RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLFNL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000171790

Ensembl transcript IDs: ENST00000302946.12, ENST00000359345.5, ENST00000372611.5, ENST00000372613.6, ENST00000439569.2

Found 699 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCATGGGCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTaGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAG +
Preference number: 1 (lower is better)
Translates to: RMGFTGWPYTQTGNP*VSGGECRAVLPAPQ
Trigger: CTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCATGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR TCA 90 bp GGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTaGAGCCACATGGGTGCCTGCTCATGTGCCATGTTGAAGGAGTCC +
Preference number: 1 (lower is better)
Translates to: GLRAVSWLHRWVCQG*SHMGACSCAMLKES
Trigger: GGACTCCTTCAACATGGCACATGAGCAGGCACCCATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR GCA 90 bp TTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATGGGTaGCTGCTCATGTGCCATGTTGAAGGAGTCCCTGTCCGCCTCTCA +
Preference number: 1 (lower is better)
Translates to: FLATQMGLSGLKPHG*LLMCHVEGVPVRLS
Trigger: TGAGAGGCGGACAGGGACTCCTTCAACATGGCACATGAGCAGGCACCCATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR GCA 90 bp TGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTaGAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCC +
Preference number: 1 (lower is better)
Translates to: WSFDSHKFQQVRGGG*RVASCPVTTVIKYA
Trigger: GGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR CCA 90 bp TTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGCTCTaGGCAGGGTTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGG +
Preference number: 1 (lower is better)
Translates to: LGRRTIPYSLALGEL*AGFYTFFLKVRSFG
Trigger: CCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAACCCTGCCCAGAGCTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCCCTGGGTCTCAGGTaGAGAGTGCCGTGCCGTCCT +
Preference number: 2 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVASLGLR*RVPCRP
Trigger: AGGACGGCACGGCACTCTCCACCTGAGACCCAGGGA...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTTCCCTGGGTCTCAGGTaGAGAGTGCCGTGCCGTCCT +
Preference number: 2 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASSLGLR*RVPCRP
Trigger: AGGACGGCACGGCACTCTCCACCTGAGACCCAGGGA...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR GCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGGTCTCAGGTGGAGAGTaGCGTGCCGTCCTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGVSGGE*RAVLPA
Trigger: AGCAGGCAGGACGGCACGGCACTCTCCACCTGAGAC...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR TCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTGCTCATGTGCCATGTTaGAGGAGTCCCTGTCCGCCT +
Preference number: 2 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASAHVPC*RSPCPP
Trigger: AGGCGGACAGGGACTCCTTCAACATGGCACATGAGC...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR TCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGGTCTGTCAGGGTTaGAGCCACATGGGTGCCTGC +
Preference number: 2 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGWVCQG*SHMGAC
Trigger: GCAGGCACCCATGTGGCTTCAACCCTGACAGACCCA...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR GCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGAGGTGGAGAGTGCCGTaGCGTCCTGCCTGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: RVASCPVTTVIKYASPSLRWRVP*RPACSP
Trigger: TGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCT...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR GCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTGGGTGCCTGCTCATGTaGCATGTTGAAGGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASGCLLM*HVEGVP
Trigger: AGGGACTCCTTCAACATGGCACATGAGCAGGCACCC...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTAGGGTTGAAGCCACATaGGTGCCTGCTCATGTGCCA +
Preference number: 2 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASRVEAT*VPAHVP
Trigger: TGGCACATGAGCAGGCACCCATGTGGCTTCAACCCT...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR TCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTGCTCATGTGCCATGTTaGAGGAGTCCCTGTCCGCCT +
Preference number: 2 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGAHVPC*RSPCPP
Trigger: AGGCGGACAGGGACTCCTTCAACATGGCACATGAGC...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR GCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCAAGGTGGAGAGTGCCGTaGCGTCCTGCCTGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: GFPEMTDSFLALCSQLESRWRVP*RPACSP
Trigger: TGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCT...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR GCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGGGGTGCCTGCTCATGTaGCATGTTGAAGGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGGCLLM*HVEGVP
Trigger: AGGGACTCCTTCAACATGGCACATGAGCAGGCACCC...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR GCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTAGCCACATGGGTGCCTaGTCATGTGCCATGTTGAAG +
Preference number: 2 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASSHMGA*SCAMLK
Trigger: CTTCAACATGGCACATGAGCAGGCACCCATGTGGCT...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTCAAACAGGAAATCCCTaGGTCTCAGGTGGAGAGTGC +
Preference number: 2 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASQTGNP*VSGGEC
Trigger: GCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTG...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTCTCAGCAGCCCGCATaGGCTTTACTGGTTGGCCTT +
Preference number: 2 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGSQQPA*ALLVGL
Trigger: AAGGCCAACCAGTAAAGCCCATGCGGGCTGCTGAGA...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGAGGGTTGAAGCCACATaGGTGCCTGCTCATGTGCCA +
Preference number: 2 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGRVEAT*VPAHVP
Trigger: TGGCACATGAGCAGGCACCCATGTGGCTTCAACCCT...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR CAA 90 bp TCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTaGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGAG +
Preference number: 2 (lower is better)
Translates to: SQVPASQGWGLQGGL*PCNHSHQICLAIFE
Trigger: CTCAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR GCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGTCTCAGGTGGAGAGTaGCGTGCCGTCCTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: EMTDSFLALCSQLESQTSVSGGE*RAVLPA
Trigger: AGCAGGCAGGACGGCACGGCACTCTCCACCTGAGAC...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR GCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGAGCCACATGGGTGCCTaGTCATGTGCCATGTTGAAG +
Preference number: 2 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGSHMGA*SCAMLK
Trigger: CTTCAACATGGCACATGAGCAGGCACCCATGTGGCT...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCATCCCTGGGTCTCAGGTaGAGAGTGCCGTGCCGTCCT +
Preference number: 2 (lower is better)
Translates to: EMTDSFLALCSQLESQTSSLGLR*RVPCRP
Trigger: AGGACGGCACGGCACTCTCCACCTGAGACCCAGGGA...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTCTCAGCAGCCCGCATaGGCTTTACTGGTTGGCCTT +
Preference number: 2 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGSQQPA*ALLVGL
Trigger: AAGGCCAACCAGTAAAGCCCATGCGGGCTGCTGAGA...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCAGGGTTGAAGCCACATaGGTGCCTGCTCATGTGCCA +
Preference number: 2 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIRVEAT*VPAHVP
Trigger: TGGCACATGAGCAGGCACCCATGTGGCTTCAACCCT...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCGCCCTAGGGGAGCTCTaGGCAGGGTTTTACACATTC +
Preference number: 2 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIALGEL*AGFYTF
Trigger: GAATGTGTAAAACCCTGCCCAGAGCTCCCCTAGGGC...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR CAA 90 bp AGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTaGAAGCCACATGGGTGCCTGCTCATGTGCCATGTTGAAGGAGTC +
Preference number: 2 (lower is better)
Translates to: RAESSFLATQMGLSG*KPHGCLLMCHVEGV
Trigger: GACTCCTTCAACATGGCACATGAGCAGGCACCCATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCATGGGCTTTACTGGTTaGCCTTACACTCAAACAGGA +
Preference number: 2 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVAMGFTG*PYTQTG
Trigger: TCCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCAT...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGCCGCATGGGCTTTACTaGTTGGCCTTACACTCAAAC +
Preference number: 2 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGPHGLY*LALHSN
Trigger: GTTTGAGTGTAAGGCCAACCAGTAAAGCCCATGCGG...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR TCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTTTTGAGGGGCTTTCCTaGGATGACAGATTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASFEGLS*DDRFLS
Trigger: AGAAAGGAATCTGTCATCTCAGGAAAGCCCCTCAAA...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR GCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGGGGTGCCTGCTCATGTaGCATGTTGAAGGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: RVASCPVTTVIKYASPSLGCLLM*HVEGVP
Trigger: AGGGACTCCTTCAACATGGCACATGAGCAGGCACCC...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR GCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGCACAGTCATCAAATATaGCTCGCCATCTTTGAGGGG +
Preference number: 2 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGHSHQI*LAIFEG
Trigger: CCCCTCAAAGATGGCGAGGCATATTTGATGACTGTG...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTCCGCATGGGCTTTACTaGTTGGCCTTACACTCAAAC +
Preference number: 2 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGPHGLY*LALHSN
Trigger: GTTTGAGTGTAAGGCCAACCAGTAAAGCCCATGCGG...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCCCGCATGGGCTTTACTaGTTGGCCTTACACTCAAAC +
Preference number: 2 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIPHGLY*LALHSN
Trigger: GTTTGAGTGTAAGGCCAACCAGTAAAGCCCATGCGG...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGTCTCAGCAGCCCGCATaGGCTTTACTGGTTGGCCTT +
Preference number: 2 (lower is better)
Translates to: RVASCPVTTVIKYASPSLSQQPA*ALLVGL
Trigger: AAGGCCAACCAGTAAAGCCCATGCGGGCTGCTGAGA...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR GCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTAGGTGGAGAGTGCCGTaGCGTCCTGCCTGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSRWRVP*RPACSP
Trigger: TGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCT...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGCCGCATGGGCTTTACTaGTTGGCCTTACACTCAAAC +
Preference number: 2 (lower is better)
Translates to: TDSFLALCSQLESQTSAWPHGLY*LALHSN
Trigger: GTTTGAGTGTAAGGCCAACCAGTAAAGCCCATGCGG...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCATCTCAGCAGCCCGCATaGGCTTTACTGGTTGGCCTT +
Preference number: 2 (lower is better)
Translates to: EMTDSFLALCSQLESQTSSQQPA*ALLVGL
Trigger: AAGGCCAACCAGTAAAGCCCATGCGGGCTGCTGAGA...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAAGGGTTGAAGCCACATaGGTGCCTGCTCATGTGCCA +
Preference number: 2 (lower is better)
Translates to: EMTDSFLALCSQLESQTSRVEAT*VPAHVP
Trigger: TGGCACATGAGCAGGCACCCATGTGGCTTCAACCCT...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR TCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGGCTCATGTGCCATGTTaGAGGAGTCCCTGTCCGCCT +
Preference number: 2 (lower is better)
Translates to: QMSILGRRTIPYSLALGEAHVPC*RSPCPP
Trigger: AGGCGGACAGGGACTCCTTCAACATGGCACATGAGC...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR TCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGAGGGGCTTTCCTaGGATGACAGATTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIFEGLS*DDRFLS
Trigger: AGAAAGGAATCTGTCATCTCAGGAAAGCCCCTCAAA...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR GCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAAGCCACATGGGTGCCTaGTCATGTGCCATGTTGAAG +
Preference number: 2 (lower is better)
Translates to: EMTDSFLALCSQLESQTSSHMGA*SCAMLK
Trigger: CTTCAACATGGCACATGAGCAGGCACCCATGTGGCT...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCACAAACAGGAAATCCCTaGGTCTCAGGTGGAGAGTGC +
Preference number: 2 (lower is better)
Translates to: EMTDSFLALCSQLESQTSQTGNP*VSGGEC
Trigger: GCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTG...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTATGGGCTTTACTGGTTaGCCTTACACTCAAACAGGA +
Preference number: 2 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGMGFTG*PYTQTG
Trigger: TCCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCAT...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGCTGAGAGCAGTTTCTTaGCTACACAGATGGGTCTGT +
Preference number: 2 (lower is better)
Translates to: TDSFLALCSQLESQTSAWLRAVS*LHRWVC
Trigger: ACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAG...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR CAA 90 bp GCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTaGAGGGGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGT +
Preference number: 2 (lower is better)
Translates to: ASCPVTTVIKYASPS*RGFPEMTDSFLALC
Trigger: ACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCCCCTCAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGATGGGCTTTACTGGTTaGCCTTACACTCAAACAGGA +
Preference number: 2 (lower is better)
Translates to: TDSFLALCSQLESQTSAWMGFTG*PYTQTG
Trigger: TCCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCAT...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACCGCATGGGCTTTACTaGTTGGCCTTACACTCAAAC +
Preference number: 2 (lower is better)
Translates to: GFPEMTDSFLALCSQLESPHGLY*LALHSN
Trigger: GTTTGAGTGTAAGGCCAACCAGTAAAGCCCATGCGG...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR TCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTGCTCATGTGCCATGTTaGAGGAGTCCCTGTCCGCCT +
Preference number: 2 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSAHVPC*RSPCPP
Trigger: AGGCGGACAGGGACTCCTTCAACATGGCACATGAGC...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATATGGGCTTTACTGGTTaGCCTTACACTCAAACAGGA +
Preference number: 2 (lower is better)
Translates to: AESSFLATQMGLSGLKPHMGFTG*PYTQTG
Trigger: TCCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCAT...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCACTGAGAGCAGTTTCTTaGCTACACAGATGGGTCTGT +
Preference number: 2 (lower is better)
Translates to: EMTDSFLALCSQLESQTSLRAVS*LHRWVC
Trigger: ACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAG...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CAA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTGCTCATGTGCCATGTaGAAGGAGTCCCTGTCCGCC +
Preference number: 3 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVACSCAM*KESLSA
Trigger: GGCGGACAGGGACTCCTTCAACATGGCACATGAGCA...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CAA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTATGGGTCTGTCAGGGTaGAAGCCACATGGGTGCCTG +
Preference number: 3 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASMGLSG*KPHGCL
Trigger: CAGGCACCCATGTGGCTTCAACCCTGACAGACCCAT...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CAA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCATGGGTCTGTCAGGGTaGAAGCCACATGGGTGCCTG +
Preference number: 3 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIMGLSG*KPHGCL
Trigger: CAGGCACCCATGTGGCTTCAACCCTGACAGACCCAT...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CAA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTGCTGAGAGCAGTTTCTaGGCTACACAGATGGGTCTG +
Preference number: 3 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASAESSF*ATQMGL
Trigger: CAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR CCA 72 bp GTCCGCCTCTCAGCAGCCCGCATGGGCTTTACTGGTTaGCCTTACACTCAAACAGGAAATCCCTGGGTCTCA +
Preference number: 3 (lower is better)
Translates to: VRLSAARMGFTG*PYTQTGNPWVS
Trigger: TGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCATGCGGGCTGCTGAGAGGCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CAA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTCATGGGCTTTACTGGTaGGCCTTACACTCAAACAGG +
Preference number: 3 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASHGLYW*ALHSNR
Trigger: CCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCATG...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CAA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGATGGGTCTGTCAGGGTaGAAGCCACATGGGTGCCTG +
Preference number: 3 (lower is better)
Translates to: TDSFLALCSQLESQTSAWMGLSG*KPHGCL
Trigger: CAGGCACCCATGTGGCTTCAACCCTGACAGACCCAT...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CAA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGGCTGAGAGCAGTTTCTaGGCTACACAGATGGGTCTG +
Preference number: 3 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGAESSF*ATQMGL
Trigger: CAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CAA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTATGCCTCGCCATCTTaGAGGGGCTTTCCTGAGATG +
Preference number: 3 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGYASPS*RGFPEM
Trigger: CATCTCAGGAAAGCCCCTCAAAGATGGCGAGGCATA...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR CCA 72 bp TTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTaGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCT +
Preference number: 3 (lower is better)
Translates to: FTGWPYTQTGNP*VSGGECRAVLP
Trigger: AGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR TCA 72 bp GCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTaGAGCCACATGGGTGCCTGCTCATGTGCCATGTTG +
Preference number: 3 (lower is better)
Translates to: AVSWLHRWVCQG*SHMGACSCAML
Trigger: CAACATGGCACATGAGCAGGCACCCATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CAA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTCATGGGCTTTACTGGTaGGCCTTACACTCAAACAGG +
Preference number: 3 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGHGLYW*ALHSNR
Trigger: CCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCATG...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CAA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGGCTGAGAGCAGTTTCTaGGCTACACAGATGGGTCTG +
Preference number: 3 (lower is better)
Translates to: RVASCPVTTVIKYASPSLAESSF*ATQMGL
Trigger: CAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CAA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATCATGGGCTTTACTGGTaGGCCTTACACTCAAACAGG +
Preference number: 3 (lower is better)
Translates to: AESSFLATQMGLSGLKPHHGLYW*ALHSNR
Trigger: CCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCATG...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CAA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGCATGGGCTTTACTGGTaGGCCTTACACTCAAACAGG +
Preference number: 3 (lower is better)
Translates to: RVASCPVTTVIKYASPSLHGLYW*ALHSNR
Trigger: CCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCATG...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CAA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGATGGGTCTGTCAGGGTaGAAGCCACATGGGTGCCTG +
Preference number: 3 (lower is better)
Translates to: QMSILGRRTIPYSLALGEMGLSG*KPHGCL
Trigger: CAGGCACCCATGTGGCTTCAACCCTGACAGACCCAT...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR-3UTR CAA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGGCTGAGAGCAGTTTCTaGGCTACACAGATGGGTCTG +
Preference number: 3 (lower is better)
Translates to: QMSILGRRTIPYSLALGEAESSF*ATQMGL
Trigger: CAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
3UTR CCA 72 bp AGGACAATCCCTTATAGCTTAGCCCTAGGGGAGCTCTaGGCAGGGTTTTACACATTCTTTCTGAAAGTAAGG +
Preference number: 3 (lower is better)
Translates to: RTIPYSLALGEL*AGFYTFFLKVR
Trigger: CCTTACTTTCAGAAAGAATGTGTAAAACCCTGCCCAGAGCTCCCCTAGGGCTAAGCTATAAGGGATTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCGGTGGCTGCAGCGGATaGCCTGCACCAGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRAGGCSG*PAPGRC
Trigger: ACAGCGGCCTGGTGCAGGGCATCCGCTGCAGCCACC...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCGTCAGGGGTGGGGGCTaGAGGGTGGCCTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRAVRGGG*RVASCP
Trigger: AGGGCAAGAGGCCACCCTGCAGCCCCCACCCCTGAC...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCCCAGCAAGTCAGGGGTaGGGGCTGCAGGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRAPASQG*GLQGGL
Trigger: GAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGG...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCTGCCGCCCTCGCTGTTaGGGAAGGCGCACACGTAGC +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRACRPRC*GRRTRS
Trigger: GCTACGTGTGCGCCTTCCTCAACAGCGAGGGCGGCA...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCCCTCGTCACGGTGGCTaGAGCGGATGCCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRAPRHGG*SGCPAP
Trigger: TGGTGCAGGGCATCCGCTGCAGCCACCGTGACGAGG...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCCAGGACACAGGCCCGTaGTGCTGCAGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRAQDTGP*CCSCCW
Trigger: CCAGCAGCAGCTGCAGCAGCACGGGCCTGTGTCCTG...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCGTCTCAGGTGGAGAGTaGCGTGCCGTCCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRAVSGGE*RAVLPA
Trigger: AGCAGGCAGGACGGCACGGCACTCTCCACCTGAGAC...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCCTCACCACTTCAATGTaGTCCCGCGCCACCGGCATC +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRALTTSM*SRATGI
Trigger: GATGCCGGTGGCGCGGGAGCACATTGAAGTGGTGAG...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGGCAGACAGCGGGCCCTaGATGCTCCCGTCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLADSGP*MLPSRR
Trigger: GCGGCGCGACGGGAGCATCCAGGGCCCGCTGTCTGC...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR GCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCTCCAGGATTCCTCACTaGTGGCTGCTTCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRASRIPH*WLLLPG
Trigger: CCCTGGGAGAAGCAGCCAGCAGTGAGGAATCCTGGA...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCCTCCAGGGCCGTCTaGAGGCGCCAGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVASSRAV*RRQGRE
Trigger: CTCCCTCCCCTGGCGCCTGCAGACGGCCCTGGAGGA...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCCCCACGATCTGCTGGTaGACAATGGCACTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRAPTICW*TMALSE
Trigger: CTCCGACAGTGCCATTGTGCACCAGCAGATCGTGGG...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGAGTGCCGTGCCGTCCTaGCTGCTCCCCAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLSAVPS*LLPRAL
Trigger: GAGGGCCCTGGGGAGCAGGCAGGACGGCACGGCACT...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCACCGGCACTGAGAACTaGGGGTTCAGATGGCCCACA +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRATGTEN*GFRWPT
Trigger: TGTGGGCCATCTGAACCCCCAGTTCTCAGTGCCGGT...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCTGGCTGAAGGGCCCTTaGGCCTCACTCAATAGCAGG +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRAWLKGP*ASLNSR
Trigger: CCTGCTATTGAGTGAGGCCCAAGGGCCCTTCAGCCA...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTGCAGACAGCGGGCCCTaGATGCTCCCGTCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASADSGP*MLPSRR
Trigger: GCGGCGCGACGGGAGCATCCAGGGCCCGCTGTCTGC...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCACTCTGAGGACTGGCTaGTGGCCCCATTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRATLRTG*WPHCSF
Trigger: GAAGCTGCAATGGGGCCACCAGCCAGTCCTCAGAGT...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR TCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGGGGAGGTGCCTGCCCTaGGCTCCCATAGCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLGRCLP*APIASR
Trigger: TCGGGAGGCTATGGGAGCTCAGGGCAGGCACCTCCC...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCTCCTTGCCCACGATCTaGTGGTGCACAATGGCACTG +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRASLPTI*WCTMAL
Trigger: CAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGA...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGGTCCACCAGCAGGCGTaGGCGGTCCTCGTCACGGTG +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLVHQQA*AVLVTV
Trigger: CACCGTGACGAGGACCGCGCACGCCTGCTGGTGGAC...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCGGGTGCCTGCTCATGTaGCATGTTGAAGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRAGCLLM*HVEGVP
Trigger: AGGGACTCCTTCAACATGGCACATGAGCAGGCACCC...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCTGCAGGGTGGCCTCTTaGCCTGTAACCACAGTCATC +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRACRVAS*PVTTVI
Trigger: GATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCA...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTGCTCCCGCGGGAGCATaGGAGGTGCCTGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASAPAGA*EVPALS
Trigger: GCTCAGGGCAGGCACCTCCCATGCTCCCGCGGGAGC...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCGGTCCTCGTCACGGTaGCTGCAGCGGATGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLRSSSR*LQRMPC
Trigger: GCAGGGCATCCGCTGCAGCCACCGTGACGAGGACCG...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCAGGGTTGAAGCCACATaGGTGCCTGCTCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRARVEAT*VPAHVP
Trigger: TGGCACATGAGCAGGCACCCATGTGGCTTCAACCCT...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGTGCCGCCCTCGCTGTTaGGGAAGGCGCACACGTAGC +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLCRPRC*GRRTRS
Trigger: GCTACGTGTGCGCCTTCCTCAACAGCGAGGGCGGCA...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTTCCTCCAGGGCCGTCTaGAGGCGCCAGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRSSRAV*RRQGRE
Trigger: CTCCCTCCCCTGGCGCCTGCAGACGGCCCTGGAGGA...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTGTCCACCAGCAGGCGTaGGCGGTCCTCGTCACGGTG +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASVHQQA*AVLVTV
Trigger: CACCGTGACGAGGACCGCGCACGCCTGCTGGTGGAC...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGTGGGCCTTGGGGGTGTaGACGGTCAGGCGGATCACC +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLWALGV*TVRRIT
Trigger: GGTGATCCGCCTGACCGTGCACACCCCCAAGGCCCA...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR GCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTGTCAGGGGTGGGGGCTaGAGGGTGGCCTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASVRGGG*RVASCP
Trigger: AGGGCAAGAGGCCACCCTGCAGCCCCCACCCCTGAC...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCGCTCCCGCGGGAGCATaGGAGGTGCCTGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVAPAGA*EVPALS
Trigger: GCTCAGGGCAGGCACCTCCCATGCTCCCGCGGGAGC...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTCGGTCCTCGTCACGGTaGCTGCAGCGGATGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASRSSSR*LQRMPC
Trigger: GCAGGGCATCCGCTGCAGCCACCGTGACGAGGACCG...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCGCAGACAGCGGGCCCTaGATGCTCCCGTCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIADSGP*MLPSRR
Trigger: GCGGCGCGACGGGAGCATCCAGGGCCCGCTGTCTGC...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCGAAAGCAGAGTCACGTaGACTGAGCAAGACACAGGG +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRAESRVT*TEQDTG
Trigger: CCCTGTGTCTTGCTCAGTCCACGTGACTCTGCTTTC...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCAAGACACAGGGCCTGTaGGAAGACGGGATCTTCATG +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRAKTQGL*EDGIFM
Trigger: CATGAAGATCCCGTCTTCCCACAGGCCCTGTGTCTT...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372611.5
CDS-3UTR TCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCGGGAGGTGCCTGCCCTaGGCTCCCATAGCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVGRCLP*APIASR
Trigger: TCGGGAGGCTATGGGAGCTCAGGGCAGGCACCTCCC...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTGGGAGGTGCCTGCCCTaGGCTCCCATAGCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRGRCLP*APIASR
Trigger: TCGGGAGGCTATGGGAGCTCAGGGCAGGCACCTCCC...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCCACCTGTGTTTGCACTaGTCTCTTCATGGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRAHLCLH*SLHGGH
Trigger: ATGACCCCCATGAAGAGATCAGTGCAAACACAGGTG...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTTGCCGCCCTCGCTGTTaGGGAAGGCGCACACGTAGC +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASCRPRC*GRRTRS
Trigger: GCTACGTGTGCGCCTTCCTCAACAGCGAGGGCGGCA...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCCTTAACCCAGGACTCTaGGGACTGGCTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVALNPGL*GLAGGP
Trigger: GGGGCCACCAGCCAGTCCTCAGAGTCCTGGGTTAAG...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR GCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGAGTCACCTGCACCAGTaGATAGGCCTTCCGCGGCCG +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLSHLHQ*IGLPRP
Trigger: CGGCCGCGGAAGGCCTATGCACTGGTGCAGGTGACT...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGGGTGGCTGCAGCGGATaGCCTGCACCAGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGGGCSG*PAPGRC
Trigger: ACAGCGGCCTGGTGCAGGGCATCCGCTGCAGCCACC...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTACAGCGGGCCCTGGATaGTCCCGTCGCGCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRTAGPG*SRRAAE
Trigger: TTCTGCGGCGCGACGGGAGCATCCAGGGCCCGCTGT...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR GCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGACAGCGGGCCCTGGATaGTCCCGTCGCGCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGTAGPG*SRRAAE
Trigger: TTCTGCGGCGCGACGGGAGCATCCAGGGCCCGCTGT...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR GCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTCCAGCCACCTCTGCCTaGACCACTCCTGGATGGCGC +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASPATSA*TTPGWR
Trigger: GCGCCATCCAGGAGTGGTGCAGGCAGAGGTGGCTGG...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR GCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTAGTGCCGTGCCGTCCTaGCTGCTCCCCAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGSAVPS*LLPRAL
Trigger: GAGGGCCCTGGGGAGCAGGCAGGACGGCACGGCACT...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTGTCAGGGGTGGGGGCTaGAGGGTGGCCTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRVRGGG*RVASCP
Trigger: AGGGCAAGAGGCCACCCTGCAGCCCCCACCCCTGAC...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCGCTCCCGCGGGAGCATaGGAGGTGCCTGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIAPAGA*EVPALS
Trigger: GCTCAGGGCAGGCACCTCCCATGCTCCCGCGGGAGC...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGGCTGGCTCTGGGCCTTaGGGGTGTGCACGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGAGSGP*GCARSG
Trigger: GCCTGACCGTGCACACCCCCAAGGCCCAGAGCCAGC...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTAGTTGCGGCTGGCTCTaGGCCTTGGGGGTGTGCACG +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASSCGWL*ALGVCT
Trigger: CGTGCACACCCCCAAGGCCCAGAGCCAGCCGCAACT...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGTCCCTGGGTCTCAGGTaGAGAGTGCCGTGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLSLGLR*RVPCRP
Trigger: AGGACGGCACGGCACTCTCCACCTGAGACCCAGGGA...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCCCGCATGGGCTTTACTaGTTGGCCTTACACTCAAAC +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRAPHGLY*LALHSN
Trigger: GTTTGAGTGTAAGGCCAACCAGTAAAGCCCATGCGG...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCAGCAAGTCAGGGGTaGGGGCTGCAGGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRPASQG*GLQGGL
Trigger: GAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGG...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGGGCAGTGCGAGGCTCTaGGGAGAGTGCATTCGGTGC +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLGSARL*GECIRC
Trigger: GCACCGAATGCACTCTCCCCAGAGCCTCGCACTGCC...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR TCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGGGCAAGCACCGGCACTaGGAACTGGGGGTTCAGATG +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLGKHRH*ELGVQM
Trigger: CATCTGAACCCCCAGTTCTCAGTGCCGGTGCTTGCC...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTTCTCCTCTCTGTGGCTaGAGGGCCCTTGGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASSPLCG*RALGPH
Trigger: GTGAGGCCCAAGGGCCCTTCAGCCACAGAGAGGAGA...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCCGCCGCTACCCCGCTTaGACTCCATATTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVARRYPA*TPYCGS
Trigger: AGACCCGCAATATGGAGTTCAAGCGGGGTAGCGGCG...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCCTCACCACTTCAATGTaGTCCCGCGCCACCGGCATC +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVALTTSM*SRATGI
Trigger: GATGCCGGTGGCGCGGGAGCACATTGAAGTGGTGAG...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCAGCGGATGCCCTaGACCAGGCCGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVLQRMP*TRPLSS
Trigger: AGAGGACAGCGGCCTGGTGCAGGGCATCCGCTGCAG...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTGTCCACCAGCAGGCGTaGGCGGTCCTCGTCACGGTG +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGVHQQA*AVLVTV
Trigger: CACCGTGACGAGGACCGCGCACGCCTGCTGGTGGAC...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCACAGCGGGCCCTGGATaGTCCCGTCGCGCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAITAGPG*SRRAAE
Trigger: TTCTGCGGCGCGACGGGAGCATCCAGGGCCCGCTGT...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR GCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTACAGGCCCGTGCTGCTaGAGCTGCTGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRTGPCC*SCCWSC
Trigger: GCAGCTCCAGCAGCAGCTGCAGCAGCACGGGCCTGT...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTAGGTGGAGAGTGCCGTaGCGTCCTGCCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRRWRVP*RPACSP
Trigger: TGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCT...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCGTCAGGGGTGGGGGCTaGAGGGTGGCCTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIVRGGG*RVASCP
Trigger: AGGGCAAGAGGCCACCCTGCAGCCCCCACCCCTGAC...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCTGCAGCTGCTGGGCCTaGGGCCTATCAGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVCSCWA*GLSGSV
Trigger: CACGCTGCCTGATAGGCCCCAGGCCCAGCAGCTGCA...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGCAGCTGCTGGGCCTaGGGCCTATCAGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGCSCWA*GLSGSV
Trigger: CACGCTGCCTGATAGGCCCCAGGCCCAGCAGCTGCA...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATCGGAGCACACGCCGCTaGGCCGGCCCTGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHRSTRR*AGPGSS
Trigger: AGAGCTGCCAGGGCCGGCCCAGCGGCGTGTGCTCCG...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGCGGAGCACACGCCGCTaGGCCGGCCCTGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLRSTRR*AGPGSS
Trigger: AGAGCTGCCAGGGCCGGCCCAGCGGCGTGTGCTCCG...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCGCTGGCTCTGGGCCTTaGGGGTGTGCACGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIAGSGP*GCARSG
Trigger: GCCTGACCGTGCACACCCCCAAGGCCCAGAGCCAGC...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATGCAGACAGCGGGCCCTaGATGCTCCCGTCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHADSGP*MLPSRR
Trigger: GCGGCGCGACGGGAGCATCCAGGGCCCGCTGTCTGC...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCACTCCTGGATGGCGCTaGCAGACAGCGGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVTPGWR*QTAGPG
Trigger: TCCAGGGCCCGCTGTCTGCCAGCGCCATCCAGGAGT...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTCCAGCAAGTCAGGGGTaGGGGCTGCAGGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGPASQG*GLQGGL
Trigger: GAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGG...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGGCAGGCCTCAACTGGTaGCAGTGCGAGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGAGLNW*QCEALG
Trigger: CCCCAGAGCCTCGCACTGCCACCAGTTGAGGCCTGC...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359345.5
3UTR CAA 72 bp CCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTaGCCCTGTAACCACAGTCATCAAATATGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: PASQGWGLQGGL*PCNHSHQICLA
Trigger: GGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGGGGAGGTGCCTGCCCTaGGCTCCCATAGCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWGRCLP*APIASR
Trigger: TCGGGAGGCTATGGGAGCTCAGGGCAGGCACCTCCC...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCTCTCCTCTCTGTGGCTaGAGGGCCCTTGGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVSPLCG*RALGPH
Trigger: GTGAGGCCCAAGGGCCCTTCAGCCACAGAGAGGAGA...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCCAGAGTCACGTGGACTaGGCAAGACACAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVAQSHVD*ARHRAC
Trigger: ACAGGCCCTGTGTCTTGCTCAGTCCACGTGACTCTG...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCCAGGATTCCTCACTaGTGGCTGCTTCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVASRIPH*WLLLPG
Trigger: CCCTGGGAGAAGCAGCCAGCAGTGAGGAATCCTGGA...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTTACTCCGTCAGGGACTaGTCTGCGGGTAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRYSVRD*SAGSSG
Trigger: GCCGGAGCTACCCGCAGAGCAGTCCCTGACGGAGTA...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCAGTCACCTGCACCAGTaGATAGGCCTTCCGCGGCCG +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVSHLHQ*IGLPRP
Trigger: CGGCCGCGGAAGGCCTATGCACTGGTGCAGGTGACT...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGTCCTCCAGGGCCGTCTaGAGGCGCCAGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVESSRAV*RRQGRE
Trigger: CTCCCTCCCCTGGCGCCTGCAGACGGCCCTGGAGGA...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCCTGCAGCGGATGCCCTaGACCAGGCCGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAILQRMP*TRPLSS
Trigger: AGAGGACAGCGGCCTGGTGCAGGGCATCCGCTGCAG...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTGGGCCTTGGGGGTGTaGACGGTCAGGCGGATCACC +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIWALGV*TVRRIT
Trigger: GGTGATCCGCCTGACCGTGCACACCCCCAAGGCCCA...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR GCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCGACACAGGCCCGTGCTaGTGCAGCTGCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIDTGPC*CSCCWS
Trigger: GCTCCAGCAGCAGCTGCAGCAGCACGGGCCTGTGTC...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCCAGGACACAGGCCCGTaGTGCTGCAGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIQDTGP*CCSCCW
Trigger: CCAGCAGCAGCTGCAGCAGCACGGGCCTGTGTCCTG...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATAGTGCCGTGCCGTCCTaGCTGCTCCCCAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHSAVPS*LLPRAL
Trigger: GAGGGCCCTGGGGAGCAGGCAGGACGGCACGGCACT...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTAGGTGGAGAGTGCCGTaGCGTCCTGCCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGRWRVP*RPACSP
Trigger: TGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCT...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCAGGTGGAGAGTGCCGTaGCGTCCTGCCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIRWRVP*RPACSP
Trigger: TGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCT...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTGTCTCAGGTGGAGAGTaGCGTGCCGTCCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRVSGGE*RAVLPA
Trigger: AGCAGGCAGGACGGCACGGCACTCTCCACCTGAGAC...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCGTCTCAGGTGGAGAGTaGCGTGCCGTCCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVVSGGE*RAVLPA
Trigger: AGCAGGCAGGACGGCACGGCACTCTCCACCTGAGAC...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGAAGGCTGGCAGCGCTTaGCCACACTGCTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLKAGSA*PHCFWK
Trigger: CTTCCAGAAGCAGTGTGGGCAAGCGCTGCCAGCCTT...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTGCGGCCCACCCACCATaGAGCTTGGCTGTGGGACAC +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGAAHPP*SLAVGH
Trigger: GTGTCCCACAGCCAAGCTGCATGGTGGGTGGGCCGC...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATGCTCCCGCGGGAGCATaGGAGGTGCCTGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHAPAGA*EVPALS
Trigger: GCTCAGGGCAGGCACCTCCCATGCTCCCGCGGGAGC...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTACCTTCATGTCCTGGTaGCTCCCGCGGGAGCATGGG +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRTFMSW*LPREHG
Trigger: CCCATGCTCCCGCGGGAGCCACCAGGACATGAAGGT...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGATGACCTTCATGTCCTaGTGGCTCCCGCGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLMTFMS*WLPREH
Trigger: ATGCTCCCGCGGGAGCCACCAGGACATGAAGGTCAT...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCACCGGCACTGAGAACTaGGGGTTCAGATGGCCCACA +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVATGTEN*GFRWPT
Trigger: TGTGGGCCATCTGAACCCCCAGTTCTCAGTGCCGGT...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTGGCTGAAGGGCCCTTaGGCCTCACTCAATAGCAGG +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVAWLKGP*ASLNSR
Trigger: CCTGCTATTGAGTGAGGCCCAAGGGCCCTTCAGCCA...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCACGGAGCACACGCCGCTaGGCCGGCCCTGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSRSTRR*AGPGSS
Trigger: AGAGCTGCCAGGGCCGGCCCAGCGGCGTGTGCTCCG...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGCCCAGGAAGGCACCCTaGAAGAGCTGGTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGPRKAP*KSWSLP
Trigger: GGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCTGGG...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTAGTTGCGGCTGGCTCTaGGCCTTGGGGGTGTGCACG +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGSCGWL*ALGVCT
Trigger: CGTGCACACCCCCAAGGCCCAGAGCCAGCCGCAACT...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCACTCCTGGATGGCGCTaGCAGACAGCGGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAITPGWR*QTAGPG
Trigger: TCCAGGGCCCGCTGTCTGCCAGCGCCATCCAGGAGT...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTACTCCTGGATGGCGCTaGCAGACAGCGGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGTPGWR*QTAGPG
Trigger: TCCAGGGCCCGCTGTCTGCCAGCGCCATCCAGGAGT...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGCACCACTCCTGGATaGCGCTGGCAGACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGCTTPG*RWQTAG
Trigger: GCCCGCTGTCTGCCAGCGCCATCCAGGAGTGGTGCA...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCTGCCTGCACCACTCCTaGATGGCGCTGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVCLHHS*MALADS
Trigger: GCTGTCTGCCAGCGCCATCCAGGAGTGGTGCAGGCA...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTTCCCTGGGTCTCAGGTaGAGAGTGCCGTGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRSLGLR*RVPCRP
Trigger: AGGACGGCACGGCACTCTCCACCTGAGACCCAGGGA...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGCCAGCAAGTCAGGGGTaGGGGCTGCAGGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWPASQG*GLQGGL
Trigger: GAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGG...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGGCTCCACCATTTCAGTaGCCCCAGGGGTCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLAPPFQ*PQGSCL
Trigger: AAGACAGGACCCCTGGGGCCACTGAAATGGTGGAGC...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR TCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGGGGAGGTGCCTGCCCTaGGCTCCCATAGCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLGRCLP*APIASR
Trigger: TCGGGAGGCTATGGGAGCTCAGGGCAGGCACCTCCC...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCGTGTCCCGGCTCCTATaGCCTTCATGTCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVVSRLL*PSCPGG
Trigger: GCCACCAGGACATGAAGGTCATAGGAGCCGGGACAC...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302946.12
CDS-3UTR TCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTGGGCTGCCAGCTCCTTaGGGATTAGGTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRGLPAP*GLGAPP
Trigger: TGGAGGAGCACCTAATCCTCAAGGAGCTGGCAGCCC...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCGCCGCTACCCCGCTTaGACTCCATATTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVRRYPA*TPYCGS
Trigger: AGACCCGCAATATGGAGTTCAAGCGGGGTAGCGGCG...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTGCATCGGGAAAGATCTaGGGCTTGAAGCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASASGKI*GLKPCR
Trigger: CCTGCAGGGCTTCAAGCCTCAGATCTTTCCCGATGC...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTTGGGTCTGTCAGGGTTaGAGCCACATGGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRWVCQG*SHMGAC
Trigger: GCAGGCACCCATGTGGCTTCAACCCTGACAGACCCA...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCGGCTCTACTGAGTACTaGCAGGGCCCAGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIGSTEY*QGPAAP
Trigger: GGGAGCAGCTGGGCCCTGTCAGTACTCAGTAGAGCC...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR TCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTGAGAGGAGAGGCCTATaGCCTTCATGTCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASERRGL*PSCPGG
Trigger: GCCACCAGGACATGAAGGTCATAGGCCTCTCCTCTC...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTACTCCGTCAGGGACTaGTCTGCGGGTAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIYSVRD*SAGSSG
Trigger: GCCGGAGCTACCCGCAGAGCAGTCCCTGACGGAGTA...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGCTCACCACTTCAATGTaGTCCCGCGCCACCGGCATC +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGLTTSM*SRATGI
Trigger: GATGCCGGTGGCGCGGGAGCACATTGAAGTGGTGAG...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCATCCTCCAGGGCCGTCTaGAGGCGCCAGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESSSRAV*RRQGRE
Trigger: CTCCCTCCCCTGGCGCCTGCAGACGGCCCTGGAGGA...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTTATTGCGGGTCTCGCTaGCCAGGAAGGCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRYCGSR*PGRHPG
Trigger: TCCAGGGTGCCTTCCTGGGCAGCGAGACCCGCAATA...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGCCAGCCACCTCTGCCTaGACCACTCCTGGATGGCGC +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWPATSA*TTPGWR
Trigger: GCGCCATCCAGGAGTGGTGCAGGCAGAGGTGGCTGG...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR GCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGACAGGCCCGTGCTGCTaGAGCTGCTGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWTGPCC*SCCWSC
Trigger: GCAGCTCCAGCAGCAGCTGCAGCAGCACGGGCCTGT...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGGGGTGCCTGCTCATGTaGCATGTTGAAGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLGCLLM*HVEGVP
Trigger: AGGGACTCCTTCAACATGGCACATGAGCAGGCACCC...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATGTCAGGGGTGGGGGCTaGAGGGTGGCCTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHVRGGG*RVASCP
Trigger: AGGGCAAGAGGCCACCCTGCAGCCCCCACCCCTGAC...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTCTCTTTCAGCGCTGCTaGCTAAAGCCTCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASLFQRC*LKPPPP
Trigger: GGGAGGTGGAGGCTTTAGGCAGCAGCGCTGAAAGAG...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCATGCAGGTCACCTCTTaGCACCTCTTTCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVAMQVTS*HLFQRC
Trigger: GCAGCGCTGAAAGAGGTGGCAAGAGGTGACCTGCAT...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCAGGCCCCAGTTCCCATaGAGGTCACCTCTTGCCACC +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVRPQFP*RSPLAT
Trigger: GGTGGCAAGAGGTGACCTGCATGGGAACTGGGGCCT...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGTGCAGCTGCTGGGCCTaGGGCCTATCAGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWCSCWA*GLSGSV
Trigger: CACGCTGCCTGATAGGCCCCAGGCCCAGCAGCTGCA...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGTTGCCCACGATCTGCTaGTGCACAATGGCACTGTCG +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLLPTIC*CTMALS
Trigger: CGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAA...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCGCACCCTGGAAGAGCTaGTCCTTGCCCACGATCTGC +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVAPWKS*SLPTIC
Trigger: GCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGC...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTGCACCCTGGAAGAGCTaGTCCTTGCCCACGATCTGC +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRAPWKS*SLPTIC
Trigger: GCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGC...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCCCCAGGAAGGCACCCTaGAAGAGCTGGTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIPRKAP*KSWSLP
Trigger: GGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCTGGG...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGGCTGGCTCTGGGCCTTaGGGGTGTGCACGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLAGSGP*GCARSG
Trigger: GCCTGACCGTGCACACCCCCAAGGCCCAGAGCCAGC...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGCCTGCACCACTCCTaGATGGCGCTGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGCLHHS*MALADS
Trigger: GCTGTCTGCCAGCGCCATCCAGGAGTGGTGCAGGCA...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTGCCTGCACCACTCCTaGATGGCGCTGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAICLHHS*MALADS
Trigger: GCTGTCTGCCAGCGCCATCCAGGAGTGGTGCAGGCA...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTCCCTGGGTCTCAGGTaGAGAGTGCCGTGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAISLGLR*RVPCRP
Trigger: AGGACGGCACGGCACTCTCCACCTGAGACCCAGGGA...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGAGGGTTGAAGCCACATaGGTGCCTGCTCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLRVEAT*VPAHVP
Trigger: TGGCACATGAGCAGGCACCCATGTGGCTTCAACCCT...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGCCAGCAAGTCAGGGGTaGGGGCTGCAGGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEPASQG*GLQGGL
Trigger: GAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGG...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTGGGCAGCAGCCAGGTTaGGCTCGGCTTTGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGGQQPG*ARLCVH
Trigger: GTGGACACAAAGCCGAGCCCAACCTGGCTGCTGCCC...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGCAGGACTCTGAGGACTaGCTGGTGGCCCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGQDSED*LVAPLQ
Trigger: CTGCAATGGGGCCACCAGCCAGTCCTCAGAGTCCTG...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTTACACAGGGCCTCCTaGAGAGGAGGCCTTAACCCA +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVALHRAS*RGGLNP
Trigger: TGGGTTAAGGCCTCCTCTCCAGGAGGCCCTGTGTAA...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTAAGACACAGGGCCTGTaGGAAGACGGGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASKTQGL*EDGICP
Trigger: TGGGCAGATCCCGTCTTCCCACAGGCCCTGTGTCTT...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR TCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGTCTCCTCTCTGTGGCTaGAGGGCCCTTGGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWSPLCG*RALGPH
Trigger: GTGAGGCCCAAGGGCCCTTCAGCCACAGAGAGGAGA...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTCGCCGCTACCCCGCTTaGACTCCATATTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGRRYPA*TPYCGS
Trigger: AGACCCGCAATATGGAGTTCAAGCGGGGTAGCGGCG...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGGCATCGGGAAAGATCTaGGGCTTGAAGCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGASGKI*GLKPCR
Trigger: CCTGCAGGGCTTCAAGCCTCAGATCTTTCCCGATGC...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGGCTCATGTGCCATGTTaGAGGAGTCCCTGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGAHVPC*RSPCPP
Trigger: AGGCGGACAGGGACTCCTTCAACATGGCACATGAGC...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGGGTCTGTCAGGGTTaGAGCCACATGGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGWVCQG*SHMGAC
Trigger: GCAGGCACCCATGTGGCTTCAACCCTGACAGACCCA...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCTTATTAATGGAGCTTTaGCAGTCACAAGTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: IPGSQVESAVPSCLLPRALLMEL*QSQVPA
Trigger: TGCTGGAACTTGTGACTGTCAAAGCTCCATTAATAA...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTTCCAGGATTCCTCACTaGTGGCTGCTTCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRSRIPH*WLLLPG
Trigger: CCCTGGGAGAAGCAGCCAGCAGTGAGGAATCCTGGA...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTTCCTTGAGGATTAGGTaGTCCTCCAGGGCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRSLRIR*SSRAVC
Trigger: GCAGACGGCCCTGGAGGAGCACCTAATCCTCAAGGA...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTCCTTGAGGATTAGGTaGTCCTCCAGGGCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGSLRIR*SSRAVC
Trigger: GCAGACGGCCCTGGAGGAGCACCTAATCCTCAAGGA...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCCACGATCTGCTGGTaGACAATGGCACTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRPTICW*TMALSE
Trigger: CTCCGACAGTGCCATTGTGCACCAGCAGATCGTGGG...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGGGAAGAGCTGGTCCTTaGCCACGATCTGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGGRAGP*PRSAGA
Trigger: TGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCC...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATCTGCAGCGGATGCCCTaGACCAGGCCGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHLQRMP*TRPLSS
Trigger: AGAGGACAGCGGCCTGGTGCAGGGCATCCGCTGCAG...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGGTGGCTGCAGCGGATaGCCTGCACCAGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSGGCSG*PAPGRC
Trigger: ACAGCGGCCTGGTGCAGGGCATCCGCTGCAGCCACC...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCAGGTGGCTGCAGCGGATaGCCTGCACCAGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESGGCSG*PAPGRC
Trigger: ACAGCGGCCTGGTGCAGGGCATCCGCTGCAGCCACC...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGCCTCGTCACGGTGGCTaGAGCGGATGCCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEPRHGG*SGCPAP
Trigger: TGGTGCAGGGCATCCGCTGCAGCCACCGTGACGAGG...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGCCAGCCACCTCTGCCTaGACCACTCCTGGATGGCGC +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEPATSA*TTPGWR
Trigger: GCGCCATCCAGGAGTGGTGCAGGCAGAGGTGGCTGG...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR GCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTCCACCAGCCACCTCTaGCTGCACCACTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGSTSHL*LHHSWM
Trigger: CATCCAGGAGTGGTGCAGGCAGAGGTGGCTGGTGGA...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR GCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGACAGGCCCGTGCTGCTaGAGCTGCTGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVETGPCC*SCCWSC
Trigger: GCAGCTCCAGCAGCAGCTGCAGCAGCACGGGCCTGT...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGACAGGCCCGTGCTGCTaGAGCTGCTGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLTGPCC*SCCWSC
Trigger: GCAGCTCCAGCAGCAGCTGCAGCAGCACGGGCCTGT...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGGACACAGGCCCGTGCTaGTGCAGCTGCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLDTGPC*CSCCWS
Trigger: GCTCCAGCAGCAGCTGCAGCAGCACGGGCCTGTGTC...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGCAGGACACAGGCCCGTaGTGCTGCAGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLQDTGP*CCSCCW
Trigger: CCAGCAGCAGCTGCAGCAGCACGGGCCTGTGTCCTG...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGGCTCCAAGCTCCCCCTaGCTCACCCCCTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEAPSSP*LTPSPS
Trigger: TGAGGGAGAGGGGGTGAGGCAGGGGGAGCTTGGAGC...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATGGAGAGTGCATTCGGTaGCCTCTCCTTGCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHGECIR*PLLARP
Trigger: CGGGCGGGCAAGGAGAGGGCACCGAATGCACTCTCC...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCAGGCTCTGGGGAGAGTaGATTCGGTGCCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVRLWGE*IRCPLL
Trigger: AAGGAGAGGGCACCGAATGCACTCTCCCCAGAGCCT...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTGGCTGGTGGCCCCATTaGAGCTTCTCTGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGGWWPH*SFSACS
Trigger: AGAGCAGGCAGAGAAGCTGCAATGGGGCCACCAGCC...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTATGACCTTCATGTCCTaGTGGCTCCCGCGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRMTFMS*WLPREH
Trigger: ATGCTCCCGCGGGAGCCACCAGGACATGAAGGTCAT...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGATGACCTTCATGTCCTaGTGGCTCCCGCGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGMTFMS*WLPREH
Trigger: ATGCTCCCGCGGGAGCCACCAGGACATGAAGGTCAT...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGACCGGCACTGAGAACTaGGGGTTCAGATGGCCCACA +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGTGTEN*GFRWPT
Trigger: TGTGGGCCATCTGAACCCCCAGTTCTCAGTGCCGGT...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGTGCAGCTGCTGGGCCTaGGGCCTATCAGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVECSCWA*GLSGSV
Trigger: CACGCTGCCTGATAGGCCCCAGGCCCAGCAGCTGCA...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTCTGCTGGTGCACAATaGCACTGTCGGAGCACACGC +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGSAGAQ*HCRSTR
Trigger: GCGTGTGCTCCGACAGTGCCATTGTGCACCAGCAGA...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTTCTGCTGGTGCACAATaGCACTGTCGGAGCACACGC +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRSAGAQ*HCRSTR
Trigger: GCGTGTGCTCCGACAGTGCCATTGTGCACCAGCAGA...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCGCACCCTGGAAGAGCTaGTCCTTGCCCACGATCTGC +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIAPWKS*SLPTIC
Trigger: GCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGC...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACGGTCCTCGTCACGGTaGCTGCAGCGGATGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESRSSSR*LQRMPC
Trigger: GCAGGGCATCCGCTGCAGCCACCGTGACGAGGACCG...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATAGTTGCGGCTGGCTCTaGGCCTTGGGGGTGTGCACG +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHSCGWL*ALGVCT
Trigger: CGTGCACACCCCCAAGGCCCAGAGCCAGCCGCAACT...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGTGCACCACTCCTGGATaGCGCTGGCAGACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVECTTPG*RWQTAG
Trigger: GCCCGCTGTCTGCCAGCGCCATCCAGGAGTGGTGCA...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGTCCCTGGGTCTCAGGTaGAGAGTGCCGTGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWSLGLR*RVPCRP
Trigger: AGGACGGCACGGCACTCTCCACCTGAGACCCAGGGA...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCCAAACAGGAAATCCCTaGGTCTCAGGTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVAQTGNP*VSGGEC
Trigger: GCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTG...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGGGCGCAGGCCTCAACTaGTGGCAGTGCGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLGAGLN*WQCEAL
Trigger: CAGAGCCTCGCACTGCCACCAGTTGAGGCCTGCGCC...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGGGTCCCACCACACACTaGAAGCAGACCCAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLGPTTH*KQTQRP
Trigger: GGGCCGCTGGGTCTGCTTCCAGTGTGTGGTGGGACC...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCGGGAACTTGGAGGCTTaGCACAGGGACGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIGNLEA*HRDGQN
Trigger: GTTCTGGCCGTCCCTGTGCCAAGCCTCCAAGTTCCC...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGTTGAGGCAGTTGGCCTaGGGGCATTCAGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLLRQLA*GHSGQT
Trigger: TGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAA...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGACTCTGAGGACTGGCTaGTGGCCCCATTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGTLRTG*WPHCSF
Trigger: GAAGCTGCAATGGGGCCACCAGCCAGTCCTCAGAGT...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTTTACACAGGGCCTCCTaGAGAGGAGGCCTTAACCCA +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASLHRAS*RGGLNP
Trigger: TGGGTTAAGGCCTCCTCTCCAGGAGGCCCTGTGTAA...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGGCTCCACCATTTCAGTaGCCCCAGGGGTCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGAPPFQ*PQGSCL
Trigger: AAGACAGGACCCCTGGGGCCACTGAAATGGTGGAGC...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR TCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGGGGCTGCCAGCTCCTTaGGGATTAGGTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWGLPAP*GLGAPP
Trigger: TGGAGGAGCACCTAATCCTCAAGGAGCTGGCAGCCC...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGTCTCCTCTCTGTGGCTaGAGGGCCCTTGGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVESPLCG*RALGPH
Trigger: GTGAGGCCCAAGGGCCCTTCAGCCACAGAGAGGAGA...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCATGCCGCCCTCGCTGTTaGGGAAGGCGCACACGTAGC +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSCRPRC*GRRTRS
Trigger: GCTACGTGTGCGCCTTCCTCAACAGCGAGGGCGGCA...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCGCTCATGTGCCATGTTaGAGGAGTCCCTGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIAHVPC*RSPCPP
Trigger: AGGCGGACAGGGACTCCTTCAACATGGCACATGAGC...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCGAGAGGAGAGGCCTATaGCCTTCATGTCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIERRGL*PSCPGG
Trigger: GCCACCAGGACATGAAGGTCATAGGCCTCTCCTCTC...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGCTTAACCCAGGACTCTaGGGACTGGCTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVELNPGL*GLAGGP
Trigger: GGGGCCACCAGCCAGTCCTCAGAGTCCTGGGTTAAG...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR TCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCCAGAGTCACGTGGACTaGGCAAGACACAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIQSHVD*ARHRAC
Trigger: ACAGGCCCTGTGTCTTGCTCAGTCCACGTGACTCTG...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCTTCCTCACTGCTGGCTaGTTCTCCCAGGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVFLTAG*FSQGLC
Trigger: ACACAGACCCTGGGAGAAGCAGCCAGCAGTGAGGAA...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGTACTCCGTCAGGGACTaGTCTGCGGGTAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLYSVRD*SAGSSG
Trigger: GCCGGAGCTACCCGCAGAGCAGTCCCTGACGGAGTA...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATTACTCCGTCAGGGACTaGTCTGCGGGTAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHYSVRD*SAGSSG
Trigger: GCCGGAGCTACCCGCAGAGCAGTCCCTGACGGAGTA...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGTCCTCCAGGGCCGTCTaGAGGCGCCAGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGESSRAV*RRQGRE
Trigger: CTCCCTCCCCTGGCGCCTGCAGACGGCCCTGGAGGA...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTTCCTTGCCCACGATCTaGTGGTGCACAATGGCACTG +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRSLPTI*WCTMAL
Trigger: CAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGA...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCTCCTTGCCCACGATCTaGTGGTGCACAATGGCACTG +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVSLPTI*WCTMAL
Trigger: CAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGA...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTCCTTGCCCACGATCTaGTGGTGCACAATGGCACTG +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGSLPTI*WCTMAL
Trigger: CAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGA...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACTGCAGCGGATGCCCTaGACCAGGCCGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESLQRMP*TRPLSS
Trigger: AGAGGACAGCGGCCTGGTGCAGGGCATCCGCTGCAG...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACCTCGTCACGGTGGCTaGAGCGGATGCCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESPRHGG*SGCPAP
Trigger: TGGTGCAGGGCATCCGCTGCAGCCACCGTGACGAGG...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGTCCACCAGCCACCTCTaGCTGCACCACTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWSTSHL*LHHSWM
Trigger: CATCCAGGAGTGGTGCAGGCAGAGGTGGCTGGTGGA...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR GCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGACACAGGCCCGTGCTaGTGCAGCTGCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSDTGPC*CSCCWS
Trigger: GCTCCAGCAGCAGCTGCAGCAGCACGGGCCTGTGTC...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAAGGTGGAGAGTGCCGTaGCGTCCTGCCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSRWRVP*RPACSP
Trigger: TGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCT...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGGTCTCAGGTGGAGAGTaGCGTGCCGTCCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEVSGGE*RAVLPA
Trigger: AGCAGGCAGGACGGCACGGCACTCTCCACCTGAGAC...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGCAGGGTGGCCTCTTaGCCTGTAACCACAGTCATC +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGCRVAS*PVTTVI
Trigger: GATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCA...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTTGCAGGGTGGCCTCTTaGCCTGTAACCACAGTCATC +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRCRVAS*PVTTVI
Trigger: GATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCA...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCCTCTGTCCTGAGCTGTaGACATATGTGCACACACCA +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVALCPEL*TYVHTP
Trigger: TGGTGTGTGCACATATGTGCACAGCTCAGGACAGAG...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR GCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCACCCTCAGGGTTTCCTaGCTACCAGTTCACTCCTGC +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVTLRVS*LPVHSC
Trigger: GCAGGAGTGAACTGGTAGGCAGGAAACCCTGAGGGT...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATACCTTCATGTCCTGGTaGCTCCCGCGGGAGCATGGG +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHTFMSW*LPREHG
Trigger: CCCATGCTCCCGCGGGAGCCACCAGGACATGAAGGT...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGACCTTCATGTCCTGGTaGCTCCCGCGGGAGCATGGG +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLTFMSW*LPREHG
Trigger: CCCATGCTCCCGCGGGAGCCACCAGGACATGAAGGT...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTTCTGTGTTCTCAGTGTaGCTTAAGGGCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASSVFSV*LKGSQR
Trigger: CCTCTGGGAGCCCTTAAGCCACACTGAGAACACAGA...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTGGGAAGGCTCTCCCTaGGAAGGGGTTCCAGGATTC +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIWEGSP*EGVPGF
Trigger: GAATCCTGGAACCCCTTCCCAGGGAGAGCCTTCCCA...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGGGAAGGCTCTCCCTaGGAAGGGGTTCCAGGATTC +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGWEGSP*EGVPGF
Trigger: GAATCCTGGAACCCCTTCCCAGGGAGAGCCTTCCCA...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGGCACCCTGGAAGAGCTaGTCCTTGCCCACGATCTGC +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWAPWKS*SLPTIC
Trigger: GCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGC...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGCCCAGGAAGGCACCCTaGAAGAGCTGGTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLPRKAP*KSWSLP
Trigger: GGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCTGGG...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCATGCACCACTCCTGGATaGCGCTGGCAGACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSCTTPG*RWQTAG
Trigger: GCCCGCTGTCTGCCAGCGCCATCCAGGAGTGGTGCA...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATTCCCTGGGTCTCAGGTaGAGAGTGCCGTGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHSLGLR*RVPCRP
Trigger: AGGACGGCACGGCACTCTCCACCTGAGACCCAGGGA...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCTCTCAGCAGCCCGCATaGGCTTTACTGGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVSQQPA*ALLVGL
Trigger: AAGGCCAACCAGTAAAGCCCATGCGGGCTGCTGAGA...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTACCCACCATGCAGCTTaGCTGTGGGACACACTTCCC +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGTHHAA*LWDTLP
Trigger: GGGAAGTGTGTCCCACAGCCAAGCTGCATGGTGGGT...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTGAAAGCAGAGTCACGTaGACTGAGCAAGACACAGGG +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASESRVT*TEQDTG
Trigger: CCCTGTGTCTTGCTCAGTCCACGTGACTCTGCTTTC...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGGGGAGGTACACAGATTaGCAGAGACTGGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWGRYTD*QRLGRA
Trigger: GGCCCTGCCCAGTCTCTGCCAATCTGTGTACCTCCC...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTGAGTGTCCCGGCTCCTaGGAGGTACACAGATTGGCA +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGECPGS*EVHRLA
Trigger: TGCCAATCTGTGTACCTCCCAGGAGCCGGGACACTC...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGGGGATCTTCATGTCCTaGTGGCTCCCGCGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWGIFMS*WLPREH
Trigger: ATGCTCCCGCGGGAGCCACCAGGACATGAAGATCCC...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372611.5
3UTR CAA 72 bp TGTCCGCCTCTCAGCAGCCCGCATGGGCTTTACTGGTaGGCCTTACACTCAAACAGGAAATCCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: CPPLSSPHGLYW*ALHSNRKSLGL
Trigger: GAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCATGCGGGCTGCTGAGAGGCGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGGGCAAGCACCGGCACTaGGAACTGGGGGTTCAGATG +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEGKHRH*ELGVQM
Trigger: CATCTGAACCCCCAGTTCTCAGTGCCGGTGCTTGCC...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATGGGCTGCCAGCTCCTTaGGGATTAGGTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHGLPAP*GLGAPP
Trigger: TGGAGGAGCACCTAATCCTCAAGGAGCTGGCAGCCC...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGGCTCATGTGCCATGTTaGAGGAGTCCCTGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWAHVPC*RSPCPP
Trigger: AGGCGGACAGGGACTCCTTCAACATGGCACATGAGC...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGTGGGTCTGTCAGGGTTaGAGCCACATGGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEWVCQG*SHMGAC
Trigger: GCAGGCACCCATGTGGCTTCAACCCTGACAGACCCA...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCCTTAGGGTTAGAGAATaGCGGCTCCAAGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAILRVRE*RLQAPP
Trigger: AGGGGGAGCTTGGAGCCGTCATTCTCTAACCCTAAG...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTTCCTCACTGCTGGCTaGTTCTCCCAGGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGFLTAG*FSQGLC
Trigger: ACACAGACCCTGGGAGAAGCAGCCAGCAGTGAGGAA...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGTCCAGGATTCCTCACTaGTGGCTGCTTCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWSRIPH*WLLLPG
Trigger: CCCTGGGAGAAGCAGCCAGCAGTGAGGAATCCTGGA...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATCTCACCACTTCAATGTaGTCCCGCGCCACCGGCATC +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHLTTSM*SRATGI
Trigger: GATGCCGGTGGCGCGGGAGCACATTGAAGTGGTGAG...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGCTCACCACTTCAATGTaGTCCCGCGCCACCGGCATC +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLLTTSM*SRATGI
Trigger: GATGCCGGTGGCGCGGGAGCACATTGAAGTGGTGAG...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCAAGTCACCTGCACCAGTaGATAGGCCTTCCGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESSHLHQ*IGLPRP
Trigger: CGGCCGCGGAAGGCCTATGCACTGGTGCAGGTGACT...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGTCCTTGAGGATTAGGTaGTCCTCCAGGGCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWSLRIR*SSRAVC
Trigger: GCAGACGGCCCTGGAGGAGCACCTAATCCTCAAGGA...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGCCCACGATCTGCTGGTaGACAATGGCACTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWPTICW*TMALSE
Trigger: CTCCGACAGTGCCATTGTGCACCAGCAGATCGTGGG...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGGGAAGAGCTGGTCCTTaGCCACGATCTGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWGRAGP*PRSAGA
Trigger: TGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCC...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGTATTGCGGGTCTCGCTaGCCAGGAAGGCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLYCGSR*PGRHPG
Trigger: TCCAGGGTGCCTTCCTGGGCAGCGAGACCCGCAATA...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGTATTGCGGGTCTCGCTaGCCAGGAAGGCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEYCGSR*PGRHPG
Trigger: TCCAGGGTGCCTTCCTGGGCAGCGAGACCCGCAATA...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGGTCCACCAGCAGGCGTaGGCGGTCCTCGTCACGGTG +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEVHQQA*AVLVTV
Trigger: CACCGTGACGAGGACCGCGCACGCCTGCTGGTGGAC...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGACAGCGGGCCCTGGATaGTCCCGTCGCGCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGETAGPG*SRRAAE
Trigger: TTCTGCGGCGCGACGGGAGCATCCAGGGCCCGCTGT...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR GCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGTCCACCAGCCACCTCTaGCTGCACCACTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLSTSHL*LHHSWM
Trigger: CATCCAGGAGTGGTGCAGGCAGAGGTGGCTGGTGGA...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR GCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCAGCCACATGGGTGCCTaGTCATGTGCCATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVSHMGA*SCAMLK
Trigger: CTTCAACATGGCACATGAGCAGGCACCCATGTGGCT...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCCACAGTCATCAAATATaGCTCGCCATCTTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVAHSHQI*LAIFEG
Trigger: CCCCTCAAAGATGGCGAGGCATATTTGATGACTGTG...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCAGCGCTTGCCCACACTaGTTCTGGAAGCCCCAATTG +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAISACPH*FWKPQL
Trigger: CAATTGGGGCTTCCAGAAGCAGTGTGGGCAAGCGCT...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTCCCACACACCCAGCCTaGATCTTCTCAAATGGAATC +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASPTHPA*IFSNGI
Trigger: GATTCCATTTGAGAAGATGCAGGCTGGGTGTGTGGG...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR GCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCAGCTGTGCACATATGTaGACACACCAGCCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVSCAHM*THQPLY
Trigger: GTAGAGGGGCTGGTGTGTGCACATATGTGCACAGCT...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR GCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCTGGGAAGACGGGATCTaGCCAAAAAGTGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVWEDGI*PKSGRR
Trigger: CCTTCTGCCACTTTTTGGGCAGATCCCGTCTTCCCA...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAACCTTCATGTCCTGGTaGCTCCCGCGGGAGCATGGG +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSTFMSW*LPREHG
Trigger: CCCATGCTCCCGCGGGAGCCACCAGGACATGAAGGT...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGGCACTGATCTCTTCATaGGGGTCATGGGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGALISS*GSWEGS
Trigger: AGAGCCTTCCCATGACCCCCATGAAGAGATCAGTGC...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTGCACTGATCTCTTCATaGGGGTCATGGGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRALISS*GSWEGS
Trigger: AGAGCCTTCCCATGACCCCCATGAAGAGATCAGTGC...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGTGGCTGAAGGGCCCTTaGGCCTCACTCAATAGCAGG +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWWLKGP*ASLNSR
Trigger: CCTGCTATTGAGTGAGGCCCAAGGGCCCTTCAGCCA...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTCGGAGCACACGCCGCTaGGCCGGCCCTGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSRSTRR*AGPGSS
Trigger: AGAGCTGCCAGGGCCGGCCCAGCGGCGTGTGCTCCG...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTGCCCACGATCTGCTaGTGCACAATGGCACTGTCG +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAILPTIC*CTMALS
Trigger: CGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAA...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATGCACCCTGGAAGAGCTaGTCCTTGCCCACGATCTGC +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHAPWKS*SLPTIC
Trigger: GCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGC...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCACCCAGGAAGGCACCCTaGAAGAGCTGGTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSPRKAP*KSWSLP
Trigger: GGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCTGGG...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGGCTGGCTCTGGGCCTTaGGGGTGTGCACGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEAGSGP*GCARSG
Trigger: GCCTGACCGTGCACACCCCCAAGGCCCAGAGCCAGC...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCATGCCTGCACCACTCCTaGATGGCGCTGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESCLHHS*MALADS
Trigger: GCTGTCTGCCAGCGCCATCCAGGAGTGGTGCAGGCA...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTCCGCATGGGCTTTACTaGTTGGCCTTACACTCAAAC +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASPHGLY*LALHSN
Trigger: GTTTGAGTGTAAGGCCAACCAGTAAAGCCCATGCGG...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTCTCAGCAGCCCGCATaGGCTTTACTGGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAISQQPA*ALLVGL
Trigger: AAGGCCAACCAGTAAAGCCCATGCGGGCTGCTGAGA...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCCTGAGAGCAGTTTCTTaGCTACACAGATGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVALRAVS*LHRWVC
Trigger: ACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAG...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTGCCCTAGGGGAGCTCTaGGCAGGGTTTTACACATTC +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGALGEL*AGFYTF
Trigger: GAATGTGTAAAACCCTGCCCAGAGCTCCCCTAGGGC...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGAGCTCTCAGGGAACTTaGAGGCTTGGCACAGGGACG +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWSSQGT*RLGTGT
Trigger: CGTCCCTGTGCCAAGCCTCCAAGTTCCCTGAGAGCT...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372611.5
CDS-3UTR TCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCACCTGTGTTTGCACTaGTCTCTTCATGGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRHLCLH*SLHGGH
Trigger: ATGACCCCCATGAAGAGATCAGTGCAAACACAGGTG...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCAGGCAAGCACCGGCACTaGGAACTGGGGGTTCAGATG +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESGKHRH*ELGVQM
Trigger: CATCTGAACCCCCAGTTCTCAGTGCCGGTGCTTGCC...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGGCAAGCACCGGCACTaGGAACTGGGGGTTCAGATG +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSGKHRH*ELGVQM
Trigger: CATCTGAACCCCCAGTTCTCAGTGCCGGTGCTTGCC...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCACGCCGCTACCCCGCTTaGACTCCATATTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSRRYPA*TPYCGS
Trigger: AGACCCGCAATATGGAGTTCAAGCGGGGTAGCGGCG...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACGCCGCTACCCCGCTTaGACTCCATATTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESRRYPA*TPYCGS
Trigger: AGACCCGCAATATGGAGTTCAAGCGGGGTAGCGGCG...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATGCTCATGTGCCATGTTaGAGGAGTCCCTGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHAHVPC*RSPCPP
Trigger: AGGCGGACAGGGACTCCTTCAACATGGCACATGAGC...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGGCTCATGTGCCATGTTaGAGGAGTCCCTGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLAHVPC*RSPCPP
Trigger: AGGCGGACAGGGACTCCTTCAACATGGCACATGAGC...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTTTGAGGGGCTTTCCTaGGATGACAGATTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVAFEGLS*DDRFLS
Trigger: AGAAAGGAATCTGTCATCTCAGGAAAGCCCCTCAAA...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGAATCCCAGGCTCTACTaGGTACTGACAGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLNPRLY*VLTGPS
Trigger: GCTGGGCCCTGTCAGTACTCAGTAGAGCCTGGGATT...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR TCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGGAGAGGAGAGGCCTATaGCCTTCATGTCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLERRGL*PSCPGG
Trigger: GCCACCAGGACATGAAGGTCATAGGCCTCTCCTCTC...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGCTCAAATGGAATCCTTaGGGCAGTTGGCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVELKWNP*GSWPGG
Trigger: GCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAG...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGCTCAAATGGAATCCTTaGGGCAGTTGGCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLLKWNP*GSWPGG
Trigger: GCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAG...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATCAGAGTCACGTGGACTaGGCAAGACACAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHQSHVD*ARHRAC
Trigger: ACAGGCCCTGTGTCTTGCTCAGTCCACGTGACTCTG...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTTCTGACACCTGTGTTTaGACTGATCTCTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASSDTCV*TDLFMG
Trigger: CCCCATGAAGAGATCAGTGCAAACACAGGTGTCAGA...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGGGAAGAGCTGGTCCTTaGCCACGATCTGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEGRAGP*PRSAGA
Trigger: TGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCC...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCATATTGCGGGTCTCGCTaGCCAGGAAGGCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSYCGSR*PGRHPG
Trigger: TCCAGGGTGCCTTCCTGGGCAGCGAGACCCGCAATA...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGCCTCGTCACGGTGGCTaGAGCGGATGCCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEPRHGG*SGCPAP
Trigger: TGGTGCAGGGCATCCGCTGCAGCCACCGTGACGAGG...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGTGGGCCTTGGGGGTGTaGACGGTCAGGCGGATCACC +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEWALGV*TVRRIT
Trigger: GGTGATCCGCCTGACCGTGCACACCCCCAAGGCCCA...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR GCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCATCCACCAGCCACCTCTaGCTGCACCACTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSSTSHL*LHHSWM
Trigger: CATCCAGGAGTGGTGCAGGCAGAGGTGGCTGGTGGA...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGGACACAGGCCCGTGCTaGTGCAGCTGCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEDTGPC*CSCCWS
Trigger: GCTCCAGCAGCAGCTGCAGCAGCACGGGCCTGTGTC...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGCAGGACACAGGCCCGTaGTGCTGCAGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEQDTGP*CCSCCW
Trigger: CCAGCAGCAGCTGCAGCAGCACGGGCCTGTGTCCTG...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTAGCCACATGGGTGCCTaGTCATGTGCCATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGSHMGA*SCAMLK
Trigger: CTTCAACATGGCACATGAGCAGGCACCCATGTGGCT...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCCAGTGCTCATCATTCTaGAGAAGGCTGGCAGCGCTT +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIQCSSF*RRLAAL
Trigger: AAGCGCTGCCAGCCTTCTGCAGAATGATGAGCACTG...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCACAGGACTGACCAGTaGTCATCATTCTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRHRTDQ*SSFCRR
Trigger: CCTTCTGCAGAATGATGAGCACTGGTCAGTCCTGTG...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCACCAGGCCCTTCTCTGTaGTGGAGACAGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSPGPSL*WRQRLL
Trigger: CAGCAGCCTCTGTCTCCAGCACAGAGAAGGGCCTGG...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGCACCTCTTTCAGCGCTaGTGCCTAAAGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWHLFQR*CLKPPP
Trigger: AGGTGGAGGCTTTAGGCAGCAGCGCTGAAAGAGGTG...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCAGAAGTGGGCGGGGCCTaGACAGCTACCTCTGTGATC +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESEVGGA*TATSVI
Trigger: GATCACAGAGGTAGCTGTGCAGGCCCCGCCCACTTC...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGCTCTGTCCTGAGCTGTaGACATATGTGCACACACCA +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGLCPEL*TYVHTP
Trigger: TGGTGTGTGCACATATGTGCACAGCTCAGGACAGAG...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR GCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTTGCAGCTTCTCTGCCTaGTCTAAAACCCCATGTGAG +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRCSFSA*SKTPCE
Trigger: CTCACATGGGGTTTTAGAGCAGGCAGAGAAGCTGCA...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTGCTCCCGCGGGAGCATaGGAGGTGCCTGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSAPAGA*EVPALS
Trigger: GCTCAGGGCAGGCACCTCCCATGCTCCCGCGGGAGC...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTCTGTGTTCTCAGTGTaGCTTAAGGGCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGSVFSV*LKGSQR
Trigger: CCTCTGGGAGCCCTTAAGCCACACTGAGAACACAGA...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGTGGGAAGGCTCTCCCTaGGAAGGGGTTCCAGGATTC +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEWEGSP*EGVPGF
Trigger: GAATCCTGGAACCCCTTCCCAGGGAGAGCCTTCCCA...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTGCACTGATCTCTTCATaGGGGTCATGGGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGALISS*GSWEGS
Trigger: AGAGCCTTCCCATGACCCCCATGAAGAGATCAGTGC...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGACCGGCACTGAGAACTaGGGGTTCAGATGGCCCACA +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLTGTEN*GFRWPT
Trigger: TGTGGGCCATCTGAACCCCCAGTTCTCAGTGCCGGT...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGTGGCTGAAGGGCCCTTaGGCCTCACTCAATAGCAGG +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLWLKGP*ASLNSR
Trigger: CCTGCTATTGAGTGAGGCCCAAGGGCCCTTCAGCCA...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGTCTGCTGGTGCACAATaGCACTGTCGGAGCACACGC +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLSAGAQ*HCRSTR
Trigger: GCGTGTGCTCCGACAGTGCCATTGTGCACCAGCAGA...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGAGTTGCGGCTGGCTCTaGGCCTTGGGGGTGTGCACG +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGESCGWL*ALGVCT
Trigger: CGTGCACACCCCCAAGGCCCAGAGCCAGCCGCAACT...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGTGCACCACTCCTGGATaGCGCTGGCAGACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGECTTPG*RWQTAG
Trigger: GCCCGCTGTCTGCCAGCGCCATCCAGGAGTGGTGCA...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTCAAACAGGAAATCCCTaGGTCTCAGGTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGQTGNP*VSGGEC
Trigger: GCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTG...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCGCATGGGCTTTACTaGTTGGCCTTACACTCAAAC +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRPHGLY*LALHSN
Trigger: GTTTGAGTGTAAGGCCAACCAGTAAAGCCCATGCGG...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGAGGGTTGAAGCCACATaGGTGCCTGCTCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWRVEAT*VPAHVP
Trigger: TGGCACATGAGCAGGCACCCATGTGGCTTCAACCCT...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCGGTGAGGCAGTAGTTTaGGTAGAGCACTCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVAGEAVV*VEHSRK
Trigger: TTTTCTTGAGTGCTCTACCCAAACTACTGCCTCACC...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGTGCCCACACTGCTTCTaGAAGCCCCAATTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVECPHCF*KPQLGA
Trigger: TGCCCCCAATTGGGGCTTCCAGAAGCAGTGTGGGCA...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATCATTCTGCAGAAGGCTaGCAGCGCTTGCCCACACTG +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHHSAEG*QRLPTL
Trigger: CAGTGTGGGCAAGCGCTGCCAGCCTTCTGCAGAATG...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGGGAGAAACCAAGACGTaGGTGACACACAGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLGETKT*VTHSLY
Trigger: ATAAAGACTGTGTGTCACCCACGTCTTGGTTTCTCC...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGAAACTCAGCTCCCTGTaGGTCCCACCACACACTGGA +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWKLSSL*VPPHTG
Trigger: TCCAGTGTGTGGTGGGACCCACAGGGAGCTGAGTTT...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATCAGGGTTATAGGAAGTaGGCGGGGCCTGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHQGYRK*AGPAQL
Trigger: TAGCTGTGCAGGCCCCGCCCACTTCCTATAACCCTG...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGAGCTCTCAGGGAACTTaGAGGCTTGGCACAGGGACG +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLSSQGT*RLGTGT
Trigger: CGTCCCTGTGCCAAGCCTCCAAGTTCCCTGAGAGCT...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372611.5
CDS-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTTGAGGCAGTTGGCCTaGGGGCATTCAGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGLRQLA*GHSGQT
Trigger: TGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAA...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATCTGAGGACTGGCTGGTaGCCCCATTGCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHLRTGW*PHCSFS
Trigger: AGAGAAGCTGCAATGGGGCCACCAGCCAGTCCTCAG...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTGAAAGCAGAGTCACGTaGACTGAGCAAGACACAGGG +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGESRVT*TEQDTG
Trigger: CCCTGTGTCTTGCTCAGTCCACGTGACTCTGCTTTC...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGGAGTGTCCCGGCTCCTaGGAGGTACACAGATTGGCA +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLECPGS*EVHRLA
Trigger: TGCCAATCTGTGTACCTCCCAGGAGCCGGGACACTC...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAATCTTCATGTCCTGGTaGCTCCCGCGGGAGCATGGG +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSIFMSW*LPREHG
Trigger: CCCATGCTCCCGCGGGAGCCACCAGGACATGAAGAT...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372611.5
CDS-3UTR TCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTCACCTGTGTTTGCACTaGTCTCTTCATGGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGHLCLH*SLHGGH
Trigger: ATGACCCCCATGAAGAGATCAGTGCAAACACAGGTG...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCAGCATCGGGAAAGATCTaGGGCTTGAAGCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESASGKI*GLKPCR
Trigger: CCTGCAGGGCTTCAAGCCTCAGATCTTTCCCGATGC...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGCCGGGAGAAGCACCTTaGCAGACGAAACACCTGAAC +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLPGEAP*QTKHLN
Trigger: GTTCAGGTGTTTCGTCTGTCAAGGTGCTTCTCCCGG...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR TCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGAAACCAAGACGTGGGTaGCACACAGTCTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGKPRRG*HTVFIS
Trigger: GCTGATAAAGACTGTGTGTCACCCACGTCTTGGTTT...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR TCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACTCAAATGGAATCCTTaGGGCAGTTGGCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESLKWNP*GSWPGG
Trigger: GCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAG...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATTTCCTCACTGCTGGCTaGTTCTCCCAGGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHFLTAG*FSQGLC
Trigger: ACACAGACCCTGGGAGAAGCAGCCAGCAGTGAGGAA...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGTTCCTCACTGCTGGCTaGTTCTCCCAGGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLFLTAG*FSQGLC
Trigger: ACACAGACCCTGGGAGAAGCAGCCAGCAGTGAGGAA...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGAGTCACCTGCACCAGTaGATAGGCCTTCCGCGGCCG +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGESHLHQ*IGLPRP
Trigger: CGGCCGCGGAAGGCCTATGCACTGGTGCAGGTGACT...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCAGGAAGAGCTGGTCCTTaGCCACGATCTGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESGRAGP*PRSAGA
Trigger: TGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCC...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCCATGAGGTTCAACAATaGCTTCTTGGCCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIHEVQQ*LLGQPQ
Trigger: CTGTGGCTGGCCAAGAAGGCATTGTTGAACCTCATG...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGGGAAGAGCTGGTCCTTaGCCACGATCTGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLGRAGP*PRSALC
Trigger: ACAGAGAGCAGATCGTGGGCAAGGACCAGCTCTTCC...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372611.5
CDS-3UTR GCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGAGACGGGATCCAGCCTaGATCTTCTCAAATGGAATC +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGRRDPA*IFSNGI
Trigger: GATTCCATTTGAGAAGATGCAGGCTGGATCCCGTCT...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439569.2
CDS-3UTR CCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGGCACTGATCTCTTCATaGGGGTCATGGGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWALISS*GSWEGS
Trigger: AGAGCCTTCCCATGACCCCCATGAAGAGATCAGTGC...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCAACCGGCACTGAGAACTaGGGGTTCAGATGGCCCACA +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESTGTEN*GFRWPT
Trigger: TGTGGGCCATCTGAACCCCCAGTTCTCAGTGCCGGT...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTCGGTCCTCGTCACGGTaGCTGCAGCGGATGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSRSSSR*LQRMPC
Trigger: GCAGGGCATCCGCTGCAGCCACCGTGACGAGGACCG...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTATGGGCTTTACTGGTTaGCCTTACACTCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASMGFTG*PYTQTG
Trigger: TCCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCAT...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGTCTCAGCAGCCCGCATaGGCTTTACTGGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVESQQPA*ALLVGL
Trigger: AAGGCCAACCAGTAAAGCCCATGCGGGCTGCTGAGA...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCTGAGAGCAGTTTCTTaGCTACACAGATGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRLRAVS*LHRWVC
Trigger: ACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAG...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGGCCCTAGGGGAGCTCTaGGCAGGGTTTTACACATTC +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEALGEL*AGFYTF
Trigger: GAATGTGTAAAACCCTGCCCAGAGCTCCCCTAGGGC...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCGGATCTCACGCTTTTTaGCACACTGATGAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVAGSHAF*HTDESY
Trigger: ATAGCTTTCATCAGTGTGCCAAAAAGCGTGAGATCC...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCAAAGACACAGGGCCTGTaGGAAGACGGGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESKTQGL*EDGICP
Trigger: TGGGCAGATCCCGTCTTCCCACAGGCCCTGTGTCTT...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
3UTR CAA 72 bp AGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTaGAAGCCACATGGGTGCCTGCTCATGTGCCATGTT +
Preference number: 4 (lower is better)
Translates to: SSFLATQMGLSG*KPHGCLLMCHV
Trigger: AACATGGCACATGAGCAGGCACCCATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGGGCAAGCACCGGCACTaGGAACTGGGGGTTCAGATG +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEGKHRH*ELGVQM
Trigger: CATCTGAACCCCCAGTTCTCAGTGCCGGTGCTTGCC...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTTGCCGCCCTCGCTGTTaGGGAAGGCGCACACGTAGC +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSCRPRC*GRRTRS
Trigger: GCTACGTGTGCGCCTTCCTCAACAGCGAGGGCGGCA...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGTGGGTCTGTCAGGGTTaGAGCCACATGGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEWVCQG*SHMGAC
Trigger: GCAGGCACCCATGTGGCTTCAACCCTGACAGACCCA...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTTTTGAGGGGCTTTCCTaGGATGACAGATTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRFEGLS*DDRFLS
Trigger: AGAAAGGAATCTGTCATCTCAGGAAAGCCCCTCAAA...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTTTCCCAAATTGACTTaGGTGCAGCAACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGFPKLT*VQQLSP
Trigger: TGGGGAAAGTTGCTGCACTCAAGTCAATTTGGGAAA...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR TCA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGATCTCTTTGGGAAGATaGGGTTGTTACCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGISLGR*GCYLLL
Trigger: CAACAGCAGGTAACAACCTCATCTTCCCAAAGAGAT...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR TCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCACCTCTGTGATCTCATaGGGTTCAACAATGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVTSVIS*GSTMPS
Trigger: AGAAGGCATTGTTGAACCTCATGAGATCACAGAGGT...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR TCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTGCACAGCTACCTCTGTaGTCTCATGAGGTTCAACAA +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGAQLPL*SHEVQQ
Trigger: TTGTTGAACCTCATGAGATCACAGAGGTAGCTGTGC...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTCTGACACCTGTGTTTaGACTGATCTCTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAISDTCV*TDLFMG
Trigger: CCCCATGAAGAGATCAGTGCAAACACAGGTGTCAGA...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTCTGACACCTGTGTTTaGACTGATCTCTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGSDTCV*TDLFMG
Trigger: CCCCATGAAGAGATCAGTGCAAACACAGGTGTCAGA...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGTATTGCGGGTCTCGCTaGCCAGGAAGGCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEYCGSR*PGRHPG
Trigger: TCCAGGGTGCCTTCCTGGGCAGCGAGACCCGCAATA...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTCCTCGTCACGGTGGCTaGAGCGGATGCCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSPRHGG*SGCPAP
Trigger: TGGTGCAGGGCATCCGCTGCAGCCACCGTGACGAGG...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTTGGGCCTTGGGGGTGTaGACGGTCAGGCGGATCACC +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSWALGV*TVRRIT
Trigger: GGTGATCCGCCTGACCGTGCACACCCCCAAGGCCCA...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR GCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGGGTGCCTGCTCATGTaGCATGTTGAAGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSGCLLM*HVEGVP
Trigger: AGGGACTCCTTCAACATGGCACATGAGCAGGCACCC...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTCACAGTCATCAAATATaGCTCGCCATCTTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGHSHQI*LAIFEG
Trigger: CCCCTCAAAGATGGCGAGGCATATTTGATGACTGTG...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCATGCAGGGTGGCCTCTTaGCCTGTAACCACAGTCATC +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESCRVAS*PVTTVI
Trigger: GATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCA...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGATTGGGTGGCTGTTCTaGATGAAATTTCCCAAATTG +
Preference number: 4 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLIGWLF*MKFPKL
Trigger: CAATTTGGGAAATTTCATGCAGAACAGCCACCCAAT...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTAGTCGTGTTGAACTGTaGAGAAATAGCTGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGSRVEL*RNSCPG
Trigger: TCCCGGACAGCTATTTCTGCACAGTTCAACACGACT...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTGATGAGGTTGTTACCTaGTGTTGGAGAAACCAAGAC +
Preference number: 4 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRDEVVT*CWRNQD
Trigger: GTCTTGGTTTCTCCAACAGCAGGTAACAACCTCATC...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGTCTGTGTTCTCAGTGTaGCTTAAGGGCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLSVFSV*LKGSQR
Trigger: CCTCTGGGAGCCCTTAAGCCACACTGAGAACACAGA...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGGCACTGATCTCTTCATaGGGGTCATGGGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEALISS*GSWEGS
Trigger: AGAGCCTTCCCATGACCCCCATGAAGAGATCAGTGC...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCATTGCCCACGATCTGCTaGTGCACAATGGCACTGTCG +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSLPTIC*CTMALS
Trigger: CGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAA...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGCAAACAGGAAATCCCTaGGTCTCAGGTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEQTGNP*VSGGEC
Trigger: GCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTG...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCATGGGCTTTACTGGTTaGCCTTACACTCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVMGFTG*PYTQTG
Trigger: TCCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCAT...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCATCTCAGCAGCCCGCATaGGCTTTACTGGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESSQQPA*ALLVGL
Trigger: AAGGCCAACCAGTAAAGCCCATGCGGGCTGCTGAGA...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCCTGAGAGCAGTTTCTTaGCTACACAGATGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAILRAVS*LHRWVC
Trigger: ACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAG...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTCTGAGAGCAGTTTCTTaGCTACACAGATGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGLRAVS*LHRWVC
Trigger: ACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAG...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCCTAGGGGAGCTCTaGGCAGGGTTTTACACATTC +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSALGEL*AGFYTF
Trigger: GAATGTGTAAAACCCTGCCCAGAGCTCCCCTAGGGC...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGCAAGAAAAGAGGCTATaGTGTGCGGGGAAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEQEKRL*CAGKRG
Trigger: CCCTCTCTTCCCCGCACACCATAGCCTCTTTTCTTG...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGGGCCCTTCTCTGTGCTaGAGACAGAGGCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEGPSLC*RQRLLS
Trigger: GGACAGCAGCCTCTGTCTCCAGCACAGAGAAGGGCC...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATGAAAGCAGAGTCACGTaGACTGAGCAAGACACAGGG +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHESRVT*TEQDTG
Trigger: CCCTGTGTCTTGCTCAGTCCACGTGACTCTGCTTTC...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTTTGAGGGGCTTTCCTaGGATGACAGATTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGFEGLS*DDRFLS
Trigger: AGAAAGGAATCTGTCATCTCAGGAAAGCCCCTCAAA...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGTGCCCTCACAGCAACTaGGGCTATAGCTGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVECPHSN*GYSCFE
Trigger: CTCAAAACAGCTATAGCCTCAGTTGCTGTGAGGGCA...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR TCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCAGAACTAGTCTAGACTaGGTCCTCCATTTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIRTSLD*VLHFWS
Trigger: GGACCAAAAATGGAGGACTCAGTCTAGACTAGTTCT...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR TCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGCAGAGTCACGTGGACTaGGCAAGACACAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEQSHVD*ARHRAC
Trigger: ACAGGCCCTGTGTCTTGCTCAGTCCACGTGACTCTG...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGTCCAGGATTCCTCACTaGTGGCTGCTTCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGESRIPH*WLLLPG
Trigger: CCCTGGGAGAAGCAGCCAGCAGTGAGGAATCCTGGA...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTAGTCACCTGCACCAGTaGATAGGCCTTCCGCGGCCG +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSSHLHQ*IGLPRP
Trigger: CGGCCGCGGAAGGCCTATGCACTGGTGCAGGTGACT...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGTCCTTGAGGATTAGGTaGTCCTCCAGGGCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGESLRIR*SSRAVC
Trigger: GCAGACGGCCCTGGAGGAGCACCTAATCCTCAAGGA...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCATTAGAAAGTATAGGTaGTCTGCAGGCAGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIIRKYR*SAGSLE
Trigger: CTCCAAGCTGCCTGCAGAGCACCTATACTTTCTAAT...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCGTCTCTTTAAGCCACTaGATCACATATTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVVSLSH*ITYFSG
Trigger: GCCAGAGAAATATGTGATGCAGTGGCTTAAAGAGAC...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGAAAGAGGCTATGGTGTaGGGGGAAGAGAGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEKEAMV*GEERGA
Trigger: TGCGCCCCTCTCTTCCCCGCACACCATAGCCTCTTT...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATCCCACACACCCAGCCTaGATCTTCTCAAATGGAATC +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHPTHPA*IFSNGI
Trigger: GATTCCATTTGAGAAGATGCAGGCTGGGTGTGTGGG...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR GCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGTGCAGCTTCTCTGCCTaGTCTAAAACCCCATGTGAG +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVECSFSA*SKTPCE
Trigger: CTCACATGGGGTTTTAGAGCAGGCAGAGAAGCTGCA...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR GCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATCTACCAGTTCACTCCTaGCTCCAGGCAACAGAGAAA +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHLPVHS*LQATEK
Trigger: TTTCTCTGTTGCCTGGAGGCAGGAGTGAACTGGTAG...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCATCTGTGTTCTCAGTGTaGCTTAAGGGCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESSVFSV*LKGSQR
Trigger: CCTCTGGGAGCCCTTAAGCCACACTGAGAACACAGA...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATCCGCATGGGCTTTACTaGTTGGCCTTACACTCAAAC +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHPHGLY*LALHSN
Trigger: GTTTGAGTGTAAGGCCAACCAGTAAAGCCCATGCGG...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCATTGAGGCAGTTGGCCTaGGGGCATTCAGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESLRQLA*GHSGQT
Trigger: TGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAA...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGCTGAGGACTGGCTGGTaGCCCCATTGCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGELRTGW*PHCSFS
Trigger: AGAGAAGCTGCAATGGGGCCACCAGCCAGTCCTCAG...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR TCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCACACCTGTGTTTGCACTaGTCTCTTCATGGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSHLCLH*SLHGGH
Trigger: ATGACCCCCATGAAGAGATCAGTGCAAACACAGGTG...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACACCTGTGTTTGCACTaGTCTCTTCATGGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESHLCLH*SLHGGH
Trigger: ATGACCCCCATGAAGAGATCAGTGCAAACACAGGTG...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGTTTGAGGGGCTTTCCTaGGATGACAGATTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWFEGLS*DDRFLS
Trigger: AGAAAGGAATCTGTCATCTCAGGAAAGCCCCTCAAA...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGTTATCAGCACAGGACTaGCCAGTGCTCATCATTCTG +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLLSAQD*PVLIIL
Trigger: CAGAATGATGAGCACTGGTCAGTCCTGTGCTGATAA...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGTTCCTCACTGCTGGCTaGTTCTCCCAGGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEFLTAG*FSQGLC
Trigger: ACACAGACCCTGGGAGAAGCAGCCAGCAGTGAGGAA...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGTCTGACACCTGTGTTTaGACTGATCTCTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVESDTCV*TDLFMG
Trigger: CCCCATGAAGAGATCAGTGCAAACACAGGTGTCAGA...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGGGGTGCCTGCTCATGTaGCATGTTGAAGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEGCLLM*HVEGVP
Trigger: AGGGACTCCTTCAACATGGCACATGAGCAGGCACCC...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGCACAGTCATCAAATATaGCTCGCCATCTTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEHSHQI*LAIFEG
Trigger: CCCCTCAAAGATGGCGAGGCATATTTGATGACTGTG...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACTACCAGTTCACTCCTaGCTCCAGGCAACAGAGAAA +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESLPVHS*LQATEK
Trigger: TTTCTCTGTTGCCTGGAGGCAGGAGTGAACTGGTAG...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGACCCTCAGGGTTTCCTaGCTACCAGTTCACTCCTGC +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGETLRVS*LPVHSC
Trigger: GCAGGAGTGAACTGGTAGGCAGGAAACCCTGAGGGT...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGTTGCCCACGATCTGCTaGTGCACAATGGCACTGTCG +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGELPTIC*CTMALS
Trigger: CGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAA...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGCTGAGAGCAGTTTCTTaGCTACACAGATGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLLRAVS*LHRWVC
Trigger: ACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAG...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTGGGAGGTACACAGATTaGCAGAGACTGGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSGRYTD*QRLGRA
Trigger: GGCCCTGCCCAGTCTCTGCCAATCTGTGTACCTCCC...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR TCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTGCATCGGGAAAGATCTaGGGCTTGAAGCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSASGKI*GLKPCR
Trigger: CCTGCAGGGCTTCAAGCCTCAGATCTTTCCCGATGC...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGTTTGAGGGGCTTTCCTaGGATGACAGATTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLFEGLS*DDRFLS
Trigger: AGAAAGGAATCTGTCATCTCAGGAAAGCCCCTCAAA...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGAGAACTAGTCTAGACTaGGTCCTCCATTTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLRTSLD*VLHFWS
Trigger: GGACCAAAAATGGAGGACTCAGTCTAGACTAGTTCT...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR GCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTCCCACGATCTGCTGGTaGACAATGGCACTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSPTICW*TMALSE
Trigger: CTCCGACAGTGCCATTGTGCACCAGCAGATCGTGGG...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGAGCTGTGCACATATGTaGACACACCAGCCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGESCAHM*THQPLY
Trigger: GTAGAGGGGCTGGTGTGTGCACATATGTGCACAGCT...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGTGGGAAGACGGGATCTaGCCAAAAAGTGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEWEDGI*PKSGRR
Trigger: CCTTCTGCCACTTTTTGGGCAGATCCCGTCTTCCCA...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTATGACCTTCATGTCCTaGTGGCTCCCGCGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSMTFMS*WLPREH
Trigger: ATGCTCCCGCGGGAGCCACCAGGACATGAAGGTCAT...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTTGGGAAGGCTCTCCCTaGGAAGGGGTTCCAGGATTC +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSWEGSP*EGVPGF
Trigger: GAATCCTGGAACCCCTTCCCAGGGAGAGCCTTCCCA...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTTGGCTGAAGGGCCCTTaGGCCTCACTCAATAGCAGG +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSWLKGP*ASLNSR
Trigger: CCTGCTATTGAGTGAGGCCCAAGGGCCCTTCAGCCA...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTTCTGCTGGTGCACAATaGCACTGTCGGAGCACACGC +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSSAGAQ*HCRSTR
Trigger: GCGTGTGCTCCGACAGTGCCATTGTGCACCAGCAGA...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGATAGCTGTTTTGAGATaGCCAACTCAAGTCGTGTTG +
Preference number: 4 (lower is better)
Translates to: TDSFLALCSQLESQTSAWIAVLR*PTQVVL
Trigger: CAACACGACTTGAGTTGGCCATCTCAAAACAGCTAT...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGCATGCAGCTTGGCTGTaGGACACACTTCCCCACTTA +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEHAAWL*DTLPHL
Trigger: TAAGTGGGGAAGTGTGTCCCACAGCCAAGCTGCATG...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTTGCAGGGTGGCCTCTTaGCCTGTAACCACAGTCATC +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSCRVAS*PVTTVI
Trigger: GATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCA...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAATGGGCTTTACTGGTTaGCCTTACACTCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: EMTDSFLALCSQLESQTSMGFTG*PYTQTG
Trigger: TCCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCAT...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATGGATCTCACGCTTTTTaGCACACTGATGAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: AESSFLATQMGLSGLKPHGSHAF*HTDESY
Trigger: ATAGCTTTCATCAGTGTGCCAAAAAGCGTGAGATCC...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR TCA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGTTATTAATGGAGCTTTaGCAGTCACAAGTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RVASCPVTTVIKYASPSLLLMEL*QSQVPA
Trigger: TGCTGGAACTTGTGACTGTCAAAGCTCCATTAATAA...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGACTAAGAAAGCTGTTTaGCAGCGTAGAGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGETKKAV*QRREAA
Trigger: GGCAGCTTCTCTACGCTGTCAAACAGCTTTCTTAGT...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR GCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGCACAGTCATCAAATATaGCTCGCCATCTTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEHSHQI*LAIFEG
Trigger: CCCCTCAAAGATGGCGAGGCATATTTGATGACTGTG...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTCAAACAGGAAATCCCTaGGTCTCAGGTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSQTGNP*VSGGEC
Trigger: GCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTG...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR TCA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCATTATTAATGGAGCTTTaGCAGTCACAAGTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GFPEMTDSFLALCSQLESLLMEL*QSQVPA
Trigger: TGCTGGAACTTGTGACTGTCAAAGCTCCATTAATAA...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGATGGGCTTTACTGGTTaGCCTTACACTCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEMGFTG*PYTQTG
Trigger: TCCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCAT...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CCA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTGTTGTTACCTGCTGTTaGAGAAACCAAGACGTGGGT +
Preference number: 4 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSVVTCC*RNQDVG
Trigger: ACCCACGTCTTGGTTTCTCCAACAGCAGGTAACAAC...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR TCA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGTTTAACAGCCTTCTGTaGGCTGAATCAGTTCTACTT +
Preference number: 4 (lower is better)
Translates to: QMSILGRRTIPYSLALGEFNSLL*AESVLL
Trigger: AAGTAGAACTGATTCAGCTCACAGAAGGCTGTTAAA...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS GCA 90 bp AGCAGGCGTGCGCGGTCCTCGTCACGGTGGCTGCAGCGGATGCCCTaGACCAGGCCGCTGTCCTCTACTCCCACGAGCAGGCTGCCGCCC +
Preference number: 5 (lower is better)
Translates to: SRRARSSSRWLQRMP*TRPLSSTPTSRLPP
Trigger: GGGCGGCAGCCTGCTCGTGGGAGTAGAGGACAGCGGCCTGGTGCAGGGCATCCGCTGCAGCCACCGTGACGAGGACCGCGCACGCCTGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 90 bp CCACCAGCAGGCGTGCGCGGTCCTCGTCACGGTGGCTGCAGCGGATaGCCTGCACCAGGCCGCTGTCCTCTACTCCCACGAGCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: PPAGVRGPRHGGCSG*PAPGRCPLLPRAGC
Trigger: GCAGCCTGCTCGTGGGAGTAGAGGACAGCGGCCTGGTGCAGGGCATCCGCTGCAGCCACCGTGACGAGGACCGCGCACGCCTGCTGGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 90 bp GGGGCGCAGGCCTCAACTGGTGGCAGTGCGAGGCTCTGGGGAGAGTaGATTCGGTGCCCTCTCCTTGCCCGCCCGGGCAGCAGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: GAQASTGGSARLWGE*IRCPLLARPGSSQV
Trigger: AACCTGGCTGCTGCCCGGGCGGGCAAGGAGAGGGCACCGAATGCACTCTCCCCAGAGCCTCGCACTGCCACCAGTTGAGGCCTGCGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CCA 90 bp GGGAAGAGAGGGGCGCAGGCCTCAACTGGTGGCAGTGCGAGGCTCTaGGGAGAGTGCATTCGGTGCCCTCTCCTTGCCCGCCCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GKRGAQASTGGSARL*GECIRCPLLARPGS
Trigger: GCTGCCCGGGCGGGCAAGGAGAGGGCACCGAATGCACTCTCCCCAGAGCCTCGCACTGCCACCAGTTGAGGCCTGCGCCCCTCTCTTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS GCA 90 bp CGGGCTGCCAGCTCCTTGAGGATTAGGTGCTCCTCCAGGGCCGTCTaGAGGCGCCAGGGGAGGGAGGCCAGGGTGTCCCTGTGGACAGTC +
Preference number: 5 (lower is better)
Translates to: RAASSLRIRCSSRAV*RRQGREARVSLWTV
Trigger: GACTGTCCACAGGGACACCCTGGCCTCCCTCCCCTGGCGCCTGCAGACGGCCCTGGAGGAGCACCTAATCCTCAAGGAGCTGGCAGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 90 bp GGATGGAGTCCACCAGCAGGCGTGCGCGGTCCTCGTCACGGTGGCTaGAGCGGATGCCCTGCACCAGGCCGCTGTCCTCTACTCCCACGA +
Preference number: 5 (lower is better)
Translates to: GWSPPAGVRGPRHGG*SGCPAPGRCPLLPR
Trigger: TCGTGGGAGTAGAGGACAGCGGCCTGGTGCAGGGCATCCGCTGCAGCCACCGTGACGAGGACCGCGCACGCCTGCTGGTGGACTCCATCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 90 bp GCCTGCACCACTCCTGGATGGCGCTGGCAGACAGCGGGCCCTGGATaGTCCCGTCGCGCCGCAGAAACACCTCCCCCTGGTCTGTCTGGT +
Preference number: 5 (lower is better)
Translates to: ACTTPGWRWQTAGPG*SRRAAETPPPGLSG
Trigger: ACCAGACAGACCAGGGGGAGGTGTTTCTGCGGCGCGACGGGAGCATCCAGGGCCCGCTGTCTGCCAGCGCCATCCAGGAGTGGTGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS CCA 90 bp CCCGGCTCCTATGACCTTCATGTCCTGGTGGCTCCCGCGGGAGCATaGGAGGTGCCTGCCCTGAGCTCCCATAGCCTCCCGACCCCTGGC +
Preference number: 5 (lower is better)
Translates to: PGSYDLHVLVAPAGA*EVPALSSHSLPTPG
Trigger: GCCAGGGGTCGGGAGGCTATGGGAGCTCAGGGCAGGCACCTCCCATGCTCCCGCGGGAGCCACCAGGACATGAAGGTCATAGGAGCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302946.12
CDS CCA 90 bp CTCTGCCTGCACCACTCCTGGATGGCGCTGGCAGACAGCGGGCCCTaGATGCTCCCGTCGCGCCGCAGAAACACCTCCCCCTGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: LCLHHSWMALADSGP*MLPSRRRNTSPWSV
Trigger: GACAGACCAGGGGGAGGTGTTTCTGCGGCGCGACGGGAGCATCCAGGGCCCGCTGTCTGCCAGCGCCATCCAGGAGTGGTGCAGGCAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS CCA 90 bp CCAGCTCCACCAGCCACCTCTGCCTGCACCACTCCTGGATGGCGCTaGCAGACAGCGGGCCCTGGATGCTCCCGTCGCGCCGCAGAAACA +
Preference number: 5 (lower is better)
Translates to: PAPPATSACTTPGWR*QTAGPGCSRRAAET
Trigger: TGTTTCTGCGGCGCGACGGGAGCATCCAGGGCCCGCTGTCTGCCAGCGCCATCCAGGAGTGGTGCAGGCAGAGGTGGCTGGTGGAGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CAA 90 bp ATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCTCCCCAGGGCCCGCCGCACGTGGTGCTaGAAGGCCAGGCTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: IPGSQVESAVPSCLLPRARRTWC*KARLRY
Trigger: GTACCTCAGCCTGGCCTTCAAGCACCACGTGCGGCG...GGCCCTGGGGAGCAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS TCA 90 bp TTCATGTCCTGGTGGCTCCCGCGGGAGCATGGGAGGTGCCTGCCCTaGGCTCCCATAGCCTCCCGACCCCTGGCCGGTAGCTCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: FMSWWLPREHGRCLP*APIASRPLAGSSQG
Trigger: TCCCTGAGAGCTACCGGCCAGGGGTCGGGAGGCTATGGGAGCTCAGGGCAGGCACCTCCCATGCTCCCGCGGGAGCCACCAGGACATGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 90 bp TGCGCCGAGGGAGCCTCCTCGAGGTCAGAGTACTCCGTCAGGGACTaGTCTGCGGGTAGCTCCGGCAGGGACTCCTCACCCCAGGACTCC +
Preference number: 5 (lower is better)
Translates to: CAEGASSRSEYSVRD*SAGSSGRDSSPQDS
Trigger: GGAGTCCTGGGGTGAGGAGTCCCTGCCGGAGCTACCCGCAGAGCAGTCCCTGACGGAGTACTCTGACCTCGAGGAGGCTCCCTCGGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 90 bp TGGCAGTGCGAGGCTCTGGGGAGAGTGCATTCGGTGCCCTCTCCTTaGCCGCCCGGGCAGCAGCCAGGTTGGGCTCGGCTTTGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: WQCEALGRVHSVPSP*PPGQQPGWARLCVH
Trigger: GTGGACACAAAGCCGAGCCCAACCTGGCTGCTGCCCGGGCGGGCAAGGAGAGGGCACCGAATGCACTCTCCCCAGAGCCTCGCACTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CCA 90 bp CCCAGGAAGGCACCCTGGAAGAGCTGGTCCTTGCCCACGATCTGCTaGTGCACAATGGCACTGTCGGAGCACACGCCGCTGGGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: PRKAPWKSWSLPTIC*CTMALSEHTPLGRP
Trigger: GGGCCGGCCCAGCGGCGTGTGCTCCGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS CCA 90 bp GGAGAGGCCTATGACCTTCATGTCCTGGTGGCTCCCGCGGGAGCATaGGAGGTGCCTGCCCTGAGCTCCCATAGCCTCCCGACCCCTGGC +
Preference number: 5 (lower is better)
Translates to: GEAYDLHVLVAPAGA*EVPALSSHSLPTPG
Trigger: GCCAGGGGTCGGGAGGCTATGGGAGCTCAGGGCAGGCACCTCCCATGCTCCCGCGGGAGCCACCAGGACATGAAGGTCATAGGCCTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS CCA 90 bp GTGGGAAGACGGGATCTTCATGTCCTGGTGGCTCCCGCGGGAGCATaGGAGGTGCCTGCCCTGAGCTCCCATAGCCTCCCGACCCCTGGC +
Preference number: 5 (lower is better)
Translates to: VGRRDLHVLVAPAGA*EVPALSSHSLPTPG
Trigger: GCCAGGGGTCGGGAGGCTATGGGAGCTCAGGGCAGGCACCTCCCATGCTCCCGCGGGAGCCACCAGGACATGAAGATCCCGTCTTCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372611.5
CDS GCA 90 bp GGGGAGGGAGGCCAGGGTGTCCCTGTGGACAGTCACCTGCACCAGTaGATAGGCCTTCCGCGGCCGCCTCACCACTTCAATGTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: GEGGQGVPVDSHLHQ*IGLPRPPHHFNVLP
Trigger: CGGGAGCACATTGAAGTGGTGAGGCGGCCGCGGAAGGCCTATGCACTGGTGCAGGTGACTGTCCACAGGGACACCCTGGCCTCCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 90 bp AATAGCAGGTCCTTCCCACGGGCTGCCAGCTCCTTGAGGATTAGGTaGTCCTCCAGGGCCGTCTGCAGGCGCCAGGGGAGGGAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: NSRSFPRAASSLRIR*SSRAVCRRQGREAR
Trigger: CCTGGCCTCCCTCCCCTGGCGCCTGCAGACGGCCCTGGAGGAGCACCTAATCCTCAAGGAGCTGGCAGCCCGTGGGAAGGACCTGCTATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 90 bp AGGAAGGCACCCTGGAAGAGCTGGTCCTTGCCCACGATCTGCTGGTaGACAATGGCACTGTCGGAGCACACGCCGCTGGGCCGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: RKAPWKSWSLPTICW*TMALSEHTPLGRPW
Trigger: CCAGGGCCGGCCCAGCGGCGTGTGCTCCGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 90 bp CTGCCCAGGAAGGCACCCTGGAAGAGCTGGTCCTTGCCCACGATCTaGTGGTGCACAATGGCACTGTCGGAGCACACGCCGCTGGGCCGG +
Preference number: 5 (lower is better)
Translates to: LPRKAPWKSWSLPTI*WCTMALSEHTPLGR
Trigger: CCGGCCCAGCGGCGTGTGCTCCGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCTGGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 90 bp GATCTGAGGCTTGAAGCCCTGCAGGATGGAGTCCACCAGCAGGCGTaGGCGGTCCTCGTCACGGTGGCTGCAGCGGATGCCCTGCACCAG +
Preference number: 5 (lower is better)
Translates to: DLRLEALQDGVHQQA*AVLVTVAAADALHQ
Trigger: CTGGTGCAGGGCATCCGCTGCAGCCACCGTGACGAGGACCGCGCACGCCTGCTGGTGGACTCCATCCTGCAGGGCTTCAAGCCTCAGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS CCA 90 bp CACCCTGGAAGAGCTGGTCCTTGCCCACGATCTGCTGGTGCACAATaGCACTGTCGGAGCACACGCCGCTGGGCCGGCCCTGGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: HPGRAGPCPRSAGAQ*HCRSTRRWAGPGSS
Trigger: AGAGCTGCCAGGGCCGGCCCAGCGGCGTGTGCTCCGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS TCA 90 bp GGGCCTCACTCAATAGCAGGTCCTTCCCACGGGCTGCCAGCTCCTTaGGGATTAGGTGCTCCTCCAGGGCCGTCTGCAGGCGCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: GPHSIAGPSHGLPAP*GLGAPPGPSAGARG
Trigger: TCCCCTGGCGCCTGCAGACGGCCCTGGAGGAGCACCTAATCCTCAAGGAGCTGGCAGCCCGTGGGAAGGACCTGCTATTGAGTGAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS TCA 90 bp CAGCCGCTCCAGGGTGTCTCGCAGCAGGCAGGCAAGCACCGGCACTaGGAACTGGGGGTTCAGATGGCCCACATAGAGAGTGTGCGCCGA +
Preference number: 5 (lower is better)
Translates to: QPLQGVSQQAGKHRH*ELGVQMAHIESVRR
Trigger: TCGGCGCACACTCTCTATGTGGGCCATCTGAACCCCCAGTTCTCAGTGCCGGTGCTTGCCTGCCTGCTGCGAGACACCCTGGAGCGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 90 bp TGCGGGTCTCGCTGCCCAGGAAGGCACCCTGGAAGAGCTGGTCCTTaGCCACGATCTGCTGGTGCACAATGGCACTGTCGGAGCACACGC +
Preference number: 5 (lower is better)
Translates to: CGSRCPGRHPGRAGP*PRSAGAQWHCRSTR
Trigger: GCGTGTGCTCCGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCTGGGCAGCGAGACCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS CCA 90 bp TCCTCCTCCTCCTCCTCCTTCTCCTCTCTGTGGCTGAAGGGCCCTTaGGCCTCACTCAATAGCAGGTCCTTCCCACGGGCTGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SSSSSSFSSLWLKGP*ASLNSRSFPRAASS
Trigger: GGAGCTGGCAGCCCGTGGGAAGGACCTGCTATTGAGTGAGGCCCAAGGGCCCTTCAGCCACAGAGAGGAGAAGGAGGAGGAGGAGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCCGCCGCACGTGGTGCTaGAAGGCCAGGCTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVARRTWC*KARLRY
Trigger: GTACCTCAGCCTGGCCTTCAAGCACCACGTGCGGCG...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS TCA 90 bp TCAGGCCACTGTCCTCCTCCTCCTCCTCCTTCTCCTCTCTGTGGCTaGAGGGCCCTTGGGCCTCACTCAATAGCAGGTCCTTCCCACGGG +
Preference number: 5 (lower is better)
Translates to: SGHCPPPPPPSPLCG*RALGPHSIAGPSHG
Trigger: CCCGTGGGAAGGACCTGCTATTGAGTGAGGCCCAAGGGCCCTTCAGCCACAGAGAGGAGAAGGAGGAGGAGGAGGAGGACAGTGGCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS CCA 90 bp GCTCCCATAGCCTCCCGACCCCTGGCCGGTAGCTCTCAGGGAACTTaGAGGCTTGGCACAGGGACGGCCAGAACCAGGGTTATAGGAAGT +
Preference number: 5 (lower is better)
Translates to: APIASRPLAGSSQGT*RLGTGTARTRVIGS
Trigger: ACTTCCTATAACCCTGGTTCTGGCCGTCCCTGTGCCAAGCCTCCAAGTTCCCTGAGAGCTACCGGCCAGGGGTCGGGAGGCTATGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCCGGGCTGCCAGCTCCTaGAGGATTAGGTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVARAASS*RIRCSS
Trigger: GGAGGAGCACCTAATCCTCAAGGAGCTGGCAGCCCG...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 90 bp GGGTCCCACCACACACTGGAAGCAGACCCAGCGGCCCACCCACCATaGAGCTTGGCTGTGGGACACACTTCCCCACTTAGTGATGTCTCT +
Preference number: 5 (lower is better)
Translates to: GSHHTLEADPAAHPP*SLAVGHTSPLSDVS
Trigger: AGAGACATCACTAAGTGGGGAAGTGTGTCCCACAGCCAAGCTGCATGGTGGGTGGGCCGCTGGGTCTGCTTCCAGTGTGTGGTGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CCA 90 bp TCCATATTGCGGGTCTCGCTGCCCAGGAAGGCACCCTGGAAGAGCTaGTCCTTGCCCACGATCTGCTGGTGCACAATGGCACTGTCGGAG +
Preference number: 5 (lower is better)
Translates to: SILRVSLPRKAPWKS*SLPTICWCTMALSE
Trigger: CTCCGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCTGGGCAGCGAGACCCGCAATATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCGCTTGAACTCCATATaGCGGGTCTCGCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLRLNSI*RVSLPR
Trigger: CCTGGGCAGCGAGACCCGCAATATGGAGTTCAAGCG...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCGCCGCACGTGGTGCTaGAAGGCCAGGCTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVRRTWC*KARLRY
Trigger: GTACCTCAGCCTGGCCTTCAAGCACCACGTGCGGCG...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCGCCGCACGTGGTGCTaGAAGGCCAGGCTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRRRTWC*KARLRY
Trigger: GTACCTCAGCCTGGCCTTCAAGCACCACGTGCGGCG...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCGTCAGGCGGATCACCTaGAGGGGGACGCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVVRRIT*RGTLVS
Trigger: GGAGACCAGCGTCCCCCTCAAGGTGATCCGCCTGAC...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CAA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATTTCGGTGCCCTCTCCTaGCCCGCCCGGGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: AESSFLATQMGLSGLKPHFGALS*PARAAA
Trigger: GGCTGCTGCCCGGGCGGGCAAGGAGAGGGCACCGAA...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTCCACCAGCCACCTCTaGAGGGGGACGCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGSTSHL*RGTLVS
Trigger: GGAGACCAGCGTCCCCCTCAAGAGGTGGCTGGTGGA...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372613.6
CDS TCA 90 bp TCCCGGCTCCTGAGGCCTAGGATGAGAAAGCAGAGTCACGTGGACTaGGCAAGACACAGGGCCTGTGGGAAGACGGGATCCAGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: SRLLRPRMRKQSHVD*ARHRACGKTGSSLH
Trigger: ATGCAGGCTGGATCCCGTCTTCCCACAGGCCCTGTGTCTTGCTCAGTCCACGTGACTCTGCTTTCTCATCCTAGGCCTCAGGAGCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439569.2
CDS CCA 90 bp CGCTTGAACTCCATATTGCGGGTCTCGCTGCCCAGGAAGGCACCCTaGAAGAGCTGGTCCTTGCCCACGATCTGCTGGTGCACAATGGCA +
Preference number: 5 (lower is better)
Translates to: RLNSILRVSLPRKAP*KSWSLPTICWCTMA
Trigger: TGCCATTGTGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCTGGGCAGCGAGACCCGCAATATGGAGTTCAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS CCA 90 bp CGCTTGAACTCCATATTGCGGGTCTCGCTGCCCAGGAAGGCACCCTaGAAGAGCTGGTCCTTGCCCACGATCTGCTCTCTGTGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RLNSILRVSLPRKAP*KSWSLPTICSLWLK
Trigger: CTTCAGCCACAGAGAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCTGGGCAGCGAGACCCGCAATATGGAGTTCAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372611.5
CDS-3UTR CAA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGCGGGCTGCCAGCTCCTaGAGGATTAGGTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGRAASS*RIRCSS
Trigger: GGAGGAGCACCTAATCCTCAAGGAGCTGGCAGCCCG...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTCGCTTGAACTCCATATaGCGGGTCTCGCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASRLNSI*RVSLPR
Trigger: CCTGGGCAGCGAGACCCGCAATATGGAGTTCAAGCG...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCGTCAGGCGGATCACCTaGAGGGGGACGCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LQGGLLPCNHSHQICLAIVRRIT*RGTLVS
Trigger: GGAGACCAGCGTCCCCCTCAAGGTGATCCGCCTGAC...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CAA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCATGGGTCTGTCAGGGTaGAAGCCACATGGGTGCCTG +
Preference number: 5 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVAMGLSG*KPHGCL
Trigger: CAGGCACCCATGTGGCTTCAACCCTGACAGACCCAT...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCTGGCTGGTGGCCCCATaGCAGCTTCTCTGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVWLVAP*QLLCLL
Trigger: GAGCAGGCAGAGAAGCTGCAATGGGGCCACCAGCCA...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS GCA 90 bp CCAGTGCTCATCATTCTGCAGAAGGCTGGCAGCGCTTGCCCACACTaGTTCTGGAAGCCCCAATTGGGGGCAGTAAGGATGGTGCCACAG +
Preference number: 5 (lower is better)
Translates to: PVLIILQKAGSACPH*FWKPQLGAVRMVPQ
Trigger: CTGTGGCACCATCCTTACTGCCCCCAATTGGGGCTTCCAGAAGCAGTGTGGGCAAGCGCTGCCAGCCTTCTGCAGAATGATGAGCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CCA 90 bp ATGGGAAGGCTCTCCCTGGGAAGGGGTTCCAGGATTCCTCACTGCTaGCTGCTTCTCCCAGGGTCTGTGTTCTCAGTGTGGCTTAAGGGC +
Preference number: 5 (lower is better)
Translates to: MGRLSLGRGSRIPHC*LLLPGSVFSVWLKG
Trigger: GCCCTTAAGCCACACTGAGAACACAGACCCTGGGAGAAGCAGCCAGCAGTGAGGAATCCTGGAACCCCTTCCCAGGGAGAGCCTTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp AATGGAGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGCGCTTGAACTCCATATaGCGGGTCTCGCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: NGALTVTSSSKSGVGAAGRLNSI*RVSLPR
Trigger: CCTGGGCAGCGAGACCCGCAATATGGAGTTCAAGCG...CCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCTCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGGTCAGGCGGATCACCTaGAGGGGGACGCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: TDSFLALCSQLESQTSAWVRRIT*RGTLVS
Trigger: GGAGACCAGCGTCCCCCTCAAGGTGATCCGCCTGAC...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CAA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTTGCTCATGTGCCATGTaGAAGGAGTCCCTGTCCGCC +
Preference number: 5 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASCSCAM*KESLSA
Trigger: GGCGGACAGGGACTCCTTCAACATGGCACATGAGCA...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGTCTCAAATGGAATCCTaGAGGCAGTTGGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLSQMES*RQLAWG
Trigger: CCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGA...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTTGGGAGGTACACAGATaGGCAGAGACTGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRWEVHR*AETGQG
Trigger: GCCCTGCCCAGTCTCTGCCAATCTGTGTACCTCCCA...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CAA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTTGGAAGAGCTGGTCCTaGCCCACGATCTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASWKSWS*PTICSL
Trigger: CAGAGAGCAGATCGTGGGCAAGGACCAGCTCTTCCA...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372611.5
CDS TCA 90 bp GCCACCCACCTGAGGCCTAGGATGAGAAAGCAGAGTCACGTGGACTaGGCAAGACACAGGGCCTGTGGGAAGACGGGATCTGCCCAAAAA +
Preference number: 5 (lower is better)
Translates to: ATHLRPRMRKQSHVD*ARHRACGKTGSAQK
Trigger: TTTTTGGGCAGATCCCGTCTTCCCACAGGCCCTGTGTCTTGCTCAGTCCACGTGACTCTGCTTTCTCATCCTAGGCCTCAGGTGGGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS TCA 90 bp TCCCGGCTCCTGAGGCCTAGGATGAGAAAGCAGAGTCACGTGGACTaGGCAAGACACAGGGCCTGTGGGAAGACGGGATCTTCATGTCCT +
Preference number: 5 (lower is better)
Translates to: SRLLRPRMRKQSHVD*ARHRACGKTGSSCP
Trigger: AGGACATGAAGATCCCGTCTTCCCACAGGCCCTGTGTCTTGCTCAGTCCACGTGACTCTGCTTTCTCATCCTAGGCCTCAGGAGCCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372611.5
CDS GCA 90 bp GACTCCTCACCCCAGGACTCCATGAAGGGCTCTGACACCTGTGTTTaGACTGATCTCTTCATGGGGGTCATGGGAAGGCTCTCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: DSSPQDSMKGSDTCV*TDLFMGVMGRLSLG
Trigger: TCCCAGGGAGAGCCTTCCCATGACCCCCATGAAGAGATCAGTGCAAACACAGGTGTCAGAGCCCTTCATGGAGTCCTGGGGTGAGGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 90 bp GGCCTCCTAGGTACCCTCAGGGTTTCCTGCCTACCAGTTCACTCCTaGCTCCAGGCAACAGAGAAAACCTTTACACAGGGCCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: GLLGTLRVSCLPVHS*LQATEKTFTQGLLE
Trigger: CTCCAGGAGGCCCTGTGTAAAGGTTTTCTCTGTTGCCTGGAGGCAGGAGTGAACTGGTAGGCAGGAAACCCTGAGGGTACCTAGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS CCA 90 bp GTGTTTGCACTGATCTCTTCATGGGGGTCATGGGAAGGCTCTCCCTaGGAAGGGGTTCCAGGATTCCTCACTGCTGGCTGCTTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: VFALISSWGSWEGSP*EGVPGFLTAGCFSQ
Trigger: CTGGGAGAAGCAGCCAGCAGTGAGGAATCCTGGAACCCCTTCCCAGGGAGAGCCTTCCCATGACCCCCATGAAGAGATCAGTGCAAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGCGGGCTGCCAGCTCCTaGAGGATTAGGTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TDSFLALCSQLESQTSAWRAASS*RIRCSS
Trigger: GGAGGAGCACCTAATCCTCAAGGAGCTGGCAGCCCG...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTCGCCGCTACCCCGCTaGAACTCCATATTGCGGGTC +
Preference number: 5 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGSPLPR*NSILRV
Trigger: GACCCGCAATATGGAGTTCAAGCGGGGTAGCGGCGA...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTCGCCGCTACCCCGCTaGAACTCCATATTGCGGGTC +
Preference number: 5 (lower is better)
Translates to: LQGGLLPCNHSHQICLAISPLPR*NSILRV
Trigger: GACCCGCAATATGGAGTTCAAGCGGGGTAGCGGCGA...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGCGCCGCACGTGGTGCTaGAAGGCCAGGCTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: RVASCPVTTVIKYASPSLRRTWC*KARLRY
Trigger: GTACCTCAGCCTGGCCTTCAAGCACCACGTGCGGCG...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATGTCAGGCGGATCACCTaGAGGGGGACGCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: AESSFLATQMGLSGLKPHVRRIT*RGTLVS
Trigger: GGAGACCAGCGTCCCCCTCAAGGTGATCCGCCTGAC...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS-3UTR CAA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCTGCTCATGTGCCATGTaGAAGGAGTCCCTGTCCGCC +
Preference number: 5 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVCSCAM*KESLSA
Trigger: GGCGGACAGGGACTCCTTCAACATGGCACATGAGCA...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTATGGGTCTGTCAGGGTaGAAGCCACATGGGTGCCTG +
Preference number: 5 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRMGLSG*KPHGCL
Trigger: CAGGCACCCATGTGGCTTCAACCCTGACAGACCCAT...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS TCA 90 bp ACCTCCCTCTTTAGTCAGTCACCAATCCCAGGCTCTACTGAGTACTaGCAGGGCCCAGCTGCTCCCAAGATGGAGCAGGAGGCACATGGT +
Preference number: 5 (lower is better)
Translates to: TSLFSQSPIPGSTEY*QGPAAPKMEQEAHG
Trigger: ACCATGTGCCTCCTGCTCCATCTTGGGAGCAGCTGGGCCCTGTCAGTACTCAGTAGAGCCTGGGATTGGTGACTGACTAAAGAGGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS GCA 90 bp CCAGTTCCCATGCAGGTCACCTCTTGCCACCTCTTTCAGCGCTGCTaGCTAAAGCCTCCACCTCCCTCTTTAGTCAGTCACCAATCCCAG +
Preference number: 5 (lower is better)
Translates to: PVPMQVTSCHLFQRC*LKPPPPSLVSHQSQ
Trigger: CTGGGATTGGTGACTGACTAAAGAGGGAGGTGGAGGCTTTAGGCAGCAGCGCTGAAAGAGGTGGCAAGAGGTGACCTGCATGGGAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGCGGGCTGCCAGCTCCTaGAGGATTAGGTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RVASCPVTTVIKYASPSLRAASS*RIRCSS
Trigger: GGAGGAGCACCTAATCCTCAAGGAGCTGGCAGCCCG...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGTGGAAGAGCTGGTCCTaGCCCACGATCTGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: TDSFLALCSQLESQTSAWWKSWS*PTICWC
Trigger: GCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCCA...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGTCGCCGCTACCCCGCTaGAACTCCATATTGCGGGTC +
Preference number: 5 (lower is better)
Translates to: TDSFLALCSQLESQTSAWSPLPR*NSILRV
Trigger: GACCCGCAATATGGAGTTCAAGCGGGGTAGCGGCGA...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCCATGGGCTTTACTGGTaGGCCTTACACTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVAHGLYW*ALHSNR
Trigger: CCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCATG...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGCATGGGCTTTACTGGTaGGCCTTACACTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLHGLYW*ALHSNR
Trigger: CCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCATG...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTGCTCATGTGCCATGTaGAAGGAGTCCCTGTCCGCC +
Preference number: 5 (lower is better)
Translates to: LQGGLLPCNHSHQICLAICSCAM*KESLSA
Trigger: GGCGGACAGGGACTCCTTCAACATGGCACATGAGCA...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTCATGCAGGTCACCTCTaGCCACCTCTTTCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGHAGHL*PPLSAL
Trigger: CAGCGCTGAAAGAGGTGGCAAGAGGTGACCTGCATG...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp TTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTCTCTGAGTCCTCCATTTTaGGTCCAGAGAGCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: FDSHKFQQVRGGGCRVASLSPPF*VQRAEV
Trigger: GACCTCTGCTCTCTGGACCAAAAATGGAGGACTCAG...AGAGGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS TCA 90 bp ACTGCTCCCCACACACCCAGCCTGCATCTTCTCAAATGGAATCCTTaGGGCAGTTGGCCTGGGGGCATTCAGGTCAAACAGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: TAPHTPSLHLLKWNP*GSWPGGIQVKQEEE
Trigger: CTCCTCTTCCTGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGAAGATGCAGGCTGGGTGTGTGGGGAGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS GCA 90 bp ACACACAGTCTTTATCAGCACAGGACTGACCAGTGCTCATCATTCTaGAGAAGGCTGGCAGCGCTTGCCCACACTGCTTCTGGAAGCCCC +
Preference number: 5 (lower is better)
Translates to: THSLYQHRTDQCSSF*RRLAALAHTASGSP
Trigger: GGGGCTTCCAGAAGCAGTGTGGGCAAGCGCTGCCAGCCTTCTGCAGAATGATGAGCACTGGTCAGTCCTGTGCTGATAAAGACTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CCA 90 bp ACCCAGCCTGCATCTTCTCAAATGGAATCCTTGAGGCAGTTGGCCTaGGGGCATTCAGGTCAAACAGGAAGAGGAGGAGAGGAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: TQPASSQMESLRQLA*GHSGQTGRGGEERP
Trigger: AGGCCTCTCCTCTCCTCCTCTTCCTGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGAAGATGCAGGCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS-3UTR CAA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTTATGCCTCGCCATCTTaGAGGGGCTTTCCTGAGATG +
Preference number: 5 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCRYASPS*RGFPEM
Trigger: CATCTCAGGAAAGCCCCTCAAAGATGGCGAGGCATA...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGAGGGAACTTGGAGGCTaGGCACAGGGACGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: RVASCPVTTVIKYASPSLRELGG*AQGRPE
Trigger: TTCTGGCCGTCCCTGTGCCAAGCCTCCAAGTTCCCT...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCATGGCTGGTGGCCCCATaGCAGCTTCTCTGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: EMTDSFLALCSQLESQTSWLVAP*QLLCLL
Trigger: GAGCAGGCAGAGAAGCTGCAATGGGGCCACCAGCCA...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS TCA 90 bp TGTGGGAAGACGGGATCCAGCCTGCATCTTCTCAAATGGAATCCTTaGGGCAGTTGGCCTGGGGGCATTCAGGTCAAACAGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: CGKTGSSLHLLKWNP*GSWPGGIQVKQEEE
Trigger: CTCCTCTTCCTGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGAAGATGCAGGCTGGATCCCGTCTTCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439569.2
CDS CCA 90 bp ATCCAGCCTGCATCTTCTCAAATGGAATCCTTGAGGCAGTTGGCCTaGGGGCATTCAGGTCAAACAGGAAGAGGAGGAGAGGAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: IQPASSQMESLRQLA*GHSGQTGRGGEERP
Trigger: AGGCCTCTCCTCTCCTCCTCTTCCTGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGAAGATGCAGGCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439569.2
CDS-3UTR CAA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACGCTTGAACTCCATATaGCGGGTCTCGCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GFPEMTDSFLALCSQLESRLNSI*RVSLPR
Trigger: CCTGGGCAGCGAGACCCGCAATATGGAGTTCAAGCG...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCATCGCCGCTACCCCGCTaGAACTCCATATTGCGGGTC +
Preference number: 5 (lower is better)
Translates to: EMTDSFLALCSQLESQTSSPLPR*NSILRV
Trigger: GACCCGCAATATGGAGTTCAAGCGGGGTAGCGGCGA...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGTGCTCATGTGCCATGTaGAAGGAGTCCCTGTCCGCC +
Preference number: 5 (lower is better)
Translates to: RVASCPVTTVIKYASPSLCSCAM*KESLSA
Trigger: GGCGGACAGGGACTCCTTCAACATGGCACATGAGCA...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATTGCTCATGTGCCATGTaGAAGGAGTCCCTGTCCGCC +
Preference number: 5 (lower is better)
Translates to: AESSFLATQMGLSGLKPHCSCAM*KESLSA
Trigger: GGCGGACAGGGACTCCTTCAACATGGCACATGAGCA...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGATGGGTCTGTCAGGGTaGAAGCCACATGGGTGCCTG +
Preference number: 5 (lower is better)
Translates to: RVASCPVTTVIKYASPSLMGLSG*KPHGCL
Trigger: CAGGCACCCATGTGGCTTCAACCCTGACAGACCCAT...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTATGCCTCGCCATCTTaGAGGGGCTTTCCTGAGATG +
Preference number: 5 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGYASPS*RGFPEM
Trigger: CATCTCAGGAAAGCCCCTCAAAGATGGCGAGGCATA...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGCTGCAGGGTGGCCTCTaGCCCTGTAACCACAGTCAT +
Preference number: 5 (lower is better)
Translates to: RVASCPVTTVIKYASPSLLQGGL*PCNHSH
Trigger: ATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGCTGCAGGGTGGCCTCTaGCCCTGTAACCACAGTCAT +
Preference number: 5 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVELQGGL*PCNHSH
Trigger: ATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGAAGGCTGGCAGCGCTaGCCCACACTGCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: EMTDSFLALCSQLESQTSEGWQR*PTLLLE
Trigger: TTCCAGAAGCAGTGTGGGCAAGCGCTGCCAGCCTTC...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACACCCACCATGCAGCTaGGCTGTGGGACACACTTCC +
Preference number: 5 (lower is better)
Translates to: GFPEMTDSFLALCSQLESHPPCS*AVGHTS
Trigger: GGAAGTGTGTCCCACAGCCAAGCTGCATGGTGGGTG...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGTCTCAAATGGAATCCTaGAGGCAGTTGGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: TDSFLALCSQLESQTSAWSQMES*RQLAWG
Trigger: CCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGA...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp CTGCAGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCCTGAGTCCTCCATTTTaGGTCCAGAGAGCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: LQGGLLPCNHSHQICLAILSPPF*VQRAEV
Trigger: GACCTCTGCTCTCTGGACCAAAAATGGAGGACTCAG...GATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS TCA 90 bp AGAAACCAAGACGTGGGTGACACACAGTCTTTATCAGCACAGGACTaGCCAGTGCTCATCATTCTGCAGAAGGCTGGCAGCGCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: RNQDVGDTQSLSAQD*PVLIILQKAGSACP
Trigger: TGGGCAAGCGCTGCCAGCCTTCTGCAGAATGATGAGCACTGGTCAGTCCTGTGCTGATAAAGACTGTGTGTCACCCACGTCTTGGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAATGGGTCTGTCAGGGTaGAAGCCACATGGGTGCCTG +
Preference number: 5 (lower is better)
Translates to: EMTDSFLALCSQLESQTSMGLSG*KPHGCL
Trigger: CAGGCACCCATGTGGCTTCAACCCTGACAGACCCAT...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp ACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCAGCCTGGTATGCCTCGCCATCTTaGAGGGGCTTTCCTGAGATG +
Preference number: 5 (lower is better)
Translates to: TDSFLALCSQLESQTSAWYASPS*RGFPEM
Trigger: CATCTCAGGAAAGCCCCTCAAAGATGGCGAGGCATA...CCAGGCTGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp GCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTGAGGCTATAGCTGTTTaGAGATGGCCAACTCAAGTC +
Preference number: 5 (lower is better)
Translates to: ALHSNRKSLGLRWRVPCREAIAV*RWPTQV
Trigger: GACTTGAGTTGGCCATCTCAAAACAGCTATAGCCTC...ACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATTCTCAAATGGAATCCTaGAGGCAGTTGGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: AESSFLATQMGLSGLKPHSQMES*RQLAWG
Trigger: CCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGA...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGTCGCCGCTACCCCGCTaGAACTCCATATTGCGGGTC +
Preference number: 5 (lower is better)
Translates to: QMSILGRRTIPYSLALGESPLPR*NSILRV
Trigger: GACCCGCAATATGGAGTTCAAGCGGGGTAGCGGCGA...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGGCTGAGAGCAGTTTCTaGGCTACACAGATGGGTCTG +
Preference number: 5 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEAESSF*ATQMGL
Trigger: CAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp GCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTTGAAGCCACATTATGCCTCGCCATCTTaGAGGGGCTTTCCTGAGATG +
Preference number: 5 (lower is better)
Translates to: AESSFLATQMGLSGLKPHYASPS*RGFPEM
Trigger: CATCTCAGGAAAGCCCCTCAAAGATGGCGAGGCATA...ATGTGGCTTCAACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp AGGGTGGCCTCTTGCCCTGTAACCACAGTCATCAAATATGCCTCGCCATCTTTGTATGCCTCGCCATCTTaGAGGGGCTTTCCTGAGATG +
Preference number: 5 (lower is better)
Translates to: RVASCPVTTVIKYASPSLYASPS*RGFPEM
Trigger: CATCTCAGGAAAGCCCCTCAAAGATGGCGAGGCATA...CAAAGATGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp AGCTTTGACAGTCACAAGTTCCAGCAAGTCAGGGGTGGGGGCTGCAGGGTGGCCTTTATTAATGGAGCTTaGACAGTCACAAGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SFDSHKFQQVRGGGCRVAFINGA*TVTSSS
Trigger: GCTGGAACTTGTGACTGTCAAAGCTCCATTAATAAA...GGCCACCCTGCAGCCCCCACCCCTGACTTGCTGGAACTTGTGACTGTCAAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp CTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCCTGCCTGTTTATTAATGGAGCTTaGACAGTCACAAGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: LKQEIPGSQVESAVPSCLFINGA*TVTSSS
Trigger: GCTGGAACTTGTGACTGTCAAAGCTCCATTAATAAA...CAGGCAGGACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp CCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCGTCTTTGGGAAGATGAGGTaGTTACCTGCTGTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: PYTQTGNPWVSGGECRAVFGKMR*LPAVGE
Trigger: TTCTCCAACAGCAGGTAACAACCTCATCTTCCCAAA...GACGGCACGGCACTCTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS TCA 90 bp AGTCGTGTTGAACTGTGCAGAAATAGCTGTCCGGGAGAAGCACCTTaGCAGACGAAACACCTGAACATGACCAGAGGCGTTCTCCCTACT +
Preference number: 5 (lower is better)
Translates to: SRVELCRNSCPGEAP*QTKHLNMTRGVLPT
Trigger: AGTAGGGAGAACGCCTCTGGTCATGTTCAGGTGTTTCGTCTGTCAAGGTGCTTCTCCCGGACAGCTATTTCTGCACAGTTCAACACGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGCATGGGCTTTACTGGTaGGCCTTACACTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEHGLYW*ALHSNR
Trigger: CCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCATG...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCAGCTGAGAGCAGTTTCTaGGCTACACAGATGGGTCTG +
Preference number: 5 (lower is better)
Translates to: GFPEMTDSFLALCSQLESAESSF*ATQMGL
Trigger: CAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGC...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGCTGCAGGGTGGCCTCTaGCCCTGTAACCACAGTCAT +
Preference number: 5 (lower is better)
Translates to: QMSILGRRTIPYSLALGELQGGL*PCNHSH
Trigger: ATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp TTGGGGACAGGGCTGAGAGCAGTTTCTTGGCTACACAGATGGGTCTGTCAGGGTATTTCCCAAATTGACTaGAGTGCAGCAACTTTCCCC +
Preference number: 5 (lower is better)
Translates to: LGTGLRAVSWLHRWVCQGISQID*SAATFP
Trigger: GGGGAAAGTTGCTGCACTCAAGTCAATTTGGGAAAT...ACCCTGACAGACCCATCTGTGTAGCCAAGAAACTGCTCTCAGCCCTGTCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGACTTACCTAGAGGCCTaGCTATTGGGTGGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVETYLEA*LLGGCS
Trigger: AGAACAGCCACCCAATAGCAAGGCCTCTAGGTAAGT...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp GAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCACAGACCTCATCCGGGAGAAGCACCTaGACAGACGAAACACCTGAA +
Preference number: 5 (lower is better)
Translates to: EMTDSFLALCSQLESQTSSGRST*TDETPE
Trigger: TTCAGGTGTTTCGTCTGTCAAGGTGCTTCTCCCGGA...TGAGGTCTGTGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTTGGGAGGTACACAGATaGGCAGAGACTGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSWEVHR*AETGQG
Trigger: GCCCTGCCCAGTCTCTGCCAATCTGTGTACCTCCCA...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS TCA 90 bp AAGCCTTTCTTGCCTCTGTCATCCATGAGGTGCCCTCACAGCAACTaGGGCTATAGCTGTTTTGAGATGGCCAACTCAAGTCGTGTTGAA +
Preference number: 5 (lower is better)
Translates to: KPFLPLSSMRCPHSN*GYSCFEMANSSRVE
Trigger: TTCAACACGACTTGAGTTGGCCATCTCAAAACAGCTATAGCCTCAGTTGCTGTGAGGGCACCTCATGGATGACAGAGGCAAGAAAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTCTGCAGGGTGGCCTCTaGCCCTGTAACCACAGTCAT +
Preference number: 5 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSLQGGL*PCNHSH
Trigger: ATGACTGTGGTTACAGGGCAAGAGGCCACCCTGCAG...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGCCAACTCAAGTCGTGTaGAACTGTGCAGAAATAGCT +
Preference number: 5 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEPTQVV*NCAEIA
Trigger: AGCTATTTCTGCACAGTTCAACACGACTTGAGTTGG...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGTCCCTCAAGCCTTTCTaGCCTCTGTCATCCATGAGG +
Preference number: 5 (lower is better)
Translates to: QMSILGRRTIPYSLALGESLKPF*PLSSMR
Trigger: CCTCATGGATGACAGAGGCAAGAAAGGCTTGAGGGA...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGCATGGGCTTTACTGGTaGGCCTTACACTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: QMSILGRRTIPYSLALGEHGLYW*ALHSNR
Trigger: CCTGTTTGAGTGTAAGGCCAACCAGTAAAGCCCATG...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS TCA 90 bp CTTGCTATTGGGTGGCTGTTCTGCATGAAATTTCCCAAATTGACTTaGGTGCAGCAACTTTCCCCACTCTTCCTGGCAGTCTCTTTAAGC +
Preference number: 5 (lower is better)
Translates to: LAIGWLFCMKFPKLT*VQQLSPLFLAVSLS
Trigger: GCTTAAAGAGACTGCCAGGAAGAGTGGGGAAAGTTGCTGCACTCAAGTCAATTTGGGAAATTTCATGCAGAACAGCCACCCAATAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS GCA 90 bp GTCAGGCGTAGCTATCTATCTCTTTGGGAAGATGAGGTTGTTACCTaGTGTTGGAGAAACCAAGACGTGGGTGACACACAGTCTTTATCA +
Preference number: 5 (lower is better)
Translates to: VRRSYLSLWEDEVVT*CWRNQDVGDTQSLS
Trigger: TGATAAAGACTGTGTGTCACCCACGTCTTGGTTTCTCCAACAGCAGGTAACAACCTCATCTTCCCAAAGAGATAGATAGCTACGCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp GCTTTACTGGTTGGCCTTACACTCAAACAGGAAATCCCTGGGTCTCAGGTGGAGTTTATTAATGGAGCTTaGACAGTCACAAGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: ALLVGLTLKQEIPGSQVEFINGA*TVTSSS
Trigger: GCTGGAACTTGTGACTGTCAAAGCTCCATTAATAAA...CTCCACCTGAGACCCAGGGATTTCCTGTTTGAGTGTAAGGCCAACCAGTAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS TCA 90 bp GTAAGGATGGTGCCACAGTTAGATGCTTCAACTAAGAAAGCTGTTTaGCAGCGTAGAGAAGCTGCCTTCCTTGAAAGCAGCCTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: VRMVPQLDASTKKAV*QRREAAFLESSLSE
Trigger: TTCAGAAAGGCTGCTTTCAAGGAAGGCAGCTTCTCTACGCTGTCAAACAGCTTTCTTAGTTGAAGCATCTAACTGTGGCACCATCCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp GGCTTTCCTGAGATGACAGATTCCTTTCTGGCACTGTGTAGCCAACTGGAGTCATTTATTAATGGAGCTTaGACAGTCACAAGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: GFPEMTDSFLALCSQLESFINGA*TVTSSS
Trigger: GCTGGAACTTGTGACTGTCAAAGCTCCATTAATAAA...TGACTCCAGTTGGCTACACAGTGCCAGAAAGGAATCTGTCATCTCAGGAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS-3UTR CAA 90 bp TTTTACACATTCTTTCTGAAAGTAAGGTCATTTGGGGACAGGGCTGAGAGCAGTGAGAAGCTGCCTTCCTaGAAAGCAGCCTTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: FYTFFLKVRSFGDRAESSEKLPS*KAAFLK
Trigger: CTTCAGAAAGGCTGCTTTCAAGGAAGGCAGCTTCTC...ACTGCTCTCAGCCCTGTCCCCAAATGACCTTACTTTCAGAAAGAATGTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS-3UTR CAA 90 bp CAAATGAGCATTTTAGGGAGAAGGACAATCCCTTATAGCTTAGCCCTAGGGGAGTTTATTAATGGAGCTTaGACAGTCACAAGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: QMSILGRRTIPYSLALGEFINGA*TVTSSS
Trigger: GCTGGAACTTGTGACTGTCAAAGCTCCATTAATAAA...CTCCCCTAGGGCTAAGCTATAAGGGATTGTCCTTCTCCCTAAAATGCTCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS TCA 72 bp TGGTGGCTCCCGCGGGAGCATGGGAGGTGCCTGCCCTaGGCTCCCATAGCCTCCCGACCCCTGGCCGGTAGC +
Preference number: 6 (lower is better)
Translates to: WWLPREHGRCLP*APIASRPLAGS
Trigger: GCTACCGGCCAGGGGTCGGGAGGCTATGGGAGCTCAGGGCAGGCACCTCCCATGCTCCCGCGGGAGCCACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS CCA 72 bp CCAGCCACCTCTGCCTGCACCACTCCTGGATGGCGCTaGCAGACAGCGGGCCCTGGATGCTCCCGTCGCGCC +
Preference number: 6 (lower is better)
Translates to: PATSACTTPGWR*QTAGPGCSRRA
Trigger: GGCGCGACGGGAGCATCCAGGGCCCGCTGTCTGCCAGCGCCATCCAGGAGTGGTGCAGGCAGAGGTGGCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS GCA 72 bp GCGCGGTCCTCGTCACGGTGGCTGCAGCGGATGCCCTaGACCAGGCCGCTGTCCTCTACTCCCACGAGCAGG +
Preference number: 6 (lower is better)
Translates to: ARSSSRWLQRMP*TRPLSSTPTSR
Trigger: CCTGCTCGTGGGAGTAGAGGACAGCGGCCTGGTGCAGGGCATCCGCTGCAGCCACCGTGACGAGGACCGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 72 bp CCACCAGCAGGCGTGCGCGGTCCTCGTCACGGTGGCTaGAGCGGATGCCCTGCACCAGGCCGCTGTCCTCTA +
Preference number: 6 (lower is better)
Translates to: PPAGVRGPRHGG*SGCPAPGRCPL
Trigger: TAGAGGACAGCGGCCTGGTGCAGGGCATCCGCTGCAGCCACCGTGACGAGGACCGCGCACGCCTGCTGGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS CCA 72 bp CACCACTCCTGGATGGCGCTGGCAGACAGCGGGCCCTaGATGCTCCCGTCGCGCCGCAGAAACACCTCCCCC +
Preference number: 6 (lower is better)
Translates to: HHSWMALADSGP*MLPSRRRNTSP
Trigger: GGGGGAGGTGTTTCTGCGGCGCGACGGGAGCATCCAGGGCCCGCTGTCTGCCAGCGCCATCCAGGAGTGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS GCA 72 bp ACTCCTGGATGGCGCTGGCAGACAGCGGGCCCTGGATaGTCCCGTCGCGCCGCAGAAACACCTCCCCCTGGT +
Preference number: 6 (lower is better)
Translates to: TPGWRWQTAGPG*SRRAAETPPPG
Trigger: ACCAGGGGGAGGTGTTTCTGCGGCGCGACGGGAGCATCCAGGGCCCGCTGTCTGCCAGCGCCATCCAGGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS GCA 72 bp GGTGGCAGTGCGAGGCTCTGGGGAGAGTGCATTCGGTaGCCTCTCCTTGCCCGCCCGGGCAGCAGCCAGGTT +
Preference number: 6 (lower is better)
Translates to: GGSARLWGECIR*PLLARPGSSQV
Trigger: AACCTGGCTGCTGCCCGGGCGGGCAAGGAGAGGGCACCGAATGCACTCTCCCCAGAGCCTCGCACTGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS GCA 72 bp GCCTCAACTGGTGGCAGTGCGAGGCTCTGGGGAGAGTaGATTCGGTGCCCTCTCCTTGCCCGCCCGGGCAGC +
Preference number: 6 (lower is better)
Translates to: ASTGGSARLWGE*IRCPLLARPGS
Trigger: GCTGCCCGGGCGGGCAAGGAGAGGGCACCGAATGCACTCTCCCCAGAGCCTCGCACTGCCACCAGTTGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CCA 72 bp GGGGCGCAGGCCTCAACTGGTGGCAGTGCGAGGCTCTaGGGAGAGTGCATTCGGTGCCCTCTCCTTGCCCGC +
Preference number: 6 (lower is better)
Translates to: GAQASTGGSARL*GECIRCPLLAR
Trigger: GCGGGCAAGGAGAGGGCACCGAATGCACTCTCCCCAGAGCCTCGCACTGCCACCAGTTGAGGCCTGCGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CAA 90 bp CCCGTCGCGCCGCAGAAACACCTCCCCCTGGTCTGTCTGGTAGAGTaGCGGCTGGCTCTGGGCCTTGGGGGTGTGCACGGTCAGGCGGAT +
Preference number: 6 (lower is better)
Translates to: PVAPQKHLPLVCLVE*RLALGLGGVHGQAD
Trigger: ATCCGCCTGACCGTGCACACCCCCAAGGCCCAGAGCCAGCCGCAACTCTACCAGACAGACCAGGGGGAGGTGTTTCTGCGGCGCGACGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000439569.2
CDS TCA 72 bp CCTCTACTCCCACGAGCAGGCTGCCGCCCTCGCTGTTaGGGAAGGCGCACACGTAGCGCCGCACGTGGTGCT +
Preference number: 6 (lower is better)
Translates to: PLLPRAGCRPRC*GRRTRSAARGA
Trigger: AGCACCACGTGCGGCGCTACGTGTGCGCCTTCCTCAACAGCGAGGGCGGCAGCCTGCTCGTGGGAGTAGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 72 bp TCCTTCCCACGGGCTGCCAGCTCCTTGAGGATTAGGTaGTCCTCCAGGGCCGTCTGCAGGCGCCAGGGGAGG +
Preference number: 6 (lower is better)
Translates to: SFPRAASSLRIR*SSRAVCRRQGR
Trigger: CCTCCCCTGGCGCCTGCAGACGGCCCTGGAGGAGCACCTAATCCTCAAGGAGCTGGCAGCCCGTGGGAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 72 bp CTTGAAGCCCTGCAGGATGGAGTCCACCAGCAGGCGTaGGCGGTCCTCGTCACGGTGGCTGCAGCGGATGCC +
Preference number: 6 (lower is better)
Translates to: LEALQDGVHQQA*AVLVTVAAADA
Trigger: GGCATCCGCTGCAGCCACCGTGACGAGGACCGCGCACGCCTGCTGGTGGACTCCATCCTGCAGGGCTTCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS CCA 72 bp CGGGATCTTCATGTCCTGGTGGCTCCCGCGGGAGCATaGGAGGTGCCTGCCCTGAGCTCCCATAGCCTCCCG +
Preference number: 6 (lower is better)
Translates to: RDLHVLVAPAGA*EVPALSSHSLP
Trigger: CGGGAGGCTATGGGAGCTCAGGGCAGGCACCTCCCATGCTCCCGCGGGAGCCACCAGGACATGAAGATCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372611.5
CDS GCA 72 bp GGAGCCTCCTCGAGGTCAGAGTACTCCGTCAGGGACTaGTCTGCGGGTAGCTCCGGCAGGGACTCCTCACCC +
Preference number: 6 (lower is better)
Translates to: GASSRSEYSVRD*SAGSSGRDSSP
Trigger: GGGTGAGGAGTCCCTGCCGGAGCTACCCGCAGAGCAGTCCCTGACGGAGTACTCTGACCTCGAGGAGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS CCA 72 bp AGAGCTGGTCCTTGCCCACGATCTGCTGGTGCACAATaGCACTGTCGGAGCACACGCCGCTGGGCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: RAGPCPRSAGAQ*HCRSTRRWAGP
Trigger: AGGGCCGGCCCAGCGGCGTGTGCTCCGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGACCAGCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS CAA 90 bp TGGGCCTCACTCAATAGCAGGTCCTTCCCACGGGCTGCCAGCTCCTaGAGGATTAGGTGCTCCTCCAGGGCCGTCTGCAGGCGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: WASLNSRSFPRAASS*RIRCSSRAVCRRQG
Trigger: CCCCTGGCGCCTGCAGACGGCCCTGGAGGAGCACCTAATCCTCAAGGAGCTGGCAGCCCGTGGGAAGGACCTGCTATTGAGTGAGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 72 bp CCCTGGAAGAGCTGGTCCTTGCCCACGATCTGCTGGTaGACAATGGCACTGTCGGAGCACACGCCGCTGGGC +
Preference number: 6 (lower is better)
Translates to: PWKSWSLPTICW*TMALSEHTPLG
Trigger: GCCCAGCGGCGTGTGCTCCGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS CCA 72 bp TATGACCTTCATGTCCTGGTGGCTCCCGCGGGAGCATaGGAGGTGCCTGCCCTGAGCTCCCATAGCCTCCCG +
Preference number: 6 (lower is better)
Translates to: YDLHVLVAPAGA*EVPALSSHSLP
Trigger: CGGGAGGCTATGGGAGCTCAGGGCAGGCACCTCCCATGCTCCCGCGGGAGCCACCAGGACATGAAGGTCATA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS CCA 72 bp AGAGGAGGAGAGGAGAGGCCTATGACCTTCATGTCCTaGTGGCTCCCGCGGGAGCATGGGAGGTGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: RGGEERPMTFMS*WLPREHGRCLP
Trigger: GGGCAGGCACCTCCCATGCTCCCGCGGGAGCCACCAGGACATGAAGGTCATAGGCCTCTCCTCTCCTCCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS CCA 72 bp AGGGCTCCCAGAGGACTCAGGGAGTGTCCCGGCTCCTaGGAGGTACACAGATTGGCAGAGACTGGGCAGGGC +
Preference number: 6 (lower is better)
Translates to: RAPRGLRECPGS*EVHRLAETGQG
Trigger: GCCCTGCCCAGTCTCTGCCAATCTGTGTACCTCCCAGGAGCCGGGACACTCCCTGAGTCCTCTGGGAGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS GCA 72 bp GGCCAGGGTGTCCCTGTGGACAGTCACCTGCACCAGTaGATAGGCCTTCCGCGGCCGCCTCACCACTTCAAT +
Preference number: 6 (lower is better)
Translates to: GQGVPVDSHLHQ*IGLPRPPHHFN
Trigger: ATTGAAGTGGTGAGGCGGCCGCGGAAGGCCTATGCACTGGTGCAGGTGACTGTCCACAGGGACACCCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 72 bp CGCTGCCCAGGAAGGCACCCTGGAAGAGCTGGTCCTTaGCCACGATCTGCTGGTGCACAATGGCACTGTCGG +
Preference number: 6 (lower is better)
Translates to: RCPGRHPGRAGP*PRSAGAQWHCR
Trigger: CCGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCTGGGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS CCA 72 bp GCACCCTGGAAGAGCTGGTCCTTGCCCACGATCTGCTaGTGCACAATGGCACTGTCGGAGCACACGCCGCTG +
Preference number: 6 (lower is better)
Translates to: APWKSWSLPTIC*CTMALSEHTPL
Trigger: CAGCGGCGTGTGCTCCGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS CAA 72 bp TCGCTGCCCAGGAAGGCACCCTGGAAGAGCTGGTCCTaGCCCACGATCTGCTCTCTGTGGCTGAAGGGCCCT +
Preference number: 6 (lower is better)
Translates to: SLPRKAPWKSWS*PTICSLWLKGP
Trigger: AGGGCCCTTCAGCCACAGAGAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCTGGGCAGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372611.5
CDS CAA 90 bp TTGCGGGTCTCGCTGCCCAGGAAGGCACCCTGGAAGAGCTGGTCCTaGCCCACGATCTGCTGGTGCACAATGGCACTGTCGGAGCACACG +
Preference number: 6 (lower is better)
Translates to: LRVSLPRKAPWKSWS*PTICWCTMALSEHT
Trigger: CGTGTGCTCCGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCTGGGCAGCGAGACCCGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS CAA 90 bp AAGGCCAGGCTGAGGTACTCGCCGCTACCCCGCTTGAACTCCATATaGCGGGTCTCGCTGCCCAGGAAGGCACCCTGGAAGAGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: KARLRYSPLPRLNSI*RVSLPRKAPWKSWS
Trigger: GGACCAGCTCTTCCAGGGTGCCTTCCTGGGCAGCGAGACCCGCAATATGGAGTTCAAGCGGGGTAGCGGCGAGTACCTCAGCCTGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS CAA 90 bp ACGTGGTGCTTGAAGGCCAGGCTGAGGTACTCGCCGCTACCCCGCTaGAACTCCATATTGCGGGTCTCGCTGCCCAGGAAGGCACCCTGG +
Preference number: 6 (lower is better)
Translates to: TWCLKARLRYSPLPR*NSILRVSLPRKAPW
Trigger: CCAGGGTGCCTTCCTGGGCAGCGAGACCCGCAATATGGAGTTCAAGCGGGGTAGCGGCGAGTACCTCAGCCTGGCCTTCAAGCACCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS TCA 72 bp TCAATAGCAGGTCCTTCCCACGGGCTGCCAGCTCCTTaGGGATTAGGTGCTCCTCCAGGGCCGTCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: SIAGPSHGLPAP*GLGAPPGPSAG
Trigger: GCCTGCAGACGGCCCTGGAGGAGCACCTAATCCTCAAGGAGCTGGCAGCCCGTGGGAAGGACCTGCTATTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 72 bp AAGGCACCCTGGAAGAGCTGGTCCTTGCCCACGATCTaGTGGTGCACAATGGCACTGTCGGAGCACACGCCG +
Preference number: 6 (lower is better)
Translates to: KAPWKSWSLPTI*WCTMALSEHTP
Trigger: CGGCGTGTGCTCCGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS CCA 72 bp TCCATATTGCGGGTCTCGCTGCCCAGGAAGGCACCCTaGAAGAGCTGGTCCTTGCCCACGATCTGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: SILRVSLPRKAP*KSWSLPTICWC
Trigger: GCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCTGGGCAGCGAGACCCGCAATATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS CCA 72 bp CTACTGAGTACTGACAGGGCCCAGCTGCTCCCAAGATaGAGCAGGAGGCACATGGTAGGCTCCAGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: LLSTDRAQLLPR*SRRHMVGSRAP
Trigger: GGGAGCCCTGGAGCCTACCATGTGCCTCCTGCTCCATCTTGGGAGCAGCTGGGCCCTGTCAGTACTCAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CCA 72 bp CCTGGAGAGGAGGCCTTAACCCAGGACTCTGAGGACTaGCTGGTGGCCCCATTGCAGCTTCTCTGCCTGCTC +
Preference number: 6 (lower is better)
Translates to: PGEEALTQDSED*LVAPLQLLCLL
Trigger: GAGCAGGCAGAGAAGCTGCAATGGGGCCACCAGCCAGTCCTCAGAGTCCTGGGTTAAGGCCTCCTCTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS CAA 72 bp CTCAATAGCAGGTCCTTCCCACGGGCTGCCAGCTCCTaGAGGATTAGGTGCTCCTCCAGGGCCGTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: LNSRSFPRAASS*RIRCSSRAVCR
Trigger: CCTGCAGACGGCCCTGGAGGAGCACCTAATCCTCAAGGAGCTGGCAGCCCGTGGGAAGGACCTGCTATTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS CAA 72 bp TCGCTGCCCAGGAAGGCACCCTGGAAGAGCTGGTCCTaGCCCACGATCTGCTGGTGCACAATGGCACTGTCG +
Preference number: 6 (lower is better)
Translates to: SLPRKAPWKSWS*PTICWCTMALS
Trigger: CGACAGTGCCATTGTGCACCAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCTGGGCAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS CAA 72 bp CTGAGGTACTCGCCGCTACCCCGCTTGAACTCCATATaGCGGGTCTCGCTGCCCAGGAAGGCACCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: LRYSPLPRLNSI*RVSLPRKAPWK
Trigger: CTTCCAGGGTGCCTTCCTGGGCAGCGAGACCCGCAATATGGAGTTCAAGCGGGGTAGCGGCGAGTACCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS TCA 72 bp CAGGGTGTCTCGCAGCAGGCAGGCAAGCACCGGCACTaGGAACTGGGGGTTCAGATGGCCCACATAGAGAGT +
Preference number: 6 (lower is better)
Translates to: QGVSQQAGKHRH*ELGVQMAHIES
Trigger: ACTCTCTATGTGGGCCATCTGAACCCCCAGTTCTCAGTGCCGGTGCTTGCCTGCCTGCTGCGAGACACCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 72 bp CACACACTGGAAGCAGACCCAGCGGCCCACCCACCATaGAGCTTGGCTGTGGGACACACTTCCCCACTTAGT +
Preference number: 6 (lower is better)
Translates to: HTLEADPAAHPP*SLAVGHTSPLS
Trigger: ACTAAGTGGGGAAGTGTGTCCCACAGCCAAGCTGCATGGTGGGTGGGCCGCTGGGTCTGCTTCCAGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CCA 72 bp CTGCAGAAGGCTGGCAGCGCTTGCCCACACTGCTTCTaGAAGCCCCAATTGGGGGCAGTAAGGATGGTGCCA +
Preference number: 6 (lower is better)
Translates to: LQKAGSACPHCF*KPQLGAVRMVP
Trigger: TGGCACCATCCTTACTGCCCCCAATTGGGGCTTCCAGAAGCAGTGTGGGCAAGCGCTGCCAGCCTTCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CCA 72 bp GCAGAGTCACGTGGACTGAGCAAGACACAGGGCCTGTaGGAAGACGGGATCTTCATGTCCTGGTGGCTCCCG +
Preference number: 6 (lower is better)
Translates to: AESRGLSKTQGL*EDGIFMSWWLP
Trigger: CGGGAGCCACCAGGACATGAAGATCCCGTCTTCCCACAGGCCCTGTGTCTTGCTCAGTCCACGTGACTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372611.5
CDS CCA 72 bp TTGCCCACGATCTGCTCTCTGTGGCTGAAGGGCCCTTaGGCCTCACTCAATAGCAGGTCCTTCCCACGGGCT +
Preference number: 6 (lower is better)
Translates to: LPTICSLWLKGP*ASLNSRSFPRA
Trigger: AGCCCGTGGGAAGGACCTGCTATTGAGTGAGGCCCAAGGGCCCTTCAGCCACAGAGAGCAGATCGTGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372611.5
CDS CCA 72 bp TCCATATTGCGGGTCTCGCTGCCCAGGAAGGCACCCTaGAAGAGCTGGTCCTTGCCCACGATCTGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: SILRVSLPRKAP*KSWSLPTICSL
Trigger: CAGAGAGCAGATCGTGGGCAAGGACCAGCTCTTCCAGGGTGCCTTCCTGGGCAGCGAGACCCGCAATATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372611.5
CDS CAA 72 bp TTGAAGGCCAGGCTGAGGTACTCGCCGCTACCCCGCTaGAACTCCATATTGCGGGTCTCGCTGCCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: LKARLRYSPLPR*NSILRVSLPRK
Trigger: CTTCCTGGGCAGCGAGACCCGCAATATGGAGTTCAAGCGGGGTAGCGGCGAGTACCTCAGCCTGGCCTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS TCA 72 bp TGTCCTCCTCCTCCTCCTCCTTCTCCTCTCTGTGGCTaGAGGGCCCTTGGGCCTCACTCAATAGCAGGTCCT +
Preference number: 6 (lower is better)
Translates to: CPPPPPPSPLCG*RALGPHSIAGP
Trigger: AGGACCTGCTATTGAGTGAGGCCCAAGGGCCCTTCAGCCACAGAGAGGAGAAGGAGGAGGAGGAGGAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS TCA 72 bp CTCGGCTTTGTGTCCACAGCTCTTAGGGTTAGAGAATaGCGGCTCCAAGCTCCCCCTGCCTCACCCCCTCTC +
Preference number: 6 (lower is better)
Translates to: LGFVSTALRVRE*RLQAPPASPPL
Trigger: GAGAGGGGGTGAGGCAGGGGGAGCTTGGAGCCGTCATTCTCTAACCCTAAGAGCTGTGGACACAAAGCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS GCA 72 bp CCCCAGGACTCCATGAAGGGCTCTGACACCTGTGTTTaGACTGATCTCTTCATGGGGGTCATGGGAAGGCTC +
Preference number: 6 (lower is better)
Translates to: PQDSMKGSDTCV*TDLFMGVMGRL
Trigger: GAGCCTTCCCATGACCCCCATGAAGAGATCAGTGCAAACACAGGTGTCAGAGCCCTTCATGGAGTCCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS GCA 72 bp ATCATTCTGCAGAAGGCTGGCAGCGCTTGCCCACACTaGTTCTGGAAGCCCCAATTGGGGGCAGTAAGGATG +
Preference number: 6 (lower is better)
Translates to: IILQKAGSACPH*FWKPQLGAVRM
Trigger: CATCCTTACTGCCCCCAATTGGGGCTTCCAGAAGCAGTGTGGGCAAGCGCTGCCAGCCTTCTGCAGAATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS GCA 72 bp CTGAGCAAGACACAGGGCCTGTGGGAAGACGGGATCTaGCCAAAAAGTGGCAGAAGGGACCAGAACTCAGGT +
Preference number: 6 (lower is better)
Translates to: LSKTQGLWEDGI*PKSGRRDQNSG
Trigger: ACCTGAGTTCTGGTCCCTTCTGCCACTTTTTGGGCAGATCCCGTCTTCCCACAGGCCCTGTGTCTTGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS CAA 90 bp CCACACACCCAGCCTGCATCTTCTCAAATGGAATCCTTGAGGCAGTaGGCCTGGGGGCATTCAGGTCAAACAGGAAGAGGAGGAGAGGAG +
Preference number: 6 (lower is better)
Translates to: PHTQPASSQMESLRQ*AWGHSGQTGRGGEE
Trigger: CTCCTCTCCTCCTCTTCCTGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGAAGATGCAGGCTGGGTGTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS CAA 90 bp GACGGGATCCAGCCTGCATCTTCTCAAATGGAATCCTTGAGGCAGTaGGCCTGGGGGCATTCAGGTCAAACAGGAAGAGGAGGAGAGGAG +
Preference number: 6 (lower is better)
Translates to: DGIQPASSQMESLRQ*AWGHSGQTGRGGEE
Trigger: CTCCTCTCCTCCTCTTCCTGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGAAGATGCAGGCTGGATCCCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439569.2
CDS TCA 72 bp TTTAGTCAGTCACCAATCCCAGGCTCTACTGAGTACTaGCAGGGCCCAGCTGCTCCCAAGATGGAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: FSQSPIPGSTEY*QGPAAPKMEQE
Trigger: CTCCTGCTCCATCTTGGGAGCAGCTGGGCCCTGTCAGTACTCAGTAGAGCCTGGGATTGGTGACTGACTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS GCA 72 bp GGTACCCTCAGGGTTTCCTGCCTACCAGTTCACTCCTaGCTCCAGGCAACAGAGAAAACCTTTACACAGGGC +
Preference number: 6 (lower is better)
Translates to: GTLRVSCLPVHS*LQATEKTFTQG
Trigger: GCCCTGTGTAAAGGTTTTCTCTGTTGCCTGGAGGCAGGAGTGAACTGGTAGGCAGGAAACCCTGAGGGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS CCA 72 bp ACACCTGTGTTTGCACTGATCTCTTCATGGGGGTCATaGGAAGGCTCTCCCTGGGAAGGGGTTCCAGGATTC +
Preference number: 6 (lower is better)
Translates to: TPVFALISSWGS*EGSPWEGVPGF
Trigger: GAATCCTGGAACCCCTTCCCAGGGAGAGCCTTCCCATGACCCCCATGAAGAGATCAGTGCAAACACAGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302946.12
ENST00000359345.5
ENST00000372611.5
ENST00000372613.6
ENST00000439569.2
CDS CAA 90 bp TACTGCTCCCCACACACCCAGCCTGCATCTTCTCAAATGGAATCCTaGAGGCAGTTGGCCTGGGGGCATTCAGGTCAAACAGGAAGAGGA +
Preference number: 6 (lower is better)
Translates to: YCSPHTQPASSQMES*RQLAWGHSGQTGRG
Trigger: TCCTCTTCCTGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGAAGATGCAGGCTGGGTGTGTGGGGAGCAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS CAA 90 bp CTGTGGGAAGACGGGATCCAGCCTGCATCTTCTCAAATGGAATCCTaGAGGCAGTTGGCCTGGGGGCATTCAGGTCAAACAGGAAGAGGA +
Preference number: 6 (lower is better)
Translates to: LWEDGIQPASSQMES*RQLAWGHSGQTGRG
Trigger: TCCTCTTCCTGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGAAGATGCAGGCTGGATCCCGTCTTCCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439569.2
CDS TCA 72 bp GACGTGGGTGACACACAGTCTTTATCAGCACAGGACTaGCCAGTGCTCATCATTCTGCAGAAGGCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: DVGDTQSLSAQD*PVLIILQKAGS
Trigger: GCTGCCAGCCTTCTGCAGAATGATGAGCACTGGTCAGTCCTGTGCTGATAAAGACTGTGTGTCACCCACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS TCA 72 bp TATAGGAAGTGGGCGGGGCCTGCACAGCTACCTCTGTaGTCTCATGAGGTTCAACAATGCCTTCTTGGCCAG +
Preference number: 6 (lower is better)
Translates to: YRKWAGPAQLPL*SHEVQQCLLGQ
Trigger: CTGGCCAAGAAGGCATTGTTGAACCTCATGAGATCACAGAGGTAGCTGTGCAGGCCCCGCCCACTTCCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS TCA 72 bp CACACACCCAGCCTGCATCTTCTCAAATGGAATCCTTaGGGCAGTTGGCCTGGGGGCATTCAGGTCAAACAG +
Preference number: 6 (lower is better)
Translates to: HTPSLHLLKWNP*GSWPGGIQVKQ
Trigger: CTGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGAAGATGCAGGCTGGGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS TCA 72 bp ACGGGATCCAGCCTGCATCTTCTCAAATGGAATCCTTaGGGCAGTTGGCCTGGGGGCATTCAGGTCAAACAG +
Preference number: 6 (lower is better)
Translates to: TGSSLHLLKWNP*GSWPGGIQVKQ
Trigger: CTGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGAAGATGCAGGCTGGATCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439569.2
CDS GCA 72 bp CTTTATCAGCACAGGACTGACCAGTGCTCATCATTCTaGAGAAGGCTGGCAGCGCTTGCCCACACTGCTTCT +
Preference number: 6 (lower is better)
Translates to: LYQHRTDQCSSF*RRLAALAHTAS
Trigger: AGAAGCAGTGTGGGCAAGCGCTGCCAGCCTTCTGCAGAATGATGAGCACTGGTCAGTCCTGTGCTGATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS GCA 72 bp GTGACACACAGTCTTTATCAGCACAGGACTGACCAGTaGTCATCATTCTGCAGAAGGCTGGCAGCGCTTGCC +
Preference number: 6 (lower is better)
Translates to: VTHSLYQHRTDQ*SSFCRRLAALA
Trigger: GGCAAGCGCTGCCAGCCTTCTGCAGAATGATGAGCACTGGTCAGTCCTGTGCTGATAAAGACTGTGTGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CAA 72 bp CCACACACCCAGCCTGCATCTTCTCAAATGGAATCCTaGAGGCAGTTGGCCTGGGGGCATTCAGGTCAAACA +
Preference number: 6 (lower is better)
Translates to: PHTQPASSQMES*RQLAWGHSGQT
Trigger: TGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGAAGATGCAGGCTGGGTGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359345.5
ENST00000372613.6
CDS CAA 72 bp GACGGGATCCAGCCTGCATCTTCTCAAATGGAATCCTaGAGGCAGTTGGCCTGGGGGCATTCAGGTCAAACA +
Preference number: 6 (lower is better)
Translates to: DGIQPASSQMES*RQLAWGHSGQT
Trigger: TGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGAAGATGCAGGCTGGATCCCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439569.2
CDS CAA 90 bp CTGCACAGCTACCTCTGTGATCTCATGAGGTTCAACAATGCCTTCTaGGCCAGCCACAGGCAGGCTGGGTGCGGGAAATCAAACAGGAAA +
Preference number: 6 (lower is better)
Translates to: LHSYLCDLMRFNNAF*ASHRQAGCGKSNRK
Trigger: TTTCCTGTTTGATTTCCCGCACCCAGCCTGCCTGTGGCTGGCCAAGAAGGCATTGTTGAACCTCATGAGATCACAGAGGTAGCTGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CCA 72 bp GCATCTTCTCAAATGGAATCCTTGAGGCAGTTGGCCTaGGGGCATTCAGGTCAAACAGGAAGAGGAGGAGAG +
Preference number: 6 (lower is better)
Translates to: ASSQMESLRQLA*GHSGQTGRGGE
Trigger: CTCTCCTCCTCTTCCTGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGAAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS CAA 72 bp CAGCCTGCATCTTCTCAAATGGAATCCTTGAGGCAGTaGGCCTGGGGGCATTCAGGTCAAACAGGAAGAGGA +
Preference number: 6 (lower is better)
Translates to: QPASSQMESLRQ*AWGHSGQTGRG
Trigger: TCCTCTTCCTGTTTGACCTGAATGCCCCCAGGCCAACTGCCTCAAGGATTCCATTTGAGAAGATGCAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359345.5
ENST00000372613.6
ENST00000439569.2
CDS TCA 72 bp GGGTGGCTGTTCTGCATGAAATTTCCCAAATTGACTTaGGTGCAGCAACTTTCCCCACTCTTCCTGGCAGTC +
Preference number: 6 (lower is better)
Translates to: GWLFCMKFPKLT*VQQLSPLFLAV
Trigger: GACTGCCAGGAAGAGTGGGGAAAGTTGCTGCACTCAAGTCAATTTGGGAAATTTCATGCAGAACAGCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS TCA 72 bp TTGCCTCTGTCATCCATGAGGTGCCCTCACAGCAACTaGGGCTATAGCTGTTTTGAGATGGCCAACTCAAGT +
Preference number: 6 (lower is better)
Translates to: LPLSSMRCPHSN*GYSCFEMANSS
Trigger: ACTTGAGTTGGCCATCTCAAAACAGCTATAGCCTCAGTTGCTGTGAGGGCACCTCATGGATGACAGAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS TCA 72 bp GGTTGTTACCTGCTGTTGGAGAAACCAAGACGTGGGTaGCACACAGTCTTTATCAGCACAGGACTGACCAGT +
Preference number: 6 (lower is better)
Translates to: GCYLLLEKPRRG*HTVFISTGLTS
Trigger: ACTGGTCAGTCCTGTGCTGATAAAGACTGTGTGTCACCCACGTCTTGGTTTCTCCAACAGCAGGTAACAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CAA 90 bp GCAACTGAGGCTATAGCTGTTTTGAGATGGCCAACTCAAGTCGTGTaGAACTGTGCAGAAATAGCTGTCCGGGAGAAGCACCTTGACAGA +
Preference number: 6 (lower is better)
Translates to: ATEAIAVLRWPTQVV*NCAEIAVREKHLDR
Trigger: TCTGTCAAGGTGCTTCTCCCGGACAGCTATTTCTGCACAGTTCAACACGACTTGAGTTGGCCATCTCAAAACAGCTATAGCCTCAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CAA 72 bp GCTATAGCTGTTTTGAGATGGCCAACTCAAGTCGTGTaGAACTGTGCAGAAATAGCTGTCCGGGAGAAGCAC +
Preference number: 6 (lower is better)
Translates to: AIAVLRWPTQVV*NCAEIAVREKH
Trigger: GTGCTTCTCCCGGACAGCTATTTCTGCACAGTTCAACACGACTTGAGTTGGCCATCTCAAAACAGCTATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CAA 72 bp TCAGGCGTAGCTATCTATCTCTTTGGGAAGATGAGGTaGTTACCTGCTGTTGGAGAAACCAAGACGTGGGTG +
Preference number: 6 (lower is better)
Translates to: SGVAIYLFGKMR*LPAVGETKTWV
Trigger: CACCCACGTCTTGGTTTCTCCAACAGCAGGTAACAACCTCATCTTCCCAAAGAGATAGATAGCTACGCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS TCA 72 bp GTGCCACAGTTAGATGCTTCAACTAAGAAAGCTGTTTaGCAGCGTAGAGAAGCTGCCTTCCTTGAAAGCAGC +
Preference number: 6 (lower is better)
Translates to: VPQLDASTKKAV*QRREAAFLESS
Trigger: GCTGCTTTCAAGGAAGGCAGCTTCTCTACGCTGTCAAACAGCTTTCTTAGTTGAAGCATCTAACTGTGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CCA 72 bp GCCCTCACAGCAACTGAGGCTATAGCTGTTTTGAGATaGCCAACTCAAGTCGTGTTGAACTGTGCAGAAATA +
Preference number: 6 (lower is better)
Translates to: ALTATEAIAVLR*PTQVVLNCAEI
Trigger: TATTTCTGCACAGTTCAACACGACTTGAGTTGGCCATCTCAAAACAGCTATAGCCTCAGTTGCTGTGAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CAA 90 bp AAAAATAGGTCAGGCGTAGCTATCTATCTCTTTGGGAAGATGAGGTaGTTACCTGCTGTTGGAGAAACCAAGACGTGGGTGACACACAGT +
Preference number: 6 (lower is better)
Translates to: KNRSGVAIYLFGKMR*LPAVGETKTWVTHS
Trigger: ACTGTGTGTCACCCACGTCTTGGTTTCTCCAACAGCAGGTAACAACCTCATCTTCCCAAAGAGATAGATAGCTACGCCTGACCTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CAA 72 bp AGAAAGCTGTTTGACAGCGTAGAGAAGCTGCCTTCCTaGAAAGCAGCCTTTCTGAAGATGTTACCAAATGTT +
Preference number: 6 (lower is better)
Translates to: RKLFDSVEKLPS*KAAFLKMLPNV
Trigger: AACATTTGGTAACATCTTCAGAAAGGCTGCTTTCAAGGAAGGCAGCTTCTCTACGCTGTCAAACAGCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5
CDS CAA 90 bp CTTCAACTAAGAAAGCTGTTTGACAGCGTAGAGAAGCTGCCTTCCTaGAAAGCAGCCTTTCTGAAGATGTTACCAAATGTTTGTTTCCTA +
Preference number: 6 (lower is better)
Translates to: LQLRKLFDSVEKLPS*KAAFLKMLPNVCFL
Trigger: TAGGAAACAAACATTTGGTAACATCTTCAGAAAGGCTGCTTTCAAGGAAGGCAGCTTCTCTACGCTGTCAAACAGCTTTCTTAGTTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359345.5