RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMAD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000166949

Ensembl transcript IDs: ENST00000327367.9, ENST00000439724.7, ENST00000537194.6, ENST00000540846.6, ENST00000558428.5, ENST00000558739.1, ENST00000558763.1, ENST00000558827.1, ENST00000558894.5, ENST00000559092.1, ENST00000559460.5, ENST00000559937.1, ENST00000560175.5, ENST00000560402.1, ENST00000560424.1, ENST00000679624.1, ENST00000680689.1, ENST00000681239.1

Found 1133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGTGCTAGCTGCACTTGGGTCAGTCTCAGCACAAGCTGCAAGGTaGAGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCG +
Preference number: 1 (lower is better)
Translates to: PVLAALGSVSAQAAR*RCHGGEPRAGATHA
Trigger: CGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCTTCACCTTGCAGCTTGTGCTGAGACTGACCCAAGTGCAGCTAGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 90 bp CTGTGTCCCAGTGCTAGCTGCACTTGGGTCAGTCTCAGCACAAGCTaGAAGGTGAAGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAAC +
Preference number: 1 (lower is better)
Translates to: LCPSASCTWVSLSTS*KVKMSWRGAQGRGN
Trigger: GTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCTTCACCTTGCAGCTTGTGCTGAGACTGACCCAAGTGCAGCTAGCACTGGGACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 90 bp TGTTCACTGGAAGAGGCACTGTCACAAGCGTCAGAGAGCTGGGCATaGGGTCTGCATGGCCCTGCGGGCTCTTCCTACCTAGAACGCCCT +
Preference number: 1 (lower is better)
Translates to: CSLEEALSQASESWA*GLHGPAGSSYLERP
Trigger: AGGGCGTTCTAGGTAGGAAGAGCCCGCAGGGCCATGCAGACCTCATGCCCAGCTCTCTGACGCTTGTGACAGTGCCTCTTCCAGTGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 90 bp ACTGTCACAAGCGTCAGAGAGCTGGGCATGAGGTCTGCATGGCCCTaGGGGCTCTTCCTACCTAGAACGCCCTTCCAAGGTGAACTCCAC +
Preference number: 1 (lower is better)
Translates to: TVTSVRELGMRSAWP*GLFLPRTPFQGELH
Trigger: GTGGAGTTCACCTTGGAAGGGCGTTCTAGGTAGGAAGAGCCCGCAGGGCCATGCAGACCTCATGCCCAGCTCTCTGACGCTTGTGACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 90 bp AGAGGCACTGTCACAAGCGTCAGAGAGCTGGGCATGAGGTCTGCATaGCCCTGCGGGCTCTTCCTACCTAGAACGCCCTTCCAAGGTGAA +
Preference number: 1 (lower is better)
Translates to: RGTVTSVRELGMRSA*PCGLFLPRTPFQGE
Trigger: TTCACCTTGGAAGGGCGTTCTAGGTAGGAAGAGCCCGCAGGGCCATGCAGACCTCATGCCCAGCTCTCTGACGCTTGTGACAGTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 90 bp CAAGCTCTTACAGATGACTGGAGACGCACCCAGTGTGGTGCTGCCTaGGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAG +
Preference number: 1 (lower is better)
Translates to: QALTDDWRRTQCGAA*DQMPSHDKGLLLHE
Trigger: CTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTCAGGCAGCACCACACTGGGTGCGTCTCCAGTCATCTGTAAGAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 90 bp GTGGCGCTCATCGATTTTTCCCGCTGTCCTGTGTGCAGGTTCTGCTaGACACGCACCTCCCAATCAGTATGTTCTGAGAGGGGAGGGAGA +
Preference number: 1 (lower is better)
Translates to: VALIDFSRCPVCRFC*TRTSQSVCSERGGR
Trigger: TCTCCCTCCCCTCTCAGAACATACTGATTGGGAGGTGCGTGTTCAGCAGAACCTGCACACAGGACAGCGGGAAAAATCGATGAGCGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 90 bp CTGAGTCAACCCTCCTTCGAGAAGACTCACACAAGTCTGTCAAGGTaGTCCTTCCGTCTCTTCCTGTGTCCTCAGGAGGCTTGGGGAGCA +
Preference number: 1 (lower is better)
Translates to: LSQPSFEKTHTSLSR*SFRLFLCPQEAWGA
Trigger: TGCTCCCCAAGCCTCCTGAGGACACAGGAAGAGACGGAAGGAGCACCTTGACAGACTTGTGTGAGTCTTCTCGAAGGAGGGTTGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 90 bp TGTCTCAAAATGTCAGGTCTACAGCCTGCCAGGAAGGTGGCCAACTaGGATGATGTTCCAGCACAGGCCTGTAATCCAAACCGGCTGGGG +
Preference number: 1 (lower is better)
Translates to: CLKMSGLQPARKVAN*DDVPAQACNPNRLG
Trigger: CCCCAGCCGGTTTGGATTACAGGCCTGTGCTGGAACATCATCTCAGTTGGCCACCTTCCTGGCAGGCTGTAGACCTGACATTTTGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 90 bp GAAGGTGCTGAAGACAAGGATCTGTGTCCCAGTGCTAGCTGCACTTaGGTCAGTCTCAGCACAAGCTGCAAGGTGAAGATGTCATGGCGG +
Preference number: 1 (lower is better)
Translates to: EGAEDKDLCPSASCT*VSLSTSCKVKMSWR
Trigger: CCGCCATGACATCTTCACCTTGCAGCTTGTGCTGAGACTGACCCAAGTGCAGCTAGCACTGGGACACAGATCCTTGTCTTCAGCACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 90 bp ATGCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTaGCTGTGCCCCAACTCTTCCAGCCACTGTCCTTGGGAGGAGAGA +
Preference number: 1 (lower is better)
Translates to: MLSQKATTPSTNIQN*LCPNSSSHCPWEER
Trigger: TCTCTCCTCCCAAGGACAGTGGCTGGAAGAGTTGGGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 90 bp AGATGGCTCCATCTCTCTGTAATGCTTTCACCCCTAGCAAGGGAGTaGGGCTTGGTTCAGAGGACCCTTGTGGAAGGGCCCAGATTTGAC +
Preference number: 1 (lower is better)
Translates to: RWLHLSVMLSPLARE*GLVQRTLVEGPRFD
Trigger: GTCAAATCTGGGCCCTTCCACAAGGGTCCTCTGAACCAAGCCCCACTCCCTTGCTAGGGGTGAAAGCATTACAGAGAGATGGAGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 90 bp CTAGCCAAGTCACACAGTAAGAAACAGGGTCCAGGGCTAAACGGGTaGACTCTCTTGCTGCTGGTATCCCCCTTGGTGAACAGTCCTACA +
Preference number: 1 (lower is better)
Translates to: LAKSHSKKQGPGLNG*TLLLLVSPLVNSPT
Trigger: TGTAGGACTGTTCACCAAGGGGGATACCAGCAGCAAGAGAGTGCACCCGTTTAGCCCTGGACCCTGTTTCTTACTGTGTGACTTGGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 90 bp TCCTTGGAAGGTGCTGAAGACAAGGATCTGTGTCCCAGTGCTAGCTaGACTTGGGTCAGTCTCAGCACAAGCTGCAAGGTGAAGATGTCA +
Preference number: 1 (lower is better)
Translates to: SLEGAEDKDLCPSAS*TWVSLSTSCKVKMS
Trigger: TGACATCTTCACCTTGCAGCTTGTGCTGAGACTGACCCAAGTGCAGCTAGCACTGGGACACAGATCCTTGTCTTCAGCACCTTCCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 90 bp AGCTGTCTGTTTTTACACGCGGCCACTTGTTTAGCCAGCCTGGTTTaGTGTTTCTGGATGCTGAGCCAAAAAGCCACTACACCCTCCACC +
Preference number: 1 (lower is better)
Translates to: SCLFLHAATCLASLV*CFWMLSQKATTPST
Trigger: GGTGGAGGGTGTAGTGGCTTTTTGGCTCAGCATCCAGAAACACCAAACCAGGCTGGCTAAACAAGTGGCCGCGTGTAAAAACAGACAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 90 bp GGCCCTCTCAGAGGAAGTGAGGGGTTTTGTATTGTCTCTGGGTTCTaGGTCAACCCTCCTTCGAGAAGACTCACACAAGTCTGTCAAGGT +
Preference number: 1 (lower is better)
Translates to: GPLRGSEGFCIVSGF*VNPPSRRLTQVCQG
Trigger: ACCTTGACAGACTTGTGTGAGTCTTCTCGAAGGAGGGTTGACTCAGAACCCAGAGACAATACAAAACCCCTCACTTCCTCTGAGAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 90 bp TCTAGGCTTGTCTCAAAATGTCAGGTCTACAGCCTGCCAGGAAGGTaGCCAACTGAGATGATGTTCCAGCACAGGCCTGTAATCCAAACC +
Preference number: 1 (lower is better)
Translates to: SRLVSKCQVYSLPGR*PTEMMFQHRPVIQT
Trigger: GGTTTGGATTACAGGCCTGTGCTGGAACATCATCTCAGTTGGCCACCTTCCTGGCAGGCTGTAGACCTGACATTTTGAGACAAGCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 90 bp AGGCACATACTTCAGACTCACAGCATTTGGCCCTCTCAGAGGAAGTaGGGGGTTTTGTATTGTCTCTGGGTTCTGAGTCAACCCTCCTTC +
Preference number: 1 (lower is better)
Translates to: RHILQTHSIWPSQRK*GVLYCLWVLSQPSF
Trigger: GAAGGAGGGTTGACTCAGAACCCAGAGACAATACAAAACCCCTCACTTCCTCTGAGAGGGCCAAATGCTGTGAGTCTGAAGTATGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 90 bp GTGGTGCTGCCTGAGACCAAATGCCATCCCACGACAAGGGCCTCCTaGTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTA +
Preference number: 1 (lower is better)
Translates to: VVLPETKCHPTTRAS*FMRTLTVIRISLRL
Trigger: TAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTCAGGCAGCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTaGCAGACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGT +
Preference number: 1 (lower is better)
Translates to: RHFLPFKVGPKGKCV*QTQLFITSTSGFAR
Trigger: ACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR CCA 90 bp TTTTTACACGCGGCCACTTGTTTAGCCAGCCTGGTTTGGTGTTTCTaGATGCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAG +
Preference number: 1 (lower is better)
Translates to: FLHAATCLASLVWCF*MLSQKATTPSTNIQ
Trigger: CTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGCATCCAGAAACACCAAACCAGGCTGGCTAAACAAGTGGCCGCGTGTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 90 bp ATTTCAGCTTGCAGAAGTGCTGGCAGGTATCTCTTCAACAAAACCTaGAAAAGCTTCACCTCAGGAGAGAGAAGGGAGAGAAGCAGTTGC +
Preference number: 1 (lower is better)
Translates to: ISACRSAGRYLFNKT*KSFTSGERRERSSC
Trigger: GCAACTGCTTCTCTCCCTTCTCTCTCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGCACTTCTGCAAGCTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 90 bp AACCATGACTGCTCTAGCAGAAGCCAAAATGGAATATTTGGTTCCTaGGTCTCAGAGCTGGCTGGGAACATGAACACATGTACAGGAGGT +
Preference number: 1 (lower is better)
Translates to: NHDCSSRSQNGIFGS*VSELAGNMNTCTGG
Trigger: ACCTCCTGTACATGTGTTCATGTTCCCAGCCAGCTCTGAGACCCAGGAACCAAATATTCCATTTTGGCTTCTGCTAGAGCAGTCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 90 bp GCTTCATCATCATTTTGGATCCATGTCCTCTTGCGTACGTTTTTCTaGTTTCCCTACCCACTTGAGAAGCGGCTGATGCTCCTTAAACTG +
Preference number: 1 (lower is better)
Translates to: ASSSFWIHVLLRTFF*FPYPLEKRLMLLKL
Trigger: CAGTTTAAGGAGCATCAGCCGCTTCTCAAGTGGGTAGGGAAAGCAGAAAAACGTACGCAAGAGGACATGGATCCAAAATGATGATGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 90 bp GCCCTTTTCATTTGCCTATGTTGGCCTGAGATGTTTCCCTTCTGGTaGATTTGCTTCTGTAAATTTCAGCTTGCAGAAGTGCTGGCAGGT +
Preference number: 1 (lower is better)
Translates to: ALFICLCWPEMFPFW*ICFCKFQLAEVLAG
Trigger: ACCTGCCAGCACTTCTGCAAGCTGAAATTTACAGAAGCAAATTCACCAGAAGGGAAACATCTCAGGCCAACATAGGCAAATGAAAAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 90 bp GATCCTCTACCGGGAGCTAGATCATCTTATATCCCAGGGGGAAGATaGCAGACCTCTTTGTACCAAGCCTGCAATTTTCAAAGGTGTAAA +
Preference number: 1 (lower is better)
Translates to: DPLPGARSSYIPGGR*QTSLYQACNFQRCK
Trigger: TTTACACCTTTGAAAATTGCAGGCTTGGTACAAAGAGGTCTGTCATCTTCCCCCTGGGATATAAGATGATCTAGCTCCCGGTAGAGGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 90 bp AACACAAAACTCAAACTTCATGCTCCTAGAAGTAGCCTTCAGGTCTaGGCAATGAGGGTTCTAAGACACCATCCAAATGCAGCCAAACGT +
Preference number: 1 (lower is better)
Translates to: NTKLKLHAPRSSLQV*AMRVLRHHPNAAKR
Trigger: ACGTTTGGCTGCATTTGGATGGTGTCTTAGAACCCTCATTGCTCAGACCTGAAGGCTACTTCTAGGAGCATGAAGTTTGAGTTTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 90 bp CCTTCTGGTGAATTTGCTTCTGTAAATTTCAGCTTGCAGAAGTGCTaGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGG +
Preference number: 1 (lower is better)
Translates to: PSGEFASVNFSLQKC*QVSLQQNLEKLHLR
Trigger: CCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGCACTTCTGCAAGCTGAAATTTACAGAAGCAAATTCACCAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 90 bp TTCCCTTCTGGTGAATTTGCTTCTGTAAATTTCAGCTTGCAGAAGTaGTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTC +
Preference number: 1 (lower is better)
Translates to: FPSGEFASVNFSLQK*WQVSLQQNLEKLHL
Trigger: GAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGCACTTCTGCAAGCTGAAATTTACAGAAGCAAATTCACCAGAAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 90 bp AGAATGAAACAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTaGATGCCATGCACACACTACTTCAAACCTTTCTGTAGTCTTGAG +
Preference number: 1 (lower is better)
Translates to: RMKQIFASSPDYLHT*MPCTHYFKPFCSLE
Trigger: CTCAAGACTACAGAAAGGTTTGAAGTAGTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTGTTTCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 90 bp CTCCCTCTAACATCAGAAATCTCATCACATTTGAGCTGTATGACTTaGCAAAAGTATATACACTTCCTTCCCTTCACCTGGAATAAAGCA +
Preference number: 1 (lower is better)
Translates to: LPLTSEISSHLSCMT*QKYIHFLPFTWNKA
Trigger: TGCTTTATTCCAGGTGAAGGGAAGGAAGTGTATATACTTTTGGCAAGTCATACAGCTCAAATGTGATGAGATTTCTGATGTTAGAGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 90 bp CATTCGAATCTCTTTGAGATTAATGTGATAATAGACACTATACATTaGATATGCACTGGGCCTCAGCAGATCCTTCCAACTTTTCAAAGT +
Preference number: 1 (lower is better)
Translates to: HSNLFEINVIIDTIH*ICTGPQQILPTFQS
Trigger: ACTTTGAAAAGTTGGAAGGATCTGCTGAGGCCCAGTGCATATGCAATGTATAGTGTCTATTATCACATTAATCTCAAAGAGATTCGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 90 bp AATCTCTTTGAGATTAATGTGATAATAGACACTATACATTGCATATaGACTGGGCCTCAGCAGATCCTTCCAACTTTTCAAAGTGAAAAA +
Preference number: 1 (lower is better)
Translates to: NLFEINVIIDTIHCI*TGPQQILPTFQSEK
Trigger: TTTTTCACTTTGAAAAGTTGGAAGGATCTGCTGAGGCCCAGTGCATATGCAATGTATAGTGTCTATTATCACATTAATCTCAAAGAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp AGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTAACGCCCTTCCAAGGTaGACTCCACACTGCAGTCCT +
Preference number: 2 (lower is better)
Translates to: RCHGGEPRAGATHAVVLTNALPR*TPHCSP
Trigger: AGGACTGCAGTGTGGAGTTCACCTTGGAAGGGCGTT...AGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp AGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTGGGCCTCCTGCTTCATaGGAACACTTACCGTCATTC +
Preference number: 2 (lower is better)
Translates to: RCHGGEPRAGATHAVVLTGPPAS*EHLPSF
Trigger: GAATGACGGTAAGTGTTCTCATGAAGCAGGAGGCCC...AGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp AGCTGCAAGGTGAAGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCCAGAAAACAGGTGGGTaGACCCCTTCAGTTGAGGGA +
Preference number: 2 (lower is better)
Translates to: SCKVKMSWRGAQGRGNTRQKTGG*TPSVEG
Trigger: TCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTG...GCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCTTCACCTTGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp AGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTGCAGACGCCATTTCTTaGCCTTCAAAGTGGGGCCAA +
Preference number: 2 (lower is better)
Translates to: RCHGGEPRAGATHAVVLTADAIS*PSKWGQ
Trigger: TTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGC...AGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp TGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTAGGGTGCACCCCTTCAGTTaGGGGAGAAAGATTTCTTCT +
Preference number: 2 (lower is better)
Translates to: CHGGEPRAGATHAVVLTRVHPFS*GRKISS
Trigger: AGAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCAC...CCTAGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp AGCTGCAAGGTGAAGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCATCCCAGGGGGAAGATaGCAGACCTCTTTGTACCAA +
Preference number: 2 (lower is better)
Translates to: SCKVKMSWRGAQGRGNTRIPGGR*QTSLYQ
Trigger: TTGGTACAAAGAGGTCTGTCATCTTCCCCCTGGGAT...GCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCTTCACCTTGCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCAGCAAGCTCTTACAGATaGCTGGAGACGCACCCAGTG +
Preference number: 2 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPASSYR*LETHPV
Trigger: CACTGGGTGCGTCTCCAGTCATCTGTAAGAGCTTGC...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp GAGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAGAACACTTACCGCTGGGCATGAGGTCTaGATGGCCCTGCGGGCTCTT +
Preference number: 2 (lower is better)
Translates to: ETKCHPTTRASCFMRTLTAGHEV*MALRAL
Trigger: AAGAGCCCGCAGGGCCATGCAGACCTCATGCCCAGC...GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp TACAACACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCACAAGGGGCAAGGTCTaGTGGAGTGGTGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: YNTDNIRTMETSASSLALTRGKV*WSGGAG
Trigger: CCCCGCCCCACCACTCCAGCAGACCTTGCCCCTTGT...GAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTGTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp CATGGCCCTGCGGGCTCTTCCTACCTAGAACGCCCTTCCAAGGTGAACTCCACATCTCCACCTCCTGCATaGCCATTTTCCCCAAGCCTG +
Preference number: 2 (lower is better)
Translates to: HGPAGSSYLERPSKVNSTSPPPA*PFSPSL
Trigger: CAGGCTTGGGGAAAATGGCCATGCAGGAGGTGGAGA...TGTGGAGTTCACCTTGGAAGGGCGTTCTAGGTAGGAAGAGCCCGCAGGGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp TGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCACAGTGTGGTGCTGCCTaGGACCAAATGCCATCCCAC +
Preference number: 2 (lower is better)
Translates to: WIMQALGNCCPWLLGEEPQCGAA*DQMPSH
Trigger: GTGGGATGGCATTTGGTCTCAGGCAGCACCACACTG...TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGCAAGCTCTTACAGATaGCTGGAGACGCACCCAGTG +
Preference number: 2 (lower is better)
Translates to: SRWIMQALGNCCPWLLGEASSYR*LETHPV
Trigger: CACTGGGTGCGTCTCCAGTCATCTGTAAGAGCTTGC...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCACAGAAAACAGGTGGGTaGACCCCTTCAGTTGAGGGA +
Preference number: 2 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPQKTGG*TPSVEG
Trigger: TCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTG...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp AGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTAGTTTTCTCCCTAATTaGTGCTGGGAGCAGTACTTG +
Preference number: 2 (lower is better)
Translates to: RCHGGEPRAGATHAVVLTSFLPN*CWEQYL
Trigger: CAAGTACTGCTCCCAGCAGCAATTAGGGAGAAAACT...AGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTGGGGCGGGGCTGGGCTaGGAATGTTCACTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: NIRTMETSASSLALMCALGAGLG*ECSLEE
Trigger: CTCTTCCAGTGAACATTCCCAGCCCAGCCCCGCCCC...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp TGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCATGTCCTCAGGAGGCTTaGGGAGCAGCTGTCCTACCT +
Preference number: 2 (lower is better)
Translates to: WIMQALGNCCPWLLGEEPCPQEA*GAAVLP
Trigger: AGGTAGGACAGCTGCTCCCCAAGCCTCCTGAGGACA...TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp AGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTACTTCCATAGATCACTaGATCACCAGAATCAGGCTG +
Preference number: 2 (lower is better)
Translates to: RCHGGEPRAGATHAVVLTTSIDH*ITRIRL
Trigger: CAGCCTGATTCTGGTGATCCAGTGATCTATGGAAGT...AGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 90 bp GGGAGTGGGGCTTGGTTCAGAGGACCCTTGTGGAAGGGCCCAGATTaGACTCAGAGCTGTCTGTTTTTACACGCGGCCACTTGTTTAGCC +
Preference number: 2 (lower is better)
Translates to: GSGAWFRGPLWKGPD*TQSCLFLHAATCLA
Trigger: GGCTAAACAAGTGGCCGCGTGTAAAAACAGACAGCTCTGAGTCAAATCTGGGCCCTTCCACAAGGGTCCTCTGAACCAAGCCCCACTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGCCAATCAGTATGTTCTaGGAGGGGAGGGAGACAGAC +
Preference number: 2 (lower is better)
Translates to: SRWIMQALGNCCPWLLGEPISMF*EGRETD
Trigger: GTCTGTCTCCCTCCCCTCTCAGAACATACTGATTGG...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp GTCACCGGTGATCCTCTACCGGGAGCTAGATCATCTTATATCCCAGGGGGAAGACAGTGTGGTGCTGCCTaGGACCAAATGCCATCCCAC +
Preference number: 2 (lower is better)
Translates to: VTGDPLPGARSSYIPGGRQCGAA*DQMPSH
Trigger: GTGGGATGGCATTTGGTCTCAGGCAGCACCACACTG...TCTTCCCCCTGGGATATAAGATGATCTAGCTCCCGGTAGAGGATCACCGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGGGTGGCCAACTGAGATaGTGTTCCAGCACAGGCCTG +
Preference number: 2 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVGGQLR*CSSTGL
Trigger: CAGGCCTGTGCTGGAACATCATCTCAGTTGGCCACC...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp GCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTGGCTGTGCCCCTGTGGAGACCCTCATaGGGCCTGAGGCTAAGAATG +
Preference number: 2 (lower is better)
Translates to: AEPKSHYTLHQHSELAVPLWRPS*GLRLRM
Trigger: CATTCTTAGCCTCAGGCCTCATGAGGGTCTCCACAG...GGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGACGCACCCAGTGTGGTaGTGCCTGAGACCAAATGCC +
Preference number: 2 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVTHPVW*CLRPNA
Trigger: GGCATTTGGTCTCAGGCAGCACCACACTGGGTGCGT...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCAGCTGGGAATGTTCACTaGAAGAGGCACTGTCACAAG +
Preference number: 2 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPAGNVH*KRHCHK
Trigger: CTTGTGACAGTGCCTCTTCCAGTGAACATTCCCAGC...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAGAGAAGCAGTTGCTaGGTCTCACTCAGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: SRWIMQALGNCCPWLLGEERSSC*VSLRFP
Trigger: GGGAAACCTGAGTGAGACCCAGCAACTGCTTCTCTC...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp CCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCATGACTGCTCTAGCATGTCCTCAGGAGGCTTaGGGAGCAGCTGTCCTACCT +
Preference number: 2 (lower is better)
Translates to: PRKLLPMAFRRGTMTALACPQEA*GAAVLP
Trigger: AGGTAGGACAGCTGCTCCCCAAGCCTCCTGAGGACA...TGCTAGAGCAGTCATGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCAGGTCTCAGAGCTGGCTaGGAACATGAACACATGTAC +
Preference number: 2 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPGLRAG*EHEHMY
Trigger: GTACATGTGTTCATGTTCCCAGCCAGCTCTGAGACC...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 90 bp TCACACAGTAAGAAACAGGGTCCAGGGCTAAACGGGTGCACTCTCTaGCTGCTGGTATCCCCCTTGGTGAACAGTCCTACAAGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: SHSKKQGPGLNGCTL*LLVSPLVNSPTSSL
Trigger: CAGGCTGCTTGTAGGACTGTTCACCAAGGGGGATACCAGCAGCAAGAGAGTGCACCCGTTTAGCCCTGGACCCTGTTTCTTACTGTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 90 bp CTCCATCTCTCTGTAATGCTTTCACCCCTAGCAAGGGAGTGGGGCTaGGTTCAGAGGACCCTTGTGGAAGGGCCCAGATTTGACTCAGAG +
Preference number: 2 (lower is better)
Translates to: LHLSVMLSPLAREWG*VQRTLVEGPRFDSE
Trigger: CTCTGAGTCAAATCTGGGCCCTTCCACAAGGGTCCTCTGAACCAAGCCCCACTCCCTTGCTAGGGGTGAAAGCATTACAGAGAGATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTGGTGGCCAACTGAGATaGTGTTCCAGCACAGGCCTG +
Preference number: 2 (lower is better)
Translates to: NIRTMETSASSLALMCALGGQLR*CSSTGL
Trigger: CAGGCCTGTGCTGGAACATCATCTCAGTTGGCCACC...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTAGGTCTGCATGGCCCTaGGGGCTCTTCCTACCTAGA +
Preference number: 2 (lower is better)
Translates to: NIRTMETSASSLALMCALRSAWP*GLFLPR
Trigger: TCTAGGTAGGAAGAGCCCGCAGGGCCATGCAGACCT...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTGCTGGGCATGAGGTCTaGATGGCCCTGCGGGCTCTT +
Preference number: 2 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSAGHEV*MALRAL
Trigger: AAGAGCCCGCAGGGCCATGCAGACCTCATGCCCAGC...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTGCATGCCATGCACACACACAAGGGGCAAGGTCTaGTGGAGTGGTGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: QIFASSPDYLHTCMPCTHTRGKV*WSGGAG
Trigger: CCCCGCCCCACCACTCCAGCAGACCTTGCCCCTTGT...GTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCTCTCCACCTCCTGCATaGCCATTTTCCCCAAGCCTG +
Preference number: 2 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFSPPPA*PFSPSL
Trigger: CAGGCTTGGGGAAAATGGCCATGCAGGAGGTGGAGA...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp GAGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAGAACACTTACCCCAATCAGTATGTTCTaGGAGGGGAGGGAGACAGAC +
Preference number: 2 (lower is better)
Translates to: ETKCHPTTRASCFMRTLTPISMF*EGRETD
Trigger: GTCTGTCTCCCTCCCCTCTCAGAACATACTGATTGG...GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp TGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCAATCCCAGGGGGAAGATaGCAGACCTCTTTGTACCAA +
Preference number: 2 (lower is better)
Translates to: WIMQALGNCCPWLLGEEPIPGGR*QTSLYQ
Trigger: TTGGTACAAAGAGGTCTGTCATCTTCCCCCTGGGAT...TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp GCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTGGCTGTGCCCATTGTCTCTGGGTTCTaGGTCAACCCTCCTTCGAGA +
Preference number: 2 (lower is better)
Translates to: AEPKSHYTLHQHSELAVPIVSGF*VNPPSR
Trigger: TCTCGAAGGAGGGTTGACTCAGAACCCAGAGACAAT...GGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp GCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTGGCTGTGCCCCCCTCTCAGAGGAAGTaGGGGGTTTTGTATTGTCTC +
Preference number: 2 (lower is better)
Translates to: AEPKSHYTLHQHSELAVPPSQRK*GVLYCL
Trigger: GAGACAATACAAAACCCCTCACTTCCTCTGAGAGGG...GGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp CTACAAGGGAACATCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTTGAGGAGGAGTGGTGTAACCTaGGCTCCGGCCCTGTGGAGA +
Preference number: 2 (lower is better)
Translates to: LQGNIFATQRQYSFAVLRRSGVT*APALWR
Trigger: TCTCCACAGGGCCGGAGCTCAGGTTACACCACTCCT...CCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAACTGCCTGAGACCAAATaGCATCCCACGACAAGGGCC +
Preference number: 2 (lower is better)
Translates to: QSYKQPADSSPYISCKDELPETK*HPTTRA
Trigger: GGCCCTTGTCGTGGGATGGCATTTGGTCTCAGGCAG...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATTCAGCTTGCAGAAGTaGTGGCAGGTATCTCTTCAA +
Preference number: 2 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPFSLQK*WQVSLQ
Trigger: TTGAAGAGATACCTGCCAGCACTTCTGCAAGCTGAA...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp TGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCAACAAGTCTGTCAAGGTaGTCCTTCCGTCTCTTCCTG +
Preference number: 2 (lower is better)
Translates to: WIMQALGNCCPWLLGEEPTSLSR*SFRLFL
Trigger: CAGGAAGAGACGGAAGGAGCACCTTGACAGACTTGT...TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp TACAACACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCTGTCCCAGTGCTAGCTaGACTTGGGTCAGTCTCAGC +
Preference number: 2 (lower is better)
Translates to: YNTDNIRTMETSASSLALCPSAS*TWVSLS
Trigger: GCTGAGACTGACCCAAGTGCAGCTAGCACTGGGACA...GAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTGTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp ACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTCTCCACCTCCTGCATaGCCATTTTCCCCAAGCCTG +
Preference number: 2 (lower is better)
Translates to: TRADAISCPSKWGQRVNVSPPPA*PFSPSL
Trigger: CAGGCTTGGGGAAAATGGCCATGCAGGAGGTGGAGA...CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGTCTTGCCCTTCAAAGTaGGGCCAAAGGGTAAATGTG +
Preference number: 2 (lower is better)
Translates to: SRWIMQALGNCCPWLLGESCPSK*GQRVNV
Trigger: CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGA...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp GCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTGGCTGTGCCCACATTGCATATGCACTaGGCCTCAGCAGATCCTTCC +
Preference number: 2 (lower is better)
Translates to: AEPKSHYTLHQHSELAVPTLHMH*ASADPS
Trigger: GGAAGGATCTGCTGAGGCCCAGTGCATATGCAATGT...GGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 90 bp GAGCTGTCTGTTTTTACACGCGGCCACTTGTTTAGCCAGCCTGGTTaGGTGTTTCTGGATGCTGAGCCAAAAAGCCACTACACCCTCCAC +
Preference number: 2 (lower is better)
Translates to: ELSVFTRGHLFSQPG*VFLDAEPKSHYTLH
Trigger: GTGGAGGGTGTAGTGGCTTTTTGGCTCAGCATCCAGAAACACCAAACCAGGCTGGCTAAACAAGTGGCCGCGTGTAAAAACAGACAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp TGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCAGTGCACCCCTTCAGTTaGGGGAGAAAGATTTCTTCT +
Preference number: 2 (lower is better)
Translates to: WIMQALGNCCPWLLGEEPVHPFS*GRKISS
Trigger: AGAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCAC...TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCAAAGGACAAACGTAAGTaGGTTTTTAAAGAGGTGGCG +
Preference number: 2 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPKDKRK*VFKEVA
Trigger: CGCCACCTCTTTAAAAACTCACTTACGTTTGTCCTT...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp TACAACACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCCTCCTTGGAAGGTGCTaGAGACAAGGATCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: YNTDNIRTMETSASSLALLLGRC*RQGSVS
Trigger: GGACACAGATCCTTGTCTTCAGCACCTTCCAAGGAG...GAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTGTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAACACCCAGTGTGGTGCTaGCTGAGACCAAATGCCATC +
Preference number: 2 (lower is better)
Translates to: QSYKQPADSSPYISCKDEHPVWC*LRPNAI
Trigger: GATGGCATTTGGTCTCAGGCAGCACCACACTGGGTG...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGCATAACATCCACCTCTaGGTTTGCTCGTGTGTTTCA +
Preference number: 2 (lower is better)
Translates to: SRWIMQALGNCCPWLLGEHNIHL*VCSCVS
Trigger: TGAAACACACGAGCAAACCCAGAGGTGGATGTTATG...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTGGCATGAGGTCTGCATaGCCCTGCGGGCTCTTCCTA +
Preference number: 2 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLGMRSA*PCGLFL
Trigger: TAGGAAGAGCCCGCAGGGCCATGCAGACCTCATGCC...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp GCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTGGCTGTGCCCTTTTCCCCCTTCACCTaGAGTAAGACACGACTTCCA +
Preference number: 2 (lower is better)
Translates to: AEPKSHYTLHQHSELAVPFSPFT*SKTRLP
Trigger: TGGAAGTCGTGTCTTACTCCAGGTGAAGGGGGAAAA...GGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGCCTCTAGAACTGCCCTaGTTTCCTCTTGCCCTTTTC +
Preference number: 2 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVPLELP*FPLALF
Trigger: GAAAAGGGCAAGAGGAAACCAGGGCAGTTCTAGAGG...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp TACAACACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCAGTGCTAGCTGCACTTaGGTCAGTCTCAGCACAAGC +
Preference number: 2 (lower is better)
Translates to: YNTDNIRTMETSASSLALSASCT*VSLSTS
Trigger: GCTTGTGCTGAGACTGACCCAAGTGCAGCTAGCACT...GAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTGTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTAGCCTGCCAGGAAGGTaGCCAACTGAGATGATGTTC +
Preference number: 2 (lower is better)
Translates to: NIRTMETSASSLALMCALSLPGR*PTEMMF
Trigger: GAACATCATCTCAGTTGGCCACCTTCCTGGCAGGCT...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 90 bp GACTCACAGCATTTGGCCCTCTCAGAGGAAGTGAGGGGTTTTGTATaGTCTCTGGGTTCTGAGTCAACCCTCCTTCGAGAAGACTCACAC +
Preference number: 2 (lower is better)
Translates to: DSQHLALSEEVRGFV*SLGSESTLLREDSH
Trigger: GTGTGAGTCTTCTCGAAGGAGGGTTGACTCAGAACCCAGAGACAATACAAAACCCCTCACTTCCTCTGAGAGGGCCAAATGCTGTGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 90 bp GGGCCCAGATTTGACTCAGAGCTGTCTGTTTTTACACGCGGCCACTaGTTTAGCCAGCCTGGTTTGGTGTTTCTGGATGCTGAGCCAAAA +
Preference number: 2 (lower is better)
Translates to: GPRFDSELSVFTRGH*FSQPGLVFLDAEPK
Trigger: TTTTGGCTCAGCATCCAGAAACACCAAACCAGGCTGGCTAAACAAGTGGCCGCGTGTAAAAACAGACAGCTCTGAGTCAAATCTGGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp GCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAGAGAGAGTGTGCAGGTTCTGCTaGACACGCACCTCCCAATCA +
Preference number: 2 (lower is better)
Translates to: AGRYLFNKTWKSFTSGERVCRFC*TRTSQS
Trigger: TGATTGGGAGGTGCGTGTTCAGCAGAACCTGCACAC...TCTCTCTCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp GCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAATCCACCTCTGGGTTTaGTCGTGTGTTTCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: AHLSHQSRRHFLPFKVGPIHLWV*SCVSEN
Trigger: GTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT...TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CTTGCCAAAAGTATATACACTTCCTTCCCTTCACCTGGAATAAAGCAGGACTTCGCTGGGCATGAGGTCTaGATGGCCCTGCGGGCTCTT +
Preference number: 2 (lower is better)
Translates to: LAKSIYTSFPSPGIKQDFAGHEV*MALRAL
Trigger: AAGAGCCCGCAGGGCCATGCAGACCTCATGCCCAGC...GAAGTCCTGCTTTATTCCAGGTGAAGGGAAGGAAGTGTATATACTTTTGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTGCATGCCATGCACACACACGCACCCAGTGTGGTaGTGCCTGAGACCAAATGCC +
Preference number: 2 (lower is better)
Translates to: QIFASSPDYLHTCMPCTHTHPVW*CLRPNA
Trigger: GGCATTTGGTCTCAGGCAGCACCACACTGGGTGCGT...GTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGTCTCCACCTCCTGCATaGCCATTTTCCCCAAGCCTG +
Preference number: 2 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWSPPPA*PFSPSL
Trigger: CAGGCTTGGGGAAAATGGCCATGCAGGAGGTGGAGA...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTGGGGGAGGGGGCCGGTaGTGTAATACTACCTGTTCT +
Preference number: 2 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLGGGGR*CNTTCS
Trigger: AGAACAGGTAGTATTACACCACCGGCCCCCTCCCCC...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp GGGGGCTTCCTGTGTAAGAAACAGGCCATAGATCATTTCACACCAGGCACATACGAGAGAAGCAGTTGCTaGGTCTCACTCAGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: GGFLCKKQAIDHFTPGTYERSSC*VSLRFP
Trigger: GGGAAACCTGAGTGAGACCCAGCAACTGCTTCTCTC...GTATGTGCCTGGTGTGAAATGATCTATGGCCTGTTTCTTACACAGGAAGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp GCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTGGCTGTGCCCGTTTTGTATTGTCTCTaGGTTCTGAGTCAACCCTCC +
Preference number: 2 (lower is better)
Translates to: AEPKSHYTLHQHSELAVPVLYCL*VLSQPS
Trigger: GGAGGGTTGACTCAGAACCCAGAGACAATACAAAAC...GGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp GCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTGGCTGTGCCCACTTCCATAGATCACTaGATCACCAGAATCAGGCTG +
Preference number: 2 (lower is better)
Translates to: AEPKSHYTLHQHSELAVPTSIDH*ITRIRL
Trigger: CAGCCTGATTCTGGTGATCCAGTGATCTATGGAAGT...GGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTTTTCCCCCTTCACCTaGAGTAAGACACGACTTCCA +
Preference number: 2 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVFSPFT*SKTRLP
Trigger: TGGAAGTCGTGTCTTACTCCAGGTGAAGGGGGAAAA...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 90 bp ACTACCTGTTCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTaGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACA +
Preference number: 2 (lower is better)
Translates to: TTCSAHLSHQSRRHF*PFKVGPKGKCVWQT
Trigger: TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGAACAGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp GCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTGGCTGTGCCCAAGGACAAACGTAAGTaGGTTTTTAAAGAGGTGGCG +
Preference number: 2 (lower is better)
Translates to: AEPKSHYTLHQHSELAVPKDKRK*VFKEVA
Trigger: CGCCACCTCTTTAAAAACTCACTTACGTTTGTCCTT...GGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp TACAACACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCAGTAGCCTTCAGGTCTaGGCAATGAGGGTTCTAAGA +
Preference number: 2 (lower is better)
Translates to: YNTDNIRTMETSASSLALSSLQV*AMRVLR
Trigger: TCTTAGAACCCTCATTGCTCAGACCTGAAGGCTACT...GAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTAGTAGCCTTCAGGTCTaGGCAATGAGGGTTCTAAGA +
Preference number: 2 (lower is better)
Translates to: NIRTMETSASSLALMCALSSLQV*AMRVLR
Trigger: TCTTAGAACCCTCATTGCTCAGACCTGAAGGCTACT...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTCACACGCGGTCGTGTTaGCTAGGTGAACGCCACTTA +
Preference number: 2 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLHTRSC*LGERHL
Trigger: TAAGTGGCGTTCACCTAGTCAACACGACCGCGTGTG...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp TTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTATCCACCTCTGGGTTTaGTCGTGTGTTTCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: LSHQSRRHFLPFKVGPKGIHLWV*SCVSEN
Trigger: GTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT...ACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTGCATGCCATGCACACACGACAATGGAGACGTCTaGCAGCAGCCTTGCCCTCAT +
Preference number: 2 (lower is better)
Translates to: QIFASSPDYLHTCMPCTHDNGDV*QQPCPH
Trigger: ATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTC...GTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCTCTCCACCTCCTGCATaGCCATTTTCCCCAAGCCTG +
Preference number: 2 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFSPPPA*PFSPSL
Trigger: CAGGCTTGGGGAAAATGGCCATGCAGGAGGTGGAGA...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp TACAACACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCAGGGGTGTTTCTGGTTaGACTGTGACATCCCAGAAA +
Preference number: 2 (lower is better)
Translates to: YNTDNIRTMETSASSLALRGVSG*TVTSQK
Trigger: TTTCTGGGATGTCACAGTCCAACCAGAAACACCCCT...GAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTGTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp CAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTGCATGCCATGCACACACGAGACGCACCCAGTGTaGTGCTGCCTGAGACCAAAT +
Preference number: 2 (lower is better)
Translates to: QIFASSPDYLHTCMPCTHETHPV*CCLRPN
Trigger: ATTTGGTCTCAGGCAGCACCACACTGGGTGCGTCTC...GTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGAGCTTGCAGAAGTGCTaGCAGGTATCTCTTCAACAA +
Preference number: 2 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVSLQKC*QVSLQQ
Trigger: TTGTTGAAGAGATACCTGCCAGCACTTCTGCAAGCT...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTGGAATATTTGGTTCCTaGGTCTCAGAGCTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSGIFGS*VSELAG
Trigger: CCCAGCCAGCTCTGAGACCCAGGAACCAAATATTCC...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGATAGACACTATACATTaGATATGCACTGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVIDTIH*ICTGPQ
Trigger: CTGAGGCCCAGTGCATATGCAATGTATAGTGTCTAT...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CTACAAGGGAACATCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTTGAGGACGACAAGGGCCTCCTaGTTCATGAGAACACTTACC +
Preference number: 2 (lower is better)
Translates to: LQGNIFATQRQYSFAVLRTTRAS*FMRTLT
Trigger: GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGT...CCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCATGACTGCTCTAGCACTGTCTACTGTGTTCTaGAAAAGGCTGGGAAAAGAA +
Preference number: 2 (lower is better)
Translates to: PRKLLPMAFRRGTMTALALSTVF*KRLGKE
Trigger: TTCTTTTCCCAGCCTTTTGCAGAACACAGTAGACAG...TGCTAGAGCAGTCATGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp GTCACCGGTGATCCTCTACCGGGAGCTAGATCATCTTATATCCCAGGGGGAAGAGAGTTTTTAAAGAGGTaGCGCTCATCGATTTTTCCC +
Preference number: 2 (lower is better)
Translates to: VTGDPLPGARSSYIPGGREFLKR*RSSIFP
Trigger: GGGAAAAATCGATGAGCGCCACCTCTTTAAAAACTC...TCTTCCCCCTGGGATATAAGATGATCTAGCTCCCGGTAGAGGATCACCGGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp AGAAGTGCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAGCTCTTACAGATGACTaGAGACGCACCCAGTGTGGT +
Preference number: 2 (lower is better)
Translates to: RSAGRYLFNKTWKSFTSGALTDD*RRTQCG
Trigger: ACCACACTGGGTGCGTCTCCAGTCATCTGTAAGAGC...TCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGCTCTTCAACAAAACCTaGAAAAGCTTCACCTCAGGA +
Preference number: 2 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVLFNKT*KSFTSG
Trigger: TCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAG...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTACTCTAAGGTGGGAATaGCACCATTTCCTAACCTCT +
Preference number: 2 (lower is better)
Translates to: NIRTMETSASSLALMCALTLRWE*HHFLTS
Trigger: AGAGGTTAGGAAATGGTGCCATTCCCACCTTAGAGT...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTTGTAGCACTCTAAGGTaGGAATGGCACCATTTCCTA +
Preference number: 2 (lower is better)
Translates to: NIRTMETSASSLALMCALCSTLR*EWHHFL
Trigger: TAGGAAATGGTGCCATTCCCACCTTAGAGTGCTACA...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp GCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTGGCTGTGCCCTTGGTTCTGGTAAAATaGGGACACGTTTATTTTGGG +
Preference number: 2 (lower is better)
Translates to: AEPKSHYTLHQHSELAVPLVLVK*GHVYFG
Trigger: CCCAAAATAAACGTGTCCCCATTTTACCAGAACCAA...GGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp GCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAGAGAGAGTGCACCCCTTCAGTTaGGGGAGAAAGATTTCTTCT +
Preference number: 2 (lower is better)
Translates to: AGRYLFNKTWKSFTSGERVHPFS*GRKISS
Trigger: AGAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCAC...TCTCTCTCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp CTACAAGGGAACATCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTTGAGGTTTCTGGTTGGACTGTaGCATCCCAGAAAGCTGTCA +
Preference number: 2 (lower is better)
Translates to: LQGNIFATQRQYSFAVLRFLVGL*HPRKLS
Trigger: TGACAGCTTTCTGGGATGTCACAGTCCAACCAGAAA...CCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp CTTGCCAAAAGTATATACACTTCCTTCCCTTCACCTGGAATAAAGCAGGACTTCGTGTGCAGGTTCTGCTaGACACGCACCTCCCAATCA +
Preference number: 2 (lower is better)
Translates to: LAKSIYTSFPSPGIKQDFVCRFC*TRTSQS
Trigger: TGATTGGGAGGTGCGTGTTCAGCAGAACCTGCACAC...GAAGTCCTGCTTTATTCCAGGTGAAGGGAAGGAAGTGTATATACTTTTGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTCCCTCTCAGAGGAAGTaGGGGGTTTTGTATTGTCTC +
Preference number: 2 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLPSQRK*GVLYCL
Trigger: GAGACAATACAAAACCCCTCACTTCCTCTGAGAGGG...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACATCCACCTCTGGGTTTaGTCGTGTGTTTCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHIHLWV*SCVSEN
Trigger: GTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTCTGTCTACTGTGTTCTaGAAAAGGCTGGGAAAAGAA +
Preference number: 2 (lower is better)
Translates to: NIRTMETSASSLALMCALLSTVF*KRLGKE
Trigger: TTCTTTTCCCAGCCTTTTGCAGAACACAGTAGACAG...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp CTCCTGCTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTAATGTGGGGGGAGGGGGCCGGTaGTGTAATACTACCTGTTCT +
Preference number: 2 (lower is better)
Translates to: LLLHENTYRHSNLFEINVGGGGR*CNTTCS
Trigger: AGAACAGGTAGTATTACACCACCGGCCCCCTCCCCC...CACATTAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTTTAGCCAGCCTGGTTTaGTGTTTCTGGATGCTGAGC +
Preference number: 2 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLLASLV*CFWMLS
Trigger: GCTCAGCATCCAGAAACACCAAACCAGGCTGGCTAA...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTaGAGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGT +
Preference number: 2 (lower is better)
Translates to: GLLVCFRKQVGAPLQ*REKDFFFLDNNGLS
Trigger: ACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAAGTTTCCCAGTCAATGTaGCAGCCCAGGATTTTTAAA +
Preference number: 2 (lower is better)
Translates to: QSYKQPADSSPYISCKDEVSQSM*QPRIFK
Trigger: TTTAAAAATCCTGGGCTGGCACATTGACTGGGAAAC...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTGCCCTGGTTTCCTCTTaGCCTTTTCAACTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLALVSS*PFQLSF
Trigger: AAAGGACAGTTGAAAAGGGCAAGAGGAAACCAGGGC...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTGCATGCCATGCACACACAGTCTCAGCACAAGCTaGAAGGTGAAGATGTCATGG +
Preference number: 2 (lower is better)
Translates to: QIFASSPDYLHTCMPCTHSLSTS*KVKMSW
Trigger: CCATGACATCTTCACCTTGCAGCTTGTGCTGAGACT...GTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTCATACGTGCATGCCATaGACACACTACTTCAAACCT +
Preference number: 2 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSHTCMP*THYFKP
Trigger: AGGTTTGAAGTAGTGTGTGCATGGCATGCACGTATG...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp AGAAGTGCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAAGGGGTGTTTCTGGTTaGACTGTGACATCCCAGAAA +
Preference number: 2 (lower is better)
Translates to: RSAGRYLFNKTWKSFTSGRGVSG*TVTSQK
Trigger: TTTCTGGGATGTCACAGTCCAACCAGAAACACCCCT...TCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGCACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp CATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTGGCCGAATAGTGAAGGTAATGGCATGAGGTCTGCATaGCCCTGCGGGCTCTTCCTA +
Preference number: 2 (lower is better)
Translates to: HAFYKVIKRSGWPNSEGNGMRSA*PCGLFL
Trigger: TAGGAAGAGCCCGCAGGGCCATGCAGACCTCATGCC...ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp GGGGGCTTCCTGTGTAAGAAACAGGCCATAGATCATTTCACACCAGGCACATACTTCATTTGCCTATGTTaGCCTGAGATGTTTCCCTTC +
Preference number: 2 (lower is better)
Translates to: GGFLCKKQAIDHFTPGTYFICLC*PEMFPF
Trigger: GAAGGGAAACATCTCAGGCCAACATAGGCAAATGAA...GTATGTGCCTGGTGTGAAATGATCTATGGCCTGTTTCTTACACAGGAAGCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTCTCTTCAACAAAACCTaGAAAAGCTTCACCTCAGGA +
Preference number: 2 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSLFNKT*KSFTSG
Trigger: TCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAG...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTTCTAAGTTACTAAATTaGGAAGAAGCGAGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSSKLLN*EEARWG
Trigger: TCCCCACCTCGCTTCTTCCCAATTTAGTAACTTAGA...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTATAGCCCTTTTCATTTaGCTATGTTGGCCTGAGATG +
Preference number: 2 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLIALFI*LCWPEM
Trigger: CATCTCAGGCCAACATAGGCAAATGAAAAGGGCTAT...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTTGTTCTGCAAAAGGCTaGGAAAAGAAGAGGACTCTT +
Preference number: 2 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLCSAKG*EKKRTL
Trigger: AAGAGTCCTCTTCTTTTCCCAGCCTTTTGCAGAACA...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp CATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTGGCCGAATAGTGAAGGTAATGTAAGGACGAAGGAGTaGTGTAACCTGAGCTCCGGC +
Preference number: 2 (lower is better)
Translates to: HAFYKVIKRSGWPNSEGNVRTKE*CNLSSG
Trigger: GCCGGAGCTCAGGTTACACCACTCCTTCGTCCTTAC...ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp CTACAAGGGAACATCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTTGAGGTTGGTTCTGGTAAAATaGGGACACGTTTATTTTGGG +
Preference number: 2 (lower is better)
Translates to: LQGNIFATQRQYSFAVLRLVLVK*GHVYFG
Trigger: CCCAAAATAAACGTGTCCCCATTTTACCAGAACCAA...CCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 90 bp CTTCAGTTGAGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTaGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTC +
Preference number: 2 (lower is better)
Translates to: LQLREKDFFFLDNNG*SRVPIFSTSCMAIF
Trigger: GAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCTCAACTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR CAA 90 bp CTGAGATGTTTCCCTTCTGGTGAATTTGCTTCTGTAAATTTCAGCTaGCAGAAGTGCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAG +
Preference number: 2 (lower is better)
Translates to: LRCFPSGEFASVNFS*QKCWQVSLQQNLEK
Trigger: CTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGCACTTCTGCAAGCTGAAATTTACAGAAGCAAATTCACCAGAAGGGAAACATCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 90 bp AGGAAGCCTCTCCATCTCCCTCTAACATCAGAAATCTCATCACATTaGAGCTGTATGACTTGCCAAAAGTATATACACTTCCTTCCCTTC +
Preference number: 2 (lower is better)
Translates to: RKPLHLPLTSEISSH*SCMTCQKYIHFLPF
Trigger: GAAGGGAAGGAAGTGTATATACTTTTGGCAAGTCATACAGCTCAAATGTGATGAGATTTCTGATGTTAGAGGGAGATGGAGAGGCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp CTTGCCAAAAGTATATACACTTCCTTCCCTTCACCTGGAATAAAGCAGGACTTCAAGGACAAACGTAAGTaGGTTTTTAAAGAGGTGGCG +
Preference number: 2 (lower is better)
Translates to: LAKSIYTSFPSPGIKQDFKDKRK*VFKEVA
Trigger: CGCCACCTCTTTAAAAACTCACTTACGTTTGTCCTT...GAAGTCCTGCTTTATTCCAGGTGAAGGGAAGGAAGTGTATATACTTTTGGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp CATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTGGCCGAATAGTGAAGGTAATATTGTCTCTGGGTTCTaGGTCAACCCTCCTTCGAGA +
Preference number: 2 (lower is better)
Translates to: HAFYKVIKRSGWPNSEGNIVSGF*VNPPSR
Trigger: TCTCGAAGGAGGGTTGACTCAGAACCCAGAGACAAT...ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR TCA 90 bp CATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTGGCCGAATAGTGAAGGTAATAGCTGGCTGGGAACATaGACACATGTACAGGAGGTT +
Preference number: 2 (lower is better)
Translates to: HAFYKVIKRSGWPNSEGNSWLGT*THVQEV
Trigger: AACCTCCTGTACATGTGTTCATGTTCCCAGCCAGCT...ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTGGCCGAATAGTGAAGGTAATACGACAAGGGCCTCCTaGTTCATGAGAACACTTACC +
Preference number: 2 (lower is better)
Translates to: HAFYKVIKRSGWPNSEGNTTRAS*FMRTLT
Trigger: GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGT...ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CTACAAGGGAACATCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTTGAGGAATGAAACAGATCTTTaGTTCTTCCCCAGATTACTT +
Preference number: 2 (lower is better)
Translates to: LQGNIFATQRQYSFAVLRNETDL*FFPRLL
Trigger: AAGTAATCTGGGGAAGAAGCAAAGATCTGTTTCATT...CCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CCA 90 bp CATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTGGCCGAATAGTGAAGGTAATGGAAACTGCTGCCCATaGCTTTTAGGAGAGGAACCA +
Preference number: 2 (lower is better)
Translates to: HAFYKVIKRSGWPNSEGNGNCCP*LLGEEP
Trigger: TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCC...ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTGGCCGAATAGTGAAGGTAATTTCAGCTTGCAGAAGTaGTGGCAGGTATCTCTTCAA +
Preference number: 2 (lower is better)
Translates to: HAFYKVIKRSGWPNSEGNFSLQK*WQVSLQ
Trigger: TTGAAGAGATACCTGCCAGCACTTCTGCAAGCTGAA...ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTGGCCGAATAGTGAAGGTAATCCTCCCCATGGGAGATaGTTCATCATCATTTTGGAT +
Preference number: 2 (lower is better)
Translates to: HAFYKVIKRSGWPNSEGNPPHGR*FIIILD
Trigger: ATCCAAAATGATGATGAAGCATCTCCCATGGGGAGG...ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR GCA 90 bp CATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTGGCCGAATAGTGAAGGTAATATAGACACTATACATTaGATATGCACTGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: HAFYKVIKRSGWPNSEGNIDTIH*ICTGPQ
Trigger: CTGAGGCCCAGTGCATATGCAATGTATAGTGTCTAT...ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 72 bp GTGCCACAGGAAGCCCTCATAGGATCGTGCAGCAGGTaGATCATGCAGGCCCTCGGAAACTGCTGCCCATGG +
Preference number: 3 (lower is better)
Translates to: VPQEALIGSCSR*IMQALGNCCPW
Trigger: CCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAGGGCTTCCTGTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 72 bp GAAGAGGCACTGTCACAAGCGTCAGAGAGCTGGGCATaGGGTCTGCATGGCCCTGCGGGCTCTTCCTACCTA +
Preference number: 3 (lower is better)
Translates to: EEALSQASESWA*GLHGPAGSSYL
Trigger: TAGGTAGGAAGAGCCCGCAGGGCCATGCAGACCTCATGCCCAGCTCTCTGACGCTTGTGACAGTGCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 72 bp ACAGATGACTGGAGACGCACCCAGTGTGGTGCTGCCTaGGACCAAATGCCATCCCACGACAAGGGCCTCCTG +
Preference number: 3 (lower is better)
Translates to: TDDWRRTQCGAA*DQMPSHDKGLL
Trigger: CAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTCAGGCAGCACCACACTGGGTGCGTCTCCAGTCATCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 72 bp GGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTaGCTAGGTGAACGCCACTTAAAACTGCTATCCAGT +
Preference number: 3 (lower is better)
Translates to: GSPGQGQHTRSC*LGERHLKLLSS
Trigger: ACTGGATAGCAGTTTTAAGTGGCGTTCACCTAGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp TACAACACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCGTGTCCTCAGGAGGCTaGGGGAGCAGCTGTCCTACC +
Preference number: 3 (lower is better)
Translates to: YNTDNIRTMETSASSLALVSSGG*GSSCPT
Trigger: GGTAGGACAGCTGCTCCCCAAGCCTCCTGAGGACAC...GAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTGTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp GCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTGGCTGTGCCCAACGGGTGCACTCTCTaGCTGCTGGTATCCCCCTTG +
Preference number: 3 (lower is better)
Translates to: AEPKSHYTLHQHSELAVPNGCTL*LLVSPL
Trigger: CAAGGGGGATACCAGCAGCAAGAGAGTGCACCCGTT...GGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCAGGTGCACCCCTTCAGTaGAGGGAGAAAGATTTCTTC +
Preference number: 3 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPGAPLQ*REKDFF
Trigger: GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACC...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp AGCTGCAAGGTGAAGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCAATAGACACTATACATaGCATATGCACTGGGCCTCA +
Preference number: 3 (lower is better)
Translates to: SCKVKMSWRGAQGRGNTRNRHYT*HMHWAS
Trigger: TGAGGCCCAGTGCATATGCAATGTATAGTGTCTATT...GCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCTTCACCTTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 72 bp AGGGCAGGGGCAACACACGCGGTCGTGTTGACTAGGTaGACGCCACTTAAAACTGCTATCCAGTCACCAGCA +
Preference number: 3 (lower is better)
Translates to: RAGATHAVVLTR*TPLKTAIQSPA
Trigger: TGCTGGTGACTGGATAGCAGTTTTAAGTGGCGTTCACCTAGTCAACACGACCGCGTGTGTTGCCCCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 72 bp ACGGGTGCACTCTCTTGCTGCTGGTATCCCCCTTGGTaGACAGTCCTACAAGCAGCCTGCAGATTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: TGALSCCWYPPW*TVLQAACRFFS
Trigger: GGAGAAGAATCTGCAGGCTGCTTGTAGGACTGTTCACCAAGGGGGATACCAGCAGCAAGAGAGTGCACCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 72 bp GCGGCCACTTGTTTAGCCAGCCTGGTTTGGTGTTTCTaGATGCTGAGCCAAAAAGCCACTACACCCTCCACC +
Preference number: 3 (lower is better)
Translates to: AATCLASLVWCF*MLSQKATTPST
Trigger: GGTGGAGGGTGTAGTGGCTTTTTGGCTCAGCATCCAGAAACACCAAACCAGGCTGGCTAAACAAGTGGCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCAGTGAGGGGTTTTGTATaGTCTCTGGGTTCTGAGTCA +
Preference number: 3 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPVRGFV*SLGSES
Trigger: TGACTCAGAACCCAGAGACAATACAAAACCCCTCAC...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 72 bp GTTCTGCTGAACACGCACCTCCCAATCAGTATGTTCTaGGAGGGGAGGGAGACAGACAAAACTCCCTCCCTC +
Preference number: 3 (lower is better)
Translates to: VLLNTHLPISMF*EGRETDKTPSL
Trigger: GAGGGAGGGAGTTTTGTCTGTCTCCCTCCCCTCTCAGAACATACTGATTGGGAGGTGCGTGTTCAGCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 72 bp CCGTATGCATCAGAATCTGGAGCAAGCTCTTACAGATaGCTGGAGACGCACCCAGTGTGGTGCTGCCTGAGA +
Preference number: 3 (lower is better)
Translates to: PYASESGASSYR*LETHPVWCCLR
Trigger: TCTCAGGCAGCACCACACTGGGTGCGTCTCCAGTCATCTGTAAGAGCTTGCTCCAGATTCTGATGCATACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 72 bp TCACACAGTAAGAAACAGGGTCCAGGGCTAAACGGGTaGACTCTCTTGCTGCTGGTATCCCCCTTGGTGAAC +
Preference number: 3 (lower is better)
Translates to: SHSKKQGPGLNG*TLLLLVSPLVN
Trigger: GTTCACCAAGGGGGATACCAGCAGCAAGAGAGTGCACCCGTTTAGCCCTGGACCCTGTTTCTTACTGTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 72 bp GCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTaGGGCCAAAGGGTAAATGTGTTTGGCAGACACAGC +
Preference number: 3 (lower is better)
Translates to: ATRADAISCPSK*GQRVNVFGRHS
Trigger: GCTGTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR CCA 72 bp CAAAAAGCCACTACACCCTCCACCAACATTCAGAACTaGCTGTGCCCCAACTCTTCCAGCCACTGTCCTTGG +
Preference number: 3 (lower is better)
Translates to: QKATTPSTNIQN*LCPNSSSHCPW
Trigger: CCAAGGACAGTGGCTGGAAGAGTTGGGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp GCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAGGTGCACCCCTTCAGTaGAGGGAGAAAGATTTCTTC +
Preference number: 3 (lower is better)
Translates to: AHLSHQSRRHFLPFKVGPGAPLQ*REKDFF
Trigger: GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACC...TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp GAGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAGAACACTTACCGAGGGGTGTTTCTGGTaGGACTGTGACATCCCAGAA +
Preference number: 3 (lower is better)
Translates to: ETKCHPTTRASCFMRTLTEGCFW*DCDIPE
Trigger: TTCTGGGATGTCACAGTCCAACCAGAAACACCCCTC...GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp GTCACCGGTGATCCTCTACCGGGAGCTAGATCATCTTATATCCCAGGGGGAAGAGAGGGGTGTTTCTGGTaGGACTGTGACATCCCAGAA +
Preference number: 3 (lower is better)
Translates to: VTGDPLPGARSSYIPGGREGCFW*DCDIPE
Trigger: TTCTGGGATGTCACAGTCCAACCAGAAACACCCCTC...TCTTCCCCCTGGGATATAAGATGATCTAGCTCCCGGTAGAGGATCACCGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGCTGGGAGCAGTACTaGTTACACAATACAACTGCT +
Preference number: 3 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPCWEQY*LHNTTA
Trigger: AGCAGTTGTATTGTGTAACAAGTACTGCTCCCAGCA...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 72 bp ATGTCAGGTCTACAGCCTGCCAGGAAGGTGGCCAACTaGGATGATGTTCCAGCACAGGCCTGTAATCCAAAC +
Preference number: 3 (lower is better)
Translates to: MSGLQPARKVAN*DDVPAQACNPN
Trigger: GTTTGGATTACAGGCCTGTGCTGGAACATCATCTCAGTTGGCCACCTTCCTGGCAGGCTGTAGACCTGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 72 bp GCAGACACAGCTGTTCATAACATCCACCTCTGGGTTTaGTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCC +
Preference number: 3 (lower is better)
Translates to: ADTAVHNIHLWV*SCVSENRWVHP
Trigger: GGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR GCA 72 bp ACTTCCATAGATCACTGGATCACCAGAATCAGGCTGTaGCTGAAGCTAGTTCCCAAGCACCCAGAGGGCTGT +
Preference number: 3 (lower is better)
Translates to: TSIDHWITRIRL*LKLVPKHPEGC
Trigger: ACAGCCCTCTGGGTGCTTGGGAACTAGCTTCAGGCACAGCCTGATTCTGGTGATCCAGTGATCTATGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 72 bp GAAGACAAGGATCTGTGTCCCAGTGCTAGCTGCACTTaGGTCAGTCTCAGCACAAGCTGCAAGGTGAAGATG +
Preference number: 3 (lower is better)
Translates to: EDKDLCPSASCT*VSLSTSCKVKM
Trigger: CATCTTCACCTTGCAGCTTGTGCTGAGACTGACCCAAGTGCAGCTAGCACTGGGACACAGATCCTTGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 72 bp GTCTCAAAATGTCAGGTCTACAGCCTGCCAGGAAGGTaGCCAACTGAGATGATGTTCCAGCACAGGCCTGTA +
Preference number: 3 (lower is better)
Translates to: VSKCQVYSLPGR*PTEMMFQHRPV
Trigger: TACAGGCCTGTGCTGGAACATCATCTCAGTTGGCCACCTTCCTGGCAGGCTGTAGACCTGACATTTTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp GGGGGCCGGTGGTGTAATACTACCTGTTCTGCTCACTTAAGCCACCAGAGCAGACATCCACCTCTGGGTTaGCTCGTGTGTTTCAGAAAA +
Preference number: 3 (lower is better)
Translates to: GGRWCNTTCSAHLSHQSRHPPLG*LVCFRK
Trigger: TTTTCTGAAACACACGAGCAAACCCAGAGGTGGATG...TCTGCTCTGGTGGCTTAAGTGAGCAGAACAGGTAGTATTACACCACCGGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp GGGGGCTTCCTGTGTAAGAAACAGGCCATAGATCATTTCACACCAGGCACATACAGCAGACGCCATTTCTaGCCCTTCAAAGTGGGGCCA +
Preference number: 3 (lower is better)
Translates to: GGFLCKKQAIDHFTPGTYSRRHF*PFKVGP
Trigger: TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCT...GTATGTGCCTGGTGTGAAATGATCTATGGCCTGTTTCTTACACAGGAAGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGTCTGTAAATTTCAGCTaGCAGAAGTGCTGGCAGGTA +
Preference number: 3 (lower is better)
Translates to: SRWIMQALGNCCPWLLGESVNFS*QKCWQV
Trigger: TACCTGCCAGCACTTCTGCAAGCTGAAATTTACAGA...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGAATAGACACTATACATaGCATATGCACTGGGCCTCA +
Preference number: 3 (lower is better)
Translates to: SRWIMQALGNCCPWLLGENRHYT*HMHWAS
Trigger: TGAGGCCCAGTGCATATGCAATGTATAGTGTCTATT...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCAGAAATCTCATCACATTaGAGCTGTATGACTTGCCAA +
Preference number: 3 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPEISSH*SCMTCQ
Trigger: TTGGCAAGTCATACAGCTCAAATGTGATGAGATTTC...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 72 bp ATCGATTTTTCCCGCTGTCCTGTGTGCAGGTTCTGCTaGACACGCACCTCCCAATCAGTATGTTCTGAGAGG +
Preference number: 3 (lower is better)
Translates to: IDFSRCPVCRFC*TRTSQSVCSER
Trigger: CCTCTCAGAACATACTGATTGGGAGGTGCGTGTTCAGCAGAACCTGCACACAGGACAGCGGGAAAAATCGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 72 bp CCTGAGACCAAATGCCATCCCACGACAAGGGCCTCCTaGTTCATGAGAACACTTACCGTCATTCGAATCTCT +
Preference number: 3 (lower is better)
Translates to: PETKCHPTTRAS*FMRTLTVIRIS
Trigger: AGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 72 bp ATGATGTTCCAGCACAGGCCTGTAATCCAAACCGGCTaGGGTAGCTACCTACGTATGTGCTGGAAGCATCTA +
Preference number: 3 (lower is better)
Translates to: MMFQHRPVIQTG*GSYLRMCWKHL
Trigger: TAGATGCTTCCAGCACATACGTAGGTAGCTACCCCAGCCGGTTTGGATTACAGGCCTGTGCTGGAACATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp ACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGCATCCACCTCTGGGTTaGCTCGTGTGTTTCAGAAAA +
Preference number: 3 (lower is better)
Translates to: TRADAISCPSKWGQRVNVHPPLG*LVCFRK
Trigger: TTTTCTGAAACACACGAGCAAACCCAGAGGTGGATG...CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAATGCCCTGGTTTCCTCTaGCCCTTTTCAACTGTCCTT +
Preference number: 3 (lower is better)
Translates to: QSYKQPADSSPYISCKDECPGFL*PFSTVL
Trigger: AAGGACAGTTGAAAAGGGCAAGAGGAAACCAGGGCA...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTCTGCTGGTATCCCCCTaGGTGAACAGTCCTACAAGC +
Preference number: 3 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLLLVSP*VNSPTS
Trigger: GCTTGTAGGACTGTTCACCAAGGGGGATACCAGCAG...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 72 bp CCACACTGCAGTCCTAGACAGAGGGGTGTTTCTGGTTaGACTGTGACATCCCAGAAAGCTGTCACTCAAAAA +
Preference number: 3 (lower is better)
Translates to: PHCSPRQRGVSG*TVTSQKAVTQK
Trigger: TTTTTGAGTGACAGCTTTCTGGGATGTCACAGTCCAACCAGAAACACCCCTCTGTCTAGGACTGCAGTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 72 bp AGAGGAAGTGAGGGGTTTTGTATTGTCTCTGGGTTCTaGGTCAACCCTCCTTCGAGAAGACTCACACAAGTC +
Preference number: 3 (lower is better)
Translates to: RGSEGFCIVSGF*VNPPSRRLTQV
Trigger: GACTTGTGTGAGTCTTCTCGAAGGAGGGTTGACTCAGAACCCAGAGACAATACAAAACCCCTCACTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 72 bp TCATTTTGGATCCATGTCCTCTTGCGTACGTTTTTCTaGTTTCCCTACCCACTTGAGAAGCGGCTGATGCTC +
Preference number: 3 (lower is better)
Translates to: SFWIHVLLRTFF*FPYPLEKRLML
Trigger: GAGCATCAGCCGCTTCTCAAGTGGGTAGGGAAAGCAGAAAAACGTACGCAAGAGGACATGGATCCAAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 72 bp TTTTTACACGCGGCCACTTGTTTAGCCAGCCTGGTTTaGTGTTTCTGGATGCTGAGCCAAAAAGCCACTACA +
Preference number: 3 (lower is better)
Translates to: FLHAATCLASLV*CFWMLSQKATT
Trigger: TGTAGTGGCTTTTTGGCTCAGCATCCAGAAACACCAAACCAGGCTGGCTAAACAAGTGGCCGCGTGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp CTACAAGGGAACATCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTTGAGGGCCAAAATGGAATATTaGGTTCCTGGGTCTCAGAGC +
Preference number: 3 (lower is better)
Translates to: LQGNIFATQRQYSFAVLRAKMEY*VPGSQS
Trigger: GCTCTGAGACCCAGGAACCAAATATTCCATTTTGGC...CCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp CAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTGCATGCCATGCACACACTGCCCTGGTTTCCTCTaGCCCTTTTCAACTGTCCTT +
Preference number: 3 (lower is better)
Translates to: QIFASSPDYLHTCMPCTHCPGFL*PFSTVL
Trigger: AAGGACAGTTGAAAAGGGCAAGAGGAAACCAGGGCA...GTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGACTTGACAACAATGGGTaGAGTAGAGTTCCAATTTTC +
Preference number: 3 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERLDNNG*SRVPIF
Trigger: GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAG...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTCATCCACCTCTGGGTTaGCTCGTGTGTTTCAGAAAA +
Preference number: 3 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLHPPLG*LVCFRK
Trigger: TTTTCTGAAACACACGAGCAAACCCAGAGGTGGATG...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 72 bp CCGGGAGCTAGATCATCTTATATCCCAGGGGGAAGATaGCAGACCTCTTTGTACCAAGCCTGCAATTTTCAA +
Preference number: 3 (lower is better)
Translates to: PGARSSYIPGGR*QTSLYQACNFQ
Trigger: TTGAAAATTGCAGGCTTGGTACAAAGAGGTCTGTCATCTTCCCCCTGGGATATAAGATGATCTAGCTCCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 72 bp TGCTATCCAGTCACCAGCACTCCTCTAGAACTGCCCTaGTTTCCTCTTGCCCTTTTCAACTGTCCTTTAAAA +
Preference number: 3 (lower is better)
Translates to: CYPVTSTPLELP*FPLALFNCPLK
Trigger: TTTTAAAGGACAGTTGAAAAGGGCAAGAGGAAACCAGGGCAGTTCTAGAGGAGTGCTGGTGACTGGATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACTTGACAACAATGGGTaGAGTAGAGTTCCAATTTTC +
Preference number: 3 (lower is better)
Translates to: RHFLPFKVGPKGKCVWQTLDNNG*SRVPIF
Trigger: GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAG...TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR TCA 72 bp CTCAAACTTCATGCTCCTAGAAGTAGCCTTCAGGTCTaGGCAATGAGGGTTCTAAGACACCATCCAAATGCA +
Preference number: 3 (lower is better)
Translates to: LKLHAPRSSLQV*AMRVLRHHPNA
Trigger: TGCATTTGGATGGTGTCTTAGAACCCTCATTGCTCAGACCTGAAGGCTACTTCTAGGAGCATGAAGTTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 72 bp CTCATGAGGCCTGAGGCTAAGAATGAAACAGATCTTTaGTTCTTCCCCAGATTACTTACATACGTGCATGCC +
Preference number: 3 (lower is better)
Translates to: LMRPEAKNETDL*FFPRLLTYVHA
Trigger: GGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTGTTTCATTCTTAGCCTCAGGCCTCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR TCA 72 bp GGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTaGGTAGAGTTCCAATTTTCTCCACCTCCTGCATGG +
Preference number: 3 (lower is better)
Translates to: GRKISSSLTTMG*VEFQFSPPPAW
Trigger: CCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR TCA 72 bp TCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTTaGGGTTTGGTTCTGGTAAAATGGGGACACGTTTAT +
Preference number: 3 (lower is better)
Translates to: SLPHKDSTASLC*GLVLVKWGHVY
Trigger: ATAAACGTGTCCCCATTTTACCAGAACCAAACCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 72 bp GAGATGCTTCATCATCATTTTGGATCCATGTCCTCTTaGGTACGTTTTTCTGCTTTCCCTACCCACTTGAGA +
Preference number: 3 (lower is better)
Translates to: EMLHHHFGSMSS*VRFSAFPTHLR
Trigger: TCTCAAGTGGGTAGGGAAAGCAGAAAAACGTACGCAAGAGGACATGGATCCAAAATGATGATGAAGCATCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp CTCCTGCTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTAATGTGCATCCACCTCTGGGTTaGCTCGTGTGTTTCAGAAAA +
Preference number: 3 (lower is better)
Translates to: LLLHENTYRHSNLFEINVHPPLG*LVCFRK
Trigger: TTTTCTGAAACACACGAGCAAACCCAGAGGTGGATG...CACATTAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTAGAATAAAGTACCAATaGAAGGTGGCAGTTCTGTCT +
Preference number: 3 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLRIKYQ*KVAVLS
Trigger: AGACAGAACTGCCACCTTCAATTGGTACTTTATTCT...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 72 bp GGTCTGAGCAATGAGGGTTCTAAGACACCATCCAAATaGAGCCAAACGTGTCATTTCATCACATTCAAAGTT +
Preference number: 3 (lower is better)
Translates to: GLSNEGSKTPSK*SQTCHFITFKV
Trigger: AACTTTGAATGTGATGAAATGACACGTTTGGCTGCATTTGGATGGTGTCTTAGAACCCTCATTGCTCAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 72 bp TCTTTGCTTCTTCCCCAGATTACTTACATACGTGCATaGCATGCACACACTACTTCAAACCTTTCTGTAGTC +
Preference number: 3 (lower is better)
Translates to: SLLLPQITYIRA*HAHTTSNLSVV
Trigger: GACTACAGAAAGGTTTGAAGTAGTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 72 bp CAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTaGATGCCATGCACACACTACTTCAAACCTTTCTGT +
Preference number: 3 (lower is better)
Translates to: QIFASSPDYLHT*MPCTHYFKPFC
Trigger: ACAGAAAGGTTTGAAGTAGTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 72 bp GGTGAATTTGCTTCTGTAAATTTCAGCTTGCAGAAGTaGTGGCAGGTATCTCTTCAACAAAACCTGGAAAAG +
Preference number: 3 (lower is better)
Translates to: GEFASVNFSLQK*WQVSLQQNLEK
Trigger: CTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGCACTTCTGCAAGCTGAAATTTACAGAAGCAAATTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR-3UTR CAA 90 bp CTCCTGCTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTAATGTGCTTGACAACAATGGGTaGAGTAGAGTTCCAATTTTC +
Preference number: 3 (lower is better)
Translates to: LLLHENTYRHSNLFEINVLDNNG*SRVPIF
Trigger: GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAG...CACATTAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR GCA 72 bp CTCTTTGAGATTAATGTGATAATAGACACTATACATTaGATATGCACTGGGCCTCAGCAGATCCTTCCAACT +
Preference number: 3 (lower is better)
Translates to: LFEINVIIDTIH*ICTGPQQILPT
Trigger: AGTTGGAAGGATCTGCTGAGGCCCAGTGCATATGCAATGTATAGTGTCTATTATCACATTAATCTCAAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CCA 72 bp ATACATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTaGCCGAATAGTGAAGGTAATCAACACAGTCAATGT +
Preference number: 3 (lower is better)
Translates to: IHAFYKVIKRSG*PNSEGNQHSQC
Trigger: ACATTGACTGTGTTGATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTAGGTTCCGATGGGACACCTaGAACCGGCCATCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: CHGGEPRAGATHAVVLTRFRWDT*NRPSRD
Trigger: GTCCCTGGATGGCCGGTTGCAGGTGTCCCATCGGAA...CCTAGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTAGGACAGCCTCAAAGCCCTaGTTGACCGACTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CHGGEPRAGATHAVVLTRTASKP*LTDWAR
Trigger: CCTGGCCCAGTCGGTCAACCAGGGCTTTGAGGCTGT...CCTAGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTAGGAGGTCTGCATGGCCCTaGGGGCTCTTCCTACCTAGA +
Preference number: 4 (lower is better)
Translates to: CHGGEPRAGATHAVVLTRRSAWP*GLFLPR
Trigger: TCTAGGTAGGAAGAGCCCGCAGGGCCATGCAGACCT...CCTAGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp AGCTGCAAGGTGAAGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCACAGGACCCTGCAGATaGGGCATCAGGAAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SCKVKMSWRGAQGRGNTRTGPCR*GIRKPL
Trigger: GAGAGGCTTCCTGATGCCTCATCTGCAGGGTCCTGT...GCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCTTCACCTTGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAGATCCCTCCGCCTCTaGGGCCTCACCGCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: AHLSHQSRRHFLPFKVGPRSLRL*GLTAPP
Trigger: TGGCGGGGCGGTGAGGCCGCAGAGGCGGAGGGATCT...TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR GCA 90 bp TGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTAGGGACAATGGAGACGTCTaGCAGCAGCCTTGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: CHGGEPRAGATHAVVLTRDNGDV*QQPCPH
Trigger: ATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTC...CCTAGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp AGCTGCAAGGTGAAGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCCTTTCCCTACCCACTTaGGAAGCGGCTGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: SCKVKMSWRGAQGRGNTRLSLPT*EAADAP
Trigger: AGGAGCATCAGCCGCTTCTCAAGTGGGTAGGGAAAG...GCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCTTCACCTTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCAAGCTCGTGGTGGCTGTaGAGGTCTGGCCATCGCCAC +
Preference number: 4 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPSSWWL*RSGHRH
Trigger: GTGGCGATGGCCAGACCTGCACAGCCACCACGAGCT...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTACAGTCATGGATGGCTaGGAGGCGTGGAATGTCTCC +
Preference number: 4 (lower is better)
Translates to: RCHGGEPRAGATHAVVLTTVMDG*EAWNVS
Trigger: GGAGACATTCCACGCCTCGCAGCCATCCATGACTGT...AGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CATGGCCCTGCGGGCTCTTCCTACCTAGAACGCCCTTCCAAGGTGAACTCCACAGCTGGGCATGAGGTCTaGATGGCCCTGCGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: HGPAGSSYLERPSKVNSTAGHEV*MALRAL
Trigger: AAGAGCCCGCAGGGCCATGCAGACCTCATGCCCAGC...TGTGGAGTTCACCTTGGAAGGGCGTTCTAGGTAGGAAGAGCCCGCAGGGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGACAAGGGGCAAGGTCTaGTGGAGTGGTGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SRWIMQALGNCCPWLLGETRGKV*WSGGAG
Trigger: CCCCGCCCCACCACTCCAGCAGACCTTGCCCCTTGT...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTCACCCAGTGTGGTGCTaGCTGAGACCAAATGCCATC +
Preference number: 4 (lower is better)
Translates to: RCHGGEPRAGATHAVVLTHPVWC*LRPNAI
Trigger: GATGGCATTTGGTCTCAGGCAGCACCACACTGGGTG...AGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CATGGCCCTGCGGGCTCTTCCTACCTAGAACGCCCTTCCAAGGTGAACTCCACAACAGGCGGCAGTAGATaGCATGAGGGAGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: HGPAGSSYLERPSKVNSTTGGSR*HEGAPS
Trigger: GGAAGGGGCTCCCTCATGTCATCTACTGCCGCCTGT...TGTGGAGTTCACCTTGGAAGGGCGTTCTAGGTAGGAAGAGCCCGCAGGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTAGGAGCTGGCTGGGAACATaGACACATGTACAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: CHGGEPRAGATHAVVLTRSWLGT*THVQEV
Trigger: AACCTCCTGTACATGTGTTCATGTTCCCAGCCAGCT...CCTAGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTCAGAAAACAGGTGGGTaGACCCCTTCAGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: RCHGGEPRAGATHAVVLTQKTGG*TPSVEG
Trigger: TCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTG...AGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCAACAAGGGGCAAGGTCTaGTGGAGTGGTGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: WIMQALGNCCPWLLGEEPTRGKV*WSGGAG
Trigger: CCCCGCCCCACCACTCCAGCAGACCTTGCCCCTTGT...TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCACCCTGGTTGACCGACTaGGCCAGGAGGGCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: AHLSHQSRRHFLPFKVGPPWLTD*ARRAAN
Trigger: GTTCGCTGCCCTCCTGGCCCAGTCGGTCAACCAGGG...TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CATGGCCCTGCGGGCTCTTCCTACCTAGAACGCCCTTCCAAGGTGAACTCCACACAGTGTGGTGCTGCCTaGGACCAAATGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: HGPAGSSYLERPSKVNSTQCGAA*DQMPSH
Trigger: GTGGGATGGCATTTGGTCTCAGGCAGCACCACACTG...TGTGGAGTTCACCTTGGAAGGGCGTTCTAGGTAGGAAGAGCCCGCAGGGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTAGGAGTAGCCTTCAGGTCTaGGCAATGAGGGTTCTAAGA +
Preference number: 4 (lower is better)
Translates to: CHGGEPRAGATHAVVLTRSSLQV*AMRVLR
Trigger: TCTTAGAACCCTCATTGCTCAGACCTGAAGGCTACT...CCTAGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp AGCTGCAAGGTGAAGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGAAGGGCCCAGATTTaGCTCAGAGCTGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: SCKVKMSWRGAQGRGNTRGRAQI*LRAVCF
Trigger: AAAACAGACAGCTCTGAGTCAAATCTGGGCCCTTCC...GCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCTTCACCTTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAATCCTGGTGGGATCTTaGAGACGGTGGCCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: AHLSHQSRRHFLPFKVGPILVGS*RRWPGA
Trigger: GGCACCCGGCCACCGTCTGCAAGATCCCACCAGGAT...TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGACAAGGGGCAAGGTCTaGTGGAGTGGTGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SAHLSHQSRRHFLPFKVGTRGKV*WSGGAG
Trigger: CCCCGCCCCACCACTCCAGCAGACCTTGCCCCTTGT...CCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCAGCAGCAGGTGGATCATaGAGGCCCTCGGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPAAGGS*RPSETA
Trigger: AGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGC...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCCACGGGGTAGCTGTTTaGGTGCCGCCTCCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFHGVAV*VPPPGR
Trigger: CCTTCCCGGAGGCGGCACCCAAACAGCTACCCCGTG...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR CCA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTGATGGACGACATGGCTaGGGAGGGCGCGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSDGRHG*GGRAGG
Trigger: GCCGCCCGCGCGCCCTCCCCAGCCATGTCGTCCATC...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR CCA 90 bp TCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGGATGGCTGCGAGGCGTaGAATGTCTCCCCGACGCGC +
Preference number: 4 (lower is better)
Translates to: SAHLSHQSRRHFLPFKVGDGCEA*NVSPTR
Trigger: GCGCGTCGGGGAGACATTCCACGCCTCGCAGCCATC...CCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCGATGGCTGCGAGGCGTaGAATGTCTCCCCGACGCGC +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFDGCEA*NVSPTR
Trigger: GCGCGTCGGGGAGACATTCCACGCCTCGCAGCCATC...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGGATGGCTGCGAGGCGTaGAATGTCTCCCCGACGCGC +
Preference number: 4 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLDGCEA*NVSPTR
Trigger: GCGCGTCGGGGAGACATTCCACGCCTCGCAGCCATC...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGCCCTGGTTGACCGACTaGGCCAGGAGGGCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREPWLTD*ARRAAN
Trigger: GTTCGCTGCCCTCCTGGCCCAGTCGGTCAACCAGGG...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGGCATGAGGTCTGCATaGCCCTGCGGGCTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: SRWIMQALGNCCPWLLGEGMRSA*PCGLFL
Trigger: TAGGAAGAGCCCGCAGGGCCATGCAGACCTCATGCC...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAGGGGCGGGGCTGGGCTaGGAATGTTCACTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: AHLSHQSRRHFLPFKVGPGAGLG*ECSLEE
Trigger: CTCTTCCAGTGAACATTCCCAGCCCAGCCCCGCCCC...TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGTCACGATCGGGGGAGTaGAAGGCAGGATGGACGACA +
Preference number: 4 (lower is better)
Translates to: SRWIMQALGNCCPWLLGESRSGE*KAGWTT
Trigger: TGTCGTCCATCCTGCCTTTCACTCCCCCGATCGTGA...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR TCA 90 bp AGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTGTCGTGTTGACTAGGTaGACGCCACTTAAAACTGCT +
Preference number: 4 (lower is better)
Translates to: RCHGGEPRAGATHAVVLTVVLTR*TPLKTA
Trigger: AGCAGTTTTAAGTGGCGTTCACCTAGTCAACACGAC...AGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTGGCTGTGCCCAGGAGTGGTGTAACCTaGGCTCCGGCCCTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: AEPKSHYTLHQHSELAVPRSGVT*APALWR
Trigger: TCTCCACAGGGCCGGAGCTCAGGTTACACCACTCCT...GGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGTATCCCCCTTGGTaGACAGTCCTACAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPWYPPW*TVLQAA
Trigger: GGCTGCTTGTAGGACTGTTCACCAAGGGGGATACCA...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGAGCTCGGCCGGGGCCTaGCGCGGTCGCCCAAACTTC +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWSSAGA*RGRPNF
Trigger: GAAGTTTGGGCGACCGCGGCAGGCCCCGGCCGAGCT...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR GCA 90 bp GAGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAGAACACTTACCAGCTCGTGGTGGCTGTaGAGGTCTGGCCATCGCCAC +
Preference number: 4 (lower is better)
Translates to: ETKCHPTTRASCFMRTLTSSWWL*RSGHRH
Trigger: GTGGCGATGGCCAGACCTGCACAGCCACCACGAGCT...GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTATCCTGGTGGGATCTTaGAGACGGTGGCCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LSHQSRRHFLPFKVGPKGILVGS*RRWPGA
Trigger: GGCACCCGGCCACCGTCTGCAAGATCCCACCAGGAT...ACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GGGGGCCGGTGGTGTAATACTACCTGTTCTGCTCACTTAAGCCACCAGAGCAGACACTGGAACAGCGGATaGTTGGGGAGCCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: GGRWCNTTCSAHLSHQSRHWNSG*LGSPSG
Trigger: CCCAGATGGGCTCCCCAAGCATCCGCTGTTCCAGTG...TCTGCTCTGGTGGCTTAAGTGAGCAGAACAGGTAGTATTACACCACCGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGGCTGGGCATGAGGTCTaGATGGCCCTGCGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SAHLSHQSRRHFLPFKVGAGHEV*MALRAL
Trigger: AAGAGCCCGCAGGGCCATGCAGACCTCATGCCCAGC...CCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGTCAGGTCTACAGCCTaGCAGGAAGGTGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: SRWIMQALGNCCPWLLGEVRSTA*QEGGQL
Trigger: CAGTTGGCCACCTTCCTGGCAGGCTGTAGACCTGAC...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGAGGGAGCCCCTTCCGATaGGACACCTGCAACCGGCCA +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERGSPFR*DTCNRP
Trigger: TGGCCGGTTGCAGGTGTCCCATCGGAAGGGGCTCCC...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGGCCCGTAGCTCGTGGTaGCTGTGCAGGTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLARSSW*LCRSGH
Trigger: ATGGCCAGACCTGCACAGCCACCACGAGCTACGGGC...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAGCCGGGATCTCTGTGTaGCGTGGCACCAACACAGGA +
Preference number: 4 (lower is better)
Translates to: AHLSHQSRRHFLPFKVGPAGISV*RGTNTG
Trigger: TCCTGTGTTGGTGCCACGCCACACAGAGATCCCGGC...TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGACCCTGGTTGACCGACTaGGCCAGGAGGGCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERPWLTD*ARRAAN
Trigger: GTTCGCTGCCCTCCTGGCCCAGTCGGTCAACCAGGG...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGCCCTGGTTGACCGACTaGGCCAGGAGGGCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: TRADAISCPSKWGQRVNVPWLTD*ARRAAN
Trigger: GTTCGCTGCCCTCCTGGCCCAGTCGGTCAACCAGGG...CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCGGGGCGGGGCTGGGCTaGGAATGTTCACTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFGAGLG*ECSLEE
Trigger: CTCTTCCAGTGAACATTCCCAGCCCAGCCCCGCCCC...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCGGATCGTGCAGCAGGTaGATCATGCAGGCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: CSLKPPEQTPFLALQSGAGSCSR*IMQALG
Trigger: TCCGAGGGCCTGCATGATCCACCTGCTGCACGATCC...GGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTAGGACTTCCATAGATCACTaGATCACCAGAATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CHGGEPRAGATHAVVLTRTSIDH*ITRIRL
Trigger: CAGCCTGATTCTGGTGATCCAGTGATCTATGGAAGT...CCTAGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTAGGACTCTAAGGTGGGAATaGCACCATTTCCTAACCTCT +
Preference number: 4 (lower is better)
Translates to: CHGGEPRAGATHAVVLTRTLRWE*HHFLTS
Trigger: AGAGGTTAGGAAATGGTGCCATTCCCACCTTAGAGT...CCTAGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CATGGCCCTGCGGGCTCTTCCTACCTAGAACGCCCTTCCAAGGTGAACTCCACAGTAAGGACGAAGGAGTaGTGTAACCTGAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: HGPAGSSYLERPSKVNSTVRTKE*CNLSSG
Trigger: GCCGGAGCTCAGGTTACACCACTCCTTCGTCCTTAC...TGTGGAGTTCACCTTGGAAGGGCGTTCTAGGTAGGAAGAGCCCGCAGGGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGGGGGAGATGGAAGGCTaGCCCACAAGCTCCGACTCC +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREGEMEG*PTSSDS
Trigger: GGAGTCGGAGCTTGTGGGCCAGCCTTCCATCTCCCC...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560424.1
CDS-3UTR TCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGACAGGCGGCAGTAGATaGCATGAGGGAGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLRETGGSR*HEGAPS
Trigger: GGAAGGGGCTCCCTCATGTCATCTACTGCCGCCTGT...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCACAGGCGGCAGTAGATaGCATGAGGGAGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFTGGSR*HEGAPS
Trigger: GGAAGGGGCTCCCTCATGTCATCTACTGCCGCCTGT...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGTGTGCAGGTTCTGCTaGACACGCACCTCCCAATCA +
Preference number: 4 (lower is better)
Translates to: SRWIMQALGNCCPWLLGEVCRFC*TRTSQS
Trigger: TGATTGGGAGGTGCGTGTTCAGCAGAACCTGCACAC...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCACAGGACCCTGCAGATaGGGCATCAGGAAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: CSLKPPEQTPFLALQSGATGPCR*GIRKPL
Trigger: GAGAGGCTTCCTGATGCCTCATCTGCAGGGTCCTGT...GGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAGGAGTGGTGTAACCTaGGCTCCGGCCCTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLRERSGVT*APALWR
Trigger: TCTCCACAGGGCCGGAGCTCAGGTTACACCACTCCT...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CATGGCCCTGCGGGCTCTTCCTACCTAGAACGCCCTTCCAAGGTGAACTCCACATTGGTGTTGACGTTCTaGGTGGTGATGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HGPAGSSYLERPSKVNSTLVLTF*VVMAFS
Trigger: GGAGAAGGCCATCACCACGCAGAACGTCAACACCAA...TGTGGAGTTCACCTTGGAAGGGCGTTCTAGGTAGGAAGAGCCCGCAGGGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR GCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGACAGTCATGGATGGCTaGGAGGCGTGGAATGTCTCC +
Preference number: 4 (lower is better)
Translates to: SRWIMQALGNCCPWLLGETVMDG*EAWNVS
Trigger: GGAGACATTCCACGCCTCGCAGCCATCCATGACTGT...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCCACTGGAACAGCGGATaGTTGGGGAGCCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFHWNSG*LGSPSG
Trigger: CCCAGATGGGCTCCCCAAGCATCCGCTGTTCCAGTG...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GGGGGCCGGTGGTGTAATACTACCTGTTCTGCTCACTTAAGCCACCAGAGCAGACTGCCTGAGACCAAATaGCATCCCACGACAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GGRWCNTTCSAHLSHQSRLPETK*HPTTRA
Trigger: GGCCCTTGTCGTGGGATGGCATTTGGTCTCAGGCAG...TCTGCTCTGGTGGCTTAAGTGAGCAGAACAGGTAGTATTACACCACCGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AGCTGCAAGGTGAAGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCAGTTTTCTCCCTAATTaGTGCTGGGAGCAGTACTTG +
Preference number: 4 (lower is better)
Translates to: SCKVKMSWRGAQGRGNTRSFLPN*CWEQYL
Trigger: CAAGTACTGCTCCCAGCAGCAATTAGGGAGAAAACT...GCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCTTCACCTTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GTCACCGGTGATCCTCTACCGGGAGCTAGATCATCTTATATCCCAGGGGGAAGAACTCACACAGCTCCATaGCCCGTAGCTCGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: VTGDPLPGARSSYIPGGRTHTAP*PVARGG
Trigger: GCCACCACGAGCTACGGGCCATGGAGCTGTGTGAGT...TCTTCCCCCTGGGATATAAGATGATCTAGCTCCCGGTAGAGGATCACCGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGAGCTGTAGTCGTCCAGTaGGGGGAACTCGGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERAVVVQ*GELGRD
Trigger: ATCCCGGCCGAGTTCCCCCCACTGGACGACTACAGC...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCAAGCCATCCACAGTCATaGATGGCTGCGAGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: WIMQALGNCCPWLLGEEPSHPQS*MAARRG
Trigger: TCCACGCCTCGCAGCCATCCATGACTGTGGATGGCT...TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAGCCATCCACAGTCATaGATGGCTGCGAGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: CSLKPPEQTPFLALQSGASHPQS*MAARRG
Trigger: TCCACGCCTCGCAGCCATCCATGACTGTGGATGGCT...GGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCACAGCCTCAAAGCCCTaGTTGACCGACTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFTASKP*LTDWAR
Trigger: CCTGGCCCAGTCGGTCAACCAGGGCTTTGAGGCTGT...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCATGACTGCTCTAGCAACAGCCTCAAAGCCCTaGTTGACCGACTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PRKLLPMAFRRGTMTALATASKP*LTDWAR
Trigger: CCTGGCCCAGTCGGTCAACCAGGGCTTTGAGGCTGT...TGCTAGAGCAGTCATGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGTCCAGCAGGGGGTACTaGTCACAGTCTGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SRWIMQALGNCCPWLLGESSRGY*SQSVSC
Trigger: ACAGGAGACAGACTGTGACCAGTACCCCCTGCTGGA...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGCTGCAAGGTGAAGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGTTTTGTATTGTCTCTaGGTTCTGAGTCAACCCTCC +
Preference number: 4 (lower is better)
Translates to: SCKVKMSWRGAQGRGNTRVLYCL*VLSQPS
Trigger: GGAGGGTTGACTCAGAACCCAGAGACAATACAAAAC...GCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCTTCACCTTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGCTGCAAGGTGAAGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCTGTAGCACTCTAAGGTaGGAATGGCACCATTTCCTA +
Preference number: 4 (lower is better)
Translates to: SCKVKMSWRGAQGRGNTRCSTLR*EWHHFL
Trigger: TAGGAAATGGTGCCATTCCCACCTTAGAGTGCTACA...GCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCTTCACCTTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGCCCCTAGCAAGGGAGTaGGGCTTGGTTCAGAGGACC +
Preference number: 4 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLPLARE*GLVQRT
Trigger: GGTCCTCTGAACCAAGCCCCACTCCCTTGCTAGGGG...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGCAGTGTGGTGCTGCCTaGGACCAAATGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLQCGAA*DQMPSH
Trigger: GTGGGATGGCATTTGGTCTCAGGCAGCACCACACTG...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTGCACAAGCTGCAAGGTaGAGATGTCATGGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: LSHQSRRHFLPFKVGPKGAQAAR*RCHGGE
Trigger: CTCCCCGCCATGACATCTTCACCTTGCAGCTTGTGC...ACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCAACTCTCGGCGAAGTTaGCGGGGCGCCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSNSRRS*RGAGPG
Trigger: GCCCGGCCCGGCGCCCCGGCAACTTCGCCGAGAGTT...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR GCA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGGTCACTGAGGCACTCTaGGAAGACCTCCCCTCCGAT +
Preference number: 4 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVVTEAL*EDLPSD
Trigger: ATCGGAGGGGAGGTCTTCGCAGAGTGCCTCAGTGAC...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAATCCTGGTGGGATCTTaGAGACGGTGGCCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKILVGS*RRWPGA
Trigger: GGCACCCGGCCACCGTCTGCAAGATCCCACCAGGAT...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAAGGCCCATTCAGGTaGAGCTCAATCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: AHLSHQSRRHFLPFKVGPKGPFR*SSIQQG
Trigger: CCCCTGCTGGATTGAGCTGCACCTGAATGGGCCTTT...TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGCACTGGAACAGCGGATaGTTGGGGAGCCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: FCSLKPPEQTPFLALQSGHWNSG*LGSPSG
Trigger: CCCAGATGGGCTCCCCAAGCATCCGCTGTTCCAGTG...CCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTCTGCCTGAGACCAAATaGCATCCCACGACAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LSHQSRRHFLPFKVGPKGLPETK*HPTTRA
Trigger: GGCCCTTGTCGTGGGATGGCATTTGGTCTCAGGCAG...ACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AGCTGCAAGGTGAAGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCATAGCCCTTTTCATTTaGCTATGTTGGCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: SCKVKMSWRGAQGRGNTRIALFI*LCWPEM
Trigger: CATCTCAGGCCAACATAGGCAAATGAAAAGGGCTAT...GCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCTTCACCTTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CATGGCCCTGCGGGCTCTTCCTACCTAGAACGCCCTTCCAAGGTGAACTCCACAACCAGAATCAGGCTGTaGCTGAAGCTAGTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: HGPAGSSYLERPSKVNSTTRIRL*LKLVPK
Trigger: CTTGGGAACTAGCTTCAGGCACAGCCTGATTCTGGT...TGTGGAGTTCACCTTGGAAGGGCGTTCTAGGTAGGAAGAGCCCGCAGGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGAATGGCCCGTAGCTCGTaGTGGCTGTGCAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRMARSS*WLCRSG
Trigger: GCCAGACCTGCACAGCCACCACGAGCTACGGGCCAT...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGGCCGGGATCTCTGTGTaGCGTGGCACCAACACAGGA +
Preference number: 4 (lower is better)
Translates to: TRADAISCPSKWGQRVNVAGISV*RGTNTG
Trigger: TCCTGTGTTGGTGCCACGCCACACAGAGATCCCGGC...CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACGCTGTAGTCGTCCAGTaGGGGGAACTCGGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHAVVVQ*GELGRD
Trigger: ATCCCGGCCGAGTTCCCCCCACTGGACGACTACAGC...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGTCTGGAATATTGCTCTaGGGCTCGATGCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLSGILL*GSMPAG
Trigger: CCCCGCAGGCATCGAGCCCCAGAGCAATATTCCAGA...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GGGGGCCGGTGGTGTAATACTACCTGTTCTGCTCACTTAAGCCACCAGAGCAGACCTGCGTCCATGCTGTaGTTCATCTGGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: GGRWCNTTCSAHLSHQSRPASML*FIWWSL
Trigger: CAGTGACCACCAGATGAACCACAGCATGGACGCAGG...TCTGCTCTGGTGGCTTAAGTGAGCAGAACAGGTAGTATTACACCACCGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GAGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAGAACACTTACCGCTCGTAGTAGGAGATaGAGCACCAGAAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: ETKCHPTTRASCFMRTLTARSRR*STRRPA
Trigger: AGCCGGCCTTCTGGTGCTCCATCTCCTACTACGAGC...GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCGCTCGTAGTAGGAGATaGAGCACCAGAAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFARSRR*STRRPA
Trigger: AGCCGGCCTTCTGGTGCTCCATCTCCTACTACGAGC...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGATGGCTGCGAGGCGTaGAATGTCTCCCCGACGCGC +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWDGCEA*NVSPTR
Trigger: GCGCGTCGGGGAGACATTCCACGCCTCGCAGCCATC...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCCAGGTTGCATCCTGGTaGGATCTTGCAGACGGTGGC +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFQVASW*DLADGG
Trigger: GCCACCGTCTGCAAGATCCCACCAGGATGCAACCTG...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCAGGTTGCATCCTGGTaGGATCTTGCAGACGGTGGC +
Preference number: 4 (lower is better)
Translates to: SAHLSHQSRRHFLPFKVGQVASW*DLADGG
Trigger: GCCACCGTCTGCAAGATCCCACCAGGATGCAACCTG...CCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCCTTGGGGAGCCCATCTaGGTGAGGACCTTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFLGEPI*VRTLSS
Trigger: GCTTGACAAGGTCCTCACCCAGATGGGCTCCCCAAG...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGCTTGGGGAGCCCATCTaGGTGAGGACCTTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLLGEPI*VRTLSS
Trigger: GCTTGACAAGGTCCTCACCCAGATGGGCTCCCCAAG...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GAGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAGAACACTTACCGGGGGAGGGGGCCGGTaGTGTAATACTACCTGTTCT +
Preference number: 4 (lower is better)
Translates to: ETKCHPTTRASCFMRTLTGGGGR*CNTTCS
Trigger: AGAACAGGTAGTATTACACCACCGGCCCCCTCCCCC...GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGCTCTTACAGATGACTaGAGACGCACCCAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SRWIMQALGNCCPWLLGEALTDD*RRTQCG
Trigger: ACCACACTGGGTGCGTCTCCAGTCATCTGTAAGAGC...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGCTGCAAGGTGAAGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCTTCATTTGCCTATGTTaGCCTGAGATGTTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SCKVKMSWRGAQGRGNTRFICLC*PEMFPF
Trigger: GAAGGGAAACATCTCAGGCCAACATAGGCAAATGAA...GCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCTTCACCTTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GAGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAGAACACTTACCTGTCCTCAGGAGGCTTaGGGAGCAGCTGTCCTACCT +
Preference number: 4 (lower is better)
Translates to: ETKCHPTTRASCFMRTLTCPQEA*GAAVLP
Trigger: AGGTAGGACAGCTGCTCCCCAAGCCTCCTGAGGACA...GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGAGCCTGCCAGGAAGGTaGCCAACTGAGATGATGTTC +
Preference number: 4 (lower is better)
Translates to: SRWIMQALGNCCPWLLGESLPGR*PTEMMF
Trigger: GAACATCATCTCAGTTGGCCACCTTCCTGGCAGGCT...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGCCCCTAGCAAGGGAGTaGGGCTTGGTTCAGAGGACC +
Preference number: 4 (lower is better)
Translates to: FCSLKPPEQTPFLALQSGPLARE*GLVQRT
Trigger: GGTCCTCTGAACCAAGCCCCACTCCCTTGCTAGGGG...CCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAATTGGAGGGGTCGGTaGAGCCATCCACAGTCATGG +
Preference number: 4 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLNWRGR*SHPQSW
Trigger: CCATGACTGTGGATGGCTTCACCGACCCCTCCAATT...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAATTGGAGGGGTCGGTaGAGCCATCCACAGTCATGG +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFNWRGR*SHPQSW
Trigger: CCATGACTGTGGATGGCTTCACCGACCCCTCCAATT...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTGGCTGTGCCCGGGCCTCCTGCTTCATaGGAACACTTACCGTCATTC +
Preference number: 4 (lower is better)
Translates to: AEPKSHYTLHQHSELAVPGPPAS*EHLPSF
Trigger: GAATGACGGTAAGTGTTCTCATGAAGCAGGAGGCCC...GGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCATGACTGCTCTAGCAGCAAGCTCTTACAGATaGCTGGAGACGCACCCAGTG +
Preference number: 4 (lower is better)
Translates to: PRKLLPMAFRRGTMTALAASSYR*LETHPV
Trigger: CACTGGGTGCGTCTCCAGTCATCTGTAAGAGCTTGC...TGCTAGAGCAGTCATGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GTCACCGGTGATCCTCTACCGGGAGCTAGATCATCTTATATCCCAGGGGGAAGACACACGCGGTCGTGTTaGCTAGGTGAACGCCACTTA +
Preference number: 4 (lower is better)
Translates to: VTGDPLPGARSSYIPGGRHTRSC*LGERHL
Trigger: TAAGTGGCGTTCACCTAGTCAACACGACCGCGTGTG...TCTTCCCCCTGGGATATAAGATGATCTAGCTCCCGGTAGAGGATCACCGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TTCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCACAAGCTGCAAGGTaGAGATGTCATGGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: FCSLKPPEQTPFLALQSGAQAAR*RCHGGE
Trigger: CTCCCCGCCATGACATCTTCACCTTGCAGCTTGTGC...CCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TACAACACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCGGTGGCCAACTGAGATaGTGTTCCAGCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: YNTDNIRTMETSASSLALGGQLR*CSSTGL
Trigger: CAGGCCTGTGCTGGAACATCATCTCAGTTGGCCACC...GAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTGTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGCTGTGGAGACCCTCATaGGGCCTGAGGCTAAGAATG +
Preference number: 4 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVLWRPS*GLRLRM
Trigger: CATTCTTAGCCTCAGGCCTCATGAGGGTCTCCACAG...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTTGGTATCCCCCTTGGTaGACAGTCCTACAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LSHQSRRHFLPFKVGPKGWYPPW*TVLQAA
Trigger: GGCTGCTTGTAGGACTGTTCACCAAGGGGGATACCA...ACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAGTGAAGACGGTTACCTaGAAGGGGCCTACAAGGGAA +
Preference number: 4 (lower is better)
Translates to: AHLSHQSRRHFLPFKVGPVKTVT*KGPTRE
Trigger: TTCCCTTGTAGGCCCCTTTCAGGTAACCGTCTTCAC...TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCACACTTGAGAAGCGGCTaGTGCTCCTTAAACTGTGAT +
Preference number: 4 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPHLRSG*CSLNCD
Trigger: ATCACAGTTTAAGGAGCATCAGCCGCTTCTCAAGTG...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCATGACTGCTCTAGCACTTTCCCTACCCACTTaGGAAGCGGCTGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: PRKLLPMAFRRGTMTALALSLPT*EAADAP
Trigger: AGGAGCATCAGCCGCTTCTCAAGTGGGTAGGGAAAG...TGCTAGAGCAGTCATGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GGGGGCCGGTGGTGTAATACTACCTGTTCTGCTCACTTAAGCCACCAGAGCAGAAATCCCAGGTCTCTCTaGCCATCACATCACACCACC +
Preference number: 4 (lower is better)
Translates to: GGRWCNTTCSAHLSHQSRNPRSL*PSHHTT
Trigger: GGTGGTGTGATGTGATGGTCAGAGAGACCTGGGATT...TCTGCTCTGGTGGCTTAAGTGAGCAGAACAGGTAGTATTACACCACCGGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679624.1
CDS-3UTR GCA 90 bp CTCCTGCTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTAATGTGGGCGGACGGCAGCAGTaGAGGGTCGGGAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LLLHENTYRHSNLFEINVGGRQQ*RVGKAP
Trigger: CGGGGCCTTCCCGACCCTGCACTGCTGCCGTCCGCC...CACATTAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR GCA 90 bp TTCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGCACCATTTCTCCTCCTaGCCGTTCTGCTCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: FCSLKPPEQTPFLALQSGHHFSS*PFCSPF
Trigger: GAAGGGCGAGCAGAACGGGCAGGAGGAGAAATGGTG...CCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR GCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTAGCTCGTGGTGGCTGTaGAGGTCTGGCCATCGCCAC +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFSSWWL*RSGHRH
Trigger: GTGGCGATGGCCAGACCTGCACAGCCACCACGAGCT...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAGAGAGAAGCTCGTGGTGGCTGTaGAGGTCTGGCCATCGCCAC +
Preference number: 4 (lower is better)
Translates to: AGRYLFNKTWKSFTSGERSSWWL*RSGHRH
Trigger: GTGGCGATGGCCAGACCTGCACAGCCACCACGAGCT...TCTCTCTCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGGGGTCTCTGGAATATTaGTCTGGGGCTCGATGCCTG +
Preference number: 4 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVGSLEY*SGARCL
Trigger: CAGGCATCGAGCCCCAGAGCAATATTCCAGAGACCC...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCACAGTCATGGATGGCTaGGAGGCGTGGAATGTCTCC +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFTVMDG*EAWNVS
Trigger: GGAGACATTCCACGCCTCGCAGCCATCCATGACTGT...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGACAGTCATGGATGGCTaGGAGGCGTGGAATGTCTCC +
Preference number: 4 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLTVMDG*EAWNVS
Trigger: GGAGACATTCCACGCCTCGCAGCCATCCATGACTGT...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTCCCCATCCTGGTGGGATCTTaGAGACGGTGGCCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: NGLSRVPIFSTSCMAIFPILVGS*RRWPGA
Trigger: GGCACCCGGCCACCGTCTGCAAGATCCCACCAGGAT...GGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GGGGGCCGGTGGTGTAATACTACCTGTTCTGCTCACTTAAGCCACCAGAGCAGAAGCTCATGCGGATGGTaGACATTCGGGTCAACTGGT +
Preference number: 4 (lower is better)
Translates to: GGRWCNTTCSAHLSHQSRSSCGW*TFGSTG
Trigger: ACCAGTTGACCCGAATGTGCACCATCCGCATGAGCT...TCTGCTCTGGTGGCTTAAGTGAGCAGAACAGGTAGTATTACACCACCGGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACCACTGGAACAGCGGATaGTTGGGGAGCCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHHWNSG*LGSPSG
Trigger: CCCAGATGGGCTCCCCAAGCATCCGCTGTTCCAGTG...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCGCTGGGCATGAGGTCTaGATGGCCCTGCGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCAGHEV*MALRAL
Trigger: AAGAGCCCGCAGGGCCATGCAGACCTCATGCCCAGC...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGCACCCAGTGTGGTGCTaGCTGAGACCAAATGCCATC +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREHPVWC*LRPNAI
Trigger: GATGGCATTTGGTCTCAGGCAGCACCACACTGGGTG...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTACGCACCCAGTGTGGTaGTGCCTGAGACCAAATGCC +
Preference number: 4 (lower is better)
Translates to: HQSRRHFLPFKVGPKGKCTHPVW*CLRPNA
Trigger: GGCATTTGGTCTCAGGCAGCACCACACTGGGTGCGT...ACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTGCCCTCGGAAACTGCTaGCCATGGCTTTTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LSHQSRRHFLPFKVGPKGALGNC*PWLLGE
Trigger: CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGC...ACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGCAGCAGGTGGATCATaGAGGCCCTCGGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: HQSRRHFLPFKVGPKGKCAAGGS*RPSETA
Trigger: AGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGC...ACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGGCCCTCATAGGATCGTaGAGCAGGTGGATCATGCAG +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREALIGS*SRWIMQ
Trigger: CTGCATGATCCACCTGCTGCACGATCCTATGAGGGC...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GTCACCGGTGATCCTCTACCGGGAGCTAGATCATCTTATATCCCAGGGGGAAGAGCCCTCATAGGATCGTaGAGCAGGTGGATCATGCAG +
Preference number: 4 (lower is better)
Translates to: VTGDPLPGARSSYIPGGRALIGS*SRWIMQ
Trigger: CTGCATGATCCACCTGCTGCACGATCCTATGAGGGC...TCTTCCCCCTGGGATATAAGATGATCTAGCTCCCGGTAGAGGATCACCGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCATGCCACAGGTGGGTTTaGCTACAATCCCACACATCC +
Preference number: 4 (lower is better)
Translates to: AHLSHQSRRHFLPFKVGPCHRWV*LQSHTS
Trigger: GGATGTGTGGGATTGTAGGCAAACCCACCTGTGGCA...TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCAAGTCTCAGCACAAGCTaGAAGGTGAAGATGTCATGG +
Preference number: 4 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPSLSTS*KVKMSW
Trigger: CCATGACATCTTCACCTTGCAGCTTGTGCTGAGACT...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGGACAATGGAGACGTCTaGCAGCAGCCTTGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: SAHLSHQSRRHFLPFKVGDNGDV*QQPCPH
Trigger: ATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTC...CCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGGACAATGGAGACGTCTaGCAGCAGCCTTGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREDNGDV*QQPCPH
Trigger: ATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTC...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCGCCTTTCCACGTTTaGCTAGGGTGCAGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: FCSLKPPEQTPFLALQSGAPFHV*LGCRQD
Trigger: GTCTTGCCTGCACCCTAGGCAAACGTGGAAAGGCGC...CCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439724.7
CDS-3UTR GCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTTTCCTGGTGGGATCTTaGAGACGGTGGCCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFFLVGS*RRWPGA
Trigger: GGCACCCGGCCACCGTCTGCAAGATCCCACCAGGAA...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560424.1
CDS-3UTR CCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCATGGCCCGTAGCTCGTaGTGGCTGTGCAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCMARSS*WLCRSG
Trigger: GCCAGACCTGCACAGCCACCACGAGCTACGGGCCAT...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGATGGCCCGTAGCTCGTaGTGGCTGTGCAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWMARSS*WLCRSG
Trigger: GCCAGACCTGCACAGCCACCACGAGCTACGGGCCAT...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGAGCCGGGATCTCTGTGTaGCGTGGCACCAACACAGGA +
Preference number: 4 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRAGISV*RGTNTG
Trigger: TCCTGTGTTGGTGCCACGCCACACAGAGATCCCGGC...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACGCCGGGATCTCTGTGTaGCGTGGCACCAACACAGGA +
Preference number: 4 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHAGISV*RGTNTG
Trigger: TCCTGTGTTGGTGCCACGCCACACAGAGATCCCGGC...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATCTGGAATATTGCTCTaGGGCTCGATGCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERSGILL*GSMPAG
Trigger: CCCCGCAGGCATCGAGCCCCAGAGCAATATTCCAGA...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GTCACCGGTGATCCTCTACCGGGAGCTAGATCATCTTATATCCCAGGGGGAAGACCTGCGTCCATGCTGTaGTTCATCTGGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: VTGDPLPGARSSYIPGGRPASML*FIWWSL
Trigger: CAGTGACCACCAGATGAACCACAGCATGGACGCAGG...TCTTCCCCCTGGGATATAAGATGATCTAGCTCCCGGTAGAGGATCACCGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGATGGCTGCGAGGCGTaGAATGTCTCCCCGACGCGC +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGDGCEA*NVSPTR
Trigger: GCGCGTCGGGGAGACATTCCACGCCTCGCAGCCATC...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTGATGGCTGCGAGGCGTaGAATGTCTCCCCGACGCGC +
Preference number: 4 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLDGCEA*NVSPTR
Trigger: GCGCGTCGGGGAGACATTCCACGCCTCGCAGCCATC...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TACAACACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCCAGGTTGCATCCTGGTaGGATCTTGCAGACGGTGGC +
Preference number: 4 (lower is better)
Translates to: YNTDNIRTMETSASSLALQVASW*DLADGG
Trigger: GCCACCGTCTGCAAGATCCCACCAGGATGCAACCTG...GAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTGTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTCAGGTTGCATCCTGGTaGGATCTTGCAGACGGTGGC +
Preference number: 4 (lower is better)
Translates to: HQSRRHFLPFKVGPKGKCQVASW*DLADGG
Trigger: GCCACCGTCTGCAAGATCCCACCAGGATGCAACCTG...ACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTGCATGCCATGCACACACCCCTGGTTGACCGACTaGGCCAGGAGGGCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: QIFASSPDYLHTCMPCTHPWLTD*ARRAAN
Trigger: GTTCGCTGCCCTCCTGGCCCAGTCGGTCAACCAGGG...GTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACAACAGCCTCAAAGCCCTaGTTGACCGACTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RHFLPFKVGPKGKCVWQTTASKP*LTDWAR
Trigger: CCTGGCCCAGTCGGTCAACCAGGGCTTTGAGGCTGT...TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGTCCAGCAGGGGGTACTaGTCACAGTCTGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLSSRGY*SQSVSC
Trigger: ACAGGAGACAGACTGTGACCAGTACCCCCTGCTGGA...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGCTTGGGGAGCCCATCTaGGTGAGGACCTTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: FCSLKPPEQTPFLALQSGLGEPI*VRTLSS
Trigger: GCTTGACAAGGTCCTCACCCAGATGGGCTCCCCAAG...CCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACAGGAACAGCGGATGCTTaGGGAGCCCATCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RHFLPFKVGPKGKCVWQTGTADA*GAHLGE
Trigger: CTCACCCAGATGGGCTCCCCAAGCATCCGCTGTTCC...TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAAGGAACAGCGGATGCTTaGGGAGCCCATCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QSYKQPADSSPYISCKDEGTADA*GAHLGE
Trigger: CTCACCCAGATGGGCTCCCCAAGCATCCGCTGTTCC...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGGAGACGCACCCAGTGTaGTGCTGCCTGAGACCAAAT +
Preference number: 4 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVETHPV*CCLRPN
Trigger: ATTTGGTCTCAGGCAGCACCACACTGGGTGCGTCTC...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGCTGGAATCGTACCTaGCTTAGGAGGGGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLSWNRT*LRRGSL
Trigger: CAAGCTCCCCCTCCTAAGCCAGGTACGATTCCAGCT...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681239.1
3UTR CAA 72 bp AAGAAACAGGGTCCAGGGCTAAACGGGTGCACTCTCTaGCTGCTGGTATCCCCCTTGGTGAACAGTCCTACA +
Preference number: 4 (lower is better)
Translates to: KKQGPGLNGCTL*LLVSPLVNSPT
Trigger: TGTAGGACTGTTCACCAAGGGGGATACCAGCAGCAAGAGAGTGCACCCGTTTAGCCCTGGACCCTGTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 72 bp GCTTGGTTCAGAGGACCCTTGTGGAAGGGCCCAGATTaGACTCAGAGCTGTCTGTTTTTACACGCGGCCACT +
Preference number: 4 (lower is better)
Translates to: AWFRGPLWKGPD*TQSCLFLHAAT
Trigger: AGTGGCCGCGTGTAAAAACAGACAGCTCTGAGTCAAATCTGGGCCCTTCCACAAGGGTCCTCTGAACCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 72 bp TCTGTAATGCTTTCACCCCTAGCAAGGGAGTGGGGCTaGGTTCAGAGGACCCTTGTGGAAGGGCCCAGATTT +
Preference number: 4 (lower is better)
Translates to: SVMLSPLAREWG*VQRTLVEGPRF
Trigger: AAATCTGGGCCCTTCCACAAGGGTCCTCTGAACCAAGCCCCACTCCCTTGCTAGGGGTGAAAGCATTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGCCAATCAGTATGTTCTaGGAGGGGAGGGAGACAGAC +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREPISMF*EGRETD
Trigger: GTCTGTCTCCCTCCCCTCTCAGAACATACTGATTGG...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGGGGCCTCCTGCTTCATaGGAACACTTACCGTCATTC +
Preference number: 4 (lower is better)
Translates to: SAHLSHQSRRHFLPFKVGGPPAS*EHLPSF
Trigger: GAATGACGGTAAGTGTTCTCATGAAGCAGGAGGCCC...CCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTGGCTGTGCCCTTGCCTATGTTGGCCTaGGATGTTTCCCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: AEPKSHYTLHQHSELAVPLPMLA*DVSLLV
Trigger: CACCAGAAGGGAAACATCTCAGGCCAACATAGGCAA...GGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCATCCCAGGGGGAAGATaGCAGACCTCTTTGTACCAA +
Preference number: 4 (lower is better)
Translates to: CSLKPPEQTPFLALQSGAIPGGR*QTSLYQ
Trigger: TTGGTACAAAGAGGTCTGTCATCTTCCCCCTGGGAT...GGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAATCCCAGGGGGAAGATaGCAGACCTCTTTGTACCAA +
Preference number: 4 (lower is better)
Translates to: AHLSHQSRRHFLPFKVGPIPGGR*QTSLYQ
Trigger: TTGGTACAAAGAGGTCTGTCATCTTCCCCCTGGGAT...TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCACCCTCTCAGAGGAAGTaGGGGGTTTTGTATTGTCTC +
Preference number: 4 (lower is better)
Translates to: AHLSHQSRRHFLPFKVGPPSQRK*GVLYCL
Trigger: GAGACAATACAAAACCCCTCACTTCCTCTGAGAGGG...TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACGCACAAGCTGCAAGGTaGAGATGTCATGGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHAQAAR*RCHGGE
Trigger: CTCCCCGCCATGACATCTTCACCTTGCAGCTTGTGC...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTCCCCTTCCGATGGGACACCTaGAACCGGCCATCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: NGLSRVPIFSTSCMAIFPFRWDT*NRPSRD
Trigger: GTCCCTGGATGGCCGGTTGCAGGTGTCCCATCGGAA...GGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCAGCTCGTGGTGGCTGTaGAGGTCTGGCCATCGCCAC +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFSSWWL*RSGHRH
Trigger: GTGGCGATGGCCAGACCTGCACAGCCACCACGAGCT...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGGGTCTCTGGAATATTaGTCTGGGGCTCGATGCCTG +
Preference number: 4 (lower is better)
Translates to: FCSLKPPEQTPFLALQSGGSLEY*SGARCL
Trigger: CAGGCATCGAGCCCCAGAGCAATATTCCAGAGACCC...CCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGGAGAACCTGCGTCCATaGTGTGGTTCATCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREENLRP*CGSSGG
Trigger: ACCACCAGATGAACCACAGCATGGACGCAGGTTCTC...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACAGTCACTGAGGCACTCTaGGAAGACCTCCCCTCCGAT +
Preference number: 4 (lower is better)
Translates to: RHFLPFKVGPKGKCVWQTVTEAL*EDLPSD
Trigger: ATCGGAGGGGAGGTCTTCGCAGAGTGCCTCAGTGAC...TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTATCCTGGTGGGATCTTaGAGACGGTGGCCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGILVGS*RRWPGA
Trigger: GGCACCCGGCCACCGTCTGCAAGATCCCACCAGGAT...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTATCCTGGTGGGATCTTaGAGACGGTGGCCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: VFQKTGGCTPSVEGERFLILVGS*RRWPGA
Trigger: GGCACCCGGCCACCGTCTGCAAGATCCCACCAGGAT...AAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTAAAGGCCCATTCAGGTaGAGCTCAATCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: NIRTMETSASSLALMCALKGPFR*SSIQQG
Trigger: CCCCTGCTGGATTGAGCTGCACCTGAATGGGCCTTT...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGAAAAGGCCCATTCAGGTaGAGCTCAATCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERKGPFR*SSIQQG
Trigger: CCCCTGCTGGATTGAGCTGCACCTGAATGGGCCTTT...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCACCTTGTCAAGCCACTaGAAAGGCCCATTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFTLSSH*KGPFRC
Trigger: GCACCTGAATGGGCCTTTGCAGTGGCTTGACAAGGT...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACTGGAACAGCGGATaGTTGGGGAGCCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: VHNIHLWVCSCVSENRWVHWNSG*LGSPSG
Trigger: CCCAGATGGGCTCCCCAAGCATCCGCTGTTCCAGTG...CACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GAGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAGAACACTTACCGCAGACGCCATTTCTTaGCCTTCAAAGTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: ETKCHPTTRASCFMRTLTADAIS*PSKWGQ
Trigger: TTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGC...GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGGCAGACGCCATTTCTTaGCCTTCAAAGTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVADAIS*PSKWGQ
Trigger: TTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGC...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGAAGGTCTGCATGGCCCTaGGGGCTCTTCCTACCTAGA +
Preference number: 4 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRRSAWP*GLFLPR
Trigger: TCTAGGTAGGAAGAGCCCGCAGGGCCATGCAGACCT...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAACGCACCCAGTGTGGTaGTGCCTGAGACCAAATGCC +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKTHPVW*CLRPNA
Trigger: GGCATTTGGTCTCAGGCAGCACCACACTGGGTGCGT...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp ACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGCAGGCCCTCGGAAACTaGTGCCCATGGCTTTTAGGA +
Preference number: 4 (lower is better)
Translates to: TRADAISCPSKWGQRVNVQALGN*CPWLLG
Trigger: TCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTG...CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATTGCGTACGTTTTTCTaGTTTCCCTACCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPLRTFF*FPYPLE
Trigger: CTCAAGTGGGTAGGGAAAGCAGAAAAACGTACGCAA...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCACCTCCCCATGGGAGATaGTTCATCATCATTTTGGAT +
Preference number: 4 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPPPHGR*FIIILD
Trigger: ATCCAAAATGATGATGAAGCATCTCCCATGGGGAGG...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGATTCAGAACTGGCTGTaGCCCAACTCTTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREIQNWL*PNSSSH
Trigger: GTGGCTGGAAGAGTTGGGGCACAGCCAGTTCTGAAT...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGCCAGAACAGCCGAGTTaGAACAGCAGCAGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLPEQPS*NSSSEG
Trigger: ACCTTCACTGCTGCTGTTGCAACTCGGCTGTTCTGG...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GGGGGCTTCCTGTGTAAGAAACAGGCCATAGATCATTTCACACCAGGCACATACGTGGCAGCAGAAGTTTaGGTTTCCGCACGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: GGFLCKKQAIDHFTPGTYVAAEV*VSARGS
Trigger: GCTACCCCGTGCGGAAACCCAAACTTCTGCTGCCAC...GTATGTGCCTGGTGTGAAATGATCTATGGCCTGTTTCTTACACAGGAAGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR CCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTATGGCCCGTAGCTCGTaGTGGCTGTGCAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGMARSS*WLCRSG
Trigger: GCCAGACCTGCACAGCCACCACGAGCTACGGGCCAT...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAGAGAGAACTCACACAGCTCCATaGCCCGTAGCTCGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: AGRYLFNKTWKSFTSGERTHTAP*PVARGG
Trigger: GCCACCACGAGCTACGGGCCATGGAGCTGTGTGAGT...TCTCTCTCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCGCTGTAGTCGTCCAGTaGGGGGAACTCGGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFAVVVQ*GELGRD
Trigger: ATCCCGGCCGAGTTCCCCCCACTGGACGACTACAGC...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGCTGTAGTCGTCCAGTaGGGGGAACTCGGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGAVVVQ*GELGRD
Trigger: ATCCCGGCCGAGTTCCCCCCACTGGACGACTACAGC...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACTCTGGAATATTGCTCTaGGGCTCGATGCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHSGILL*GSMPAG
Trigger: CCCCGCAGGCATCGAGCCCCAGAGCAATATTCCAGA...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGCAGGTAGCCAGGGGGTaGGGTCTCTGGAATATTGCT +
Preference number: 4 (lower is better)
Translates to: FCSLKPPEQTPFLALQSGQVARG*GLWNIA
Trigger: AGCAATATTCCAGAGACCCCACCCCCTGGCTACCTG...CCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTCCTGCGTCCATGCTGTaGTTCATCTGGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: HQSRRHFLPFKVGPKGKCPASML*FIWWSL
Trigger: CAGTGACCACCAGATGAACCACAGCATGGACGCAGG...ACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGACCTGCGTCCATGCTGTaGTTCATCTGGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERPASML*FIWWSL
Trigger: CAGTGACCACCAGATGAACCACAGCATGGACGCAGG...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCATCCACAGTCATGGATaGCTGCGAGGCGTGGAATGT +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFIHSHG*LRGVEC
Trigger: ACATTCCACGCCTCGCAGCCATCCATGACTGTGGAT...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAAGCCATCCACAGTCATaGATGGCTGCGAGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKSHPQS*MAARRG
Trigger: TCCACGCCTCGCAGCCATCCATGACTGTGGATGGCT...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAACAGGTTGCATCCTGGTaGGATCTTGCAGACGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKQVASW*DLADGG
Trigger: GCCACCGTCTGCAAGATCCCACCAGGATGCAACCTG...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTCTTCAGGTTGCATCCTaGTGGGATCTTGCAGACGGT +
Preference number: 4 (lower is better)
Translates to: LSHQSRRHFLPFKVGPKGLQVAS*WDLADG
Trigger: ACCGTCTGCAAGATCCCACCAGGATGCAACCTGAAG...ACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCCTTCAGGTTGCATCCTaGTGGGATCTTGCAGACGGT +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFLQVAS*WDLADG
Trigger: ACCGTCTGCAAGATCCCACCAGGATGCAACCTGAAG...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGCTTCAGGTTGCATCCTaGTGGGATCTTGCAGACGGT +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLRELQVAS*WDLADG
Trigger: ACCGTCTGCAAGATCCCACCAGGATGCAACCTGAAG...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCCCCTGGTTGACCGACTaGGCCAGGAGGGCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: FFLDNNGLSRVPIFSTSCPWLTD*ARRAAN
Trigger: GTTCGCTGCCCTCCTGGCCCAGTCGGTCAACCAGGG...GCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACACCCTGGTTGACCGACTaGGCCAGGAGGGCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTPWLTD*ARRAAN
Trigger: GTTCGCTGCCCTCCTGGCCCAGTCGGTCAACCAGGG...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACAGCCTCAAAGCCCTaGTTGACCGACTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCTASKP*LTDWAR
Trigger: CCTGGCCCAGTCGGTCAACCAGGGCTTTGAGGCTGT...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCATGACTGCTCTAGCACGAAGCTCATGCGGATaGTGCACATTCGGGTCAACT +
Preference number: 4 (lower is better)
Translates to: PRKLLPMAFRRGTMTALARSSCG*CTFGST
Trigger: AGTTGACCCGAATGTGCACCATCCGCATGAGCTTCG...TGCTAGAGCAGTCATGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGCGAAGCTCATGCGGATaGTGCACATTCGGGTCAACT +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLRERSSCG*CTFGST
Trigger: AGTTGACCCGAATGTGCACCATCCGCATGAGCTTCG...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAACTTGGGGAGCCCATCTaGGTGAGGACCTTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKLGEPI*VRTLSS
Trigger: GCTTGACAAGGTCCTCACCCAGATGGGCTCCCCAAG...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGGAACAGCGGATGCTTaGGGAGCCCATCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWGTADA*GAHLGE
Trigger: CTCACCCAGATGGGCTCCCCAAGCATCCGCTGTTCC...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTCCCCGGAACAGCGGATGCTTaGGGAGCCCATCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: NGLSRVPIFSTSCMAIFPGTADA*GAHLGE
Trigger: CTCACCCAGATGGGCTCCCCAAGCATCCGCTGTTCC...GGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTGGGGCGGGGCTGGGCTaGGAATGTTCACTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VFQKTGGCTPSVEGERFLGAGLG*ECSLEE
Trigger: CTCTTCCAGTGAACATTCCCAGCCCAGCCCCGCCCC...AAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCGGTCTCAGAGCTGGCTaGGAACATGAACACATGTAC +
Preference number: 4 (lower is better)
Translates to: CSLKPPEQTPFLALQSGAGLRAG*EHEHMY
Trigger: GTACATGTGTTCATGTTCCCAGCCAGCTCTGAGACC...GGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCATGACTGCTCTAGCAGGAATATTTGGTTCCTaGGTCTCAGAGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PRKLLPMAFRRGTMTALAGIFGS*VSELAG
Trigger: CCCAGCCAGCTCTGAGACCCAGGAACCAAATATTCC...TGCTAGAGCAGTCATGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGAGCCTGCCAGGAAGGTaGCCAACTGAGATGATGTTC +
Preference number: 4 (lower is better)
Translates to: SAHLSHQSRRHFLPFKVGSLPGR*PTEMMF
Trigger: GAACATCATCTCAGTTGGCCACCTTCCTGGCAGGCT...CCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGGTAAGGACGAAGGAGTaGTGTAACCTGAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: TRADAISCPSKWGQRVNVVRTKE*CNLSSG
Trigger: GCCGGAGCTCAGGTTACACCACTCCTTCGTCCTTAC...CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCTTCAGAGGACCCTTGTaGAAGGGCCCAGATTTGACT +
Preference number: 4 (lower is better)
Translates to: CSLKPPEQTPFLALQSGAFRGPL*KGPDLT
Trigger: AGTCAAATCTGGGCCCTTCCACAAGGGTCCTCTGAA...GGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CATGGCCCTGCGGGCTCTTCCTACCTAGAACGCCCTTCCAAGGTGAACTCCACAATTAACAACCAGAGCTaGAACCAAATCCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: HGPAGSSYLERPSKVNSTINNQS*NQIPGL
Trigger: GAGACCTGGGATTTGGTTCCAGCTCTGGTTGTTAAT...TGTGGAGTTCACCTTGGAAGGGCGTTCTAGGTAGGAAGAGCCCGCAGGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679624.1
CDS-3UTR TCA 90 bp GGGGGCCGGTGGTGTAATACTACCTGTTCTGCTCACTTAAGCCACCAGAGCAGACGTCCTTCTTCATATTaGAGGCGAACTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: GGRWCNTTCSAHLSHQSRRPSSY*RRTHTA
Trigger: AGCTGTGTGAGTTCGCCTTCAATATGAAGAAGGACG...TCTGCTCTGGTGGCTTAAGTGAGCAGAACAGGTAGTATTACACCACCGGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGAAATTGGAGGGGTCGGTaGAGCCATCCACAGTCATGG +
Preference number: 4 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRNWRGR*SHPQSW
Trigger: CCATGACTGTGGATGGCTTCACCGACCCCTCCAATT...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCTTTCTGGTTGGACTGTaGCATCCCAGAAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: CSLKPPEQTPFLALQSGAFLVGL*HPRKLS
Trigger: TGACAGCTTTCTGGGATGTCACAGTCCAACCAGAAA...GGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GGGGGCCGGTGGTGTAATACTACCTGTTCTGCTCACTTAAGCCACCAGAGCAGATTTCTGGTTGGACTGTaGCATCCCAGAAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GGRWCNTTCSAHLSHQSRFLVGL*HPRKLS
Trigger: TGACAGCTTTCTGGGATGTCACAGTCCAACCAGAAA...TCTGCTCTGGTGGCTTAAGTGAGCAGAACAGGTAGTATTACACCACCGGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACGCAAGCTCTTACAGATaGCTGGAGACGCACCCAGTG +
Preference number: 4 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHASSYR*LETHPV
Trigger: CACTGGGTGCGTCTCCAGTCATCTGTAAGAGCTTGC...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTGGTGGCCAACTGAGATaGTGTTCCAGCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFGGQLR*CSSTGL
Trigger: CAGGCCTGTGCTGGAACATCATCTCAGTTGGCCACC...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACCTGTGGAGACCCTCATaGGGCCTGAGGCTAAGAATG +
Preference number: 4 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHLWRPS*GLRLRM
Trigger: CATTCTTAGCCTCAGGCCTCATGAGGGTCTCCACAG...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCCACTTGAGAAGCGGCTaGTGCTCCTTAAACTGTGAT +
Preference number: 4 (lower is better)
Translates to: CSLKPPEQTPFLALQSGAHLRSG*CSLNCD
Trigger: ATCACAGTTTAAGGAGCATCAGCCGCTTCTCAAGTG...GGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGGGAAGGGCCCAGATTTaGCTCAGAGCTGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVGRAQI*LRAVCF
Trigger: AAAACAGACAGCTCTGAGTCAAATCTGGGCCCTTCC...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAATCCAGCTCGTCCAGCTaGCCCGTCTTCTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: QSYKQPADSSPYISCKDESSSSS*PVFLSF
Trigger: GAAACTCAAGAAGACGGGGCAGCTGGACGAGCTGGA...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR GCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCTTCCGATGGGACACCTaGAACCGGCCATCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFFRWDT*NRPSRD
Trigger: GTCCCTGGATGGCCGGTTGCAGGTGTCCCATCGGAA...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTTTCCGATGGGACACCTaGAACCGGCCATCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: VFQKTGGCTPSVEGERFLFRWDT*NRPSRD
Trigger: GTCCCTGGATGGCCGGTTGCAGGTGTCCCATCGGAA...AAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCATGTCAGCTCCACTGCTaGATTCCTGTTGACATTGGA +
Preference number: 4 (lower is better)
Translates to: AHLSHQSRRHFLPFKVGPCQLHC*IPVDIG
Trigger: TCCAATGTCAACAGGAATGCAGCAGTGGAGCTGACA...TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCGTGTCAGCTCCACTaGTGCATTCCTGTTGACATT +
Preference number: 4 (lower is better)
Translates to: SAHLSHQSRRHFLPFKVGPCQLH*CIPVDI
Trigger: AATGTCAACAGGAATGCAGCAGTGGAGCTGACACGG...CCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTCACTGAGGCACTCTaGGAAGACCTCCCCTCCGAT +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWVTEAL*EDLPSD
Trigger: ATCGGAGGGGAGGTCTTCGCAGAGTGCCTCAGTGAC...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CTACAAGGGAACATCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTTGAGGGTCACTGAGGCACTCTaGGAAGACCTCCCCTCCGAT +
Preference number: 4 (lower is better)
Translates to: LQGNIFATQRQYSFAVLRVTEAL*EDLPSD
Trigger: ATCGGAGGGGAGGTCTTCGCAGAGTGCCTCAGTGAC...CCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTAGCTCATGCGGATGGTaGACATTCGGGTCAACTGGT +
Preference number: 4 (lower is better)
Translates to: NIRTMETSASSLALMCALSSCGW*TFGSTG
Trigger: ACCAGTTGACCCGAATGTGCACCATCCGCATGAGCT...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGAAAAGGCCCATTCAGGTaGAGCTCAATCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRKGPFR*SSIQQG
Trigger: CCCCTGCTGGATTGAGCTGCACCTGAATGGGCCTTT...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGACAGAAAACAGGTGGGTaGACCCCTTCAGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERQKTGG*TPSVEG
Trigger: TCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTG...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGCAGAAAACAGGTGGGTaGACCCCTTCAGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: FCSLKPPEQTPFLALQSGQKTGG*TPSVEG
Trigger: TCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTG...CCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGACTATACATTGCATATaGACTGGGCCTCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: SRWIMQALGNCCPWLLGETIHCI*TGPQQI
Trigger: GATCTGCTGAGGCCCAGTGCATATGCAATGTATAGT...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCAATAGACACTATACATTaGATATGCACTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPIDTIH*ICTGPQ
Trigger: CTGAGGCCCAGTGCATATGCAATGTATAGTGTCTAT...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTACGCACCCAGTGTGGTaGTGCCTGAGACCAAATGCC +
Preference number: 4 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSTHPVW*CLRPNA
Trigger: GGCATTTGGTCTCAGGCAGCACCACACTGGGTGCGT...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GAGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAGAACACTTACCACAAGTCTGTCAAGGTaGTCCTTCCGTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ETKCHPTTRASCFMRTLTTSLSR*SFRLFL
Trigger: CAGGAAGAGACGGAAGGAGCACCTTGACAGACTTGT...GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTACAAGTCTGTCAAGGTaGTCCTTCCGTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LSHQSRRHFLPFKVGPKGTSLSR*SFRLFL
Trigger: CAGGAAGAGACGGAAGGAGCACCTTGACAGACTTGT...ACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAAGCCCTCGGAAACTGCTaGCCATGGCTTTTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: QSYKQPADSSPYISCKDEALGNC*PWLLGE
Trigger: CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGC...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GGGGGCCGGTGGTGTAATACTACCTGTTCTGCTCACTTAAGCCACCAGAGCAGAGCCCTGGTTTCCTCTTaGCCTTTTCAACTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: GGRWCNTTCSAHLSHQSRALVSS*PFQLSF
Trigger: AAAGGACAGTTGAAAAGGGCAAGAGGAAACCAGGGC...TCTGCTCTGGTGGCTTAAGTGAGCAGAACAGGTAGTATTACACCACCGGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGACCAGAACAGCCGAGTTaGAACAGCAGCAGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERPEQPS*NSSSEG
Trigger: ACCTTCACTGCTGCTGTTGCAACTCGGCTGTTCTGG...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCCCGGTGTACCAGAGCTaGGCCTTTCCACGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCPVYQS*AFPRLP
Trigger: AGGCAAACGTGGAAAGGCGCAGCTCTGGTACACCGG...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439724.7
CDS-3UTR CCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGCCCGTAGCTCGTGGTaGCTGTGCAGGTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTARSSW*LCRSGH
Trigger: ATGGCCAGACCTGCACAGCCACCACGAGCTACGGGC...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGAAGTGCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAACTCACACAGCTCCATaGCCCGTAGCTCGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSAGRYLFNKTWKSFTSGTHTAP*PVARGG
Trigger: GCCACCACGAGCTACGGGCCATGGAGCTGTGTGAGT...TCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGCACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGCCGGGATCTCTGTGTaGCGTGGCACCAACACAGGA +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGAGISV*RGTNTG
Trigger: TCCTGTGTTGGTGCCACGCCACACAGAGATCCCGGC...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAACAGGTAGCCAGGGGGTaGGGTCTCTGGAATATTGCT +
Preference number: 4 (lower is better)
Translates to: QSYKQPADSSPYISCKDEQVARG*GLWNIA
Trigger: AGCAATATTCCAGAGACCCCACCCCCTGGCTACCTG...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAACAGGTAGCCAGGGGGTaGGGTCTCTGGAATATTGCT +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKQVARG*GLWNIA
Trigger: AGCAATATTCCAGAGACCCCACCCCCTGGCTACCTG...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GGGGGCCGGTGGTGTAATACTACCTGTTCTGCTCACTTAAGCCACCAGAGCAGACAAGTTATTATGTGCTaGGGACATCGGATTCGGGGA +
Preference number: 4 (lower is better)
Translates to: GGRWCNTTCSAHLSHQSRQVIMC*GHRIRG
Trigger: TCCCCGAATCCGATGTCCCCAGCACATAATAACTTG...TCTGCTCTGGTGGCTTAAGTGAGCAGAACAGGTAGTATTACACCACCGGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGCTCGTAGTAGGAGATaGAGCACCAGAAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWARSRR*STRRPA
Trigger: AGCCGGCCTTCTGGTGCTCCATCTCCTACTACGAGC...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTCCCCGCTCGTAGTAGGAGATaGAGCACCAGAAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: NGLSRVPIFSTSCMAIFPARSRR*STRRPA
Trigger: AGCCGGCCTTCTGGTGCTCCATCTCCTACTACGAGC...GGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGAGCCATCCACAGTCATaGATGGCTGCGAGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWSHPQS*MAARRG
Trigger: TCCACGCCTCGCAGCCATCCATGACTGTGGATGGCT...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGACTTCAGGTTGCATCCTaGTGGGATCTTGCAGACGGT +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERLQVAS*WDLADG
Trigger: ACCGTCTGCAAGATCCCACCAGGATGCAACCTGAAG...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTCTTCAGGTTGCATCCTaGTGGGATCTTGCAGACGGT +
Preference number: 4 (lower is better)
Translates to: HQSRRHFLPFKVGPKGKCLQVAS*WDLADG
Trigger: ACCGTCTGCAAGATCCCACCAGGATGCAACCTGAAG...ACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGAAGTGCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAACAGCCTCAAAGCCCTaGTTGACCGACTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RSAGRYLFNKTWKSFTSGTASKP*LTDWAR
Trigger: CCTGGCCCAGTCGGTCAACCAGGGCTTTGAGGCTGT...TCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGCACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTACAGCCTCAAAGCCCTaGTTGACCGACTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VFQKTGGCTPSVEGERFLTASKP*LTDWAR
Trigger: CCTGGCCCAGTCGGTCAACCAGGGCTTTGAGGCTGT...AAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACATCCAGCAGGGGGTACTaGTCACAGTCTGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RHFLPFKVGPKGKCVWQTSSRGY*SQSVSC
Trigger: ACAGGAGACAGACTGTGACCAGTACCCCCTGCTGGA...TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCTTGGGGAGCCCATCTaGGTGAGGACCTTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: VHNIHLWVCSCVSENRWVLGEPI*VRTLSS
Trigger: GCTTGACAAGGTCCTCACCCAGATGGGCTCCCCAAG...CACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCGGAACAGCGGATGCTTaGGGAGCCCATCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFGTADA*GAHLGE
Trigger: CTCACCCAGATGGGCTCCCCAAGCATCCGCTGTTCC...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGAGTCTCTAAGACACACTaGAACAGCGGATGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERVSKTH*NSGCLG
Trigger: CCCCAAGCATCCGCTGTTCCAGTGTGTCTTAGAGAC...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGATCTCCACCTCCTGCATaGCCATTTTCCCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRSPPPA*PFSPSL
Trigger: CAGGCTTGGGGAAAATGGCCATGCAGGAGGTGGAGA...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GGGGGCCGGTGGTGTAATACTACCTGTTCTGCTCACTTAAGCCACCAGAGCAGATCTTGCCCTTCAAAGTaGGGCCAAAGGGTAAATGTG +
Preference number: 4 (lower is better)
Translates to: GGRWCNTTCSAHLSHQSRSCPSK*GQRVNV
Trigger: CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGA...TCTGCTCTGGTGGCTTAAGTGAGCAGAACAGGTAGTATTACACCACCGGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCGGGGGAGGGGGCCGGTaGTGTAATACTACCTGTTCT +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCGGGGR*CNTTCS
Trigger: AGAACAGGTAGTATTACACCACCGGCCCCCTCCCCC...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAGAGAGAGGGGGAGGGGGCCGGTaGTGTAATACTACCTGTTCT +
Preference number: 4 (lower is better)
Translates to: AGRYLFNKTWKSFTSGERGGGGR*CNTTCS
Trigger: AGAACAGGTAGTATTACACCACCGGCCCCCTCCCCC...TCTCTCTCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGACAGAGGGGTGTTTCTaGTTGGACTGTGACATCCCA +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLRETEGCF*LDCDIP
Trigger: TGGGATGTCACAGTCCAACCAGAAACACCCCTCTGT...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCGCTGGGAATGTTCACTaGAAGAGGCACTGTCACAAG +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFAGNVH*KRHCHK
Trigger: CTTGTGACAGTGCCTCTTCCAGTGAACATTCCCAGC...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TACAACACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCGAGAGAAGCAGTTGCTaGGTCTCACTCAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: YNTDNIRTMETSASSLALERSSC*VSLRFP
Trigger: GGGAAACCTGAGTGAGACCCAGCAACTGCTTCTCTC...GAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTGTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCATGACTGCTCTAGCAGGTCTCAGAGCTGGCTaGGAACATGAACACATGTAC +
Preference number: 4 (lower is better)
Translates to: PRKLLPMAFRRGTMTALAGLRAG*EHEHMY
Trigger: GTACATGTGTTCATGTTCCCAGCCAGCTCTGAGACC...TGCTAGAGCAGTCATGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGATCGTGCAGCAGGTaGATCATGCAGGCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGGSCSR*IMQALG
Trigger: TCCGAGGGCCTGCATGATCCACCTGCTGCACGATCC...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CATGGCCCTGCGGGCTCTTCCTACCTAGAACGCCCTTCCAAGGTGAACTCCACATCTAAGTTACTAAATTaGGAAGAAGCGAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: HGPAGSSYLERPSKVNSTSKLLN*EEARWG
Trigger: TCCCCACCTCGCTTCTTCCCAATTTAGTAACTTAGA...TGTGGAGTTCACCTTGGAAGGGCGTTCTAGGTAGGAAGAGCCCGCAGGGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GAGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAGAACACTTACCACCAACATTCAGAACTaGCTGTGCCCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: ETKCHPTTRASCFMRTLTTNIQN*LCPNSS
Trigger: GGAAGAGTTGGGGCACAGCCAGTTCTGAATGTTGGT...GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGTTAGCCAGCCTGGTTTaGTGTTTCTGGATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLRELASLV*CFWMLS
Trigger: GCTCAGCATCCAGAAACACCAAACCAGGCTGGCTAA...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTCAGGTAGCCAGGGGGTaGGGTCTCCGCGGGACGCCA +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIQVARG*GLRGTP
Trigger: TGGCGTCCCGCGGAGACCCCACCCCCTGGCTACCTG...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537194.6
CDS-3UTR CCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGGGGCCTTTCCTGGTaGGATCTTGCAGACGGTGGC +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTGGLSW*DLADGG
Trigger: GCCACCGTCTGCAAGATCCCACCAGGAAAGGCCCCC...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560424.1
CDS-3UTR CCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTTCCTGCAAGGGGAGATaGAAGGCTGGCCCACAAGCT +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFSCKGR*KAGPQA
Trigger: AGCTTGTGGGCCAGCCTTCCATCTCCCCTTGCAGGA...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000560424.1
CDS-3UTR TCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGAATTGGAGGGGTCGGTaGAGCCATCCACAGTCATGG +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWNWRGR*SHPQSW
Trigger: CCATGACTGTGGATGGCTTCACCGACCCCTCCAATT...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CTACAAGGGAACATCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTTGAGGAATTGGAGGGGTCGGTaGAGCCATCCACAGTCATGG +
Preference number: 4 (lower is better)
Translates to: LQGNIFATQRQYSFAVLRNWRGR*SHPQSW
Trigger: CCATGACTGTGGATGGCTTCACCGACCCCTCCAATT...CCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGGTGCACCCCTTCAGTTaGGGGAGAAAGATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREVHPFS*GRKISS
Trigger: AGAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCAC...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTAACGCCCTTCCAAGGTaGACTCCACACTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFNALPR*TPHCSP
Trigger: AGGACTGCAGTGTGGAGTTCACCTTGGAAGGGCGTT...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTGTGTGCAGGTTCTGCTaGACACGCACCTCCCAATCA +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFVCRFC*TRTSQS
Trigger: TGATTGGGAGGTGCGTGTTCAGCAGAACCTGCACAC...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCCAGTGTGGTGCTGCCTaGGACCAAATGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFQCGAA*DQMPSH
Trigger: GTGGGATGGCATTTGGTCTCAGGCAGCACCACACTG...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTACAGGACCCTGCAGATaGGGCATCAGGAAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGTGPCR*GIRKPL
Trigger: GAGAGGCTTCCTGATGCCTCATCTGCAGGGTCCTGT...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGAAGCTGGCTGGGAACATaGACACATGTACAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERSWLGT*THVQEV
Trigger: AACCTCCTGTACATGTGTTCATGTTCCCAGCCAGCT...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGCAAATTTATTTTCAGTaGTGCCACAGGTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: SRWIMQALGNCCPWLLGEQIYFQ*CHRWVC
Trigger: GCAAACCCACCTGTGGCATCACTGAAAATAAATTTG...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGGTCGTGTTGACTAGGTaGACGCCACTTAAAACTGCT +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREVVLTR*TPLKTA
Trigger: AGCAGTTTTAAGTGGCGTTCACCTAGTCAACACGAC...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAACTCCTTGGAAGGTGCTaGAGACAAGGATCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKLLGRC*RQGSVS
Trigger: GGACACAGATCCTTGTCTTCAGCACCTTCCAAGGAG...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGTGGCCAACTGAGATaGTGTTCCAGCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGGGQLR*CSSTGL
Trigger: CAGGCCTGTGCTGGAACATCATCTCAGTTGGCCACC...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCCTGTGGAGACCCTCATaGGGCCTGAGGCTAAGAATG +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCLWRPS*GLRLRM
Trigger: CATTCTTAGCCTCAGGCCTCATGAGGGTCTCCACAG...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTTGGTATCCCCCTTGGTaGACAGTCCTACAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFWYPPW*TVLQAA
Trigger: GGCTGCTTGTAGGACTGTTCACCAAGGGGGATACCA...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACAGTGAAGACGGTTACCTaGAAGGGGCCTACAAGGGAA +
Preference number: 4 (lower is better)
Translates to: RHFLPFKVGPKGKCVWQTVKTVT*KGPTRE
Trigger: TTCCCTTGTAGGCCCCTTTCAGGTAACCGTCTTCAC...TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCTCCTCCTTAACACTCTaGCCCAAGCACACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCSSLTL*PKHTGL
Trigger: CAGGCCTGTGTGCTTGGGTCAGAGTGTTAAGGAGGA...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537194.6
CDS-3UTR GCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTGGGTCTCTGGAATATTaGTCTGGGGCTCGATGCCTG +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFGSLEY*SGARCL
Trigger: CAGGCATCGAGCCCCAGAGCAATATTCCAGAGACCC...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGAGAGAACCTGCGTCCATaGTGTGGTTCATCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRENLRP*CGSSGG
Trigger: ACCACCAGATGAACCACAGCATGGACGCAGGTTCTC...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCATGACTGCTCTAGCAGTCCAAGTTATTATGTaGTGGGGACATCGGATTCGG +
Preference number: 4 (lower is better)
Translates to: PRKLLPMAFRRGTMTALAVQVIM*WGHRIR
Trigger: CCGAATCCGATGTCCCCAGCACATAATAACTTGGAC...TGCTAGAGCAGTCATGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCGTCACTGAGGCACTCTaGGAAGACCTCCCCTCCGAT +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFVTEAL*EDLPSD
Trigger: ATCGGAGGGGAGGTCTTCGCAGAGTGCCTCAGTGAC...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACAACCTTGTCAAGCCACTaGAAAGGCCCATTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: RHFLPFKVGPKGKCVWQTTLSSH*KGPFRC
Trigger: GCACCTGAATGGGCCTTTGCAGTGGCTTGACAAGGT...TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GGGGGCTTCCTGTGTAAGAAACAGGCCATAGATCATTTCACACCAGGCACATACACCTTGTCAAGCCACTaGAAAGGCCCATTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GGFLCKKQAIDHFTPGTYTLSSH*KGPFRC
Trigger: GCACCTGAATGGGCCTTTGCAGTGGCTTGACAAGGT...GTATGTGCCTGGTGTGAAATGATCTATGGCCTGTTTCTTACACAGGAAGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACCAGAAAACAGGTGGGTaGACCCCTTCAGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHQKTGG*TPSVEG
Trigger: TCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTG...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGAGCAGACGCCATTTCTTaGCCTTCAAAGTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRADAIS*PSKWGQ
Trigger: TTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGC...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTGGCTGTGCCCACTATACATTGCATATaGACTGGGCCTCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: AEPKSHYTLHQHSELAVPTIHCI*TGPQQI
Trigger: GATCTGCTGAGGCCCAGTGCATATGCAATGTATAGT...GGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCAAGTTTTCTCCCTAATTaGTGCTGGGAGCAGTACTTG +
Preference number: 4 (lower is better)
Translates to: WIMQALGNCCPWLLGEEPSFLPN*CWEQYL
Trigger: CAAGTACTGCTCCCAGCAGCAATTAGGGAGAAAACT...TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTCAGGCCCTCGGAAACTaGTGCCCATGGCTTTTAGGA +
Preference number: 4 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSQALGN*CPWLLG
Trigger: TCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTG...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GAGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAGAACACTTACCAGTCTCAGCACAAGCTaGAAGGTGAAGATGTCATGG +
Preference number: 4 (lower is better)
Translates to: ETKCHPTTRASCFMRTLTSLSTS*KVKMSW
Trigger: CCATGACATCTTCACCTTGCAGCTTGTGCTGAGACT...GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGTGTCCCAGTGCTAGCTaGACTTGGGTCAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWCPSAS*TWVSLS
Trigger: GCTGAGACTGACCCAAGTGCAGCTAGCACTGGGACA...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGTGTCCCAGTGCTAGCTaGACTTGGGTCAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: VHNIHLWVCSCVSENRWVCPSAS*TWVSLS
Trigger: GCTGAGACTGACCCAAGTGCAGCTAGCACTGGGACA...CACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCGTCAGGTCTACAGCCTaGCAGGAAGGTGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFVRSTA*QEGGQL
Trigger: CAGTTGGCCACCTTCCTGGCAGGCTGTAGACCTGAC...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTGGCTGTGCCCCATACGTGCATGCCATaGACACACTACTTCAAACCT +
Preference number: 4 (lower is better)
Translates to: AEPKSHYTLHQHSELAVPHTCMP*THYFKP
Trigger: AGGTTTGAAGTAGTGTGTGCATGGCATGCACGTATG...GGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AGAAGTGCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAACGGGTGCACTCTCTTaGTGCTGGTATCCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: RSAGRYLFNKTWKSFTSGTGALS*CWYPPW
Trigger: CCAAGGGGGATACCAGCAGCAAGAGAGTGCACCCGT...TCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGCACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAACCAGAACAGCCGAGTTaGAACAGCAGCAGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKPEQPS*NSSSEG
Trigger: ACCTTCACTGCTGCTGTTGCAACTCGGCTGTTCTGG...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCCCTCCCCATCCACCATaGTTTCCGGTGTACCAGAGC +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFPPHPP*FPVYQS
Trigger: GCTCTGGTACACCGGAAAGCATGGTGGATGGGGAGG...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439724.7
CDS-3UTR GCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGAAATAAATTACCCCAGTaGCGCGGCTCTTGCCCACAT +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERNKLPQ*RGSCPH
Trigger: ATGTGGGCAAGAGCCGCGGCACTGGGGTAATTTATT...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS-3UTR GCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGGCAGGTGATGCAAGCTaGTTTCCATACCAAACCCTA +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREAGDAS*FPYQTL
Trigger: TAGGGTTTGGTATGGAAAGCAGCTTGCATCACCTGC...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681239.1
CDS-3UTR CCA 90 bp CTTGCCAAAAGTATATACACTTCCTTCCCTTCACCTGGAATAAAGCAGGACTTCGCCCGTAGCTCGTGGTaGCTGTGCAGGTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LAKSIYTSFPSPGIKQDFARSSW*LCRSGH
Trigger: ATGGCCAGACCTGCACAGCCACCACGAGCTACGGGC...GAAGTCCTGCTTTATTCCAGGTGAAGGGAAGGAAGTGTATATACTTTTGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CTTGCCAAAAGTATATACACTTCCTTCCCTTCACCTGGAATAAAGCAGGACTTCGCTGTAGTCGTCCAGTaGGGGGAACTCGGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: LAKSIYTSFPSPGIKQDFAVVVQ*GELGRD
Trigger: ATCCCGGCCGAGTTCCCCCCACTGGACGACTACAGC...GAAGTCCTGCTTTATTCCAGGTGAAGGGAAGGAAGTGTATATACTTTTGGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTTCTGGAATATTGCTCTaGGGCTCGATGCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGSGILL*GSMPAG
Trigger: CCCCGCAGGCATCGAGCCCCAGAGCAATATTCCAGA...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCTCTGGAATATTGCTCTaGGGCTCGATGCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFSGILL*GSMPAG
Trigger: CCCCGCAGGCATCGAGCCCCAGAGCAATATTCCAGA...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTCCCCCAGGTAGCCAGGGGGTaGGGTCTCTGGAATATTGCT +
Preference number: 4 (lower is better)
Translates to: NGLSRVPIFSTSCMAIFPQVARG*GLWNIA
Trigger: AGCAATATTCCAGAGACCCCACCCCCTGGCTACCTG...GGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCATGCTGTGGTTCATCTaGTGGTCACTGGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFMLWFI*WSLVSP
Trigger: TGGAGAAACCAGTGACCACCAGATGAACCACAGCAT...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGATGCTGTGGTTCATCTaGTGGTCACTGGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLMLWFI*WSLVSP
Trigger: TGGAGAAACCAGTGACCACCAGATGAACCACAGCAT...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGCCTGCGTCCATGCTGTaGTTCATCTGGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWPASML*FIWWSL
Trigger: CAGTGACCACCAGATGAACCACAGCATGGACGCAGG...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCCTGCGTCCATGCTGTaGTTCATCTGGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFPASML*FIWWSL
Trigger: CAGTGACCACCAGATGAACCACAGCATGGACGCAGG...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTCTCGCAGTAGGTAACTaGCTGCAGGTCCAAGTTATT +
Preference number: 4 (lower is better)
Translates to: LSHQSRRHFLPFKVGPKGLAVGN*LQVQVI
Trigger: AATAACTTGGACCTGCAGCCAGTTACCTACTGCGAG...ACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAATCCACAGTCATGGATaGCTGCGAGGCGTGGAATGT +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKIHSHG*LRGVEC
Trigger: ACATTCCACGCCTCGCAGCCATCCATGACTGTGGAT...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACGAAGCTCATGCGGATaGTGCACATTCGGGTCAACT +
Preference number: 4 (lower is better)
Translates to: RHFLPFKVGPKGKCVWQTRSSCG*CTFGST
Trigger: AGTTGACCCGAATGTGCACCATCCGCATGAGCTTCG...TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAACGAAGCTCATGCGGATaGTGCACATTCGGGTCAACT +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKRSSCG*CTFGST
Trigger: AGTTGACCCGAATGTGCACCATCCGCATGAGCTTCG...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGAACAGCGGATGCTTaGGGAGCCCATCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTGTADA*GAHLGE
Trigger: CTCACCCAGATGGGCTCCCCAAGCATCCGCTGTTCC...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGTCTCCACCTCCTGCATaGCCATTTTCCCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: VHNIHLWVCSCVSENRWVSPPPA*PFSPSL
Trigger: CAGGCTTGGGGAAAATGGCCATGCAGGAGGTGGAGA...CACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCTCTCCACCTCCTGCATaGCCATTTTCCCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCSPPPA*PFSPSL
Trigger: CAGGCTTGGGGAAAATGGCCATGCAGGAGGTGGAGA...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTTCTCCACCTCCTGCATaGCCATTTTCCCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSSPPPA*PFSPSL
Trigger: CAGGCTTGGGGAAAATGGCCATGCAGGAGGTGGAGA...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGTCTTGCCCTTCAAAGTaGGGCCAAAGGGTAAATGTG +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLRESCPSK*GQRVNV
Trigger: CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGA...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGGGGTGTTTCTGGTTaGACTGTGACATCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFRGVSG*TVTSQK
Trigger: TTTCTGGGATGTCACAGTCCAACCAGAAACACCCCT...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGAGGGGTGTTTCTGGTTaGACTGTGACATCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVRGVSG*TVTSQK
Trigger: TTTCTGGGATGTCACAGTCCAACCAGAAACACCCCT...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGCTGGGAATGTTCACTaGAAGAGGCACTGTCACAAG +
Preference number: 4 (lower is better)
Translates to: HQSRRHFLPFKVGPKGKCAGNVH*KRHCHK
Trigger: CTTGTGACAGTGCCTCTTCCAGTGAACATTCCCAGC...ACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGAACATTGCATATGCACTaGGCCTCAGCAGATCCTTCC +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERTLHMH*ASADPS
Trigger: GGAAGGATCTGCTGAGGCCCAGTGCATATGCAATGT...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGAGACGCACCCAGTGTaGTGCTGCCTGAGACCAAAT +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWETHPV*CCLRPN
Trigger: ATTTGGTCTCAGGCAGCACCACACTGGGTGCGTCTC...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTGAGACGCACCCAGTGTaGTGCTGCCTGAGACCAAAT +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFETHPV*CCLRPN
Trigger: ATTTGGTCTCAGGCAGCACCACACTGGGTGCGTCTC...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGCTCTTACAGATGACTaGAGACGCACCCAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKALTDD*RRTQCG
Trigger: ACCACACTGGGTGCGTCTCCAGTCATCTGTAAGAGC...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAAGAGAGAAGCAGTTGCTaGGTCTCACTCAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: QSYKQPADSSPYISCKDEERSSC*VSLRFP
Trigger: GGGAAACCTGAGTGAGACCCAGCAACTGCTTCTCTC...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCAAGCTTGCAGAAGTGCTaGCAGGTATCTCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: WIMQALGNCCPWLLGEEPSLQKC*QVSLQQ
Trigger: TTGTTGAAGAGATACCTGCCAGCACTTCTGCAAGCT...TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCATTCCTTCCCTTCACCTaGAATAAAGCAGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: AHLSHQSRRHFLPFKVGPFLPFT*NKAGLP
Trigger: TGGAAGTCCTGCTTTATTCCAGGTGAAGGGAAGGAA...TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTGCATGCCATGCACACACTGTCCTCAGGAGGCTTaGGGAGCAGCTGTCCTACCT +
Preference number: 4 (lower is better)
Translates to: QIFASSPDYLHTCMPCTHCPQEA*GAAVLP
Trigger: AGGTAGGACAGCTGCTCCCCAAGCCTCCTGAGGACA...GTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAAGGAATATTTGGTTCCTaGGTCTCAGAGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QSYKQPADSSPYISCKDEGIFGS*VSELAG
Trigger: CCCAGCCAGCTCTGAGACCCAGGAACCAAATATTCC...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTGGAAACTGCTGCCCATaGCTTTTAGGAGAGGAACCA +
Preference number: 4 (lower is better)
Translates to: NIRTMETSASSLALMCALGNCCP*LLGEEP
Trigger: TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCC...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGATCGTGCAGCAGGTaGATCATGCAGGCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTGSCSR*IMQALG
Trigger: TCCGAGGGCCTGCATGATCCACCTGCTGCACGATCC...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTCCTCTAGAACTGCCCTaGTTTCCTCTTGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: NIRTMETSASSLALMCALPLELP*FPLALF
Trigger: GAAAAGGGCAAGAGGAAACCAGGGCAGTTCTAGAGG...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACAAGTGCTAGCTGCACTTaGGTCAGTCTCAGCACAAGC +
Preference number: 4 (lower is better)
Translates to: RHFLPFKVGPKGKCVWQTSASCT*VSLSTS
Trigger: GCTTGTGCTGAGACTGACCCAAGTGCAGCTAGCACT...TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TACAACACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCACCAACATTCAGAACTaGCTGTGCCCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: YNTDNIRTMETSASSLALTNIQN*LCPNSS
Trigger: GGAAGAGTTGGGGCACAGCCAGTTCTGAATGTTGGT...GAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTGTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTTTAGCCAGCCTGGTTTaGTGTTTCTGGATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: NIRTMETSASSLALMCALLASLV*CFWMLS
Trigger: GCTCAGCATCCAGAAACACCAAACCAGGCTGGCTAA...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGACACATGTTGCTCTTATaGTCAGTGCGCTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERHMLLL*SVRFSP
Trigger: TGGGCTGAAGCGCACTGACCATAAGAGCAACATGTG...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS-3UTR CCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGAATGTCGCATCCTGTaGGAACCCAGCGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGECRIL*EPSVWG
Trigger: ACCCCACACGCTGGGTTCCCACAGGATGCGACATTC...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS-3UTR TCA 90 bp ACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGGTGCACCCCTTCAGTTaGGGGAGAAAGATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TRADAISCPSKWGQRVNVVHPFS*GRKISS
Trigger: AGAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCAC...CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTTTTCTGGTTGGACTGTaGCATCCCAGAAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: HQSRRHFLPFKVGPKGKCFLVGL*HPRKLS
Trigger: TGACAGCTTTCTGGGATGTCACAGTCCAACCAGAAA...ACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTGCATGCCATGCACACACAACGCCCTTCCAAGGTaGACTCCACACTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QIFASSPDYLHTCMPCTHNALPR*TPHCSP
Trigger: AGGACTGCAGTGTGGAGTTCACCTTGGAAGGGCGTT...GTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAAATTGTCTCTGGGTTCTaGGTCAACCCTCCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: QSYKQPADSSPYISCKDEIVSGF*VNPPSR
Trigger: TCTCGAAGGAGGGTTGACTCAGAACCCAGAGACAAT...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAACCCTCTCAGAGGAAGTaGGGGGTTTTGTATTGTCTC +
Preference number: 4 (lower is better)
Translates to: QSYKQPADSSPYISCKDEPSQRK*GVLYCL
Trigger: GAGACAATACAAAACCCCTCACTTCCTCTGAGAGGG...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTCACACGCGGTCGTGTTaGCTAGGTGAACGCCACTTA +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGHTRSC*LGERHL
Trigger: TAAGTGGCGTTCACCTAGTCAACACGACCGCGTGTG...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCTCCTTGGAAGGTGCTaGAGACAAGGATCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: VHNIHLWVCSCVSENRWVLLGRC*RQGSVS
Trigger: GGACACAGATCCTTGTCTTCAGCACCTTCCAAGGAG...CACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGAGGAAGGTGGCCAACTaGGATGATGTTCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: VHNIHLWVCSCVSENRWVRKVAN*DDVPAQ
Trigger: CTGTGCTGGAACATCATCTCAGTTGGCCACCTTCCT...CACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTAGGAAGGTGGCCAACTaGGATGATGTTCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSRKVAN*DDVPAQ
Trigger: CTGTGCTGGAACATCATCTCAGTTGGCCACCTTCCT...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTAGGAAGGTGGCCAACTaGGATGATGTTCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFRKVAN*DDVPAQ
Trigger: CTGTGCTGGAACATCATCTCAGTTGGCCACCTTCCT...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTGTGAAGACGGTTACCTaGAAGGGGCCTACAAGGGAA +
Preference number: 4 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSVKTVT*KGPTRE
Trigger: TTCCCTTGTAGGCCCCTTTCAGGTAACCGTCTTCAC...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp AGAAGTGCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGATCACACCACCTCCTCTaGAGTCAATTCTGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RSAGRYLFNKTWKSFTSGSHHLL*SQFWLP
Trigger: CGGGAGCCAGAATTGACTTCAGAGGAGGTGGTGTGA...TCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGCACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679624.1
CDS-3UTR GCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCGGGTCTCTGGAATATTaGTCTGGGGCTCGATGCCTG +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFGSLEY*SGARCL
Trigger: CAGGCATCGAGCCCCAGAGCAATATTCCAGAGACCC...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGGAGAACCTGCGTCCATaGTGTGGTTCATCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VHNIHLWVCSCVSENRWVENLRP*CGSSGG
Trigger: ACCACCAGATGAACCACAGCATGGACGCAGGTTCTC...CACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAACCGTGTCAGCTCCACTaGTGCATTCCTGTTGACATT +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKPCQLH*CIPVDI
Trigger: AATGTCAACAGGAATGCAGCAGTGGAGCTGACACGG...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTCCCCAGCTCATGCGGATGGTaGACATTCGGGTCAACTGGT +
Preference number: 4 (lower is better)
Translates to: NGLSRVPIFSTSCMAIFPSSCGW*TFGSTG
Trigger: ACCAGTTGACCCGAATGTGCACCATCCGCATGAGCT...GGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCAAAGGCCCATTCAGGTaGAGCTCAATCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFKGPFR*SSIQQG
Trigger: CCCCTGCTGGATTGAGCTGCACCTGAATGGGCCTTT...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTCCCCACCTTGTCAAGCCACTaGAAAGGCCCATTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: NGLSRVPIFSTSCMAIFPTLSSH*KGPFRC
Trigger: GCACCTGAATGGGCCTTTGCAGTGGCTTGACAAGGT...GGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GTCACCGGTGATCCTCTACCGGGAGCTAGATCATCTTATATCCCAGGGGGAAGAATCCACCTCTGGGTTTaGTCGTGTGTTTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: VTGDPLPGARSSYIPGGRIHLWV*SCVSEN
Trigger: GTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT...TCTTCCCCCTGGGATATAAGATGATCTAGCTCCCGGTAGAGGATCACCGGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTGCAGACGCCATTTCTTaGCCTTCAAAGTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFADAIS*PSKWGQ
Trigger: TTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGC...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCATAGACACTATACATTaGATATGCACTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CSLKPPEQTPFLALQSGAIDTIH*ICTGPQ
Trigger: CTGAGGCCCAGTGCATATGCAATGTATAGTGTCTAT...GGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACACGACAAGGGCCTCCTaGTTCATGAGAACACTTACC +
Preference number: 4 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHTTRAS*FMRTLT
Trigger: GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGT...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCATAGCCCTTTTCATTTaGCTATGTTGGCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: CSLKPPEQTPFLALQSGAIALFI*LCWPEM
Trigger: CATCTCAGGCCAACATAGGCAAATGAAAAGGGCTAT...GGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCATGACTGCTCTAGCAAGTTTTCTCCCTAATTaGTGCTGGGAGCAGTACTTG +
Preference number: 4 (lower is better)
Translates to: PRKLLPMAFRRGTMTALASFLPN*CWEQYL
Trigger: CAAGTACTGCTCCCAGCAGCAATTAGGGAGAAAACT...TGCTAGAGCAGTCATGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCACTGTCTACTGTGTTCTaGAAAAGGCTGGGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: WIMQALGNCCPWLLGEEPLSTVF*KRLGKE
Trigger: TTCTTTTCCCAGCCTTTTGCAGAACACAGTAGACAG...TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCGCCCTCGGAAACTGCTaGCCATGGCTTTTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFALGNC*PWLLGE
Trigger: CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGC...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAACCAGAATCAGGCTGTaGCTGAAGCTAGTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKTRIRL*LKLVPK
Trigger: CTTGGGAACTAGCTTCAGGCACAGCCTGATTCTGGT...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGCCCTGGTTTCCTCTTaGCCTTTTCAACTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: HQSRRHFLPFKVGPKGKCALVSS*PFQLSF
Trigger: AAAGGACAGTTGAAAAGGGCAAGAGGAAACCAGGGC...ACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAACGGGTGCACTCTCTTaGTGCTGGTATCCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTTGALS*CWYPPW
Trigger: CCAAGGGGGATACCAGCAGCAAGAGAGTGCACCCGT...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCCCAGGGCTAAACGGGTaGACTCTCTTGCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFPGLNG*TLLLLV
Trigger: TACCAGCAGCAAGAGAGTGCACCCGTTTAGCCCTGG...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GAGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAGAACACTTACCTTGCGTACGTTTTTCTaGTTTCCCTACCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: ETKCHPTTRASCFMRTLTLRTFF*FPYPLE
Trigger: CTCAAGTGGGTAGGGAAAGCAGAAAAACGTACGCAA...GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGTTGCGTACGTTTTTCTaGTTTCCCTACCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLRELRTFF*FPYPLE
Trigger: CTCAAGTGGGTAGGGAAAGCAGAAAAACGTACGCAA...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GTCACCGGTGATCCTCTACCGGGAGCTAGATCATCTTATATCCCAGGGGGAAGACCTCCCCATGGGAGATaGTTCATCATCATTTTGGAT +
Preference number: 4 (lower is better)
Translates to: VTGDPLPGARSSYIPGGRPPHGR*FIIILD
Trigger: ATCCAAAATGATGATGAAGCATCTCCCATGGGGAGG...TCTTCCCCCTGGGATATAAGATGATCTAGCTCCCGGTAGAGGATCACCGGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CTACAAGGGAACATCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTTGAGGATTCAGAACTGGCTGTaGCCCAACTCTTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LQGNIFATQRQYSFAVLRIQNWL*PNSSSH
Trigger: GTGGCTGGAAGAGTTGGGGCACAGCCAGTTCTGAAT...CCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCAGTGCCGCGGCTCTTaGCCACATGTTGCTCTTATG +
Preference number: 4 (lower is better)
Translates to: VFQKTGGCTPSVEGERFLQCRGS*PHVALM
Trigger: CATAAGAGCAACATGTGGGCAAGAGCCGCGGCACTG...AAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS-3UTR CCA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCACTCACACAGCTCCATaGCCCGTAGCTCGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSTHTAP*PVARGG
Trigger: GCCACCACGAGCTACGGGCCATGGAGCTGTGTGAGT...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGATGCTGTGGTTCATCTaGTGGTCACTGGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TRADAISCPSKWGQRVNVMLWFI*WSLVSP
Trigger: TGGAGAAACCAGTGACCACCAGATGAACCACAGCAT...CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTCAAGTTATTATGTGCTaGGGACATCGGATTCGGGGA +
Preference number: 4 (lower is better)
Translates to: NIRTMETSASSLALMCALQVIMC*GHRIRG
Trigger: TCCCCGAATCCGATGTCCCCAGCACATAATAACTTG...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGACAAGTTATTATGTGCTaGGGACATCGGATTCGGGGA +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERQVIMC*GHRIRG
Trigger: TCCCCGAATCCGATGTCCCCAGCACATAATAACTTG...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGCAAGTTATTATGTGCTaGGGACATCGGATTCGGGGA +
Preference number: 4 (lower is better)
Translates to: TRADAISCPSKWGQRVNVQVIMC*GHRIRG
Trigger: TCCCCGAATCCGATGTCCCCAGCACATAATAACTTG...CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTCTCGCAGTAGGTAACTaGCTGCAGGTCCAAGTTATT +
Preference number: 4 (lower is better)
Translates to: HQSRRHFLPFKVGPKGKCLAVGN*LQVQVI
Trigger: AATAACTTGGACCTGCAGCCAGTTACCTACTGCGAG...ACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCTTACAGTTGGGAGACTaGACAAAAATAGCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: CSLKPPEQTPFLALQSGALQLGD*TKIALS
Trigger: TGACAGCGCTATTTTTGTCCAGTCTCCCAACTGTAA...GGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACACAGGTTGCATCCTGGTaGGATCTTGCAGACGGTGGC +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTQVASW*DLADGG
Trigger: GCCACCGTCTGCAAGATCCCACCAGGATGCAACCTG...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCCGAAGCTCATGCGGATaGTGCACATTCGGGTCAACT +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCRSSCG*CTFGST
Trigger: AGTTGACCCGAATGTGCACCATCCGCATGAGCTTCG...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTTCCAGCAGGGGGTACTaGTCACAGTCTGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGSSRGY*SQSVSC
Trigger: ACAGGAGACAGACTGTGACCAGTACCCCCTGCTGGA...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCTCCAGCAGGGGGTACTaGTCACAGTCTGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFSSRGY*SQSVSC
Trigger: ACAGGAGACAGACTGTGACCAGTACCCCCTGCTGGA...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACACTTGGGGAGCCCATCTaGGTGAGGACCTTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTLGEPI*VRTLSS
Trigger: GCTTGACAAGGTCCTCACCCAGATGGGCTCCCCAAG...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTCCCCGTCTCTAAGACACACTaGAACAGCGGATGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: NGLSRVPIFSTSCMAIFPVSKTH*NSGCLG
Trigger: CCCCAAGCATCCGCTGTTCCAGTGTGTCTTAGAGAC...GGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGGTCTCTAAGACACACTaGAACAGCGGATGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VHNIHLWVCSCVSENRWVVSKTH*NSGCLG
Trigger: CCCCAAGCATCCGCTGTTCCAGTGTGTCTTAGAGAC...CACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCGTCTCTAAGACACACTaGAACAGCGGATGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCVSKTH*NSGCLG
Trigger: CCCCAAGCATCCGCTGTTCCAGTGTGTCTTAGAGAC...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTGTCTCTAAGACACACTaGAACAGCGGATGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFVSKTH*NSGCLG
Trigger: CCCCAAGCATCCGCTGTTCCAGTGTGTCTTAGAGAC...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTTCTCCACCTCCTGCATaGCCATTTTCCCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGSPPPA*PFSPSL
Trigger: CAGGCTTGGGGAAAATGGCCATGCAGGAGGTGGAGA...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGCATAACATCCACCTCTaGGTTTGCTCGTGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREHNIHL*VCSCVS
Trigger: TGAAACACACGAGCAAACCCAGAGGTGGATGTTATG...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCGGCATGAGGTCTGCATaGCCCTGCGGGCTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSGMRSA*PCGLFL
Trigger: TAGGAAGAGCCCGCAGGGCCATGCAGACCTCATGCC...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CTACAAGGGAACATCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTTGAGGGAGAGAAGCAGTTGCTaGGTCTCACTCAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LQGNIFATQRQYSFAVLRERSSC*VSLRFP
Trigger: GGGAAACCTGAGTGAGACCCAGCAACTGCTTCTCTC...CCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCATGTTCTGCAAAAGGCTaGGAAAAGAAGAGGACTCTT +
Preference number: 4 (lower is better)
Translates to: WIMQALGNCCPWLLGEEPCSAKG*EKKRTL
Trigger: AAGAGTCCTCTTCTTTTCCCAGCCTTTTGCAGAACA...TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GAGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAGAACACTTACCTTCCTTCCCTTCACCTaGAATAAAGCAGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: ETKCHPTTRASCFMRTLTFLPFT*NKAGLP
Trigger: TGGAAGTCCTGCTTTATTCCAGGTGAAGGGAAGGAA...GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GAGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAGAACACTTACCGTTTTGTATTGTCTCTaGGTTCTGAGTCAACCCTCC +
Preference number: 4 (lower is better)
Translates to: ETKCHPTTRASCFMRTLTVLYCL*VLSQPS
Trigger: GGAGGGTTGACTCAGAACCCAGAGACAATACAAAAC...GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCGGAATATTTGGTTCCTaGGTCTCAGAGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCGIFGS*VSELAG
Trigger: CCCAGCCAGCTCTGAGACCCAGGAACCAAATATTCC...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGGAAACTGCTGCCCATaGCTTTTAGGAGAGGAACCA +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKGNCCP*LLGEEP
Trigger: TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCC...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGTGTAGCACTCTAAGGTaGGAATGGCACCATTTCCTA +
Preference number: 4 (lower is better)
Translates to: SAHLSHQSRRHFLPFKVGCSTLR*EWHHFL
Trigger: TAGGAAATGGTGCCATTCCCACCTTAGAGTGCTACA...CCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTAGTGCTAGCTGCACTTaGGTCAGTCTCAGCACAAGC +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFSASCT*VSLSTS
Trigger: GCTTGTGCTGAGACTGACCCAAGTGCAGCTAGCACT...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGAGTAATCCAAACCGGCTaGGGTAGCTACCTACGTATG +
Preference number: 4 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRVIQTG*GSYLRM
Trigger: CATACGTAGGTAGCTACCCCAGCCGGTTTGGATTAC...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAGAGAGAAGCCTGCCAGGAAGGTaGCCAACTGAGATGATGTTC +
Preference number: 4 (lower is better)
Translates to: AGRYLFNKTWKSFTSGERSLPGR*PTEMMF
Trigger: GAACATCATCTCAGTTGGCCACCTTCCTGGCAGGCT...TCTCTCTCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGTTGGTTCTGGTAAAATaGGGACACGTTTATTTTGGG +
Preference number: 4 (lower is better)
Translates to: SRWIMQALGNCCPWLLGELVLVK*GHVYFG
Trigger: CCCAAAATAAACGTGTCCCCATTTTACCAGAACCAA...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GGGGGCTTCCTGTGTAAGAAACAGGCCATAGATCATTTCACACCAGGCACATACACCAACATTCAGAACTaGCTGTGCCCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: GGFLCKKQAIDHFTPGTYTNIQN*LCPNSS
Trigger: GGAAGAGTTGGGGCACAGCCAGTTCTGAATGTTGGT...GTATGTGCCTGGTGTGAAATGATCTATGGCCTGTTTCTTACACAGGAAGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGATTCAGAGGACCCTTGTaGAAGGGCCCAGATTTGACT +
Preference number: 4 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRFRGPL*KGPDLT
Trigger: AGTCAAATCTGGGCCCTTCCACAAGGGTCCTCTGAA...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCCCCCTAGCAAGGGAGTaGGGCTTGGTTCAGAGGACC +
Preference number: 4 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSPLARE*GLVQRT
Trigger: GGTCCTCTGAACCAAGCCCCACTCCCTTGCTAGGGG...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 72 bp TCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTaGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTT +
Preference number: 4 (lower is better)
Translates to: SAHLSHQSRRHF*PFKVGPKGKCV
Trigger: AACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
3UTR CAA 72 bp CATTTGGCCCTCTCAGAGGAAGTGAGGGGTTTTGTATaGTCTCTGGGTTCTGAGTCAACCCTCCTTCGAGAA +
Preference number: 4 (lower is better)
Translates to: HLALSEEVRGFV*SLGSESTLLRE
Trigger: TTCTCGAAGGAGGGTTGACTCAGAACCCAGAGACAATACAAAACCCCTCACTTCCTCTGAGAGGGCCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCACAGGCGGCAGTAGATaGCATGAGGGAGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTTGGSR*HEGAPS
Trigger: GGAAGGGGCTCCCTCATGTCATCTACTGCCGCCTGT...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACCGTCCTTCTTCATATTaGAGGCGAACTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHRPSSY*RRTHTA
Trigger: AGCTGTGTGAGTTCGCCTTCAATATGAAGAAGGACG...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGTGCACCCCTTCAGTTaGGGGAGAAAGATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKVHPFS*GRKISS
Trigger: AGAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCAC...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTGCATGCCATGCACACACGGGCCTCCTGCTTCATaGGAACACTTACCGTCATTC +
Preference number: 4 (lower is better)
Translates to: QIFASSPDYLHTCMPCTHGPPAS*EHLPSF
Trigger: GAATGACGGTAAGTGTTCTCATGAAGCAGGAGGCCC...GTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAGAGAGAATCCCAGGGGGAAGATaGCAGACCTCTTTGTACCAA +
Preference number: 4 (lower is better)
Translates to: AGRYLFNKTWKSFTSGERIPGGR*QTSLYQ
Trigger: TTGGTACAAAGAGGTCTGTCATCTTCCCCCTGGGAT...TCTCTCTCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTATTGTCTCTGGGTTCTaGGTCAACCCTCCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSIVSGF*VNPPSR
Trigger: TCTCGAAGGAGGGTTGACTCAGAACCCAGAGACAAT...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GGGGGCTTCCTGTGTAAGAAACAGGCCATAGATCATTTCACACCAGGCACATACAGTAGCCTTCAGGTCTaGGCAATGAGGGTTCTAAGA +
Preference number: 4 (lower is better)
Translates to: GGFLCKKQAIDHFTPGTYSSLQV*AMRVLR
Trigger: TCTTAGAACCCTCATTGCTCAGACCTGAAGGCTACT...GTATGTGCCTGGTGTGAAATGATCTATGGCCTGTTTCTTACACAGGAAGCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGAGTCGTGTTGACTAGGTaGACGCCACTTAAAACTGCT +
Preference number: 4 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRVVLTR*TPLKTA
Trigger: AGCAGTTTTAAGTGGCGTTCACCTAGTCAACACGAC...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTCTCCTTGGAAGGTGCTaGAGACAAGGATCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLLLGRC*RQGSVS
Trigger: GGACACAGATCCTTGTCTTCAGCACCTTCCAAGGAG...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCAGGAGTGGTGTAACCTaGGCTCCGGCCCTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTRSGVT*APALWR
Trigger: TCTCCACAGGGCCGGAGCTCAGGTTACACCACTCCT...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACACTTGAGAAGCGGCTaGTGCTCCTTAAACTGTGAT +
Preference number: 4 (lower is better)
Translates to: RHFLPFKVGPKGKCVWQTHLRSG*CSLNCD
Trigger: ATCACAGTTTAAGGAGCATCAGCCGCTTCTCAAGTG...TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCGGTGTTTCTGGATGCTaGGCCAAAAAGCCACTACAC +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCGVSGC*AKKPLH
Trigger: GTGTAGTGGCTTTTTGGCTCAGCATCCAGAAACACC...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTTACCCGCAAAGGATCTaGGAAGGTTGGACAGTGGGT +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGYPQRI*EGWTVG
Trigger: ACCCACTGTCCAACCTTCTCAGATCCTTTGCGGGTA...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537194.6
CDS-3UTR TCA 90 bp TACAACACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCGGGACCCAGCATTTTTaGTCAGTTAACATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: YNTDNIRTMETSASSLALGTQHF*SVNISQ
Trigger: CTGGGAAATGTTAACTGATCAAAAATGCTGGGTCCC...GAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTGTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681239.1
CDS-3UTR GCA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACAGTCCAAGTTATTATGTaGTGGGGACATCGGATTCGG +
Preference number: 4 (lower is better)
Translates to: RHFLPFKVGPKGKCVWQTVQVIM*WGHRIR
Trigger: CCGAATCCGATGTCCCCAGCACATAATAACTTGGAC...TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCACAGTCATGGATGGCTaGGAGGCGTGGAATGTCTCC +
Preference number: 4 (lower is better)
Translates to: FFLDNNGLSRVPIFSTSCTVMDG*EAWNVS
Trigger: GGAGACATTCCACGCCTCGCAGCCATCCATGACTGT...GCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAATGTCAGCTCCACTGCTaGATTCCTGTTGACATTGGA +
Preference number: 4 (lower is better)
Translates to: QSYKQPADSSPYISCKDECQLHC*IPVDIG
Trigger: TCCAATGTCAACAGGAATGCAGCAGTGGAGCTGACA...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGCCGTGTCAGCTCCACTaGTGCATTCCTGTTGACATT +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWPCQLH*CIPVDI
Trigger: AATGTCAACAGGAATGCAGCAGTGGAGCTGACACGG...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTAGCTCATGCGGATGGTaGACATTCGGGTCAACTGGT +
Preference number: 4 (lower is better)
Translates to: VFQKTGGCTPSVEGERFLSSCGW*TFGSTG
Trigger: ACCAGTTGACCCGAATGTGCACCATCCGCATGAGCT...AAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTAGCTCATGCGGATGGTaGACATTCGGGTCAACTGGT +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGSSCGW*TFGSTG
Trigger: ACCAGTTGACCCGAATGTGCACCATCCGCATGAGCT...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCCACTGGAACAGCGGATaGTTGGGGAGCCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTHWNSG*LGSPSG
Trigger: CCCAGATGGGCTCCCCAAGCATCCGCTGTTCCAGTG...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCAGAAAACAGGTGGGTaGACCCCTTCAGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: VFQKTGGCTPSVEGERFLQKTGG*TPSVEG
Trigger: TCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTG...AAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTCAGAAAACAGGTGGGTaGACCCCTTCAGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGQKTGG*TPSVEG
Trigger: TCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTG...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCGCAGACGCCATTTCTTaGCCTTCAAAGTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFADAIS*PSKWGQ
Trigger: TTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGC...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCATGACTGCTCTAGCAATAGACACTATACATTaGATATGCACTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PRKLLPMAFRRGTMTALAIDTIH*ICTGPQ
Trigger: CTGAGGCCCAGTGCATATGCAATGTATAGTGTCTAT...TGCTAGAGCAGTCATGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTACGACAAGGGCCTCCTaGTTCATGAGAACACTTACC +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFTTRAS*FMRTLT
Trigger: GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGT...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACACACCCAGTGTGGTGCTaGCTGAGACCAAATGCCATC +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTHPVWC*LRPNAI
Trigger: GATGGCATTTGGTCTCAGGCAGCACCACACTGGGTG...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGACCAATATAGCCGTATaGATCAGAATCTGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLRETNIAV*IRIWSK
Trigger: CTTGCTCCAGATTCTGATGCATACGGCTATATTGGT...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp ACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTCAGCTTGCAGAAGTaGTGGCAGGTATCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: TRADAISCPSKWGQRVNVFSLQK*WQVSLQ
Trigger: TTGAAGAGATACCTGCCAGCACTTCTGCAAGCTGAA...CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTTTCAGCTTGCAGAAGTaGTGGCAGGTATCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: NIRTMETSASSLALMCALFSLQK*WQVSLQ
Trigger: TTGAAGAGATACCTGCCAGCACTTCTGCAAGCTGAA...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGATAGCCCTTTTCATTTaGCTATGTTGGCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREIALFI*LCWPEM
Trigger: CATCTCAGGCCAACATAGGCAAATGAAAAGGGCTAT...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCCTGTCTACTGTGTTCTaGAAAAGGCTGGGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFLSTVF*KRLGKE
Trigger: TTCTTTTCCCAGCCTTTTGCAGAACACAGTAGACAG...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAGAGAGAACAAGTCTGTCAAGGTaGTCCTTCCGTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: AGRYLFNKTWKSFTSGERTSLSR*SFRLFL
Trigger: CAGGAAGAGACGGAAGGAGCACCTTGACAGACTTGT...TCTCTCTCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGAGAGGAACCATGACTaGTCTAGCAGAAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: FCSLKPPEQTPFLALQSGERNHD*SSRSQN
Trigger: ATTTTGGCTTCTGCTAGAGCAGTCATGGTTCCTCTC...CCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTCATACGTGCATGCCATaGACACACTACTTCAAACCT +
Preference number: 4 (lower is better)
Translates to: NIRTMETSASSLALMCALHTCMP*THYFKP
Trigger: AGGTTTGAAGTAGTGTGTGCATGGCATGCACGTATG...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACAGTCCTACAAGCAGCCTaGAGATTCTTCTCCCTACAT +
Preference number: 4 (lower is better)
Translates to: RHFLPFKVGPKGKCVWQTVLQAA*RFFSLH
Trigger: ATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGAC...TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGTCCTACAAGCAGCCTaGAGATTCTTCTCCCTACAT +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKVLQAA*RFFSLH
Trigger: ATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGAC...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGAGGATCCATGTCCTCTTaGGTACGTTTTTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERGSMSS*VRFSAF
Trigger: GAAAGCAGAAAAACGTACGCAAGAGGACATGGATCC...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCTCTTGCCCACATGTTaGTCTTATGGTCAGTGCGCT +
Preference number: 4 (lower is better)
Translates to: VHNIHLWVCSCVSENRWVLLPTC*SYGQCA
Trigger: AGCGCACTGACCATAAGAGCAACATGTGGGCAAGAG...CACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS-3UTR GCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGACTCAAACGTGGTTaGTCAACACAGGCCCGAGTG +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTGLKRG*STQARV
Trigger: CACTCGGGCCTGTGTTGAGCAACCACGTTTGAGTCC...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS-3UTR CCA 90 bp AGAAGTGCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGACCGCGAGACTCCAAGTaGCAGCAGAAGTTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: RSAGRYLFNKTWKSFTSGPRDSK*QQKFGF
Trigger: AAACCCAAACTTCTGCTGCCACTTGGAGTCTCGCGG...TCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR CCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCACTCACACAGCTCCATaGCCCGTAGCTCGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTTHTAP*PVARGG
Trigger: GCCACCACGAGCTACGGGCCATGGAGCTGTGTGAGT...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAACTCGCAGTAGGTAACTaGCTGCAGGTCCAAGTTATT +
Preference number: 4 (lower is better)
Translates to: QSYKQPADSSPYISCKDELAVGN*LQVQVI
Trigger: AATAACTTGGACCTGCAGCCAGTTACCTACTGCGAG...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCGCTCGTAGTAGGAGATaGAGCACCAGAAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSARSRR*STRRPA
Trigger: AGCCGGCCTTCTGGTGCTCCATCTCCTACTACGAGC...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGAAGTGCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAATCCACAGTCATGGATaGCTGCGAGGCGTGGAATGT +
Preference number: 4 (lower is better)
Translates to: RSAGRYLFNKTWKSFTSGIHSHG*LRGVEC
Trigger: ACATTCCACGCCTCGCAGCCATCCATGACTGTGGAT...TCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTATCCACAGTCATGGATaGCTGCGAGGCGTGGAATGT +
Preference number: 4 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLIHSHG*LRGVEC
Trigger: ACATTCCACGCCTCGCAGCCATCCATGACTGTGGAT...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGTTACAGTTGGGAGACTaGACAAAAATAGCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GLLVCFRKQVGAPLQLRELQLGD*TKIALS
Trigger: TGACAGCGCTATTTTTGTCCAGTCTCCCAACTGTAA...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCTTACAGTTGGGAGACTaGACAAAAATAGCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFLQLGD*TKIALS
Trigger: TGACAGCGCTATTTTTGTCCAGTCTCCCAACTGTAA...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTGCATGCCATGCACACACCGAAGCTCATGCGGATaGTGCACATTCGGGTCAACT +
Preference number: 4 (lower is better)
Translates to: QIFASSPDYLHTCMPCTHRSSCG*CTFGST
Trigger: AGTTGACCCGAATGTGCACCATCCGCATGAGCTTCG...GTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCTCCAGCAGGGGGTACTaGTCACAGTCTGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: FFLDNNGLSRVPIFSTSCSSRGY*SQSVSC
Trigger: ACAGGAGACAGACTGTGACCAGTACCCCCTGCTGGA...GCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CTTGCCAAAAGTATATACACTTCCTTCCCTTCACCTGGAATAAAGCAGGACTTCCTTGGGGAGCCCATCTaGGTGAGGACCTTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: LAKSIYTSFPSPGIKQDFLGEPI*VRTLSS
Trigger: GCTTGACAAGGTCCTCACCCAGATGGGCTCCCCAAG...GAAGTCCTGCTTTATTCCAGGTGAAGGGAAGGAAGTGTATATACTTTTGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCGGAACAGCGGATGCTTaGGGAGCCCATCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTGTADA*GAHLGE
Trigger: CTCACCCAGATGGGCTCCCCAAGCATCCGCTGTTCC...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTGTCTCTAAGACACACTaGAACAGCGGATGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLVSKTH*NSGCLG
Trigger: CCCCAAGCATCCGCTGTTCCAGTGTGTCTTAGAGAC...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGATCTTGCCCTTCAAAGTaGGGCCAAAGGGTAAATGTG +
Preference number: 4 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRSCPSK*GQRVNV
Trigger: CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGA...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGGAGTTTTTAAAGAGGTaGCGCTCATCGATTTTTCCC +
Preference number: 4 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLEFLKR*RSSIFP
Trigger: GGGAAAAATCGATGAGCGCCACCTCTTTAAAAACTC...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGACATTGCATATGCACTaGGCCTCAGCAGATCCTTCC +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWTLHMH*ASADPS
Trigger: GGAAGGATCTGCTGAGGCCCAGTGCATATGCAATGT...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGATTTTCCCCCTTCACCTaGAGTAAGACACGACTTCCA +
Preference number: 4 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRFSPFT*SKTRLP
Trigger: TGGAAGTCGTGTCTTACTCCAGGTGAAGGGGGAAAA...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGAACTCTAAGGTGGGAATaGCACCATTTCCTAACCTCT +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERTLRWE*HHFLTS
Trigger: AGAGGTTAGGAAATGGTGCCATTCCCACCTTAGAGT...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTCCCCGTAATCCAAACCGGCTaGGGTAGCTACCTACGTATG +
Preference number: 4 (lower is better)
Translates to: NGLSRVPIFSTSCMAIFPVIQTG*GSYLRM
Trigger: CATACGTAGGTAGCTACCCCAGCCGGTTTGGATTAC...GGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTGAGAAGGTTGGACAGTaGGTCTCCTCCTTAACACTC +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFEKVGQ*VSSLTL
Trigger: GAGTGTTAAGGAGGAGACCCACTGTCCAACCTTCTC...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537194.6
CDS-3UTR CCA 90 bp TTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCACACAGGCCCGAGTGTaGGTTTCCATGCAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: FFLDNNGLSRVPIFSTSCTQARV*VSMQLS
Trigger: GGACAACTGCATGGAAACCCACACTCGGGCCTGTGT...GCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540846.6
3UTR CAA 72 bp TTTGACTCAGAGCTGTCTGTTTTTACACGCGGCCACTaGTTTAGCCAGCCTGGTTTGGTGTTTCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: FDSELSVFTRGH*FSQPGLVFLDA
Trigger: AGCATCCAGAAACACCAAACCAGGCTGGCTAAACAAGTGGCCGCGTGTAAAAACAGACAGCTCTGAGTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCCGTCCTTCTTCATATTaGAGGCGAACTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCRPSSY*RRTHTA
Trigger: AGCTGTGTGAGTTCGCCTTCAATATGAAGAAGGACG...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp ACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGAAGGACAAACGTAAGTaGGTTTTTAAAGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: TRADAISCPSKWGQRVNVKDKRK*VFKEVA
Trigger: CGCCACCTCTTTAAAAACTCACTTACGTTTGTCCTT...CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TACAACACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCAAGGACAAACGTAAGTaGGTTTTTAAAGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: YNTDNIRTMETSASSLALKDKRK*VFKEVA
Trigger: CGCCACCTCTTTAAAAACTCACTTACGTTTGTCCTT...GAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTGTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCTTGCCTATGTTGGCCTaGGATGTTTCCCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFLPMLA*DVSLLV
Trigger: CACCAGAAGGGAAACATCTCAGGCCAACATAGGCAA...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp AGAAGTGCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAATTGTCTCTGGGTTCTaGGTCAACCCTCCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: RSAGRYLFNKTWKSFTSGIVSGF*VNPPSR
Trigger: TCTCGAAGGAGGGTTGACTCAGAACCCAGAGACAAT...TCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGCACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCCCCTCTCAGAGGAAGTaGGGGGTTTTGTATTGTCTC +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFPSQRK*GVLYCL
Trigger: GAGACAATACAAAACCCCTCACTTCCTCTGAGAGGG...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCATTGCAGAATCACTaGGAATTTCTCAATCCAGTT +
Preference number: 4 (lower is better)
Translates to: SAHLSHQSRRHFLPFKVGPLQNH*EFLNPV
Trigger: AACTGGATTGAGAAATTCTCAGTGATTCTGCAATGG...CCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGTGTTTCTGGATGCTaGGCCAAAAAGCCACTACAC +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGGVSGC*AKKPLH
Trigger: GTGTAGTGGCTTTTTGGCTCAGCATCCAGAAACACC...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGCAAGACATGTTTGTaGAGTTGGGAGGTCACAGGG +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTGKTCL*SWEVTG
Trigger: CCCTGTGACCTCCCAACTTCACAAACATGTCTTGCC...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439724.7
CDS-3UTR GCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCCGATGGGACACCTaGAACCGGCCATCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIFRWDT*NRPSRD
Trigger: GTCCCTGGATGGCCGGTTGCAGGTGTCCCATCGGAA...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCGTCCAAGTTATTATGTaGTGGGGACATCGGATTCGG +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCVQVIM*WGHRIR
Trigger: CCGAATCCGATGTCCCCAGCACATAATAACTTGGAC...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCTGTCAGCTCCACTGCTaGATTCCTGTTGACATTGGA +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCCQLHC*IPVDIG
Trigger: TCCAATGTCAACAGGAATGCAGCAGTGGAGCTGACA...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCCCGTGTCAGCTCCACTaGTGCATTCCTGTTGACATT +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFPCQLH*CIPVDI
Trigger: AATGTCAACAGGAATGCAGCAGTGGAGCTGACACGG...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GGGGGCTTCCTGTGTAAGAAACAGGCCATAGATCATTTCACACCAGGCACATACATCCACCTCTGGGTTTaGTCGTGTGTTTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: GGFLCKKQAIDHFTPGTYIHLWV*SCVSEN
Trigger: GTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT...GTATGTGCCTGGTGTGAAATGATCTATGGCCTGTTTCTTACACAGGAAGCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAATCCACCTCTGGGTTTaGTCGTGTGTTTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKIHLWV*SCVSEN
Trigger: GTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTACGACAAGGGCCTCCTaGTTCATGAGAACACTTACC +
Preference number: 4 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLTTRAS*FMRTLT
Trigger: GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGT...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTACCAATATAGCCGTATaGATCAGAATCTGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: NIRTMETSASSLALMCALTNIAV*IRIWSK
Trigger: CTTGCTCCAGATTCTGATGCATACGGCTATATTGGT...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGTTTCCCAGTCAATGTaGCAGCCCAGGATTTTTAAA +
Preference number: 4 (lower is better)
Translates to: FCSLKPPEQTPFLALQSGVSQSM*QPRIFK
Trigger: TTTAAAAATCCTGGGCTGGCACATTGACTGGGAAAC...CCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTCCCAGTCAATGTaGCAGCCCAGGATTTTTAAA +
Preference number: 4 (lower is better)
Translates to: HQSRRHFLPFKVGPKGKCVSQSM*QPRIFK
Trigger: TTTAAAAATCCTGGGCTGGCACATTGACTGGGAAAC...ACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGAGAGGAACCATGACTaGTCTAGCAGAAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKERNHD*SSRSQN
Trigger: ATTTTGGCTTCTGCTAGAGCAGTCATGGTTCCTCTC...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTAAGACACCATCCAAATaGAGCCAAACGTGTCATTTC +
Preference number: 4 (lower is better)
Translates to: HQSRRHFLPFKVGPKGKCKTPSK*SQTCHF
Trigger: GAAATGACACGTTTGGCTGCATTTGGATGGTGTCTT...ACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGCCCTGGTTTCCTCTTaGCCTTTTCAACTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWALVSS*PFQLSF
Trigger: AAAGGACAGTTGAAAAGGGCAAGAGGAAACCAGGGC...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGAGTCTCAGCACAAGCTaGAAGGTGAAGATGTCATGG +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWSLSTS*KVKMSW
Trigger: CCATGACATCTTCACCTTGCAGCTTGTGCTGAGACT...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGTCCCAGTGCTAGCTaGACTTGGGTCAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSCPSAS*TWVSLS
Trigger: GCTGAGACTGACCCAAGTGCAGCTAGCACTGGGACA...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCGTCAGGTCTACAGCCTaGCAGGAAGGTGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTVRSTA*QEGGQL
Trigger: CAGTTGGCCACCTTCCTGGCAGGCTGTAGACCTGAC...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCCCAGGGCTAAACGGGTaGACTCTCTTGCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSPGLNG*TLLLLV
Trigger: TACCAGCAGCAAGAGAGTGCACCCGTTTAGCCCTGG...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACGGATCCATGTCCTCTTaGGTACGTTTTTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHGSMSS*VRFSAF
Trigger: GAAAGCAGAAAAACGTACGCAAGAGGACATGGATCC...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GGGGGCTTCCTGTGTAAGAAACAGGCCATAGATCATTTCACACCAGGCACATACGGATCCATGTCCTCTTaGGTACGTTTTTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GGFLCKKQAIDHFTPGTYGSMSS*VRFSAF
Trigger: GAAAGCAGAAAAACGTACGCAAGAGGACATGGATCC...GTATGTGCCTGGTGTGAAATGATCTATGGCCTGTTTCTTACACAGGAAGCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATTCAGAACTGGCTGTaGCCCAACTCTTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: FFLDNNGLSRVPIFSTSCIQNWL*PNSSSH
Trigger: GTGGCTGGAAGAGTTGGGGCACAGCCAGTTCTGAAT...GCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TACAACACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCACAATAGGGGTACAATaGTTAAACAGGTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: YNTDNIRTMETSASSLALTIGVQ*LNRCSA
Trigger: AGCAGAGCACCTGTTTAAGCATTGTACCCCTATTGT...GAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTGTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCCACGTTTGCCTAGGGTaGAGGCAAGACATGTTTGTG +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFHVCLG*RQDMFV
Trigger: CACAAACATGTCTTGCCTGCACCCTAGGCAAACGTG...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439724.7
CDS-3UTR CCA 90 bp GAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCGCCCGTAGCTCGTGGTaGCTGTGCAGGTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: EKDFFFLDNNGLSRVPIFARSSW*LCRSGH
Trigger: ATGGCCAGACCTGCACAGCCACCACGAGCTACGGGC...GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTCCCCCAAGTTATTATGTGCTaGGGACATCGGATTCGGGGA +
Preference number: 4 (lower is better)
Translates to: NGLSRVPIFSTSCMAIFPQVIMC*GHRIRG
Trigger: TCCCCGAATCCGATGTCCCCAGCACATAATAACTTG...GGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTCCCCCTCGCAGTAGGTAACTaGCTGCAGGTCCAAGTTATT +
Preference number: 4 (lower is better)
Translates to: NGLSRVPIFSTSCMAIFPLAVGN*LQVQVI
Trigger: AATAACTTGGACCTGCAGCCAGTTACCTACTGCGAG...GGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCGCTCGTAGTAGGAGATaGAGCACCAGAAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTARSRR*STRRPA
Trigger: AGCCGGCCTTCTGGTGCTCCATCTCCTACTACGAGC...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCAGCCATCCACAGTCATaGATGGCTGCGAGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTSHPQS*MAARRG
Trigger: TCCACGCCTCGCAGCCATCCATGACTGTGGATGGCT...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TACAACACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCTTACAGTTGGGAGACTaGACAAAAATAGCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: YNTDNIRTMETSASSLALLQLGD*TKIALS
Trigger: TGACAGCGCTATTTTTGTCCAGTCTCCCAACTGTAA...GAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTGTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGTCTCTAAGACACACTaGAACAGCGGATGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTVSKTH*NSGCLG
Trigger: CCCCAAGCATCCGCTGTTCCAGTGTGTCTTAGAGAC...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAACATAACATCCACCTCTaGGTTTGCTCGTGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: QSYKQPADSSPYISCKDEHNIHL*VCSCVS
Trigger: TGAAACACACGAGCAAACCCAGAGGTGGATGTTATG...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACATAACATCCACCTCTaGGTTTGCTCGTGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRHNIHL*VCSCVS
Trigger: TGAAACACACGAGCAAACCCAGAGGTGGATGTTATG...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTTCTTGCCCTTCAAAGTaGGGCCAAAGGGTAAATGTG +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFSCPSK*GQRVNV
Trigger: CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGA...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCTCTTGCCCTTCAAAGTaGGGCCAAAGGGTAAATGTG +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCSCPSK*GQRVNV
Trigger: CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGA...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTGTATGCATCAGAATCTaGAGCAAGCTCTTACAGATG +
Preference number: 4 (lower is better)
Translates to: NIRTMETSASSLALMCALVCIRI*SKLLQM
Trigger: CATCTGTAAGAGCTTGCTCCAGATTCTGATGCATAC...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGACTCTTCAACAAAACCTaGAAAAGCTTCACCTCAGGA +
Preference number: 4 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERLFNKT*KSFTSG
Trigger: TCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAG...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACGTTTTGTATTGTCTCTaGGTTCTGAGTCAACCCTCC +
Preference number: 4 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHVLYCL*VLSQPS
Trigger: GGAGGGTTGACTCAGAACCCAGAGACAATACAAAAC...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCTTTTCCCCCTTCACCTaGAGTAAGACACGACTTCCA +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCFSPFT*SKTRLP
Trigger: TGGAAGTCGTGTCTTACTCCAGGTGAAGGGGGAAAA...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTTTTTCCCCCTTCACCTaGAGTAAGACACGACTTCCA +
Preference number: 4 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSFSPFT*SKTRLP
Trigger: TGGAAGTCGTGTCTTACTCCAGGTGAAGGGGGAAAA...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTCCTCTAGAACTGCCCTaGTTTCCTCTTGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGPLELP*FPLALF
Trigger: GAAAAGGGCAAGAGGAAACCAGGGCAGTTCTAGAGG...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCAGTGCTAGCTGCACTTaGGTCAGTCTCAGCACAAGC +
Preference number: 4 (lower is better)
Translates to: FFLDNNGLSRVPIFSTSCSASCT*VSLSTS
Trigger: GCTTGTGCTGAGACTGACCCAAGTGCAGCTAGCACT...GCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCTTCAGAGGACCCTTGTaGAAGGGCCCAGATTTGACT +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFFRGPL*KGPDLT
Trigger: AGTCAAATCTGGGCCCTTCCACAAGGGTCCTCTGAA...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCCCAGGGACTCAAACGTaGTTGCTCAACACAGGCCCG +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTPGTQT*LLNTGP
Trigger: CGGGCCTGTGTTGAGCAACCACGTTTGAGTCCCTGG...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS-3UTR TCA 90 bp CAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTGCATGCCATGCACACACCGTCCTTCTTCATATTaGAGGCGAACTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: QIFASSPDYLHTCMPCTHRPSSY*RRTHTA
Trigger: AGCTGTGTGAGTTCGCCTTCAATATGAAGAAGGACG...GTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGTGCACCCCTTCAGTTaGGGGAGAAAGATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGVHPFS*GRKISS
Trigger: AGAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCAC...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCGTGCACCCCTTCAGTTaGGGGAGAAAGATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFVHPFS*GRKISS
Trigger: AGAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCAC...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CTCCTGCTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTAATGTGAACGCCCTTCCAAGGTaGACTCCACACTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LLLHENTYRHSNLFEINVNALPR*TPHCSP
Trigger: AGGACTGCAGTGTGGAGTTCACCTTGGAAGGGCGTT...CACATTAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCGTGTGCAGGTTCTGCTaGACACGCACCTCCCAATCA +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTVCRFC*TRTSQS
Trigger: TGATTGGGAGGTGCGTGTTCAGCAGAACCTGCACAC...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CTCCTGCTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTAATGTGGCAAGCTCTTACAGATaGCTGGAGACGCACCCAGTG +
Preference number: 4 (lower is better)
Translates to: LLLHENTYRHSNLFEINVASSYR*LETHPV
Trigger: CACTGGGTGCGTCTCCAGTCATCTGTAAGAGCTTGC...CACATTAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCAGTAGCCTTCAGGTCTaGGCAATGAGGGTTCTAAGA +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFSSLQV*AMRVLR
Trigger: TCTTAGAACCCTCATTGCTCAGACCTGAAGGCTACT...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCGGGTCTCTGGAATATTaGTCTGGGGCTCGATGCCTG +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTGSLEY*SGARCL
Trigger: CAGGCATCGAGCCCCAGAGCAATATTCCAGAGACCC...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCGAGAACCTGCGTCCATaGTGTGGTTCATCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSENLRP*CGSSGG
Trigger: ACCACCAGATGAACCACAGCATGGACGCAGGTTCTC...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCGTCCAAGTTATTATGTaGTGGGGACATCGGATTCGG +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFVQVIM*WGHRIR
Trigger: CCGAATCCGATGTCCCCAGCACATAATAACTTGGAC...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTTGTCAGCTCCACTGCTaGATTCCTGTTGACATTGGA +
Preference number: 4 (lower is better)
Translates to: VFQKTGGCTPSVEGERFLCQLHC*IPVDIG
Trigger: TCCAATGTCAACAGGAATGCAGCAGTGGAGCTGACA...AAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTGTCACTGAGGCACTCTaGGAAGACCTCCCCTCCGAT +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIVTEAL*EDLPSD
Trigger: ATCGGAGGGGAGGTCTTCGCAGAGTGCCTCAGTGAC...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCAAAGGCCCATTCAGGTaGAGCTCAATCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTKGPFR*SSIQQG
Trigger: CCCCTGCTGGATTGAGCTGCACCTGAATGGGCCTTT...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCACCTTGTCAAGCCACTaGAAAGGCCCATTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSTLSSH*KGPFRC
Trigger: GCACCTGAATGGGCCTTTGCAGTGGCTTGACAAGGT...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCCACTGGAACAGCGGATaGTTGGGGAGCCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: EKDFFFLDNNGLSRVPIFHWNSG*LGSPSG
Trigger: CCCAGATGGGCTCCCCAAGCATCCGCTGTTCCAGTG...GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTCCCCATCCACCTCTGGGTTTaGTCGTGTGTTTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: NGLSRVPIFSTSCMAIFPIHLWV*SCVSEN
Trigger: GTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT...GGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GGGGGCTTCCTGTGTAAGAAACAGGCCATAGATCATTTCACACCAGGCACATACGTTTCCCAGTCAATGTaGCAGCCCAGGATTTTTAAA +
Preference number: 4 (lower is better)
Translates to: GGFLCKKQAIDHFTPGTYVSQSM*QPRIFK
Trigger: TTTAAAAATCCTGGGCTGGCACATTGACTGGGAAAC...GTATGTGCCTGGTGTGAAATGATCTATGGCCTGTTTCTTACACAGGAAGCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CTACAAGGGAACATCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTTGAGGGAGAGGAACCATGACTaGTCTAGCAGAAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LQGNIFATQRQYSFAVLRERNHD*SSRSQN
Trigger: ATTTTGGCTTCTGCTAGAGCAGTCATGGTTCCTCTC...CCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CTCCTGCTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTAATGTGCAGGCCCTCGGAAACTaGTGCCCATGGCTTTTAGGA +
Preference number: 4 (lower is better)
Translates to: LLLHENTYRHSNLFEINVQALGN*CPWLLG
Trigger: TCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTG...CACATTAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCCACAGGTGGGTTTaGCTACAATCCCACACATCC +
Preference number: 4 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSCHRWV*LQSHTS
Trigger: GGATGTGTGGGATTGTAGGCAAACCCACCTGTGGCA...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGAAGCTACCTACGTATGTaGTGGAAGCATCTAAGTTAC +
Preference number: 4 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRSYLRM*WKHLSY
Trigger: GTAACTTAGATGCTTCCAGCACATACGTAGGTAGCT...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCATACGTGCATGCCATaGACACACTACTTCAAACCT +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFHTCMP*THYFKP
Trigger: AGGTTTGAAGTAGTGTGTGCATGGCATGCACGTATG...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCAAATGAAACAGATCTTTaGTTCTTCCCCAGATTACTT +
Preference number: 4 (lower is better)
Translates to: WIMQALGNCCPWLLGEEPNETDL*FFPRLL
Trigger: AAGTAATCTGGGGAAGAAGCAAAGATCTGTTTCATT...TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCCCAGGGCTAAACGGGTaGACTCTCTTGCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTPGLNG*TLLLLV
Trigger: TACCAGCAGCAAGAGAGTGCACCCGTTTAGCCCTGG...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCCAGGTAGCCAGGGGGTaGGGTCTCTGGAATATTGCT +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTQVARG*GLWNIA
Trigger: AGCAATATTCCAGAGACCCCACCCCCTGGCTACCTG...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTATGCTGTGGTTCATCTaGTGGTCACTGGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLMLWFI*WSLVSP
Trigger: TGGAGAAACCAGTGACCACCAGATGAACCACAGCAT...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTCAAGTTATTATGTGCTaGGGACATCGGATTCGGGGA +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGQVIMC*GHRIRG
Trigger: TCCCCGAATCCGATGTCCCCAGCACATAATAACTTG...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCAGCAGGGGGTACTaGTCACAGTCTGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTSSRGY*SQSVSC
Trigger: ACAGGAGACAGACTGTGACCAGTACCCCCTGCTGGA...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTGGGGGAGGGGGCCGGTaGTGTAATACTACCTGTTCT +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIGGGGR*CNTTCS
Trigger: AGAACAGGTAGTATTACACCACCGGCCCCCTCCCCC...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAACAGAGGGGTGTTTCTaGTTGGACTGTGACATCCCA +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTTEGCF*LDCDIP
Trigger: TGGGATGTCACAGTCCAACCAGAAACACCCCTCTGT...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGAGTTTTTAAAGAGGTaGCGCTCATCGATTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKEFLKR*RSSIFP
Trigger: GGGAAAAATCGATGAGCGCCACCTCTTTAAAAACTC...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACTCTTCAACAAAACCTaGAAAAGCTTCACCTCAGGA +
Preference number: 4 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRLFNKT*KSFTSG
Trigger: TCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAG...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTGTCCTCAGGAGGCTTaGGGAGCAGCTGTCCTACCT +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPICPQEA*GAAVLP
Trigger: AGGTAGGACAGCTGCTCCCCAAGCCTCCTGAGGACA...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACTTCCATAGATCACTaGATCACCAGAATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCTSIDH*ITRIRL
Trigger: CAGCCTGATTCTGGTGATCCAGTGATCTATGGAAGT...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTACTTCCATAGATCACTaGATCACCAGAATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFTSIDH*ITRIRL
Trigger: CAGCCTGATTCTGGTGATCCAGTGATCTATGGAAGT...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACATTAGCCAGCCTGGTTTaGTGTTTCTGGATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTLASLV*CFWMLS
Trigger: GCTCAGCATCCAGAAACACCAAACCAGGCTGGCTAA...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGGCTTCTTGGATAGATaGCTCCATCTCTCTGTAATG +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWGFLDR*LHLSVM
Trigger: CATTACAGAGAGATGGAGCCATCTATCCAAGAAGCC...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTCCCCGGCTTCTTGGATAGATaGCTCCATCTCTCTGTAATG +
Preference number: 4 (lower is better)
Translates to: NGLSRVPIFSTSCMAIFPGFLDR*LHLSVM
Trigger: CATTACAGAGAGATGGAGCCATCTATCCAAGAAGCC...GGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTAAGGACAAACGTAAGTaGGTTTTTAAAGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFKDKRK*VFKEVA
Trigger: CGCCACCTCTTTAAAAACTCACTTACGTTTGTCCTT...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTCACACGCGGTCGTGTTaGCTAGGTGAACGCCACTTA +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIHTRSC*LGERHL
Trigger: TAAGTGGCGTTCACCTAGTCAACACGACCGCGTGTG...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCACAGCTTCGCTGTGTTaGGGTTTGGTTCTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFTASLC*GLVLVK
Trigger: TTTTACCAGAACCAAACCTCAACACAGCGAAGCTGT...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCGAGAACCTGCGTCCATaGTGTGGTTCATCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTENLRP*CGSSGG
Trigger: ACCACCAGATGAACCACAGCATGGACGCAGGTTCTC...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGTCCAAGTTATTATGTaGTGGGGACATCGGATTCGG +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTVQVIM*WGHRIR
Trigger: CCGAATCCGATGTCCCCAGCACATAATAACTTGGAC...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CTTGCCAAAAGTATATACACTTCCTTCCCTTCACCTGGAATAAAGCAGGACTTCCCGTGTCAGCTCCACTaGTGCATTCCTGTTGACATT +
Preference number: 4 (lower is better)
Translates to: LAKSIYTSFPSPGIKQDFPCQLH*CIPVDI
Trigger: AATGTCAACAGGAATGCAGCAGTGGAGCTGACACGG...GAAGTCCTGCTTTATTCCAGGTGAAGGGAAGGAAGTGTATATACTTTTGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTAAAGGCCCATTCAGGTaGAGCTCAATCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIKGPFR*SSIQQG
Trigger: CCCCTGCTGGATTGAGCTGCACCTGAATGGGCCTTT...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCAATATAGCCGTATaGATCAGAATCTGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCTNIAV*IRIWSK
Trigger: CTTGCTCCAGATTCTGATGCATACGGCTATATTGGT...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTTTCAGCTTGCAGAAGTaGTGGCAGGTATCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGFSLQK*WQVSLQ
Trigger: TTGAAGAGATACCTGCCAGCACTTCTGCAAGCTGAA...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTGGCCGAATAGTGAAGGTAATGCAGCAGGTGGATCATaGAGGCCCTCGGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: HAFYKVIKRSGWPNSEGNAAGGS*RPSETA
Trigger: AGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGC...ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTGCCCTCATAGGATCGTaGAGCAGGTGGATCATGCAG +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIALIGS*SRWIMQ
Trigger: CTGCATGATCCACCTGCTGCACGATCCTATGAGGGC...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CTACAAGGGAACATCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTTGAGGAGCTACCTACGTATGTaGTGGAAGCATCTAAGTTAC +
Preference number: 4 (lower is better)
Translates to: LQGNIFATQRQYSFAVLRSYLRM*WKHLSY
Trigger: GTAACTTAGATGCTTCCAGCACATACGTAGGTAGCT...CCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTCCCCGATTACTTACATACGTaGATGCCATGCACACACTAC +
Preference number: 4 (lower is better)
Translates to: NGLSRVPIFSTSCMAIFPDYLHT*MPCTHY
Trigger: GTAGTGTGTGCATGGCATGCACGTATGTAAGTAATC...GGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTGGCCGAATAGTGAAGGTAATACGGGTGCACTCTCTTaGTGCTGGTATCCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: HAFYKVIKRSGWPNSEGNTGALS*CWYPPW
Trigger: CCAAGGGGGATACCAGCAGCAAGAGAGTGCACCCGT...ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACGTCCAAATTAGAATaGTCTAAGAGGAACGCAGCA +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCTSKLE*SKRNAA
Trigger: TGCTGCGTTCCTCTTAGAGCATTCTAATTTGGACGT...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537194.6
CDS-3UTR GCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCGAGTGTGGGTTTCCATaGAGTTGTCCCATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTECGFP*SCPILW
Trigger: CCACAGGATGGGACAACTGCATGGAAACCCACACTC...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS-3UTR GCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCCTTCAGGTTGCATCCTaGAAGGGGAGATGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTLQVAS*KGRWKA
Trigger: AGCCTTCCATCTCCCCTTGCAGGATGCAACCTGAAG...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560424.1
CDS-3UTR CCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCATCCACAGTCATGGATaGCTGCGAGGCGTGGAATGT +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTIHSHG*LRGVEC
Trigger: ACATTCCACGCCTCGCAGCCATCCATGACTGTGGAT...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCAGCCATCCACAGTCATaGATGGCTGCGAGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: EKDFFFLDNNGLSRVPIFSHPQS*MAARRG
Trigger: TCCACGCCTCGCAGCCATCCATGACTGTGGATGGCT...GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CTCCTGCTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTAATGTGCGAAGCTCATGCGGATaGTGCACATTCGGGTCAACT +
Preference number: 4 (lower is better)
Translates to: LLLHENTYRHSNLFEINVRSSCG*CTFGST
Trigger: AGTTGACCCGAATGTGCACCATCCGCATGAGCTTCG...CACATTAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTCTCCACCTCCTGCATaGCCATTTTCCCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPISPPPA*PFSPSL
Trigger: CAGGCTTGGGGAAAATGGCCATGCAGGAGGTGGAGA...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCCATAACATCCACCTCTaGGTTTGCTCGTGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFHNIHL*VCSCVS
Trigger: TGAAACACACGAGCAAACCCAGAGGTGGATGTTATG...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCGAGTTTTTAAAGAGGTaGCGCTCATCGATTTTTCCC +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCEFLKR*RSSIFP
Trigger: GGGAAAAATCGATGAGCGCCACCTCTTTAAAAACTC...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCGCTCTTACAGATGACTaGAGACGCACCCAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTALTDD*RRTQCG
Trigger: ACCACACTGGGTGCGTCTCCAGTCATCTGTAAGAGC...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CTACAAGGGAACATCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTTGAGGGTATGCATCAGAATCTaGAGCAAGCTCTTACAGATG +
Preference number: 4 (lower is better)
Translates to: LQGNIFATQRQYSFAVLRVCIRI*SKLLQM
Trigger: CATCTGTAAGAGCTTGCTCCAGATTCTGATGCATAC...CCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAGAGAGAGTATGCATCAGAATCTaGAGCAAGCTCTTACAGATG +
Preference number: 4 (lower is better)
Translates to: AGRYLFNKTWKSFTSGERVCIRI*SKLLQM
Trigger: CATCTGTAAGAGCTTGCTCCAGATTCTGATGCATAC...TCTCTCTCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGTTCATTTGCCTATGTTaGCCTGAGATGTTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWFICLC*PEMFPF
Trigger: GAAGGGAAACATCTCAGGCCAACATAGGCAAATGAA...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGTGTTCTGCAAAAGGCTaGGAAAAGAAGAGGACTCTT +
Preference number: 4 (lower is better)
Translates to: VHNIHLWVCSCVSENRWVCSAKG*EKKRTL
Trigger: AAGAGTCCTCTTCTTTTCCCAGCCTTTTGCAGAACA...CACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCGGTCTCAGAGCTGGCTaGGAACATGAACACATGTAC +
Preference number: 4 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSGLRAG*EHEHMY
Trigger: GTACATGTGTTCATGTTCCCAGCCAGCTCTGAGACC...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCGGAAACTGCTGCCCATaGCTTTTAGGAGAGGAACCA +
Preference number: 4 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSGNCCP*LLGEEP
Trigger: TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCC...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTTGTAGCACTCTAAGGTaGGAATGGCACCATTTCCTA +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGCSTLR*EWHHFL
Trigger: TAGGAAATGGTGCCATTCCCACCTTAGAGTGCTACA...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGTCTAAGTTACTAAATTaGGAAGAAGCGAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWSKLLN*EEARWG
Trigger: TCCCCACCTCGCTTCTTCCCAATTTAGTAACTTAGA...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCGTAATCCAAACCGGCTaGGGTAGCTACCTACGTATG +
Preference number: 4 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSVIQTG*GSYLRM
Trigger: CATACGTAGGTAGCTACCCCAGCCGGTTTGGATTAC...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTGCATGCCATGCACACACGGCTTCTTGGATAGATaGCTCCATCTCTCTGTAATG +
Preference number: 4 (lower is better)
Translates to: QIFASSPDYLHTCMPCTHGFLDR*LHLSVM
Trigger: CATTACAGAGAGATGGAGCCATCTATCCAAGAAGCC...GTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 72 bp GGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTaGCGTACGTTTTTCTGCTTTCCCTACCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: GDASSSFWIHVL*RTFFCFPYPLE
Trigger: CTCAAGTGGGTAGGGAAAGCAGAAAAACGTACGCAAGAGGACATGGATCCAAAATGATGATGAAGCATCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCGTGCACCCCTTCAGTTaGGGGAGAAAGATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSVHPFS*GRKISS
Trigger: AGAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCAC...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCAGCTGGCTGGGAACATaGACACATGTACAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTSWLGT*THVQEV
Trigger: AACCTCCTGTACATGTGTTCATGTTCCCAGCCAGCT...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTCAAATTTATTTTCAGTaGTGCCACAGGTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGQIYFQ*CHRWVC
Trigger: GCAAACCCACCTGTGGCATCACTGAAAATAAATTTG...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp TTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCACAGCTTCGCTGTGTTaGGGTTTGGTTCTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: FFLDNNGLSRVPIFSTSCTASLC*GLVLVK
Trigger: TTTTACCAGAACCAAACCTCAACACAGCGAAGCTGT...GCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp CATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTGGCCGAATAGTGAAGGTAATCTTTCCCTACCCACTTaGGAAGCGGCTGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: HAFYKVIKRSGWPNSEGNLSLPT*EAADAP
Trigger: AGGAGCATCAGCCGCTTCTCAAGTGGGTAGGGAAAG...ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp AATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTCCCCCCATTGCAGAATCACTaGGAATTTCTCAATCCAGTT +
Preference number: 4 (lower is better)
Translates to: NGLSRVPIFSTSCMAIFPPLQNH*EFLNPV
Trigger: AACTGGATTGAGAAATTCTCAGTGATTCTGCAATGG...GGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCCCGTGTCAGCTCCACTaGTGCATTCCTGTTGACATT +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTPCQLH*CIPVDI
Trigger: AATGTCAACAGGAATGCAGCAGTGGAGCTGACACGG...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATCCACCTCTGGGTTTaGTCGTGTGTTTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: FFLDNNGLSRVPIFSTSCIHLWV*SCVSEN
Trigger: GTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT...GCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTAAGACACCATCCAAATaGAGCCAAACGTGTCATTTC +
Preference number: 4 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLKTPSK*SQTCHF
Trigger: GAAATGACACGTTTGGCTGCATTTGGATGGTGTCTT...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTGCCACAGGTGGGTTTaGCTACAATCCCACACATCC +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPICHRWV*LQSHTS
Trigger: GGATGTGTGGGATTGTAGGCAAACCCACCTGTGGCA...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCGATTACTTACATACGTaGATGCCATGCACACACTAC +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFDYLHT*MPCTHY
Trigger: GTAGTGTGTGCATGGCATGCACGTATGTAAGTAATC...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTACAATAGGGGTACAATaGTTAAACAGGTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QLFITSTSGFARVFQKTGTIGVQ*LNRCSA
Trigger: AGCAGAGCACCTGTTTAAGCATTGTACCCCTATTGT...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTACAATAGGGGTACAATaGTTAAACAGGTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLTIGVQ*LNRCSA
Trigger: AGCAGAGCACCTGTTTAAGCATTGTACCCCTATTGT...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CTTGCCAAAAGTATATACACTTCCTTCCCTTCACCTGGAATAAAGCAGGACTTCCTCGCAGTAGGTAACTaGCTGCAGGTCCAAGTTATT +
Preference number: 4 (lower is better)
Translates to: LAKSIYTSFPSPGIKQDFLAVGN*LQVQVI
Trigger: AATAACTTGGACCTGCAGCCAGTTACCTACTGCGAG...GAAGTCCTGCTTTATTCCAGGTGAAGGGAAGGAAGTGTATATACTTTTGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTATCCACAGTCATGGATaGCTGCGAGGCGTGGAATGT +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIIHSHG*LRGVEC
Trigger: ACATTCCACGCCTCGCAGCCATCCATGACTGTGGAT...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCTTACAGTTGGGAGACTaGACAAAAATAGCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFLQLGD*TKIALS
Trigger: TGACAGCGCTATTTTTGTCCAGTCTCCCAACTGTAA...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTGGCCGAATAGTGAAGGTAATTCTCCACCTCCTGCATaGCCATTTTCCCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: HAFYKVIKRSGWPNSEGNSPPPA*PFSPSL
Trigger: CAGGCTTGGGGAAAATGGCCATGCAGGAGGTGGAGA...ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CTCCTGCTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTAATGTGGCTGGGAATGTTCACTaGAAGAGGCACTGTCACAAG +
Preference number: 4 (lower is better)
Translates to: LLLHENTYRHSNLFEINVAGNVH*KRHCHK
Trigger: CTTGTGACAGTGCCTCTTCCAGTGAACATTCCCAGC...CACATTAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CTCCTGCTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTAATGTGACATTGCATATGCACTaGGCCTCAGCAGATCCTTCC +
Preference number: 4 (lower is better)
Translates to: LLLHENTYRHSNLFEINVTLHMH*ASADPS
Trigger: GGAAGGATCTGCTGAGGCCCAGTGCATATGCAATGT...CACATTAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCTCTTCAACAAAACCTaGAAAAGCTTCACCTCAGGA +
Preference number: 4 (lower is better)
Translates to: VFQKTGGCTPSVEGERFLLFNKT*KSFTSG
Trigger: TCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAG...AAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTTTCATTTGCCTATGTTaGCCTGAGATGTTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLFICLC*PEMFPF
Trigger: GAAGGGAAACATCTCAGGCCAACATAGGCAAATGAA...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAGAGAGAATTAAAAGGTCAGGCTaGCCGAATAGTGAAGGTAAT +
Preference number: 4 (lower is better)
Translates to: AGRYLFNKTWKSFTSGERIKRSG*PNSEGN
Trigger: ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAAT...TCTCTCTCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 72 bp ATCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTaGAGGTTTGGTTCTGGTAAAATGGGGACACGTTTA +
Preference number: 4 (lower is better)
Translates to: IFATQRQYSFAV*RFGSGKMGTRL
Trigger: TAAACGTGTCCCCATTTTACCAGAACCAAACCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCCGTCCTTCTTCATATTaGAGGCGAACTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTRPSSY*RRTHTA
Trigger: AGCTGTGTGAGTTCGCCTTCAATATGAAGAAGGACG...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTTTCTGGTTGGACTGTaGCATCCCAGAAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTFLVGL*HPRKLS
Trigger: TGACAGCTTTCTGGGATGTCACAGTCCAACCAGAAA...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCCCAATCAGTATGTTCTaGGAGGGGAGGGAGACAGAC +
Preference number: 4 (lower is better)
Translates to: EKDFFFLDNNGLSRVPIFPISMF*EGRETD
Trigger: GTCTGTCTCCCTCCCCTCTCAGAACATACTGATTGG...GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTGGTGTTTCTGGATGCTaGGCCAAAAAGCCACTACAC +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIGVSGC*AKKPLH
Trigger: GTGTAGTGGCTTTTTGGCTCAGCATCCAGAAACACC...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTGGAAGGGCCCAGATTTaGCTCAGAGCTGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIGRAQI*LRAVCF
Trigger: AAAACAGACAGCTCTGAGTCAAATCTGGGCCCTTCC...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCGAGAACCTGCGTCCATaGTGTGGTTCATCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: EKDFFFLDNNGLSRVPIFENLRP*CGSSGG
Trigger: ACCACCAGATGAACCACAGCATGGACGCAGGTTCTC...GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CTCCTGCTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTAATGTGGTCCAAGTTATTATGTaGTGGGGACATCGGATTCGG +
Preference number: 4 (lower is better)
Translates to: LLLHENTYRHSNLFEINVVQVIM*WGHRIR
Trigger: CCGAATCCGATGTCCCCAGCACATAATAACTTGGAC...CACATTAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCACCTTGTCAAGCCACTaGAAAGGCCCATTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: EKDFFFLDNNGLSRVPIFTLSSH*KGPFRC
Trigger: GCACCTGAATGGGCCTTTGCAGTGGCTTGACAAGGT...GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCAGCTACCTACGTATGTaGTGGAAGCATCTAAGTTAC +
Preference number: 4 (lower is better)
Translates to: FFLDNNGLSRVPIFSTSCSYLRM*WKHLSY
Trigger: GTAACTTAGATGCTTCCAGCACATACGTAGGTAGCT...GCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGATTACTTACATACGTaGATGCCATGCACACACTAC +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTDYLHT*MPCTHY
Trigger: GTAGTGTGTGCATGGCATGCACGTATGTAAGTAATC...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CTTGCCAAAAGTATATACACTTCCTTCCCTTCACCTGGAATAAAGCAGGACTTCCCTCCCCATGGGAGATaGTTCATCATCATTTTGGAT +
Preference number: 4 (lower is better)
Translates to: LAKSIYTSFPSPGIKQDFPPHGR*FIIILD
Trigger: ATCCAAAATGATGATGAAGCATCTCCCATGGGGAGG...GAAGTCCTGCTTTATTCCAGGTGAAGGGAAGGAAGTGTATATACTTTTGGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACATGTTCTGCAAAAGGCTaGGAAAAGAAGAGGACTCTT +
Preference number: 4 (lower is better)
Translates to: TQLFITSTSGFARVFQKTCSAKG*EKKRTL
Trigger: AAGAGTCCTCTTCTTTTCCCAGCCTTTTGCAGAACA...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGAAGTGCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGATTGGTTCTGGTAAAATaGGGACACGTTTATTTTGGG +
Preference number: 4 (lower is better)
Translates to: RSAGRYLFNKTWKSFTSGLVLVK*GHVYFG
Trigger: CCCAAAATAAACGTGTCCCCATTTTACCAGAACCAA...TCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGCACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 72 bp ACTAGTTTTCTCCCTAATTGCTGCTGGGAGCAGTACTaGTTACACAATACAACTGCTATAGTTGTCACCGGT +
Preference number: 4 (lower is better)
Translates to: TSFLPNCCWEQY*LHNTTAIVVTG
Trigger: ACCGGTGACAACTATAGCAGTTGTATTGTGTAACAAGTACTGCTCCCAGCAGCAATTAGGGAGAAAACTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCAAGACACCATCCAAATaGAGCCAAACGTGTCATTTC +
Preference number: 4 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSKTPSK*SQTCHF
Trigger: GAAATGACACGTTTGGCTGCATTTGGATGGTGTCTT...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCAATGAAACAGATCTTTaGTTCTTCCCCAGATTACTT +
Preference number: 4 (lower is better)
Translates to: FITSTSGFARVFQKTGGCNETDL*FFPRLL
Trigger: AAGTAATCTGGGGAAGAAGCAAAGATCTGTTTCATT...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTAATGAAACAGATCTTTaGTTCTTCCCCAGATTACTT +
Preference number: 4 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFNETDL*FFPRLL
Trigger: AAGTAATCTGGGGAAGAAGCAAAGATCTGTTTCATT...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCCATAACATCCACCTCTaGGTTTGCTCGTGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTHNIHL*VCSCVS
Trigger: TGAAACACACGAGCAAACCCAGAGGTGGATGTTATG...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTAGGGGTGTTTCTGGTTaGACTGTGACATCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIRGVSG*TVTSQK
Trigger: TTTCTGGGATGTCACAGTCCAACCAGAAACACCCCT...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CTCCTGCTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTAATGTGAGCTTGCAGAAGTGCTaGCAGGTATCTCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: LLLHENTYRHSNLFEINVSLQKC*QVSLQQ
Trigger: TTGTTGAAGAGATACCTGCCAGCACTTCTGCAAGCT...CACATTAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CTCCTGCTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTAATGTGACTCTAAGGTGGGAATaGCACCATTTCCTAACCTCT +
Preference number: 4 (lower is better)
Translates to: LLLHENTYRHSNLFEINVTLRWE*HHFLTS
Trigger: AGAGGTTAGGAAATGGTGCCATTCCCACCTTAGAGT...CACATTAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCCCTCTAGAACTGCCCTaGTTTCCTCTTGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: EKDFFFLDNNGLSRVPIFPLELP*FPLALF
Trigger: GAAAAGGGCAAGAGGAAACCAGGGCAGTTCTAGAGG...GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCCAAATTTATTTTCAGTaGTGCCACAGGTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTQIYFQ*CHRWVC
Trigger: GCAAACCCACCTGTGGCATCACTGAAAATAAATTTG...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTACAGCTTCGCTGTGTTaGGGTTTGGTTCTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPITASLC*GLVLVK
Trigger: TTTTACCAGAACCAAACCTCAACACAGCGAAGCTGT...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTGTCAGCTCCACTGCTaGATTCCTGTTGACATTGGA +
Preference number: 4 (lower is better)
Translates to: EKDFFFLDNNGLSRVPIFCQLHC*IPVDIG
Trigger: TCCAATGTCAACAGGAATGCAGCAGTGGAGCTGACA...GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTACTATACATTGCATATaGACTGGGCCTCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPITIHCI*TGPQQI
Trigger: GATCTGCTGAGGCCCAGTGCATATGCAATGTATAGT...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp GAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCGTCCTACAAGCAGCCTaGAGATTCTTCTCCCTACAT +
Preference number: 4 (lower is better)
Translates to: EKDFFFLDNNGLSRVPIFVLQAA*RFFSLH
Trigger: ATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGAC...GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTGGCCGAATAGTGAAGGTAATATGCTGTGGTTCATCTaGTGGTCACTGGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HAFYKVIKRSGWPNSEGNMLWFI*WSLVSP
Trigger: TGGAGAAACCAGTGACCACCAGATGAACCACAGCAT...ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCATGCTGTGGTTCATCTaGTGGTCACTGGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: EKDFFFLDNNGLSRVPIFMLWFI*WSLVSP
Trigger: TGGAGAAACCAGTGACCACCAGATGAACCACAGCAT...GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCCTTCCCTTCACCTaGAATAAAGCAGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIFLPFT*NKAGLP
Trigger: TGGAAGTCCTGCTTTATTCCAGGTGAAGGGAAGGAA...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR GCA 90 bp CATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTGGCCGAATAGTGAAGGTAATATCCACCTCTGGGTTTaGTCGTGTGTTTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: HAFYKVIKRSGWPNSEGNIHLWV*SCVSEN
Trigger: GTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT...ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp CTCCTGCTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTAATGTGATTAAAAGGTCAGGCTaGCCGAATAGTGAAGGTAAT +
Preference number: 4 (lower is better)
Translates to: LLLHENTYRHSNLFEINVIKRSG*PNSEGN
Trigger: ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAAT...CACATTAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR TCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTCCATTGCAGAATCACTaGGAATTTCTCAATCCAGTT +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIPLQNH*EFLNPV
Trigger: AACTGGATTGAGAAATTCTCAGTGATTCTGCAATGG...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTTACAGTTGGGAGACTaGACAAAAATAGCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: EKDFFFLDNNGLSRVPIFLQLGD*TKIALS
Trigger: TGACAGCGCTATTTTTGTCCAGTCTCCCAACTGTAA...GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp GAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCTAAGTTACTAAATTaGGAAGAAGCGAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: EKDFFFLDNNGLSRVPIFSKLLN*EEARWG
Trigger: TCCCCACCTCGCTTCTTCCCAATTTAGTAACTTAGA...GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CCA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTATTAAAAGGTCAGGCTaGCCGAATAGTGAAGGTAAT +
Preference number: 4 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIIKRSG*PNSEGN
Trigger: ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAAT...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
3UTR CAA 72 bp AACATCAGAAATCTCATCACATTTGAGCTGTATGACTaGCCAAAAGTATATACACTTCCTTCCCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: NIRNLITFELYD*PKVYTLPSLHL
Trigger: CAGGTGAAGGGAAGGAAGTGTATATACTTTTGGCAAGTCATACAGCTCAAATGTGATGAGATTTCTGATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS GCA 90 bp TCCCACGGCGAAGAGAAGAGCGGCCGGGCGGGCGGACGGCAGCAGTaGAGGGTCGGGAAGGCCCCGAACGCGGGGCGGAGGCGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: SHGEEKSGRAGGRQQ*RVGKAPNAGRRRRP
Trigger: CGGCCGCCGCCTCCGCCCCGCGTTCGGGGCCTTCCCGACCCTGCACTGCTGCCGTCCGCCCGCCCGGCCGCTCTTCTCTTCGCCGTGGGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS GCA 90 bp CAGGCAGTGCCCCCAGAGACGGGCTGGCCGAAAGGCTACTGGGCCTaGCGTCCCCACAGGAAGCTTGGCAGAGGGCCCAGTGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: QAVPPETGWPKGYWA*RPHRKLGRGPSAPS
Trigger: GGAGGGTGCACTGGGCCCTCTGCCAAGCTTCCTGTGGGGACGGCAGGCCCAGTAGCCTTTCGGCCAGCCCGTCTCTGGGGGCACTGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558763.1
CDS CCA 90 bp GGGGCGGAGGCGGCGGCCGCGAGACTCCAAGTGGCAGCAGAAGTTTaGGTTTCCGCACGGGGTAGCTGTTTGGGTGCCGCCTCCGGGAAG +
Preference number: 5 (lower is better)
Translates to: GAEAAAARLQVAAEV*VSARGSCLGAASGK
Trigger: CTTCCCGGAGGCGGCACCCAAACAGCTACCCCGTGCGGAAACCCAAACTTCTGCTGCCACTTGGAGTCTCGCGGCCGCCGCCTCCGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR CAA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCAGCACGGGGTAGCTGTTaGGGTGCCGCCTCCGGGAAG +
Preference number: 5 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPARGSC*GAASGK
Trigger: CTTCCCGGAGGCGGCACCCAAACAGCTACCCCGTGC...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS TCA 90 bp GGGGGTGGGGTCTCCGCGGGACGCCAGGGCTACCCGCAAAGGATCTaGGAAGGTTGGACAGTGGGTCTCCTCCTTAACACTCTGACCCAA +
Preference number: 5 (lower is better)
Translates to: GGGVSAGRQGYPQRI*EGWTVGLLLNTLTQ
Trigger: TTGGGTCAGAGTGTTAAGGAGGAGACCCACTGTCCAACCTTCTCAGATCCTTTGCGGGTAGCCCTGGCGTCCCGCGGAGACCCCACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537194.6
CDS CCA 90 bp AGAACACTGTCCCATCTCCATGGGCTGCCTGACCCTCCTCCACACTaGCCCCCTCAGGAACGGAGTCCACCCTCCCATCCATGTATGCCC +
Preference number: 5 (lower is better)
Translates to: RTLSHLHGLPDPPPH*PPQERSPPSHPCMP
Trigger: GGGCATACATGGATGGGAGGGTGGACTCCGTTCCTGAGGGGGCCAGTGTGGAGGAGGGTCAGGCAGCCCATGGAGATGGGACAGTGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559092.1
CDS GCA 90 bp TTCTTGACCAGGCTCTTGACCGCCTTCTCGCACCATTTCTCCTCCTaGCCGTTCTGCTCGCCCTTCTTCCAGCCCAGCAGGCGCTTCACG +
Preference number: 5 (lower is better)
Translates to: FLTRLLTAFSHHFSS*PFCSPFFQPSRRFT
Trigger: CGTGAAGCGCCTGCTGGGCTGGAAGAAGGGCGAGCAGAACGGGCAGGAGGAGAAATGGTGCGAGAAGGCGGTCAAGAGCCTGGTCAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS CCA 90 bp TCCAAGTGGCAGCAGAAGTTTGGGTTTCCGCACGGGGTAGCTGTTTaGGTGCCGCCTCCGGGAAGGAAAGTCCAACCCCCGGCCAAACTT +
Preference number: 5 (lower is better)
Translates to: SKWQQKFGFPHGVAV*VPPPGRKVQPPAKL
Trigger: AAGTTTGGCCGGGGGTTGGACTTTCCTTCCCGGAGGCGGCACCCAAACAGCTACCCCGTGCGGAAACCCAAACTTCTGCTGCCACTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS CCA 90 bp CAACACAGGCCCGAGTGTGGGTTTCCATGCAGTTGTCCCATCCTGTaGGAATGTCGCATCCTGTGGGAACCCAGCGTGTGGGGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: QHRPECGFPCSCPIL*ECRILWEPSVWGSW
Trigger: CCAGGAACCCCACACGCTGGGTTCCCACAGGATGCGACATTCCCACAGGATGGGACAACTGCATGGAAACCCACACTCGGGCCTGTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS CCA 90 bp GTAGTAGGAGATGGAGCACCAGAAGGCCGGCTCGCAGTAGGTAACTaGCTGCAGGTCTGTGGACACAGGGTGGGCTACTGGGTCATTGGG +
Preference number: 5 (lower is better)
Translates to: VVGDGAPEGRLAVGN*LQVCGHRVGYWVIG
Trigger: CCCAATGACCCAGTAGCCCACCCTGTGTCCACAGACCTGCAGCCAGTTACCTACTGCGAGCCGGCCTTCTGGTGCTCCATCTCCTACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680689.1
CDS-3UTR CAA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCCAACTCTCGGCGAAGTaGCCGGGGCGCCGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: FITSTSGFARVFQKTGGCQLSAK*PGRRAG
Trigger: CCCGGCCCGGCGCCCCGGCAACTTCGCCGAGAGTTG...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS GCA 90 bp GGTGAAGCGAGCGGCGGCAATAAATTACCCCAGTGCCGCGGCTCTTaGCCACATGTTGCTCTTATGGTCAGTGCGCTTCAGCCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: GEASGGNKLPQCRGS*PHVALMVSALQPSS
Trigger: ACTGCTGGGCTGAAGCGCACTGACCATAAGAGCAACATGTGGGCAAGAGCCGCGGCACTGGGGTAATTTATTGCCGCCGCTCGCTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS CCA 90 bp CCCCCACCACCCGAGCGCATCTCTGGCTGTCTTTCCATCTTGAGCTaGGTCGGCCTCTCCACTAAATCCATCCACTGGCATGACTTCAGC +
Preference number: 5 (lower is better)
Translates to: PPPPERISGCLSILS*VGLSTKSIHWHDFS
Trigger: GCTGAAGTCATGCCAGTGGATGGATTTAGTGGAGAGGCCGACCCAGCTCAAGATGGAAAGACAGCCAGAGATGCGCTCGGGTGGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560402.1
CDS-3UTR CAA 90 bp TGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCCTCGCCTCGCTAGCTTaGATGCGCAGATCCCTCCGC +
Preference number: 5 (lower is better)
Translates to: CSLKPPEQTPFLALQSGALASLA*MRRSLR
Trigger: GCGGAGGGATCTGCGCATCAAAGCTAGCGAGGCGAG...GGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR CAA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGCATCCTGGTGGGATCTaGCAGACGGTGGCCGGGTGC +
Preference number: 5 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREHPGGI*QTVAGC
Trigger: GCACCCGGCCACCGTCTGCAAGATCCCACCAGGATG...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS TCA 90 bp AGGAACCCCCACCACCCGAGCGCATCTCTGGCTGTCTTTCCATCTTaGGCTGGGTCGGCCTCTCCACTAAATCCATCCACTGGCATGACT +
Preference number: 5 (lower is better)
Translates to: RNPHHPSASLAVFPS*AGSASPLNPSTGMT
Trigger: AGTCATGCCAGTGGATGGATTTAGTGGAGAGGCCGACCCAGCTCAAGATGGAAAGACAGCCAGAGATGCGCTCGGGTGGTGGGGGTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560402.1
CDS GCA 90 bp TGTGGGGTTCCTGGTGAAGCGAGCGGCGGCAATAAATTACCCCAGTaGCGCGGCTCTTGCCCACATGTTGCTCTTATGGTCAGTGCGCTT +
Preference number: 5 (lower is better)
Translates to: CGVPGEASGGNKLPQ*RGSCPHVALMVSAL
Trigger: AAGCGCACTGACCATAAGAGCAACATGTGGGCAAGAGCCGCGGCACTGGGGTAATTTATTGCCGCCGCTCGCTTCACCAGGAACCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS-3UTR CAA 90 bp GCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCATCCGCTCCCCAGCCTTaGACGAAGCTCATGCGGATG +
Preference number: 5 (lower is better)
Translates to: AHLSHQSRRHFLPFKVGPSAPQP*TKLMRM
Trigger: CATCCGCATGAGCTTCGTCAAAGGCTGGGGAGCGGA...TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCAATCTGGGTGAGGACCTaGTCAAGCCACTGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPIWVRT*SSHCKG
Trigger: GCCTTTGCAGTGGCTTGACAAGGTCCTCACCCAGAT...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGGTGTCCTCAGGAGGCTaGGGGAGCAGCTGTCCTACC +
Preference number: 5 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLVSSGG*GSSCPT
Trigger: GGTAGGACAGCTGCTCCCCAAGCCTCCTGAGGACAC...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GCTGAGCCAAAAAGCCACTACACCCTCCACCAACATTCAGAACTGGCTGTGCCCGCAAGGGAGTGGGGCTaGGTTCAGAGGACCCTTGTG +
Preference number: 5 (lower is better)
Translates to: AEPKSHYTLHQHSELAVPAREWG*VQRTLV
Trigger: CACAAGGGTCCTCTGAACCAAGCCCCACTCCCTTGC...GGGCACAGCCAGTTCTGAATGTTGGTGGAGGGTGTAGTGGCTTTTTGGCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS TCA 90 bp TTGCCCACATGTTGCTCTTATGGTCAGTGCGCTTCAGCCCAGCAGTaGCCTAACCCCAGCACCAGTGAACTCAGCAGCAGGCTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: LPTCCSYGQCASAQQ*PNPSTSELSSRLLC
Trigger: ACAGAGGAGCCTGCTGCTGAGTTCACTGGTGCTGGGGTTAGGTCACTGCTGGGCTGAAGCGCACTGACCATAAGAGCAACATGTGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS GCA 90 bp ACAGTTGGGAGACTGGACAAAAATAGCGCTGTCACTGAGGCACTCTaGGAAGACCTCCCCTCCGATGTAGTAGAGCCGCACGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: TVGRLDKNSAVTEAL*EDLPSDVVEPHASS
Trigger: GGAAGAGGCGTGCGGCTCTACTACATCGGAGGGGAGGTCTTCGCAGAGTGCCTCAGTGACAGCGCTATTTTTGTCCAGTCTCCCAACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000680689.1
ENST00000681239.1
CDS GCA 90 bp ATCCAGGGACCTCCCCATCCACCATGCTTTCCGGTGTACCAGAGCTaGGCCTTTCCACGTTTGCCTAGGGTGCAGGCAAGACATGTTTGT +
Preference number: 5 (lower is better)
Translates to: IQGPPHPPCFPVYQS*AFPRLPRVQARHVC
Trigger: ACAAACATGTCTTGCCTGCACCCTAGGCAAACGTGGAAAGGCGCAGCTCTGGTACACCGGAAAGCATGGTGGATGGGGAGGTCCCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439724.7
CDS GCA 90 bp GACTCAAACGTGGTTGCTCAACACAGGCCCGAGTGTGGGTTTCCATaGAGTTGTCCCATCCTGTGGGAATGTCGCATCCTGTGGGAACCC +
Preference number: 5 (lower is better)
Translates to: DSNVVAQHRPECGFP*SCPILWECRILWEP
Trigger: GGGTTCCCACAGGATGCGACATTCCCACAGGATGGGACAACTGCATGGAAACCCACACTCGGGCCTGTGTTGAGCAACCACGTTTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS CCA 90 bp GCCATCCAGGGACTCAAACGTGGTTGCTCAACACAGGCCCGAGTGTaGGTTTCCATGCAGTTGTCCCATCCTGTGGGAATGTCGCATCCT +
Preference number: 5 (lower is better)
Translates to: AIQGLKRGCSTQARV*VSMQLSHPVGMSHP
Trigger: AGGATGCGACATTCCCACAGGATGGGACAACTGCATGGAAACCCACACTCGGGCCTGTGTTGAGCAACCACGTTTGAGTCCCTGGATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS-3UTR CAA 90 bp TCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCAGAAGCGCTCCGAATaGGAGGGGTCGGTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: SAHLSHQSRRHFLPFKVGQKRSE*EGSVKP
Trigger: TGGCTTCACCGACCCCTCCAATTCGGAGCGCTTCTG...CCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GAGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAGAACACTTACCTCCGCTCCCCAGCCTTaGACGAAGCTCATGCGGATG +
Preference number: 5 (lower is better)
Translates to: ETKCHPTTRASCFMRTLTSAPQP*TKLMRM
Trigger: CATCCGCATGAGCTTCGTCAAAGGCTGGGGAGCGGA...GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGTCCGCTCCCCAGCCTTaGACGAAGCTCATGCGGATG +
Preference number: 5 (lower is better)
Translates to: SAHLSHQSRRHFLPFKVGSAPQP*TKLMRM
Trigger: CATCCGCATGAGCTTCGTCAAAGGCTGGGGAGCGGA...CCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGTGTCCTCAGGAGGCTaGGGGAGCAGCTGTCCTACC +
Preference number: 5 (lower is better)
Translates to: FCSLKPPEQTPFLALQSGVSSGG*GSSCPT
Trigger: GGTAGGACAGCTGCTCCCCAAGCCTCCTGAGGACAC...CCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTGTGTCCTCAGGAGGCTaGGGGAGCAGCTGTCCTACC +
Preference number: 5 (lower is better)
Translates to: NIRTMETSASSLALMCALVSSGG*GSSCPT
Trigger: GGTAGGACAGCTGCTCCCCAAGCCTCCTGAGGACAC...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCGCAAGGGAGTGGGGCTaGGTTCAGAGGACCCTTGTG +
Preference number: 5 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFAREWG*VQRTLV
Trigger: CACAAGGGTCCTCTGAACCAAGCCCCACTCCCTTGC...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGGCAAGGGAGTGGGGCTaGGTTCAGAGGACCCTTGTG +
Preference number: 5 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVAREWG*VQRTLV
Trigger: CACAAGGGTCCTCTGAACCAAGCCCCACTCCCTTGC...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCTGCGCCTTTCCACGTTaGCCTAGGGTGCAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: CSLKPPEQTPFLALQSGACAFPR*PRVQAR
Trigger: TCTTGCCTGCACCCTAGGCAAACGTGGAAAGGCGCA...GGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439724.7
CDS GCA 90 bp ACTGGCGACTCGCCAGGGCTGCAGCTAGAGGGGGTTCCAGTTGTGTaGACAAGGAGATACTCACCCAAGTTATTATGTGCTGGGGACATC +
Preference number: 5 (lower is better)
Translates to: TGDSPGLQLEGVPVV*TRRYSPKLLCAGDI
Trigger: GATGTCCCCAGCACATAATAACTTGGGTGAGTATCTCCTTGTGCACACAACTGGAACCCCCTCTAGCTGCAGCCCTGGCGAGTCGCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559937.1
CDS-3UTR CAA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGGGGGTCTCTGGAATATaGCTCTGGGGCTCGATGCCT +
Preference number: 5 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREGVSGI*LWGSMP
Trigger: AGGCATCGAGCCCCAGAGCAATATTCCAGAGACCCC...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCATCCTGGTGGGATCTaGCAGACGGTGGCCGGGTGC +
Preference number: 5 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFHPGGI*QTVAGC
Trigger: GCACCCGGCCACCGTCTGCAAGATCCCACCAGGATG...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CTACAAGGGAACATCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTTGAGGCATCCTGGTGGGATCTaGCAGACGGTGGCCGGGTGC +
Preference number: 5 (lower is better)
Translates to: LQGNIFATQRQYSFAVLRHPGGI*QTVAGC
Trigger: GCACCCGGCCACCGTCTGCAAGATCCCACCAGGATG...CCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAGGGGTGTTTCTGGTaGGACTGTGACATCCCAGAA +
Preference number: 5 (lower is better)
Translates to: SRWIMQALGNCCPWLLGEEGCFW*DCDIPE
Trigger: TTCTGGGATGTCACAGTCCAACCAGAAACACCCCTC...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTAGGGAAATCTCATCACATTaGAGCTGTATGACTTGCCAA +
Preference number: 5 (lower is better)
Translates to: CHGGEPRAGATHAVVLTREISSH*SCMTCQ
Trigger: TTGGCAAGTCATACAGCTCAAATGTGATGAGATTTC...CCTAGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp AGATGTCATGGCGGGGAGCCCAGGGCAGGGGCAACACACGCGGTCGTGTTGACTACTAAGAAAACTAGCTaGTGGCTTCAAGGAAGGACA +
Preference number: 5 (lower is better)
Translates to: RCHGGEPRAGATHAVVLTTKKTS*WLQGRT
Trigger: TGTCCTTCCTTGAAGCCACAAGCTAGTTTTCTTAGT...AGTCAACACGACCGCGTGTGTTGCCCCTGCCCTGGGCTCCCCGCCATGACATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GGGGGCCGGTGGTGTAATACTACCTGTTCTGCTCACTTAAGCCACCAGAGCAGACTGCTGGTATCCCCCTaGGTGAACAGTCCTACAAGC +
Preference number: 5 (lower is better)
Translates to: GGRWCNTTCSAHLSHQSRLLVSP*VNSPTS
Trigger: GCTTGTAGGACTGTTCACCAAGGGGGATACCAGCAG...TCTGCTCTGGTGGCTTAAGTGAGCAGAACAGGTAGTATTACACCACCGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGGGGACTCAAACGTGGTaGCTCAACACAGGCCCGAGT +
Preference number: 5 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLGTQTW*LNTGPS
Trigger: ACTCGGGCCTGTGTTGAGCAACCACGTTTGAGTCCC...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS GCA 90 bp ATCCACCATGCTTTCCGGTGTACCAGAGCTGCGCCTTTCCACGTTTaGCTAGGGTGCAGGCAAGACATGTTTGTGAAGTTGGGAGGTCAC +
Preference number: 5 (lower is better)
Translates to: IHHAFRCTRAAPFHV*LGCRQDMFVKLGGH
Trigger: GTGACCTCCCAACTTCACAAACATGTCTTGCCTGCACCCTAGGCAAACGTGGAAAGGCGCAGCTCTGGTACACCGGAAAGCATGGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439724.7
CDS GCA 90 bp ACATGGTGTGTGATGCATTTGCCACACACTCCACACTCAGTACCATaGAAAGGGAAGGCCAACCCAGTCCCTCCCCTTGAACCCATCTCC +
Preference number: 5 (lower is better)
Translates to: TWCVMHLPHTPHSVP*KGKANPVPPLEPIS
Trigger: GGAGATGGGTTCAAGGGGAGGGACTGGGTTGGCCTTCCCTTTGCATGGTACTGAGTGTGGAGTGTGTGGCAAATGCATCACACACCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558763.1
CDS-3UTR CAA 90 bp GTCACCGGTGATCCTCTACCGGGAGCTAGATCATCTTATATCCCAGGGGGAAGAGATTCGGGGATAGGTTaGGAGAACCTGCGTCCATGC +
Preference number: 5 (lower is better)
Translates to: VTGDPLPGARSSYIPGGRDSGIG*ENLRPC
Trigger: GCATGGACGCAGGTTCTCCAAACCTATCCCCGAATC...TCTTCCCCCTGGGATATAAGATGATCTAGCTCCCGGTAGAGGATCACCGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCGATTCGGGGATAGGTTaGGAGAACCTGCGTCCATGC +
Preference number: 5 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFDSGIG*ENLRPC
Trigger: GCATGGACGCAGGTTCTCCAAACCTATCCCCGAATC...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCCATCCTGGTGGGATCTaGCAGACGGTGGCCGGGTGC +
Preference number: 5 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFHPGGI*QTVAGC
Trigger: GCACCCGGCCACCGTCTGCAAGATCCCACCAGGATG...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGATCTGGGTGAGGACCTaGTCAAGCCACTGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLIWVRT*SSHCKG
Trigger: GCCTTTGCAGTGGCTTGACAAGGTCCTCACCCAGAT...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GTCACCGGTGATCCTCTACCGGGAGCTAGATCATCTTATATCCCAGGGGGAAGAAGCAGACGCCATTTCTaGCCCTTCAAAGTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: VTGDPLPGARSSYIPGGRSRRHF*PFKVGP
Trigger: TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCT...TCTTCCCCCTGGGATATAAGATGATCTAGCTCCCGGTAGAGGATCACCGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAGCAGACGCCATTTCTaGCCCTTCAAAGTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LSHQSRRHFLPFKVGPKGSRRHF*PFKVGP
Trigger: TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCT...ACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GGGGGCCGGTGGTGTAATACTACCTGTTCTGCTCACTTAAGCCACCAGAGCAGAGAGGGGTGTTTCTGGTaGGACTGTGACATCCCAGAA +
Preference number: 5 (lower is better)
Translates to: GGRWCNTTCSAHLSHQSREGCFW*DCDIPE
Trigger: TTCTGGGATGTCACAGTCCAACCAGAAACACCCCTC...TCTGCTCTGGTGGCTTAAGTGAGCAGAACAGGTAGTATTACACCACCGGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACGTCTGCCAGCAGCCTaGCCCTCATGTGTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: RHFLPFKVGPKGKCVWQTRLPAA*PSCVLF
Trigger: GAAGAGCACACATGAGGGCAAGGCTGCTGGCAGACG...TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACCGTCTGCCAGCAGCCTaGCCCTCATGTGTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHRLPAA*PSCVLF
Trigger: GAAGAGCACACATGAGGGCAAGGCTGCTGGCAGACG...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGCTGCTGGTATCCCCCTaGGTGAACAGTCCTACAAGC +
Preference number: 5 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLLLVSP*VNSPTS
Trigger: GCTTGTAGGACTGTTCACCAAGGGGGATACCAGCAG...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GTCACCGGTGATCCTCTACCGGGAGCTAGATCATCTTATATCCCAGGGGGAAGACTGCTGGTATCCCCCTaGGTGAACAGTCCTACAAGC +
Preference number: 5 (lower is better)
Translates to: VTGDPLPGARSSYIPGGRLLVSP*VNSPTS
Trigger: GCTTGTAGGACTGTTCACCAAGGGGGATACCAGCAG...TCTTCCCCCTGGGATATAAGATGATCTAGCTCCCGGTAGAGGATCACCGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGTTTAGCCAGCCTGGTTaGGTGTTTCTGGATGCTGAG +
Preference number: 5 (lower is better)
Translates to: SRWIMQALGNCCPWLLGEFSQPG*VFLDAE
Trigger: CTCAGCATCCAGAAACACCAAACCAGGCTGGCTAAA...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGTGGAAGGGCCCAGATTaGACTCAGAGCTGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: SRWIMQALGNCCPWLLGEWKGPD*TQSCLF
Trigger: AAACAGACAGCTCTGAGTCAAATCTGGGCCCTTCCA...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS CCA 90 bp CTGGACCCCCTAGACCAGCCTCATTTATACAGCTCCAGGGACACATaGTGTGTGATGCATTTGCCACACACTCCACACTCAGTACCATGC +
Preference number: 5 (lower is better)
Translates to: LDPLDQPHLYSSRDT*CVMHLPHTPHSVPC
Trigger: GCATGGTACTGAGTGTGGAGTGTGTGGCAAATGCATCACACACCATGTGTCCCTGGAGCTGTATAAATGAGGCTGGTCTAGGGGGTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558763.1
CDS-3UTR CAA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGGGGTCTCTGGAATATaGCTCTGGGGCTCGATGCCT +
Preference number: 5 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKGVSGI*LWGSMP
Trigger: AGGCATCGAGCCCCAGAGCAATATTCCAGAGACCCC...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAGAGAGACAGAAGCGCTCCGAATaGGAGGGGTCGGTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: AGRYLFNKTWKSFTSGERQKRSE*EGSVKP
Trigger: TGGCTTCACCGACCCCTCCAATTCGGAGCGCTTCTG...TCTCTCTCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACACATCCTGGTGGGATCTaGCAGACGGTGGCCGGGTGC +
Preference number: 5 (lower is better)
Translates to: TQLFITSTSGFARVFQKTHPGGI*QTVAGC
Trigger: GCACCCGGCCACCGTCTGCAAGATCCCACCAGGATG...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGTCCGCTCCCCAGCCTTaGACGAAGCTCATGCGGATG +
Preference number: 5 (lower is better)
Translates to: VHNIHLWVCSCVSENRWVSAPQP*TKLMRM
Trigger: CATCCGCATGAGCTTCGTCAAAGGCTGGGGAGCGGA...CACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp AATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCATGGCCATTTTCCCCTCCGCTCCCCAGCCTTaGACGAAGCTCATGCGGATG +
Preference number: 5 (lower is better)
Translates to: NGLSRVPIFSTSCMAIFPSAPQP*TKLMRM
Trigger: CATCCGCATGAGCTTCGTCAAAGGCTGGGGAGCGGA...GGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGAATCTGGGTGAGGACCTaGTCAAGCCACTGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERIWVRT*SSHCKG
Trigger: GCCTTTGCAGTGGCTTGACAAGGTCCTCACCCAGAT...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp AGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGCATCCACCTCTGGGTTaGCTCGTGTGTTTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: SRWIMQALGNCCPWLLGEHPPLG*LVCFRK
Trigger: TTTTCTGAAACACACGAGCAAACCCAGAGGTGGATG...CTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGAAGCAGACGCCATTTCTaGCCCTTCAAAGTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERSRRHF*PFKVGP
Trigger: TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCT...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGATGCCACAGGTGGGTTaGCCTACAATCCCACACATC +
Preference number: 5 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREMPQVG*PTIPHI
Trigger: GATGTGTGGGATTGTAGGCAAACCCACCTGTGGCAT...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCATGACTGCTCTAGCAATGCCACAGGTGGGTTaGCCTACAATCCCACACATC +
Preference number: 5 (lower is better)
Translates to: PRKLLPMAFRRGTMTALAMPQVG*PTIPHI
Trigger: GATGTGTGGGATTGTAGGCAAACCCACCTGTGGCAT...TGCTAGAGCAGTCATGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CTCATAGGATCGTGCAGCAGGTGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGATCCATGTCCTCTaGCGTACGTTTTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LIGSCSRWIMQALGNCCPWIHVL*RTFFCF
Trigger: AAAGCAGAAAAACGTACGCAAGAGGACATGGATCCA...TGGGCAGCAGTTTCCGAGGGCCTGCATGATCCACCTGCTGCACGATCCTATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCATGACTGCTCTAGCATTTACACGCGGCCACTaGTTTAGCCAGCCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: PRKLLPMAFRRGTMTALAFTRGH*FSQPGL
Trigger: CAAACCAGGCTGGCTAAACAAGTGGCCGCGTGTAAA...TGCTAGAGCAGTCATGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTTTACACGCGGCCACTaGTTTAGCCAGCCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVFTRGH*FSQPGL
Trigger: CAAACCAGGCTGGCTAAACAAGTGGCCGCGTGTAAA...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TGGATCATGCAGGCCCTCGGAAACTGCTGCCCATGGCTTTTAGGAGAGGAACCATGGAAGGGCCCAGATTaGACTCAGAGCTGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: WIMQALGNCCPWLLGEEPWKGPD*TQSCLF
Trigger: AAACAGACAGCTCTGAGTCAAATCTGGGCCCTTCCA...TGGTTCCTCTCCTAAAAGCCATGGGCAGCAGTTTCCGAGGGCCTGCATGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCTTTCCTGGTGGGATCTaGCAGACGGTGGCCGGGTGC +
Preference number: 5 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFFPGGI*QTVAGC
Trigger: GCACCCGGCCACCGTCTGCAAGATCCCACCAGGAAA...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560424.1
CDS-3UTR CAA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGATTCTTGACCAGGCTCTaGACCGCCTTCTCGCACCAT +
Preference number: 5 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRFLTRL*TAFSHH
Trigger: ATGGTGCGAGAAGGCGGTCAAGAGCCTGGTCAAGAA...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR CAA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGAGTCTTCTTGAGTTTCTaGACCAGGCTCTTGACCGCC +
Preference number: 5 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERVFLSF*TRLLTA
Trigger: GGCGGTCAAGAGCCTGGTCAAGAAACTCAAGAAGAC...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR CAA 90 bp TTCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGTGATGCACTTGGTGTaGACGTTCTGCGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: FCSLKPPEQTPFLALQSGVMHLV*TFCVVM
Trigger: CATCACCACGCAGAACGTCAACACCAAGTGCATCAC...CCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR CAA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTGGGGTCTCTGGAATATaGCTCTGGGGCTCGATGCCT +
Preference number: 5 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSGVSGI*LWGSMP
Trigger: AGGCATCGAGCCCCAGAGCAATATTCCAGAGACCCC...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACGATTCGGGGATAGGTTaGGAGAACCTGCGTCCATGC +
Preference number: 5 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHDSGIG*ENLRPC
Trigger: GCATGGACGCAGGTTCTCCAAACCTATCCCCGAATC...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCCATCCACCTCTGGGTTaGCTCGTGTGTTTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: CSLKPPEQTPFLALQSGAHPPLG*LVCFRK
Trigger: TTTTCTGAAACACACGAGCAAACCCAGAGGTGGATG...GGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACAAGCAGACGCCATTTCTaGCCCTTCAAAGTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: RHFLPFKVGPKGKCVWQTSRRHF*PFKVGP
Trigger: TGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCT...TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GGGGGCCGGTGGTGTAATACTACCTGTTCTGCTCACTTAAGCCACCAGAGCAGAGTGAGGGGTTTTGTATaGTCTCTGGGTTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: GGRWCNTTCSAHLSHQSRVRGFV*SLGSES
Trigger: TGACTCAGAACCCAGAGACAATACAAAACCCCTCAC...TCTGCTCTGGTGGCTTAAGTGAGCAGAACAGGTAGTATTACACCACCGGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCGCCAAAATGGAATATTaGGTTCCTGGGTCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: CSLKPPEQTPFLALQSGAAKMEY*VPGSQS
Trigger: GCTCTGAGACCCAGGAACCAAATATTCCATTTTGGC...GGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGTGCCCTGGTTTCCTCTaGCCCTTTTCAACTGTCCTT +
Preference number: 5 (lower is better)
Translates to: GLLVCFRKQVGAPLQLRECPGFL*PFSTVL
Trigger: AAGGACAGTTGAAAAGGGCAAGAGGAAACCAGGGCA...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGAACGGGTGCACTCTCTaGCTGCTGGTATCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: VHNIHLWVCSCVSENRWVNGCTL*LLVSPL
Trigger: CAAGGGGGATACCAGCAGCAAGAGAGTGCACCCGTT...CACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTGATTCGGGGATAGGTTaGGAGAACCTGCGTCCATGC +
Preference number: 5 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFDSGIG*ENLRPC
Trigger: GCATGGACGCAGGTTCTCCAAACCTATCCCCGAATC...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGTTGAAGATCTTCAGGTaGCATCCTGGTGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: GLLVCFRKQVGAPLQLRELKIFR*HPGGIL
Trigger: CAAGATCCCACCAGGATGCAACCTGAAGATCTTCAA...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCTTGAAGATCTTCAGGTaGCATCCTGGTGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFLKIFR*HPGGIL
Trigger: CAAGATCCCACCAGGATGCAACCTGAAGATCTTCAA...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CTACAAGGGAACATCTTTGCCACACAAAGACAGTACAGCTTCGCTGTGTTGAGGATCTGGGTGAGGACCTaGTCAAGCCACTGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: LQGNIFATQRQYSFAVLRIWVRT*SSHCKG
Trigger: GCCTTTGCAGTGGCTTGACAAGGTCCTCACCCAGAT...CCTCAACACAGCGAAGCTGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGATCTGGGTGAGGACCTaGTCAAGCCACTGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: VHNIHLWVCSCVSENRWVIWVRT*SSHCKG
Trigger: GCCTTTGCAGTGGCTTGACAAGGTCCTCACCCAGAT...CACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGCCTCCCCTACCATACTaGATGTCTCTAAGACACACT +
Preference number: 5 (lower is better)
Translates to: GLLVCFRKQVGAPLQLREPPLPY*MSLRHT
Trigger: AGTGTGTCTTAGAGACATCAAGTATGGTAGGGGAGG...CTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGAGGTGCACCCCTTCAGTaGAGGGAGAAAGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERGAPLQ*REKDFF
Trigger: GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACC...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp ACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGGGTGCACCCCTTCAGTaGAGGGAGAAAGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: TRADAISCPSKWGQRVNVGAPLQ*REKDFF
Trigger: GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACC...CACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGCATCCACCTCTGGGTTaGCTCGTGTGTTTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLHPPLG*LVCFRK
Trigger: TTTTCTGAAACACACGAGCAAACCCAGAGGTGGATG...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACGAGGGGTGTTTCTGGTaGGACTGTGACATCCCAGAA +
Preference number: 5 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHEGCFW*DCDIPE
Trigger: TTCTGGGATGTCACAGTCCAACCAGAAACACCCCTC...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGGTGAGGGGTTTTGTATaGTCTCTGGGTTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: SAHLSHQSRRHFLPFKVGVRGFV*SLGSES
Trigger: TGACTCAGAACCCAGAGACAATACAAAACCCCTCAC...CCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTAGCCAGCCTGGTTaGGTGTTTCTGGATGCTGAG +
Preference number: 5 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERFSQPG*VFLDAE
Trigger: CTCAGCATCCAGAAACACCAAACCAGGCTGGCTAAA...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp AACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTGCTCTTTGGAAGGGCCCAGATTaGACTCAGAGCTGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: NIRTMETSASSLALMCALWKGPD*TQSCLF
Trigger: AAACAGACAGCTCTGAGTCAAATCTGGGCCCTTCCA...AAGAGCACACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAATGGGTTTCCATGCAGTaGTCCCATCCTGTGGGAATG +
Preference number: 5 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKWVSMQ*SHPVGM
Trigger: CATTCCCACAGGATGGGACAACTGCATGGAAACCCA...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS-3UTR CAA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGTTGAAGATCTTCAGGTaGCATCCTGCAAGGGGAGAT +
Preference number: 5 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLLKIFR*HPARGD
Trigger: ATCTCCCCTTGCAGGATGCAACCTGAAGATCTTCAA...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560424.1
CDS-3UTR CAA 90 bp GTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTAGCTGCCCCGTCTTCTaGAGTTTCTTGACCAGGCTC +
Preference number: 5 (lower is better)
Translates to: VFQKTGGCTPSVEGERFLSCPVF*SFLTRL
Trigger: GAGCCTGGTCAAGAAACTCAAGAAGACGGGGCAGCT...AAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR CAA 90 bp GTGAAGGTGAGTGAAGGCTTCTTGGATAGATGGCTCCATCTCTCTGTAATGCTTGATTCGGGGATAGGTTaGGAGAACCTGCGTCCATGC +
Preference number: 5 (lower is better)
Translates to: VKVSEGFLDRWLHLSVMLDSGIG*ENLRPC
Trigger: GCATGGACGCAGGTTCTCCAAACCTATCCCCGAATC...AAGCATTACAGAGAGATGGAGCCATCTATCCAAGAAGCCTTCACTCACCTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTATCTGGGTGAGGACCTaGTCAAGCCACTGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: VFQKTGGCTPSVEGERFLIWVRT*SSHCKG
Trigger: GCCTTTGCAGTGGCTTGACAAGGTCCTCACCCAGAT...AAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACAGGTGCACCCCTTCAGTaGAGGGAGAAAGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: RHFLPFKVGPKGKCVWQTGAPLQ*REKDFF
Trigger: GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACC...TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GGGGGCTTCCTGTGTAAGAAACAGGCCATAGATCATTTCACACCAGGCACATACGGTGCACCCCTTCAGTaGAGGGAGAAAGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: GGFLCKKQAIDHFTPGTYGAPLQ*REKDFF
Trigger: GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACC...GTATGTGCCTGGTGTGAAATGATCTATGGCCTGTTTCTTACACAGGAAGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGACATCCACCTCTGGGTTaGCTCGTGTGTTTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: ARVFQKTGGCTPSVEGERHPPLG*LVCFRK
Trigger: TTTTCTGAAACACACGAGCAAACCCAGAGGTGGATG...TCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGTCTGTAAATTTCAGCTaGCAGAAGTGCTGGCAGGTA +
Preference number: 5 (lower is better)
Translates to: SAHLSHQSRRHFLPFKVGSVNFS*QKCWQV
Trigger: TACCTGCCAGCACTTCTGCAAGCTGAAATTTACAGA...CCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGTGCTGGGAGCAGTACTaGTTACACAATACAACTGCT +
Preference number: 5 (lower is better)
Translates to: PLGLLVCFRKQVGAPLQLCWEQY*LHNTTA
Trigger: AGCAGTTGTATTGTGTAACAAGTACTGCTCCCAGCA...CAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGTGAGGGGTTTTGTATaGTCTCTGGGTTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: FCSLKPPEQTPFLALQSGVRGFV*SLGSES
Trigger: TGACTCAGAACCCAGAGACAATACAAAACCCCTCAC...CCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGCCAAAATGGAATATTaGGTTCCTGGGTCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: HQSRRHFLPFKVGPKGKCAKMEY*VPGSQS
Trigger: GCTCTGAGACCCAGGAACCAAATATTCCATTTTGGC...ACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCACTAAGAAAACTAGCTaGTGGCTTCAAGGAAGGACA +
Preference number: 5 (lower is better)
Translates to: CSLKPPEQTPFLALQSGATKKTS*WLQGRT
Trigger: TGTCCTTCCTTGAAGCCACAAGCTAGTTTTCTTAGT...GGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GGGGGCTTCCTGTGTAAGAAACAGGCCATAGATCATTTCACACCAGGCACATACTGCCCTGGTTTCCTCTaGCCCTTTTCAACTGTCCTT +
Preference number: 5 (lower is better)
Translates to: GGFLCKKQAIDHFTPGTYCPGFL*PFSTVL
Trigger: AAGGACAGTTGAAAAGGGCAAGAGGAAACCAGGGCA...GTATGTGCCTGGTGTGAAATGATCTATGGCCTGTTTCTTACACAGGAAGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGAGTGAGTGAAGGCTTCTaGGATAGATGGCTCCATCTC +
Preference number: 5 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRVSEGF*DRWLHL
Trigger: GAGATGGAGCCATCTATCCAAGAAGCCTTCACTCAC...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CTTGCCAAAAGTATATACACTTCCTTCCCTTCACCTGGAATAAAGCAGGACTTCGGGGTCTCTGGAATATaGCTCTGGGGCTCGATGCCT +
Preference number: 5 (lower is better)
Translates to: LAKSIYTSFPSPGIKQDFGVSGI*LWGSMP
Trigger: AGGCATCGAGCCCCAGAGCAATATTCCAGAGACCCC...GAAGTCCTGCTTTATTCCAGGTGAAGGGAAGGAAGTGTATATACTTTTGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCCAGAAGCGCTCCGAATaGGAGGGGTCGGTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTQKRSE*EGSVKP
Trigger: TGGCTTCACCGACCCCTCCAATTCGGAGCGCTTCTG...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CTCCTGCTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTAATGTGCAGAAGCGCTCCGAATaGGAGGGGTCGGTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: LLLHENTYRHSNLFEINVQKRSE*EGSVKP
Trigger: TGGCTTCACCGACCCCTCCAATTCGGAGCGCTTCTG...CACATTAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCGCTCCCCAGCCTTaGACGAAGCTCATGCGGATG +
Preference number: 5 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTSAPQP*TKLMRM
Trigger: CATCCGCATGAGCTTCGTCAAAGGCTGGGGAGCGGA...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACACCCTCCCCTACCATACTaGATGTCTCTAAGACACACT +
Preference number: 5 (lower is better)
Translates to: AISCPSKWGQRVNVFGRHPPLPY*MSLRHT
Trigger: AGTGTGTCTTAGAGACATCAAGTATGGTAGGGGAGG...GTGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAACCTCCCCTACCATACTaGATGTCTCTAAGACACACT +
Preference number: 5 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKPPLPY*MSLRHT
Trigger: AGTGTGTCTTAGAGACATCAAGTATGGTAGGGGAGG...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTGGTGCACCCCTTCAGTaGAGGGAGAAAGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: RVFQKTGGCTPSVEGERFGAPLQ*REKDFF
Trigger: GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACC...AAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAACATCCACCTCTGGGTTaGCTCGTGTGTTTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: LLVCFRKQVGAPLQLREKHPPLG*LVCFRK
Trigger: TTTTCTGAAACACACGAGCAAACCCAGAGGTGGATG...TTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGTGCTGGGAGCAGTACTaGTTACACAATACAACTGCT +
Preference number: 5 (lower is better)
Translates to: FCSLKPPEQTPFLALQSGCWEQY*LHNTTA
Trigger: AGCAGTTGTATTGTGTAACAAGTACTGCTCCCAGCA...CCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCATGCCACAGGTGGGTTaGCCTACAATCCCACACATC +
Preference number: 5 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFMPQVG*PTIPHI
Trigger: GATGTGTGGGATTGTAGGCAAACCCACCTGTGGCAT...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TCTGCTCACTTAAGCCACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGACTAAGAAAACTAGCTaGTGGCTTCAAGGAAGGACA +
Preference number: 5 (lower is better)
Translates to: SAHLSHQSRRHFLPFKVGTKKTS*WLQGRT
Trigger: TGTCCTTCCTTGAAGCCACAAGCTAGTTTTCTTAGT...CCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTGGCTTAAGTGAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CTTGCCAAAAGTATATACACTTCCTTCCCTTCACCTGGAATAAAGCAGGACTTCAACGGGTGCACTCTCTaGCTGCTGGTATCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: LAKSIYTSFPSPGIKQDFNGCTL*LLVSPL
Trigger: CAAGGGGGATACCAGCAGCAAGAGAGTGCACCCGTT...GAAGTCCTGCTTTATTCCAGGTGAAGGGAAGGAAGTGTATATACTTTTGGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCATGTGTACAAGGGAACATCTTaGCCACACAAAGACAGTACA +
Preference number: 5 (lower is better)
Translates to: HRQHKDNGDVCQQPCPHVYKGTS*PHKDST
Trigger: TGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTA...CACATGAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GAGACCAAATGCCATCCCACGACAAGGGCCTCCTGCTTCATGAGAACACTTACCTACAAGGGAACATCTTaGCCACACAAAGACAGTACA +
Preference number: 5 (lower is better)
Translates to: ETKCHPTTRASCFMRTLTYKGTS*PHKDST
Trigger: TGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTA...GGTAAGTGTTCTCATGAAGCAGGAGGCCCTTGTCGTGGGATGGCATTTGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTTGGATCCATGTCCTCTaGCGTACGTTTTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: HQSRRHFLPFKVGPKGKCWIHVL*RTFFCF
Trigger: AAAGCAGAAAAACGTACGCAAGAGGACATGGATCCA...ACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCGCTCTTGCCCACATGTaGCTCTTATGGTCAGTGCGC +
Preference number: 5 (lower is better)
Translates to: FFLDNNGLSRVPIFSTSCALAHM*LLWSVR
Trigger: GCGCACTGACCATAAGAGCAACATGTGGGCAAGAGC...GCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS-3UTR CAA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGTCGTCCTTCTTCATATaGAAGGCGAACTCACACAGC +
Preference number: 5 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWSSFFI*KANSHS
Trigger: GCTGTGTGAGTTCGCCTTCAATATGAAGAAGGACGA...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCTCGTCCTTCTTCATATaGAAGGCGAACTCACACAGC +
Preference number: 5 (lower is better)
Translates to: FITSTSGFARVFQKTGGCSSFFI*KANSHS
Trigger: GCTGTGTGAGTTCGCCTTCAATATGAAGAAGGACGA...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCGATTCGGGGATAGGTTaGGAGAACCTGCGTCCATGC +
Preference number: 5 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSDSGIG*ENLRPC
Trigger: GCATGGACGCAGGTTCTCCAAACCTATCCCCGAATC...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGTTGAAGATCTTCAGGTaGCATCCTGGTGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: VHNIHLWVCSCVSENRWVLKIFR*HPGGIL
Trigger: CAAGATCCCACCAGGATGCAACCTGAAGATCTTCAA...CACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGTTGAAGATCTTCAGGTaGCATCCTGGTGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWLKIFR*HPGGIL
Trigger: CAAGATCCCACCAGGATGCAACCTGAAGATCTTCAA...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTTTGAAGATCTTCAGGTaGCATCCTGGTGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSLKIFR*HPGGIL
Trigger: CAAGATCCCACCAGGATGCAACCTGAAGATCTTCAA...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGCCTCCCCTACCATACTaGATGTCTCTAAGACACACT +
Preference number: 5 (lower is better)
Translates to: AVHNIHLWVCSCVSENRWPPLPY*MSLRHT
Trigger: AGTGTGTCTTAGAGACATCAAGTATGGTAGGGGAGG...CCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp ATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCACCCCTTCCTTGACAACAATGGGTaGAGTAGAGTTCCAATTTTC +
Preference number: 5 (lower is better)
Translates to: IHLWVCSCVSENRWVHPFLDNNG*SRVPIF
Trigger: GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAG...GAAGGGGTGCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGTGCACCCCTTCAGTaGAGGGAGAAAGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: QLFITSTSGFARVFQKTGGAPLQ*REKDFF
Trigger: GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACC...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CACCAGAGCAGACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTAATAGACACTATACATaGCATATGCACTGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: HQSRRHFLPFKVGPKGKCNRHYT*HMHWAS
Trigger: TGAGGCCCAGTGCATATGCAATGTATAGTGTCTATT...ACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTCTGCTCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGACATCTGTAAATTTCAGCTaGCAGAAGTGCTGGCAGGTA +
Preference number: 5 (lower is better)
Translates to: RHFLPFKVGPKGKCVWQTSVNFS*QKCWQV
Trigger: TACCTGCCAGCACTTCTGCAAGCTGAAATTTACAGA...TGTCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GTCACCGGTGATCCTCTACCGGGAGCTAGATCATCTTATATCCCAGGGGGAAGAAGAATAAAGTACCAATaGAAGGTGGCAGTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: VTGDPLPGARSSYIPGGRRIKYQ*KVAVLS
Trigger: AGACAGAACTGCCACCTTCAATTGGTACTTTATTCT...TCTTCCCCCTGGGATATAAGATGATCTAGCTCCCGGTAGAGGATCACCGGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGGCCAAAATGGAATATTaGGTTCCTGGGTCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: VHNIHLWVCSCVSENRWVAKMEY*VPGSQS
Trigger: GCTCTGAGACCCAGGAACCAAATATTCCATTTTGGC...CACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTCTGACTCCTCTAGGCTaGTCTCAAAATGTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSLTPLG*SQNVRS
Trigger: AGACCTGACATTTTGAGACAAGCCTAGAGGAGTCAG...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCCTGACTCCTCTAGGCTaGTCTCAAAATGTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: FITSTSGFARVFQKTGGCLTPLG*SQNVRS
Trigger: AGACCTGACATTTTGAGACAAGCCTAGAGGAGTCAG...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CTCCTGCTTCATGAGAACACTTACCGTCATTCGAATCTCTTTGAGATTAATGTGAACGGGTGCACTCTCTaGCTGCTGGTATCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: LLLHENTYRHSNLFEINVNGCTL*LLVSPL
Trigger: CAAGGGGGATACCAGCAGCAAGAGAGTGCACCCGTT...CACATTAATCTCAAAGAGATTCGAATGACGGTAAGTGTTCTCATGAAGCAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAATGGATCCATGTCCTCTaGCGTACGTTTTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: QSYKQPADSSPYISCKDEWIHVL*RTFFCF
Trigger: AAAGCAGAAAAACGTACGCAAGAGGACATGGATCCA...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCTTTAGCCAGCCTGGTTaGGTGTTTCTGGATGCTGAG +
Preference number: 5 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFFSQPG*VFLDAE
Trigger: CTCAGCATCCAGAAACACCAAACCAGGCTGGCTAAA...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCGGGATGGTGATGCACTaGGTGTTGACGTTCTGCGTG +
Preference number: 5 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTGMVMH*VLTFCV
Trigger: CACGCAGAACGTCAACACCAAGTGCATCACCATCCC...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS-3UTR CAA 90 bp CATGCTTTTTACAAAGTTATTAAAAGGTCAGGCTGGCCGAATAGTGAAGGTAATCAGAAGCGCTCCGAATaGGAGGGGTCGGTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: HAFYKVIKRSGWPNSEGNQKRSE*EGSVKP
Trigger: TGGCTTCACCGACCCCTCCAATTCGGAGCGCTTCTG...ATTACCTTCACTATTCGGCCAGCCTGACCTTTTAATAACTTTGTAAAAAGCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCATCTGGGTGAGGACCTaGTCAAGCCACTGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTIWVRT*SSHCKG
Trigger: GCCTTTGCAGTGGCTTGACAAGGTCCTCACCCAGAT...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTCCTCCCCTACCATACTaGATGTCTCTAAGACACACT +
Preference number: 5 (lower is better)
Translates to: QLFITSTSGFARVFQKTGPPLPY*MSLRHT
Trigger: AGTGTGTCTTAGAGACATCAAGTATGGTAGGGGAGG...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TACAACACAGACAACATAAGGACAATGGAGACGTCTGCCAGCAGCCTTGCCCTCCTTGACAACAATGGGTaGAGTAGAGTTCCAATTTTC +
Preference number: 5 (lower is better)
Translates to: YNTDNIRTMETSASSLALLDNNG*SRVPIF
Trigger: GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAG...GAGGGCAAGGCTGCTGGCAGACGTCTCCATTGTCCTTATGTTGTCTGTGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GACGCCATTTCTTGCCCTTCAAAGTGGGGCCAAAGGGTAAATGTGTTTGGCAGAAATAGACACTATACATaGCATATGCACTGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: DAISCPSKWGQRVNVFGRNRHYT*HMHWAS
Trigger: TGAGGCCCAGTGCATATGCAATGTATAGTGTCTATT...TCTGCCAAACACATTTACCCTTTGGCCCCACTTTGAAGGGCAAGAAATGGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAGAGAGATCTGTAAATTTCAGCTaGCAGAAGTGCTGGCAGGTA +
Preference number: 5 (lower is better)
Translates to: AGRYLFNKTWKSFTSGERSVNFS*QKCWQV
Trigger: TACCTGCCAGCACTTCTGCAAGCTGAAATTTACAGA...TCTCTCTCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCTGCCCTGGTTTCCTCTaGCCCTTTTCAACTGTCCTT +
Preference number: 5 (lower is better)
Translates to: FFLDNNGLSRVPIFSTSCCPGFL*PFSTVL
Trigger: AAGGACAGTTGAAAAGGGCAAGAGGAAACCAGGGCA...GCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCCGTCTGCCAGCAGCCTaGCCCTCATGTGTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: EKDFFFLDNNGLSRVPIFRLPAA*PSCVLF
Trigger: GAAGAGCACACATGAGGGCAAGGCTGCTGGCAGACG...GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp ACCATCACCTCCCCATGGGAGATGCTTCATCATCATTTTGGATCCATGTCCTCTTACAGCTTCGCTGTGTaGAGGTTTGGTTCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: TITSPWEMLHHHFGSMSSYSFAV*RFGSGK
Trigger: TTTACCAGAACCAAACCTCAACACAGCGAAGCTGTA...AGAGGACATGGATCCAAAATGATGATGAAGCATCTCCCATGGGGAGGTGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CTTGCCAAAAGTATATACACTTCCTTCCCTTCACCTGGAATAAAGCAGGACTTCTTTACACGCGGCCACTaGTTTAGCCAGCCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: LAKSIYTSFPSPGIKQDFFTRGH*FSQPGL
Trigger: CAAACCAGGCTGGCTAAACAAGTGGCCGCGTGTAAA...GAAGTCCTGCTTTATTCCAGGTGAAGGGAAGGAAGTGTATATACTTTTGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTGCTCGTCCTTCTTCATATaGAAGGCGAACTCACACAGC +
Preference number: 5 (lower is better)
Translates to: FFLDNNGLSRVPIFSTSCSSFFI*KANSHS
Trigger: GCTGTGTGAGTTCGCCTTCAATATGAAGAAGGACGA...GCAGGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCGGGGTCTCTGGAATATaGCTCTGGGGCTCGATGCCT +
Preference number: 5 (lower is better)
Translates to: EKDFFFLDNNGLSRVPIFGVSGI*LWGSMP
Trigger: AGGCATCGAGCCCCAGAGCAATATTCCAGAGACCCC...GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CAGTCCTACAAGCAGCCTGCAGATTCTTCTCCCTACATCTCCTGTAAGGACGAAAGAATAAAGTACCAATaGAAGGTGGCAGTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: QSYKQPADSSPYISCKDERIKYQ*KVAVLS
Trigger: AGACAGAACTGCCACCTTCAATTGGTACTTTATTCT...TTCGTCCTTACAGGAGATGTAGGGAGAAGAATCTGCAGGCTGCTTGTAGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTGCATGCCATGCACACACTACAGCTTCGCTGTGTaGAGGTTTGGTTCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: QIFASSPDYLHTCMPCTHYSFAV*RFGSGK
Trigger: TTTACCAGAACCAAACCTCAACACAGCGAAGCTGTA...GTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTTACAGCTTCGCTGTGTaGAGGTTTGGTTCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: VFQKTGGCTPSVEGERFLYSFAV*RFGSGK
Trigger: TTTACCAGAACCAAACCTCAACACAGCGAAGCTGTA...AAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGTACAAGGGAACATCTTaGCCACACAAAGACAGTACA +
Preference number: 5 (lower is better)
Translates to: VHNIHLWVCSCVSENRWVYKGTS*PHKDST
Trigger: TGTACTGTCTTTGTGTGGCAAAGATGTTCCCTTGTA...CACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCGTGAGTGAAGGCTTCTaGGATAGATGGCTCCATCTC +
Preference number: 5 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSVSEGF*DRWLHL
Trigger: GAGATGGAGCCATCTATCCAAGAAGCCTTCACTCAC...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCTCGTCCTTCTTCATATaGAAGGCGAACTCACACAGC +
Preference number: 5 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSSSFFI*KANSHS
Trigger: GCTGTGTGAGTTCGCCTTCAATATGAAGAAGGACGA...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTGGGTGCAGAATAAAGTACCAATaGAAGGTGGCAGTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: FITSTSGFARVFQKTGGCRIKYQ*KVAVLS
Trigger: AGACAGAACTGCCACCTTCAATTGGTACTTTATTCT...GCACCCACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTCCCTGACTCCTCTAGGCTaGTCTCAAAATGTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: FFFLDNNGLSRVPIFSTSLTPLG*SQNVRS
Trigger: AGACCTGACATTTTGAGACAAGCCTAGAGGAGTCAG...GGAGGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCTTGAAGATCTTCAGGTaGCATCCTGGTGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTLKIFR*HPGGIL
Trigger: CAAGATCCCACCAGGATGCAACCTGAAGATCTTCAA...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCCCTCCCCTACCATACTaGATGTCTCTAAGACACACT +
Preference number: 5 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTPPLPY*MSLRHT
Trigger: AGTGTGTCTTAGAGACATCAAGTATGGTAGGGGAGG...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp TGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCCTTGACAACAATGGGTaGAGTAGAGTTCCAATTTTC +
Preference number: 5 (lower is better)
Translates to: CFRKQVGAPLQLREKDFFLDNNG*SRVPIF
Trigger: GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAG...GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACAGGTCTTGACAACAATGGGTaGAGTAGAGTTCCAATTTTC +
Preference number: 5 (lower is better)
Translates to: QLFITSTSGFARVFQKTGLDNNG*SRVPIF
Trigger: GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAG...ACCTGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GTGTTTCAGAAAACAGGTGGGTGCACCCCTTCAGTTGAGGGAGAAAGATTTCTTCTTGACAACAATGGGTaGAGTAGAGTTCCAATTTTC +
Preference number: 5 (lower is better)
Translates to: VFQKTGGCTPSVEGERFLLDNNG*SRVPIF
Trigger: GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAG...AAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACCCACCTGTTTTCTGAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CAGATCTTTGCTTCTTCCCCAGATTACTTACATACGTGCATGCCATGCACACACCTTGACAACAATGGGTaGAGTAGAGTTCCAATTTTC +
Preference number: 5 (lower is better)
Translates to: QIFASSPDYLHTCMPCTHLDNNG*SRVPIF
Trigger: GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAG...GTGTGTGCATGGCATGCACGTATGTAAGTAATCTGGGGAAGAAGCAAAGATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTGGTGCACCCCTTCAGTaGAGGGAGAAAGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIGAPLQ*REKDFF
Trigger: GAAGAAATCTTTCTCCCTCAACTGAAGGGGTGCACC...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTCCACCCATCCACCTCTGGGTTaGCTCGTGTGTTTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: DFFFLDNNGLSRVPIFSTHPPLG*LVCFRK
Trigger: TTTTCTGAAACACACGAGCAAACCCAGAGGTGGATG...GGTGGAGAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp AGAAGTGCTGGCAGGTATCTCTTCAACAAAACCTGGAAAAGCTTCACCTCAGGAGAAATCTCATCACATTaGAGCTGTATGACTTGCCAA +
Preference number: 5 (lower is better)
Translates to: RSAGRYLFNKTWKSFTSGEISSH*SCMTCQ
Trigger: TTGGCAAGTCATACAGCTCAAATGTGATGAGATTTC...TCCTGAGGTGAAGCTTTTCCAGGTTTTGTTGAAGAGATACCTGCCAGCACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp ACACAGCTGTTCATAACATCCACCTCTGGGTTTGCTCGTGTGTTTCAGAAAACACTTGACAACAATGGGTaGAGTAGAGTTCCAATTTTC +
Preference number: 5 (lower is better)
Translates to: TQLFITSTSGFARVFQKTLDNNG*SRVPIF
Trigger: GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAG...TGTTTTCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAACAGCTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTCATCCACCTCTGGGTTaGCTCGTGTGTTTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIHPPLG*LVCFRK
Trigger: TTTTCTGAAACACACGAGCAAACCCAGAGGTGGATG...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000560424.1
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp CTTGCCAAAAGTATATACACTTCCTTCCCTTCACCTGGAATAAAGCAGGACTTCAATAGACACTATACATaGCATATGCACTGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: LAKSIYTSFPSPGIKQDFNRHYT*HMHWAS
Trigger: TGAGGCCCAGTGCATATGCAATGTATAGTGTCTATT...GAAGTCCTGCTTTATTCCAGGTGAAGGGAAGGAAGTGTATATACTTTTGGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCGTGAGTGAAGGCTTCTaGGATAGATGGCTCCATCTC +
Preference number: 5 (lower is better)
Translates to: EKDFFFLDNNGLSRVPIFVSEGF*DRWLHL
Trigger: GAGATGGAGCCATCTATCCAAGAAGCCTTCACTCAC...GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp GAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTTTCTGCTGGGAGCAGTACTaGTTACACAATACAACTGCT +
Preference number: 5 (lower is better)
Translates to: EKDFFFLDNNGLSRVPIFCWEQY*LHNTTA
Trigger: AGCAGTTGTATTGTGTAACAAGTACTGCTCCCAGCA...GAAAATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS-3UTR CAA 90 bp AGGGAGAAAGATTTCTTCTTCCTTGACAACAATGGGTTGAGTAGAGTTCCAATTGAAATCTCATCACATTaGAGCTGTATGACTTGCCAA +
Preference number: 5 (lower is better)
Translates to: REKDFFFLDNNGLSRVPIEISSH*SCMTCQ
Trigger: TTGGCAAGTCATACAGCTCAAATGTGATGAGATTTC...AATTGGAACTCTACTCAACCCATTGTTGTCAAGGAAGAAGAAATCTTTCTCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327367.9
ENST00000679624.1
ENST00000681239.1
CDS GCA 72 bp GAAGAGAAGAGCGGCCGGGCGGGCGGACGGCAGCAGTaGAGGGTCGGGAAGGCCCCGAACGCGGGGCGGAGG +
Preference number: 6 (lower is better)
Translates to: EEKSGRAGGRQQ*RVGKAPNAGRR
Trigger: CCTCCGCCCCGCGTTCGGGGCCTTCCCGACCCTGCACTGCTGCCGTCCGCCCGCCCGGCCGCTCTTCTCTTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS GCA 72 bp CCCCCAGAGACGGGCTGGCCGAAAGGCTACTGGGCCTaGCGTCCCCACAGGAAGCTTGGCAGAGGGCCCAGT +
Preference number: 6 (lower is better)
Translates to: PPETGWPKGYWA*RPHRKLGRGPS
Trigger: ACTGGGCCCTCTGCCAAGCTTCCTGTGGGGACGGCAGGCCCAGTAGCCTTTCGGCCAGCCCGTCTCTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558763.1
CDS CCA 72 bp GCAGTGCCCCCAGAGACGGGCTGGCCGAAAGGCTACTaGGCCTGCCGTCCCCACAGGAAGCTTGGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: AVPPETGWPKGY*ACRPHRKLGRG
Trigger: CCCTCTGCCAAGCTTCCTGTGGGGACGGCAGGCCCAGTAGCCTTTCGGCCAGCCCGTCTCTGGGGGCACTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558763.1
CDS CCA 72 bp CCCCAGCTGAGCAACAGTGGGCCCTCAGACCCCCGCTaGGGATGCGTAGGACCCTCCATGCCCACTTCCACC +
Preference number: 6 (lower is better)
Translates to: PQLSNSGPSDPR*GCVGPSMPTST
Trigger: GGTGGAAGTGGGCATGGAGGGTCCTACGCATCCCCAGCGGGGGTCTGAGGGCCCACTGTTGCTCAGCTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559092.1
CDS CCA 72 bp GCGGCGGCCGCGAGACTCCAAGTGGCAGCAGAAGTTTaGGTTTCCGCACGGGGTAGCTGTTTGGGTGCCGCC +
Preference number: 6 (lower is better)
Translates to: AAAARLQVAAEV*VSARGSCLGAA
Trigger: GGCGGCACCCAAACAGCTACCCCGTGCGGAAACCCAAACTTCTGCTGCCACTTGGAGTCTCGCGGCCGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS CCA 72 bp GCGAACTCACACAGCTCCATGGCCCGTAGCTCGTGGTaGCTGTGCAGGTCTGGCCATCGCCACAGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: ANSHSSMARSSW*LCRSGHRHRRQ
Trigger: CTGCCGCCTGTGGCGATGGCCAGACCTGCACAGCCACCACGAGCTACGGGCCATGGAGCTGTGTGAGTTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000558739.1
ENST00000558894.5
ENST00000559092.1
ENST00000559460.5
ENST00000559937.1
ENST00000560175.5
ENST00000679624.1
ENST00000681239.1
CDS CAA 72 bp CCAACCCCCGGCCAAACTTCGCTCGCCTCGCTAGCTTaGATGCGCAGATCCCTCCGCCTCTGCGGCCTCACC +
Preference number: 6 (lower is better)
Translates to: PTPGQTSLASLA*MRRSLRLCGLT
Trigger: GGTGAGGCCGCAGAGGCGGAGGGATCTGCGCATCAAAGCTAGCGAGGCGAGCGAAGTTTGGCCGGGGGTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS CAA 90 bp AAGGAAAGTCCAACCCCCGGCCAAACTTCGCTCGCCTCGCTAGCTTaGATGCGCAGATCCCTCCGCCTCTGCGGCCTCACCGCCCCGCCA +
Preference number: 6 (lower is better)
Translates to: KESPTPGQTSLASLA*MRRSLRLCGLTAPP
Trigger: TGGCGGGGCGGTGAGGCCGCAGAGGCGGAGGGATCTGCGCATCAAAGCTAGCGAGGCGAGCGAAGTTTGGCCGGGGGTTGGACTTTCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS GCA 72 bp CTGAGCAACAGTGGGCCCTCAGACCCCCGCTGGGGATaGGTAGGACCCTCCATGCCCACTTCCACCTGCCTT +
Preference number: 6 (lower is better)
Translates to: LSNSGPSDPRWG*VGPSMPTSTCL
Trigger: AAGGCAGGTGGAAGTGGGCATGGAGGGTCCTACGCATCCCCAGCGGGGGTCTGAGGGCCCACTGTTGCTCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559092.1
CDS CCA 72 bp AAGGCGAACTCACACAGCTCCATGGCCCGTAGCTCGTaGTGGCTGTGCAGGTCTGGCCATCGCCACAGGCGG +
Preference number: 6 (lower is better)
Translates to: KANSHSSMARSS*WLCRSGHRHRR
Trigger: CCGCCTGTGGCGATGGCCAGACCTGCACAGCCACCACGAGCTACGGGCCATGGAGCTGTGTGAGTTCGCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000558739.1
ENST00000558894.5
ENST00000559092.1
ENST00000559460.5
ENST00000559937.1
ENST00000560175.5
ENST00000679624.1
ENST00000681239.1
CDS CCA 72 bp CCTCCATGCCCACTTCCACCTGCCTTCCGGGGGCTGTaGAGGCCTCCACAACCAAAGCAAGCCTCCCCAAGT +
Preference number: 6 (lower is better)
Translates to: PPCPLPPAFRGL*RPPQPKQASPS
Trigger: ACTTGGGGAGGCTTGCTTTGGTTGTGGAGGCCTCCACAGCCCCCGGAAGGCAGGTGGAAGTGGGCATGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559092.1
CDS CCA 72 bp GCAGGTCTGTGGACACAGGGTGGGCTACTGGGTCATTaGGTGTCCCAAGCCCCATGCTCCCTCGATGGGGTC +
Preference number: 6 (lower is better)
Translates to: AGLWTQGGLLGH*VSQAPCSLDGV
Trigger: GACCCCATCGAGGGAGCATGGGGCTTGGGACACCCAATGACCCAGTAGCCCACCCTGTGTCCACAGACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680689.1
CDS TCA 72 bp GCCCTAGGCAGAAGCGCTCCGAATTGGAGGGGTCGGTaGAGCCATCCACAGTCATGGATGGCTGCGAGGCGT +
Preference number: 6 (lower is better)
Translates to: ALGRSAPNWRGR*SHPQSWMAARR
Trigger: ACGCCTCGCAGCCATCCATGACTGTGGATGGCTTCACCGACCCCTCCAATTCGGAGCGCTTCTGCCTAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000558428.5
ENST00000558827.1
ENST00000558894.5
ENST00000679624.1
ENST00000680689.1
ENST00000681239.1
CDS GCA 72 bp AGGCTCTTGACCGCCTTCTCGCACCATTTCTCCTCCTaGCCGTTCTGCTCGCCCTTCTTCCAGCCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: RLLTAFSHHFSS*PFCSPFFQPSR
Trigger: CCTGCTGGGCTGGAAGAAGGGCGAGCAGAACGGGCAGGAGGAGAAATGGTGCGAGAAGGCGGTCAAGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS CCA 72 bp CAGCAGAAGTTTGGGTTTCCGCACGGGGTAGCTGTTTaGGTGCCGCCTCCGGGAAGGAAAGTCCAACCCCCG +
Preference number: 6 (lower is better)
Translates to: QQKFGFPHGVAV*VPPPGRKVQPP
Trigger: CGGGGGTTGGACTTTCCTTCCCGGAGGCGGCACCCAAACAGCTACCCCGTGCGGAAACCCAAACTTCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS CCA 72 bp ATTGGAGGGGTCGGTGAAGCCATCCACAGTCATGGATaGCTGCGAGGCGTGGAATGTCTCCCCGACGCGCTG +
Preference number: 6 (lower is better)
Translates to: IGGVGEAIHSHG*LRGVECLPDAL
Trigger: CAGCGCGTCGGGGAGACATTCCACGCCTCGCAGCCATCCATGACTGTGGATGGCTTCACCGACCCCTCCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000558428.5
ENST00000558827.1
ENST00000558894.5
ENST00000679624.1
ENST00000680689.1
ENST00000681239.1
CDS CCA 72 bp GATGGAGCACCAGAAGGCCGGCTCGCAGTAGGTAACTaGCTGCAGGTCTGTGGACACAGGGTGGGCTACTGG +
Preference number: 6 (lower is better)
Translates to: DGAPEGRLAVGN*LQVCGHRVGYW
Trigger: CCAGTAGCCCACCCTGTGTCCACAGACCTGCAGCCAGTTACCTACTGCGAGCCGGCCTTCTGGTGCTCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680689.1
CDS CAA 72 bp GCAGCAGAAGTTTGGGTTTCCGCACGGGGTAGCTGTTaGGGTGCCGCCTCCGGGAAGGAAAGTCCAACCCCC +
Preference number: 6 (lower is better)
Translates to: AAEVWVSARGSC*GAASGKESPTP
Trigger: GGGGGTTGGACTTTCCTTCCCGGAGGCGGCACCCAAACAGCTACCCCGTGCGGAAACCCAAACTTCTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS CAA 90 bp CTCCAAGTGGCAGCAGAAGTTTGGGTTTCCGCACGGGGTAGCTGTTaGGGTGCCGCCTCCGGGAAGGAAAGTCCAACCCCCGGCCAAACT +
Preference number: 6 (lower is better)
Translates to: LQVAAEVWVSARGSC*GAASGKESPTPGQT
Trigger: AGTTTGGCCGGGGGTTGGACTTTCCTTCCCGGAGGCGGCACCCAAACAGCTACCCCGTGCGGAAACCCAAACTTCTGCTGCCACTTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS GCA 72 bp GGTGGGCTACTGGGTCATTGGGTGTCCCAAGCCCCATaGTCCCTCGATGGGGTCCCATGGACACTCTGGAAA +
Preference number: 6 (lower is better)
Translates to: GGLLGHWVSQAP*SLDGVPWTLWK
Trigger: TTTCCAGAGTGTCCATGGGACCCCATCGAGGGAGCATGGGGCTTGGGACACCCAATGACCCAGTAGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680689.1
CDS CCA 72 bp GTGCCACTGACATACCTGCAAGGGGAGATGGAAGGCTaGCCCACAAGCTCCGACTCCCAGAGCAGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: VPLTYLQGEMEG*PTSSDSQSREK
Trigger: CTTCTCCCTGCTCTGGGAGTCGGAGCTTGTGGGCCAGCCTTCCATCTCCCCTTGCAGGTATGTCAGTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558763.1
CDS CCA 72 bp CTCATAAAGGCCCTGCCCCGCCTGCTTGGCCTTGACTaGATGGAAGGAGTCTTCAAGGAGGGGCTGGGCCAA +
Preference number: 6 (lower is better)
Translates to: LIKALPRLLGLD*MEGVFKEGLGQ
Trigger: TTGGCCCAGCCCCTCCTTGAAGACTCCTTCCATCCAGTCAAGGCCAAGCAGGCGGGGCAGGGCCTTTATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680689.1
CDS TCA 72 bp GTCTCCGCGGGACGCCAGGGCTACCCGCAAAGGATCTaGGAAGGTTGGACAGTGGGTCTCCTCCTTAACACT +
Preference number: 6 (lower is better)
Translates to: VSAGRQGYPQRI*EGWTVGLLLNT
Trigger: AGTGTTAAGGAGGAGACCCACTGTCCAACCTTCTCAGATCCTTTGCGGGTAGCCCTGGCGTCCCGCGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537194.6
CDS GCA 72 bp CCTCCCCATCCACCATGCTTTCCGGTGTACCAGAGCTaGGCCTTTCCACGTTTGCCTAGGGTGCAGGCAAGA +
Preference number: 6 (lower is better)
Translates to: PPHPPCFPVYQS*AFPRLPRVQAR
Trigger: TCTTGCCTGCACCCTAGGCAAACGTGGAAAGGCGCAGCTCTGGTACACCGGAAAGCATGGTGGATGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439724.7
CDS CCA 72 bp CCCGAGTGTGGGTTTCCATGCAGTTGTCCCATCCTGTaGGAATGTCGCATCCTGTGGGAACCCAGCGTGTGG +
Preference number: 6 (lower is better)
Translates to: PECGFPCSCPIL*ECRILWEPSVW
Trigger: CCACACGCTGGGTTCCCACAGGATGCGACATTCCCACAGGATGGGACAACTGCATGGAAACCCACACTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS CCA 72 bp TCTTCAGGTTGCATCCTGCAAGGGGAGATGGAAGGCTaGCCCACAAGCTCCGACTCCCAGAGCAGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: SSGCILQGEMEG*PTSSDSQSREK
Trigger: CTTCTCCCTGCTCTGGGAGTCGGAGCTTGTGGGCCAGCCTTCCATCTCCCCTTGCAGGATGCAACCTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560424.1
CDS CAA 90 bp AGCTCGTCCAGCTGCCCCGTCTTCTTGAGTTTCTTGACCAGGCTCTaGACCGCCTTCTCGCACCATTTCTCCTCCTGCCCGTTCTGCTCG +
Preference number: 6 (lower is better)
Translates to: SSSSCPVFLSFLTRL*TAFSHHFSSCPFCS
Trigger: CGAGCAGAACGGGCAGGAGGAGAAATGGTGCGAGAAGGCGGTCAAGAGCCTGGTCAAGAAACTCAAGAAGACGGGGCAGCTGGACGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS CAA 90 bp AAGGAACCCCCACCACCCGAGCGCATCTCTGGCTGTCTTTCCATCTaGAGCTGGGTCGGCCTCTCCACTAAATCCATCCACTGGCATGAC +
Preference number: 6 (lower is better)
Translates to: KEPPPPERISGCLSI*SWVGLSTKSIHWHD
Trigger: GTCATGCCAGTGGATGGATTTAGTGGAGAGGCCGACCCAGCTCAAGATGGAAAGACAGCCAGAGATGCGCTCGGGTGGTGGGGGTTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560402.1
CDS GCA 72 bp CCTGGTGAAGCGAGCGGCGGCAATAAATTACCCCAGTaGCGCGGCTCTTGCCCACATGTTGCTCTTATGGTC +
Preference number: 6 (lower is better)
Translates to: PGEASGGNKLPQ*RGSCPHVALMV
Trigger: GACCATAAGAGCAACATGTGGGCAAGAGCCGCGGCACTGGGGTAATTTATTGCCGCCGCTCGCTTCACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS GCA 72 bp CCCCTGTCCACCTCTGACTCCCGCTTGGATCATAACTaGCTTTGCTCACGCAGGACCGGATCAACTCCCAAG +
Preference number: 6 (lower is better)
Translates to: PLSTSDSRLDHN*LCSRRTGSTPK
Trigger: CTTGGGAGTTGATCCGGTCCTGCGTGAGCAAAGGCAGTTATGATCCAAGCGGGAGTCAGAGGTGGACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558428.5
ENST00000558827.1
CDS CAA 72 bp AGCTGCCCCGTCTTCTTGAGTTTCTTGACCAGGCTCTaGACCGCCTTCTCGCACCATTTCTCCTCCTGCCCG +
Preference number: 6 (lower is better)
Translates to: SCPVFLSFLTRL*TAFSHHFSSCP
Trigger: CGGGCAGGAGGAGAAATGGTGCGAGAAGGCGGTCAAGAGCCTGGTCAAGAAACTCAAGAAGACGGGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327367.9
CDS CAA 72 bp CCACCACCCGAGCGCATCTCTGGCTGTCTTTCCATCTaGAGCTGGGTCGGCCTCTCCACTAAATCCATCCAC +
Preference number: 6 (lower is better)
Translates to: PPPERISGCLSI*SWVGLSTKSIH
Trigger: GTGGATGGATTTAGTGGAGAGGCCGACCCAGCTCAAGATGGAAAGACAGCCAGAGATGCGCTCGGGTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560402.1
CDS CAA 90 bp AAACGTGGTTGCTCAACACAGGCCCGAGTGTGGGTTTCCATGCAGTaGTCCCATCCTGTGGGAATGTCGCATCCTGTGGGAACCCAGCGT +
Preference number: 6 (lower is better)
Translates to: KRGCSTQARVWVSMQ*SHPVGMSHPVGTQR
Trigger: ACGCTGGGTTCCCACAGGATGCGACATTCCCACAGGATGGGACAACTGCATGGAAACCCACACTCGGGCCTGTGTTGAGCAACCACGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS CAA 90 bp CACACTCAGTACCATGCAAAGGGAAGGCCAACCCAGTCCCTCCCCTaGAACCCATCTCCTCACTGGGAGGTGCCACTGACATACCTGCAA +
Preference number: 6 (lower is better)
Translates to: HTQYHAKGRPTQSLP*NPSPHWEVPLTYLQ
Trigger: TTGCAGGTATGTCAGTGGCACCTCCCAGTGAGGAGATGGGTTCAAGGGGAGGGACTGGGTTGGCCTTCCCTTTGCATGGTACTGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558763.1
CDS TCA 72 bp TGTTGCTCTTATGGTCAGTGCGCTTCAGCCCAGCAGTaGCCTAACCCCAGCACCAGTGAACTCAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: CCSYGQCASAQQ*PNPSTSELSSR
Trigger: CCTGCTGCTGAGTTCACTGGTGCTGGGGTTAGGTCACTGCTGGGCTGAAGCGCACTGACCATAAGAGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS TCA 72 bp CACCACCCGAGCGCATCTCTGGCTGTCTTTCCATCTTaGGCTGGGTCGGCCTCTCCACTAAATCCATCCACT +
Preference number: 6 (lower is better)
Translates to: HHPSASLAVFPS*AGSASPLNPST
Trigger: AGTGGATGGATTTAGTGGAGAGGCCGACCCAGCTCAAGATGGAAAGACAGCCAGAGATGCGCTCGGGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560402.1
CDS GCA 72 bp AGCGGCGGCAATAAATTACCCCAGTGCCGCGGCTCTTaGCCACATGTTGCTCTTATGGTCAGTGCGCTTCAG +
Preference number: 6 (lower is better)
Translates to: SGGNKLPQCRGS*PHVALMVSALQ
Trigger: CTGAAGCGCACTGACCATAAGAGCAACATGTGGGCAAGAGCCGCGGCACTGGGGTAATTTATTGCCGCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS GCA 72 bp GTGGTTGCTCAACACAGGCCCGAGTGTGGGTTTCCATaGAGTTGTCCCATCCTGTGGGAATGTCGCATCCTG +
Preference number: 6 (lower is better)
Translates to: VVAQHRPECGFP*SCPILWECRIL
Trigger: CAGGATGCGACATTCCCACAGGATGGGACAACTGCATGGAAACCCACACTCGGGCCTGTGTTGAGCAACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS CCA 72 bp CCCGAGCGCATCTCTGGCTGTCTTTCCATCTTGAGCTaGGTCGGCCTCTCCACTAAATCCATCCACTGGCAT +
Preference number: 6 (lower is better)
Translates to: PERISGCLSILS*VGLSTKSIHWH
Trigger: ATGCCAGTGGATGGATTTAGTGGAGAGGCCGACCCAGCTCAAGATGGAAAGACAGCCAGAGATGCGCTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560402.1
CDS CCA 72 bp CAACTGTCCCAGGGAACCGCTCAGTACAGCGATGACTaGAAAGGAACAAATAGCTCCCCTCCCCAGCACGCT +
Preference number: 6 (lower is better)
Translates to: QLSQGTAQYSDD*KGTNSSPPQHA
Trigger: AGCGTGCTGGGGAGGGGAGCTATTTGTTCCTTTCCAGTCATCGCTGTACTGAGCGGTTCCCTGGGACAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558739.1
CDS CAA 72 bp TGCTCAACACAGGCCCGAGTGTGGGTTTCCATGCAGTaGTCCCATCCTGTGGGAATGTCGCATCCTGTGGGA +
Preference number: 6 (lower is better)
Translates to: CSTQARVWVSMQ*SHPVGMSHPVG
Trigger: TCCCACAGGATGCGACATTCCCACAGGATGGGACAACTGCATGGAAACCCACACTCGGGCCTGTGTTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS GCA 72 bp AGACTGGACAAAAATAGCGCTGTCACTGAGGCACTCTaGGAAGACCTCCCCTCCGATGTAGTAGAGCCGCAC +
Preference number: 6 (lower is better)
Translates to: RLDKNSAVTEAL*EDLPSDVVEPH
Trigger: GTGCGGCTCTACTACATCGGAGGGGAGGTCTTCGCAGAGTGCCTCAGTGACAGCGCTATTTTTGTCCAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000537194.6
ENST00000540846.6
ENST00000679624.1
ENST00000680689.1
ENST00000681239.1
CDS CCA 72 bp GGACTCAAACGTGGTTGCTCAACACAGGCCCGAGTGTaGGTTTCCATGCAGTTGTCCCATCCTGTGGGAATG +
Preference number: 6 (lower is better)
Translates to: GLKRGCSTQARV*VSMQLSHPVGM
Trigger: CATTCCCACAGGATGGGACAACTGCATGGAAACCCACACTCGGGCCTGTGTTGAGCAACCACGTTTGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS CAA 72 bp ATAAATTACCCCAGTGCCGCGGCTCTTGCCCACATGTaGCTCTTATGGTCAGTGCGCTTCAGCCCAGCAGTG +
Preference number: 6 (lower is better)
Translates to: INYPSAAALAHM*LLWSVRFSPAV
Trigger: CACTGCTGGGCTGAAGCGCACTGACCATAAGAGCAACATGTGGGCAAGAGCCGCGGCACTGGGGTAATTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540846.6
CDS CAA 90 bp CATCCACCATGCTTTCCGGTGTACCAGAGCTGCGCCTTTCCACGTTaGCCTAGGGTGCAGGCAAGACATGTTTGTGAAGTTGGGAGGTCA +
Preference number: 6 (lower is better)
Translates to: HPPCFPVYQSCAFPR*PRVQARHVCEVGRS
Trigger: TGACCTCCCAACTTCACAAACATGTCTTGCCTGCACCCTAGGCAAACGTGGAAAGGCGCAGCTCTGGTACACCGGAAAGCATGGTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439724.7
CDS TCA 72 bp GGTAGGGATTCACGCAGACCTCGTCCTTCTTCATATTaGAGGCGAACTCACACAGCTCCATGGCCCGTAGCT +
Preference number: 6 (lower is better)
Translates to: GRDSRRPRPSSY*RRTHTAPWPVA
Trigger: AGCTACGGGCCATGGAGCTGTGTGAGTTCGCCTTCAATATGAAGAAGGACGAGGTCTGCGTGAATCCCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327367.9
ENST00000439724.7
ENST00000540846.6
ENST00000558739.1
ENST00000558894.5
ENST00000559460.5
ENST00000559937.1
ENST00000560175.5
ENST00000679624.1
ENST00000681239.1
CDS GCA 72 bp TGTACCAGAGCTGCGCCTTTCCACGTTTGCCTAGGGTaGAGGCAAGACATGTTTGTGAAGTTGGGAGGTCAC +
Preference number: 6 (lower is better)
Translates to: CTRAAPFHVCLG*RQDMFVKLGGH
Trigger: GTGACCTCCCAACTTCACAAACATGTCTTGCCTGCACCCTAGGCAAACGTGGAAAGGCGCAGCTCTGGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439724.7
CDS GCA 72 bp GCTTTCCGGTGTACCAGAGCTGCGCCTTTCCACGTTTaGCTAGGGTGCAGGCAAGACATGTTTGTGAAGTTG +
Preference number: 6 (lower is better)
Translates to: AFRCTRAAPFHV*LGCRQDMFVKL
Trigger: CAACTTCACAAACATGTCTTGCCTGCACCCTAGGCAAACGTGGAAAGGCGCAGCTCTGGTACACCGGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439724.7
CDS CCA 72 bp CCTCCACAACCAAAGCAAGCCTCCCCAAGTGTCCTGTaGACAGTTCTCTCCCAACTCCCGAAGCTTGTTTTC +
Preference number: 6 (lower is better)
Translates to: PPQPKQASPSVL*TVLSQLPKLVF
Trigger: GAAAACAAGCTTCGGGAGTTGGGAGAGAACTGTCCACAGGACACTTGGGGAGGCTTGCTTTGGTTGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559092.1
CDS CCA 72 bp CCTCAGTCTCCGATCTTGAGACTGCACCCAGCTGCCTaGGTCACGGAAGGCAAAGATGACATCATTGATCGA +
Preference number: 6 (lower is better)
Translates to: PQSPILRLHPAA*VTEGKDDIIDR
Trigger: TCGATCAATGATGTCATCTTTGCCTTCCGTGACCCAGGCAGCTGGGTGCAGTCTCAAGATCGGAGACTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559460.5
CDS GCA 72 bp TCGCCAGGGCTGCAGCTAGAGGGGGTTCCAGTTGTGTaGACAAGGAGATACTCACCCAAGTTATTATGTGCT +
Preference number: 6 (lower is better)
Translates to: SPGLQLEGVPVV*TRRYSPKLLCA
Trigger: AGCACATAATAACTTGGGTGAGTATCTCCTTGTGCACACAACTGGAACCCCCTCTAGCTGCAGCCCTGGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559937.1
CDS CAA 72 bp TGCTTTCCGGTGTACCAGAGCTGCGCCTTTCCACGTTaGCCTAGGGTGCAGGCAAGACATGTTTGTGAAGTT +
Preference number: 6 (lower is better)
Translates to: CFPVYQSCAFPR*PRVQARHVCEV
Trigger: AACTTCACAAACATGTCTTGCCTGCACCCTAGGCAAACGTGGAAAGGCGCAGCTCTGGTACACCGGAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439724.7
CDS CAA 90 bp GACTGCACCCAGCTGCCTGGGTCACGGAAGGCAAAGATGACATCATaGATCGAGCTCTTTGCAAAACAGTTCTCTACACGGGCACACTGT +
Preference number: 6 (lower is better)
Translates to: DCTQLPGSRKAKMTS*IELFAKQFSTRAHC
Trigger: ACAGTGTGCCCGTGTAGAGAACTGTTTTGCAAAGAGCTCGATCAATGATGTCATCTTTGCCTTCCGTGACCCAGGCAGCTGGGTGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559460.5
CDS CAA 90 bp CAGCCTCATTTATACAGCTCCAGGGACACATGGTGTGTGATGCATTaGCCACACACTCCACACTCAGTACCATGCAAAGGGAAGGCCAAC +
Preference number: 6 (lower is better)
Translates to: QPHLYSSRDTWCVMH*PHTPHSVPCKGKAN
Trigger: GTTGGCCTTCCCTTTGCATGGTACTGAGTGTGGAGTGTGTGGCAAATGCATCACACACCATGTGTCCCTGGAGCTGTATAAATGAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558763.1
CDS CAA 90 bp GGGACAGAGTTGATCCTCGCTCAGGACATACGCTCTGTCCACAGTTaGGGGCAAAAGTCCACATTTGTGAAGCATTTCAGAACACTGTCC +
Preference number: 6 (lower is better)
Translates to: GTELILAQDIRSVHS*GQKSTFVKHFRTLS
Trigger: GGACAGTGTTCTGAAATGCTTCACAAATGTGGACTTTTGCCCCAAACTGTGGACAGAGCGTATGTCCTGAGCGAGGATCAACTCTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559092.1
CDS TCA 72 bp CAGGGACTCAGGGTTCCAAGTGGCAGAGCTGGAATTTaGACCCAATACTTTGTTGAAGCCTCAGTCTCCGAT +
Preference number: 6 (lower is better)
Translates to: QGLRVPSGRAGI*TQYFVEASVSD
Trigger: ATCGGAGACTGAGGCTTCAACAAAGTATTGGGTTCAAATTCCAGCTCTGCCACTTGGAACCCTGAGTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559460.5
CDS CCA 72 bp CTAGACCAGCCTCATTTATACAGCTCCAGGGACACATaGTGTGTGATGCATTTGCCACACACTCCACACTCA +
Preference number: 6 (lower is better)
Translates to: LDQPHLYSSRDT*CVMHLPHTPHS
Trigger: TGAGTGTGGAGTGTGTGGCAAATGCATCACACACCATGTGTCCCTGGAGCTGTATAAATGAGGCTGGTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558763.1
CDS CAA 72 bp TTATACAGCTCCAGGGACACATGGTGTGTGATGCATTaGCCACACACTCCACACTCAGTACCATGCAAAGGG +
Preference number: 6 (lower is better)
Translates to: LYSSRDTWCVMH*PHTPHSVPCKG
Trigger: CCCTTTGCATGGTACTGAGTGTGGAGTGTGTGGCAAATGCATCACACACCATGTGTCCCTGGAGCTGTATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558763.1
CDS CAA 72 bp CAGCTGCCTGGGTCACGGAAGGCAAAGATGACATCATaGATCGAGCTCTTTGCAAAACAGTTCTCTACACGG +
Preference number: 6 (lower is better)
Translates to: QLPGSRKAKMTS*IELFAKQFSTR
Trigger: CCGTGTAGAGAACTGTTTTGCAAAGAGCTCGATCAATGATGTCATCTTTGCCTTCCGTGACCCAGGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559460.5
CDS TCA 72 bp AGCCTCATTTATACAGCTCCAGGGACACATGGTGTGTaGTGCATTTGCCACACACTCCACACTCAGTACCAT +
Preference number: 6 (lower is better)
Translates to: SLIYTAPGTHGV*CICHTLHTQYH
Trigger: ATGGTACTGAGTGTGGAGTGTGTGGCAAATGCATCACACACCATGTGTCCCTGGAGCTGTATAAATGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558763.1
CDS CAA 90 bp TCTGGGAATCAGAAGGAAGGTGGTCTGTTAAAAGGCCTTCACAGCTaGGCTCTGAGACACCTTTTGCAAAGACATCACACATGCACACCA +
Preference number: 6 (lower is better)
Translates to: SGNQKEGGLLKGLHS*ALRHLLQRHHTCTP
Trigger: TGGTGTGCATGTGTGATGTCTTTGCAAAAGGTGTCTCAGAGCCAAGCTGTGAAGGCCTTTTAACAGACCACCTTCCTTCTGATTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558428.5
CDS GCA 72 bp TATCGTATAAAACTGGCAAGAGCCACCAGAACAAGATaGTCAGGTGTCTGGAGGAGATTCCATCAGCCTTGT +
Preference number: 6 (lower is better)
Translates to: YRIKLARATRTR*SGVWRRFHQPC
Trigger: ACAAGGCTGATGGAATCTCCTCCAGACACCTGAGCATCTTGTTCTGGTGGCTCTTGCCAGTTTTATACGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680689.1
CDS CAA 72 bp CAGAAGGAAGGTGGTCTGTTAAAAGGCCTTCACAGCTaGGCTCTGAGACACCTTTTGCAAAGACATCACACA +
Preference number: 6 (lower is better)
Translates to: QKEGGLLKGLHS*ALRHLLQRHHT
Trigger: TGTGTGATGTCTTTGCAAAAGGTGTCTCAGAGCCAAGCTGTGAAGGCCTTTTAACAGACCACCTTCCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558428.5
CDS CAA 72 bp GTGTCCTGTGGACAGTTCTCTCCCAACTCCCGAAGCTaGTTTTCTTTAATTAGCTCACTGTGGCAGGAGAAA +
Preference number: 6 (lower is better)
Translates to: VSCGQFSPNSRS*FSLISSLWQEK
Trigger: TTTCTCCTGCCACAGTGAGCTAATTAAAGAAAACAAGCTTCGGGAGTTGGGAGAGAACTGTCCACAGGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559092.1
CDS CAA 72 bp TTGATCCTCGCTCAGGACATACGCTCTGTCCACAGTTaGGGGCAAAAGTCCACATTTGTGAAGCATTTCAGA +
Preference number: 6 (lower is better)
Translates to: LILAQDIRSVHS*GQKSTFVKHFR
Trigger: TCTGAAATGCTTCACAAATGTGGACTTTTGCCCCAAACTGTGGACAGAGCGTATGTCCTGAGCGAGGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559092.1