Pregenerated sensors for SLIRP (Homo sapiens)
Ensembl gene IDs: ENSG00000119705Ensembl transcript IDs: ENST00000553981.1, ENST00000554074.1, ENST00000555890.5, ENST00000556310.1, ENST00000556375.5, ENST00000556831.5, ENST00000556956.1, ENST00000557431.5, ENST00000557623.5
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCTTCCCATACCCTCCGGGCGGTGACCTGACCCGGGGCACAGAATaGCGTGGGCCAAGACTACGGCTACGCCCTCCCGCTGGCCGCCGC | + |
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Preference number: 1 (lower is better) Translates to: LFPYPPGGDLTRGTE*RGPRLRLRPPAGRR Trigger: GCGGCGGCCAGCGGGAGGGCGTAGCCGTAGTCTTGGCCCACGTCATTCTGTGCCCCGGGTCAGGTCACCGCCCGGAGGGTATGGGAAGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557431.5 |
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| 3UTR CCA 90 bp | GGGCACAGAATGACGTGGGCCAAGACTACGGCTACGCCCTCCCGCTaGCCGCCGCTACGACTAGGCCTAGTCGAAGCTGGGGTCTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: GHRMTWAKTTATPSR*PPLRLGLVEAGVFQ Trigger: CTGAAAGACCCCAGCTTCGACTAGGCCTAGTCGTAGCGGCGGCCAGCGGGAGGGCGTAGCCGTAGTCTTGGCCCACGTCATTCTGTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557431.5 |
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| 3UTR GCA 90 bp | ACGGTAGTGGCTTATTTGGGCGGAGTGAAGCGCGCGGGCTGCGACTaGGCGGCTTTCCGGCCGTTTGCCTGTGGTGGTCTCTCTCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: TVVAYLGGVKRAGCD*AAFRPFACGGLSPF Trigger: GAAAGGAGAGAGACCACCACAGGCAAACGGCCGGAAAGCCGCGCAGTCGCAGCCCGCGCGCTTCACTCCGCCCAAATAAGCCACTACCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| 3UTR GCA 90 bp | TTGGTGACGGTAGTGGCTTATTTGGGCGGAGTGAAGCGCGCGGGCTaGGACTGCGCGGCTTTCCGGCCGTTTGCCTGTGGTGGTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: LVTVVAYLGGVKRAG*DCAAFRPFACGGLS Trigger: AGAGAGACCACCACAGGCAAACGGCCGGAAAGCCGCGCAGTCGCAGCCCGCGCGCTTCACTCCGCCCAAATAAGCCACTACCGTCACCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| 3UTR TCA 90 bp | AAAGCTGCGGAGTGGTCTCAGACACTGAAGAGTGGGTTTTTCGCGTaGGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTCCGCGGC | + |
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Preference number: 1 (lower is better) Translates to: KAAEWSQTLKSGFFA*ASCGERTALPQVRG Trigger: GCCGCGGACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACTCCGCAGCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| 3UTR CCA 90 bp | CTCACCGAGGCCGAAAGCTGCGGAGTGGTCTCAGACACTGAAGAGTaGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: LTEAESCGVVSDTEE*VFRVSILRGADSAP Trigger: GGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACTCCGCAGCTTTCGGCCTCGGTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| 3UTR TCA 90 bp | ACCAGTCTTCTTCATTTCTCTTCCCATACCCTCCGGGCGGTGACCTaGCCCGGGGCACAGAATGACGTGGGCCAAGACTACGGCTACGCC | + |
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Preference number: 1 (lower is better) Translates to: TSLLHFSSHTLRAVT*PGAQNDVGQDYGYA Trigger: GGCGTAGCCGTAGTCTTGGCCCACGTCATTCTGTGCCCCGGGTCAGGTCACCGCCCGGAGGGTATGGGAAGAGAAATGAAGAAGACTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557431.5 |
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| 3UTR TCA 90 bp | GGAGTACCAGTCTTCTTCATTTCTCTTCCCATACCCTCCGGGCGGTaGCCTGACCCGGGGCACAGAATGACGTGGGCCAAGACTACGGCT | + |
|
Preference number: 1 (lower is better) Translates to: GVPVFFISLPIPSGR*PDPGHRMTWAKTTA Trigger: AGCCGTAGTCTTGGCCCACGTCATTCTGTGCCCCGGGTCAGGTCACCGCCCGGAGGGTATGGGAAGAGAAATGAAGAAGACTGGTACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557431.5 |
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| 3UTR GCA 90 bp | AGCGGTTTCCCGGGTTTAGTTCACCCGCTCACCGAGGCCGAAAGCTaGGGAGTGGTCTCAGACACTGAAGAGTGGGTTTTTCGCGTGAGC | + |
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Preference number: 1 (lower is better) Translates to: SGFPGLVHPLTEAES*GVVSDTEEWVFRVS Trigger: GCTCACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACTCCGCAGCTTTCGGCCTCGGTGAGCGGGTGAACTAAACCCGGGAAACCGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| 3UTR CCA 90 bp | TTCCGGCCGTTTGCCTGTGGTGGTCTCTCTCCTTTCGCTGTCCACTaGGTGTCCCGAAACAAGGATTCCCTAAACAAAGAGGTTGCCGAC | + |
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Preference number: 1 (lower is better) Translates to: FRPFACGGLSPFAVH*VSRNKDSLNKEVAD Trigger: GTCGGCAACCTCTTTGTTTAGGGAATCCTTGTTTCGGGACACCCAGTGGACAGCGAAAGGAGAGAGACCACCACAGGCAAACGGCCGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| 3UTR TCA 90 bp | CAACCAATCCAAGGTACAAGTTTAGGAACAGCATATTGTGTGTGTTaGTGTGAATACCTATCCTCAGGGAAACGAAAATTAACATACTTT | + |
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Preference number: 1 (lower is better) Translates to: QPIQGTSLGTAYCVC*CEYLSSGKRKLTYF Trigger: AAAGTATGTTAATTTTCGTTTCCCTGAGGATAGGTATTCACATCAACACACACAATATGCTGTTCCTAAACTTGTACCTTGGATTGGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557623.5 |
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| 3UTR-3UTR TCA 90 bp | CGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTCCGCGGCTCGGGCGAGTGGGTTTTTCGCGTaGGCATCTTGCGGGGAGCGG | + |
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Preference number: 2 (lower is better) Translates to: REHLAGSGQRSLRSAARASGFFA*ASCGER Trigger: CCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACT...CGCCCGAGCCGCGGACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCAGGTCCGCGGCTCGGGCGAACGAGATGGGGTTGGTGACGGTAGTGGCTGTGAAGCGCGCGGGCTaGGACTGCGCGGCTTTCCGG | + |
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Preference number: 2 (lower is better) Translates to: SLRSAARANEMGLVTVVAVKRAG*DCAAFR Trigger: CCGGAAAGCCGCGCAGTCGCAGCCCGCGCGCTTCAC...AGCCACTACCGTCACCAACCCCATCTCGTTCGCCCGAGCCGCGGACCTGAGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| 3UTR CAA 90 bp | GCGGCTCGGGCGAACGAGATGGGGTTGGTGACGGTAGTGGCTTATTaGGGCGGAGTGAAGCGCGCGGGCTGCGACTGCGCGGCTTTCCGG | + |
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Preference number: 2 (lower is better) Translates to: AARANEMGLVTVVAY*GGVKRAGCDCAAFR Trigger: CCGGAAAGCCGCGCAGTCGCAGCCCGCGCGCTTCACTCCGCCCAAATAAGCCACTACCGTCACCAACCCCATCTCGTTCGCCCGAGCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| 3UTR CAA 90 bp | GGACAGCGCTCCCTCAGGTCCGCGGCTCGGGCGAACGAGATGGGGTaGGTGACGGTAGTGGCTTATTTGGGCGGAGTGAAGCGCGCGGGC | + |
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Preference number: 2 (lower is better) Translates to: GQRSLRSAARANEMG*VTVVAYLGGVKRAG Trigger: GCCCGCGCGCTTCACTCCGCCCAAATAAGCCACTACCGTCACCAACCCCATCTCGTTCGCCCGAGCCGCGGACCTGAGGGAGCGCTGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| 3UTR-3UTR CCA 90 bp | CGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTCCGCGGCTCGGGCGGCCGTTTGCCTGTGGTaGTCTCTCTCCTTTCGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: REHLAGSGQRSLRSAARAAVCLW*SLSFRC Trigger: ACAGCGAAAGGAGAGAGACCACCACAGGCAAACGGC...CGCCCGAGCCGCGGACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| 3UTR CAA 90 bp | GGAGTGGTCTCAGACACTGAAGAGTGGGTTTTTCGCGTGAGCATCTaGCGGGGAGCGGACAGCGCTCCCTCAGGTCCGCGGCTCGGGCGA | + |
|
Preference number: 2 (lower is better) Translates to: GVVSDTEEWVFRVSI*RGADSAPSGPRLGR Trigger: TCGCCCGAGCCGCGGACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| 3UTR-3UTR GCA 90 bp | TTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTCCGCGGCTACCGAGGCCGAAAGCTaGGGAGTGGTCTCAGACACT | + |
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Preference number: 2 (lower is better) Translates to: FSREHLAGSGQRSLRSAATEAES*GVVSDT Trigger: AGTGTCTGAGACCACTCCGCAGCTTTCGGCCTCGGT...AGCCGCGGACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| 3UTR-3UTR TCA 90 bp | GGCTCGGGCGAACGAGATGGGGTTGGTGACGGTAGTGGCTTATTTGGGCGGAGTAGTGGGTTTTTCGCGTaGGCATCTTGCGGGGAGCGG | + |
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Preference number: 2 (lower is better) Translates to: GSGERDGVGDGSGLFGRSSGFFA*ASCGER Trigger: CCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACT...ACTCCGCCCAAATAAGCCACTACCGTCACCAACCCCATCTCGTTCGCCCGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| 3UTR-3UTR TCA 90 bp | ACAGCGCTCCCTCAGGTCCGCGGCTCGGGCGAACGAGATGGGGTTGGTGACGGTAGTGGTCTCAGACACTaGAGAGTGGGTTTTTCGCGT | + |
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Preference number: 2 (lower is better) Translates to: TALPQVRGSGERDGVGDGSGLRH*RVGFSR Trigger: ACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACT...ACCGTCACCAACCCCATCTCGTTCGCCCGAGCCGCGGACCTGAGGGAGCGCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| 3UTR-3UTR CCA 90 bp | ACGTGGGCCAAGACTACGGCTACGCCCTCCCGCTGGCCGCCGCTACGACTAGGCTCAGACACTGAAGAGTaGGTTTTTCGCGTGAGCATC | + |
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Preference number: 2 (lower is better) Translates to: TWAKTTATPSRWPPLRLGSDTEE*VFRVSI Trigger: GATGCTCACGCGAAAAACCCACTCTTCAGTGTCTGA...GCCTAGTCGTAGCGGCGGCCAGCGGGAGGGCGTAGCCGTAGTCTTGGCCCACGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557431.5 |
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| 3UTR-3UTR TCA 90 bp | TGCGGAGTGGTCTCAGACACTGAAGAGTGGGTTTTTCGCGTGAGCATCTTGCGGAGTGGGTTTTTCGCGTaGGCATCTTGCGGGGAGCGG | + |
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Preference number: 2 (lower is better) Translates to: CGVVSDTEEWVFRVSILRSGFFA*ASCGER Trigger: CCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACT...CCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACTCCGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| 3UTR-3UTR CCA 90 bp | CGGGCGAACGAGATGGGGTTGGTGACGGTAGTGGCTTATTTGGGCGGAGTGAAGCCGAAAGCTGCGGAGTaGTCTCAGACACTGAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: RANEMGLVTVVAYLGGVKPKAAE*SQTLKS Trigger: ACTCTTCAGTGTCTGAGACCACTCCGCAGCTTTCGG...CTTCACTCCGCCCAAATAAGCCACTACCGTCACCAACCCCATCTCGTTCGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCACCGACTGGTCTGATTTaGGTTGATTGGTATTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: EEWVFRVSILRGADSAPSPTGLI*VDWYFV Trigger: TACAAAATACCAATCAACTCAAATCAGACCAGTCGG...TGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| 3UTR-3UTR CCA 90 bp | TGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTCCGGATGGTATCTTGAGCTaGTTCTATAATGCTTCATTT | + |
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Preference number: 2 (lower is better) Translates to: WVFRVSILRGADSAPSGPDGILS*FYNASF Trigger: AAATGAAGCATTATAGAACCAGCTCAAGATACCATC...CGGACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGCGGTTTCCCGGGTTTAGTTCACCCGCTCACCGAGGCCGAAAGCTGCGGTATTTTGTAACTGGATaGTATCTTGAGCTGGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: FQRFPGFSSPAHRGRKLRYFVTG*YLELVL Trigger: TAGAACCAGCTCAAGATACCATCCAGTTACAAAATA...CCGCAGCTTTCGGCCTCGGTGAGCGGGTGAACTAAACCCGGGAAACCGCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| 3UTR-3UTR TCA 90 bp | GTCAACGAATCTGTTAGATGTTCTTTTGAGCTAACAGGACGTCCTAATTGTAAATTGTGTGTGTTGATGTaGATACCTATCCTCAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: VNESVRCSFELTGRPNCKLCVLM*IPILRE Trigger: TTCCCTGAGGATAGGTATTCACATCAACACACACAA...TTTACAATTAGGACGTCCTGTTAGCTCAAAAGAACATCTAACAGATTCGTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557623.5 |
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| 3UTR-3UTR GCA 90 bp | CATGTCAACGAATCTGTTAGATGTTCTTTTGAGCTAACAGGACGTCCTAATTGTATGCTTTATAAGGGCTaGCAGCTTGATTATGTATCA | + |
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Preference number: 2 (lower is better) Translates to: HVNESVRCSFELTGRPNCMLYKG*QLDYVS Trigger: TGATACATAATCAAGCTGGCAGCCCTTATAAAGCAT...ACAATTAGGACGTCCTGTTAGCTCAAAAGAACATCTAACAGATTCGTTGACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557623.5 |
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| 3UTR-3UTR CAA 90 bp | AGCGGACAGCGCTCCCTCAGGTCCGCGGCTCGGGCGAACGAGATGGGGTTGGTGTTTCGCGTGAGCATCTaGCGGGGAGCGGACAGCGCT | + |
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Preference number: 3 (lower is better) Translates to: SGQRSLRSAARANEMGLVFRVSI*RGADSA Trigger: AGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAA...CACCAACCCCATCTCGTTCGCCCGAGCCGCGGACCTGAGGGAGCGCTGTCCGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| 3UTR TCA 72 bp | TACCCTCCGGGCGGTGACCTGACCCGGGGCACAGAATaGCGTGGGCCAAGACTACGGCTACGCCCTCCCGCT | + |
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Preference number: 3 (lower is better) Translates to: YPPGGDLTRGTE*RGPRLRLRPPA Trigger: AGCGGGAGGGCGTAGCCGTAGTCTTGGCCCACGTCATTCTGTGCCCCGGGTCAGGTCACCGCCCGGAGGGTA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557431.5 |
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| 3UTR GCA 72 bp | GCTTATTTGGGCGGAGTGAAGCGCGCGGGCTGCGACTaGGCGGCTTTCCGGCCGTTTGCCTGTGGTGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: AYLGGVKRAGCD*AAFRPFACGGL Trigger: GAGACCACCACAGGCAAACGGCCGGAAAGCCGCGCAGTCGCAGCCCGCGCGCTTCACTCCGCCCAAATAAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| 3UTR CCA 72 bp | ATGACGTGGGCCAAGACTACGGCTACGCCCTCCCGCTaGCCGCCGCTACGACTAGGCCTAGTCGAAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: MTWAKTTATPSR*PPLRLGLVEAG Trigger: CCCAGCTTCGACTAGGCCTAGTCGTAGCGGCGGCCAGCGGGAGGGCGTAGCCGTAGTCTTGGCCCACGTCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557431.5 |
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| 3UTR GCA 72 bp | GTAGTGGCTTATTTGGGCGGAGTGAAGCGCGCGGGCTaGGACTGCGCGGCTTTCCGGCCGTTTGCCTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: VVAYLGGVKRAG*DCAAFRPFACG Trigger: ACCACAGGCAAACGGCCGGAAAGCCGCGCAGTCGCAGCCCGCGCGCTTCACTCCGCCCAAATAAGCCACTAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| 3UTR TCA 72 bp | GAGTGGTCTCAGACACTGAAGAGTGGGTTTTTCGCGTaGGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: EWSQTLKSGFFA*ASCGERTALPQ Trigger: CTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| 3UTR TCA 72 bp | CACCGAGGCCGAAAGCTGCGGAGTGGTCTCAGACACTaGAGAGTGGGTTTTTCGCGTGAGCATCTTGCGGGG | + |
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Preference number: 3 (lower is better) Translates to: HRGRKLRSGLRH*RVGFSREHLAG Trigger: CCCCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACTCCGCAGCTTTCGGCCTCGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| 3UTR TCA 72 bp | GTCTTCTTCATTTCTCTTCCCATACCCTCCGGGCGGTaGCCTGACCCGGGGCACAGAATGACGTGGGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: VFFISLPIPSGR*PDPGHRMTWAK Trigger: CTTGGCCCACGTCATTCTGTGCCCCGGGTCAGGTCACCGCCCGGAGGGTATGGGAAGAGAAATGAAGAAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557431.5 |
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| 3UTR CCA 72 bp | GCCGAAAGCTGCGGAGTGGTCTCAGACACTGAAGAGTaGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGAC | + |
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Preference number: 3 (lower is better) Translates to: AESCGVVSDTEE*VFRVSILRGAD Trigger: GTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACTCCGCAGCTTTCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| 3UTR GCA 72 bp | CCGGGTTTAGTTCACCCGCTCACCGAGGCCGAAAGCTaGGGAGTGGTCTCAGACACTGAAGAGTGGGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: PGLVHPLTEAES*GVVSDTEEWVF Trigger: AAAAACCCACTCTTCAGTGTCTGAGACCACTCCGCAGCTTTCGGCCTCGGTGAGCGGGTGAACTAAACCCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| 3UTR TCA 72 bp | CAAGGTACAAGTTTAGGAACAGCATATTGTGTGTGTTaGTGTGAATACCTATCCTCAGGGAAACGAAAATTA | + |
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Preference number: 3 (lower is better) Translates to: QGTSLGTAYCVC*CEYLSSGKRKL Trigger: TAATTTTCGTTTCCCTGAGGATAGGTATTCACATCAACACACACAATATGCTGTTCCTAAACTTGTACCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557623.5 |
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| CDS-3UTR TCA 90 bp | GGGAGCGGACAGCGCTCCCTCAGGTCCGCGGCTCGGGCGAACGAGATGGGGTTGCTCCGGGCGGTGACCTaGCCCGGGGCACAGAATGAC | + |
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Preference number: 4 (lower is better) Translates to: GSGQRSLRSAARANEMGLLRAVT*PGAQND Trigger: GTCATTCTGTGCCCCGGGTCAGGTCACCGCCCGGAG...CAACCCCATCTCGTTCGCCCGAGCCGCGGACCTGAGGGAGCGCTGTCCGCTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557431.5 |
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| CDS-3UTR GCA 90 bp | ACGTGGGCCAAGACTACGGCTACGCCCTCCCGCTGGCCGCCGCTACGACTAGGCCGCGCGGGCTGCGACTaGGCGGCTTTCCGGCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: TWAKTTATPSRWPPLRLGRAGCD*AAFRPF Trigger: AAACGGCCGGAAAGCCGCGCAGTCGCAGCCCGCGCG...GCCTAGTCGTAGCGGCGGCCAGCGGGAGGGCGTAGCCGTAGTCTTGGCCCACGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557431.5 |
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| CDS-3UTR GCA 90 bp | GGGGCACAGAATGACGTGGGCCAAGACTACGGCTACGCCCTCCCGCTGGCCGCCGTGAAGCGCGCGGGCTaGGACTGCGCGGCTTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: GAQNDVGQDYGYALPLAAVKRAG*DCAAFR Trigger: CCGGAAAGCCGCGCAGTCGCAGCCCGCGCGCTTCAC...GGCGGCCAGCGGGAGGGCGTAGCCGTAGTCTTGGCCCACGTCATTCTGTGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557431.5 |
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| CDS-3UTR TCA 90 bp | GGGAGCGGACAGCGCTCCCTCAGGTCCGCGGCTCGGGCGAACGAGATGGGGTTGACCCGGGGCACAGAATaGCGTGGGCCAAGACTACGG | + |
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Preference number: 4 (lower is better) Translates to: GSGQRSLRSAARANEMGLTRGTE*RGPRLR Trigger: CCGTAGTCTTGGCCCACGTCATTCTGTGCCCCGGGT...CAACCCCATCTCGTTCGCCCGAGCCGCGGACCTGAGGGAGCGCTGTCCGCTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557431.5 |
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| CDS-3UTR GCA 90 bp | GGGAGCGGACAGCGCTCCCTCAGGTCCGCGGCTCGGGCGAACGAGATGGGGTTGGGCTTTCCGGCCGTTTaGCTGTGGTGGTCTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GSGQRSLRSAARANEMGLGFPAV*LWWSLS Trigger: GGAGAGAGACCACCACAGGCAAACGGCCGGAAAGCC...CAACCCCATCTCGTTCGCCCGAGCCGCGGACCTGAGGGAGCGCTGTCCGCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| CDS-3UTR TCA 90 bp | ACAGCGCTCCCTCAGGTCCGCGGCTCGGGCGAACGAGATGGGGTTGGTGACGGTCTTATTTGGGCGGAGTaGAGCGCGCGGGCTGCGACT | + |
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Preference number: 4 (lower is better) Translates to: TALPQVRGSGERDGVGDGLIWAE*SARAAT Trigger: AGTCGCAGCCCGCGCGCTTCACTCCGCCCAAATAAG...ACCGTCACCAACCCCATCTCGTTCGCCCGAGCCGCGGACCTGAGGGAGCGCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| CDS-3UTR GCA 90 bp | GAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTCGCGCGGGCTGCGACTaGGCGGCTTTCCGGCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EWVFRVSILRGADSAPSGRAGCD*AAFRPF Trigger: AAACGGCCGGAAAGCCGCGCAGTCGCAGCCCGCGCG...ACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR TCA 90 bp | CTCCCGCTGGCCGCCGCTACGACTAGGCCTAGTCGAAGCTGGGGTCTTTCAGCGCTTATTTGGGCGGAGTaGAGCGCGCGGGCTGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: LPLAAATTRPSRSWGLSALIWAE*SARAAT Trigger: AGTCGCAGCCCGCGCGCTTCACTCCGCCCAAATAAG...CGCTGAAAGACCCCAGCTTCGACTAGGCCTAGTCGTAGCGGCGGCCAGCGGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557431.5 |
||
| CDS-3UTR GCA 90 bp | TTTCAGCGGTTTCCCGGGTTTAGTTCACCCGCTCACCGAGGCCGAAAGCTGCGGCGCGCGGGCTGCGACTaGGCGGCTTTCCGGCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FQRFPGFSSPAHRGRKLRRAGCD*AAFRPF Trigger: AAACGGCCGGAAAGCCGCGCAGTCGCAGCCCGCGCG...CCGCAGCTTTCGGCCTCGGTGAGCGGGTGAACTAAACCCGGGAAACCGCTGAAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCGTGAAGCGCGCGGGCTaGGACTGCGCGGCTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TEEWVFRVSILRGADSAPVKRAG*DCAAFR Trigger: CCGGAAAGCCGCGCAGTCGCAGCCCGCGCGCTTCAC...GGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| CDS-3UTR GCA 90 bp | GAAGAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGTGAAGCGCGCGGGCTaGGACTGCGCGGCTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EEWVFRVSILRGADSAPSVKRAG*DCAAFR Trigger: CCGGAAAGCCGCGCAGTCGCAGCCCGCGCGCTTCAC...TGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR CCA 90 bp | GGAGCGGACAGCGCTCCCTCAGGTCCGCGGCTCGGGCGAACGAGATGGGGTTGGGCCGTTTGCCTGTGGTaGTCTCTCTCCTTTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GADSAPSGPRLGRTRWGWAVCLW*SLSFRC Trigger: ACAGCGAAAGGAGAGAGACCACCACAGGCAAACGGC...CCAACCCCATCTCGTTCGCCCGAGCCGCGGACCTGAGGGAGCGCTGTCCGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| 3UTR CAA 72 bp | GCGAACGAGATGGGGTTGGTGACGGTAGTGGCTTATTaGGGCGGAGTGAAGCGCGCGGGCTGCGACTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: ANEMGLVTVVAY*GGVKRAGCDCA Trigger: CGCGCAGTCGCAGCCCGCGCGCTTCACTCCGCCCAAATAAGCCACTACCGTCACCAACCCCATCTCGTTCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556310.1 |
||
| CDS-3UTR CCA 90 bp | TTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTCCGCGGCTCCGGCCGTTTGCCTGTaGTGGTCTCTCTCCTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FSREHLAGSGQRSLRSAAPAVCL*WSLSFR Trigger: GCGAAAGGAGAGAGACCACCACAGGCAAACGGCCGG...AGCCGCGGACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR TCA 90 bp | ACAGCGCTCCCTCAGGTCCGCGGCTCGGGCGAACGAGATGGGGTTGGTGACGGTAAGCAACCGGCTGATTaGTACTTCTACGCAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TALPQVRGSGERDGVGDGKQPAD*YFYAAP Trigger: CGGCGCTGCGTAGAAGTATCAATCAGCCGGTTGCTT...ACCGTCACCAACCCCATCTCGTTCGCCCGAGCCGCGGACCTGAGGGAGCGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557431.5 |
||
| CDS-3UTR TCA 90 bp | AGTGGCGCAATCTCGGCTCACTGCAGGCTCCACCCCCTGGGGTTCACGCCATTCATGGTCTCGATCTCCTaGCCTTGTGATCCGCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SGAISAHCRLHPLGFTPFMVSIS*PCDPPA Trigger: GGCGGGCGGATCACAAGGTCAGGAGATCGAGACCAT...GAATGGCGTGAACCCCAGGGGGTGGAGCCTGCAGTGAGCCGAGATTGCGCCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556831.5 |
||
| CDS-3UTR TCA 90 bp | GGGAGCGGACAGCGCTCCCTCAGGTCCGCGGCTCGGGCGAACGAGATGGGGTTGAGTGGTCTCAGACACTaGAGAGTGGGTTTTTCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GSGQRSLRSAARANEMGLSGLRH*RVGFSR Trigger: ACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACT...CAACCCCATCTCGTTCGCCCGAGCCGCGGACCTGAGGGAGCGCTGTCCGCTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR CCA 90 bp | TGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTCCGCCGGCCGTTTGCCTGTaGTGGTCTCTCTCCTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: WVFRVSILRGADSAPSGPPAVCL*WSLSFR Trigger: GCGAAAGGAGAGAGACCACCACAGGCAAACGGCCGG...CGGACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR TCA 90 bp | GAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTAGTGGGTTTTTCGCGTaGGCATCTTGCGGGGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EWVFRVSILRGADSAPSGSGFFA*ASCGER Trigger: CCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACT...ACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR TCA 90 bp | ACGTGGGCCAAGACTACGGCTACGCCCTCCCGCTGGCCGCCGCTACGACTAGGCAGTGGTCTCAGACACTaGAGAGTGGGTTTTTCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: TWAKTTATPSRWPPLRLGSGLRH*RVGFSR Trigger: ACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACT...GCCTAGTCGTAGCGGCGGCCAGCGGGAGGGCGTAGCCGTAGTCTTGGCCCACGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557431.5 |
||
| CDS-3UTR TCA 90 bp | GTCTCAGACACTGAAGAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACATACCCTCCGGGCGGTaGCCTGACCCGGGGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSDTEEWVFRVSILRGADIPSGR*PDPGHR Trigger: TCTGTGCCCCGGGTCAGGTCACCGCCCGGAGGGTAT...GTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGTGTCTGAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000557431.5 |
||
| CDS-3UTR GCA 90 bp | GAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTGGCTTTCCGGCCGTTTaGCTGTGGTGGTCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EWVFRVSILRGADSAPSGGFPAV*LWWSLS Trigger: GGAGAGAGACCACCACAGGCAAACGGCCGGAAAGCC...ACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR CCA 90 bp | ACAGCGCTCCCTCAGGTCCGCGGCTCGGGCGAACGAGATGGGGTTGGTGACGGTCCTTTCGCTGTCCACTaGGTGTCCCGAAACAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TALPQVRGSGERDGVGDGPFAVH*VSRNKD Trigger: ATCCTTGTTTCGGGACACCCAGTGGACAGCGAAAGG...ACCGTCACCAACCCCATCTCGTTCGCCCGAGCCGCGGACCTGAGGGAGCGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR CCA 90 bp | GTGACGGTAGTGGCTTATTTGGGCGGAGTGAAGCGCGCGGGCTGCGACTGCGCGGCCGTTTGCCTGTGGTaGTCTCTCTCCTTTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTVVAYLGGVKRAGCDCAAVCLW*SLSFRC Trigger: ACAGCGAAAGGAGAGAGACCACCACAGGCAAACGGC...CGCGCAGTCGCAGCCCGCGCGCTTCACTCCGCCCAAATAAGCCACTACCGTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556310.1 |
||
| 3UTR CAA 72 bp | TCAGACACTGAAGAGTGGGTTTTTCGCGTGAGCATCTaGCGGGGAGCGGACAGCGCTCCCTCAGGTCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SDTEEWVFRVSI*RGADSAPSGPR Trigger: CCGCGGACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGTGTCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| 3UTR CAA 72 bp | TCCCTCAGGTCCGCGGCTCGGGCGAACGAGATGGGGTaGGTGACGGTAGTGGCTTATTTGGGCGGAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLRSAARANEMG*VTVVAYLGGVK Trigger: CTTCACTCCGCCCAAATAAGCCACTACCGTCACCAACCCCATCTCGTTCGCCCGAGCCGCGGACCTGAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556310.1 |
||
| CDS-3UTR TCA 90 bp | GCGCAATCTCGGCTCACTGCAGGCTCCACCCCCTGGGGTTCACGCCATTCTCCTAAGCAACCGGCTGATTaGTACTTCTACGCAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AQSRLTAGSTPWGSRHSPKQPAD*YFYAAP Trigger: CGGCGCTGCGTAGAAGTATCAATCAGCCGGTTGCTT...AGGAGAATGGCGTGAACCCCAGGGGGTGGAGCCTGCAGTGAGCCGAGATTGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556831.5 |
||
| CDS-3UTR GCA 90 bp | TTTCAGCGGTTTCCCGGGTTTAGTTCACCCGCTCACCGAGGCCGAAAGCTGCGGGGCTTTCCGGCCGTTTaGCTGTGGTGGTCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQRFPGFSSPAHRGRKLRGFPAV*LWWSLS Trigger: GGAGAGAGACCACCACAGGCAAACGGCCGGAAAGCC...CCGCAGCTTTCGGCCTCGGTGAGCGGGTGAACTAAACCCGGGAAACCGCTGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR TCA 90 bp | GACACTGAAGAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTAGTGGGTTTTTCGCGTaGGCATCTTGCGGGGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DTEEWVFRVSILRGADSASGFFA*ASCGER Trigger: CCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACT...AGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| CDS-3UTR CCA 90 bp | TGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTCCGCCTTTCGCTGTCCACTaGGTGTCCCGAAACAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WVFRVSILRGADSAPSGPPFAVH*VSRNKD Trigger: ATCCTTGTTTCGGGACACCCAGTGGACAGCGAAAGG...CGGACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| CDS-3UTR TCA 90 bp | GGAGTGGTCTCAGACACTGAAGAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGACTTATTTGGGCGGAGTaGAGCGCGCGGGCTGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: GVVSDTEEWVFRVSILRGLIWAE*SARAAT Trigger: AGTCGCAGCCCGCGCGCTTCACTCCGCCCAAATAAG...TCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| CDS-3UTR TCA 90 bp | GGAGCGGACAGCGCTCCCTCAGGTCCGCGGCTCGGGCGAACGAGATGGGGTTGGAACTGGATGGTATCTTaGGCTGGTTCTATAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GADSAPSGPRLGRTRWGWNWMVS*AGSIML Trigger: AAGCATTATAGAACCAGCTCAAGATACCATCCAGTT...CCAACCCCATCTCGTTCGCCCGAGCCGCGGACCTGAGGGAGCGCTGTCCGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| CDS-3UTR CCA 90 bp | ACTGAAGAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCGCCGTTTGCCTGTGGTaGTCTCTCTCCTTTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TEEWVFRVSILRGADSAPAVCLW*SLSFRC Trigger: ACAGCGAAAGGAGAGAGACCACCACAGGCAAACGGC...GGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR GCA 90 bp | GCGCAATCTCGGCTCACTGCAGGCTCCACCCCCTGGGGTTCACGCCATTCTCCTGACATGGCCGAACTGTaGAAAGTGTTCTTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AQSRLTAGSTPWGSRHSPDMAEL*KVFFQL Trigger: CAGCTGAAAGAACACTTTGCACAGTTCGGCCATGTC...AGGAGAATGGCGTGAACCCCAGGGGGTGGAGCCTGCAGTGAGCCGAGATTGCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556831.5 |
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| CDS-3UTR CCA 90 bp | CGCAATCTCGGCTCACTGCAGGCTCCACCCCCTGGGGTTCACGCCATTCTCCTGATGCACCTTCTGACATaGCCGAACTGTGCAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RNLGSLQAPPPGVHAILLMHLLT*PNCAKC Trigger: ACACTTTGCACAGTTCGGCCATGTCAGAAGGTGCAT...CAGGAGAATGGCGTGAACCCCAGGGGGTGGAGCCTGCAGTGAGCCGAGATTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556831.5 |
||
| CDS-3UTR CCA 90 bp | CTGGGGTCTTTCAGCGGTTTCCCGGGTTTAGTTCACCCGCTCACCGAGGCCGAACCTTTCGCTGTCCACTaGGTGTCCCGAAACAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LGSFSGFPGLVHPLTEAEPFAVH*VSRNKD Trigger: ATCCTTGTTTCGGGACACCCAGTGGACAGCGAAAGG...TTCGGCCTCGGTGAGCGGGTGAACTAAACCCGGGAAACCGCTGAAAGACCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR TCA 90 bp | GAAGAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAAGTGGTCTCAGACACTaGAGAGTGGGTTTTTCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: EEWVFRVSILRGADSAPSSGLRH*RVGFSR Trigger: ACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACT...TGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR GCA 90 bp | GAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTGACATGGCCGAACTGTaGAAAGTGTTCTTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EWVFRVSILRGADSAPSGDMAEL*KVFFQL Trigger: CAGCTGAAAGAACACTTTGCACAGTTCGGCCATGTC...ACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR CCA 90 bp | TTGGTGACGGTAGTGGCTTATTTGGGCGGAGTGAAGCGCGCGGGCTGCGACTGCATGCACCTTCTGACATaGCCGAACTGTGCAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVTVVAYLGGVKRAGCDCMHLLT*PNCAKC Trigger: ACACTTTGCACAGTTCGGCCATGTCAGAAGGTGCAT...GCAGTCGCAGCCCGCGCGCTTCACTCCGCCCAAATAAGCCACTACCGTCACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556310.1 |
||
| CDS-3UTR CCA 90 bp | GAAAGCTGCGGAGTGGTCTCAGACACTGAAGAGTGGGTTTTTCGCGTGAGCATCCCGGCCGTTTGCCTGTaGTGGTCTCTCTCCTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ESCGVVSDTEEWVFRVSIPAVCL*WSLSFR Trigger: GCGAAAGGAGAGAGACCACCACAGGCAAACGGCCGG...GATGCTCACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACTCCGCAGCTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR CCA 90 bp | CTTGCGGGGAGCGGACAGCGCTCCCTCAGGTCCGCGGCTCGGGCGAACGAGATGGATGGTATCTTGAGCTaGTTCTATAATGCTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LAGSGQRSLRSAARANEMDGILS*FYNASF Trigger: AAATGAAGCATTATAGAACCAGCTCAAGATACCATC...CATCTCGTTCGCCCGAGCCGCGGACCTGAGGGAGCGCTGTCCGCTCCCCGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556310.1 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCATGCACCTTCTGACATaGCCGAACTGTGCAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TEEWVFRVSILRGADSAPMHLLT*PNCAKC Trigger: ACACTTTGCACAGTTCGGCCATGTCAGAAGGTGCAT...GGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR TCA 90 bp | GGCTCGGGCGAACGAGATGGGGTTGGTGACGGTAGTGGCTTATTTGGGCGGAGTGGTTGCCGACTGGTCTaGTTTGAGTTGATTGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: GSGERDGVGDGSGLFGRSGCRLV*FELIGI Trigger: AATACCAATCAACTCAAATCAGACCAGTCGGCAACC...ACTCCGCCCAAATAAGCCACTACCGTCACCAACCCCATCTCGTTCGCCCGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556310.1 |
||
| CDS-3UTR CCA 90 bp | GTCTCAGACACTGAAGAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACATGCACCTTCTGACATaGCCGAACTGTGCAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSDTEEWVFRVSILRGADMHLLT*PNCAKC Trigger: ACACTTTGCACAGTTCGGCCATGTCAGAAGGTGCAT...GTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGTGTCTGAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR TCA 90 bp | GCTCGGGCGAACGAGATGGGGTTGGTGACGGTAGTGGCTTATTTGGGCGGAGTGCCGACTGGTCTGATTTaGGTTGATTGGTATTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ARANEMGLVTVVAYLGGVPTGLI*VDWYFV Trigger: TACAAAATACCAATCAACTCAAATCAGACCAGTCGG...CACTCCGCCCAAATAAGCCACTACCGTCACCAACCCCATCTCGTTCGCCCGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556310.1 |
||
| CDS-3UTR GCA 90 bp | GGAGTGGTCTCAGACACTGAAGAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGACATGGCCGAACTGTaGAAAGTGTTCTTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVVSDTEEWVFRVSILRGDMAEL*KVFFQL Trigger: CAGCTGAAAGAACACTTTGCACAGTTCGGCCATGTC...TCCCCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR CCA 90 bp | TGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTCCGTATTTTGTAACTGGATaGTATCTTGAGCTGGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: WVFRVSILRGADSAPSGPYFVTG*YLELVL Trigger: TAGAACCAGCTCAAGATACCATCCAGTTACAAAATA...CGGACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000556310.1 |
||
| CDS-3UTR TCA 90 bp | TGGACAGAGAAGTTGTTGAGTTGGCTGCAGTCTCCATCCTCAGCAAATATCGAGAAGCAACCGGCTGATTaGTACTTCTACGCAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WTEKLLSWLQSPSSANIEKQPAD*YFYAAP Trigger: CGGCGCTGCGTAGAAGTATCAATCAGCCGGTTGCTT...CTCGATATTTGCTGAGGATGGAGACTGCAGCCAACTCAACAACTTCTCTGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555890.5 |
||
| CDS-3UTR GCA 90 bp | GAAAGCTGCGGAGTGGTCTCAGACACTGAAGAGTGGGTTTTTCGCGTGAGCATCGACATGGCCGAACTGTaGAAAGTGTTCTTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESCGVVSDTEEWVFRVSIDMAEL*KVFFQL Trigger: CAGCTGAAAGAACACTTTGCACAGTTCGGCCATGTC...GATGCTCACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACTCCGCAGCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
||
| CDS-3UTR TCA 90 bp | GGTGAGATGGACAGAGAAGTTGTTGAGTTGGCTGCAGTCTCCATCCTCAGCAAAGACCAGACTTGGTGGTaGGATGGACAGAGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GEMDREVVELAAVSILSKDQTWW*DGQRSC Trigger: ACAACTTCTCTGTCCATCTCACCACCAAGTCTGGTC...TTTGCTGAGGATGGAGACTGCAGCCAACTCAACAACTTCTCTGTCCATCTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555890.5 |
||
| 3UTR CAA 72 bp | AGACTTGGTGGTGAGATGGACAGAGAAGTTGTTGAGTaGGCTGCAGTCTCCATCCTCAGCAAATATCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLGGEMDREVVE*AAVSILSKYRV Trigger: CACTCGATATTTGCTGAGGATGGAGACTGCAGCCAACTCAACAACTTCTCTGTCCATCTCACCACCAAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555890.5 |
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| CDS-3UTR TCA 90 bp | GTGAGATGGACAGAGAAGTTGTTGAGTTGGCTGCAGTCTCCATCCTCAGCAAATTTTGGCCTTCTAGTGTaGACCTGGACCTTTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRWTEKLLSWLQSPSSANFGLLV*TWTFTP Trigger: TGGAGTAAAGGTCCAGGTTCACACTAGAAGGCCAAA...ATTTGCTGAGGATGGAGACTGCAGCCAACTCAACAACTTCTCTGTCCATCTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555890.5 |
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| CDS-3UTR TCA 90 bp | TGGACAGAGAAGTTGTTGAGTTGGCTGCAGTCTCCATCCTCAGCAAATATCGAGAAGTGTTCTTTCAGCTaGCCAGACTTGGTGGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WTEKLLSWLQSPSSANIEKCSFS*PDLVVR Trigger: TCTCACCACCAAGTCTGGTCAGCTGAAAGAACACTT...CTCGATATTTGCTGAGGATGGAGACTGCAGCCAACTCAACAACTTCTCTGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555890.5 |
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| CDS-3UTR GCA 90 bp | TGGACAGAGAAGTTGTTGAGTTGGCTGCAGTCTCCATCCTCAGCAAATATCGAGGACATGGCCGAACTGTaGAAAGTGTTCTTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WTEKLLSWLQSPSSANIEDMAEL*KVFFQL Trigger: CAGCTGAAAGAACACTTTGCACAGTTCGGCCATGTC...CTCGATATTTGCTGAGGATGGAGACTGCAGCCAACTCAACAACTTCTCTGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555890.5 |
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| CDS-3UTR CCA 90 bp | GTGAGATGGACAGAGAAGTTGTTGAGTTGGCTGCAGTCTCCATCCTCAGCAAATATGCACCTTCTGACATaGCCGAACTGTGCAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VRWTEKLLSWLQSPSSANMHLLT*PNCAKC Trigger: ACACTTTGCACAGTTCGGCCATGTCAGAAGGTGCAT...ATTTGCTGAGGATGGAGACTGCAGCCAACTCAACAACTTCTCTGTCCATCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555890.5 |
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| CDS-3UTR CCA 90 bp | GTGAGATGGACAGAGAAGTTGTTGAGTTGGCTGCAGTCTCCATCCTCAGCAAATAGTTACTGTGCTATGTaGACTATGATCCTCGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRWTEKLLSWLQSPSSANSYCAM*TMILDA Trigger: GGCGTCGAGGATCATAGTCCACATAGCACAGTAACT...ATTTGCTGAGGATGGAGACTGCAGCCAACTCAACAACTTCTCTGTCCATCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555890.5 |
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| CDS-3UTR CCA 90 bp | TGGACAGAGAAGTTGTTGAGTTGGCTGCAGTCTCCATCCTCAGCAAATATCGAGGAGAAGTTGTTGAGTTaGCTGCAGTCTCCATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WTEKLLSWLQSPSSANIEEKLLS*LQSPSS Trigger: TGAGGATGGAGACTGCAGCCAACTCAACAACTTCTC...CTCGATATTTGCTGAGGATGGAGACTGCAGCCAACTCAACAACTTCTCTGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555890.5 |
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| CDS-3UTR TCA 90 bp | GAGAAGTTGTTGAGTTGGCTGCAGTCTCCATCCTCAGCAAATATCGAGTGTTTTGGACAGAGAAGTTGTTaGGTTGGCTGCAGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EKLLSWLQSPSSANIECFGQRSC*VGCSLH Trigger: ATGGAGACTGCAGCCAACTCAACAACTTCTCTGTCC...AAAACACTCGATATTTGCTGAGGATGGAGACTGCAGCCAACTCAACAACTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555890.5 |
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| CDS-3UTR CCA 90 bp | TGGACAGAGAAGTTGTTGAGTTGGCTGCAGTCTCCATCCTCAGCAAATATCGAGTGTTTGCGGAAGTTTTaGCCTTCTAGTGTGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: WTEKLLSWLQSPSSANIECLRKF*PSSVNL Trigger: CAGGTTCACACTAGAAGGCCAAAACTTCCGCAAACA...CTCGATATTTGCTGAGGATGGAGACTGCAGCCAACTCAACAACTTCTCTGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555890.5 |
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| CDS-3UTR CCA 90 bp | TGGACAGAGAAGTTGTTGAGTTGGCTGCAGTCTCCATCCTCAGCAAATATCGAGGACTTGGTGGTGAGATaGACAGAGAAGTTGTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WTEKLLSWLQSPSSANIEDLVVR*TEKLLS Trigger: ACTCAACAACTTCTCTGTCCATCTCACCACCAAGTC...CTCGATATTTGCTGAGGATGGAGACTGCAGCCAACTCAACAACTTCTCTGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555890.5 |
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| CDS-3UTR TCA 90 bp | CATGTCAACGAATCTGTTAGATGTTCTTTTGAGCTAACAGGACGTCCTAATTGTAAGCAACCGGCTGATTaGTACTTCTACGCAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HVNESVRCSFELTGRPNCKQPAD*YFYAAP Trigger: CGGCGCTGCGTAGAAGTATCAATCAGCCGGTTGCTT...ACAATTAGGACGTCCTGTTAGCTCAAAAGAACATCTAACAGATTCGTTGACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557623.5 |
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| CDS-3UTR TCA 90 bp | GAGAAGTTGTTGAGTTGGCTGCAGTCTCCATCCTCAGCAAATATCGAGTGTTTTGTAAAATGCACCTTCTaGCATGGCCGAACTGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EKLLSWLQSPSSANIECFVKCTF*HGRTVQ Trigger: TTGCACAGTTCGGCCATGTCAGAAGGTGCATTTTAC...AAAACACTCGATATTTGCTGAGGATGGAGACTGCAGCCAACTCAACAACTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555890.5 |
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| CDS-3UTR TCA 90 bp | CATGTCAACGAATCTGTTAGATGTTCTTTTGAGCTAACAGGACGTCCTAATTGTTTGTGTGTGTTGATGTaGATACCTATCCTCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HVNESVRCSFELTGRPNCLCVLM*IPILRE Trigger: TTCCCTGAGGATAGGTATTCACATCAACACACACAA...ACAATTAGGACGTCCTGTTAGCTCAAAAGAACATCTAACAGATTCGTTGACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557623.5 |
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| 3UTR CAA 72 bp | CCCTCTAATCTGAAATGCTTTATAAGGGCTGCCAGCTaGATTATGTATCATCAAGGAATATATGTTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSNLKCFIRAAS*IMYHQGIYVHK Trigger: CTTGTGAACATATATTCCTTGATGATACATAATCAAGCTGGCAGCCCTTATAAAGCATTTCAGATTAGAGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557623.5 |
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| CDS-3UTR TCA 90 bp | GAAATGCTTTATAAGGGCTGCCAGCTTGATTATGTATCATCAAGGAATATATGTGCATATTGTGTGTGTTaGTGTGAATACCTATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EMLYKGCQLDYVSSRNICAYCVC*CEYLSS Trigger: TGAGGATAGGTATTCACATCAACACACACAATATGC...ACATATATTCCTTGATGATACATAATCAAGCTGGCAGCCCTTATAAAGCATTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557623.5 |
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| CDS-3UTR GCA 90 bp | ATAAGGGCTGCCAGCTTGATTATGTATCATCAAGGAATATATGTTCACAAGATGATGCTTTATAAGGGCTaGCAGCTTGATTATGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: IRAASLIMYHQGIYVHKMMLYKG*QLDYVS Trigger: TGATACATAATCAAGCTGGCAGCCCTTATAAAGCAT...CATCTTGTGAACATATATTCCTTGATGATACATAATCAAGCTGGCAGCCCTTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557623.5 |
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| CDS-3UTR CAA 90 bp | TGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTCCGCGGCTTTCCGGCCGTTaGCCTGTGGTGGTCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WVFRVSILRGADSAPSGPRLSGR*PVVVSL Trigger: GAGAGAGACCACCACAGGCAAACGGCCGGAAAGCCG...CGGACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| CDS-3UTR CAA 90 bp | GTAGTGGCTTATTTGGGCGGAGTGAAGCGCGCGGGCTGCGACTGCGCGGCTTTCACGGTAGTGGCTTATTaGGGCGGAGTGAAGCGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: VVAYLGGVKRAGCDCAAFTVVAY*GGVKRA Trigger: CGCGCGCTTCACTCCGCCCAAATAAGCCACTACCGT...GAAAGCCGCGCAGTCGCAGCCCGCGCGCTTCACTCCGCCCAAATAAGCCACTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| CDS-3UTR CAA 90 bp | GAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTTTTCGCGTGAGCATCTaGCGGGGAGCGGACAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: EWVFRVSILRGADSAPSGFRVSI*RGADSA Trigger: AGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAA...ACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTTTCGCGTGAGCATCTaGCGGGGAGCGGACAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RVGFSREHLAGSGQRSLRFRVSI*RGADSA Trigger: AGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAA...CCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| CDS-3UTR CAA 90 bp | GCTCGGGCGAACGAGATGGGGTTGGTGACGGTAGTGGCTTATTTGGGCGGAGTGCGGCTTTCCGGCCGTTaGCCTGTGGTGGTCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ARANEMGLVTVVAYLGGVRLSGR*PVVVSL Trigger: GAGAGAGACCACCACAGGCAAACGGCCGGAAAGCCG...CACTCCGCCCAAATAAGCCACTACCGTCACCAACCCCATCTCGTTCGCCCGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556310.1 |
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| CDS-3UTR CAA 90 bp | CTGGGGTCTTTCAGCGGTTTCCCGGGTTTAGTTCACCCGCTCACCGAGGCCGAACGGCTTTCCGGCCGTTaGCCTGTGGTGGTCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGSFSGFPGLVHPLTEAERLSGR*PVVVSL Trigger: GAGAGAGACCACCACAGGCAAACGGCCGGAAAGCCG...TTCGGCCTCGGTGAGCGGGTGAACTAAACCCGGGAAACCGCTGAAAGACCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| CDS-3UTR CAA 90 bp | CCGAGGCCGAAAGCTGCGGAGTGGTCTCAGACACTGAAGAGTGGGTTTTTCGCGTTTCGCGTGAGCATCTaGCGGGGAGCGGACAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PRPKAAEWSQTLKSGFFAFRVSI*RGADSA Trigger: AGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAA...CGCGAAAAACCCACTCTTCAGTGTCTGAGACCACTCCGCAGCTTTCGGCCTCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| CDS-3UTR CAA 90 bp | GAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGTGCGAACGAGATGGGGTaGGTGACGGTAGTGGCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: EWVFRVSILRGADSAPSGANEMG*VTVVAY Trigger: ATAAGCCACTACCGTCACCAACCCCATCTCGTTCGC...ACCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGTTTTTCGCGTGAGCATCTTGCGGGGAGCGGACAGCGCTCCCTCAGGGCGAACGAGATGGGGTaGGTGACGGTAGTGGCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: RVGFSREHLAGSGQRSLRANEMG*VTVVAY Trigger: ATAAGCCACTACCGTCACCAACCCCATCTCGTTCGC...CCTGAGGGAGCGCTGTCCGCTCCCCGCAAGATGCTCACGCGAAAAACCCACTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| CDS-3UTR CAA 90 bp | TGCGGAGTGGTCTCAGACACTGAAGAGTGGGTTTTTCGCGTGAGCATCTTGCGGGCGAACGAGATGGGGTaGGTGACGGTAGTGGCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: CGVVSDTEEWVFRVSILRANEMG*VTVVAY Trigger: ATAAGCCACTACCGTCACCAACCCCATCTCGTTCGC...CCGCAAGATGCTCACGCGAAAAACCCACTCTTCAGTGTCTGAGACCACTCCGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000556310.1 ENST00000556375.5 ENST00000557431.5 |
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| CDS CCA 90 bp | TTCCGGCCGTTTGCCTGTGGTGGTCTCTCTCCTTTCGCTGTCCACTaGGTGTCCCGAAACAAGGATTCAAAAGGTAAAATGCACCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FRPFACGGLSPFAVH*VSRNKDSKGKMHLL Trigger: CAGAAGGTGCATTTTACCTTTTGAATCCTTGTTTCGGGACACCCAGTGGACAGCGAAAGGAGAGAGACCACCACAGGCAAACGGCCGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556375.5 |
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| CDS-3UTR CAA 90 bp | GGTGAGATGGACAGAGAAGTTGTTGAGTTGGCTGCAGTCTCCATCCTCAGCAAATGGACAGAGAAGTTGTaGAGTTGGCTGCAGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GEMDREVVELAAVSILSKWTEKL*SWLQSP Trigger: TGGAGACTGCAGCCAACTCAACAACTTCTCTGTCCA...TTTGCTGAGGATGGAGACTGCAGCCAACTCAACAACTTCTCTGTCCATCTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555890.5 |
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| CDS-3UTR CAA 90 bp | TGGACAGAGAAGTTGTTGAGTTGGCTGCAGTCTCCATCCTCAGCAAATATCGAGAGAGAAGTTGTTGAGTaGGCTGCAGTCTCCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WTEKLLSWLQSPSSANIEREVVE*AAVSIL Trigger: GAGGATGGAGACTGCAGCCAACTCAACAACTTCTCT...CTCGATATTTGCTGAGGATGGAGACTGCAGCCAACTCAACAACTTCTCTGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555890.5 |
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| CDS-3UTR CAA 90 bp | TGGACAGAGAAGTTGTTGAGTTGGCTGCAGTCTCCATCCTCAGCAAATATCGAGAGATGGACAGAGAAGTaGTTGAGTTGGCTGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WTEKLLSWLQSPSSANIERWTEK*LSWLQS Trigger: AGACTGCAGCCAACTCAACAACTTCTCTGTCCATCT...CTCGATATTTGCTGAGGATGGAGACTGCAGCCAACTCAACAACTTCTCTGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555890.5 |
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| CDS-3UTR CAA 90 bp | AAGGGCTGCCAGCTTGATTATGTATCATCAAGGAATATATGTTCACAAGATGTGATAAGGGCTGCCAGCTaGATTATGTATCATCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KGCQLDYVSSRNICSQDVIRAAS*IMYHQG Trigger: TCCTTGATGATACATAATCAAGCTGGCAGCCCTTAT...CACATCTTGTGAACATATATTCCTTGATGATACATAATCAAGCTGGCAGCCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557623.5 |
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| CDS CCA 90 bp | TTCTCTATCTTAGACTGTAGAAAGACAGGGTCACCAGATTTCTTGTaGACAGGAACTACTTTGCATTTCCTTAAAGGCTTAAGATTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSILDCRKTGSPDFL*TGTTLHFLKGLRFR Trigger: CCTAAATCTTAAGCCTTTAAGGAAATGCAAAGTAGTTCCTGTCCACAAGAAATCTGGTGACCCTGTCTTTCTACAGTCTAAGATAGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556956.1 |
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| CDS TCA 72 bp | CTCAACATTTTGGGAGGCCGAGGTGTGCGGATAGCTTaGGCCCAGGAGTTCGACGAGACCAGCATAAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LNILGGRGVRIA*AQEFDETSISN Trigger: GTTGCTTATGCTGGTCTCGTCGAACTCCTGGGCTCAAGCTATCCGCACACCTCGGCCTCCCAAAATGTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554074.1 |
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| CDS GCA 72 bp | AGCCAGTCTCCTTGTCCTTCTGACATGGCCGAACTGTaGAAAGTGTTCTTTCAGCTGACTCGACGCCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SQSPCPSDMAEL*KVFFQLTRRRS Trigger: ACTGCGGCGTCGAGTCAGCTGAAAGAACACTTTGCACAGTTCGGCCATGTCAGAAGGACAAGGAGACTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553981.1 |
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| CDS CAA 72 bp | ACAGGGTCACCAGATTTCTTGTGGACAGGAACTACTTaGCATTTCCTTAAAGGCTTAAGATTTAGGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TGSPDFLWTGTT*HFLKGLRFRKQ Trigger: CTGCTTCCTAAATCTTAAGCCTTTAAGGAAATGCAAAGTAGTTCCTGTCCACAAGAAATCTGGTGACCCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556956.1 |
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| CDS CAA 72 bp | ATCTTAGACTGTAGAAAGACAGGGTCACCAGATTTCTaGTGGACAGGAACTACTTTGCATTTCCTTAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ILDCRKTGSPDF*WTGTTLHFLKG Trigger: GCCTTTAAGGAAATGCAAAGTAGTTCCTGTCCACAAGAAATCTGGTGACCCTGTCTTTCTACAGTCTAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556956.1 |
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| CDS CAA 90 bp | TGTAGAAAGACAGGGTCACCAGATTTCTTGTGGACAGGAACTACTTaGCATTTCCTTAAAGGCTTAAGATTTAGGAAGCAGCTATGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: CRKTGSPDFLWTGTT*HFLKGLRFRKQLWY Trigger: GTACCATAGCTGCTTCCTAAATCTTAAGCCTTTAAGGAAATGCAAAGTAGTTCCTGTCCACAAGAAATCTGGTGACCCTGTCTTTCTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556956.1 |
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| CDS CAA 90 bp | GGATTCTCTATCTTAGACTGTAGAAAGACAGGGTCACCAGATTTCTaGTGGACAGGAACTACTTTGCATTTCCTTAAAGGCTTAAGATTT | + |
|
Preference number: 6 (lower is better) Translates to: GFSILDCRKTGSPDF*WTGTTLHFLKGLRF Trigger: AAATCTTAAGCCTTTAAGGAAATGCAAAGTAGTTCCTGTCCACAAGAAATCTGGTGACCCTGTCTTTCTACAGTCTAAGATAGAGAATCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556956.1 |
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