaGTGCAGCTTGTGCAGTAGC +
Preference number: 2 (lower is better)
Translates to: EVLRLGAGGPGVSEFQSSCCLGS*CSLCSS
Trigger: GCTACTGCACAAGCTGCAGCAGCTGCCCAGGCAGCA...GCTGGATTGAAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
3UTR-3UTR GCA 90 bp CTAAAGGTTGTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGCCAGGGATGTTTCCTaGCACGGCTGCTGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: LKVVGLQSAWYEVLRLGAARDVS*HGCCLG
Trigger: GCCCAGGCAGCAGCCGTGGCAGGAAACATCCCTGGC...AGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCACAACCTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
3UTR-3UTR CCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATAGTTCAAGACCAGCCTaGCCAACAGGCAAAACCCCG +
Preference number: 2 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDSSRPA*PTGKTP
Trigger: CGGGGTTTTGCCTGTTGGCCAGGCTGGTCTTGAACT...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATGCTCTGAGCCATGCCTaGCAAGTTCTGAAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDALSHA*QVLKRK
Trigger: TTTCCTCTTCAGAACTTGTCAGGCATGGCTCAGAGC...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp GCCCCAACGGTAAAAGACCTCAGTCTAAAGGTTGTGGGTCTGCAATCGGCATGGTTTGATGCTCTGTCTTaGGTAATCCGGTCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: APTVKDLSLKVVGLQSAWFDALS*VIRSPA
Trigger: GGCTGGGGACCGGATTACCCAAGACAGAGCATCAAA...CCATGCCGATTGCAGACCCACAACCTTTAGACTGAGGTCTTTTACCGTTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611848.1
3UTR-3UTR TCA 90 bp GAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTCAATCCAGCAATTCCAGCAGCAGCTaGCAGACCACACTGAAGAGG +
Preference number: 2 (lower is better)
Translates to: EVLRLGAGGPGVSEFQSSNSSSS*QTTLKR
Trigger: CCTCTTCAGTGTGGTCTGTCAGCTGCTGCTGGAATT...GCTGGATTGAAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
3UTR-3UTR CCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATCACATGTCTCAAGTATaGCTCTCCTTAAGCCAGACC +
Preference number: 2 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDHMSQV*LSLSQT
Trigger: GGTCTGGCTTAAGGAGAGCCATACTTGAGACATGTG...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAAAGTTCAAGACCAGCCTaGCCAACAGGCAAAACCCCG +
Preference number: 2 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEESSRPA*PTGKTP
Trigger: CGGGGTTTTGCCTGTTGGCCAGGCTGGTCTTGAACT...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCGGCACTGGACAAACATaGAATGAGGTCTTACGGTGG +
Preference number: 2 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPGTGQT*NEVLRW
Trigger: CCACCGTAAGACCTCATTCCATGTTTGTCCAGTGCC...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCCTAATCTTCAAGCTCTaGGCCATGCCTGACAAGTTC +
Preference number: 2 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPLIFKL*AMPDKF
Trigger: GAACTTGTCAGGCATGGCTCAGAGCTTGAAGATTAG...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAGGCAGGAGAATCAGTTaGACCCGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLGRRIS*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAACTGATTCTCCTGCC...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp CTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGAACAGGGGTTGAATaGATCACTAGTTATGCCTTC +
Preference number: 2 (lower is better)
Translates to: LQSAWYEVLRLGAGGPGVRTGVE*ITSYAF
Trigger: GAAGGCATAACTAGTGATTCATTCAACCCCTGTTCT...TACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611848.1
3UTR-3UTR TCA 90 bp CTAAAGGTTGTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTAGCTATTCCACCTACTaGTCCTGGGCCAGGGATGTT +
Preference number: 2 (lower is better)
Translates to: LKVVGLQSAWYEVLRLGASYSTY*SWARDV
Trigger: AACATCCCTGGCCCAGGATCAGTAGGTGGAATAGCT...AGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCACAACCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
3UTR-3UTR GCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCTCAAGCTCTGAGCCATaGCTGACAAGTTCTGAAGAG +
Preference number: 2 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPSSSEP*LTSSEE
Trigger: CTCTTCAGAACTTGTCAGGCATGGCTCAGAGCTTGA...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR GCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAACTGAGATCATACCACTaGACTCCTGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEELRSYH*TPAWAT
Trigger: TGTTGCCCAGGCAGGAGTGCAGTGGTATGATCTCAG...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CAA 90 bp AATCAATCCAAGCCCGTGAGTCCTTCTATCAATGACAAGCAGCCTTaGCAACAGCAGCTGGTTTCATCCCTTCCTCTCCAGCTACCACAA +
Preference number: 2 (lower is better)
Translates to: NQSKPVSPSINDKQP*QQQLVSSLPLQLPQ
Trigger: TTGTGGTAGCTGGAGAGGAAGGGATGAAACCAGCTGCTGTTGCAAAGGCTGCTTGTCATTGATAGAAGGACTCACGGGCTTGGATTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp CCAACGGTAAAAGACCTCAGTCTAAAGGTTGTGGGTCTGCAATCGGCATGGTATGCTCTGAGCCATGCCTaGCAAGTTCTGAAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: PTVKDLSLKVVGLQSAWYALSHA*QVLKRK
Trigger: TTTCCTCTTCAGAACTTGTCAGGCATGGCTCAGAGC...ATACCATGCCGATTGCAGACCCACAACCTTTAGACTGAGGTCTTTTACCGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611848.1
3UTR-3UTR TCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCAAGGTACCTCATCACTaGGATTGGACTCAAAAGTGC +
Preference number: 2 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPKVPHH*DWTQKC
Trigger: GCACTTTTGAGTCCAATCTCAGTGATGAGGTACCTT...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTGTGTTCATTCCAGGTaGTATAAGGAGGACTATCAT +
Preference number: 2 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDCVHSR*YKEDYH
Trigger: ATGATAGTCCTCCTTATATCACCTGGAATGAACACA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR GCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCTTGTTGTGTGTTGTTTaGTGGTGTCCTCCAGACAAC +
Preference number: 2 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPLLCVV*WCPPDN
Trigger: GTTGTCTGGAGGACACCAGCAAACAACACACAACAA...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR GCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCGAAATCCAAAACTGCTaGAAGGTAGCCAAGGTCACT +
Preference number: 2 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPEIQNC*KVAKVT
Trigger: AGTGACCTTGGCTACCTTGCAGCAGTTTTGGATTTC...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAAGATACACAATGTCCATaGGGAAGTCCCGGTAGAGTG +
Preference number: 2 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEDTQCP*GSPGRV
Trigger: CACTCTACCGGGACTTCCCCATGGACATTGTGTATC...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATAGTTGCAAGACAATCTaGATTGAAACCATCTTCACT +
Preference number: 2 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDSCKTI*IETIFT
Trigger: AGTGAAGATGGTTTCAATTCAGATTGTCTTGCAACT...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTGGCAGGAGAATCAGTTaGACCCGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSGRRIS*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAACTGATTCTCCTGCC...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCTGCATTACTTTAAGCTaGGTGTACCCCACCTACAAA +
Preference number: 2 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPCITLS*VYPTYK
Trigger: TTTGTAGGTGGGGTACACTCAGCTTAAAGTAATGCA...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCTCTATCTCAACTACCTaGAACTCAGCAAGAATCAGG +
Preference number: 2 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPSISTT*NSARIR
Trigger: CCTGATTCTTGCTGAGTTTCAGGTAGTTGAGATAGA...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR GCA 90 bp CTAAAGGTTGTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTTCAAGCTCTGAGCCATaGCTGACAAGTTCTGAAGAG +
Preference number: 2 (lower is better)
Translates to: LKVVGLQSAWYEVLRLGASSSEP*LTSSEE
Trigger: CTCTTCAGAACTTGTCAGGCATGGCTCAGAGCTTGA...AGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCACAACCTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
3UTR-3UTR CCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCCTATCTGCAACAAGATaGATTCTGCCTTTACGGGAA +
Preference number: 2 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPLSATR*ILPLRE
Trigger: TTCCCGTAAAGGCAGAATCCATCTTGTTGCAGATAG...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp ACGGTAAAAGACCTCAGTCTAAAGGTTGTGGGTCTGCAATCGGCATGGTATGAATTATGCCTTCAGACGTaGAAGATGGGTGCCACGTGT +
Preference number: 2 (lower is better)
Translates to: TVKDLSLKVVGLQSAWYELCLQT*KMGATC
Trigger: ACACGTGGCACCCATCTTCCACGTCTGAAGGCATAA...TTCATACCATGCCGATTGCAGACCCACAACCTTTAGACTGAGGTCTTTTACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611848.1
3UTR-3UTR TCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAGCTCTGAGCCATGCCTaGCAAGTTCTGAAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLALSHA*QVLKRK
Trigger: TTTCCTCTTCAGAACTTGTCAGGCATGGCTCAGAGC...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCTGTGTTCATTCCAGGTaGTATAAGGAGGACTATCAT +
Preference number: 2 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPCVHSR*YKEDYH
Trigger: ATGATAGTCCTCCTTATATCACCTGGAATGAACACA...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAACTTTAGCTACTCCTTaGGGCAGGATGTCAGACCCT +
Preference number: 2 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLTLATP*GRMSDP
Trigger: AGGGTCTGACATCCTGCCCCAAGGAGTAGCTAAAGT...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CAA 90 bp TTGCTTTGTTGTGTGTTGTTTGCTGGTGTCCTCCAGACAACGGTATaGCCTCTGGCTACTGATGCTAATTTAGTAACCCTTGTAACCCCA +
Preference number: 2 (lower is better)
Translates to: LLCCVLFAGVLQTTV*PLATDANLVTLVTP
Trigger: TGGGGTTACAAGGGTTACTAAATTAGCATCAGTAGCCAGAGGCAATACCGTTGTCTGGAGGACACCAGCAAACAACACACAACAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CAA 90 bp AGAGAGTGCAACTGTCTGGCCCAACCCAGAGCCATTACTTTCAGGTaGAACAAGAACACTGGCTCTGGACCTATTGAGAAAGCATTTAAA +
Preference number: 2 (lower is better)
Translates to: RECNCLAQPRAITFR*NKNTGSGPIEKAFK
Trigger: TTTAAATGCTTTCTCAATAGGTCCAGAGCCAGTGTTCTTGTTCAACCTGAAAGTAATGGCTCTGGGTTGGGCCAGACAGTTGCACTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTAGGCAGAGGTTGCAGTaGGCTGAGATCATACCACTG +
Preference number: 2 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSRQRLQ*AEIIPL
Trigger: CAGTGGTATGATCTCAGCTCACTGCAACCTCTGCCT...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAGCTAGAAGAGAGCTCTaGATGATCCAGCCAAAAGTC +
Preference number: 2 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLARREL*MIQPKV
Trigger: GACTTTTGGCTGGATCATTCAGAGCTCTCTTCTAGC...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp CTAAAGGTTGTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTTCACAAAACTCATCCTaGGTATGCATAAGCGACGAA +
Preference number: 2 (lower is better)
Translates to: LKVVGLQSAWYEVLRLGASQNSS*VCISDE
Trigger: TTCGTCGCTTATGCATACTCAGGATGAGTTTTGTGA...AGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCACAACCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
3UTR-3UTR CCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCTACATATTGTGTCTGTaGTACAGTCAATACATCTGC +
Preference number: 2 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPYILCL*YSQYIC
Trigger: GCAGATGTATTGACTGTACCACAGACACAATATGTA...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTACCAAGACAGGTGGCTTaGCTCCAAAGAGATACTTCT +
Preference number: 2 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLPRQVA*LQRDTS
Trigger: AGAAGTATCTCTTTGGAGCCAAGCCACCTGTCTTGG...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAAATGAGGTCTTACGGTaGGTGTACATGGCTCATCTC +
Preference number: 2 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLNEVLR*VYMAHL
Trigger: GAGATGAGCCATGTACACCCACCGTAAGACCTCATT...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAAAGGTACCTCATCACTaGGATTGGACTCAAAAGTGC +
Preference number: 2 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLKVPHH*DWTQKC
Trigger: GCACTTTTGAGTCCAATCTCAGTGATGAGGTACCTT...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAAGGCAGAGGTTGCAGTaGGCTGAGATCATACCACTG +
Preference number: 2 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVRQRLQ*AEIIPL
Trigger: CAGTGGTATGATCTCAGCTCACTGCAACCTCTGCCT...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAGAAGAGAGCTCTGAATaGTCCAGCCAAAAGTCACTT +
Preference number: 2 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLEESSE*SSQKSL
Trigger: AAGTGACTTTTGGCTGGATCATTCAGAGCTCTCTTC...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAATCAATCCAAGCCCGTaGGTCCTTCTATCAATGACA +
Preference number: 2 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLINPSP*VLLSMT
Trigger: TGTCATTGATAGAAGGACTCACGGGCTTGGATTGAT...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp ACGGTAAAAGACCTCAGTCTAAAGGTTGTGGGTCTGCAATCGGCATGGTATGAATCACAAAACTCATCCTaGGTATGCATAAGCGACGAA +
Preference number: 2 (lower is better)
Translates to: TVKDLSLKVVGLQSAWYESQNSS*VCISDE
Trigger: TTCGTCGCTTATGCATACTCAGGATGAGTTTTGTGA...TTCATACCATGCCGATTGCAGACCCACAACCTTTAGACTGAGGTCTTTTACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611848.1
3UTR-3UTR GCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAGAAGAAATCCAAAACTaGTGCAAGGTAGCCAAGGTC +
Preference number: 2 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLEEIQN*CKVAKV
Trigger: GACCTTGGCTACCTTGCAGCAGTTTTGGATTTCTTC...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATGATACACAATGTCCATaGGGAAGTCCCGGTAGAGTG +
Preference number: 2 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDDTQCP*GSPGRV
Trigger: CACTCTACCGGGACTTCCCCATGGACATTGTGTATC...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAAGAAACCAAGACAGGTaGCTTGGCTCCAAAGAGATA +
Preference number: 2 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLRNQDR*LGSKEI
Trigger: TATCTCTTTGGAGCCAAGCCACCTGTCTTGGTTTCT...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCAAACAGCCATGTTTCTaGAAAAAGCAAGGTTATATG +
Preference number: 2 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPKQPCF*KKQGYM
Trigger: CATATAACCTTGCTTTTTCCAGAAACATGGCTGTTT...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTTGGACAAACATGGAATaGGGTCTTACGGTGGGTGTA +
Preference number: 2 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSWTNME*GLTVGV
Trigger: TACACCCACCGTAAGACCTCATTCCATGTTTGTCCA...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAGCAGCACAGCTAATATaGGTTCAGTTTACTCACATG +
Preference number: 2 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLAAQLI*VQFTHM
Trigger: CATGTGAGTAAACTGAACTCATATTAGCTGTGCTGC...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR GCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTTCAAGCTCTGAGCCATaGCTGACAAGTTCTGAAGAG +
Preference number: 2 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSSSSEP*LTSSEE
Trigger: CTCTTCAGAACTTGTCAGGCATGGCTCAGAGCTTGA...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTCTCTCAGAAAGGGTGTaGACTAATGTGACTCTGCAT +
Preference number: 2 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSLSERV*TNVTLH
Trigger: ATGCAGAGTCACATTAGTTCACACCCTTTCTGAGAG...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTACAAATGCCAATACAATaGGGTCTTTTTCAGCACTTC +
Preference number: 2 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLQMPIQ*GLFQHF
Trigger: GAAGTGCTGAAAAAGACCTCATTGTATTGGCATTTG...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR GCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTATCCAGACAACGGTATTaGCTCTGGCTACTGATGCTA +
Preference number: 2 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVSRQRY*LWLLML
Trigger: TAGCATCAGTAGCCAGAGGCAATACCGTTGTCTGGA...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAAAAACAGCCATGTTTCTaGAAAAAGCAAGGTTATATG +
Preference number: 2 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEKQPCF*KKQGYM
Trigger: CATATAACCTTGCTTTTTCCAGAAACATGGCTGTTT...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTACACATGTCTCAAGTATaGCTCTCCTTAAGCCAGACC +
Preference number: 2 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVHMSQV*LSLSQT
Trigger: GGTCTGGCTTAAGGAGAGCCATACTTGAGACATGTG...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAAGTTGCAAGACAATCTaGATTGAAACCATCTTCACT +
Preference number: 2 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLSCKTI*IETIFT
Trigger: AGTGAAGATGGTTTCAATTCAGATTGTCTTGCAACT...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTACTCTCAGAAAGGGTGTaGACTAATGTGACTCTGCAT +
Preference number: 2 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVLSERV*TNVTLH
Trigger: ATGCAGAGTCACATTAGTTCACACCCTTTCTGAGAG...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTATACATATTGTGTCTGTaGTACAGTCAATACATCTGC +
Preference number: 2 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLYILCL*YSQYIC
Trigger: GCAGATGTATTGACTGTACCACAGACACAATATGTA...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAGGCACTGGACAAACATaGAATGAGGTCTTACGGTGG +
Preference number: 2 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEGTGQT*NEVLRW
Trigger: CCACCGTAAGACCTCATTCCATGTTTGTCCAGTGCC...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTCTATCTGCAACAAGATaGATTCTGCCTTTACGGGAA +
Preference number: 2 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSLSATR*ILPLRE
Trigger: TTCCCGTAAAGGCAGAATCCATCTTGTTGCAGATAG...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAACTAATCTTCAAGCTCTaGGCCATGCCTGACAAGTTC +
Preference number: 2 (lower is better)
Translates to: NMNMTHFSLSQLPETQQELIFKL*AMPDKF
Trigger: GAACTTGTCAGGCATGGCTCAGAGCTTGAAGATTAG...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTATGCATTACTTTAAGCTaGGTGTACCCCACCTACAAA +
Preference number: 2 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVCITLS*VYPTYK
Trigger: TTTGTAGGTGGGGTACACTCAGCTTAAAGTAATGCA...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAACCAAGACAGGTGGCTTaGCTCCAAAGAGATACTTCT +
Preference number: 2 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEPRQVA*LQRDTS
Trigger: AGAAGTATCTCTTTGGAGCCAAGCCACCTGTCTTGG...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTACAAATGCCAATACAATaGGGTCTTTTTCAGCACTTC +
Preference number: 2 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVQMPIQ*GLFQHF
Trigger: GAAGTGCTGAAAAAGACCTCATTGTATTGGCATTTG...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR GCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAAATAGAACTGGCTGTTaGCTGTCATTTAGTAGAAGG +
Preference number: 2 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVNRTGC*LSFSRR
Trigger: CCTTCTACTAAATGACAGGCAACAGCCAGTTCTATT...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR TCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAATGCCACTTTGTGGATaGATAAGGCCATGGACTTTT +
Preference number: 2 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEMPLCG*IRPWTF
Trigger: AAAAGTCCATGGCCTTATTCATCCACAAAGTGGCAT...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAAATAAGCAAACTCAGTaGTTTCTAGGATGGTCTATT +
Preference number: 2 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVNKQTQ*FLGWSI
Trigger: AATAGACCATCCTAGAAACCACTGAGTTTGCTTATT...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CAA 90 bp TCTATAAGCATTCACACTTTTCCCTTAAATCACATGTCCAATGCATaGAACAGAACTCAATACTTGAAGAAAGTTTGCCAACTCCATGTT +
Preference number: 2 (lower is better)
Translates to: SISIHTFPLNHMSNA*NRTQYLKKVCQLHV
Trigger: AACATGGAGTTGGCAAACTTTCTTCAAGTATTGAGTTCTGTTCAATGCATTGGACATGTGATTTAAGGGAAAAGTGTGAATGCTTATAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR GCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAATAGTCAAAGATACCTaGAACTCACCTTCCTACAAT +
Preference number: 2 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEIVKDT*NSPSYN
Trigger: ATTGTAGGAAGGTGAGTTGCAGGTATCTTTGACTAT...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAACAATTCTGGATGATGTaGAAAATTTCACTCCACAGT +
Preference number: 2 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEQFWMM*KISLHS
Trigger: ACTGTGGAGTGAAATTTTCCACATCATCCAGAATTG...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR GCA 72 bp GATGTTTCCTGCCACGGCTGCTGCCTGGGCAGCTGCTaGAGCTTGTGCAGTAGCCGCCTGCTGCTGCATCTG +
Preference number: 3 (lower is better)
Translates to: DVSCHGCCLGSC*SLCSSRLLLHL
Trigger: CAGATGCAGCAGCAGGCGGCTACTGCACAAGCTGCAGCAGCTGCCCAGGCAGCAGCCGTGGCAGGAAACATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
3UTR-3UTR CAA 90 bp ATCCTGAGTATGCATAAGCGACGAAGGTCATCAACACCAATTCCAGCAGCAGCTGGCAGCTGCTGCAGCTaGTGCAGTAGCCGCCTGCTG +
Preference number: 3 (lower is better)
Translates to: ILSMHKRRRSSTPIPAAAGSCCS*CSSRLL
Trigger: CAGCAGGCGGCTACTGCACAAGCTGCAGCAGCTGCC...AGCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAGGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
3UTR TCA 72 bp CAGTCTAAAGGTTGTGGGTCTGCAATCGGCATGGTATaGAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGT +
Preference number: 3 (lower is better)
Translates to: QSKGCGSAIGMV*STSSRSWRARC
Trigger: ACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCACAACCTTTAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
3UTR CCA 72 bp GACCTCAGTCTAAAGGTTGTGGGTCTGCAATCGGCATaGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCC +
Preference number: 3 (lower is better)
Translates to: DLSLKVVGLQSA*YEVLRLGAGGP
Trigger: GGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCACAACCTTTAGACTGAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
3UTR-3UTR CAA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATACCAAGACAGGTGGCTaGGCTCCAAAGAGATACTTC +
Preference number: 3 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDTKTGG*APKRYF
Trigger: GAAGTATCTCTTTGGAGCCAAGCCACCTGTCTTGGT...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CCA 72 bp CAACTGACCAGTTGTCCCCAAAGCAGAAGCTACGAGTaGCTCTTCTCTGGCTTCTGGCATAGCTGCATTCCT +
Preference number: 3 (lower is better)
Translates to: QLTSCPQSRSYE*LFSGFWHSCIP
Trigger: AGGAATGCAGCTATGCCAGAAGCCAGAGAAGAGCCACTCGTAGCTTCTGCTTTGGGGACAACTGGTCAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CAA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATAAAATGCCAGTAAAGTaGGCAATAACGAAGGGAGCA +
Preference number: 3 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDKMPVK*AITKGA
Trigger: TGCTCCCTTCGTTATTGCCAACTTTACTGGCATTTT...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR TCA 72 bp AGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTaGATTTCAATCCAGCAAGGTGTTTCTTTGATGCTC +
Preference number: 3 (lower is better)
Translates to: STSSRSWRARCK*ISIQQGVSLML
Trigger: GAGCATCAAAGAAACACCTTGCTGGATTGAAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
3UTR GCA 72 bp ACACATCAAATTTGTGGCAGAGGGCAAACTAGAGAGTaGAACTGTCTGGCCCAACCCAGAGCCATTACTTTC +
Preference number: 3 (lower is better)
Translates to: THQICGRGQTRE*NCLAQPRAITF
Trigger: GAAAGTAATGGCTCTGGGTTGGGCCAGACAGTTGCACTCTCTAGTTTGCCCTCTGCCACAAATTTGATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTACTCCAGACAACGGTATaGCCTCTGGCTACTGATGCT +
Preference number: 3 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLLQTTV*PLATDA
Trigger: AGCATCAGTAGCCAGAGGCAATACCGTTGTCTGGAG...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTATCACAGGAAAGTGTCTaGGGTCCTGTCCCAGAGTTT +
Preference number: 3 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLSQESV*GPVPEF
Trigger: AAACTCTGGGACAGGACCCAAGACACTTTCCTGTGA...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR TCA 72 bp GGTGTAAGTGAATTTCAATCCAGCAAGGTGTTTCTTTaGTGCTCTGTCTTGGGTAATCCGGTCCCCAGCCTT +
Preference number: 3 (lower is better)
Translates to: GVSEFQSSKVFL*CSVLGNPVPSL
Trigger: AAGGCTGGGGACCGGATTACCCAAGACAGAGCATCAAAGAAACACCTTGCTGGATTGAAATTCACTTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
3UTR GCA 72 bp GACTCGAAAGCCTTAATAAACTCTGACCAGAGTGTGTaGGTGCGTGTGTGTGTGCACGCAATTCAAAAGCTA +
Preference number: 3 (lower is better)
Translates to: DSKALINSDQSV*VRVCVHAIQKL
Trigger: TAGCTTTTGAATTGCGTGCACACACACACGCACGCACACACTCTGGTCAGAGTTTATTAAGGCTTTCGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CAA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCTCCCAGAGTTTGTACTaGTGTTTTAAAGAACGTTCT +
Preference number: 3 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPSQSLY*CFKERS
Trigger: AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGA...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAAATGACAAGCAGCCTTaGCAACAGCAGCTGGTTTCA +
Preference number: 3 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLNDKQP*QQQLVS
Trigger: TGAAACCAGCTGCTGTTGCAAAGGCTGCTTGTCATT...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR TCA 72 bp AGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATaGATAAGGCCATGGACTTTTTACATACTTCTTGGT +
Preference number: 3 (lower is better)
Translates to: RDKAGPRMPLCG*IRPWTFYILLG
Trigger: ACCAAGAAGTATGTAAAAAGTCCATGGCCTTATTCATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR TCA 72 bp CAGACCACACTGAAGAGGTTAAGAACAGGGGTTGAATaGATCACTAGTTATGCCTTCAGACGTGGAAGATGG +
Preference number: 3 (lower is better)
Translates to: QTTLKRLRTGVE*ITSYAFRRGRW
Trigger: CCATCTTCCACGTCTGAAGGCATAACTAGTGATTCATTCAACCCCTGTTCTTAACCTCTTCAGTGTGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611848.1
3UTR-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAGCCATTACTTTCAGGTaGAACAAGAACACTGGCTCT +
Preference number: 3 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLAITFR*NKNTGS
Trigger: AGAGCCAGTGTTCTTGTTCAACCTGAAAGTAATGGC...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR TCA 72 bp CCAACTCCATGTTTAGTCTTAATCAATCCAAGCCCGTaGGTCCTTCTATCAATGACAAGCAGCCTTTGCAAC +
Preference number: 3 (lower is better)
Translates to: PTPCLVLINPSP*VLLSMTSSLCN
Trigger: GTTGCAAAGGCTGCTTGTCATTGATAGAAGGACTCACGGGCTTGGATTGATTAAGACTAAACATGGAGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CCA 72 bp GACAAACATGGAATGAGGTCTTACGGTGGGTGTACATaGCTCATCTCTCATTCAGCTTGCACTGAAATTCAA +
Preference number: 3 (lower is better)
Translates to: DKHGMRSYGGCT*LISHSACTEIQ
Trigger: TTGAATTTCAGTGCAAGCTGAATGAGAGATGAGCCATGTACACCCACCGTAAGACCTCATTCCATGTTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CAA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAATTATTGTCATTATCTTaGTATACCAGGGGCGGTAAA +
Preference number: 3 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEELLSLS*YTRGGK
Trigger: TTTACCGCCCCTGGTATACAAAGATAATGACAATAA...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR TCA 72 bp TCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTaGTATAAGGAGGACTATCATCACACAAGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: SEQGSRSCVHSR*YKEDYHHTSVS
Trigger: AGAAACACTTGTGTGATGATAGTCCTCCTTATATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR TCA 72 bp TACTCATCCAAGGGTAGGCTAGAAGAGAGCTCTGAATaGTCCAGCCAAAAGTCACTTAATCAAAATGGACCT +
Preference number: 3 (lower is better)
Translates to: YSSKGRLEESSE*SSQKSLNQNGP
Trigger: AGGTCCATTTTGATTAAGTGACTTTTGGCTGGATCATTCAGAGCTCTCTTCTAGCCTACCCTTGGATGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAAACGTTCTAGTAAGTTaGGTTATCTGGTTTCCTTGC +
Preference number: 3 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLNVLVS*VIWFPC
Trigger: GCAAGGAAACCAGATAACCAAACTTACTAGAACGTT...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAGTCCTGTCCCAGAGTTaGTACTTGTGTTTTAAAGAA +
Preference number: 3 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLVLSQS*YLCFKE
Trigger: TTCTTTAAAACACAAGTACAAACTCTGGGACAGGAC...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAAAGGTTTGTTTTGCTTaGTTGTGTGTTGTTTGCTGG +
Preference number: 3 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLKVCFA*LCVVCW
Trigger: CCAGCAAACAACACACAACAAAGCAAAACAAACCTT...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CCA 72 bp ATGAGGTCTTTTTCAGCACTTCACAGGAAAGTGTCTTaGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAA +
Preference number: 3 (lower is better)
Translates to: MRSFSALHRKVS*VLSQSLYLCFK
Trigger: TTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTTCCTGTGAAGTGCTGAAAAAGACCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CCA 72 bp GTGTTTATTGCAGCCCCTAAGGTGGTGCTAGGCCTTTaGTTAAAATTAAGTCTTAAGGGCATACTATGTAAC +
Preference number: 3 (lower is better)
Translates to: VFIAAPKVVLGL*LKLSLKGILCN
Trigger: GTTACATAGTATGCCCTTAAGACTTAATTTTAACCAAAGGCCTAGCACCACCTTAGGGGCTGCAATAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CAA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAACCAAGACAGGTGGCTaGGCTCCAAAGAGATACTTC +
Preference number: 3 (lower is better)
Translates to: NMNMTHFSLSQLPETQQETKTGG*APKRYF
Trigger: GAAGTATCTCTTTGGAGCCAAGCCACCTGTCTTGGT...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CAA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTATTTGTTGTGTGTTGTTaGCTGGTGTCCTCCAGACAA +
Preference number: 3 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVFVVCC*LVSSRQ
Trigger: TTGTCTGGAGGACACCAGCAAACAACACACAACAAA...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAAACAGAACTCAATACTaGAAGAAAGTTTGCCAACTC +
Preference number: 3 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLNRTQY*KKVCQL
Trigger: GAGTTGGCAAACTTTCTTCAAGTATTGAGTTCTGTT...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR TCA 72 bp TATGAATATGACTCACTTCTCTCTATCTCAACTACCTaGAACTCAGCAAGAATCAGGAAGCACTCTAAGCTA +
Preference number: 3 (lower is better)
Translates to: YEYDSLLSISTT*NSARIRKHSKL
Trigger: TAGCTTAGAGTGCTTCCTGATTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR TCA 72 bp AACGGTGTGAAAAGTATCCACATCAACAGAGAGAAATaGTTGTCTTCACCAAAGGTTTTCCTTAGTCCTTAC +
Preference number: 3 (lower is better)
Translates to: NGVKSIHINREK*LSSPKVFLSPY
Trigger: GTAAGGACTAAGGAAAACCTTTGGTGAAGACAATCATTTCTCTCTGTTGATGTGGATACTTTTCACACCGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR GCA 72 bp AGGAAGCACTCTAAGCTACATCAAACTGATATCAAATaGCAATACAATGAGGTCTTTTTCAGCACTTCACAG +
Preference number: 3 (lower is better)
Translates to: RKHSKLHQTDIK*QYNEVFFSTSQ
Trigger: CTGTGAAGTGCTGAAAAAGACCTCATTGTATTGGCATTTGATATCAGTTTGATGTAGCTTAGAGTGCTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CAA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTATTATTGTCATTATCTTaGTATACCAGGGGCGGTAAA +
Preference number: 3 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVLLSLS*YTRGGK
Trigger: TTTACCGCCCCTGGTATACAAAGATAATGACAATAA...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR-3UTR CAA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTATTCCCAAGGTTTGTTTaGCTTTGTTGTGTGTTGTTT +
Preference number: 3 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVFPRFV*LCCVLF
Trigger: AAACAACACACAACAAAGCAAAACAAACCTTGGGAA...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCTCCTGCCACGGCTGCTaGCTGGGCAGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VGLQSAWYEVLRLGAGGPSCHGC*LGSCCS
Trigger: GCTGCAGCAGCTGCCCAGGCAGCAGCCGTGGCAGGA...GGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR TCA 90 bp CTGGGCAGCTGCTGCAGCTTGTGCAGTAGCCGCCTGCTGCTGCATCTGTCGATGATAGGCGGGTGGTGCTaGAGATGGCCGTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LGSCCSLCSSRLLLHLSMIGGWC*RWPFWW
Trigger: CCACCAAAACGGCCATCTTCAGCACCACCCGCCTAT...CATCGACAGATGCAGCAGCAGGCGGCTACTGCACAAGCTGCAGCAGCTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR GCA 90 bp GTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGCCAGGGATGTTTCCTaGCACGGCTGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VGLQSAWYEVLRLGAGGPARDVS*HGCCLG
Trigger: GCCCAGGCAGCAGCCGTGGCAGGAAACATCCCTGGC...GGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR CCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAACCTGGGCTCGGGCGGTaGCGAGGGGAGTCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEPGLGR*RGESAL
Trigger: GAGAGCGGACTCCCCTCGCCACCGCCCGAGCCCAGG...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342988.8
CDS-3UTR GCA 90 bp CTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTATGCTGCCTGGGCAGCTaGTGCAGCTTGTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LQSAWYEVLRLGAGGPGVCCLGS*CSLCSS
Trigger: GCTACTGCACAAGCTGCAGCAGCTGCCCAGGCAGCA...TACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR TCA 90 bp TGCAGCTTGTGCAGTAGCCGCCTGCTGCTGCATCTGTCGATGACACTGACGCAATTCCGACCAGCCACCTaGAGCCTCCCATCCAATGTT +
Preference number: 4 (lower is better)
Translates to: CSLCSSRLLLHLSMTLTQFRPAT*SLPSNV
Trigger: AACATTGGATGGGAGGCTTCAGGTGGCTGGTCGGAA...TTGCGTCAGTGTCATCGACAGATGCAGCAGCAGGCGGCTACTGCACAAGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR TCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTCCTGGCTGAGGCCCTaGTGCTATCTGCAACAGTCC +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDSWLRP*CYLQQS
Trigger: GGACTGTTGCAGATAGCATCAGGGCCTCAGCCAGGA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp TGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTCAATCCTGCCACGGCTGCTaGCTGGGCAGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WYEVLRLGAGGPGVSEFQSCHGC*LGSCCS
Trigger: GCTGCAGCAGCTGCCCAGGCAGCAGCCGTGGCAGGA...TTGAAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR GCA 90 bp CTGAGTATGCATAAGCGACGAAGGTCATCAACACCAATTCCAGCAGCAGCTGACGCCAGGGATGTTTCCTaGCACGGCTGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSMHKRRRSSTPIPAAADARDVS*HGCCLG
Trigger: GCCCAGGCAGCAGCCGTGGCAGGAAACATCCCTGGC...GTCAGCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR CCA 90 bp CTGAGTATGCATAAGCGACGAAGGTCATCAACACCAATTCCAGCAGCAGCTGACGCCACGGCTGCTGCCTaGGCAGCTGCTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LSMHKRRRSSTPIPAAADATAAA*AAAAAC
Trigger: ACAAGCTGCAGCAGCTGCCCAGGCAGCAGCCGTGGC...GTCAGCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR TCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTTCCGACCAGCCACCTaGAGCCTCCCATCCAATGTT +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDFRPAT*SLPSNV
Trigger: AACATTGGATGGGAGGCTTCAGGTGGCTGGTCGGAA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCTACTCAGGAGCAGGATaGTTGGAAATGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VGLQSAWYEVLRLGAGGPYSGAG*LEMGGW
Trigger: CCAGCCTCCCATTTCCAATCATCCTGCTCCTGAGTA...GGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR GCA 90 bp CTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAGTCCTTCACTATGGCTaGCCCCCAGTATACTGGCAG +
Preference number: 4 (lower is better)
Translates to: LQSAWYEVLRLGAGGPGVVLHYG*PPVYWQ
Trigger: CTGCCAGTATACTGGGGGGCAGCCATAGTGAAGGAC...TACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR GCA 90 bp CTGGGCAGCTGCTGCAGCTTGTGCAGTAGCCGCCTGCTGCTGCATCTGTCGATGATTAGGTGTGTATGGTaGAGTCCTACTTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: LGSCCSLCSSRLLLHLSMIRCVW*SPTSSP
Trigger: TGGACTGGAAGTAGGACTGCACCATACACACCTAAT...CATCGACAGATGCAGCAGCAGGCGGCTACTGCACAAGCTGCAGCAGCTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR GCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATAACAGCATCTCCAGGTaGACGCCCAGCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDNSISR*TPSFSV
Trigger: GACAGAGAAGCTGGGCGTGCACCTGGAGATGCTGTT...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp CTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAACAGCATCTCCAGGTaGACGCCCAGCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LQSAWYEVLRLGAGGPGVNSISR*TPSFSV
Trigger: GACAGAGAAGCTGGGCGTGCACCTGGAGATGCTGTT...TACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR GCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAAGCCAGGGATGTTTCCTaGCACGGCTGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEARDVS*HGCCLG
Trigger: GCCCAGGCAGCAGCCGTGGCAGGAAACATCCCTGGC...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATGGGCAAACTAGAGAGTaGAACTGTCTGGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDGQTRE*NCLAQP
Trigger: GGGTTGGGCCAGACAGTTGCACTCTCTAGTTTGCCC...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCTCCTGGCTGAGGCCCTaGTGCTATCTGCAACAGTCC +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPSWLRP*CYLQQS
Trigger: GGACTGTTGCAGATAGCATCAGGGCCTCAGCCAGGA...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AATCCAGCAAGGTGTTTCTTTGATGCTCTGTCTTGGGTAATCCGGTCCCCAGCCATAGGCGGGTGGTGCTaGAGATGGCCGTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: NPARCFFDALSWVIRSPAIGGWC*RWPFWW
Trigger: CCACCAAAACGGCCATCTTCAGCACCACCCGCCTAT...GGCTGGGGACCGGATTACCCAAGACAGAGCATCAAAGAAACACCTTGCTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR TCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTACTCAGGAGCAGGATaGTTGGAAATGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDYSGAG*LEMGGW
Trigger: CCAGCCTCCCATTTCCAATCATCCTGCTCCTGAGTA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCGGCAGGAGAATCAGTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPGRRIS*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAACTGATTCTCCTGCC...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGCCCTGATGCTATCTaGAACAGTCCTTCACTATGG +
Preference number: 4 (lower is better)
Translates to: VGLQSAWYEVLRLGAGGPGPDAI*NSPSLW
Trigger: CCATAGTGAAGGACTGTTGCAGATAGCATCAGGGCC...GGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR GCA 90 bp CACTTCAGTGATTACAACCCACCCTGGCTGGTGAGGCAGAATTATAATAAGCATTCCTGCCACGGCTGCTaGCTGGGCAGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HFSDYNPPWLVRQNYNKHSCHGC*LGSCCS
Trigger: GCTGCAGCAGCTGCCCAGGCAGCAGCCGTGGCAGGA...ATGCTTATTATAATTCTGCCTCACCAGCCAGGGTGGGTTGTAATCACTGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593223.1
CDS-3UTR CCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATGGGGGCCTCTCTCGCTaGGCGCCTGGCTCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDGGLSR*APGSPH
Trigger: GTGAGGGGAGCCAGGCGCCCAGCGAGAGAGGCCCCC...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000342988.8
CDS-3UTR CCA 90 bp CTGGGCAGCTGCTGCAGCTTGTGCAGTAGCCGCCTGCTGCTGCATCTGTCGATGTGCACGATTACTTGGTaGATGCTGGATGGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: LGSCCSLCSSRLLLHLSMCTITW*MLDGLN
Trigger: ATTCAAACCATCCAGCATCCACCAAGTAATCGTGCA...CATCGACAGATGCAGCAGCAGGCGGCTACTGCACAAGCTGCAGCAGCTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR CCA 90 bp ACGGTAAAAGACCTCAGTCTAAAGGTTGTGGGTCTGCAATCGGCATGGTATGAAGCCACGGCTGCTGCCTaGGCAGCTGCTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: TVKDLSLKVVGLQSAWYEATAAA*AAAAAC
Trigger: ACAAGCTGCAGCAGCTGCCCAGGCAGCAGCCGTGGC...TTCATACCATGCCGATTGCAGACCCACAACCTTTAGACTGAGGTCTTTTACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR CCA 90 bp CTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTATTTGATGCTCTGTCTTaGGTAATCCGGTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LQSAWYEVLRLGAGGPGVFDALS*VIRSPA
Trigger: GGCTGGGGACCGGATTACCCAAGACAGAGCATCAAA...TACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR CCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATAGCAGAAGCTACGAGTaGCTCTTCTCTGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDSRSYE*LFSGFW
Trigger: CCAGAAGCCAGAGAAGAGCCACTCGTAGCTTCTGCT...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GCTGACAGACTGATAGCTGGAGCTATTCCACCTACTGATCCTGGGCCAGGGATGGCAATCGGCATGGTATaGAGTACTTCGTCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: ADRLIAGAIPPTDPGPGMAIGMV*STSSRS
Trigger: GCTCCTAGACGAAGTACTTCATACCATGCCGATTGC...CATCCCTGGCCCAGGATCAGTAGGTGGAATAGCTCCAGCTATCAGTCTGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR GCA 90 bp CTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTACTAACAGAGCTGGGGTaGTGTATGTCTCTGTCGATG +
Preference number: 4 (lower is better)
Translates to: LQSAWYEVLRLGAGGPGVLTELG*CMSLSM
Trigger: CATCGACAGAGACATACAGCACCCCAGCTCTGTTAG...TACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR GCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAATGCTGCCTGGGCAGCTaGTGCAGCTTGTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEECCLGS*CSLCSS
Trigger: GCTACTGCACAAGCTGCAGCAGCTGCCCAGGCAGCA...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp CACTTCAGTGATTACAACCCACCCTGGCTGGTGAGGCAGAATTATAATAAGCATGCCAGGGATGTTTCCTaGCACGGCTGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HFSDYNPPWLVRQNYNKHARDVS*HGCCLG
Trigger: GCCCAGGCAGCAGCCGTGGCAGGAAACATCCCTGGC...ATGCTTATTATAATTCTGCCTCACCAGCCAGGGTGGGTTGTAATCACTGAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593223.1
CDS-3UTR CCA 90 bp CACTTCAGTGATTACAACCCACCCTGGCTGGTGAGGCAGAATTATAATAAGCATGCCACGGCTGCTGCCTaGGCAGCTGCTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: HFSDYNPPWLVRQNYNKHATAAA*AAAAAC
Trigger: ACAAGCTGCAGCAGCTGCCCAGGCAGCAGCCGTGGC...ATGCTTATTATAATTCTGCCTCACCAGCCAGGGTGGGTTGTAATCACTGAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593223.1
CDS-3UTR CCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCAGTTCAAGACCAGCCTaGCCAACAGGCAAAACCCCG +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPSSRPA*PTGKTP
Trigger: CGGGGTTTTGCCTGTTGGCCAGGCTGGTCTTGAACT...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATGGCACTGGACAAACATaGAATGAGGTCTTACGGTGG +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDGTGQT*NEVLRW
Trigger: CCACCGTAAGACCTCATTCCATGTTTGTCCAGTGCC...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATACTTTAGCTACTCCTTaGGGCAGGATGTCAGACCCT +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDTLATP*GRMSDP
Trigger: AGGGTCTGACATCCTGCCCCAAGGAGTAGCTAAAGT...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATCTTTGCAACAGCAGCTaGTTTCATCCCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDLCNSS*FHPFLS
Trigger: GGAGAGGAAGGGATGAAACCAGCTGCTGTTGCAAAG...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CAA 72 bp GCCACAAAGGAACTCCTGGGACTTTCAACTGACCAGTaGTCCCCAAAGCAGAAGCTACGAGTGGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ATKELLGLSTDQ*SPKQKLRVALL
Trigger: GAGAAGAGCCACTCGTAGCTTCTGCTTTGGGGACAACTGGTCAGTTGAAAGTCCCAGGAGTTCCTTTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp CTAAAGGTTGTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTTCCTGGCTGAGGCCCTaGTGCTATCTGCAACAGTCC +
Preference number: 4 (lower is better)
Translates to: LKVVGLQSAWYEVLRLGASWLRP*CYLQQS
Trigger: GGACTGTTGCAGATAGCATCAGGGCCTCAGCCAGGA...AGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCACAACCTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR TCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTGGACAAACATGGAATaGGGTCTTACGGTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDWTNME*GLTVGV
Trigger: TACACCCACCGTAAGACCTCATTCCATGTTTGTCCA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp TTCCTTACTAGAATAAAGCCAAGCACTTCAGTGATTACAACCCACCCTGGCTGGTGCTGCCTGGGCAGCTaGTGCAGCTTGTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: FLTRIKPSTSVITTHPGWCCLGS*CSLCSS
Trigger: GCTACTGCACAAGCTGCAGCAGCTGCCCAGGCAGCA...CCAGCCAGGGTGGGTTGTAATCACTGAAGTGCTTGGCTTTATTCTAGTAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593223.1
CDS-3UTR GCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATTCCTGCCACGGCTGCTaGCTGGGCAGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDSCHGC*LGSCCS
Trigger: GCTGCAGCAGCTGCCCAGGCAGCAGCCGTGGCAGGA...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp CTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTATCAAGCTCTGAGCCATaGCTGACAAGTTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LQSAWYEVLRLGAGGPGVSSSEP*LTSSEE
Trigger: CTCTTCAGAACTTGTCAGGCATGGCTCAGAGCTTGA...TACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR GCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTCCAGACAACGGTATTaGCTCTGGCTACTGATGCTA +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDSRQRY*LWLLML
Trigger: TAGCATCAGTAGCCAGAGGCAATACCGTTGTCTGGA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTTCAGTGGACAACGATaGCTGTCCCTCAAAGTCATG +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDFSGQR*LSLKVM
Trigger: CATGACTTTGAGGGACAGCCATCGTTGTCCACTGAA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATCGATGCACGATTACTTaGTGGATGCTGGATGGTTTG +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDRCTIT*WMLDGL
Trigger: CAAACCATCCAGCATCCACCAAGTAATCGTGCATCG...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTCAATCCAGCTGTACAAAGACCGCGTaGTCACTAAGGCACCTGACC +
Preference number: 4 (lower is better)
Translates to: EVLRLGAGGPGVSEFQSSCTKTA*SLRHLT
Trigger: GGTCAGGTGCCTTAGTGACCACGCGGTCTTTGTACA...GCTGGATTGAAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR TCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAATTCCGACCAGCCACCTaGAGCCTCCCATCCAATGTT +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEFRPAT*SLPSNV
Trigger: AACATTGGATGGGAGGCTTCAGGTGGCTGGTCGGAA...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTGGACATTGGAGAGTTaGCCCAAACAAAAGCGATCT +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDWTLES*PKQKRS
Trigger: AGATCGCTTTTGTTTGGGTCAACTCTCCAATGTCCA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp ATTCCAGCAGCAGCTGACAGACTGATAGCTGGAGCTATTCCACCTACTGATCCTAGCTATTCCACCTACTaGTCCTGGGCCAGGGATGTT +
Preference number: 4 (lower is better)
Translates to: IPAAADRLIAGAIPPTDPSYSTY*SWARDV
Trigger: AACATCCCTGGCCCAGGATCAGTAGGTGGAATAGCT...AGGATCAGTAGGTGGAATAGCTCCAGCTATCAGTCTGTCAGCTGCTGCTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR TCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCAGGGCCCGGTGTAAGTaGATTTCAATCCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPRARCK*ISIQQG
Trigger: ACCTTGCTGGATTGAAATTCACTTACACCGGGCCCT...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTCAATCCAGCAGGGCCCGGTGTAAGTaGATTTCAATCCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: EVLRLGAGGPGVSEFQSSRARCK*ISIQQG
Trigger: ACCTTGCTGGATTGAAATTCACTTACACCGGGCCCT...GCTGGATTGAAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR TCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCGCTCTGAGCCATGCCTaGCAAGTTCTGAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPALSHA*QVLKRK
Trigger: TTTCCTCTTCAGAACTTGTCAGGCATGGCTCAGAGC...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GCCCCAACGGTAAAAGACCTCAGTCTAAAGGTTGTGGGTCTGCAATCGGCATGGCTAATCTTCAAGCTCTaGGCCATGCCTGACAAGTTC +
Preference number: 4 (lower is better)
Translates to: APTVKDLSLKVVGLQSAWLIFKL*AMPDKF
Trigger: GAACTTGTCAGGCATGGCTCAGAGCTTGAAGATTAG...CCATGCCGATTGCAGACCCACAACCTTTAGACTGAGGTCTTTTACCGTTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR TCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATATCAATCCAAGCCCGTaGGTCCTTCTATCAATGACA +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDINPSP*VLLSMT
Trigger: TGTCATTGATAGAAGGACTCACGGGCTTGGATTGAT...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCAGAACAGGGGTTGAATaGATCACTAGTTATGCCTTC +
Preference number: 4 (lower is better)
Translates to: VGLQSAWYEVLRLGAGGPRTGVE*ITSYAF
Trigger: GAAGGCATAACTAGTGATTCATTCAACCCCTGTTCT...GGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR GCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAACCAGGGCCGTGTTGTTaGTGCCAACTTGTCGAGAAG +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEPGPCC*CQLVEK
Trigger: CTTCTCGACAAGTTGGCAGCAACAACACGGCCCTGG...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342988.8
CDS-3UTR GCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAATCCGCTCTCCCGCGCTaGTGGTCCGCGGACGCACCG +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQESALPR*WSADAP
Trigger: CGGTGCGTCCGCGGACCAGCAGCGCGGGAGAGCGGA...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342988.8
CDS-3UTR GCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCGGCCCTGATGCTATCTaGAACAGTCCTTCACTATGG +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPGPDAI*NSPSLW
Trigger: CCATAGTGAAGGACTGTTGCAGATAGCATCAGGGCC...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCCCAACTGCACACCTTTaGCTATGTGCAACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPPTAHL*LCATLL
Trigger: GAGCAAGGTTGCACATAGGCAAAGGTGTGCAGTTGG...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTCAATCCAGCCCAACTGCACACCTTTaGCTATGTGCAACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: EVLRLGAGGPGVSEFQSSPTAHL*LCATLL
Trigger: GAGCAAGGTTGCACATAGGCAAAGGTGTGCAGTTGG...GCTGGATTGAAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR GCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAAAACAGCATCTCCAGGTaGACGCCCAGCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEENSISR*TPSFSV
Trigger: GACAGAGAAGCTGGGCGTGCACCTGGAGATGCTGTT...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTATCCTGCCACGGCTGCTaGCTGGGCAGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVSCHGC*LGSCCS
Trigger: GCTGCAGCAGCTGCCCAGGCAGCAGCCGTGGCAGGA...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTGCCAGGGATGTTTCCTaGCACGGCTGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSARDVS*HGCCLG
Trigger: GCCCAGGCAGCAGCCGTGGCAGGAAACATCCCTGGC...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTTGTTGTGTGTTGTTTaGTGGTGTCCTCCAGACAAC +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDLLCVV*WCPPDN
Trigger: GTTGTCTGGAGGACACCAGCAAACAACACACAACAA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAAGGGCAAACTAGAGAGTaGAACTGTCTGGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEGQTRE*NCLAQP
Trigger: GGGTTGGGCCAGACAGTTGCACTCTCTAGTTTGCCC...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATGAAGAAATCCAAAACTaGTGCAAGGTAGCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDEEIQN*CKVAKV
Trigger: GACCTTGGCTACCTTGCAGCAGTTTTGGATTTCTTC...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAACTCTCGCTGGGCGCCTaGCTCCCCTCACCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQELSLGA*LPSPAP
Trigger: GGGAGCGGGTGAGGGGAGCCAGGCGCCCAGCGAGAG...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342988.8
CDS-3UTR CCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAGTATTCAGGATAACCTaGGCTCGGGCGGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLVFRIT*ARAVAR
Trigger: CCTCGCCACCGCCCGAGCCCAGGTTATCCTGAATAC...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342988.8
CDS-3UTR CCA 90 bp TCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAACGATGCACGATTACTTaGTGGATGCTGGATGGTTTG +
Preference number: 4 (lower is better)
Translates to: SAWYEVLRLGAGGPGVSERCTIT*WMLDGL
Trigger: CAAACCATCCAGCATCCACCAAGTAATCGTGCATCG...TTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR CCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATAGGGGAGGAAACAGTTaGGAAATACCACCACCAAAT +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDRGGNS*EIPPPN
Trigger: ATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCT...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GCTGACAGACTGATAGCTGGAGCTATTCCACCTACTGATCCTGGGCCAGGGATGTTTAGTTCATTTTTGTaGAGATCAGGCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: ADRLIAGAIPPTDPGPGMFSSFL*RSGHLQ
Trigger: CTGGAGGTGGCCTGATCTTCACAAAAATGAACTAAA...CATCCCTGGCCCAGGATCAGTAGGTGGAATAGCTCCAGCTATCAGTCTGTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR TCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAATACTCAGGAGCAGGATaGTTGGAAATGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEYSGAG*LEMGGW
Trigger: CCAGCCTCCCATTTCCAATCATCCTGCTCCTGAGTA...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp CTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTATCACAAAACTCATCCTaGGTATGCATAAGCGACGAA +
Preference number: 4 (lower is better)
Translates to: LQSAWYEVLRLGAGGPGVSQNSS*VCISDE
Trigger: TTCGTCGCTTATGCATACTCAGGATGAGTTTTGTGA...TACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR TCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATGCAGCACAGCTAATATaGGTTCAGTTTACTCACATG +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDAAQLI*VQFTHM
Trigger: CATGTGAGTAAACTGAACTCATATTAGCTGTGCTGC...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTGCATTACTTTAAGCTaGGTGTACCCCACCTACAAA +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDCITLS*VYPTYK
Trigger: TTTGTAGGTGGGGTACACTCAGCTTAAAGTAATGCA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTCTATCTCAACTACCTaGAACTCAGCAAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDSISTT*NSARIR
Trigger: CCTGATTCTTGCTGAGTTTCAGGTAGTTGAGATAGA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCGAAAGCCTTAAACTCTaGCCTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPESLKL*PVCVCV
Trigger: CACACACACACACACAGGTCAGAGTTTAAGGCTTTC...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAACCTGGGACTTTCAACTaGCCAGTTGTCCCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEPGTFN*PVVPKA
Trigger: TGCTTTGGGGACAACTGGTCAGTTGAAAGTCCCAGG...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp CTAAAGGTTGTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTAATTCCAGCAGCAGCTaGCAGACCACACTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LKVVGLQSAWYEVLRLGANSSSS*QTTLKR
Trigger: CCTCTTCAGTGTGGTCTGTCAGCTGCTGCTGGAATT...AGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCACAACCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR GCA 90 bp GCTGACAGACTGATAGCTGGAGCTATTCCACCTACTGATCCTGGGCCAGGGATGTGTCCCTCAAAGTCATaGACATATTCATCCTTCACC +
Preference number: 4 (lower is better)
Translates to: ADRLIAGAIPPTDPGPGMCPSKS*TYSSFT
Trigger: GGTGAAGGATGAATATGTGCATGACTTTGAGGGACA...CATCCCTGGCCCAGGATCAGTAGGTGGAATAGCTCCAGCTATCAGTCTGTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR CCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCTTGAATGTCCTTCAGTaGACAACGATGGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPLNVLQ*TTMAVP
Trigger: AGGGACAGCCATCGTTGTCCACTGAAGGACATTCAA...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTGCACGATTACTTGGTaGATGCTGGATGGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDCTITW*MLDGLN
Trigger: ATTCAAACCATCCAGCATCCACCAAGTAATCGTGCA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp CTAAAGGTTGTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTTGGCAGGCTGACTTGTaGAAGCCACAGGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: LKVVGLQSAWYEVLRLGAWQADL*KPQECW
Trigger: CCAACATTCCTGTGGCTTCCACAAGTCAGCCTGCCA...AGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCACAACCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR CCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAGCCACGGCTGCTGCCTaGGCAGCTGCTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVATAAA*AAAAAC
Trigger: ACAAGCTGCAGCAGCTGCCCAGGCAGCAGCCGTGGC...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp ATCCTGAGTATGCATAAGCGACGAAGGTCATCAACACCAATTCCAGCAGCAGCTTTTGATGCTCTGTCTTaGGTAATCCGGTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: ILSMHKRRRSSTPIPAAAFDALS*VIRSPA
Trigger: GGCTGGGGACCGGATTACCCAAGACAGAGCATCAAA...AGCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR CCA 90 bp TCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAAGGTCTGCAATCGGCATaGTATGAAGTACTTCGTCTA +
Preference number: 4 (lower is better)
Translates to: SAWYEVLRLGAGGPGVSEGLQSA*YEVLRL
Trigger: TAGACGAAGTACTTCATACCATGCCGATTGCAGACC...TTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR CCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCCACATGTCTCAAGTATaGCTCTCCTTAAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPHMSQV*LSLSQT
Trigger: GGTCTGGCTTAAGGAGAGCCATACTTGAGACATGTG...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTACAGCTACCACAAAGCTaGCCTCTACCAGGACTCCCC +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLQLPQS*PLPGLP
Trigger: GGGGAGTCCTGGTAGAGGCCAGCTTTGTGGTAGCTG...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AATCCAGCAAGGTGTTTCTTTGATGCTCTGTCTTGGGTAATCCGGTCCCCAGCCGAGATCAATTCCAGGTaGTACAACTCGTTCGTAGTG +
Preference number: 4 (lower is better)
Translates to: NPARCFFDALSWVIRSPAEINSR*YNSFVV
Trigger: CACTACGAACGAGTTGTATCACCTGGAATTGATCTC...GGCTGGGGACCGGATTACCCAAGACAGAGCATCAAAGAAACACCTTGCTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR TCA 90 bp GAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTCAATCCAGCCTTCACCATCATACTTaGTGGAGCATTACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: EVLRLGAGGPGVSEFQSSLHHHT*WSITLQ
Trigger: CTGCAGAGTAATGCTCCATCAAGTATGATGGTGAAG...GCTGGATTGAAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR TCA 90 bp CTGAGTATGCATAAGCGACGAAGGTCATCAACACCAATTCCAGCAGCAGCTGACTGGCCGTTTTGGTGGTaGGGCAAATTAGGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: LSMHKRRRSSTPIPAAADWPFWW*GKLGVY
Trigger: ATACACACCTAATTTGCCTCACCACCAAAACGGCCA...GTCAGCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR TCA 90 bp ACGGTAAAAGACCTCAGTCTAAAGGTTGTGGGTCTGCAATCGGCATGGTATGAAAGCTATTCCACCTACTaGTCCTGGGCCAGGGATGTT +
Preference number: 4 (lower is better)
Translates to: TVKDLSLKVVGLQSAWYESYSTY*SWARDV
Trigger: AACATCCCTGGCCCAGGATCAGTAGGTGGAATAGCT...TTCATACCATGCCGATTGCAGACCCACAACCTTTAGACTGAGGTCTTTTACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR TCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAAAGGGCCCGGTGTAAGTaGATTTCAATCCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEERARCK*ISIQQG
Trigger: ACCTTGCTGGATTGAAATTCACTTACACCGGGCCCT...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp CTAAAGGTTGTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTAGGGCCCGGTGTAAGTaGATTTCAATCCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: LKVVGLQSAWYEVLRLGARARCK*ISIQQG
Trigger: ACCTTGCTGGATTGAAATTCACTTACACCGGGCCCT...AGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCACAACCTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR TCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAAGCAATCGGCATGGTATaGAGTACTTCGTCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEAIGMV*STSSRS
Trigger: GCTCCTAGACGAAGTACTTCATACCATGCCGATTGC...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCCTCTCAGAAAGGGTGTaGACTAATGTGACTCTGCAT +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPLSERV*TNVTLH
Trigger: ATGCAGAGTCACATTAGTTCACACCCTTTCTGAGAG...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTCAAACTATGCACAATaGTCAGACAGGCATCATTAC +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDSNYAQ*SDRHHY
Trigger: GTAATGATGCCTGTCTGAGCATTGTGCATAGTTTGA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp TCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAAGATGGAGCATTACTCTaGAGTGTTAATCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: SAWYEVLRLGAGGPGVSEDGALL*SVNPER
Trigger: TCTCTCAGGATTAACACTGCAGAGTAATGCTCCATC...TTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR GCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCGTATGTCTCTGTCGATaGACGATTACTTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPVCLCR*TITWWM
Trigger: CATCCACCAAGTAATCGTGCATCGACAGAGACATAC...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp AATCCAGCAAGGTGTTTCTTTGATGCTCTGTCTTGGGTAATCCGGTCCCCAGCCGTATGTCTCTGTCGATaGACGATTACTTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: NPARCFFDALSWVIRSPAVCLCR*TITWWM
Trigger: CATCCACCAAGTAATCGTGCATCGACAGAGACATAC...GGCTGGGGACCGGATTACCCAAGACAGAGCATCAAAGAAACACCTTGCTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR GCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAGTCCTTCACTATGGCTaGCCCCCAGTATACTGGCAG +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLVLHYG*PPVYWQ
Trigger: CTGCCAGTATACTGGGGGGCAGCCATAGTGAAGGAC...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTCAATCCAGCCCTTTACATTCCAACTaGACACCTTTGCCTATGTGC +
Preference number: 4 (lower is better)
Translates to: EVLRLGAGGPGVSEFQSSPLHSN*TPLPMC
Trigger: GCACATAGGCAAAGGTGTGCAGTTGGAATGTAAAGG...GCTGGATTGAAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR GCA 90 bp CACTTCAGTGATTACAACCCACCCTGGCTGGTGAGGCAGAATTATAATAAGCATAACAGCATCTCCAGGTaGACGCCCAGCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: HFSDYNPPWLVRQNYNKHNSISR*TPSFSV
Trigger: GACAGAGAAGCTGGGCGTGCACCTGGAGATGCTGTT...ATGCTTATTATAATTCTGCCTCACCAGCCAGGGTGGGTTGTAATCACTGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593223.1
CDS-3UTR GCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTTGCTGCCTGGGCAGCTaGTGCAGCTTGTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSCCLGS*CSLCSS
Trigger: GCTACTGCACAAGCTGCAGCAGCTGCCCAGGCAGCA...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATAATAGAACTGGCTGTTaGCTGTCATTTAGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDNRTGC*LSFSRR
Trigger: CCTTCTACTAAATGACAGGCAACAGCCAGTTCTATT...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTTTCAGTGGACAACGATaGCTGTCCCTCAAAGTCATG +
Preference number: 4 (lower is better)
Translates to: AWYEVLRLGAGGPGVSEFFSGQR*LSLKVM
Trigger: CATGACTTTGAGGGACAGCCATCGTTGTCCACTGAA...AAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR CCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTTGGTGGATGCTGGATaGTTTGAATTGAATGTCCTT +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDLVDAG*FELNVL
Trigger: AAGGACATTCAATTCAAACCATCCAGCATCCACCAA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCCTGTCCTGTGGACATTaGAGAGTTGACCCAAACAAA +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPLSCGH*RVDPNK
Trigger: TTTGTTTGGGTCAACTCTCCAATGTCCACAGGACAG...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCGGTCTGCAATCGGCATaGTATGAAGTACTTCGTCTA +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPGLQSA*YEVLRL
Trigger: TAGACGAAGTACTTCATACCATGCCGATTGCAGACC...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATATCCTTTGGAAACAGTaGAAAACAACAGCTAACGTT +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDILWKQ*KTTANV
Trigger: AACGTTAGCTGTTGTTTTTCACTGTTTCCAAAGGAT...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp TGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTCAATGGCCGTTTTGGTGGTaGGGCAAATTAGGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: WYEVLRLGAGGPGVSEFQWPFWW*GKLGVY
Trigger: ATACACACCTAATTTGCCTCACCACCAAAACGGCCA...TTGAAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR TCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATATAGGCGGGTGGTGCTaGAGATGGCCGTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDIGGWC*RWPFWW
Trigger: CCACCAAAACGGCCATCTTCAGCACCACCCGCCTAT...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp CACTTCAGTGATTACAACCCACCCTGGCTGGTGAGGCAGAATTATAATAAGCATAGCTATTCCACCTACTaGTCCTGGGCCAGGGATGTT +
Preference number: 4 (lower is better)
Translates to: HFSDYNPPWLVRQNYNKHSYSTY*SWARDV
Trigger: AACATCCCTGGCCCAGGATCAGTAGGTGGAATAGCT...ATGCTTATTATAATTCTGCCTCACCAGCCAGGGTGGGTTGTAATCACTGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593223.1
CDS-3UTR TCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCTCACAAAACTCATCCTaGGTATGCATAAGCGACGAA +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPSQNSS*VCISDE
Trigger: TTCGTCGCTTATGCATACTCAGGATGAGTTTTGTGA...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AATCCAGCAAGGTGTTTCTTTGATGCTCTGTCTTGGGTAATCCGGTCCCCAGCCAGCAAGGTGTTTCTTTaGTGCTCTGTCTTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: NPARCFFDALSWVIRSPASKVFL*CSVLGN
Trigger: ATTACCCAAGACAGAGCATCAAAGAAACACCTTGCT...GGCTGGGGACCGGATTACCCAAGACAGAGCATCAAAGAAACACCTTGCTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR TCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAACCCAGAGAAGATAAATaGCTTGCCCAAAGGTCACAC +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEPREDK*LAQRSH
Trigger: GTGTGACCTTTGGGCAAGTCATTTATCTTCTCTGGG...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTACCTGGGACTTTCAACTaGCCAGTTGTCCCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLPGTFN*PVVPKA
Trigger: TGCTTTGGGGACAACTGGTCAGTTGAAAGTCCCAGG...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp TTCCTTACTAGAATAAAGCCAAGCACTTCAGTGATTACAACCCACCCTGGCTGGACCCACCCTGGCTGGTaGGGCAGAATTATAATAAGC +
Preference number: 4 (lower is better)
Translates to: FLTRIKPSTSVITTHPGWTHPGW*GRIIIS
Trigger: GCTTATTATAATTCTGCCTCACCAGCCAGGGTGGGT...CCAGCCAGGGTGGGTTGTAATCACTGAAGTGCTTGGCTTTATTCTAGTAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593223.1
CDS-3UTR TCA 90 bp CACTTCAGTGATTACAACCCACCCTGGCTGGTGAGGCAGAATTATAATAAGCATAGCCAAGCACTTCAGTaGTTACAACCCACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HFSDYNPPWLVRQNYNKHSQALQ*LQPTLA
Trigger: AGCCAGGGTGGGTTGTAATCACTGAAGTGCTTGGCT...ATGCTTATTATAATTCTGCCTCACCAGCCAGGGTGGGTTGTAATCACTGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593223.1
CDS-3UTR TCA 90 bp ATCCTGAGTATGCATAAGCGACGAAGGTCATCAACACCAATTCCAGCAGCAGCTAATCAAAGACCAGGATaGTTGGAAATGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ILSMHKRRRSSTPIPAAANQRPG*LEMGGW
Trigger: CCAGCCTCCCATTTCCAATCATCCTGGTCTTTGATT...AGCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR GCA 90 bp ATTCCAGCAGCAGCTGACAGACTGATAGCTGGAGCTATTCCACCTACTGATCCTTGGCACATCAAACTATaGACAATGCTCAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: IPAAADRLIAGAIPPTDPWHIKL*TMLRQA
Trigger: TGCCTGTCTGAGCATTGTGCATAGTTTGATGTGCCA...AGGATCAGTAGGTGGAATAGCTCCAGCTATCAGTCTGTCAGCTGCTGCTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR GCA 90 bp GTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCTTCAATTGCTCTTTTTaGAAATGTTTCACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VGLQSAWYEVLRLGAGGPFNCSF*KCFTLS
Trigger: GGAGAGAGTGAAACATTTGCAAAAAGAGCAATTGAA...GGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR GCA 90 bp CTGAGTATGCATAAGCGACGAAGGTCATCAACACCAATTCCAGCAGCAGCTGACATTAGGTGTGTATGGTaGAGTCCTACTTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: LSMHKRRRSSTPIPAAADIRCVW*SPTSSP
Trigger: TGGACTGGAAGTAGGACTGCACCATACACACCTAAT...GTCAGCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR GCA 90 bp TGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTCAAGCCTATGTGCAACCTTaGTCTCTCAATGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: WYEVLRLGAGGPGVSEFQAYVQP*SLNGFC
Trigger: ACAGAAGCCATTGAGAGAGCAAGGTTGCACATAGGC...TTGAAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR GCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAATCAAGCTCTGAGCCATaGCTGACAAGTTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEESSSEP*LTSSEE
Trigger: CTCTTCAGAACTTGTCAGGCATGGCTCAGAGCTTGA...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATATAGTCAAAGATACCTaGAACTCACCTTCCTACAAT +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDIVKDT*NSPSYN
Trigger: ATTGTAGGAAGGTGAGTTGCAGGTATCTTTGACTAT...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAATCCAGACAACGGTATTaGCTCTGGCTACTGATGCTA +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEESRQRY*LWLLML
Trigger: TAGCATCAGTAGCCAGAGGCAATACCGTTGTCTGGA...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTCAATCCAGCTCTCCACCTTGTCTATaGCACATCAAACTATGCACA +
Preference number: 4 (lower is better)
Translates to: EVLRLGAGGPGVSEFQSSSPPCL*HIKLCT
Trigger: TGTGCATAGTTTGATGTGCCATAGACAAGGTGGAGA...GCTGGATTGAAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR CCA 90 bp ATCCTGAGTATGCATAAGCGACGAAGGTCATCAACACCAATTCCAGCAGCAGCTTTGAATGTCCTTCAGTaGACAACGATGGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: ILSMHKRRRSSTPIPAAALNVLQ*TTMAVP
Trigger: AGGGACAGCCATCGTTGTCCACTGAAGGACATTCAA...AGCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR CCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAGCCACGGCTGCTGCCTaGGCAGCTGCTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEATAAA*AAAAAC
Trigger: ACAAGCTGCAGCAGCTGCCCAGGCAGCAGCCGTGGC...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTGGTCTGCAATCGGCATaGTATGAAGTACTTCGTCTA +
Preference number: 4 (lower is better)
Translates to: AWYEVLRLGAGGPGVSEFGLQSA*YEVLRL
Trigger: TAGACGAAGTACTTCATACCATGCCGATTGCAGACC...AAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR CCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATGTGGTGCTAGGCCTTTaGTTAAAATTAAGTCTTAAG +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDVVLGL*LKLSLK
Trigger: CTTAAGACTTAATTTTAACCAAAGGCCTAGCACCAC...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTACACCACTTAGGAGGGTaGTGTCACACACACCAACTC +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLHHLGG*CHTHQL
Trigger: GAGTTGGTGTGTGTGACACCACCCTCCTAAGTGGTG...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATCAGCTACCACAAAGCTaGCCTCTACCAGGACTCCCC +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDQLPQS*PLPGLP
Trigger: GGGGAGTCCTGGTAGAGGCCAGCTTTGTGGTAGCTG...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAACCACAAAGGAACTCCTaGGACTTTCAACTGACCAGT +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEPQRNS*DFQLTS
Trigger: ACTGGTCAGTTGAAAGTCCCAGGAGTTCCTTTGTGG...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAAGAGATCAATTCCAGGTaGTACAACTCGTTCGTAGTG +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEEINSR*YNSFVV
Trigger: CACTACGAACGAGTTGTATCACCTGGAATTGATCTC...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAACTTCACCATCATACTTaGTGGAGCATTACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEELHHHT*WSITLQ
Trigger: CTGCAGAGTAATGCTCCATCAAGTATGATGGTGAAG...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp CTGAGTATGCATAAGCGACGAAGGTCATCAACACCAATTCCAGCAGCAGCTGACCTGGATGGTTTGAATTaGATGTCCTTCAGTGGACAA +
Preference number: 4 (lower is better)
Translates to: LSMHKRRRSSTPIPAAADLDGLN*MSFSGQ
Trigger: TTGTCCACTGAAGGACATTCAATTCAAACCATCCAG...GTCAGCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR TCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAAGGATGCTGGATGGTTTaGATTGAATGTCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEGCWMV*IECPSV
Trigger: CACTGAAGGACATTCAATTCAAACCATCCAGCATCC...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp CTAAAGGTTGTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGATGCTGGATGGTTTaGATTGAATGTCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LKVVGLQSAWYEVLRLGAGCWMV*IECPSV
Trigger: CACTGAAGGACATTCAATTCAAACCATCCAGCATCC...AGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCACAACCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR TCA 90 bp CCTTTCACAAAACTCATCCTGAGTATGCATAAGCGACGAAGGTCATCAACACCAGCAATCGGCATGGTATaGAGTACTTCGTCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: PFTKLILSMHKRRRSSTPAIGMV*STSSRS
Trigger: GCTCCTAGACGAAGTACTTCATACCATGCCGATTGC...TGGTGTTGATGACCTTCGTCGCTTATGCATACTCAGGATGAGTTTTGTGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR TCA 90 bp CCTTTCACAAAACTCATCCTGAGTATGCATAAGCGACGAAGGTCATCAACACCAGCTCTGAGCCATGCCTaGCAAGTTCTGAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PFTKLILSMHKRRRSSTPALSHA*QVLKRK
Trigger: TTTCCTCTTCAGAACTTGTCAGGCATGGCTCAGAGC...TGGTGTTGATGACCTTCGTCGCTTATGCATACTCAGGATGAGTTTTGTGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR TCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCCAAATGCCAATACAATaGGGTCTTTTTCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPQMPIQ*GLFQHF
Trigger: GAAGTGCTGAAAAAGACCTCATTGTATTGGCATTTG...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAACCATTACTTTCAGGTTaGACAAGAACACTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEPLLSG*TRTLAL
Trigger: CAGAGCCAGTGTTCTTGTTCAACCTGAAAGTAATGG...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAAGAGTCCTTCTATCAATaGCAAGCAGCCTTTGCAACA +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEESFYQ*QAAFAT
Trigger: TGTTGCAAAGGCTGCTTGTCATTGATAGAAGGACTC...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATGGGCCGTGTTGTTGCTaGCAACTTGTCGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDGPCCC*QLVEKP
Trigger: TGGCTTCTCGACAAGTTGGCAGCAACAACACGGCCC...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342988.8
CDS-3UTR GCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCTCAAACTATGCACAATaGTCAGACAGGCATCATTAC +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPSNYAQ*SDRHHY
Trigger: GTAATGATGCCTGTCTGAGCATTGTGCATAGTTTGA...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTTCAATTGCTCTTTTTaGAAATGTTTCACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDFNCSF*KCFTLS
Trigger: GGAGAGAGTGAAACATTTGCAAAAAGAGCAATTGAA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATGTCCTTCACTATGGCTaGCCCCCAGTATACTGGCAG +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDVLHYG*PPVYWQ
Trigger: CTGCCAGTATACTGGGGGGCAGCCATAGTGAAGGAC...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp TGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTCAAACACCTTTGCCTATGTaGAACCTTGCTCTCTCAATG +
Preference number: 4 (lower is better)
Translates to: WYEVLRLGAGGPGVSEFQTPLPM*NLALSM
Trigger: CATTGAGAGAGCAAGGTTGCACATAGGCAAAGGTGT...TTGAAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR GCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAAGCCTTGCCAGGCGTTaGAAGTGTGAGTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLSLARR*KCEWIL
Trigger: CAAAATCCACTCACACTTGCAACGCCTGGCAAGGCT...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398417.6
CDS-3UTR CCA 90 bp GCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTCAAATTAGGTGTGTATaGTGCAGTCCTACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: AWYEVLRLGAGGPGVSEFQIRCV*CSPTSS
Trigger: ACTGGAAGTAGGACTGCACCATACACACCTAATTTG...AAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR CCA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATCTTTATATATGCACTTaGGTAGATCTTATGAACAGC +
Preference number: 4 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDLYICT*VDLMNS
Trigger: GCTGTTCATAAGATCTACCCAAGTGCATATATAAAG...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAGATACACAATGTCCATaGGGAAGTCCCGGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLDTQCP*GSPGRV
Trigger: CACTCTACCGGGACTTCCCCATGGACATTGTGTATC...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATAGTTCAAGACCAGCCTaGCCAACAGGCAAAACCCCG +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDSSRPA*PTGKTP
Trigger: CGGGGTTTTGCCTGTTGGCCAGGCTGGTCTTGAACT...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAAAGAAACCAAGACAGGTaGCTTGGCTCCAAAGAGATA +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEERNQDR*LGSKEI
Trigger: TATCTCTTTGGAGCCAAGCCACCTGTCTTGGTTTCT...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GTGAATTTCAATCCAGCAAGGTGTTTCTTTGATGCTCTGTCTTGGGTAATCCGGTTATGCCTTCAGACGTaGAAGATGGGTGCCACGTGT +
Preference number: 4 (lower is better)
Translates to: VNFNPARCFFDALSWVIRLCLQT*KMGATC
Trigger: ACACGTGGCACCCATCTTCCACGTCTGAAGGCATAA...CCGGATTACCCAAGACAGAGCATCAAAGAAACACCTTGCTGGATTGAAATTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR CCA 90 bp TTCCTTACTAGAATAAAGCCAAGCACTTCAGTGATTACAACCCACCCTGGCTGGGATTACAACCCACCCTaGCTGGTGAGGCAGAATTAT +
Preference number: 4 (lower is better)
Translates to: FLTRIKPSTSVITTHPGWDYNPP*LVRQNY
Trigger: ATAATTCTGCCTCACCAGCCAGGGTGGGTTGTAATC...CCAGCCAGGGTGGGTTGTAATCACTGAAGTGCTTGGCTTTATTCTAGTAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593223.1
3UTR CAA 72 bp AACTGTCTGGCCCAACCCAGAGCCATTACTTTCAGGTaGAACAAGAACACTGGCTCTGGACCTATTGAGAAA +
Preference number: 4 (lower is better)
Translates to: NCLAQPRAITFR*NKNTGSGPIEK
Trigger: TTTCTCAATAGGTCCAGAGCCAGTGTTCTTGTTCAACCTGAAAGTAATGGCTCTGGGTTGGGCCAGACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAATCACAAAACTCATCCTaGGTATGCATAAGCGACGAA +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEESQNSS*VCISDE
Trigger: TTCGTCGCTTATGCATACTCAGGATGAGTTTTGTGA...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp CCAACGGTAAAAGACCTCAGTCTAAAGGTTGTGGGTCTGCAATCGGCATGGTATTCACAAAACTCATCCTaGGTATGCATAAGCGACGAA +
Preference number: 4 (lower is better)
Translates to: PTVKDLSLKVVGLQSAWYSQNSS*VCISDE
Trigger: TTCGTCGCTTATGCATACTCAGGATGAGTTTTGTGA...ATACCATGCCGATTGCAGACCCACAACCTTTAGACTGAGGTCTTTTACCGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR TCA 90 bp ATCCTGAGTATGCATAAGCGACGAAGGTCATCAACACCAATTCCAGCAGCAGCTAGCAAGGTGTTTCTTTaGTGCTCTGTCTTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: ILSMHKRRRSSTPIPAAASKVFL*CSVLGN
Trigger: ATTACCCAAGACAGAGCATCAAAGAAACACCTTGCT...AGCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR GCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAAGATGGAGCATTACTCTaGAGTGTTAATCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEDGALL*SVNPER
Trigger: TCTCTCAGGATTAACACTGCAGAGTAATGCTCCATC...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAATGTCCCTCAAAGTCATaGACATATTCATCCTTCACC +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEECPSKS*TYSSFT
Trigger: GGTGAAGGATGAATATGTGCATGACTTTGAGGGACA...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATCTGAGATCATACCACTaGACTCCTGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDLRSYH*TPAWAT
Trigger: TGTTGCCCAGGCAGGAGTGCAGTGGTATGATCTCAG...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAATGCACGATTACTTGGTaGATGCTGGATGGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEECTITW*MLDGLN
Trigger: ATTCAAACCATCCAGCATCCACCAAGTAATCGTGCA...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTACGATGCACGATTACTTaGTGGATGCTGGATGGTTTG +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLRCTIT*WMLDGL
Trigger: CAAACCATCCAGCATCCACCAAGTAATCGTGCATCG...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATTGGCAGGCTGACTTGTaGAAGCCACAGGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDWQADL*KPQECW
Trigger: CCAACATTCCTGTGGCTTCCACAAGTCAGCCTGCCA...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp CTGAGTATGCATAAGCGACGAAGGTCATCAACACCAATTCCAGCAGCAGCTGACATGATGGTAAGTAGCTaGCTGACCAGTAAATCCATT +
Preference number: 4 (lower is better)
Translates to: LSMHKRRRSSTPIPAAADMMVSS*LTSKSI
Trigger: AATGGATTTACTGGTCAGCCAGCTACTTACCATCAT...GTCAGCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR CCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAACAAATTAGGTGTGTATaGTGCAGTCCTACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEQIRCV*CSPTSS
Trigger: ACTGGAAGTAGGACTGCACCATACACACCTAATTTG...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp ATCCTGAGTATGCATAAGCGACGAAGGTCATCAACACCAATTCCAGCAGCAGCTCAAATTAGGTGTGTATaGTGCAGTCCTACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: ILSMHKRRRSSTPIPAAAQIRCV*CSPTSS
Trigger: ACTGGAAGTAGGACTGCACCATACACACCTAATTTG...AGCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR CCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCTTTCAAAGTAAGCAATaGAACACCAATACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPFQSKQ*NTNTQE
Trigger: CTCCTGAGTATTGGTGTTCCATTGCTTACTTTGAAA...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTCAATCCAGCTTTCAAAGTAAGCAATaGAACACCAATACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: EVLRLGAGGPGVSEFQSSFQSKQ*NTNTQE
Trigger: CTCCTGAGTATTGGTGTTCCATTGCTTACTTTGAAA...GCTGGATTGAAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR CCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATTGTACAAAGACCGCGTaGTCACTAAGGCACCTGACC +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDCTKTA*SLRHLT
Trigger: GGTCAGGTGCCTTAGTGACCACGCGGTCTTTGTACA...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTCACCACTTAGGAGGGTaGTGTCACACACACCAACTC +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSHHLGG*CHTHQL
Trigger: GAGTTGGTGTGTGTGACACCACCCTCCTAAGTGGTG...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CAA 72 bp TGTGTGTTGTTTGCTGGTGTCCTCCAGACAACGGTATaGCCTCTGGCTACTGATGCTAATTTAGTAACCCTT +
Preference number: 4 (lower is better)
Translates to: CVLFAGVLQTTV*PLATDANLVTL
Trigger: AAGGGTTACTAAATTAGCATCAGTAGCCAGAGGCAATACCGTTGTCTGGAGGACACCAGCAAACAACACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAATAGGCGGGTGGTGCTaGAGATGGCCGTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEIGGWC*RWPFWW
Trigger: CCACCAAAACGGCCATCTTCAGCACCACCCGCCTAT...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTATGGACATTGGAGAGTTaGCCCAAACAAAAGCGATCT +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLWTLES*PKQKRS
Trigger: AGATCGCTTTTGTTTGGGTCAACTCTCCAATGTCCA...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GTGAATTTCAATCCAGCAAGGTGTTTCTTTGATGCTCTGTCTTGGGTAATCCGGTGGACATTGGAGAGTTaGCCCAAACAAAAGCGATCT +
Preference number: 4 (lower is better)
Translates to: VNFNPARCFFDALSWVIRWTLES*PKQKRS
Trigger: AGATCGCTTTTGTTTGGGTCAACTCTCCAATGTCCA...CCGGATTACCCAAGACAGAGCATCAAAGAAACACCTTGCTGGATTGAAATTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR TCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTGCAATCGGCATGGTATaGAGTACTTCGTCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSAIGMV*STSSRS
Trigger: GCTCCTAGACGAAGTACTTCATACCATGCCGATTGC...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATCTAACAGAGCTGGGGTaGTGTATGTCTCTGTCGATG +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDLTELG*CMSLSM
Trigger: CATCGACAGAGACATACAGCACCCCAGCTCTGTTAG...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAATTAGGTGTGTATGGTaGAGTCCTACTTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLIRCVW*SPTSSP
Trigger: TGGACTGGAAGTAGGACTGCACCATACACACCTAAT...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAACACCTTTGCCTATGTaGAACCTTGCTCTCTCAATG +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLTPLPM*NLALSM
Trigger: CATTGAGAGAGCAAGGTTGCACATAGGCAAAGGTGT...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTCCAACTGCACACCTTTaGCTATGTGCAACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSPTAHL*LCATLL
Trigger: GAGCAAGGTTGCACATAGGCAAAGGTGTGCAGTTGG...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAGAAATCCAAAACTGCTaGAAGGTAGCCAAGGTCACT +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLEIQNC*KVAKVT
Trigger: AGTGACCTTGGCTACCTTGCAGCAGTTTTGGATTTC...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp TGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTCAATTGGTGGATGCTGGATaGTTTGAATTGAATGTCCTT +
Preference number: 4 (lower is better)
Translates to: WYEVLRLGAGGPGVSEFQLVDAG*FELNVL
Trigger: AAGGACATTCAATTCAAACCATCCAGCATCCACCAA...TTGAAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR CCA 90 bp GTGAATTTCAATCCAGCAAGGTGTTTCTTTGATGCTCTGTCTTGGGTAATCCGGCTGTCCTGTGGACATTaGAGAGTTGACCCAAACAAA +
Preference number: 4 (lower is better)
Translates to: VNFNPARCFFDALSWVIRLSCGH*RVDPNK
Trigger: TTTGTTTGGGTCAACTCTCCAATGTCCACAGGACAG...CCGGATTACCCAAGACAGAGCATCAAAGAAACACCTTGCTGGATTGAAATTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR CCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTATTTGATGCTCTGTCTTaGGTAATCCGGTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVFDALS*VIRSPA
Trigger: GGCTGGGGACCGGATTACCCAAGACAGAGCATCAAA...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCAATAAGCAAACTCAGTaGTTTCTAGGATGGTCTATT +
Preference number: 4 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPNKQTQ*FLGWSI
Trigger: AATAGACCATCCTAGAAACCACTGAGTTTGCTTATT...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATCTTTGCAACAGCAGCTaGTTTCATCCCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDLCNSS*FHPFLS
Trigger: GGAGAGGAAGGGATGAAACCAGCTGCTGTTGCAAAG...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAAGCAGAAGCTACGAGTaGCTCTTCTCTGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVSRSYE*LFSGFW
Trigger: CCAGAAGCCAGAGAAGAGCCACTCGTAGCTTCTGCT...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAAATCCTTTGGAAACAGTaGAAAACAACAGCTAACGTT +
Preference number: 4 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEILWKQ*KTTANV
Trigger: AACGTTAGCTGTTGTTTTTCACTGTTTCCAAAGGAT...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTACTGGATGGTTTGAATTaGATGTCCTTCAGTGGACAA +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLLDGLN*MSFSGQ
Trigger: TTGTCCACTGAAGGACATTCAATTCAAACCATCCAG...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTTGGCCGTTTTGGTGGTaGGGCAAATTAGGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSWPFWW*GKLGVY
Trigger: ATACACACCTAATTTGCCTCACCACCAAAACGGCCA...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAGCTCTGAGCCATGCCTaGCAAGTTCTGAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVALSHA*QVLKRK
Trigger: TTTCCTCTTCAGAACTTGTCAGGCATGGCTCAGAGC...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATCTAATCTTCAAGCTCTaGGCCATGCCTGACAAGTTC +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDLIFKL*AMPDKF
Trigger: GAACTTGTCAGGCATGGCTCAGAGCTTGAAGATTAG...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp CCAACGGTAAAAGACCTCAGTCTAAAGGTTGTGGGTCTGCAATCGGCATGGTATAGTTGCAAGACAATCTaGATTGAAACCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: PTVKDLSLKVVGLQSAWYSCKTI*IETIFT
Trigger: AGTGAAGATGGTTTCAATTCAGATTGTCTTGCAACT...ATACCATGCCGATTGCAGACCCACAACCTTTAGACTGAGGTCTTTTACCGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR TCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATTGGACAAACATGGAATaGGGTCTTACGGTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDWTNME*GLTVGV
Trigger: TACACCCACCGTAAGACCTCATTCCATGTTTGTCCA...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTATGCATTACTTTAAGCTaGGTGTACCCCACCTACAAA +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLCITLS*VYPTYK
Trigger: TTTGTAGGTGGGGTACACTCAGCTTAAAGTAATGCA...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTATCTATCTCAACTACCTaGAACTCAGCAAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLSISTT*NSARIR
Trigger: CCTGATTCTTGCTGAGTTTCAGGTAGTTGAGATAGA...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTCCCAGAGAAGATAAATaGCTTGCCCAAAGGTCACAC +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSPREDK*LAQRSH
Trigger: GTGTGACCTTTGGGCAAGTCATTTATCTTCTCTGGG...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATGAAAGCCTTAAACTCTaGCCTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDESLKL*PVCVCV
Trigger: CACACACACACACACAGGTCAGAGTTTAAGGCTTTC...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATGCTAGAAGAGAGCTCTaGATGATCCAGCCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDARREL*MIQPKV
Trigger: GACTTTTGGCTGGATCATTCAGAGCTCTCTTCTAGC...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTACTAACAGAGCTGGGGTaGTGTATGTCTCTGTCGATG +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVLTELG*CMSLSM
Trigger: CATCGACAGAGACATACAGCACCCCAGCTCTGTTAG...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTGCCTATGTGCAACCTTaGTCTCTCAATGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSAYVQP*SLNGFC
Trigger: ACAGAAGCCATTGAGAGAGCAAGGTTGCACATAGGC...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTGGCTTCTGGCATAGCTaGATTCCTCTGAATTTAGGG +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSGFWHS*IPLNLG
Trigger: CCCTAAATTCAGAGGAATGCAGCTATGCCAGAAGCC...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTATCTCCACCTTGTCTATaGCACATCAAACTATGCACA +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLSPPCL*HIKLCT
Trigger: TGTGCATAGTTTGATGTGCCATAGACAAGGTGGAGA...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATCCAAGACAGGTGGCTTaGCTCCAAAGAGATACTTCT +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDPRQVA*LQRDTS
Trigger: AGAAGTATCTCTTTGGAGCCAAGCCACCTGTCTTGG...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTCCAAGACAGGTGGCTTaGCTCCAAAGAGATACTTCT +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSPRQVA*LQRDTS
Trigger: AGAAGTATCTCTTTGGAGCCAAGCCACCTGTCTTGG...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTTACGGTGGGTGTACATaGCTCATCTCTCATTCAGCT +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSYGGCT*LISHSA
Trigger: AGCTGAATGAGAGATGAGCCATGTACACCCACCGTA...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATTACGGTGGGTGTACATaGCTCATCTCTCATTCAGCT +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDYGGCT*LISHSA
Trigger: AGCTGAATGAGAGATGAGCCATGTACACCCACCGTA...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATAATGAGGTCTTACGGTaGGTGTACATGGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDNEVLR*VYMAHL
Trigger: GAGATGAGCCATGTACACCCACCGTAAGACCTCATT...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATTTGTGTGTTGTTTGCTaGTGTCCTCCAGACAACGGT +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDLCVVC*CPPDNG
Trigger: ACCGTTGTCTGGAGGACACCAGCAAACAACACACAA...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTCCACAAAGGAACTCCTaGGACTTTCAACTGACCAGT +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSPQRNS*DFQLTS
Trigger: ACTGGTCAGTTGAAAGTCCCAGGAGTTCCTTTGTGG...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CAA 72 bp ATCCCTGAAAACACTAGCAATTACTTTAGCTACTCCTaGGGGCAGGATGTCAGACCCTCAATTCTCATAAAG +
Preference number: 4 (lower is better)
Translates to: IPENTSNYFSYS*GQDVRPSILIK
Trigger: CTTTATGAGAATTGAGGGTCTGACATCCTGCCCCAAGGAGTAGCTAAAGTAATTGCTAGTGTTTTCAGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTGAGATCAATTCCAGGTaGTACAACTCGTTCGTAGTG +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSEINSR*YNSFVV
Trigger: CACTACGAACGAGTTGTATCACCTGGAATTGATCTC...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTCTTCACCATCATACTTaGTGGAGCATTACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSLHHHT*WSITLQ
Trigger: CTGCAGAGTAATGCTCCATCAAGTATGATGGTGAAG...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAAGCTATTCCACCTACTaGTCCTGGGCCAGGGATGTT +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQESYSTY*SWARDV
Trigger: AACATCCCTGGCCCAGGATCAGTAGGTGGAATAGCT...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATCTCTCAGAAAGGGTGTaGACTAATGTGACTCTGCAT +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDLSERV*TNVTLH
Trigger: ATGCAGAGTCACATTAGTTCACACCCTTTCTGAGAG...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATATCAATCCAAGCCCGTaGGTCCTTCTATCAATGACA +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDINPSP*VLLSMT
Trigger: TGTCATTGATAGAAGGACTCACGGGCTTGGATTGAT...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATTGGCACATCAAACTATaGACAATGCTCAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDWHIKL*TMLRQA
Trigger: TGCCTGTCTGAGCATTGTGCATAGTTTGATGTGCCA...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTATTAGGTGTGTATGGTaGAGTCCTACTTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSIRCVW*SPTSSP
Trigger: TGGACTGGAAGTAGGACTGCACCATACACACCTAAT...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTCCTTTACATTCCAACTaGACACCTTTGCCTATGTGC +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSPLHSN*TPLPMC
Trigger: GCACATAGGCAAAGGTGTGCAGTTGGAATGTAAAGG...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTTTGTTGTGTGTTGTTTaGTGGTGTCCTCCAGACAAC +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSLLCVV*WCPPDN
Trigger: GTTGTCTGGAGGACACCAGCAAACAACACACAACAA...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATGAAATCCAAAACTGCTaGAAGGTAGCCAAGGTCACT +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDEIQNC*KVAKVT
Trigger: AGTGACCTTGGCTACCTTGCAGCAGTTTTGGATTTC...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAGGCTTCTGGCATAGCTaGATTCCTCTGAATTTAGGG +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVGFWHS*IPLNLG
Trigger: CCCTAAATTCAGAGGAATGCAGCTATGCCAGAAGCC...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAATGGCAGGCTGACTTGTaGAAGCCACAGGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEWQADL*KPQECW
Trigger: CCAACATTCCTGTGGCTTCCACAAGTCAGCCTGCCA...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp ATCCTGAGTATGCATAAGCGACGAAGGTCATCAACACCAATTCCAGCAGCAGCTCTTTATATATGCACTTaGGTAGATCTTATGAACAGC +
Preference number: 4 (lower is better)
Translates to: ILSMHKRRRSSTPIPAAALYICT*VDLMNS
Trigger: GCTGTTCATAAGATCTACCCAAGTGCATATATAAAG...AGCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR CCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATGGTCTGCAATCGGCATaGTATGAAGTACTTCGTCTA +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDGLQSA*YEVLRL
Trigger: TAGACGAAGTACTTCATACCATGCCGATTGCAGACC...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTAGAAACCAAGACAGGTaGCTTGGCTCCAAAGAGATA +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSRNQDR*LGSKEI
Trigger: TATCTCTTTGGAGCCAAGCCACCTGTCTTGGTTTCT...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAAATGAGGTCTTACGGTaGGTGTACATGGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVNEVLR*VYMAHL
Trigger: GAGATGAGCCATGTACACCCACCGTAAGACCTCATT...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTAGGGGAGGAAACAGTTaGGAAATACCACCACCAAAT +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSRGGNS*EIPPPN
Trigger: ATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCT...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATTTTAGTTCATTTTTGTaGAGATCAGGCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDFSSFL*RSGHLQ
Trigger: CTGGAGGTGGCCTGATCTTCACAAAAATGAACTAAA...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTCTGGATGGTTTGAATTaGATGTCCTTCAGTGGACAA +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSLDGLN*MSFSGQ
Trigger: TTGTCCACTGAAGGACATTCAATTCAAACCATCCAG...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTAGCAAGGTGTTTCTTTaGTGCTCTGTCTTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSSKVFL*CSVLGN
Trigger: ATTACCCAAGACAGAGCATCAAAGAAACACCTTGCT...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTATGCCACTTTGTGGATaGATAAGGCCATGGACTTTT +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSMPLCG*IRPWTF
Trigger: AAAAGTCCATGGCCTTATTCATCCACAAAGTGGCAT...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTACCATTACTTTCAGGTTaGACAAGAACACTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVPLLSG*TRTLAL
Trigger: CAGAGCCAGTGTTCTTGTTCAACCTGAAAGTAATGG...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAGAAGAGAGCTCTGAATaGTCCAGCCAAAAGTCACTT +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVEESSE*SSQKSL
Trigger: AAGTGACTTTTGGCTGGATCATTCAGAGCTCTCTTC...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATGATGGAGCATTACTCTaGAGTGTTAATCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDDGALL*SVNPER
Trigger: TCTCTCAGGATTAACACTGCAGAGTAATGCTCCATC...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAACACCTTTGCCTATGTaGAACCTTGCTCTCTCAATG +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVTPLPM*NLALSM
Trigger: CATTGAGAGAGCAAGGTTGCACATAGGCAAAGGTGT...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAATAGTCAAAGATACCTaGAACTCACCTTCCTACAAT +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLIVKDT*NSPSYN
Trigger: ATTGTAGGAAGGTGAGTTGCAGGTATCTTTGACTAT...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTTCTCCACCTTGTCTATaGCACATCAAACTATGCACA +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSSPPCL*HIKLCT
Trigger: TGTGCATAGTTTGATGTGCCATAGACAAGGTGGAGA...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTCAAATTAGGTGTGTATaGTGCAGTCCTACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSQIRCV*CSPTSS
Trigger: ACTGGAAGTAGGACTGCACCATACACACCTAATTTG...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTACTGTCCTGTGGACATTaGAGAGTTGACCCAAACAAA +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVLSCGH*RVDPNK
Trigger: TTTGTTTGGGTCAACTCTCCAATGTCCACAGGACAG...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp TTCCTTACTAGAATAAAGCCAAGCACTTCAGTGATTACAACCCACCCTGGCTGGCTTTATATATGCACTTaGGTAGATCTTATGAACAGC +
Preference number: 4 (lower is better)
Translates to: FLTRIKPSTSVITTHPGWLYICT*VDLMNS
Trigger: GCTGTTCATAAGATCTACCCAAGTGCATATATAAAG...CCAGCCAGGGTGGGTTGTAATCACTGAAGTGCTTGGCTTTATTCTAGTAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593223.1
CDS-3UTR TCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTATTTAGTTCATTTTTGTaGAGATCAGGCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVFSSFL*RSGHLQ
Trigger: CTGGAGGTGGCCTGATCTTCACAAAAATGAACTAAA...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAATGGCCGTTTTGGTGGTaGGGCAAATTAGGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEWPFWW*GKLGVY
Trigger: ATACACACCTAATTTGCCTCACCACCAAAACGGCCA...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAAGCAAGGTGTTTCTTTaGTGCTCTGTCTTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVSKVFL*CSVLGN
Trigger: ATTACCCAAGACAGAGCATCAAAGAAACACCTTGCT...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTTGTGTTCATTCCAGGTaGTATAAGGAGGACTATCAT +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSCVHSR*YKEDYH
Trigger: ATGATAGTCCTCCTTATATCACCTGGAATGAACACA...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAGCAGCACAGCTAATATaGGTTCAGTTTACTCACATG +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVAAQLI*VQFTHM
Trigger: CATGTGAGTAAACTGAACTCATATTAGCTGTGCTGC...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATCAAATGCCAATACAATaGGGTCTTTTTCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDQMPIQ*GLFQHF
Trigger: GAAGTGCTGAAAAAGACCTCATTGTATTGGCATTTG...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATAATAGAACTGGCTGTTaGCTGTCATTTAGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDNRTGC*LSFSRR
Trigger: CCTTCTACTAAATGACAGGCAACAGCCAGTTCTATT...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAATTGAATGTCCTTCAGTaGACAACGATGGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQELNVLQ*TTMAVP
Trigger: AGGGACAGCCATCGTTGTCCACTGAAGGACATTCAA...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTACTTTATATATGCACTTaGGTAGATCTTATGAACAGC +
Preference number: 4 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLLYICT*VDLMNS
Trigger: GCTGTTCATAAGATCTACCCAAGTGCATATATAAAG...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTACTATCTGCAACAAGATaGATTCTGCCTTTACGGGAA +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVLSATR*ILPLRE
Trigger: TTCCCGTAAAGGCAGAATCCATCTTGTTGCAGATAG...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CAA 72 bp CTTCACAGGAAAGTGTCTTGGGTCCTGTCCCAGAGTTaGTACTTGTGTTTTAAAGAACGTTCTAGTAAGTTT +
Preference number: 4 (lower is better)
Translates to: LHRKVSWVLSQS*YLCFKERSSKF
Trigger: AAACTTACTAGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTTCCTGTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAGGATGCTGGATGGTTTaGATTGAATGTCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEGCWMV*IECPSV
Trigger: CACTGAAGGACATTCAATTCAAACCATCCAGCATCC...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATAGTTGCAAGACAATCTaGATTGAAACCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDSCKTI*IETIFT
Trigger: AGTGAAGATGGTTTCAATTCAGATTGTCTTGCAACT...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAAAGGTACCTCATCACTaGGATTGGACTCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEKVPHH*DWTQKC
Trigger: GCACTTTTGAGTCCAATCTCAGTGATGAGGTACCTT...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAATGGCACATCAAACTATaGACAATGCTCAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEWHIKL*TMLRQA
Trigger: TGCCTGTCTGAGCATTGTGCATAGTTTGATGTGCCA...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAGTATGTCTCTGTCGATaGACGATTACTTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEVCLCR*TITWWM
Trigger: CATCCACCAAGTAATCGTGCATCGACAGAGACATAC...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAACCTTTACATTCCAACTaGACACCTTTGCCTATGTGC +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEPLHSN*TPLPMC
Trigger: GCACATAGGCAAAGGTGTGCAGTTGGAATGTAAAGG...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAGAAGAAATCCAAAACTaGTGCAAGGTAGCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEEEIQN*CKVAKV
Trigger: GACCTTGGCTACCTTGCAGCAGTTTTGGATTTCTTC...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTATTGGTGGATGCTGGATaGTTTGAATTGAATGTCCTT +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVLVDAG*FELNVL
Trigger: AAGGACATTCAATTCAAACCATCCAGCATCCACCAA...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAATGATGGTAAGTAGCTaGCTGACCAGTAAATCCATT +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVMMVSS*LTSKSI
Trigger: AATGGATTTACTGGTCAGCCAGCTACTTACCATCAT...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATCAATTCTGGATGATGTaGAAAATTTCACTCCACAGT +
Preference number: 4 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDQFWMM*KISLHS
Trigger: ACTGTGGAGTGAAATTTTCCACATCATCCAGAATTG...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAAGTTGCAAGACAATCTaGATTGAAACCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVSCKTI*IETIFT
Trigger: AGTGAAGATGGTTTCAATTCAGATTGTCTTGCAACT...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAATCAACAGAGAGAAATaGTTGTCTTCACCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVINREK*LSSPKV
Trigger: AACCTTTGGTGAAGACAATCATTTCTCTCTGTTGAT...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTTTCAATTGCTCTTTTTaGAAATGTTTCACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSFNCSF*KCFTLS
Trigger: GGAGAGAGTGAAACATTTGCAAAAAGAGCAATTGAA...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR GCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAATGTCCCTCAAAGTCATaGACATATTCATCCTTCACC +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQECPSKS*TYSSFT
Trigger: GGTGAAGGATGAATATGTGCATGACTTTGAGGGACA...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTGGCATCATTACTTGTTaGTGTATTCGTAATAGACAT +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSGIITC*CIRNRH
Trigger: ATGTCTATTACGAATACACCAACAAGTAATGATGCC...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTATTTCAAAGTAAGCAATaGAACACCAATACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVFQSKQ*NTNTQE
Trigger: CTCCTGAGTATTGGTGTTCCATTGCTTACTTTGAAA...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTAATAAGCAAACTCAGTaGTTTCTAGGATGGTCTATT +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSNKQTQ*FLGWSI
Trigger: AATAGACCATCCTAGAAACCACTGAGTTTGCTTATT...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTAAACAGCCATGTTTCTaGAAAAAGCAAGGTTATATG +
Preference number: 4 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSKQPCF*KKQGYM
Trigger: CATATAACCTTGCTTTTTCCAGAAACATGGCTGTTT...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAGTGGTGCTAGGCCTTTaGTTAAAATTAAGTCTTAAG +
Preference number: 4 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVVVLGL*LKLSLK
Trigger: CTTAAGACTTAATTTTAACCAAAGGCCTAGCACCAC...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAATGATGGTAAGTAGCTaGCTGACCAGTAAATCCATT +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEMMVSS*LTSKSI
Trigger: AATGGATTTACTGGTCAGCCAGCTACTTACCATCAT...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR TCA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAATCAACAGAGAGAAATaGTTGTCTTCACCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEINREK*LSSPKV
Trigger: AACCTTTGGTGAAGACAATCATTTCTCTCTGTTGAT...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CAA 72 bp GCAAGGTTATATGGCAGTGATTTATTGTCATTATCTTaGTATACCAGGGGCGGTAAACTATTAAAAATGAGA +
Preference number: 4 (lower is better)
Translates to: ARLYGSDLLSLS*YTRGGKLLKMR
Trigger: TCTCATTTTTAATAGTTTACCGCCCCTGGTATACAAAGATAATGACAATAAATCACTGCCATATAACCTTGC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
3UTR CAA 72 bp ATTCACACTTTTCCCTTAAATCACATGTCCAATGCATaGAACAGAACTCAATACTTGAAGAAAGTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: IHTFPLNHMSNA*NRTQYLKKVCQ
Trigger: TTGGCAAACTTTCTTCAAGTATTGAGTTCTGTTCAATGCATTGGACATGTGATTTAAGGGAAAAGTGTGAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS TCA 90 bp GACGACCAGGGCCGTGTTGTTGCTGCCAACTTGTCGAGAAGCCACTaGGCATGCGCGCGCGGGGACCACATCCGGGTAATTTCAGGGTTT +
Preference number: 5 (lower is better)
Translates to: DDQGRVVAANLSRSH*ACARGDHIRVISGF
Trigger: AAACCCTGAAATTACCCGGATGTGGTCCCCGCGCGCGCATGCTCAGTGGCTTCTCGACAAGTTGGCAGCAACAACACGGCCCTGGTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589076.5
CDS-3UTR CAA 90 bp GCTGACAGACTGATAGCTGGAGCTATTCCACCTACTGATCCTGGGCCAGGGATGGGCAGCTGCTGCAGCTaGTGCAGTAGCCGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: ADRLIAGAIPPTDPGPGMGSCCS*CSSRLL
Trigger: CAGCAGGCGGCTACTGCACAAGCTGCAGCAGCTGCC...CATCCCTGGCCCAGGATCAGTAGGTGGAATAGCTCCAGCTATCAGTCTGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS GCA 90 bp CTGGCTGAGGCCCTGATGCTATCTGCAACAGTCCTTCACTATGGCTaGCCCCCAGTATACTGGCAGGCTGACTTGTGGAAGCCACAGGAA +
Preference number: 5 (lower is better)
Translates to: LAEALMLSATVLHYG*PPVYWQADLWKPQE
Trigger: TTCCTGTGGCTTCCACAAGTCAGCCTGCCAGTATACTGGGGGGCAGCCATAGTGAAGGACTGTTGCAGATAGCATCAGGGCCTCAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000591126.5
ENST00000592186.5
CDS-3UTR CAA 90 bp CTGAGTATGCATAAGCGACGAAGGTCATCAACACCAATTCCAGCAGCAGCTGACGGCAGCTGCTGCAGCTaGTGCAGTAGCCGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LSMHKRRRSSTPIPAAADGSCCS*CSSRLL
Trigger: CAGCAGGCGGCTACTGCACAAGCTGCAGCAGCTGCC...GTCAGCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS TCA 90 bp GCACACAGTTCAATTTTACCTGATAGCTGGAGCTATTCCACCTACTaGTCCTGGGCCAGGGATGTTTCCTGCCACGGCTGCTGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: AHSSILPDSWSYSTY*SWARDVSCHGCCLG
Trigger: GCCCAGGCAGCAGCCGTGGCAGGAAACATCCCTGGCCCAGGATCAGTAGGTGGAATAGCTCCAGCTATCAGGTAAAATTGAACTGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590499.1
CDS-3UTR CAA 90 bp GTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCCTGAAGATGGCCGTTTaGGTGGTGAGGCAAATTAGG +
Preference number: 5 (lower is better)
Translates to: VGLQSAWYEVLRLGAGGPLKMAV*VVRQIR
Trigger: CCTAATTTGCCTCACCACCAAAACGGCCATCTTCAG...GGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592186.5
ENST00000611848.1
CDS-3UTR CAA 90 bp GTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCTGCCTATGTGCAACCTaGCTCTCTCAATGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: VGLQSAWYEVLRLGAGGPCLCAT*LSQWLL
Trigger: CAGAAGCCATTGAGAGAGCAAGGTTGCACATAGGCA...GGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR CAA 90 bp TTCCTTACTAGAATAAAGCCAAGCACTTCAGTGATTACAACCCACCCTGGCTGGGGCAGCTGCTGCAGCTaGTGCAGTAGCCGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: FLTRIKPSTSVITTHPGWGSCCS*CSSRLL
Trigger: CAGCAGGCGGCTACTGCACAAGCTGCAGCAGCTGCC...CCAGCCAGGGTGGGTTGTAATCACTGAAGTGCTTGGCTTTATTCTAGTAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593223.1
CDS TCA 90 bp AGAATGAAAAGCATACTTACTGATAGCTGGAGCTATTCCACCTACTaGTCCTGGGCCAGGGATGTTTCCTGCCACGGCTGCTGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: RMKSILTDSWSYSTY*SWARDVSCHGCCLG
Trigger: GCCCAGGCAGCAGCCGTGGCAGGAAACATCCCTGGCCCAGGATCAGTAGGTGGAATAGCTCCAGCTATCAGTAAGTATGCTTTTCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593223.1
CDS GCA 90 bp ACACCAATACTCAGGAGCAGGATGATTGGAAATGGGAGGCTGGAATaGAAGCTCATTGTGAACAGGCCAGTAATGTCCGGGATGGGGCGG +
Preference number: 5 (lower is better)
Translates to: TPILRSRMIGNGRLE*KLIVNRPVMSGMGR
Trigger: CCGCCCCATCCCGGACATTACTGGCCTGTTCACAATGAGCTTGCATTCCAGCCTCCCATTTCCAATCATCCTGCTCCTGAGTATTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000591126.5
ENST00000611848.1
CDS-3UTR CAA 90 bp GCTGACAGACTGATAGCTGGAGCTATTCCACCTACTGATCCTGGGCCAGGGATGCTGAAGATGGCCGTTTaGGTGGTGAGGCAAATTAGG +
Preference number: 5 (lower is better)
Translates to: ADRLIAGAIPPTDPGPGMLKMAV*VVRQIR
Trigger: CCTAATTTGCCTCACCACCAAAACGGCCATCTTCAG...CATCCCTGGCCCAGGATCAGTAGGTGGAATAGCTCCAGCTATCAGTCTGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR CAA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTGCCTATGTGCAACCTaGCTCTCTCAATGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDCLCAT*LSQWLL
Trigger: CAGAAGCCATTGAGAGAGCAAGGTTGCACATAGGCA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAGGCAGCTGCTGCAGCTaGTGCAGTAGCCGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLGSCCS*CSSRLL
Trigger: CAGCAGGCGGCTACTGCACAAGCTGCAGCAGCTGCC...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp TGCAGCTTGTGCAGTAGCCGCCTGCTGCTGCATCTGTCGATGACACTGACGCAATTCACTCTCTCCACCTaGTCTATGGCACATCAAACT +
Preference number: 5 (lower is better)
Translates to: CSLCSSRLLLHLSMTLTQFTLST*SMAHQT
Trigger: AGTTTGATGTGCCATAGACAAGGTGGAGAGAGTGAA...TTGCGTCAGTGTCATCGACAGATGCAGCAGCAGGCGGCTACTGCACAAGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR CAA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATGTGGACATTGGAGAGTaGACCCAAACAAAAGCGATC +
Preference number: 5 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDVDIGE*TQTKAI
Trigger: GATCGCTTTTGTTTGGGTCAACTCTCCAATGTCCAC...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCTACTTTAGCTACTCCTaGGGGCAGGATGTCAGACCC +
Preference number: 5 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPYFSYS*GQDVRP
Trigger: GGGTCTGACATCCTGCCCCAAGGAGTAGCTAAAGTA...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GCTGACAGACTGATAGCTGGAGCTATTCCACCTACTGATCCTGGGCCAGGGATGCCTTCACCATCATACTaGATGGAGCATTACTCTGCA +
Preference number: 5 (lower is better)
Translates to: ADRLIAGAIPPTDPGPGMPSPSY*MEHYSA
Trigger: TGCAGAGTAATGCTCCATCAAGTATGATGGTGAAGG...CATCCCTGGCCCAGGATCAGTAGGTGGAATAGCTCCAGCTATCAGTCTGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR CAA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCTCCAACTGCACACCTTaGCCTATGTGCAACCTTGCT +
Preference number: 5 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPSNCTP*PMCNLA
Trigger: AGCAAGGTTGCACATAGGCAAAGGTGTGCAGTTGGA...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS TCA 90 bp AACCTTGCTCTCTCAATGGCTTCTGTCCTGTGGACATTGGAGAGTTaGCCCAAACAAAAGCGATCTCCTCCAGAAGGGTCCACGTATCCA +
Preference number: 5 (lower is better)
Translates to: NLALSMASVLWTLES*PKQKRSPPEGSTYP
Trigger: TGGATACGTGGACCCTTCTGGAGGAGATCGCTTTTGTTTGGGTCAACTCTCCAATGTCCACAGGACAGAAGCCATTGAGAGAGCAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000588745.5
ENST00000591126.5
ENST00000611848.1
CDS TCA 90 bp CTGAGTCAGGATTCCAGGCATGGCTTAGCTGGGTCCTCTACAAAGTaGGGCTGGAACAAAGGATCTGCTTCCAAGTTCATGTGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LSQDSRHGLAGSSTK*GWNKGSASKFMWLL
Trigger: CAACAACCACATGAACTTGGAAGCAGATCCTTTGTTCCAGCCTCACTTTGTAGAGGACCCAGCTAAGCCATGCCTGGAATCCTGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588860.5
CDS CCA 90 bp GTGCTGAAGATGGCCGTTTTGGTGGTGAGGCAAATTAGGTGTGTATaGTGCAGTCCTACTTCCAGTCCAGGTGGTAGTGCTGTTATGATG +
Preference number: 5 (lower is better)
Translates to: VLKMAVLVVRQIRCV*CSPTSSPGGSAVMM
Trigger: CATCATAACAGCACTACCACCTGGACTGGAAGTAGGACTGCACCATACACACCTAATTTGCCTCACCACCAAAACGGCCATCTTCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000591126.5
ENST00000592186.5
CDS CCA 90 bp CTATGTGCAACCTTGCTCTCTCAATGGCTTCTGTCCTGTGGACATTaGAGAGTTGACCCAAACAAAAGCGATCTCCTCCAGAAGGGTCCA +
Preference number: 5 (lower is better)
Translates to: LCATLLSQWLLSCGH*RVDPNKSDLLQKGP
Trigger: TGGACCCTTCTGGAGGAGATCGCTTTTGTTTGGGTCAACTCTCCAATGTCCACAGGACAGAAGCCATTGAGAGAGCAAGGTTGCACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000588745.5
ENST00000591126.5
ENST00000611848.1
CDS-3UTR CAA 90 bp CTAAAGGTTGTGGGTCTGCAATCGGCATGGTATGAAGTACTTCGTCTAGGAGCTTACTGGCAGGCTGACTaGTGGAAGCCACAGGAATGT +
Preference number: 5 (lower is better)
Translates to: LKVVGLQSAWYEVLRLGAYWQAD*WKPQEC
Trigger: ACATTCCTGTGGCTTCCACAAGTCAGCCTGCCAGTA...AGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCACAACCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR CAA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCTTGCTTTGTTGTGTGTaGTTTGCTGGTGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPLLCCV*FAGVLQ
Trigger: CTGGAGGACACCAGCAAACAACACACAACAAAGCAA...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCAATGACAAGCAGCCTTaGCAACAGCAGCTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPNDKQP*QQQLVS
Trigger: TGAAACCAGCTGCTGTTGCAAAGGCTGCTTGTCATT...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCCTTTCAACTGACCAGTaGTCCCCAAAGCAGAAGCTA +
Preference number: 5 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPLSTDQ*SPKQKL
Trigger: TAGCTTCTGCTTTGGGGACAACTGGTCAGTTGAAAG...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS GCA 90 bp CTGAAGATGGCCGTTTTGGTGGTGAGGCAAATTAGGTGTGTATGGTaGAGTCCTACTTCCAGTCCAGGTGGTAGTGCTGTTATGATGGTA +
Preference number: 5 (lower is better)
Translates to: LKMAVLVVRQIRCVW*SPTSSPGGSAVMMV
Trigger: TACCATCATAACAGCACTACCACCTGGACTGGAAGTAGGACTGCACCATACACACCTAATTTGCCTCACCACCAAAACGGCCATCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000591126.5
ENST00000592186.5
CDS CCA 90 bp CAGGATAACAGATTCTCTGAGTCAGGATTCCAGGCATGGCTTAGCTaGGTCCTCTACAAAGTGAGGCTGGAACAAAGGATCTGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: QDNRFSESGFQAWLS*VLYKVRLEQRICFQ
Trigger: TTGGAAGCAGATCCTTTGTTCCAGCCTCACTTTGTAGAGGACCCAGCTAAGCCATGCCTGGAATCCTGACTCAGAGAATCTGTTATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588860.5
CDS-3UTR CAA 90 bp GCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAATTTTCGATGCACGATTACTaGGTGGATGCTGGATGGTTT +
Preference number: 5 (lower is better)
Translates to: AWYEVLRLGAGGPGVSEFSMHDY*VDAGWF
Trigger: AAACCATCCAGCATCCACCAAGTAATCGTGCATCGA...AAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR CAA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAACTGAAGATGGCCGTTTaGGTGGTGAGGCAAATTAGG +
Preference number: 5 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEELKMAV*VVRQIR
Trigger: CCTAATTTGCCTCACCACCAAAACGGCCATCTTCAG...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATAACGTTCTAGTAAGTTaGGTTATCTGGTTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDNVLVS*VIWFPC
Trigger: GCAAGGAAACCAGATAACCAAACTTACTAGAACGTT...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATAAGGTTTGTTTTGCTTaGTTGTGTGTTGTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDKVCFA*LCVVCW
Trigger: CCAGCAAACAACACACAACAAAGCAAAACAAACCTT...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCGCCATTACTTTCAGGTaGAACAAGAACACTGGCTCT +
Preference number: 5 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPAITFR*NKNTGS
Trigger: AGAGCCAGTGTTCTTGTTCAACCTGAAAGTAATGGC...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS TCA 90 bp CTCTGTCGATGCACGATTACTTGGTGGATGCTGGATGGTTTGAATTaGATGTCCTTCAGTGGACAACGATGGCTGTCCCTCAAAGTCATG +
Preference number: 5 (lower is better)
Translates to: LCRCTITWWMLDGLN*MSFSGQRWLSLKVM
Trigger: CATGACTTTGAGGGACAGCCATCGTTGTCCACTGAAGGACATTCAATTCAAACCATCCAGCATCCACCAAGTAATCGTGCATCGACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000585448.1
ENST00000588745.5
ENST00000591126.5
ENST00000592186.5
ENST00000592911.5
CDS CCA 90 bp TGCTGTATGTCTCTGTCGATGCACGATTACTTGGTGGATGCTGGATaGTTTGAATTGAATGTCCTTCAGTGGACAACGATGGCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: CCMSLSMHDYLVDAG*FELNVLQWTTMAVP
Trigger: AGGGACAGCCATCGTTGTCCACTGAAGGACATTCAATTCAAACCATCCAGCATCCACCAAGTAATCGTGCATCGACAGAGACATACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000585448.1
ENST00000588745.5
ENST00000591126.5
ENST00000592186.5
ENST00000592911.5
CDS-3UTR CAA 90 bp CTGAGTATGCATAAGCGACGAAGGTCATCAACACCAATTCCAGCAGCAGCTGACGCTGGATGGTTTGAATaGAATGTCCTTCAGTGGACA +
Preference number: 5 (lower is better)
Translates to: LSMHKRRRSSTPIPAAADAGWFE*NVLQWT
Trigger: TGTCCACTGAAGGACATTCAATTCAAACCATCCAGC...GTCAGCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592186.5
CDS-3UTR CAA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAATCGATGCACGATTACTaGGTGGATGCTGGATGGTTT +
Preference number: 5 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEESMHDY*VDAGWF
Trigger: AAACCATCCAGCATCCACCAAGTAATCGTGCATCGA...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAGGCAGCTGCTGCAGCTaGTGCAGTAGCCGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEGSCCS*CSSRLL
Trigger: CAGCAGGCGGCTACTGCACAAGCTGCAGCAGCTGCC...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GCACTGGGACAACTGCTAGGGATAAGGCTGGGCCTAGGATGCCACTTTGTGGATTTAGTTTCCCAAGGTTaGTTTTGCTTTGTTGTGTGT +
Preference number: 5 (lower is better)
Translates to: ALGQLLGIRLGLGCHFVDLVSQG*FCFVVC
Trigger: ACACACAACAAAGCAAAACAAACCTTGGGAAACTAA...ATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTATACTTTAGCTACTCCTaGGGGCAGGATGTCAGACCC +
Preference number: 5 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLYFSYS*GQDVRP
Trigger: GGGTCTGACATCCTGCCCCAAGGAGTAGCTAAAGTA...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTACGCGTTAAGTGTTTATaGCAGCCCCTAAGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLRVKCL*QPLRWC
Trigger: GCACCACCTTAGGGGCTGCAATAAACACTTAACGCG...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS TCA 90 bp TATGTCTCTGTCGATGCACGATTACTTGGTGGATGCTGGATGGTTTaGATTGAATGTCCTTCAGTGGACAACGATGGCTGTCCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: YVSVDARLLGGCWMV*IECPSVDNDGCPSK
Trigger: CTTTGAGGGACAGCCATCGTTGTCCACTGAAGGACATTCAATTCAAACCATCCAGCATCCACCAAGTAATCGTGCATCGACAGAGACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000585448.1
ENST00000588745.5
ENST00000591126.5
ENST00000592186.5
ENST00000592911.5
CDS CCA 90 bp ACATGTATTCAGGATAACAGATTCTCTGAGTCAGGATTCCAGGCATaGCTTAGCTGGGTCCTCTACAAAGTGAGGCTGGAACAAAGGATC +
Preference number: 5 (lower is better)
Translates to: TCIQDNRFSESGFQA*LSWVLYKVRLEQRI
Trigger: GATCCTTTGTTCCAGCCTCACTTTGTAGAGGACCCAGCTAAGCCATGCCTGGAATCCTGACTCAGAGAATCTGTTATCCTGAATACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588860.5
CDS-3UTR CAA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTACCAGGGCCGTGTTGTaGCTGCCAACTTGTCGAGAA +
Preference number: 5 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSTRAVL*LPTCRE
Trigger: TTCTCGACAAGTTGGCAGCAACAACACGGCCCTGGT...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342988.8
CDS-3UTR CAA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAACGACCAGGGCCGTGTaGTTGCTGCCAACTTGTCGA +
Preference number: 5 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVTTRAV*LLPTCR
Trigger: TCGACAAGTTGGCAGCAACAACACGGCCCTGGTCGT...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342988.8
CDS-3UTR CAA 90 bp CCTTTCACAAAACTCATCCTGAGTATGCATAAGCGACGAAGGTCATCAACACCATCCAACTGCACACCTTaGCCTATGTGCAACCTTGCT +
Preference number: 5 (lower is better)
Translates to: PFTKLILSMHKRRRSSTPSNCTP*PMCNLA
Trigger: AGCAAGGTTGCACATAGGCAAAGGTGTGCAGTTGGA...TGGTGTTGATGACCTTCGTCGCTTATGCATACTCAGGATGAGTTTTGTGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR CAA 90 bp TCGGCATGGTATGAAGTACTTCGTCTAGGAGCTGGAGGGCCCGGTGTAAGTGAACCTTTATATATGCACTaGGGTAGATCTTATGAACAG +
Preference number: 5 (lower is better)
Translates to: SAWYEVLRLGAGGPGVSEPLYMH*GRSYEQ
Trigger: CTGTTCATAAGATCTACCCAAGTGCATATATAAAGG...TTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAACCAAGACAGGTGGCTaGGCTCCAAAGAGATACTTC +
Preference number: 5 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLTKTGG*APKRYF
Trigger: GAAGTATCTCTTTGGAGCCAAGCCACCTGTCTTGGT...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCGTCCTGTCCCAGAGTTaGTACTTGTGTTTTAAAGAA +
Preference number: 5 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPVLSQS*YLCFKE
Trigger: TTCTTTAAAACACAAGTACAAACTCTGGGACAGGAC...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAATTTGTTGTGTGTTGTTaGCTGGTGTCCTCCAGACAA +
Preference number: 5 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEFVVCC*LVSSRQ
Trigger: TTGTCTGGAGGACACCAGCAAACAACACACAACAAA...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCAAGGTTTGTTTTGCTTaGTTGTGTGTTGTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPKVCFA*LCVVCW
Trigger: CCAGCAAACAACACACAACAAAGCAAAACAAACCTT...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCACGTTGCAAGGAAAATaGTTAGACATGTATTCAGGA +
Preference number: 5 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPTLQGK*LDMYSG
Trigger: TCCTGAATACATGTCTAACAATTTTCCTTGCAACGT...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCAAACAACAGCTAACGTaGCAAGGAAAATTGTTAGAC +
Preference number: 5 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPKQQLT*QGKLLD
Trigger: GTCTAACAATTTTCCTTGCAACGTTAGCTGTTGTTT...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp CCTTTCACAAAACTCATCCTGAGTATGCATAAGCGACGAAGGTCATCAACACCAGTGGACATTGGAGAGTaGACCCAAACAAAAGCGATC +
Preference number: 5 (lower is better)
Translates to: PFTKLILSMHKRRRSSTPVDIGE*TQTKAI
Trigger: GATCGCTTTTGTTTGGGTCAACTCTCCAATGTCCAC...TGGTGTTGATGACCTTCGTCGCTTATGCATACTCAGGATGAGTTTTGTGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS-3UTR CAA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTCTCCAGACAACGGTATaGCCTCTGGCTACTGATGCT +
Preference number: 5 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSLQTTV*PLATDA
Trigger: AGCATCAGTAGCCAGAGGCAATACCGTTGTCTGGAG...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCTTCCCAAGGTTTGTTTaGCTTTGTTGTGTGTTGTTT +
Preference number: 5 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPFPRFV*LCCVLF
Trigger: AAACAACACACAACAAAGCAAAACAAACCTTGGGAA...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp TTTAGGGGAGGAAACAGTTGGGAAATACCACCACCAAATCTGTCCCCAACCCCCCTGGCTCTGGACCTATaGAGAAAGCATTTAAATAAA +
Preference number: 5 (lower is better)
Translates to: FRGGNSWEIPPPNLSPTPLALDL*RKHLNK
Trigger: TTTATTTAAATGCTTTCTCAATAGGTCCAGAGCCAG...GGGGGTTGGGGACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATCGCGTTAAGTGTTTATaGCAGCCCCTAAGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDRVKCL*QPLRWC
Trigger: GCACCACCTTAGGGGCTGCAATAAACACTTAACGCG...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp CCAACGGTAAAAGACCTCAGTCTAAAGGTTGTGGGTCTGCAATCGGCATGGTATAGTCAGGAGTTTAACTaGATAGCTGGAGCTATTCCA +
Preference number: 5 (lower is better)
Translates to: PTVKDLSLKVVGLQSAWYSQEFN*IAGAIP
Trigger: TGGAATAGCTCCAGCTATCAAGTTAAACTCCTGACT...ATACCATGCCGATTGCAGACCCACAACCTTTAGACTGAGGTCTTTTACCGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS GCA 90 bp ATTGAATGTCCTTCAGTGGACAACGATGGCTGTCCCTCAAAGTCATaGACATATTCATCCTTCACCATCATACTTGATGGAGCTGCTCTT +
Preference number: 5 (lower is better)
Translates to: IECPSVDNDGCPSKS*TYSSFTIILDGAAL
Trigger: AAGAGCAGCTCCATCAAGTATGATGGTGAAGGATGAATATGTGCATGACTTTGAGGGACAGCCATCGTTGTCCACTGAAGGACATTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585448.1
CDS CCA 90 bp GATTACTTGGTGGATGCTGGATGGTTTGAATTGAATGTCCTTCAGTaGACAACGATGGCTGTCCCTCAAAGTCATGCACATATTCATCCT +
Preference number: 5 (lower is better)
Translates to: DYLVDAGWFELNVLQ*TTMAVPQSHAHIHP
Trigger: AGGATGAATATGTGCATGACTTTGAGGGACAGCCATCGTTGTCCACTGAAGGACATTCAATTCAAACCATCCAGCATCCACCAAGTAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000585448.1
ENST00000588745.5
ENST00000591126.5
ENST00000592186.5
ENST00000592911.5
CDS-3UTR CAA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTATACTGGCAGGCTGACTaGTGGAAGCCACAGGAATGT +
Preference number: 5 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVYWQAD*WKPQEC
Trigger: ACATTCCTGTGGCTTCCACAAGTCAGCCTGCCAGTA...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTTCCAACTGCACACCTTaGCCTATGTGCAACCTTGCT +
Preference number: 5 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSSNCTP*PMCNLA
Trigger: AGCAAGGTTGCACATAGGCAAAGGTGTGCAGTTGGA...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTATTTGTTGTGTGTTGTTaGCTGGTGTCCTCCAGACAA +
Preference number: 5 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLFVVCC*LVSSRQ
Trigger: TTGTCTGGAGGACACCAGCAAACAACACACAACAAA...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS GCA 90 bp ATTGAATGTCCTTCAGTGGACAACGATGGCTGTCCCTCAAAGTCATaGACATATTCATCCTTCACCATCATACTTGATGGAGCATTACTC +
Preference number: 5 (lower is better)
Translates to: IECPSVDNDGCPSKS*TYSSFTIILDGALL
Trigger: GAGTAATGCTCCATCAAGTATGATGGTGAAGGATGAATATGTGCATGACTTTGAGGGACAGCCATCGTTGTCCACTGAAGGACATTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000588745.5
ENST00000592186.5
ENST00000592911.5
CDS-3UTR CAA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTTCGATGCACGATTACTaGGTGGATGCTGGATGGTTT +
Preference number: 5 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSSMHDY*VDAGWF
Trigger: AAACCATCCAGCATCCACCAAGTAATCGTGCATCGA...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTGTGGACATTGGAGAGTaGACCCAAACAAAAGCGATC +
Preference number: 5 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSVDIGE*TQTKAI
Trigger: GATCGCTTTTGTTTGGGTCAACTCTCCAATGTCCAC...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTATGCCTATGTGCAACCTaGCTCTCTCAATGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVCLCAT*LSQWLL
Trigger: CAGAAGCCATTGAGAGAGCAAGGTTGCACATAGGCA...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTAAAAATGCCAGTAAAGTaGGCAATAACGAAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLKMPVK*AITKGA
Trigger: TGCTCCCTTCGTTATTGCCAACTTTACTGGCATTTT...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp CTCTCCTTAAGCCAGACCATGCAACCTGTAAATCTGCACTGTTCACAGGAGGAAATACTTGAAGAAAGTTaGCCAACTCCATGTTTAGTC +
Preference number: 5 (lower is better)
Translates to: LSLSQTMQPVNLHCSQEEILEES*PTPCLV
Trigger: GACTAAACATGGAGTTGGCAAACTTTCTTCAAGTAT...TTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTAAGGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTCTTTCAACTGACCAGTaGTCCCCAAAGCAGAAGCTA +
Preference number: 5 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSLSTDQ*SPKQKL
Trigger: TAGCTTCTGCTTTGGGGACAACTGGTCAGTTGAAAG...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS GCA 90 bp GCAAATGTTTCACTCTCTCCACCTTGTCTATGGCACATCAAACTATaGACAATGCTCAGACAGGCATCATTACTTGTTGGTGTATTCGTA +
Preference number: 5 (lower is better)
Translates to: ANVSLSPPCLWHIKL*TMLRQASLLVGVFV
Trigger: TACGAATACACCAACAAGTAATGATGCCTGTCTGAGCATTGTGCATAGTTTGATGTGCCATAGACAAGGTGGAGAGAGTGAAACATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000588745.5
ENST00000588860.5
ENST00000589076.5
ENST00000589941.1
ENST00000590061.1
ENST00000592186.5
CDS-3UTR CAA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTTTCACTCTCTCCACCTaGTCTATGGCACATCAAACT +
Preference number: 5 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSFTLST*SMAHQT
Trigger: AGTTTGATGTGCCATAGACAAGGTGGAGAGAGTGAA...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATCCTTCACCATCATACTaGATGGAGCATTACTCTGCA +
Preference number: 5 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDPSPSY*MEHYSA
Trigger: TGCAGAGTAATGCTCCATCAAGTATGATGGTGAAGG...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTGCTGGATGGTTTGAATaGAATGTCCTTCAGTGGACA +
Preference number: 5 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSAGWFE*NVLQWT
Trigger: TGTCCACTGAAGGACATTCAATTCAAACCATCCAGC...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAATACTGGCAGGCTGACTaGTGGAAGCCACAGGAATGT +
Preference number: 5 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEYWQAD*WKPQEC
Trigger: ACATTCCTGTGGCTTCCACAAGTCAGCCTGCCAGTA...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp TTCCTTACTAGAATAAAGCCAAGCACTTCAGTGATTACAACCCACCCTGGCTGGCCTTTATATATGCACTaGGGTAGATCTTATGAACAG +
Preference number: 5 (lower is better)
Translates to: FLTRIKPSTSVITTHPGWPLYMH*GRSYEQ
Trigger: CTGTTCATAAGATCTACCCAAGTGCATATATAAAGG...CCAGCCAGGGTGGGTTGTAATCACTGAAGTGCTTGGCTTTATTCTAGTAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593223.1
CDS-3UTR CAA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAAATGACAAGCAGCCTTaGCAACAGCAGCTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVNDKQP*QQQLVS
Trigger: TGAAACCAGCTGCTGTTGCAAAGGCTGCTTGTCATT...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTACACATGTCCAATGCATaGAACAGAACTCAATACTTG +
Preference number: 5 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLHMSNA*NRTQYL
Trigger: CAAGTATTGAGTTCTGTTCAATGCATTGGACATGTG...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTATCAAGGAATCACATATaGAAGAGCCTTGCCAGGCGT +
Preference number: 5 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVSRNHI*KSLARR
Trigger: ACGCCTGGCAAGGCTCTTCAATATGTGATTCCTTGA...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398417.6
CDS-3UTR CAA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAACTGAAGATGGCCGTTTaGGTGGTGAGGCAAATTAGG +
Preference number: 5 (lower is better)
Translates to: NMNMTHFSLSQLPETQQELKMAV*VVRQIR
Trigger: CCTAATTTGCCTCACCACCAAAACGGCCATCTTCAG...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTACCTTTATATATGCACTaGGGTAGATCTTATGAACAG +
Preference number: 5 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLPLYMH*GRSYEQ
Trigger: CTGTTCATAAGATCTACCCAAGTGCATATATAAAGG...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GCTCTGCAGCCCACCAGGTTTTCATCATCTATAAGCATTCACACTTTTCCCTTATCCCAGAGTTTGTACTaGTGTTTTAAAGAACGTTCT +
Preference number: 5 (lower is better)
Translates to: ALQPTRFSSSISIHTFPLSQSLY*CFKERS
Trigger: AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGA...TAAGGGAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAATCACAGGAAAGTGTCTaGGGTCCTGTCCCAGAGTTT +
Preference number: 5 (lower is better)
Translates to: NMNMTHFSLSQLPETQQESQESV*GPVPEF
Trigger: AAACTCTGGGACAGGACCCAAGACACTTTCCTGTGA...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AAAGTGTCTTGGGTCCTGTCCCAGAGTTTGTACTTGTGTTTTAAAGAACGTTCTGAGAAGATAAATGACTaGCCCAAAGGTCACACATCA +
Preference number: 5 (lower is better)
Translates to: KVSWVLSQSLYLCFKERSEKIND*PKGHTS
Trigger: TGATGTGTGACCTTTGGGCAAGTCATTTATCTTCTC...AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATGTCCTGTCCCAGAGTTaGTACTTGTGTTTTAAAGAA +
Preference number: 5 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDVLSQS*YLCFKE
Trigger: TTCTTTAAAACACAAGTACAAACTCTGGGACAGGAC...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAATTGCTTTGTTGTGTGTaGTTTGCTGGTGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: NMNMTHFSLSQLPETQQELLCCV*FAGVLQ
Trigger: CTGGAGGACACCAGCAAACAACACACAACAAAGCAA...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAGAGAAGATAAATGACTaGCCCAAAGGTCACACATCA +
Preference number: 5 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVEKIND*PKGHTS
Trigger: TGATGTGTGACCTTTGGGCAAGTCATTTATCTTCTC...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAATTCACTCTCTCCACCTaGTCTATGGCACATCAAACT +
Preference number: 5 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEFTLST*SMAHQT
Trigger: AGTTTGATGTGCCATAGACAAGGTGGAGAGAGTGAA...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAACCTTCACCATCATACTaGATGGAGCATTACTCTGCA +
Preference number: 5 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEPSPSY*MEHYSA
Trigger: TGCAGAGTAATGCTCCATCAAGTATGATGGTGAAGG...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp TATTTAAAAGACCTTCTGAGCAAGGCAGTAGAAGCTGTGTTCATTCCAGGTGATAACAGAACTCAATACTaGAAGAAAGTTTGCCAACTC +
Preference number: 5 (lower is better)
Translates to: YLKDLLSKAVEAVFIPGDNRTQY*KKVCQL
Trigger: GAGTTGGCAAACTTTCTTCAAGTATTGAGTTCTGTT...ATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAACGTTGCAAGGAAAATaGTTAGACATGTATTCAGGA +
Preference number: 5 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVTLQGK*LDMYSG
Trigger: TCCTGAATACATGTCTAACAATTTTCCTTGCAACGT...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAAAAATGCCAGTAAAGTaGGCAATAACGAAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEKMPVK*AITKGA
Trigger: TGCTCCCTTCGTTATTGCCAACTTTACTGGCATTTT...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTATTAGTTTCCCAAGGTTaGTTTTGCTTTGTTGTGTGT +
Preference number: 5 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVLVSQG*FCFVVC
Trigger: ACACACAACAAAGCAAAACAAACCTTGGGAAACTAA...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp GGATGTCAGACCCTCAATTCTCATAAAGGCACCTATAGGTCAAAAATATCTGTAAACAGAACTCAATACTaGAAGAAAGTTTGCCAACTC +
Preference number: 5 (lower is better)
Translates to: GCQTLNSHKGTYRSKISVNRTQY*KKVCQL
Trigger: GAGTTGGCAAACTTTCTTCAAGTATTGAGTTCTGTT...TACAGATATTTTTGACCTATAGGTGCCTTTATGAGAATTGAGGGTCTGACATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS TCA 90 bp AGCCTCCCATCCAATGTTCTCTGTATGGTAACACATTTACTAGGATaGGCTCCATTTGTAGTTATAGCTGTTATTAAAGAATCCAATTCA +
Preference number: 5 (lower is better)
Translates to: SLPSNVLCMVTHLLG*APFVVIAVIKESNS
Trigger: TGAATTGGATTCTTTAATAACAGCTATAACTACAAATGGAGCTCATCCTAGTAAATGTGTTACCATACAGAGAACATTGGATGGGAGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000588745.5
ENST00000588860.5
ENST00000589076.5
ENST00000589706.1
ENST00000589941.1
ENST00000590061.1
ENST00000592186.5
CDS CCA 90 bp GCACATCAAACTATGCACAATGCTCAGACAGGCATCATTACTTGTTaGTGTATTCGTAATAGACATATTGTCCATTTGTTCAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: AHQTMHNAQTGIITC*CIRNRHIVHLFKFF
Trigger: GAAAAACTTGAACAAATGGACAATATGTCTATTACGAATACACCAACAAGTAATGATGCCTGTCTGAGCATTGTGCATAGTTTGATGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000588860.5
ENST00000589076.5
ENST00000589941.1
ENST00000590061.1
CDS-3UTR CAA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAAACGTTCTAGTAAGTTaGGTTATCTGGTTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: NMNMTHFSLSQLPETQQENVLVS*VIWFPC
Trigger: GCAAGGAAACCAGATAACCAAACTTACTAGAACGTT...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAACCTTTATATATGCACTaGGGTAGATCTTATGAACAG +
Preference number: 5 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEPLYMH*GRSYEQ
Trigger: CTGTTCATAAGATCTACCCAAGTGCATATATAAAGG...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAATTATTGTCATTATCTTaGTATACCAGGGGCGGTAAA +
Preference number: 5 (lower is better)
Translates to: NMNMTHFSLSQLPETQQELLSLS*YTRGGK
Trigger: TTTACCGCCCCTGGTATACAAAGATAATGACAATAA...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAATCCCAGAGTTTGTACTaGTGTTTTAAAGAACGTTCT +
Preference number: 5 (lower is better)
Translates to: NMNMTHFSLSQLPETQQESQSLY*CFKERS
Trigger: AGAACGTTCTTTAAAACACAAGTACAAACTCTGGGA...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAACTGGCTCTGGACCTATaGAGAAAGCATTTAAATAAA +
Preference number: 5 (lower is better)
Translates to: NMNMTHFSLSQLPETQQELALDL*RKHLNK
Trigger: TTTATTTAAATGCTTTCTCAATAGGTCCAGAGCCAG...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS-3UTR CAA 90 bp AATATGAATATGACTCACTTCTCTCTATCTCAACTACCTGAAACTCAGCAAGAAATACTTGAAGAAAGTTaGCCAACTCCATGTTTAGTC +
Preference number: 5 (lower is better)
Translates to: NMNMTHFSLSQLPETQQEILEES*PTPCLV
Trigger: GACTAAACATGGAGTTGGCAAACTTTCTTCAAGTAT...TTCTTGCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342988.8
ENST00000398417.6
CDS GCA 72 bp CCGCAGCGGCGACGACGACCAGGGCCGTGTTGTTGCTaGCAACTTGTCGAGAAGCCACTGAGCATGCGCGCG +
Preference number: 6 (lower is better)
Translates to: PQRRRRPGPCCC*QLVEKPLSMRA
Trigger: CGCGCGCATGCTCAGTGGCTTCTCGACAAGTTGGCAGCAACAACACGGCCCTGGTCGTCGTCGCCGCTGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589076.5
CDS CAA 90 bp GTATTCAGGATAACCGCAGCGGCGACGACGACCAGGGCCGTGTTGTaGCTGCCAACTTGTCGAGAAGCCACTGAGCATGCGCGCGCGGGG +
Preference number: 6 (lower is better)
Translates to: VFRITAAATTTRAVL*LPTCREATEHARAG
Trigger: CCCCGCGCGCGCATGCTCAGTGGCTTCTCGACAAGTTGGCAGCAACAACACGGCCCTGGTCGTCGTCGCCGCTGCGGTTATCCTGAATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589076.5
CDS TCA 72 bp GGCCGTGTTGTTGCTGCCAACTTGTCGAGAAGCCACTaGGCATGCGCGCGCGGGGACCACATCCGGGTAATT +
Preference number: 6 (lower is better)
Translates to: GRVVAANLSRSH*ACARGDHIRVI
Trigger: AATTACCCGGATGTGGTCCCCGCGCGCGCATGCTCAGTGGCTTCTCGACAAGTTGGCAGCAACAACACGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589076.5
CDS CAA 72 bp ATAACCGCAGCGGCGACGACGACCAGGGCCGTGTTGTaGCTGCCAACTTGTCGAGAAGCCACTGAGCATGCG +
Preference number: 6 (lower is better)
Translates to: ITAAATTTRAVL*LPTCREATEHA
Trigger: CGCATGCTCAGTGGCTTCTCGACAAGTTGGCAGCAACAACACGGCCCTGGTCGTCGTCGCCGCTGCGGTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589076.5
CDS CCA 72 bp AGGACTGAGGGCCTTAGTCCTTTGCAGGCTGTTGGCTaGAGACCCCCTCTGTTCCTTGCCATGTGGTGCTCT +
Preference number: 6 (lower is better)
Translates to: RTEGLSPLQAVG*RPPLFLAMWCS
Trigger: AGAGCACCACATGGCAAGGAACAGAGGGGGTCTCCAGCCAACAGCCTGCAAAGGACTAAGGCCCTCAGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588860.5
CDS CAA 72 bp GGGCGGCATAGGCGGGTGGTGCTGAAGATGGCCGTTTaGGTGGTGAGGCAAATTAGGTGTGTATGGTGCAGT +
Preference number: 6 (lower is better)
Translates to: GRHRRVVLKMAV*VVRQIRCVWCS
Trigger: ACTGCACCATACACACCTAATTTGCCTCACCACCAAAACGGCCATCTTCAGCACCACCCGCCTATGCCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000591126.5
ENST00000592186.5
ENST00000611848.1
CDS GCA 72 bp GCCCTGATGCTATCTGCAACAGTCCTTCACTATGGCTaGCCCCCAGTATACTGGCAGGCTGACTTGTGGAAG +
Preference number: 6 (lower is better)
Translates to: ALMLSATVLHYG*PPVYWQADLWK
Trigger: CTTCCACAAGTCAGCCTGCCAGTATACTGGGGGGCAGCCATAGTGAAGGACTGTTGCAGATAGCATCAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000591126.5
ENST00000592186.5
CDS GCA 72 bp GGTGCTCTCCATAGGGAAGCTAACAATATGGCAGCTTaGCTCTTCGAAGCCAGCAACGGGAAGAGTCTCAGC +
Preference number: 6 (lower is better)
Translates to: GALHREANNMAA*LFEASNGKSLS
Trigger: GCTGAGACTCTTCCCGTTGCTGGCTTCGAAGAGGCAAGCTGCCATATTGTTAGCTTCCCTATGGAGAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588860.5
CDS CAA 72 bp CTCGAGAGACGCACAGGACAGTCAAGGAATCACATATaGAAGAGCCTTGCCAGGCGTTGCAAGTGTGAGTGG +
Preference number: 6 (lower is better)
Translates to: LERRTGQSRNHI*KSLARRCKCEW
Trigger: CCACTCACACTTGCAACGCCTGGCAAGGCTCTTCAATATGTGATTCCTTGACTGTCCTGTGCGTCTCTCGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398417.6
CDS CAA 90 bp CAACCTTGCTCTCTCAATGGCTTCTGTCCTGTGGACATTGGAGAGTaGACCCAAACAAAAGCGATCTCCTCCAGAAGGGTCCACGTATCC +
Preference number: 6 (lower is better)
Translates to: QPCSLNGFCPVDIGE*TQTKAISSRRVHVS
Trigger: GGATACGTGGACCCTTCTGGAGGAGATCGCTTTTGTTTGGGTCAACTCTCCAATGTCCACAGGACAGAAGCCATTGAGAGAGCAAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000588745.5
ENST00000591126.5
ENST00000611848.1
CDS GCA 72 bp GCCGTTTTGGTGGTGAGGCAAATTAGGTGTGTATGGTaGAGTCCTACTTCCAGTCCAGGTGGTAGTGCTGTT +
Preference number: 6 (lower is better)
Translates to: AVLVVRQIRCVW*SPTSSPGGSAV
Trigger: AACAGCACTACCACCTGGACTGGAAGTAGGACTGCACCATACACACCTAATTTGCCTCACCACCAAAACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000591126.5
ENST00000592186.5
CDS CCA 72 bp ATGGCCGTTTTGGTGGTGAGGCAAATTAGGTGTGTATaGTGCAGTCCTACTTCCAGTCCAGGTGGTAGTGCT +
Preference number: 6 (lower is better)
Translates to: MAVLVVRQIRCV*CSPTSSPGGSA
Trigger: AGCACTACCACCTGGACTGGAAGTAGGACTGCACCATACACACCTAATTTGCCTCACCACCAAAACGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000591126.5
ENST00000592186.5
CDS TCA 72 bp GATTCCAGGCATGGCTTAGCTGGGTCCTCTACAAAGTaGGGCTGGAACAAAGGATCTGCTTCCAAGTTCATG +
Preference number: 6 (lower is better)
Translates to: DSRHGLAGSSTK*GWNKGSASKFM
Trigger: CATGAACTTGGAAGCAGATCCTTTGTTCCAGCCTCACTTTGTAGAGGACCCAGCTAAGCCATGCCTGGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588860.5
CDS CCA 72 bp AGTCCAGGTGGTAGTGCTGTTATGATGGTAAGTAGCTaGCTGACCAGTAAATCCATTCTGCTGCTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: SPGGSAVMMVSS*LTSKSILLLSW
Trigger: CCAGGACAGCAGCAGAATGGATTTACTGGTCAGCCAGCTACTTACCATCATAACAGCACTACCACCTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000591126.5
ENST00000592186.5
CDS CCA 72 bp AGATTCTCTGAGTCAGGATTCCAGGCATGGCTTAGCTaGGTCCTCTACAAAGTGAGGCTGGAACAAAGGATC +
Preference number: 6 (lower is better)
Translates to: RFSESGFQAWLS*VLYKVRLEQRI
Trigger: GATCCTTTGTTCCAGCCTCACTTTGTAGAGGACCCAGCTAAGCCATGCCTGGAATCCTGACTCAGAGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588860.5
CDS CCA 72 bp CAGGATAACAGATTCTCTGAGTCAGGATTCCAGGCATaGCTTAGCTGGGTCCTCTACAAAGTGAGGCTGGAA +
Preference number: 6 (lower is better)
Translates to: QDNRFSESGFQA*LSWVLYKVRLE
Trigger: TTCCAGCCTCACTTTGTAGAGGACCCAGCTAAGCCATGCCTGGAATCCTGACTCAGAGAATCTGTTATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588860.5
CDS CAA 72 bp GGCTGGAACAAAGGATCTGCTTCCAAGTTCATGTGGTaGTTGGCACCATTCAGTTCCTTGCAGGCTACAGGA +
Preference number: 6 (lower is better)
Translates to: GWNKGSASKFMW*LAPFSSLQATG
Trigger: TCCTGTAGCCTGCAAGGAACTGAATGGTGCCAACAACCACATGAACTTGGAAGCAGATCCTTTGTTCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588860.5
CDS CAA 90 bp CTAACAGAGCTGGGGTGCTGTATGTCTCTGTCGATGCACGATTACTaGGTGGATGCTGGATGGTTTGAATTGAATGTCCTTCAGTGGACA +
Preference number: 6 (lower is better)
Translates to: LTELGCCMSLSMHDY*VDAGWFELNVLQWT
Trigger: TGTCCACTGAAGGACATTCAATTCAAACCATCCAGCATCCACCAAGTAATCGTGCATCGACAGAGACATACAGCACCCCAGCTCTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000588745.5
ENST00000591126.5
ENST00000592186.5
ENST00000592911.5
CDS CAA 90 bp TCTCTGTCGATGCACGATTACTTGGTGGATGCTGGATGGTTTGAATaGAATGTCCTTCAGTGGACAACGATGGCTGTCCCTCAAAGTCAT +
Preference number: 6 (lower is better)
Translates to: SLSMHDYLVDAGWFE*NVLQWTTMAVPQSH
Trigger: ATGACTTTGAGGGACAGCCATCGTTGTCCACTGAAGGACATTCAATTCAAACCATCCAGCATCCACCAAGTAATCGTGCATCGACAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000585448.1
ENST00000588745.5
ENST00000591126.5
ENST00000592186.5
ENST00000592911.5
CDS CAA 90 bp GTGCCACGTGTTTCCATCATAAAAGTCTATAGTCAGGAGTTTAACTaGATAGCTGGAGCTATTCCACCTACTGATCCTGGGCCAGGGATG +
Preference number: 6 (lower is better)
Translates to: VPRVSIIKVYSQEFN*IAGAIPPTDPGPGM
Trigger: CATCCCTGGCCCAGGATCAGTAGGTGGAATAGCTCCAGCTATCAAGTTAAACTCCTGACTATAGACTTTTATGATGGAAACACGTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611848.1
CDS TCA 72 bp GTCGATGCACGATTACTTGGTGGATGCTGGATGGTTTaGATTGAATGTCCTTCAGTGGACAACGATGGCTGT +
Preference number: 6 (lower is better)
Translates to: VDARLLGGCWMV*IECPSVDNDGC
Trigger: ACAGCCATCGTTGTCCACTGAAGGACATTCAATTCAAACCATCCAGCATCCACCAAGTAATCGTGCATCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000585448.1
ENST00000588745.5
ENST00000591126.5
ENST00000592186.5
ENST00000592911.5
CDS CCA 72 bp GTGGATGCTGGATGGTTTGAATTGAATGTCCTTCAGTaGACAACGATGGCTGTCCCTCAAAGTCATGCACAT +
Preference number: 6 (lower is better)
Translates to: VDAGWFELNVLQ*TTMAVPQSHAH
Trigger: ATGTGCATGACTTTGAGGGACAGCCATCGTTGTCCACTGAAGGACATTCAATTCAAACCATCCAGCATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000585448.1
ENST00000588745.5
ENST00000591126.5
ENST00000592186.5
ENST00000592911.5
CDS CAA 72 bp ATGCACGATTACTTGGTGGATGCTGGATGGTTTGAATaGAATGTCCTTCAGTGGACAACGATGGCTGTCCCT +
Preference number: 6 (lower is better)
Translates to: MHDYLVDAGWFE*NVLQWTTMAVP
Trigger: AGGGACAGCCATCGTTGTCCACTGAAGGACATTCAATTCAAACCATCCAGCATCCACCAAGTAATCGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000585448.1
ENST00000588745.5
ENST00000591126.5
ENST00000592186.5
ENST00000592911.5
CDS CAA 72 bp CTGGGGTGCTGTATGTCTCTGTCGATGCACGATTACTaGGTGGATGCTGGATGGTTTGAATTGAATGTCCTT +
Preference number: 6 (lower is better)
Translates to: LGCCMSLSMHDY*VDAGWFELNVL
Trigger: AAGGACATTCAATTCAAACCATCCAGCATCCACCAAGTAATCGTGCATCGACAGAGACATACAGCACCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000588745.5
ENST00000591126.5
ENST00000592186.5
ENST00000592911.5
CDS GCA 72 bp CCTTCAGTGGACAACGATGGCTGTCCCTCAAAGTCATaGACATATTCATCCTTCACCATCATACTTGATGGA +
Preference number: 6 (lower is better)
Translates to: PSVDNDGCPSKS*TYSSFTIILDG
Trigger: TCCATCAAGTATGATGGTGAAGGATGAATATGTGCATGACTTTGAGGGACAGCCATCGTTGTCCACTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000585448.1
ENST00000588745.5
ENST00000591126.5
ENST00000592186.5
ENST00000592911.5
CDS CCA 72 bp TCTCTGTCGATGCACGATTACTTGGTGGATGCTGGATaGTTTGAATTGAATGTCCTTCAGTGGACAACGATG +
Preference number: 6 (lower is better)
Translates to: SLSMHDYLVDAG*FELNVLQWTTM
Trigger: CATCGTTGTCCACTGAAGGACATTCAATTCAAACCATCCAGCATCCACCAAGTAATCGTGCATCGACAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000585448.1
ENST00000588745.5
ENST00000591126.5
ENST00000592186.5
ENST00000592911.5
CDS CAA 72 bp ACATCACCTTCACCTTTACATTCCAACTGCACACCTTaGCCTATGTGCAACCTTGCTCTCTCAATGGCTTCT +
Preference number: 6 (lower is better)
Translates to: TSPSPLHSNCTP*PMCNLALSMAS
Trigger: AGAAGCCATTGAGAGAGCAAGGTTGCACATAGGCAAAGGTGTGCAGTTGGAATGTAAAGGTGAAGGTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000588745.5
ENST00000591126.5
ENST00000611848.1
CDS GCA 72 bp CTCCACCTTGTCTATGGCACATCAAACTATGCACAATaGTCAGACAGGCATCATTACTTGTTGGTGTATTCG +
Preference number: 6 (lower is better)
Translates to: LHLVYGTSNYAQ*SDRHHYLLVYS
Trigger: CGAATACACCAACAAGTAATGATGCCTGTCTGAGCATTGTGCATAGTTTGATGTGCCATAGACAAGGTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000588745.5
ENST00000588860.5
ENST00000589076.5
ENST00000589941.1
ENST00000590061.1
ENST00000592186.5
CDS TCA 72 bp CTGGGATCTTTTTACCAACTTACTGGTTTTGCTAGCTaGTTTGAGGATACAACTGGTCAACTTGGTACTCAC +
Preference number: 6 (lower is better)
Translates to: LGSFYQLTGFAS*FEDTTGQLGTH
Trigger: GTGAGTACCAAGTTGACCAGTTGTATCCTCAAATCAGCTAGCAAAACCAGTAAGTTGGTAAAAAGATCCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591126.5
CDS CAA 72 bp GATCTTTTTACCAACTTACTGGTTTTGCTAGCTGATTaGAGGATACAACTGGTCAACTTGGTACTCACTGCT +
Preference number: 6 (lower is better)
Translates to: DLFTNLLVLLAD*RIQLVNLVLTA
Trigger: AGCAGTGAGTACCAAGTTGACCAGTTGTATCCTCAAATCAGCTAGCAAAACCAGTAAGTTGGTAAAAAGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591126.5
CDS CCA 72 bp ACTATGCACAATGCTCAGACAGGCATCATTACTTGTTaGTGTATTCGTAATAGACATATTGTCCATTTGTTC +
Preference number: 6 (lower is better)
Translates to: TMHNAQTGIITC*CIRNRHIVHLF
Trigger: GAACAAATGGACAATATGTCTATTACGAATACACCAACAAGTAATGATGCCTGTCTGAGCATTGTGCATAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342988.8
ENST00000398417.6
ENST00000588860.5
ENST00000589076.5
ENST00000589941.1
ENST00000590061.1
CDS CAA 72 bp TATAATGACTGGGATCTTTTTACCAACTTACTGGTTTaGCTAGCTGATTTGAGGATACAACTGGTCAACTTG +
Preference number: 6 (lower is better)
Translates to: YNDWDLFTNLLV*LADLRIQLVNL
Trigger: CAAGTTGACCAGTTGTATCCTCAAATCAGCTAGCAAAACCAGTAAGTTGGTAAAAAGATCCCAGTCATTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591126.5
CDS CAA 90 bp TTTTGTTGTTATAATGACTGGGATCTTTTTACCAACTTACTGGTTTaGCTAGCTGATTTGAGGATACAACTGGTCAACTTGGTACTCACT +
Preference number: 6 (lower is better)
Translates to: FCCYNDWDLFTNLLV*LADLRIQLVNLVLT
Trigger: AGTGAGTACCAAGTTGACCAGTTGTATCCTCAAATCAGCTAGCAAAACCAGTAAGTTGGTAAAAAGATCCCAGTCATTATAACAACAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591126.5
CDS CCA 72 bp TATCTTTTTGTTAATTTCACACTGTGGAGATATGAGTaGGATCTGATAGATATCCAATCCCAGGATCTAGAA +
Preference number: 6 (lower is better)
Translates to: YLFVNFTLWRYE*DLIDIQSQDLE
Trigger: TTCTAGATCCTGGGATTGGATATCTATCAGATCCCACTCATATCTCCACAGTGTGAAATTAACAAAAAGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591126.5
CDS CAA 72 bp GTATACGTTTTGTGTAAGAAAGGAGGTATGTATTTTTaGCATATAGAAACCCTGGAAGGAAACACCAGAAAC +
Preference number: 6 (lower is better)
Translates to: VYVLCKKGGMYF*HIETLEGNTRN
Trigger: GTTTCTGGTGTTTCCTTCCAGGGTTTCTATATGCAAAAAATACATACCTCCTTTCTTACACAAAACGTATAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591126.5