RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLCO1C1 (Homo sapiens)

Ensembl gene IDs: ENSG00000139155

Ensembl transcript IDs: ENST00000266509.7, ENST00000497911.6, ENST00000534996.5, ENST00000535609.1, ENST00000539415.5, ENST00000540354.5, ENST00000545102.1, ENST00000545604.5

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCCCGATCACAAAGTTGGCCCTGGAGGATGACTGTCCATACTGCTaGTCAATGTACTTTGGTTTGTACGTCACCATGCCGAACAGAGAA +
Preference number: 1 (lower is better)
Translates to: SPITKLALEDDCPYC*SMYFGLYVTMPNRE
Trigger: TTCTCTGTTCGGCATGGTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAGGGCCAACTTTGTGATCGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR GCA 90 bp ATGAGCCCGATCACAAAGTTGGCCCTGGAGGATGACTGTCCATACTaGTGCTCAATGTACTTTGGTTTGTACGTCACCATGCCGAACAGA +
Preference number: 1 (lower is better)
Translates to: MSPITKLALEDDCPY*CSMYFGLYVTMPNR
Trigger: TCTGTTCGGCATGGTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAGGGCCAACTTTGTGATCGGGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR TCA 90 bp TGCTGGAATGTTGATGAGCCCGATCACAAAGTTGGCCCTGGAGGATaGCTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCAC +
Preference number: 1 (lower is better)
Translates to: CWNVDEPDHKVGPGG*LSILLLNVLWFVRH
Trigger: GTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAGGGCCAACTTTGTGATCGGGCTCATCAACATTCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR TCA 90 bp GCTCAATGTACTTTGGTTTGTACGTCACCATGCCGAACAGAGAATTaGACTGAACAGTGCTTGTACATAAATATAGGAAGTATACTGGGT +
Preference number: 1 (lower is better)
Translates to: AQCTLVCTSPCRTEN*TEQCLYINIGSILG
Trigger: ACCCAGTATACTTCCTATATTTATGTACAAGCACTGTTCAGTTCAATTCTCTGTTCGGCATGGTGACGTACAAACCAAAGTACATTGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR TCA 90 bp ATTACAAGGAAATACAGAAACATTTGGGGACATCCATTGTCTTTCTaGCATCTTCCCACTATGCCTGAGGAATTTCCGGATTTAGAAGCT +
Preference number: 1 (lower is better)
Translates to: ITRKYRNIWGHPLSF*HLPTMPEEFPDLEA
Trigger: AGCTTCTAAATCCGGAAATTCCTCAGGCATAGTGGGAAGATGTCAGAAAGACAATGGATGTCCCCAAATGTTTCTGTATTTCCTTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR TCA 90 bp ATGTACTTTGGTTTGTACGTCACCATGCCGAACAGAGAATTGAACTaGACAGTGCTTGTACATAAATATAGGAAGTATACTGGGTTTCCA +
Preference number: 1 (lower is better)
Translates to: MYFGLYVTMPNRELN*TVLVHKYRKYTGFP
Trigger: TGGAAACCCAGTATACTTCCTATATTTATGTACAAGCACTGTTCAGTTCAATTCTCTGTTCGGCATGGTGACGTACAAACCAAAGTACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR CCA 90 bp ATAAACTTGGATTTCTCAGAGGAAGAATTAGAATCCTCTCTACTTTaGGATCTTGGTAAACTCTTTGGTAAATACCAGAAAGGCACAGCT +
Preference number: 1 (lower is better)
Translates to: INLDFSEEELESSLL*DLGKLFGKYQKGTA
Trigger: AGCTGTGCCTTTCTGGTATTTACCAAAGAGTTTACCAAGATCCCAAAGTAGAGAGGATTCTAATTCTTCCTCTGAGAAATCCAAGTTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR TCA 90 bp ACAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTaGAGGAACCCAAGGTATGAGTTAATTGTTAGCAGTATTTGCTTA +
Preference number: 1 (lower is better)
Translates to: TDEDSYGRKYYRSNT*RNPRYELIVSSICL
Trigger: TAAGCAAATACTGCTAACAATTAACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
3UTR-3UTR CCA 90 bp GCCCTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCCAGGCTCCTACCCACTaGGGATCTTTTGGGGTAATG +
Preference number: 2 (lower is better)
Translates to: ALEDDCPYCCSMYFGLYVQAPTH*GSFGVM
Trigger: CATTACCCCAAAAGATCCCCAGTGGGTAGGAGCCTG...GACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR CCA 90 bp GCCCTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCCTGCATTGTCTTCACTaGCAAAATCATCCAGGTAGG +
Preference number: 2 (lower is better)
Translates to: ALEDDCPYCCSMYFGLYVLHCLH*QNHPGR
Trigger: CCTACCTGGATGATTTTGCCAGTGAAGACAATGCAG...GACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR CCA 90 bp CTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCACCCCACTGGGGATCTTTTaGGGTAATGGTTATGTGATC +
Preference number: 2 (lower is better)
Translates to: LEDDCPYCCSMYFGLYVTPLGIF*GNGYVI
Trigger: GATCACATAACCATTACCCCAAAAGATCCCCAGTGG...GGTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR CCA 90 bp ACACTGTGCCCAGTATCACAGTTAGTCCCAGATATATATGTCTTACAAGCAGTGTCCAAGGGCCACTGCTaGAATGTTGATGAGCCCGAT +
Preference number: 2 (lower is better)
Translates to: TLCPVSQLVPDIYVLQAVSKGHC*NVDEPD
Trigger: ATCGGGCTCATCAACATTCCAGCAGTGGCCCTTGGA...CACTGCTTGTAAGACATATATATCTGGGACTAACTGTGATACTGGGCACAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR TCA 90 bp CTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCACCCTGCAAGAAGACTTATaGTTCCTGCTATTAGATAGC +
Preference number: 2 (lower is better)
Translates to: LEDDCPYCCSMYFGLYVTLQEDL*FLLLDS
Trigger: GCTATCTAATAGCAGGAATCATAAGTCTTCTTGCAG...GGTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR TCA 90 bp ACGAAGAAGATTGCCCAGGAAAACATAAATCCACATGGAAGAGCTAGTGTCCACACTGAAACTGGTAATTaGCTGCTTGACTCTAGGAGA +
Preference number: 2 (lower is better)
Translates to: TKKIAQENINPHGRASVHTETGN*LLDSRR
Trigger: TCTCCTAGAGTCAAGCAGTCAATTACCAGTTTCAGT...GTGGACACTAGCTCTTCCATGTGGATTTATGTTTTCCTGGGCAATCTTCTTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR TCA 90 bp ACACTGTGCCCAGTATCACAGTTAGTCCCAGATATATATGTCTTACAAGCAGTGCATCCATTGTCTTTCTaGCATCTTCCCACTATGCCT +
Preference number: 2 (lower is better)
Translates to: TLCPVSQLVPDIYVLQAVHPLSF*HLPTMP
Trigger: AGGCATAGTGGGAAGATGTCAGAAAGACAATGGATG...CACTGCTTGTAAGACATATATATCTGGGACTAACTGTGATACTGGGCACAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR CCA 90 bp ATTTCCGGATTTAGAAGCTGCAATTCCCACACAAGTGCAGTTGTAAAATATAATGCCCGATCACAAAGTTaGCCCTGGAGGATGACTGTC +
Preference number: 2 (lower is better)
Translates to: ISGFRSCNSHTSAVVKYNARSQS*PWRMTV
Trigger: GACAGTCATCCTCCAGGGCCAACTTTGTGATCGGGC...ATTATATTTTACAACTGCACTTGTGTGGGAATTGCAGCTTCTAAATCCGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR GCA 90 bp AGGAAGTATACTGGGTTTCCAAAAAGATTCTTCAGTGATGGAAGAAAATCTCTTCATCCAGGTAGGCAATaGCCAAAGGCTGAATGGGAG +
Preference number: 2 (lower is better)
Translates to: RKYTGFPKRFFSDGRKSLHPGRQ*PKAEWE
Trigger: CTCCCATTCAGCCTTTGGGCATTGCCTACCTGGATG...AAGAGATTTTCTTCCATCACTGAAGAATCTTTTTGGAAACCCAGTATACTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR GCA 90 bp ACACTGTGCCCAGTATCACAGTTAGTCCCAGATATATATGTCTTACAAGCAGTGGACTGTCCATACTGCTaGTCAATGTACTTTGGTTTG +
Preference number: 2 (lower is better)
Translates to: TLCPVSQLVPDIYVLQAVDCPYC*SMYFGL
Trigger: CAAACCAAAGTACATTGAGCAGCAGTATGGACAGTC...CACTGCTTGTAAGACATATATATCTGGGACTAACTGTGATACTGGGCACAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR GCA 90 bp GGATTCCTGCAAGAACTCTTATTGCTAATGTGTAGATACCCAAGGCAAAAGACTTCCCAAGTAGAGTTTTaGAGCTCCACACACACTGAT +
Preference number: 2 (lower is better)
Translates to: GFLQELLLLMCRYPRQKTSQVEF*SSTHTD
Trigger: ATCAGTGTGTGTGGAGCTGCAAAACTCTACTTGGGA...AGTCTTTTGCCTTGGGTATCTACACATTAGCAATAAGAGTTCTTGCAGGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR CCA 90 bp CTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCACCTGTCAACATATAGTTTaGCACATAATGAGCCTAACA +
Preference number: 2 (lower is better)
Translates to: LEDDCPYCCSMYFGLYVTCQHIV*HIMSLT
Trigger: TGTTAGGCTCATTATGTGCCAAACTATATGTTGACA...GGTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR GCA 90 bp TCCGGATTTAGAAGCTGCAATTCCCACACAAGTGCAGTTGTAAAATATAATATTTATTCCAAGGGCCACTaGTGGAATGTTGATGAGCCC +
Preference number: 2 (lower is better)
Translates to: SGFRSCNSHTSAVVKYNIYSKGH*WNVDEP
Trigger: GGGCTCATCAACATTCCAGCAGTGGCCCTTGGAATA...AATATTATATTTTACAACTGCACTTGTGTGGGAATTGCAGCTTCTAAATCCGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR CCA 90 bp ACACTGTGCCCAGTATCACAGTTAGTCCCAGATATATATGTCTTACAAGCAGTGAAAAGACTTAAGCTGTaGCTTAATGCACCTCAGAAG +
Preference number: 2 (lower is better)
Translates to: TLCPVSQLVPDIYVLQAVKRLKL*LNAPQK
Trigger: CTTCTGAGGTGCATTAAGCCACAGCTTAAGTCTTTT...CACTGCTTGTAAGACATATATATCTGGGACTAACTGTGATACTGGGCACAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR TCA 90 bp ATTTCCGGATTTAGAAGCTGCAATTCCCACACAAGTGCAGTTGTAAAATATAATAAGCTGATACATATGTaGTTCCATTTTCACCGCACA +
Preference number: 2 (lower is better)
Translates to: ISGFRSCNSHTSAVVKYNKLIHM*FHFHRT
Trigger: TGTGCGGTGAAAATGGAATCACATATGTATCAGCTT...ATTATATTTTACAACTGCACTTGTGTGGGAATTGCAGCTTCTAAATCCGGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR CCA 90 bp ATTTCCGGATTTAGAAGCTGCAATTCCCACACAAGTGCAGTTGTAAAATATAATCAGGAAACCAAAGATTaGTCCTATAATTGCAACCGT +
Preference number: 2 (lower is better)
Translates to: ISGFRSCNSHTSAVVKYNQETKD*SYNCNR
Trigger: ACGGTTGCAATTATAGGACCAATCTTTGGTTTCCTG...ATTATATTTTACAACTGCACTTGTGTGGGAATTGCAGCTTCTAAATCCGGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR GCA 72 bp ACAAAGTTGGCCCTGGAGGATGACTGTCCATACTGCTaGTCAATGTACTTTGGTTTGTACGTCACCATGCCG +
Preference number: 3 (lower is better)
Translates to: TKLALEDDCPYC*SMYFGLYVTMP
Trigger: CGGCATGGTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAGGGCCAACTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR CAA 90 bp CTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCACCTTCTCCCTGGGGTGTTaGGTAGTCTGTGTGATCATC +
Preference number: 3 (lower is better)
Translates to: LEDDCPYCCSMYFGLYVTFSLGC*VVCVII
Trigger: GATGATCACACAGACTACCAAACACCCCAGGGAGAA...GGTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR TCA 72 bp GTTGATGAGCCCGATCACAAAGTTGGCCCTGGAGGATaGCTGTCCATACTGCTGCTCAATGTACTTTGGTTT +
Preference number: 3 (lower is better)
Translates to: VDEPDHKVGPGG*LSILLLNVLWF
Trigger: AAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAGGGCCAACTTTGTGATCGGGCTCATCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR CAA 90 bp GTTAGTCCTGCCACATCAGAATTTTCACAGCCCAGTGCAAACAGGGAAAGAAATGCCACTGCTGGAATGTaGATGAGCCCGATCACAAAG +
Preference number: 3 (lower is better)
Translates to: VSPATSEFSQPSANRERNATAGM*MSPITK
Trigger: CTTTGTGATCGGGCTCATCAACATTCCAGCAGTGGC...ATTTCTTTCCCTGTTTGCACTGGGCTGTGAAAATTCTGATGTGGCAGGACTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR GCA 72 bp ATCACAAAGTTGGCCCTGGAGGATGACTGTCCATACTaGTGCTCAATGTACTTTGGTTTGTACGTCACCATG +
Preference number: 3 (lower is better)
Translates to: ITKLALEDDCPY*CSMYFGLYVTM
Trigger: CATGGTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAGGGCCAACTTTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR CCA 72 bp GCACACACCCAATATAGAAAGCTGCATTGTCTTCACTaGCAAAATCATCCAGGTAGGCAATGCCCAAAGGCT +
Preference number: 3 (lower is better)
Translates to: AHTQYRKLHCLH*QNHPGRQCPKA
Trigger: AGCCTTTGGGCATTGCCTACCTGGATGATTTTGCCAGTGAAGACAATGCAGCTTTCTATATTGGGTGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR TCA 72 bp GTAAATACCAGAAAGGCACAGCTGCAAGAAGACTTATaGTTCCTGCTATTAGATAGCCAAGCCACCAGGCTC +
Preference number: 3 (lower is better)
Translates to: VNTRKAQLQEDL*FLLLDSQATRL
Trigger: GAGCCTGGTGGCTTGGCTATCTAATAGCAGGAATCATAAGTCTTCTTGCAGCTGTGCCTTTCTGGTATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR CAA 90 bp GGATTCCTGCAAGAACTCTTATTGCTAATGTGTAGATACCCAAGGCAAAAGACTCTGGTAATTGACTGCTaGACTCTAGGAGACACGGAG +
Preference number: 3 (lower is better)
Translates to: GFLQELLLLMCRYPRQKTLVIDC*TLGDTE
Trigger: CTCCGTGTCTCCTAGAGTCAAGCAGTCAATTACCAG...AGTCTTTTGCCTTGGGTATCTACACATTAGCAATAAGAGTTCTTGCAGGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR CAA 90 bp GTTAGTCCTGCCACATCAGAATTTTCACAGCCCAGTGCAAACAGGGAAAGAAATTCAATGTACTTTGGTTaGTACGTCACCATGCCGAAC +
Preference number: 3 (lower is better)
Translates to: VSPATSEFSQPSANRERNSMYFG*YVTMPN
Trigger: GTTCGGCATGGTGACGTACAAACCAAAGTACATTGA...ATTTCTTTCCCTGTTTGCACTGGGCTGTGAAAATTCTGATGTGGCAGGACTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR GCA 72 bp CACCGCACATGGGTTCCCATTTTGTCTCTGAACATTTaGATCTTGAGTTGCAATCTGAAAAGAGAGCTCGTT +
Preference number: 3 (lower is better)
Translates to: HRTWVPILSLNI*ILSCNLKRELV
Trigger: AACGAGCTCTCTTTTCAGATTGCAACTCAAGATGCAAATGTTCAGAGACAAAATGGGAACCCATGTGCGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR-3UTR CAA 90 bp GTGCCCAGTATCACAGTTAGTCCCAGATATATATGTCTTACAAGCAGTGAAATGCTGCAAGAACTCTTATaGCTAATGTGTAGATACCCA +
Preference number: 3 (lower is better)
Translates to: VPSITVSPRYICLTSSEMLQELL*LMCRYP
Trigger: TGGGTATCTACACATTAGCAATAAGAGTTCTTGCAG...CATTTCACTGCTTGTAAGACATATATATCTGGGACTAACTGTGATACTGGGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR TCA 72 bp ACTTTGGTTTGTACGTCACCATGCCGAACAGAGAATTaGACTGAACAGTGCTTGTACATAAATATAGGAAGT +
Preference number: 3 (lower is better)
Translates to: TLVCTSPCRTEN*TEQCLYINIGS
Trigger: ACTTCCTATATTTATGTACAAGCACTGTTCAGTTCAATTCTCTGTTCGGCATGGTGACGTACAAACCAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR TCA 72 bp GACAGCTATGGGAGAAAATACTATAGGAGTAATACTTaGAGGAACCCAAGGTATGAGTTAATTGTTAGCAGT +
Preference number: 3 (lower is better)
Translates to: DSYGRKYYRSNT*RNPRYELIVSS
Trigger: ACTGCTAACAATTAACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
3UTR-3UTR CAA 90 bp AGGAAGTATACTGGGTTTCCAAAAAGATTCTTCAGTGATGGAAGAAAATCTCTTATGTCAACATATAGTTaGGCACATAATGAGCCTAAC +
Preference number: 3 (lower is better)
Translates to: RKYTGFPKRFFSDGRKSLMSTYS*AHNEPN
Trigger: GTTAGGCTCATTATGTGCCAAACTATATGTTGACAT...AAGAGATTTTCTTCCATCACTGAAGAATCTTTTTGGAAACCCAGTATACTTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539415.5
3UTR CCA 72 bp GATTTCTCAGAGGAAGAATTAGAATCCTCTCTACTTTaGGATCTTGGTAAACTCTTTGGTAAATACCAGAAA +
Preference number: 3 (lower is better)
Translates to: DFSEEELESSLL*DLGKLFGKYQK
Trigger: TTTCTGGTATTTACCAAAGAGTTTACCAAGATCCCAAAGTAGAGAGGATTCTAATTCTTCCTCTGAGAAATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR GCA 90 bp GCCCTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCCATCCAGGTAGGCAATaGCCAAAGGCTGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: ALEDDCPYCCSMYFGLYVHPGRQ*PKAEWE
Trigger: CTCCCATTCAGCCTTTGGGCATTGCCTACCTGGATG...GACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp GTTAGTCCTGCCACATCAGAATTTTCACAGCCCAGTGCAAACAGGGAAAGAAATCAGTCAGCAGAGAATTaGCCACGCTGGCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VSPATSEFSQPSANRERNQSAEN*PRWQGH
Trigger: GTGGCCTTGCCAGCGTGGCCAATTCTCTGCTGACTG...ATTTCTTTCCCTGTTTGCACTGGGCTGTGAAAATTCTGATGTGGCAGGACTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR TCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTCGCTGGCAAGGCCACTaGCGTGCATCTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSRWQGH*RASQLP
Trigger: TGGGAGCTGAGATGCACGTCAGTGGCCTTGCCAGCG...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266509.7
CDS-3UTR TCA 90 bp ACACTGTGCCCAGTATCACAGTTAGTCCCAGATATATATGTCTTACAAGCAGTGGTTGGCCCTGGAGGATaGCTGTCCATACTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TLCPVSQLVPDIYVLQAVVGPGG*LSILLL
Trigger: GAGCAGCAGTATGGACAGTCATCCTCCAGGGCCAAC...CACTGCTTGTAAGACATATATATCTGGGACTAACTGTGATACTGGGCACAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp GTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCACCATGCCGAACAGAGTGCCTGGCCAGTAGTTaGGTTGTAGCAGATGATCAC +
Preference number: 4 (lower is better)
Translates to: VHTAAQCTLVCTSPCRTECLASS*VVADDH
Trigger: GTGATCATCTGCTACAACCCAACTACTGGCCAGGCA...CTCTGTTCGGCATGGTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR GCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTGCAAGGCCACTGACGTaGATCTCAGCTCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSARPLT*ISAPRA
Trigger: TGCCCTGGGAGCTGAGATGCACGTCAGTGGCCTTGC...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266509.7
CDS-3UTR TCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCGCTGGCAAGGCCACTaGCGTGCATCTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSRWQGH*RASQLP
Trigger: TGGGAGCTGAGATGCACGTCAGTGGCCTTGCCAGCG...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539415.5
ENST00000545604.5
CDS-3UTR TCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCGTTGGCCCTGGAGGATaGCTGTCCATACTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTVGPGG*LSILLL
Trigger: GAGCAGCAGTATGGACAGTCATCCTCCAGGGCCAAC...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp CTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCACCGGAGAATTGACACTGTaGCCAGTATCACAGTTAGTC +
Preference number: 4 (lower is better)
Translates to: LEDDCPYCCSMYFGLYVTGELTL*PVSQLV
Trigger: GACTAACTGTGATACTGGGCACAGTGTCAATTCTCC...GGTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTCAGTCAGCAGAGAATTaGCCACGCTGGCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSQSAEN*PRWQGH
Trigger: GTGGCCTTGCCAGCGTGGCCAATTCTCTGCTGACTG...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266509.7
CDS-3UTR CCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAGGTGGGGAGAGTGTaGGTGGACACAAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTQVGRV*VDTSRG
Trigger: TCCTCTGCTTGTGTCCACCCACACTCTCCCCACCTG...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTCAGGTGGGGAGAGTGTaGGTGGACACAAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSQVGRV*VDTSRG
Trigger: TCCTCTGCTTGTGTCCACCCACACTCTCCCCACCTG...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp GCCCTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCACCAGCAAGACAAGCTaGTACATATGTGATTCCATT +
Preference number: 4 (lower is better)
Translates to: ALEDDCPYCCSMYFGLYVTSKTS*YICDSI
Trigger: AATGGAATCACATATGTATCAGCTTGTCTTGCTGGT...GACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR TCA 90 bp CTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCACCTCCCCATTTGAGGCATaGAGTATCAATCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LEDDCPYCCSMYFGLYVTSPFEA*SINQNS
Trigger: GGAGTTTTGATTGATACTTCATGCCTCAAATGGGGA...GGTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp ACGAAGAAGATTGCCCAGGAAAACATAAATCCACATGGAAGAGCTAGTGTCCACTCACAAAGTTGGCCCTaGAGGATGACTGTCCATACT +
Preference number: 4 (lower is better)
Translates to: TKKIAQENINPHGRASVHSQSWP*RMTVHT
Trigger: AGTATGGACAGTCATCCTCCAGGGCCAACTTTGTGA...GTGGACACTAGCTCTTCCATGTGGATTTATGTTTTCCTGGGCAATCTTCTTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTGCCCGATCACAAAGTTaGCCCTGGAGGATGACTGTC +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSARSQS*PWRMTV
Trigger: GACAGTCATCCTCCAGGGCCAACTTTGTGATCGGGC...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp CTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCACCAAAATACACTGGAGCTaGGATTCCTGCAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: LEDDCPYCCSMYFGLYVTKIHWS*DSCKNS
Trigger: AGAGTTCTTGCAGGAATCCCAGCTCCAGTGTATTTT...GGTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp GATTTCTCAGAGGAAGAATTAGAATCCTCTCTACTTTGGGATCTTGGTAAACTCTGCTCAGCAAGAGGATaGACCACACACCACAGACCC +
Preference number: 4 (lower is better)
Translates to: DFSEEELESSLLWDLGKLCSARG*TTHHRP
Trigger: GGGTCTGTGGTGTGTGGTCCATCCTCTTGCTGAGCA...GAGTTTACCAAGATCCCAAAGTAGAGAGGATTCTAATTCTTCCTCTGAGAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR TCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGTTGGCCCTGGAGGATaGCTGTCCATACTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSVGPGG*LSILLL
Trigger: GAGCAGCAGTATGGACAGTCATCCTCCAGGGCCAAC...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp ACGAAGAAGATTGCCCAGGAAAACATAAATCCACATGGAAGAGCTAGTGTCCACTCTTCCCACTATGCCTaGGGAATTTCCGGATTTAGA +
Preference number: 4 (lower is better)
Translates to: TKKIAQENINPHGRASVHSSHYA*GISGFR
Trigger: TCTAAATCCGGAAATTCCTCAGGCATAGTGGGAAGA...GTGGACACTAGCTCTTCCATGTGGATTTATGTTTTCCTGGGCAATCTTCTTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR TCA 90 bp GCCCTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCAGCAGTGAAATGACATaGAAACTTGTTAGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: ALEDDCPYCCSMYFGLYVSSEMT*KLVSVS
Trigger: ACTGACACTAACAAGTTTTCATGTCATTTCACTGCT...GACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR GCA 90 bp AATATAGAAAGCTGCATTGTCTTCACTGGCAAAATCATCCAGGTAGGCAATGCCCAGTTCCTTTCAATGTaGTCAGCAAGAGGATGGACC +
Preference number: 4 (lower is better)
Translates to: NIESCIVFTGKIIQVGNAQFLSM*SARGWT
Trigger: GGTCCATCCTCTTGCTGAGCACATTGAAAGGAACTG...GGCATTGCCTACCTGGATGATTTTGCCAGTGAAGACAATGCAGCTTTCTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR GCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCATCCAGGTAGGCAATaGCCAAAGGCTGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTHPGRQ*PKAEWE
Trigger: CTCCCATTCAGCCTTTGGGCATTGCCTACCTGGATG...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp AATATAGAAAGCTGCATTGTCTTCACTGGCAAAATCATCCAGGTAGGCAATGCCGATTGGTCCTATAATTaGAACCGTCTGCACACACCC +
Preference number: 4 (lower is better)
Translates to: NIESCIVFTGKIIQVGNADWSYN*NRLHTP
Trigger: GGGTGTGTGCAGACGGTTGCAATTATAGGACCAATC...GGCATTGCCTACCTGGATGATTTTGCCAGTGAAGACAATGCAGCTTTCTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR GCA 90 bp GCCCTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCTTGTCTCTGAACATTTaGATCTTGAGTTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: ALEDDCPYCCSMYFGLYVLSLNI*ILSCNL
Trigger: CAGATTGCAACTCAAGATGCAAATGTTCAGAGACAA...GACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR GCA 90 bp GTTAGTCCTGCCACATCAGAATTTTCACAGCCCAGTGCAAACAGGGAAAGAAATGACATCTTCCCACTATaGCTGAGGAATTTCCGGATT +
Preference number: 4 (lower is better)
Translates to: VSPATSEFSQPSANRERNDIFPL*LRNFRI
Trigger: AATCCGGAAATTCCTCAGGCATAGTGGGAAGATGTC...ATTTCTTTCCCTGTTTGCACTGGGCTGTGAAAATTCTGATGTGGCAGGACTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCCAGTCAGCAGAGAATTaGCCACGCTGGCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFQSAEN*PRWQGH
Trigger: GTGGCCTTGCCAGCGTGGCCAATTCTCTGCTGACTG...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539415.5
ENST00000545604.5
CDS-3UTR CCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCTGGGGAGAGTGTGGGTaGACACAAGCAGAGGAGATT +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTWGECG*TQAEEI
Trigger: AATCTCCTCTGCTTGTGTCCACCCACACTCTCCCCA...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTTGCTCAGCAAGAGGATaGACCACACACCACAGACTG +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSCSARG*TTHHRL
Trigger: CAGTCTGTGGTGTGTGGTCCATCCTCTTGCTGAGCA...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp GATTTCTCAGAGGAAGAATTAGAATCCTCTCTACTTTGGGATCTTGGTAAACTCCAGGCTCCTACCCACTaGGGATCTTTTGGGGTAATG +
Preference number: 4 (lower is better)
Translates to: DFSEEELESSLLWDLGKLQAPTH*GSFGVM
Trigger: CATTACCCCAAAAGATCCCCAGTGGGTAGGAGCCTG...GAGTTTACCAAGATCCCAAAGTAGAGAGGATTCTAATTCTTCCTCTGAGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAGGCTCCTACCCACTaGGGATCTTTTGGGGTAATG +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTQAPTH*GSFGVM
Trigger: CATTACCCCAAAAGATCCCCAGTGGGTAGGAGCCTG...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTTCCAAGGGCCACTGCTaGAATGTTGATGAGCCCGAT +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSSKGHC*NVDEPD
Trigger: ATCGGGCTCATCAACATTCCAGCAGTGGCCCTTGGA...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCTCCAAGGGCCACTGCTaGAATGTTGATGAGCCCGAT +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTSKGHC*NVDEPD
Trigger: ATCGGGCTCATCAACATTCCAGCAGTGGCCCTTGGA...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
3UTR CAA 72 bp TCACCGCACATGGGTTCCCATTTTGTCTCTGAACATTaGCATCTTGAGTTGCAATCTGAAAAGAGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: SPHMGSHFVSEH*HLELQSEKRAR
Trigger: ACGAGCTCTCTTTTCAGATTGCAACTCAAGATGCAAATGTTCAGAGACAAAATGGGAACCCATGTGCGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR TCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCAGGGAAAAGAAAAGATaGAGGGCATGGTCTCACCCC +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTREKKR*RAWSHP
Trigger: GGGGTGAGACCATGCCCTTCATCTTTTCTTTTCCCT...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTGTGTTCCAACTCCCATaGTTACACACCCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSVFQLP*LHTLLQ
Trigger: TTGGAGCAGGGTGTGTAATCATGGGAGTTGGAACAC...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTACTGAGGCATTGCAATaGGCAGTGTTCCAACTCCCA +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSTEALQ*AVFQLP
Trigger: TGGGAGTTGGAACACTGCTCATTGCAATGCCTCAGT...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp ACACTGTGCCCAGTATCACAGTTAGTCCCAGATATATATGTCTTACAAGCAGTGTGCCGAACAGAGAATTaGACTGAACAGTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: TLCPVSQLVPDIYVLQAVCRTEN*TEQCLY
Trigger: GTACAAGCACTGTTCAGTTCAATTCTCTGTTCGGCA...CACTGCTTGTAAGACATATATATCTGGGACTAACTGTGATACTGGGCACAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR TCA 90 bp GAATTAGAATCCTCTCTACTTTGGGATCTTGGTAAACTCTTTGGTAAATACCAGACACACCACAGACCCTaGGCGATCTCTTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: ELESSLLWDLGKLFGKYQTHHRP*AISSLS
Trigger: GGAAAGAGAAGAGATCGCTCAGGGTCTGTGGTGTGT...CTGGTATTTACCAAAGAGTTTACCAAGATCCCAAAGTAGAGAGGATTCTAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR GCA 90 bp ACGAAGAAGATTGCCCAGGAAAACATAAATCCACATGGAAGAGCTAGTGTCCACGATGACTGTCCATACTaGTGCTCAATGTACTTTGGT +
Preference number: 4 (lower is better)
Translates to: TKKIAQENINPHGRASVHDDCPY*CSMYFG
Trigger: ACCAAAGTACATTGAGCAGCAGTATGGACAGTCATC...GTGGACACTAGCTCTTCCATGTGGATTTATGTTTTCCTGGGCAATCTTCTTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR GCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCTATTCCAAGGGCCACTaGTGGAATGTTGATGAGCCC +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTYSKGH*WNVDEP
Trigger: GGGCTCATCAACATTCCAGCAGTGGCCCTTGGAATA...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp AGTTTGGCACATAATGAGCCTAACAGGAAACCAAAGATTGGTCCTATAATTGCATATTCCAAGGGCCACTaGTGGAATGTTGATGAGCCC +
Preference number: 4 (lower is better)
Translates to: SLAHNEPNRKPKIGPIIAYSKGH*WNVDEP
Trigger: GGGCTCATCAACATTCCAGCAGTGGCCCTTGGAATA...TGCAATTATAGGACCAATCTTTGGTTTCCTGTTAGGCTCATTATGTGCCAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR GCA 90 bp ACACTGTGCCCAGTATCACAGTTAGTCCCAGATATATATGTCTTACAAGCAGTGAAAGTTGAGTTTCCTTaGCTGGCCAGTAGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: TLCPVSQLVPDIYVLQAVKVEFP*LASSWV
Trigger: AACCCAACTACTGGCCAGGCAAGGAAACTCAACTTT...CACTGCTTGTAAGACATATATATCTGGGACTAACTGTGATACTGGGCACAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp ACACTGTGCCCAGTATCACAGTTAGTCCCAGATATATATGTCTTACAAGCAGTGCTGCATTGTCTTCACTaGCAAAATCATCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: TLCPVSQLVPDIYVLQAVLHCLH*QNHPGR
Trigger: CCTACCTGGATGATTTTGCCAGTGAAGACAATGCAG...CACTGCTTGTAAGACATATATATCTGGGACTAACTGTGATACTGGGCACAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp AATATAGAAAGCTGCATTGTCTTCACTGGCAAAATCATCCAGGTAGGCAATGCCCCACTGGGGATCTTTTaGGGTAATGGTTATGTGATC +
Preference number: 4 (lower is better)
Translates to: NIESCIVFTGKIIQVGNAPLGIF*GNGYVI
Trigger: GATCACATAACCATTACCCCAAAAGATCCCCAGTGG...GGCATTGCCTACCTGGATGATTTTGCCAGTGAAGACAATGCAGCTTTCTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp AGGAAGTATACTGGGTTTCCAAAAAGATTCTTCAGTGATGGAAGAAAATCTCTTGCCCGATCACAAAGTTaGCCCTGGAGGATGACTGTC +
Preference number: 4 (lower is better)
Translates to: RKYTGFPKRFFSDGRKSLARSQS*PWRMTV
Trigger: GACAGTCATCCTCCAGGGCCAACTTTGTGATCGGGC...AAGAGATTTTCTTCCATCACTGAAGAATCTTTTTGGAAACCCAGTATACTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCGCCCGATCACAAAGTTaGCCCTGGAGGATGACTGTC +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFARSQS*PWRMTV
Trigger: GACAGTCATCCTCCAGGGCCAACTTTGTGATCGGGC...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTTGCCTGGCCAGTAGTTaGGTTGTAGCAGATGATCAC +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSCLASS*VVADDH
Trigger: GTGATCATCTGCTACAACCCAACTACTGGCCAGGCA...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGCTCAGCAAGAGGATaGACCACACACCACAGACCC +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFCSARG*TTHHRP
Trigger: GGGTCTGTGGTGTGTGGTCCATCCTCTTGCTGAGCA...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539415.5
ENST00000545604.5
CDS-3UTR TCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTTGCTCCATGAAGAACTaGGGCATTGCAATGAGCAGT +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSCSMKN*GIAMSS
Trigger: ACTGCTCATTGCAATGCCTCAGTTCTTCATGGAGCA...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp ACACTGTGCCCAGTATCACAGTTAGTCCCAGATATATATGTCTTACAAGCAGTGACTGAAACTGGTAATTaGCTGCTTGACTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: TLCPVSQLVPDIYVLQAVTETGN*LLDSRR
Trigger: TCTCCTAGAGTCAAGCAGTCAATTACCAGTTTCAGT...CACTGCTTGTAAGACATATATATCTGGGACTAACTGTGATACTGGGCACAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR TCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCACACACCACAGACCCTaGGCGATCTCTTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFTHHRP*AISSLS
Trigger: GGAAAGAGAAGAGATCGCTCAGGGTCTGTGGTGTGT...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539415.5
ENST00000545604.5
CDS-3UTR GCA 90 bp ACGAAGAAGATTGCCCAGGAAAACATAAATCCACATGGAAGAGCTAGTGTCCACTTCTTTGCAATTTGCTaGAAGTTTAAGGCCACACGT +
Preference number: 4 (lower is better)
Translates to: TKKIAQENINPHGRASVHFFAIC*KFKATR
Trigger: ACGTGTGGCCTTAAACTTGCAGCAAATTGCAAAGAA...GTGGACACTAGCTCTTCCATGTGGATTTATGTTTTCCTGGGCAATCTTCTTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR GCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCTCACCACAGCATGGTTaGTTTTCTTCTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTSPQHG*FSSEEG
Trigger: TCCCTCCTCAGAAGAAAAGCAACCATGCTGTGGTGA...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266509.7
CDS-3UTR GCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCATCCAGGTAGGCAATaGCCAAAGGCTGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSHPGRQ*PKAEWE
Trigger: CTCCCATTCAGCCTTTGGGCATTGCCTACCTGGATG...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCCATCCAGGTAGGCAATaGCCAAAGGCTGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFHPGRQ*PKAEWE
Trigger: CTCCCATTCAGCCTTTGGGCATTGCCTACCTGGATG...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTGATTGGTCCTATAATTaGAACCGTCTGCACACACCC +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSDWSYN*NRLHTP
Trigger: GGGTGTGTGCAGACGGTTGCAATTATAGGACCAATC...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCGATTGGTCCTATAATTaGAACCGTCTGCACACACCC +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTDWSYN*NRLHTP
Trigger: GGGTGTGTGCAGACGGTTGCAATTATAGGACCAATC...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp GATTGGTCCTATAATTGCAACCGTCTGCACACACCCAATATAGAAAGCTGCATTGACTGTCCATACTGCTaGTCAATGTACTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: DWSYNCNRLHTPNIESCIDCPYC*SMYFGL
Trigger: CAAACCAAAGTACATTGAGCAGCAGTATGGACAGTC...AATGCAGCTTTCTATATTGGGTGTGTGCAGACGGTTGCAATTATAGGACCAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR GCA 90 bp GGATTCCTGCAAGAACTCTTATTGCTAATGTGTAGATACCCAAGGCAAAAGACTTCCGGATTTAGAAGCTaGAATTCCCACACAAGTGCA +
Preference number: 4 (lower is better)
Translates to: GFLQELLLLMCRYPRQKTSGFRS*NSHTSA
Trigger: TGCACTTGTGTGGGAATTGCAGCTTCTAAATCCGGA...AGTCTTTTGCCTTGGGTATCTACACATTAGCAATAAGAGTTCTTGCAGGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCTGGGGAGAGTGTGGGTaGACACAAGCAGAGGAGATT +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYIWGECG*TQAEEI
Trigger: AATCTCCTCTGCTTGTGTCCACCCACACTCTCCCCA...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGCTCAGCAAGAGGATaGACCACACACCACAGACTG +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFCSARG*TTHHRL
Trigger: CAGTCTGTGGTGTGTGGTCCATCCTCTTGCTGAGCA...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545102.1
CDS-3UTR CCA 90 bp ACGAAGAAGATTGCCCAGGAAAACATAAATCCACATGGAAGAGCTAGTGTCCACTCCTTGACTCTGATCTaGAGGAAGAGATCAAAGATA +
Preference number: 4 (lower is better)
Translates to: TKKIAQENINPHGRASVHSLTLI*RKRSKI
Trigger: TATCTTTGATCTCTTCCTCCAGATCAGAGTCAAGGA...GTGGACACTAGCTCTTCCATGTGGATTTATGTTTTCCTGGGCAATCTTCTTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCCAGGCTCCTACCCACTaGGGATCTTTTGGGGTAATG +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYIQAPTH*GSFGVM
Trigger: CATTACCCCAAAAGATCCCCAGTGGGTAGGAGCCTG...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCCAGGCTCCTACCCACTaGGGATCTTTTGGGGTAATG +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFQAPTH*GSFGVM
Trigger: CATTACCCCAAAAGATCCCCAGTGGGTAGGAGCCTG...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCTCACAAAGTTGGCCCTaGAGGATGACTGTCCATACT +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTSQSWP*RMTVHT
Trigger: AGTATGGACAGTCATCCTCCAGGGCCAACTTTGTGA...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp AGGAAGTATACTGGGTTTCCAAAAAGATTCTTCAGTGATGGAAGAAAATCTCTTTCCAAGGGCCACTGCTaGAATGTTGATGAGCCCGAT +
Preference number: 4 (lower is better)
Translates to: RKYTGFPKRFFSDGRKSLSKGHC*NVDEPD
Trigger: ATCGGGCTCATCAACATTCCAGCAGTGGCCCTTGGA...AAGAGATTTTCTTCCATCACTGAAGAATCTTTTTGGAAACCCAGTATACTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCCAAGGGCCACTGCTaGAATGTTGATGAGCCCGAT +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFSKGHC*NVDEPD
Trigger: ATCGGGCTCATCAACATTCCAGCAGTGGCCCTTGGA...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTTTCTCTCTATCTGAGTaGTGGTGCTCTTCAGATAGC +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSFSLSE*WCSSDS
Trigger: GCTATCTGAAGAGCACCATCACTCAGATAGAGAGAA...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266509.7
CDS-3UTR TCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCAACCTTCTCTCTATCTaGGTGATGGTGCTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTNLLSI*VMVLFR
Trigger: TCTGAAGAGCACCATCACTCAGATAGAGAGAAGGTT...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266509.7
CDS-3UTR TCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGTGTTCCAACTCCCATaGTTACACACCCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSVFQLP*LHTLLQ
Trigger: TTGGAGCAGGGTGTGTAATCATGGGAGTTGGAACAC...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCGTGTTCCAACTCCCATaGTTACACACCCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFVFQLP*LHTLLQ
Trigger: TTGGAGCAGGGTGTGTAATCATGGGAGTTGGAACAC...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTACTGAGGCATTGCAATaGGCAGTGTTCCAACTCCCA +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSTEALQ*AVFQLP
Trigger: TGGGAGTTGGAACACTGCTCATTGCAATGCCTCAGT...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCTCTTCCCACTATGCCTaGGGAATTTCCGGATTTAGA +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTSSHYA*GISGFR
Trigger: TCTAAATCCGGAAATTCCTCAGGCATAGTGGGAAGA...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTCATCCATTGTCTTTCTaGCATCTTCCCACTATGCCT +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSHPLSF*HLPTMP
Trigger: AGGCATAGTGGGAAGATGTCAGAAAGACAATGGATG...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCGAAGAACTGAGGCATTaGAATGAGCAGTGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTEELRH*NEQCSN
Trigger: GTTGGAACACTGCTCATTGCAATGCCTCAGTTCTTC...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTATTCCAAGGGCCACTaGTGGAATGTTGATGAGCCC +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFYSKGH*WNVDEP
Trigger: GGGCTCATCAACATTCCAGCAGTGGCCCTTGGAATA...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp AGTTTGGCACATAATGAGCCTAACAGGAAACCAAAGATTGGTCCTATAATTGCATCCCAAGTAGAGTTTTaGAGCTCCACACACACTGAT +
Preference number: 4 (lower is better)
Translates to: SLAHNEPNRKPKIGPIIASQVEF*SSTHTD
Trigger: ATCAGTGTGTGTGGAGCTGCAAAACTCTACTTGGGA...TGCAATTATAGGACCAATCTTTGGTTTCCTGTTAGGCTCATTATGTGCCAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR GCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTTCCGGATTTAGAAGCTaGAATTCCCACACAAGTGCA +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSSGFRS*NSHTSA
Trigger: TGCACTTGTGTGGGAATTGCAGCTTCTAAATCCGGA...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTGACATCTTCCCACTATaGCTGAGGAATTTCCGGATT +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSDIFPL*LRNFRI
Trigger: AATCCGGAAATTCCTCAGGCATAGTGGGAAGATGTC...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCGACATCTTCCCACTATaGCTGAGGAATTTCCGGATT +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTDIFPL*LRNFRI
Trigger: AATCCGGAAATTCCTCAGGCATAGTGGGAAGATGTC...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCAAAGTTGAGTTTCCTTaGCTGGCCAGTAGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTKVEFP*LASSWV
Trigger: AACCCAACTACTGGCCAGGCAAGGAAACTCAACTTT...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp GGATTCCTGCAAGAACTCTTATTGCTAATGTGTAGATACCCAAGGCAAAAGACTGCTGTAGCAATGAGATaGGGGAATGCTTTTGATTTG +
Preference number: 4 (lower is better)
Translates to: GFLQELLLLMCRYPRQKTAVAMR*GNAFDL
Trigger: CAAATCAAAAGCATTCCCGCATCTCATTGCTACAGC...AGTCTTTTGCCTTGGGTATCTACACATTAGCAATAAGAGTTCTTGCAGGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCTGCATTGTCTTCACTaGCAAAATCATCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTLHCLH*QNHPGR
Trigger: CCTACCTGGATGATTTTGCCAGTGAAGACAATGCAG...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTCCACTGGGGATCTTTTaGGGTAATGGTTATGTGATC +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSPLGIF*GNGYVI
Trigger: GATCACATAACCATTACCCCAAAAGATCCCCAGTGG...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp ACGAAGAAGATTGCCCAGGAAAACATAAATCCACATGGAAGAGCTAGTGTCCACGAATCCTCTCTACTTTaGGATCTTGGTAAACTCTTT +
Preference number: 4 (lower is better)
Translates to: TKKIAQENINPHGRASVHESSLL*DLGKLF
Trigger: AAAGAGTTTACCAAGATCCCAAAGTAGAGAGGATTC...GTGGACACTAGCTCTTCCATGTGGATTTATGTTTTCCTGGGCAATCTTCTTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTCTGCTCAATGTACTTTaGTTTGTACGTCACCATGCC +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSLLNVL*FVRHHA
Trigger: GGCATGGTGACGTACAAACCAAAGTACATTGAGCAG...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTCATTTTCACCGCACATaGGTTCCCATTTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSHFHRT*VPILSL
Trigger: CAGAGACAAAATGGGAACCCATGTGCGGTGAAAATG...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp GATTTCTCAGAGGAAGAATTAGAATCCTCTCTACTTTGGGATCTTGGTAAACTCAACTCCAAAATACACTaGAGCTGGGATTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: DFSEEELESSLLWDLGKLNSKIH*SWDSCK
Trigger: CTTGCAGGAATCCCAGCTCCAGTGTATTTTGGAGTT...GAGTTTACCAAGATCCCAAAGTAGAGAGGATTCTAATTCTTCCTCTGAGAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCAACTCCAAAATACACTaGAGCTGGGATTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTNSKIH*SWDSCK
Trigger: CTTGCAGGAATCCCAGCTCCAGTGTATTTTGGAGTT...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTTGCCTGGCCAGTAGTTaGGTTGTAGCAGATGATCAC +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSCLASS*VVADDH
Trigger: GTGATCATCTGCTACAACCCAACTACTGGCCAGGCA...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTTGCTCCATGAAGAACTaGGGCATTGCAATGAGCAGT +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSCSMKN*GIAMSS
Trigger: ACTGCTCATTGCAATGCCTCAGTTCTTCATGGAGCA...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGCTCCATGAAGAACTaGGGCATTGCAATGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFCSMKN*GIAMSS
Trigger: ACTGCTCATTGCAATGCCTCAGTTCTTCATGGAGCA...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTATTTGTACTGCTCCATaGAGAACTGAGGCATTGCAA +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSICTAP*RTEALQ
Trigger: TTGCAATGCCTCAGTTCTTCATGGAGCAGTACAAAT...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCATTTGTACTGCTCCATaGAGAACTGAGGCATTGCAA +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTICTAP*RTEALQ
Trigger: TTGCAATGCCTCAGTTCTTCATGGAGCAGTACAAAT...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCACTGAAACTGGTAATTaGCTGCTTGACTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTTETGN*LLDSRR
Trigger: TCTCCTAGAGTCAAGCAGTCAATTACCAGTTTCAGT...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCTCCCCATTTGAGGCATaGAGTATCAATCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTSPFEA*SINQNS
Trigger: GGAGTTTTGATTGATACTTCATGCCTCAAATGGGGA...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCCAGTTCCTTTCAATGTaGTCAGCAAGAGGATGGACC +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYIQFLSM*SARGWT
Trigger: GGTCCATCCTCTTGCTGAGCACATTGAAAGGAACTG...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCAGTTCCTTTCAATGTaGTCAGCAAGAGGATGGACC +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSQFLSM*SARGWT
Trigger: GGTCCATCCTCTTGCTGAGCACATTGAAAGGAACTG...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCGGCCTTCCAACAGGTTaGACTGAAGTTTTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYIGLPTG*TEVLQN
Trigger: GTTCTGCAAAACTTCAGTGCAACCTGTTGGAAGGCC...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266509.7
CDS-3UTR GCA 90 bp ATTTCCGGATTTAGAAGCTGCAATTCCCACACAAGTGCAGTTGTAAAATATAATGGCCTTCCAACAGGTTaGACTGAAGTTTTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: ISGFRSCNSHTSAVVKYNGLPTG*TEVLQN
Trigger: GTTCTGCAAAACTTCAGTGCAACCTGTTGGAAGGCC...ATTATATTTTACAACTGCACTTGTGTGGGAATTGCAGCTTCTAAATCCGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR GCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGGCCTTCCAACAGGTTaGACTGAAGTTTTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSGLPTG*TEVLQN
Trigger: GTTCTGCAAAACTTCAGTGCAACCTGTTGGAAGGCC...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539415.5
ENST00000545604.5
CDS-3UTR GCA 90 bp ATTTCCGGATTTAGAAGCTGCAATTCCCACACAAGTGCAGTTGTAAAATATAATTCACCACAGCATGGTTaGTTTTCTTCTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: ISGFRSCNSHTSAVVKYNSPQHG*FSSEEG
Trigger: TCCCTCCTCAGAAGAAAAGCAACCATGCTGTGGTGA...ATTATATTTTACAACTGCACTTGTGTGGGAATTGCAGCTTCTAAATCCGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR GCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCACCACAGCATGGTTaGTTTTCTTCTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFSPQHG*FSSEEG
Trigger: TCCCTCCTCAGAAGAAAAGCAACCATGCTGTGGTGA...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539415.5
ENST00000545604.5
CDS-3UTR GCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCTTCAGATAGCCTTCTaGCAATGCTTTGGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTLQIAF*QCFGKV
Trigger: TACTTTGCCAAAGCATTGGCAGAAGGCTATCTGAAG...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266509.7
CDS-3UTR GCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGATTGGTCCTATAATTaGAACCGTCTGCACACACCC +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSDWSYN*NRLHTP
Trigger: GGGTGTGTGCAGACGGTTGCAATTATAGGACCAATC...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCGACTGTCCATACTGCTaGTCAATGTACTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTDCPYC*SMYFGL
Trigger: CAAACCAAAGTACATTGAGCAGCAGTATGGACAGTC...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTGACTGTCCATACTGCTaGTCAATGTACTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSDCPYC*SMYFGL
Trigger: CAAACCAAAGTACATTGAGCAGCAGTATGGACAGTC...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp AATATAGAAAGCTGCATTGTCTTCACTGGCAAAATCATCCAGGTAGGCAATGCCATATGTATCCAGGTATaGCACCTAGGGATAAAGTAT +
Preference number: 4 (lower is better)
Translates to: NIESCIVFTGKIIQVGNAICIQV*HLGIKY
Trigger: ATACTTTATCCCTAGGTGGCATACCTGGATACATAT...GGCATTGCCTACCTGGATGATTTTGCCAGTGAAGACAATGCAGCTTTCTATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTTCACAAAGTTGGCCCTaGAGGATGACTGTCCATACT +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSSQSWP*RMTVHT
Trigger: AGTATGGACAGTCATCCTCCAGGGCCAACTTTGTGA...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTAAAATACACTGGAGCTaGGATTCCTGCAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSKIHWS*DSCKNS
Trigger: AGAGTTCTTGCAGGAATCCCAGCTCCAGTGTATTTT...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp GTTAGTCCTGCCACATCAGAATTTTCACAGCCCAGTGCAAACAGGGAAAGAAATGGAATGCTTTTGATTTaGTACCTGAAGACATTTGAA +
Preference number: 4 (lower is better)
Translates to: VSPATSEFSQPSANRERNGMLLI*YLKTFE
Trigger: TTCAAATGTCTTCAGGTACCAAATCAAAAGCATTCC...ATTTCTTTCCCTGTTTGCACTGGGCTGTGAAAATTCTGATGTGGCAGGACTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR TCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCACTCCACAGCAATTTTaGACAATTTTGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYITPQQF*TILPGG
Trigger: CCCACCTGGCAAAATTGTTCAAAATTGCTGTGGAGT...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTTCTCTCTATCTGAGTaGTGGTGCTCTTCAGATAGC +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFFSLSE*WCSSDS
Trigger: GCTATCTGAAGAGCACCATCACTCAGATAGAGAGAA...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545604.5
CDS-3UTR TCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTAACCTTCTCTCTATCTaGGTGATGGTGCTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSNLLSI*VMVLFR
Trigger: TCTGAAGAGCACCATCACTCAGATAGAGAGAAGGTT...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545604.5
CDS-3UTR TCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCTGCAAGAAGACTTATaGTTCCTGCTATTAGATAGC +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTLQEDL*FLLLDS
Trigger: GCTATCTAATAGCAGGAATCATAAGTCTTCTTGCAG...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCTGCCGAACAGAGAATTaGACTGAACAGTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYICRTEN*TEQCLY
Trigger: GTACAAGCACTGTTCAGTTCAATTCTCTGTTCGGCA...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGCCGAACAGAGAATTaGACTGAACAGTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFCRTEN*TEQCLY
Trigger: GTACAAGCACTGTTCAGTTCAATTCTCTGTTCGGCA...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCAAGCTGATACATATGTaGTTCCATTTTCACCGCACA +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTKLIHM*FHFHRT
Trigger: TGTGCGGTGAAAATGGAATCACATATGTATCAGCTT...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp AGTTTGGCACATAATGAGCCTAACAGGAAACCAAAGATTGGTCCTATAATTGCAAAGCTGATACATATGTaGTTCCATTTTCACCGCACA +
Preference number: 4 (lower is better)
Translates to: SLAHNEPNRKPKIGPIIAKLIHM*FHFHRT
Trigger: TGTGCGGTGAAAATGGAATCACATATGTATCAGCTT...TGCAATTATAGGACCAATCTTTGGTTTCCTGTTAGGCTCATTATGTGCCAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR TCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTAAGCTGATACATATGTaGTTCCATTTTCACCGCACA +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSKLIHM*FHFHRT
Trigger: TGTGCGGTGAAAATGGAATCACATATGTATCAGCTT...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCACCAGCAAGACAAGCTaGTACATATGTGATTCCATT +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTTSKTS*YICDSI
Trigger: AATGGAATCACATATGTATCAGCTTGTCTTGCTGGT...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCTCTTCCCACTATGCCTaGGGAATTTCCGGATTTAGA +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYISSHYA*GISGFR
Trigger: TCTAAATCCGGAAATTCCTCAGGCATAGTGGGAAGA...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCTTCCCACTATGCCTaGGGAATTTCCGGATTTAGA +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFSSHYA*GISGFR
Trigger: TCTAAATCCGGAAATTCCTCAGGCATAGTGGGAAGA...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp TCCGGATTTAGAAGCTGCAATTCCCACACAAGTGCAGTTGTAAAATATAATATTCATCCATTGTCTTTCTaGCATCTTCCCACTATGCCT +
Preference number: 4 (lower is better)
Translates to: SGFRSCNSHTSAVVKYNIHPLSF*HLPTMP
Trigger: AGGCATAGTGGGAAGATGTCAGAAAGACAATGGATG...AATATTATATTTTACAACTGCACTTGTGTGGGAATTGCAGCTTCTAAATCCGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR TCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCCATCCATTGTCTTTCTaGCATCTTCCCACTATGCCT +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYIHPLSF*HLPTMP
Trigger: AGGCATAGTGGGAAGATGTCAGAAAGACAATGGATG...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCATCCATTGTCTTTCTaGCATCTTCCCACTATGCCT +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSHPLSF*HLPTMP
Trigger: AGGCATAGTGGGAAGATGTCAGAAAGACAATGGATG...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGAAGAACTGAGGCATTaGAATGAGCAGTGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSEELRH*NEQCSN
Trigger: GTTGGAACACTGCTCATTGCAATGCCTCAGTTCTTC...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCTCCCAAGTAGAGTTTTaGAGCTCCACACACACTGAT +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYISQVEF*SSTHTD
Trigger: ATCAGTGTGTGTGGAGCTGCAAAACTCTACTTGGGA...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCCCAAGTAGAGTTTTaGAGCTCCACACACACTGAT +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFSQVEF*SSTHTD
Trigger: ATCAGTGTGTGTGGAGCTGCAAAACTCTACTTGGGA...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCCGGATTTAGAAGCTaGAATTCCCACACAAGTGCA +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFSGFRS*NSHTSA
Trigger: TGCACTTGTGTGGGAATTGCAGCTTCTAAATCCGGA...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGACATCTTCCCACTATaGCTGAGGAATTTCCGGATT +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSDIFPL*LRNFRI
Trigger: AATCCGGAAATTCCTCAGGCATAGTGGGAAGATGTC...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCGGAGAATTGACACTGTaGCCAGTATCACAGTTAGTC +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYIGELTL*PVSQLV
Trigger: GACTAACTGTGATACTGGGCACAGTGTCAATTCTCC...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCGGAGAATTGACACTGTaGCCAGTATCACAGTTAGTC +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFGELTL*PVSQLV
Trigger: GACTAACTGTGATACTGGGCACAGTGTCAATTCTCC...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTAAAGTTGAGTTTCCTTaGCTGGCCAGTAGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSKVEFP*LASSWV
Trigger: AACCCAACTACTGGCCAGGCAAGGAAACTCAACTTT...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCTTCCTCTCCATGTTCTaGTCCATCCTAAGATCATTA +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTFLSMF*SILRSL
Trigger: TAATGATCTTAGGATGGAGCAGAACATGGAGAGGAA...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGTGTAAATCTGGGATaGTGTAGCAATGAGATGCGG +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFCVNLG*CSNEMR
Trigger: CCGCATCTCATTGCTACAGCATCCCAGATTTACACA...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCTGTGTAAATCTGGGATaGTGTAGCAATGAGATGCGG +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYICVNLG*CSNEMR
Trigger: CCGCATCTCATTGCTACAGCATCCCAGATTTACACA...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545102.1
CDS-3UTR GCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTTGTGTAAATCTGGGATaGTGTAGCAATGAGATGCGG +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSCVNLG*CSNEMR
Trigger: CCGCATCTCATTGCTACAGCATCCCAGATTTACACA...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCTCCTTGACTCTGATCTaGAGGAAGAGATCAAAGATA +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTSLTLI*RKRSKI
Trigger: TATCTTTGATCTCTTCCTCCAGATCAGAGTCAAGGA...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266509.7
CDS-3UTR CCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCCTGCATTGTCTTCACTaGCAAAATCATCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYILHCLH*QNHPGR
Trigger: CCTACCTGGATGATTTTGCCAGTGAAGACAATGCAG...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCCTGCATTGTCTTCACTaGCAAAATCATCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFLHCLH*QNHPGR
Trigger: CCTACCTGGATGATTTTGCCAGTGAAGACAATGCAG...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAGGAAACCAAAGATTaGTCCTATAATTGCAACCGT +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTQETKD*SYNCNR
Trigger: ACGGTTGCAATTATAGGACCAATCTTTGGTTTCCTG...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp AATATAGAAAGCTGCATTGTCTTCACTGGCAAAATCATCCAGGTAGGCAATGCCTGTCAACATATAGTTTaGCACATAATGAGCCTAACA +
Preference number: 4 (lower is better)
Translates to: NIESCIVFTGKIIQVGNACQHIV*HIMSLT
Trigger: TGTTAGGCTCATTATGTGCCAAACTATATGTTGACA...GGCATTGCCTACCTGGATGATTTTGCCAGTGAAGACAATGCAGCTTTCTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCCCACTGGGGATCTTTTaGGGTAATGGTTATGTGATC +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFPLGIF*GNGYVI
Trigger: GATCACATAACCATTACCCCAAAAGATCCCCAGTGG...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCCTGCTCAATGTACTTTaGTTTGTACGTCACCATGCC +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFLLNVL*FVRHHA
Trigger: GGCATGGTGACGTACAAACCAAAGTACATTGAGCAG...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCTGCTCAATGTACTTTaGTTTGTACGTCACCATGCC +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSLLNVL*FVRHHA
Trigger: GGCATGGTGACGTACAAACCAAAGTACATTGAGCAG...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCATTTTCACCGCACATaGGTTCCCATTTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSHFHRT*VPILSL
Trigger: CAGAGACAAAATGGGAACCCATGTGCGGTGAAAATG...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCCATTTTCACCGCACATaGGTTCCCATTTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFHFHRT*VPILSL
Trigger: CAGAGACAAAATGGGAACCCATGTGCGGTGAAAATG...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCAAAAGACTTAAGCTGTaGCTTAATGCACCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTKRLKL*LNAPQK
Trigger: CTTCTGAGGTGCATTAAGCCACAGCTTAAGTCTTTT...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCAACTCCAAAATACACTaGAGCTGGGATTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYINSKIH*SWDSCK
Trigger: CTTGCAGGAATCCCAGCTCCAGTGTATTTTGGAGTT...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTAACTCCAAAATACACTaGAGCTGGGATTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSNSKIH*SWDSCK
Trigger: CTTGCAGGAATCCCAGCTCCAGTGTATTTTGGAGTT...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCTTTATGGGAGAGAGTaGATAAAAGAAAAGACCACT +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTLYGRE*IKEKTT
Trigger: AGTGGTCTTTTCTTTTATTCACTCTCTCCCATAAAG...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266509.7
CDS-3UTR TCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCATTTGTACTGCTCCATaGAGAACTGAGGCATTGCAA +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFICTAP*RTEALQ
Trigger: TTGCAATGCCTCAGTTCTTCATGGAGCAGTACAAAT...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCACTGAAACTGGTAATTaGCTGCTTGACTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFTETGN*LLDSRR
Trigger: TCTCCTAGAGTCAAGCAGTCAATTACCAGTTTCAGT...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCTCCCCATTTGAGGCATaGAGTATCAATCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYISPFEA*SINQNS
Trigger: GGAGTTTTGATTGATACTTCATGCCTCAAATGGGGA...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCCCCATTTGAGGCATaGAGTATCAATCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFSPFEA*SINQNS
Trigger: GGAGTTTTGATTGATACTTCATGCCTCAAATGGGGA...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCATTTCTTTGCAATTTaGTGCAAGTTTAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTHFFAI*CKFKAT
Trigger: TGTGGCCTTAAACTTGCAGCAAATTGCAAAGAAATG...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266509.7
CDS-3UTR GCA 90 bp GATTTCTCAGAGGAAGAATTAGAATCCTCTCTACTTTGGGATCTTGGTAAACTCCATTTCTTTGCAATTTaGTGCAAGTTTAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: DFSEEELESSLLWDLGKLHFFAI*CKFKAT
Trigger: TGTGGCCTTAAACTTGCAGCAAATTGCAAAGAAATG...GAGTTTACCAAGATCCCAAAGTAGAGAGGATTCTAATTCTTCCTCTGAGAAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR GCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCTTCAGATAGCCTTCTaGCAATGCTTTGGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSLQIAF*QCFGKV
Trigger: TACTTTGCCAAAGCATTGGCAGAAGGCTATCTGAAG...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545604.5
CDS-3UTR GCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGACTGTCCATACTGCTaGTCAATGTACTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSDCPYC*SMYFGL
Trigger: CAAACCAAAGTACATTGAGCAGCAGTATGGACAGTC...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCGATGACTGTCCATACTaGTGCTCAATGTACTTTGGT +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYIDDCPY*CSMYFG
Trigger: ACCAAAGTACATTGAGCAGCAGTATGGACAGTCATC...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGATGACTGTCCATACTaGTGCTCAATGTACTTTGGT +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSDDCPY*CSMYFG
Trigger: ACCAAAGTACATTGAGCAGCAGTATGGACAGTCATC...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCGATGACTGTCCATACTaGTGCTCAATGTACTTTGGT +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFDDCPY*CSMYFG
Trigger: ACCAAAGTACATTGAGCAGCAGTATGGACAGTCATC...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCTTGTCTCTGAACATTTaGATCTTGAGTTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTLSLNI*ILSCNL
Trigger: CAGATTGCAACTCAAGATGCAAATGTTCAGAGACAA...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGCTGTAGCAATGAGATaGGGGAATGCTTTTGATTTG +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSAVAMR*GNAFDL
Trigger: CAAATCAAAAGCATTCCCGCATCTCATTGCTACAGC...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CCA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTGAATCCTCTCTACTTTaGGATCTTGGTAAACTCTTT +
Preference number: 4 (lower is better)
Translates to: AMGENTIGVILEGTQGMSESSLL*DLGKLF
Trigger: AAAGAGTTTACCAAGATCCCAAAGTAGAGAGGATTC...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCGAATCCTCTCTACTTTaGGATCTTGGTAAACTCTTT +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTESSLL*DLGKLF
Trigger: AAAGAGTTTACCAAGATCCCAAAGTAGAGAGGATTC...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCAAAATACACTGGAGCTaGGATTCCTGCAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFKIHWS*DSCKNS
Trigger: AGAGTTCTTGCAGGAATCCCAGCTCCAGTGTATTTT...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp AGGAAGTATACTGGGTTTCCAAAAAGATTCTTCAGTGATGGAAGAAAATCTCTTCTGCAAGAAGACTTATaGTTCCTGCTATTAGATAGC +
Preference number: 4 (lower is better)
Translates to: RKYTGFPKRFFSDGRKSLLQEDL*FLLLDS
Trigger: GCTATCTAATAGCAGGAATCATAAGTCTTCTTGCAG...AAGAGATTTTCTTCCATCACTGAAGAATCTTTTTGGAAACCCAGTATACTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR TCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCCTGCAAGAAGACTTATaGTTCCTGCTATTAGATAGC +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFLQEDL*FLLLDS
Trigger: GCTATCTAATAGCAGGAATCATAAGTCTTCTTGCAG...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCAAGCTGATACATATGTaGTTCCATTTTCACCGCACA +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFKLIHM*FHFHRT
Trigger: TGTGCGGTGAAAATGGAATCACATATGTATCAGCTT...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCACCAGCAAGACAAGCTaGTACATATGTGATTCCATT +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYITSKTS*YICDSI
Trigger: AATGGAATCACATATGTATCAGCTTGTCTTGCTGGT...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR TCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCACCAGCAAGACAAGCTaGTACATATGTGATTCCATT +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFTSKTS*YICDSI
Trigger: AATGGAATCACATATGTATCAGCTTGTCTTGCTGGT...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCTATAGGAGTAATACTTaGAGGAACCCAAGGTATGAG +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYIYRSNT*RNPRYE
Trigger: CTCATACCTTGGGTTCCTTCAAGTATTACTCCTATA...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCTTCTTTGCAATTTGCTaGAAGTTTAAGGCCACACGT +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYIFFAIC*KFKATR
Trigger: ACGTGTGGCCTTAAACTTGCAGCAAATTGCAAAGAA...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266509.7
CDS-3UTR GCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCCATGATTACACACCCTaGTCCAATTATTTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYIHDYTP*SNYFWP
Trigger: AGGCCAAAAATAATTGGAGCAGGGTGTGTAATCATG...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCATGATTACACACCCTaGTCCAATTATTTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSHDYTP*SNYFWP
Trigger: AGGCCAAAAATAATTGGAGCAGGGTGTGTAATCATG...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTTCCTCTCCATGTTCTaGTCCATCCTAAGATCATTA +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFFLSMF*SILRSL
Trigger: TAATGATCTTAGGATGGAGCAGAACATGGAGAGGAA...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545102.1
CDS-3UTR CCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCCTTGACTCTGATCTaGAGGAAGAGATCAAAGATA +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFSLTLI*RKRSKI
Trigger: TATCTTTGATCTCTTCCTCCAGATCAGAGTCAAGGA...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539415.5
ENST00000545604.5
CDS-3UTR CCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCCAGGAAACCAAAGATTaGTCCTATAATTGCAACCGT +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFQETKD*SYNCNR
Trigger: ACGGTTGCAATTATAGGACCAATCTTTGGTTTCCTG...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCAGGAAACCAAAGATTaGTCCTATAATTGCAACCGT +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSQETKD*SYNCNR
Trigger: ACGGTTGCAATTATAGGACCAATCTTTGGTTTCCTG...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CCA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCTGTCAACATATAGTTTaGCACATAATGAGCCTAACA +
Preference number: 4 (lower is better)
Translates to: QMKTAMGENTIGVILEGTCQHIV*HIMSLT
Trigger: TGTTAGGCTCATTATGTGCCAAACTATATGTTGACA...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTAAAAGACTTAAGCTGTaGCTTAATGCACCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSKRLKL*LNAPQK
Trigger: CTTCTGAGGTGCATTAAGCCACAGCTTAAGTCTTTT...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR TCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCAGCAGTGAAATGACATaGAAACTTGTTAGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFSSEMT*KLVSVS
Trigger: ACTGACACTAACAAGTTTTCATGTCATTTCACTGCT...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCATAGCCTTCTGCCAATaGTTTGGCAAAGTAAACAAA +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYIIAFCQ*FGKVNK
Trigger: TTTGTTTACTTTGCCAAAGCATTGGCAGAAGGCTAT...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266509.7
CDS-3UTR GCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCATAGCCTTCTGCCAATaGTTTGGCAAAGTAAACAAA +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFIAFCQ*FGKVNK
Trigger: TTTGTTTACTTTGCCAAAGCATTGGCAGAAGGCTAT...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545604.5
CDS-3UTR GCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCTTGTCTCTGAACATTTaGATCTTGAGTTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYILSLNI*ILSCNL
Trigger: CAGATTGCAACTCAAGATGCAAATGTTCAGAGACAA...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTTGTCTCTGAACATTTaGATCTTGAGTTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFLSLNI*ILSCNL
Trigger: CAGATTGCAACTCAAGATGCAAATGTTCAGAGACAA...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCATATGTATCCAGGTATaGCACCTAGGGATAAAGTAT +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYIICIQV*HLGIKY
Trigger: ATACTTTATCCCTAGGTGGCATACCTGGATACATAT...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR GCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCATATGTATCCAGGTATaGCACCTAGGGATAAAGTAT +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFICIQV*HLGIKY
Trigger: ATACTTTATCCCTAGGTGGCATACCTGGATACATAT...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR GCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTATATGTATCCAGGTATaGCACCTAGGGATAAAGTAT +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSICIQV*HLGIKY
Trigger: ATACTTTATCCCTAGGTGGCATACCTGGATACATAT...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CCA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCGAATCCTCTCTACTTTaGGATCTTGGTAAACTCTTT +
Preference number: 4 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFESSLL*DLGKLF
Trigger: AAAGAGTTTACCAAGATCCCAAAGTAGAGAGGATTC...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CCA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCTGTCAACATATAGTTTaGCACATAATGAGCCTAACA +
Preference number: 4 (lower is better)
Translates to: PCVTIETIVLLGVQLIYICQHIV*HIMSLT
Trigger: TGTTAGGCTCATTATGTGCCAAACTATATGTTGACA...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTTGTCAACATATAGTTTaGCACATAATGAGCCTAACA +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSCQHIV*HIMSLT
Trigger: TGTTAGGCTCATTATGTGCCAAACTATATGTTGACA...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CCA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGGAATGCTTTTGATTTaGTACCTGAAGACATTTGAA +
Preference number: 4 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSGMLLI*YLKTFE
Trigger: TTCAAATGTCTTCAGGTACCAAATCAAAAGCATTCC...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS GCA 90 bp GAGGGAAGGAAGCTCAATGACATGAACGGAAAGATCCTTGGGGCCTaGAGGCTCTCTCTCTTCATTTGCAACTGGAGGAAGAGATCAAAG +
Preference number: 5 (lower is better)
Translates to: EGRKLNDMNGKILGA*RLSLFICNWRKRSK
Trigger: CTTTGATCTCTTCCTCCAGTTGCAAATGAAGAGAGAGAGCCTGCAGGCCCCAAGGATCTTTCCGTTCATGTCATTGAGCTTCCTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534996.5
CDS-3UTR CAA 90 bp AATATAGAAAGCTGCATTGTCTTCACTGGCAAAATCATCCAGGTAGGCAATGCCGCAGTCAGCAGAGAATaGGCCACGCTGGCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: NIESCIVFTGKIIQVGNAAVSRE*ATLARP
Trigger: TGGCCTTGCCAGCGTGGCCAATTCTCTGCTGACTGC...GGCATTGCCTACCTGGATGATTTTGCCAGTGAAGACAATGCAGCTTTCTATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CAA 90 bp CTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCACCCTGGTAATTGACTGCTaGACTCTAGGAGACACGGAG +
Preference number: 5 (lower is better)
Translates to: LEDDCPYCCSMYFGLYVTLVIDC*TLGDTE
Trigger: CTCCGTGTCTCCTAGAGTCAAGCAGTCAATTACCAG...GGTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CAA 90 bp GCCCTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCGCTGCTCAATGTACTTaGGTTTGTACGTCACCATGC +
Preference number: 5 (lower is better)
Translates to: ALEDDCPYCCSMYFGLYVAAQCT*VCTSPC
Trigger: GCATGGTGACGTACAAACCAAAGTACATTGAGCAGC...GACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CAA 90 bp CTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCACCACTCCTGTTGGAGGTTaGACAACCAGCAAGACAAGC +
Preference number: 5 (lower is better)
Translates to: LEDDCPYCCSMYFGLYVTTPVGG*TTSKTS
Trigger: GCTTGTCTTGCTGGTTGTCAAACCTCCAACAGGAGT...GGTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS GCA 90 bp GATTCCCTGGAGGAAGAGATCAAAGATAGCCAGTTCCTTTCAATGTaGTCAGCAAGAGGATGGACCACACACCACAGACTGAAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: DSLEEEIKDSQFLSM*SARGWTTHHRLKEE
Trigger: TTCCTCTTTCAGTCTGTGGTGTGTGGTCCATCCTCTTGCTGAGCACATTGAAAGGAACTGGCTATCTTTGATCTCTTCCTCCAGGGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545102.1
CDS-3UTR CAA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCGCAGTCAGCAGAGAATaGGCCACGCTGGCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: QMKTAMGENTIGVILEGTAVSRE*ATLARP
Trigger: TGGCCTTGCCAGCGTGGCCAATTCTCTGCTGACTGC...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266509.7
CDS GCA 90 bp TCTGATCTGGAGGAAGAGATCAAAGATAGCCAGTTCCTTTCAATGTaGTCAGCAAGAGGATGGACCACACACCACAGACTGAAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: SDLEEEIKDSQFLSM*SARGWTTHHRLKEE
Trigger: TTCCTCTTTCAGTCTGTGGTGTGTGGTCCATCCTCTTGCTGAGCACATTGAAAGGAACTGGCTATCTTTGATCTCTTCCTCCAGATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266509.7
CDS-3UTR CAA 90 bp GCCCTGGAGGATGACTGTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCACATGGGTTCCCATTTaGTCTCTGAACATTTGCATC +
Preference number: 5 (lower is better)
Translates to: ALEDDCPYCCSMYFGLYVTWVPI*SLNICI
Trigger: GATGCAAATGTTCAGAGACAAAATGGGAACCCATGT...GACGTACAAACCAAAGTACATTGAGCAGCAGTATGGACAGTCATCCTCCAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CAA 90 bp GTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCACCATGCCGAACAGAGGATGCGGGAATGCTTTaGATTTGGTACCTGAAGACA +
Preference number: 5 (lower is better)
Translates to: VHTAAQCTLVCTSPCRTEDAGML*IWYLKT
Trigger: TGTCTTCAGGTACCAAATCAAAAGCATTCCCGCATC...CTCTGTTCGGCATGGTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CAA 90 bp GTCCATACTGCTGCTCAATGTACTTTGGTTTGTACGTCACCATGCCGAACAGAGTTAGTGTCAGTGGCATaGTGTAAATCTGGGATGCTG +
Preference number: 5 (lower is better)
Translates to: VHTAAQCTLVCTSPCRTELVSVA*CKSGML
Trigger: CAGCATCCCAGATTTACACAATGCCACTGACACTAA...CTCTGTTCGGCATGGTGACGTACAAACCAAAGTACATTGAGCAGCAGTATGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS GCA 90 bp AGGCATTGCAATGAGCAGTGTTCCAACTCCCATGATTACACACCCTaGTCCAATTATTTTTGGCCTGTGAAGTTTGGCTCCAAAGTAGCT +
Preference number: 5 (lower is better)
Translates to: RHCNEQCSNSHDYTP*SNYFWPVKFGSKVA
Trigger: AGCTACTTTGGAGCCAAACTTCACAGGCCAAAAATAATTGGAGCAGGGTGTGTAATCATGGGAGTTGGAACACTGCTCATTGCAATGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266509.7
ENST00000540354.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGCAGTCAGCAGAGAATaGGCCACGCTGGCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSAVSRE*ATLARP
Trigger: TGGCCTTGCCAGCGTGGCCAATTCTCTGCTGACTGC...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539415.5
ENST00000545604.5
CDS-3UTR CAA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTAGCCCGATCACAAAGTaGGCCCTGGAGGATGACTGT +
Preference number: 5 (lower is better)
Translates to: AMGENTIGVILEGTQGMSSPITK*ALEDDC
Trigger: ACAGTCATCCTCCAGGGCCAACTTTGTGATCGGGCT...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS GCA 90 bp AGAATATCTCTCATATTTGTACTGCTCCATGAAGAACTGAGGCATTaGAATGAGCAGTGTTCCAACTCCCATGATTACACACCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RISLIFVLLHEELRH*NEQCSNSHDYTPCS
Trigger: GGAGCAGGGTGTGTAATCATGGGAGTTGGAACACTGCTCATTGCAATGCCTCAGTTCTTCATGGAGCAGTACAAATATGAGAGATATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266509.7
ENST00000540354.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCGCCACTGCTGGAATGTaGATGAGCCCGATCACAAAG +
Preference number: 5 (lower is better)
Translates to: QMKTAMGENTIGVILEGTATAGM*MSPITK
Trigger: CTTTGTGATCGGGCTCATCAACATTCCAGCAGTGGC...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp AGTTTGGCACATAATGAGCCTAACAGGAAACCAAAGATTGGTCCTATAATTGCAGCCACTGCTGGAATGTaGATGAGCCCGATCACAAAG +
Preference number: 5 (lower is better)
Translates to: SLAHNEPNRKPKIGPIIAATAGM*MSPITK
Trigger: CTTTGTGATCGGGCTCATCAACATTCCAGCAGTGGC...TGCAATTATAGGACCAATCTTTGGTTTCCTGTTAGGCTCATTATGTGCCAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS TCA 90 bp AAACTGGTAATTGACTGCTTGACTCTAGGAGACACGGAGAGATGCTaGGAGTGGAATTGGAGGAAGGAGAATATCTCTCATATTTGTACC +
Preference number: 5 (lower is better)
Translates to: KLVIDCLTLGDTERC*EWNWRKENISHICT
Trigger: GGTACAAATATGAGAGATATTCTCCTTCCTCCAATTCCACTCTCAGCATCTCTCCGTGTCTCCTAGAGTCAAGCAGTCAATTACCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS GCA 90 bp TCTCTCTATCTGAGTGATGGTGCTCTTCAGATAGCCTTCTGCCAATaGTTTGGCAAAGTAAACAAAAGACAAGGCACACAAGAACACCTT +
Preference number: 5 (lower is better)
Translates to: SLYLSDGALQIAFCQ*FGKVNKRQGTQEHL
Trigger: AAGGTGTTCTTGTGTGCCTTGTCTTTTGTTTACTTTGCCAAAGCATTGGCAGAAGGCTATCTGAAGAGCACCATCACTCAGATAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266509.7
ENST00000540354.5
ENST00000545604.5
CDS-3UTR CAA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCTGGTAATTGACTGCTaGACTCTAGGAGACACGGAG +
Preference number: 5 (lower is better)
Translates to: QMKTAMGENTIGVILEGTLVIDC*TLGDTE
Trigger: CTCCGTGTCTCCTAGAGTCAAGCAGTCAATTACCAG...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTTTCTCCCTGGGGTGTTaGGTAGTCTGTGTGATCATC +
Preference number: 5 (lower is better)
Translates to: AMGENTIGVILEGTQGMSFSLGC*VVCVII
Trigger: GATGATCACACAGACTACCAAACACCCCAGGGAGAA...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCTTCTCCCTGGGGTGTTaGGTAGTCTGTGTGATCATC +
Preference number: 5 (lower is better)
Translates to: QMKTAMGENTIGVILEGTFSLGC*VVCVII
Trigger: GATGATCACACAGACTACCAAACACCCCAGGGAGAA...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp TCCGGATTTAGAAGCTGCAATTCCCACACAAGTGCAGTTGTAAAATATAATATTAGCCCGATCACAAAGTaGGCCCTGGAGGATGACTGT +
Preference number: 5 (lower is better)
Translates to: SGFRSCNSHTSAVVKYNISPITK*ALEDDC
Trigger: ACAGTCATCCTCCAGGGCCAACTTTGTGATCGGGCT...AATATTATATTTTACAACTGCACTTGTGTGGGAATTGCAGCTTCTAAATCCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CAA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCAGCCCGATCACAAAGTaGGCCCTGGAGGATGACTGT +
Preference number: 5 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFSPITK*ALEDDC
Trigger: ACAGTCATCCTCCAGGGCCAACTTTGTGATCGGGCT...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS TCA 90 bp AAACTGGTAATTGACTGCTTGACTCTAGGAGACACGGAGAGATGCTaGGAGTGGAATTGGAGGAAGGAGAATATCTCTCATATTTGTACT +
Preference number: 5 (lower is better)
Translates to: KLVIDCLTLGDTERC*EWNWRKENISHICT
Trigger: AGTACAAATATGAGAGATATTCTCCTTCCTCCAATTCCACTCTCAGCATCTCTCCGTGTCTCCTAGAGTCAAGCAGTCAATTACCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266509.7
ENST00000540354.5
ENST00000545102.1
ENST00000545604.5
CDS GCA 90 bp AGGGCACAGAAAGAGCTGAAGCTTTTGAGCCATTTCTTTGCAATTTaGTGCAAGTTTAAGGCCACACGTGATAAAGCTTTCTTTATGGGA +
Preference number: 5 (lower is better)
Translates to: RAQKELKLLSHFFAI*CKFKATRDKAFFMG
Trigger: TCCCATAAAGAAAGCTTTATCACGTGTGGCCTTAAACTTGCAGCAAATTGCAAAGAAATGGCTCAAAAGCTTCAGCTCTTTCTGTGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000534996.5
CDS GCA 90 bp AAACCTTCTCTCTATCTGAGTGATGGTGCTCTTCAGATAGCCTTCTaGCAATGCTTTGGCAAAGTAAACAAAAGACAAGGCACACAAGAA +
Preference number: 5 (lower is better)
Translates to: KPSLYLSDGALQIAF*QCFGKVNKRQGTQE
Trigger: TTCTTGTGTGCCTTGTCTTTTGTTTACTTTGCCAAAGCATTGGCAGAAGGCTATCTGAAGAGCACCATCACTCAGATAGAGAGAAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266509.7
ENST00000540354.5
ENST00000545604.5
CDS-3UTR CAA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCGCTGCTCAATGTACTTaGGTTTGTACGTCACCATGC +
Preference number: 5 (lower is better)
Translates to: QMKTAMGENTIGVILEGTAAQCT*VCTSPC
Trigger: GCATGGTGACGTACAAACCAAAGTACATTGAGCAGC...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCGCCACTGCTGGAATGTaGATGAGCCCGATCACAAAG +
Preference number: 5 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFATAGM*MSPITK
Trigger: CTTTGTGATCGGGCTCATCAACATTCCAGCAGTGGC...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS CCA 90 bp CAGTGTTCCAACTCCCATGATTACACACCCTGCTCCAATTATTTTTaGCCTGTGAAGTTTGGCTCCAAAGTAGCTAACAAATGTTATAAC +
Preference number: 5 (lower is better)
Translates to: QCSNSHDYTPCSNYF*PVKFGSKVANKCYN
Trigger: GTTATAACATTTGTTAGCTACTTTGGAGCCAAACTTCACAGGCCAAAAATAATTGGAGCAGGGTGTGTAATCATGGGAGTTGGAACACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266509.7
ENST00000540354.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCCTGGTAATTGACTGCTaGACTCTAGGAGACACGGAG +
Preference number: 5 (lower is better)
Translates to: PCVTIETIVLLGVQLIYILVIDC*TLGDTE
Trigger: CTCCGTGTCTCCTAGAGTCAAGCAGTCAATTACCAG...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCCTGGTAATTGACTGCTaGACTCTAGGAGACACGGAG +
Preference number: 5 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFLVIDC*TLGDTE
Trigger: CTCCGTGTCTCCTAGAGTCAAGCAGTCAATTACCAG...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTTTCTCCCTGGGGTGTTaGGTAGTCTGTGTGATCATC +
Preference number: 5 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSFSLGC*VVCVII
Trigger: GATGATCACACAGACTACCAAACACCCCAGGGAGAA...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCTCAATGTACTTTGGTTaGTACGTCACCATGCCGAAC +
Preference number: 5 (lower is better)
Translates to: QMKTAMGENTIGVILEGTSMYFG*YVTMPN
Trigger: GTTCGGCATGGTGACGTACAAACCAAAGTACATTGA...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCACTCCTGTTGGAGGTTaGACAACCAGCAAGACAAGC +
Preference number: 5 (lower is better)
Translates to: PCVTIETIVLLGVQLIYITPVGG*TTSKTS
Trigger: GCTTGTCTTGCTGGTTGTCAAACCTCCAACAGGAGT...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCACTCCTGTTGGAGGTTaGACAACCAGCAAGACAAGC +
Preference number: 5 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFTPVGG*TTSKTS
Trigger: GCTTGTCTTGCTGGTTGTCAAACCTCCAACAGGAGT...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp GGATTCCTGCAAGAACTCTTATTGCTAATGTGTAGATACCCAAGGCAAAAGACTGGTTGCACTGAAGTTTaGCAGAACAACTGGATATTT +
Preference number: 5 (lower is better)
Translates to: GFLQELLLLMCRYPRQKTGCTEV*QNNWIF
Trigger: AAATATCCAGTTGTTCTGCAAAACTTCAGTGCAACC...AGTCTTTTGCCTTGGGTATCTACACATTAGCAATAAGAGTTCTTGCAGGAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CAA 90 bp GATTGGTCCTATAATTGCAACCGTCTGCACACACCCAATATAGAAAGCTGCATTCTCTACTTTGGGATCTaGGTAAACTCTTTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: DWSYNCNRLHTPNIESCILYFGI*VNSLVN
Trigger: ATTTACCAAAGAGTTTACCAAGATCCCAAAGTAGAG...AATGCAGCTTTCTATATTGGGTGTGTGCAGACGGTTGCAATTATAGGACCAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CAA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGCTGCTCAATGTACTTaGGTTTGTACGTCACCATGC +
Preference number: 5 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSAAQCT*VCTSPC
Trigger: GCATGGTGACGTACAAACCAAAGTACATTGAGCAGC...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTACATGGGTTCCCATTTaGTCTCTGAACATTTGCATC +
Preference number: 5 (lower is better)
Translates to: AMGENTIGVILEGTQGMSTWVPI*SLNICI
Trigger: GATGCAAATGTTCAGAGACAAAATGGGAACCCATGT...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCACATGGGTTCCCATTTaGTCTCTGAACATTTGCATC +
Preference number: 5 (lower is better)
Translates to: QMKTAMGENTIGVILEGTTWVPI*SLNICI
Trigger: GATGCAAATGTTCAGAGACAAAATGGGAACCCATGT...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCATCATGTTTCTAAAGTaGAGTTTCCTTGCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: QMKTAMGENTIGVILEGTIMFLK*SFLAWP
Trigger: TGGCCAGGCAAGGAAACTCAACTTTAGAAACATGAT...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCGGTTGCACTGAAGTTTaGCAGAACAACTGGATATTT +
Preference number: 5 (lower is better)
Translates to: QMKTAMGENTIGVILEGTGCTEV*QNNWIF
Trigger: AAATATCCAGTTGTTCTGCAAAACTTCAGTGCAACC...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266509.7
CDS-3UTR CAA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCCTGCTCCAATTATTTTaGGCCTGTGAAGTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: PCVTIETIVLLGVQLIYILLQLF*ACEVWL
Trigger: GAGCCAAACTTCACAGGCCAAAAATAATTGGAGCAG...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCCTGCTCCAATTATTTTaGGCCTGTGAAGTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFLLQLF*ACEVWL
Trigger: GAGCCAAACTTCACAGGCCAAAAATAATTGGAGCAG...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCTGCTCCAATTATTTTaGGCCTGTGAAGTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSLLQLF*ACEVWL
Trigger: GAGCCAAACTTCACAGGCCAAAAATAATTGGAGCAG...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTTCAATGTACTTTGGTTaGTACGTCACCATGCCGAAC +
Preference number: 5 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSSMYFG*YVTMPN
Trigger: GTTCGGCATGGTGACGTACAAACCAAAGTACATTGA...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCTCAATGTACTTTGGTTaGTACGTCACCATGCCGAAC +
Preference number: 5 (lower is better)
Translates to: PCVTIETIVLLGVQLIYISMYFG*YVTMPN
Trigger: GTTCGGCATGGTGACGTACAAACCAAAGTACATTGA...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCATTTGCATCTTGAGTaGCAATCTGAAAAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: QMKTAMGENTIGVILEGTHLHLE*QSEKRA
Trigger: AGCTCTCTTTTCAGATTGCAACTCAAGATGCAAATG...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp AGTTTGGCACATAATGAGCCTAACAGGAAACCAAAGATTGGTCCTATAATTGCACATTTGCATCTTGAGTaGCAATCTGAAAAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: SLAHNEPNRKPKIGPIIAHLHLE*QSEKRA
Trigger: AGCTCTCTTTTCAGATTGCAACTCAAGATGCAAATG...TGCAATTATAGGACCAATCTTTGGTTTCCTGTTAGGCTCATTATGTGCCAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CAA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTCATTTGCATCTTGAGTaGCAATCTGAAAAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: AMGENTIGVILEGTQGMSHLHLE*QSEKRA
Trigger: AGCTCTCTTTTCAGATTGCAACTCAAGATGCAAATG...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTCTGCAAGAACTCTTATaGCTAATGTGTAGATACCCA +
Preference number: 5 (lower is better)
Translates to: AMGENTIGVILEGTQGMSLQELL*LMCRYP
Trigger: TGGGTATCTACACATTAGCAATAAGAGTTCTTGCAG...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp GATTTCTCAGAGGAAGAATTAGAATCCTCTCTACTTTGGGATCTTGGTAAACTCCTGCAAGAACTCTTATaGCTAATGTGTAGATACCCA +
Preference number: 5 (lower is better)
Translates to: DFSEEELESSLLWDLGKLLQELL*LMCRYP
Trigger: TGGGTATCTACACATTAGCAATAAGAGTTCTTGCAG...GAGTTTACCAAGATCCCAAAGTAGAGAGGATTCTAATTCTTCCTCTGAGAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539415.5
CDS-3UTR CAA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCGATGCGGGAATGCTTTaGATTTGGTACCTGAAGACA +
Preference number: 5 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFDAGML*IWYLKT
Trigger: TGTCTTCAGGTACCAAATCAAAAGCATTCCCGCATC...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTGATGCGGGAATGCTTTaGATTTGGTACCTGAAGACA +
Preference number: 5 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSDAGML*IWYLKT
Trigger: TGTCTTCAGGTACCAAATCAAAAGCATTCCCGCATC...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCTTAGTGTCAGTGGCATaGTGTAAATCTGGGATGCTG +
Preference number: 5 (lower is better)
Translates to: PCVTIETIVLLGVQLIYILVSVA*CKSGML
Trigger: CAGCATCCCAGATTTACACAATGCCACTGACACTAA...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545102.1
CDS-3UTR CAA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTTTAGTGTCAGTGGCATaGTGTAAATCTGGGATGCTG +
Preference number: 5 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSLVSVA*CKSGML
Trigger: CAGCATCCCAGATTTACACAATGCCACTGACACTAA...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCAACTCCACAGCAATTTaGAACAATTTTGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: PCVTIETIVLLGVQLIYINSTAI*NNFARW
Trigger: CCACCTGGCAAAATTGTTCAAAATTGCTGTGGAGTT...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTAACTCCACAGCAATTTaGAACAATTTTGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSNSTAI*NNFARW
Trigger: CCACCTGGCAAAATTGTTCAAAATTGCTGTGGAGTT...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545102.1
CDS-3UTR CAA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCATGTCAACATATAGTTaGGCACATAATGAGCCTAAC +
Preference number: 5 (lower is better)
Translates to: QMKTAMGENTIGVILEGTMSTYS*AHNEPN
Trigger: GTTAGGCTCATTATGTGCCAAACTATATGTTGACAT...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp GCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCAAGGTATGAGTCTCTACTTTGGGATCTaGGTAAACTCTTTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: AMGENTIGVILEGTQGMSLYFGI*VNSLVN
Trigger: ATTTACCAAAGAGTTTACCAAGATCCCAAAGTAGAG...ACTCATACCTTGGGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp CAGATGAAGACAGCTATGGGAGAAAATACTATAGGAGTAATACTTGAAGGAACCCTCTACTTTGGGATCTaGGTAAACTCTTTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: QMKTAMGENTIGVILEGTLYFGI*VNSLVN
Trigger: ATTTACCAAAGAGTTTACCAAGATCCCAAAGTAGAG...GGTTCCTTCAAGTATTACTCCTATAGTATTTTCTCCCATAGCTGTCTTCATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCACATGGGTTCCCATTTaGTCTCTGAACATTTGCATC +
Preference number: 5 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFTWVPI*SLNICI
Trigger: GATGCAAATGTTCAGAGACAAAATGGGAACCCATGT...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCATCATGTTTCTAAAGTaGAGTTTCCTTGCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFIMFLK*SFLAWP
Trigger: TGGCCAGGCAAGGAAACTCAACTTTAGAAACATGAT...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp CCATGTGTGACAATAGAGACAATTGTTCTTCTAGGAGTACAGCTAATATATATCATCATGTTTCTAAAGTaGAGTTTCCTTGCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: PCVTIETIVLLGVQLIYIIMFLK*SFLAWP
Trigger: TGGCCAGGCAAGGAAACTCAACTTTAGAAACATGAT...GATATATATTAGCTGTACTCCTAGAAGAACAATTGTCTCTATTGTCACACATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS-3UTR CAA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCGGTTGCACTGAAGTTTaGCAGAACAACTGGATATTT +
Preference number: 5 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFGCTEV*QNNWIF
Trigger: AAATATCCAGTTGTTCTGCAAAACTTCAGTGCAACC...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539415.5
ENST00000545604.5
CDS-3UTR CAA 90 bp TTGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCCATTTGCATCTTGAGTaGCAATCTGAAAAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: LFAKCQPIRRHDFQSSCFHLHLE*QSEKRA
Trigger: AGCTCTCTTTTCAGATTGCAACTCAAGATGCAAATG...GAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCTGCAAGAACTCTTATaGCTAATGTGTAGATACCCA +
Preference number: 5 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSLQELL*LMCRYP
Trigger: TGGGTATCTACACATTAGCAATAAGAGTTCTTGCAG...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTATGTCAACATATAGTTaGGCACATAATGAGCCTAAC +
Preference number: 5 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSMSTYS*AHNEPN
Trigger: GTTAGGCTCATTATGTGCCAAACTATATGTTGACAT...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS-3UTR CAA 90 bp TGTTTGCAAAATGTCAACCAATTAGAAGACATGACTTCCAGTCATCATGTTTCTCTCTACTTTGGGATCTaGGTAAACTCTTTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: CLQNVNQLEDMTSSHHVSLYFGI*VNSLVN
Trigger: ATTTACCAAAGAGTTTACCAAGATCCCAAAGTAGAG...AGAAACATGATGACTGGAAGTCATGTCTTCTAATTGGTTGACATTTTGCAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539415.5
ENST00000545102.1
ENST00000545604.5
CDS GCA 72 bp GAGGAAGAGATCAAAGATAGCCAGTTCCTTTCAATGTaGTCAGCAAGAGGATGGACCACACACCACAGACCC +
Preference number: 6 (lower is better)
Translates to: EEEIKDSQFLSM*SARGWTTHHRP
Trigger: GGGTCTGTGGTGTGTGGTCCATCCTCTTGCTGAGCACATTGAAAGGAACTGGCTATCTTTGATCTCTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497911.6
ENST00000534996.5
ENST00000535609.1
ENST00000539415.5
ENST00000540354.5
ENST00000545604.5
CDS GCA 72 bp AAGCTCAATGACATGAACGGAAAGATCCTTGGGGCCTaGAGGCTCTCTCTCTTCATTTGCAACTGGAGGAAG +
Preference number: 6 (lower is better)
Translates to: KLNDMNGKILGA*RLSLFICNWRK
Trigger: CTTCCTCCAGTTGCAAATGAAGAGAGAGAGCCTGCAGGCCCCAAGGATCTTTCCGTTCATGTCATTGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534996.5
CDS GCA 72 bp GAGGAAGAGATCAAAGATAGCCAGTTCCTTTCAATGTaGTCAGCAAGAGGATGGACCACACACCACAGACTG +
Preference number: 6 (lower is better)
Translates to: EEEIKDSQFLSM*SARGWTTHHRL
Trigger: CAGTCTGTGGTGTGTGGTCCATCCTCTTGCTGAGCACATTGAAAGGAACTGGCTATCTTTGATCTCTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS CCA 72 bp GATAGCCAGTTCCTTTCAATGTGCTCAGCAAGAGGATaGACCACACACCACAGACTGAAAGAGGAAACTGAG +
Preference number: 6 (lower is better)
Translates to: DSQFLSMCSARG*TTHHRLKEETE
Trigger: CTCAGTTTCCTCTTTCAGTCTGTGGTGTGTGGTCCATCCTCTTGCTGAGCACATTGAAAGGAACTGGCTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266509.7
ENST00000545102.1
CDS TCA 72 bp GAATATCTCTCATATTTGTACTGCTCCATGAAGAACTaGGGCATTGCAATGAGCAGTGTTCCAACTCCCATG +
Preference number: 6 (lower is better)
Translates to: EYLSYLYCSMKN*GIAMSSVPTPM
Trigger: CATGGGAGTTGGAACACTGCTCATTGCAATGCCTCAGTTCTTCATGGAGCAGTACAAATATGAGAGATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266509.7
ENST00000540354.5
ENST00000545102.1
ENST00000545604.5
CDS GCA 72 bp CTCATATTTGTACTGCTCCATGAAGAACTGAGGCATTaGAATGAGCAGTGTTCCAACTCCCATGATTACACA +
Preference number: 6 (lower is better)
Translates to: LIFVLLHEELRH*NEQCSNSHDYT
Trigger: TGTGTAATCATGGGAGTTGGAACACTGCTCATTGCAATGCCTCAGTTCTTCATGGAGCAGTACAAATATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266509.7
ENST00000540354.5
ENST00000545102.1
ENST00000545604.5
CDS CAA 90 bp CCAACAGGTTGCACTGAAGTTTTGCAGAACAACTGGATATTTTCTTaGGATGAAGTGTCCATTATAAACACATTCCTTGACTCTGATCTG +
Preference number: 6 (lower is better)
Translates to: PTGCTEVLQNNWIFS*DEVSIINTFLDSDL
Trigger: CAGATCAGAGTCAAGGAATGTGTTTATAATGGACACTTCATCCAAAGAAAATATCCAGTTGTTCTGCAAAACTTCAGTGCAACCTGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266509.7
ENST00000497911.6
ENST00000539415.5
ENST00000540354.5
ENST00000545604.5
CDS CAA 72 bp TGCACTGAAGTTTTGCAGAACAACTGGATATTTTCTTaGGATGAAGTGTCCATTATAAACACATTCCTTGAC +
Preference number: 6 (lower is better)
Translates to: CTEVLQNNWIFS*DEVSIINTFLD
Trigger: GTCAAGGAATGTGTTTATAATGGACACTTCATCCAAAGAAAATATCCAGTTGTTCTGCAAAACTTCAGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266509.7
ENST00000497911.6
ENST00000539415.5
ENST00000540354.5
ENST00000545604.5