RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC6A20 (Homo sapiens)

Ensembl gene IDs: ENSG00000163817

Ensembl transcript IDs: ENST00000353278.8, ENST00000358525.9, ENST00000413781.1, ENST00000456124.6, ENST00000470226.1, ENST00000473146.5, ENST00000493980.1

Found 521 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCCAGGTGGCCCTGAGTTGTAAGACGGTGACTGTGAGTGGGGATTaGGAGGAGGGCCAGATCCTCCAGGATTCAGAGCAGACTCGGTGC +
Preference number: 1 (lower is better)
Translates to: SQVALSCKTVTVSGD*EEGQILQDSEQTRC
Trigger: GCACCGAGTCTGCTCTGAATCCTGGAGGATCTGGCCCTCCTCTCAATCCCCACTCACAGTCACCGTCTTACAACTCAGGGCCACCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR CCA 90 bp GGTCTTGCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTaGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCT +
Preference number: 1 (lower is better)
Translates to: GLASRRSDGWPQGVV*ASGVLNAPRWLECA
Trigger: AGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGCAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR TCA 90 bp CTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATGACTaGTCCCAGGTGGCCCTGAGTTGTAAGACGGTGACTGTGAGTGGG +
Preference number: 1 (lower is better)
Translates to: LRLPGIQGLRTLTDD*SQVALSCKTVTVSG
Trigger: CCCACTCACAGTCACCGTCTTACAACTCAGGGCCACCTGGGATCAGTCATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR CCA 90 bp AGCCACCGTGCCCAGCTGAGATCCACTTTCATTCTCACCTCACAGTaGCTCCTGACTCCTTTTCCAATGCACCAAGACACACACCACGGA +
Preference number: 1 (lower is better)
Translates to: SHRAQLRSTFILTSQ*LLTPFPMHQDTHHG
Trigger: TCCGTGGTGTGTGTCTTGGTGCATTGGAAAAGGAGTCAGGAGCCACTGTGAGGTGAGAATGAAAGTGGATCTCAGCTGGGCACGGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR CCA 90 bp GAGAAAAGAAATAAGACACAGAGACAAAGTATAGAGAAAGAACAGTaGGCCCAGGACCGGCGCTCAGCATGTGGAGGACCCGCACCGGCG +
Preference number: 1 (lower is better)
Translates to: EKRNKTQRQSIEKEQ*AQDRRSACGGPAPA
Trigger: CGCCGGTGCGGGTCCTCCACATGCTGAGCGCCGGTCCTGGGCCCACTGTTCTTTCTCTATACTTTGTCTCTGTGTCTTATTTCTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR CCA 90 bp CATGATCTGGCCATCGTGTCATGGCTACCACTAAGGGTACAGGGATaGAATGTCCCTTTGTCGCTCCAGCTTATTGGAGGGTGGGTGGAC +
Preference number: 1 (lower is better)
Translates to: HDLAIVSWLPLRVQG*NVPLSLQLIGGWVD
Trigger: GTCCACCCACCCTCCAATAAGCTGGAGCGACAAAGGGACATTCCATCCCTGTACCCTTAGTGGTAGCCATGACACGATGGCCAGATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR GCA 90 bp GGGGAAACCTTGGACAATACCCAGGCTTTCTTGGGCAGAGGTCCCTaGAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGG +
Preference number: 1 (lower is better)
Translates to: GETLDNTQAFLGRGP*SFLLCIVSLVNREW
Trigger: CCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGCAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCCAAGGTTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR GCA 90 bp TGGACAATACCCAGGCTTTCTTGGGCAGAGGTCCCTGCAGCTTTCTaGTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGA +
Preference number: 1 (lower is better)
Translates to: WTIPRLSWAEVPAAF*CALCPWLIENGEWR
Trigger: TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGCAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR GCA 90 bp AATACCCAGGCTTTCTTGGGCAGAGGTCCCTGCAGCTTTCTGCTGTaGATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGATGACT +
Preference number: 1 (lower is better)
Translates to: NTQAFLGRGPCSFLL*IVSLVNREWRMAMT
Trigger: AGTCATCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGCAGGGACCTCTGCCCAAGAAAGCCTGGGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR CCA 90 bp GTACAGGGATGGAATGTCCCTTTGTCGCTCCAGCTTATTGGAGGGTaGGTGGACAAATGTCGACATGGCCACTTTTGTGCAGTATCTAGG +
Preference number: 1 (lower is better)
Translates to: VQGWNVPLSLQLIGG*VDKCRHGHFCAVSR
Trigger: CCTAGATACTGCACAAAAGTGGCCATGTCGACATTTGTCCACCCACCCTCCAATAAGCTGGAGCGACAAAGGGACATTCCATCCCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR CCA 90 bp ACTAAGGGTACAGGGATGGAATGTCCCTTTGTCGCTCCAGCTTATTaGAGGGTGGGTGGACAAATGTCGACATGGCCACTTTTGTGCAGT +
Preference number: 1 (lower is better)
Translates to: TKGTGMECPFVAPAY*RVGGQMSTWPLLCS
Trigger: ACTGCACAAAAGTGGCCATGTCGACATTTGTCCACCCACCCTCCAATAAGCTGGAGCGACAAAGGGACATTCCATCCCTGTACCCTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR CCA 90 bp AAAAACAGAAAGCTTTCCGGAGTCCATGATCTGGCCATCGTGTCATaGCTACCACTAAGGGTACAGGGATGGAATGTCCCTTTGTCGCTC +
Preference number: 1 (lower is better)
Translates to: KNRKLSGVHDLAIVS*LPLRVQGWNVPLSL
Trigger: GAGCGACAAAGGGACATTCCATCCCTGTACCCTTAGTGGTAGCCATGACACGATGGCCAGATCATGGACTCCGGAAAGCTTTCTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR CCA 90 bp AGGGATGGAATGTCCCTTTGTCGCTCCAGCTTATTGGAGGGTGGGTaGACAAATGTCGACATGGCCACTTTTGTGCAGTATCTAGGAAAT +
Preference number: 1 (lower is better)
Translates to: RDGMSLCRSSLLEGG*TNVDMATFVQYLGN
Trigger: ATTTCCTAGATACTGCACAAAAGTGGCCATGTCGACATTTGTCCACCCACCCTCCAATAAGCTGGAGCGACAAAGGGACATTCCATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR TCA 90 bp TTCTTCCTGCACACCTTCCTCATCTTCTTTAGACACTCAGGAAGTTaGTGGGCTGAGCACTCCTGGCTTAAGCATTTGAAAAAGCAGCCG +
Preference number: 1 (lower is better)
Translates to: FFLHTFLIFFRHSGS*WAEHSWLKHLKKQP
Trigger: CGGCTGCTTTTTCAAATGCTTAAGCCAGGAGTGCTCAGCCCATCAACTTCCTGAGTGTCTAAAGAAGATGAGGAAGGTGTGCAGGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR TCA 90 bp TGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGATaGCTTCTACCAAGCATACAGCCTGCAAACATATTGTTAACAAGG +
Preference number: 1 (lower is better)
Translates to: CCALCPWLIENGEWR*LLPSIQPANILLTR
Trigger: CCTTGTTAACAATATGTTTGCAGGCTGTATGCTTGGTAGAAGTCATCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR TCA 90 bp TTGTTAACAAGGCACATCCTGCACAGCCCTAAATCCATTAAACTTTaGTTCATTACAGCGCATGTTTCTGTGAGCACAGAGTTGGGGCTA +
Preference number: 1 (lower is better)
Translates to: LLTRHILHSPKSIKL*FITAHVSVSTELGL
Trigger: TAGCCCCAACTCTGTGCTCACAGAAACATGCGCTGTAATGAATCAAAGTTTAATGGATTTAGGGCTGTGCAGGATGTGCCTTGTTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR TCA 90 bp GTTCATACATTTGAAAGTCAAATGTATGATAACTGGACAATCAGGTaGAGCTGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTT +
Preference number: 1 (lower is better)
Translates to: VHTFESQMYDNWTIR*SWKMRWLLKTVEDL
Trigger: AAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCAGCTTCACCTGATTGTCCAGTTATCATACATTTGACTTTCAAATGTATGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR-3UTR CCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTTTGTAGAGAGGTCTaGTCCTGGACCCACCGTCAG +
Preference number: 2 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVFCREV*SWTHRQ
Trigger: CTGACGGTGGGTCCAGGACCAGACCTCTCTACAAAA...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR-3UTR TCA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCGTATCTGTAAAACCGTaGGCGGCTGGGAAGCCCACA +
Preference number: 2 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVVSVKP*AAGKPT
Trigger: TGTGGGCTTCCCAGCCGCTCACGGTTTTACAGATAC...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR TCA 90 bp CCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTTGGAGTGGAGTGGCATaGTCTTGGCTCACAGCAACC +
Preference number: 2 (lower is better)
Translates to: PPGFRADSVLCLPLSVPAWSGVA*SWLTAT
Trigger: GGTTGCTGTGAGCCAAGATCATGCCACTCCACTCCA...AGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR GCA 90 bp AGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTAAATGCTCACCACGGGAGGGTGTaGGTTCTCCCAAGGGAGTTT +
Preference number: 2 (lower is better)
Translates to: RSDGWPQGVVWASGVLNAHHGRV*VLPREF
Trigger: AAACTCCCTTGGGAGAACGCACACCCTCCCGTGGTG...AGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTGAGAAAGGATCCCTTTaGGGGTCCCAGACAAAGATC +
Preference number: 2 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVEKGSL*GSQTKI
Trigger: GATCTTTGTCTGGGACCCCCAAAGGGATCCTTTCTC...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR CAA 90 bp GGAGGGCCAGATCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTaGCCATTGAGTGTGCCGGCTCTTCAAGCCTTGACAGCAGGTTTT +
Preference number: 2 (lower is better)
Translates to: GGPDPPGFRADSVLC*PLSVPALQALTAGF
Trigger: AAAACCTGCTGTCAAGGCTTGAAGAGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGATCTGGCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR-3UTR TCA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCGTATCTGTAAAACCGTaGGCGGCTGGGAAGCCCACA +
Preference number: 2 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTVSVKP*AAGKPT
Trigger: TGTGGGCTTCCCAGCCGCTCACGGTTTTACAGATAC...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR TCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTCCTGGCTTAAGCATTTaGAAAAGCAGCCGAGGAGTT +
Preference number: 2 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVPGLSI*KSSRGV
Trigger: AACTCCTCGGCTGCTTTTTCAAATGCTTAAGCCAGG...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp CCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTTTTTGTAGAGAGGTCTaGTCCTGGACCCACCGTCAG +
Preference number: 2 (lower is better)
Translates to: PPGFRADSVLCLPLSVPAFCREV*SWTHRQ
Trigger: CTGACGGTGGGTCCAGGACCAGACCTCTCTACAAAA...AGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR-3UTR TCA 90 bp TGTAGCAGGGCAACAGGTGGGAAGAAGGTCAGCAGGGAAACATGTGAGCAAAGGTGGAGTGGAGTGGCATaGTCTTGGCTCACAGCAACC +
Preference number: 2 (lower is better)
Translates to: CSRATGGKKVSRETCEQRWSGVA*SWLTAT
Trigger: GGTTGCTGTGAGCCAAGATCATGCCACTCCACTCCA...CCTTTGCTCACATGTTTCCCTGCTGACCTTCTTCCCACCTGTTGCCCTGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR GCA 90 bp TGTAGCAGGGCAACAGGTGGGAAGAAGGTCAGCAGGGAAACATGTGAGCAAAGGGTCCCTGCAGCTTTCTaGTGTGCATTGTGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: CSRATGGKKVSRETCEQRVPAAF*CALCPW
Trigger: CCAGGGACACAATGCACAGCAGAAAGCTGCAGGGAC...CCTTTGCTCACATGTTTCCCTGCTGACCTTCTTCCCACCTGTTGCCCTGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTGAGAAAGGATCCCTTTaGGGGTCCCAGACAAAGATC +
Preference number: 2 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGEKGSL*GSQTKI
Trigger: GATCTTTGTCTGGGACCCCCAAAGGGATCCTTTCTC...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR-3UTR CCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCAGCAGCCAGAGTAGCTaGAATTACAGGCCTATGCCA +
Preference number: 2 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGSSQSS*NYRPMP
Trigger: TGGCATAGGCCTGTAATTCCAGCTACTCTGGCTGCT...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp CCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTAGCAGCCAGAGTAGCTaGAATTACAGGCCTATGCCA +
Preference number: 2 (lower is better)
Translates to: PPGFRADSVLCLPLSVPASSQSS*NYRPMP
Trigger: TGGCATAGGCCTGTAATTCCAGCTACTCTGGCTGCT...AGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp TGTAGCAGGGCAACAGGTGGGAAGAAGGTCAGCAGGGAAACATGTGAGCAAAGGTCGCCCAGACTGGAGTaGAGTGGCATGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: CSRATGGKKVSRETCEQRSPRLE*SGMILA
Trigger: AGCCAAGATCATGCCACTCCACTCCAGTCTGGGCGA...CCTTTGCTCACATGTTTCCCTGCTGACCTTCTTCCCACCTGTTGCCCTGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR GCA 90 bp ACACACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAACACCACGGGAGGGTGTaGGTTCTCCCAAGGGAGTTT +
Preference number: 2 (lower is better)
Translates to: THHGGMSAQTSNVVWGCKHHGRV*VLPREF
Trigger: AAACTCCCTTGGGAGAACGCACACCCTCCCGTGGTG...TTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp GCCAGCATATCTCACCTCCAGCCACAGGGCGGTTTTCTCCTATCTCAGAATAGATCGCCCAGACTGGAGTaGAGTGGCATGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: ASISHLQPQGGFLLSQNRSPRLE*SGMILA
Trigger: AGCCAAGATCATGCCACTCCACTCCAGTCTGGGCGA...TCTATTCTGAGATAGGAGAAAACCGCCCTGTGGCTGGAGGTGAGATATGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR GCA 90 bp CCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTTGCAGCTTTCTGCTGTaGATTGTGTCCCTGGTTAAT +
Preference number: 2 (lower is better)
Translates to: PPGFRADSVLCLPLSVPACSFLL*IVSLVN
Trigger: ATTAACCAGGGACACAATGCACAGCAGAAAGCTGCA...AGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTGGGCTGAGCACTCCTaGCTTAAGCATTTGAAAAAG +
Preference number: 2 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGWAEHS*LKHLKK
Trigger: CTTTTTCAAATGCTTAAGCCAGGAGTGCTCAGCCCA...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR CAA 90 bp ATCGTGTCATGGCTACCACTAAGGGTACAGGGATGGAATGTCCCTTaGTCGCTCCAGCTTATTGGAGGGTGGGTGGACAAATGTCGACAT +
Preference number: 2 (lower is better)
Translates to: IVSWLPLRVQGWNVP*SLQLIGGWVDKCRH
Trigger: ATGTCGACATTTGTCCACCCACCCTCCAATAAGCTGGAGCGACAAAGGGACATTCCATCCCTGTACCCTTAGTGGTAGCCATGACACGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR TCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGCCTGGCTTAAGCATTTaGAAAAGCAGCCGAGGAGTT +
Preference number: 2 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKPGLSI*KSSRGV
Trigger: AACTCCTCGGCTGCTTTTTCAAATGCTTAAGCCAGG...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR TCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATCCTCACAGTGGCTCCTaGCTCCTTTTCCAATGCACC +
Preference number: 2 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDPHSGS*LLFQCT
Trigger: GGTGCATTGGAAAAGGAGTCAGGAGCCACTGTGAGG...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp CCTTCCTCTTATCTCAACTGCAAAGAGGCCTCCCTCCTTCACTATTCCTCCTCATTTTGTAGAGAGGTCTaGTCCTGGACCCACCGTCAG +
Preference number: 2 (lower is better)
Translates to: PSSYLNCKEASLLHYSSSFCREV*SWTHRQ
Trigger: CTGACGGTGGGTCCAGGACCAGACCTCTCTACAAAA...TGAGGAGGAATAGTGAAGGAGGGAGGCCTCTTTGCAGTTGAGATAAGAGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTCACAGACTTCTAATGTaGTTTGGGGTTGCAAACTGT +
Preference number: 2 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGHRLLM*FGVANC
Trigger: ACAGTTTGCAACCCCAAACCACATTAGAAGTCTGTG...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR-3UTR CCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCCCATGGGGTACATGCTaGTTCATACATTTGAAAGTC +
Preference number: 2 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGPWGTC*FIHLKV
Trigger: GACTTTCAAATGTATGAACCAGCATGTACCCCATGG...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR CAA 90 bp TCTTTACCCAAACATCTCAGTGTAGCAAGGAGTAACAGAGCAGTATaGCTGCCAGCATATCTCACCTCCAGCCACAGGGCGGTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: SLPKHLSVARSNRAV*LPAYLTSSHRAVFS
Trigger: GGAGAAAACCGCCCTGTGGCTGGAGGTGAGATATGCTGGCAGCAATACTGCTCTGTTACTCCTTGCTACACTGAGATGTTTGGGTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR TCA 90 bp ACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTTAGAGCAGGTCTTTCCCTTCCCATaGGGCCATATCTCAGGCTGT +
Preference number: 2 (lower is better)
Translates to: TETLQNSMISRKHWTLEQVFPFP*GHISGC
Trigger: ACAGCCTGAGATATGGCCTCATGGGAAGGGAAAGAC...CTGCTCTAACGTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR TCA 90 bp ACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTTAGAGCAGACTCACAGTGGCTCCTaGCTCCTTTTCCAATGCACC +
Preference number: 2 (lower is better)
Translates to: TETLQNSMISRKHWTLEQTHSGS*LLFQCT
Trigger: GGTGCATTGGAAAAGGAGTCAGGAGCCACTGTGAGT...CTGCTCTAACGTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456124.6
3UTR-3UTR CCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCGTAATATTAAGCCTATaGGAAAGTCAGAGCCACTTT +
Preference number: 2 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGVILSL*ESQSHF
Trigger: AAAGTGGCTCTGACTTTCCCATAGGCTTAATATTAC...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR TCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTAACTGTGAGTGGGGATTaGGAGGAGGGCCAGATCCTC +
Preference number: 2 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVTVSGD*EEGQIL
Trigger: GAGGATCTGGCCCTCCTCTCAATCCCCACTCACAGT...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp CCTTCCTCTTATCTCAACTGCAAAGAGGCCTCCCTCCTTCACTATTCCTCCTCATGGGCTGAGCACTCCTaGCTTAAGCATTTGAAAAAG +
Preference number: 2 (lower is better)
Translates to: PSSYLNCKEASLLHYSSSWAEHS*LKHLKK
Trigger: CTTTTTCAAATGCTTAAGCCAGGAGTGCTCAGCCCA...TGAGGAGGAATAGTGAAGGAGGGAGGCCTCTTTGCAGTTGAGATAAGAGGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp CCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTATAAGATTAAATCCATaGGGTACATGCTGGTTCATA +
Preference number: 2 (lower is better)
Translates to: PPGFRADSVLCLPLSVPAIRLNP*GTCWFI
Trigger: TATGAACCAGCATGTACCCCATGGATTTAATCTTAT...AGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR-3UTR CCA 90 bp TGTAGCAGGGCAACAGGTGGGAAGAAGGTCAGCAGGGAAACATGTGAGCAAAGGCTAAGATTTAAAGGGTaGAAGGGGAACACAGAAATT +
Preference number: 2 (lower is better)
Translates to: CSRATGGKKVSRETCEQRLRFKG*KGNTEI
Trigger: AATTTCTGTGTTCCCCTTCCACCCTTTAAATCTTAG...CCTTTGCTCACATGTTTCCCTGCTGACCTTCTTCCCACCTGTTGCCCTGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp TGTAGCAGGGCAACAGGTGGGAAGAAGGTCAGCAGGGAAACATGTGAGCAAAGGGTAATATTAAGCCTATaGGAAAGTCAGAGCCACTTT +
Preference number: 2 (lower is better)
Translates to: CSRATGGKKVSRETCEQRVILSL*ESQSHF
Trigger: AAAGTGGCTCTGACTTTCCCATAGGCTTAATATTAC...CCTTTGCTCACATGTTTCCCTGCTGACCTTCTTCCCACCTGTTGCCCTGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTAATACCCAGGCTTTCTTaGGCAGAGGTCCCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVIPRLS*AEVPAA
Trigger: AGCTGCAGGGACCTCTGCCCAAGAAAGCCTGGGTAT...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp ACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTTAGAGCAGCACAGACTTCTAATGTaGTTTGGGGTTGCAAACTGT +
Preference number: 2 (lower is better)
Translates to: TETLQNSMISRKHWTLEQHRLLM*FGVANC
Trigger: ACAGTTTGCAACCCCAAACCACATTAGAAGTCTGTG...CTGCTCTAACGTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR-3UTR CCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTAATCTCAAGGAAGCACTaGACGTTAGAGCAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVISRKH*TLEQEG
Trigger: CCCTTCCTGCTCTAACGTCCAGTGCTTCCTTGAGAT...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp ACACACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAATGTCCTCTAATATTTTaGTGTCTCTTCAGCCAAAAA +
Preference number: 2 (lower is better)
Translates to: THHGGMSAQTSNVVWGCKCPLIF*CLFSQK
Trigger: TTTTTGGCTGAAGAGACACCAAAATATTAGAGGACA...TTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp CACAGACACAGTAACAATCTGATCTTTCTTTTCCCCACATGGACTAATGCGATACACAGACTTCTAATGTaGTTTGGGGTTGCAAACTGT +
Preference number: 2 (lower is better)
Translates to: HRHSNNLIFLFPTWTNAIHRLLM*FGVANC
Trigger: ACAGTTTGCAACCCCAAACCACATTAGAAGTCTGTG...TATCGCATTAGTCCATGTGGGGAAAAGAAAGATCAGATTGTTACTGTGTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTAATTCTAGGGCTTTCCTaGAATGAAGGATGCAGTTAT +
Preference number: 2 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVILGLS*NEGCSY
Trigger: ATAACTGCATCCTTCATTCCAGGAAAGCCCTAGAAT...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR GCA 72 bp GCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTAAATaGTCCCAGGTGGTTGGAATGCGCTGCAAGGTGGGG +
Preference number: 3 (lower is better)
Translates to: APGCGVGIWSFK*SQVVGMRCKVG
Trigger: CCCCACCTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR-3UTR CAA 90 bp GCCAGCATATCTCACCTCCAGCCACAGGGCGGTTTTCTCCTATCTCAGAATAGATGGGGTTTCGCCATGTaGGCCAGGCTGGCCTCAAAC +
Preference number: 3 (lower is better)
Translates to: ASISHLQPQGGFLLSQNRWGFAM*ARLASN
Trigger: GTTTGAGGCCAGCCTGGCCAACATGGCGAAACCCCA...TCTATTCTGAGATAGGAGAAAACCGCCCTGTGGCTGGAGGTGAGATATGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CAA 90 bp TGTAGCAGGGCAACAGGTGGGAAGAAGGTCAGCAGGGAAACATGTGAGCAAAGGAATACCCAGGCTTTCTaGGGCAGAGGTCCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: CSRATGGKKVSRETCEQRNTQAF*GRGPCS
Trigger: GCTGCAGGGACCTCTGCCCAAGAAAGCCTGGGTATT...CCTTTGCTCACATGTTTCCCTGCTGACCTTCTTCCCACCTGTTGCCCTGCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR CCA 72 bp AGATTTGGCTGCACATCGGATCACCTAGGGAGTTTTTaGGGCCATGGAGGCCCAGGTCTTGCTTCCAGAAGG +
Preference number: 3 (lower is better)
Translates to: RFGCTSDHLGSF*GHGGPGLASRR
Trigger: CCTTCTGGAAGCAAGACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR TCA 72 bp CCTGGTATTCAAGGCTTACGCACCCTGACTGATGACTaGTCCCAGGTGGCCCTGAGTTGTAAGACGGTGACT +
Preference number: 3 (lower is better)
Translates to: PGIQGLRTLTDD*SQVALSCKTVT
Trigger: AGTCACCGTCTTACAACTCAGGGCCACCTGGGATCAGTCATCAGTCAGGGTGCGTAAGCCTTGAATACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR CCA 72 bp GCCATCGTGTCATGGCTACCACTAAGGGTACAGGGATaGAATGTCCCTTTGTCGCTCCAGCTTATTGGAGGG +
Preference number: 3 (lower is better)
Translates to: AIVSWLPLRVQG*NVPLSLQLIGG
Trigger: CCCTCCAATAAGCTGGAGCGACAAAGGGACATTCCATCCCTGTACCCTTAGTGGTAGCCATGACACGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR TCA 72 bp CTTGGCTCACAGCAACCGCCACCTCCTAGGTTCAAATaGTTCTTGTGCCTCAGCAGCCAGAGTAGCTGGAAT +
Preference number: 3 (lower is better)
Translates to: LGSQQPPPPRFK*FLCLSSQSSWN
Trigger: ATTCCAGCTACTCTGGCTGCTGAGGCACAAGAATCATTTGAACCTAGGAGGTGGCGGTTGCTGTGAGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR CCA 72 bp ACAGGGATGGAATGTCCCTTTGTCGCTCCAGCTTATTaGAGGGTGGGTGGACAAATGTCGACATGGCCACTT +
Preference number: 3 (lower is better)
Translates to: TGMECPFVAPAY*RVGGQMSTWPL
Trigger: AAGTGGCCATGTCGACATTTGTCCACCCACCCTCCAATAAGCTGGAGCGACAAAGGGACATTCCATCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR CCA 72 bp AAGCTTTCCGGAGTCCATGATCTGGCCATCGTGTCATaGCTACCACTAAGGGTACAGGGATGGAATGTCCCT +
Preference number: 3 (lower is better)
Translates to: KLSGVHDLAIVS*LPLRVQGWNVP
Trigger: AGGGACATTCCATCCCTGTACCCTTAGTGGTAGCCATGACACGATGGCCAGATCATGGACTCCGGAAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CAA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCGTCCCAGGTGAGTGTTaGTGTCTTCAAAGATATCTG +
Preference number: 3 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGVPGEC*CLQRYL
Trigger: CAGATATCTTTGAAGACACAAACACTCACCTGGGAC...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR-3UTR CAA 90 bp TGTAGCAGGGCAACAGGTGGGAAGAAGGTCAGCAGGGAAACATGTGAGCAAAGGGTGGTCTTGATAGAGTaGGCCACGATGTCCAAATGT +
Preference number: 3 (lower is better)
Translates to: CSRATGGKKVSRETCEQRVVLIE*ATMSKC
Trigger: ACATTTGGACATCGTGGCCAACTCTATCAAGACCAC...CCTTTGCTCACATGTTTCCCTGCTGACCTTCTTCCCACCTGTTGCCCTGCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR GCA 72 bp GCTTTCTTGGGCAGAGGTCCCTGCAGCTTTCTGCTGTaGATTGTGTCCCTGGTTAATCGAGAATGGAGAATG +
Preference number: 3 (lower is better)
Translates to: AFLGRGPCSFLL*IVSLVNREWRM
Trigger: CATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGCAGGGACCTCTGCCCAAGAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR CCA 72 bp TGGAATGTCCCTTTGTCGCTCCAGCTTATTGGAGGGTaGGTGGACAAATGTCGACATGGCCACTTTTGTGCA +
Preference number: 3 (lower is better)
Translates to: WNVPLSLQLIGG*VDKCRHGHFCA
Trigger: TGCACAAAAGTGGCCATGTCGACATTTGTCCACCCACCCTCCAATAAGCTGGAGCGACAAAGGGACATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CAA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGAAGAGAAAGGATCCCTTaGGGGGTCCCAGACAAAGAT +
Preference number: 3 (lower is better)
Translates to: AAFCCALCPWLIENGEWRRERIP*GVPDKD
Trigger: ATCTTTGTCTGGGACCCCCAAAGGGATCCTTTCTCT...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CAA 90 bp GCCAGCATATCTCACCTCCAGCCACAGGGCGGTTTTCTCCTATCTCAGAATAGAGTGGTATTTGTGGTCTaGATAGAGTTGGCCACGATG +
Preference number: 3 (lower is better)
Translates to: ASISHLQPQGGFLLSQNRVVFVV*IELATM
Trigger: CATCGTGGCCAACTCTATCAAGACCACAAATACCAC...TCTATTCTGAGATAGGAGAAAACCGCCCTGTGGCTGGAGGTGAGATATGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR TCA 72 bp CTCAGCATGTGGAGGACCCGCACCGGCGCTGGCCTCTaGGTTCCCTCAGTATTTATTGATCATTATTTTTAC +
Preference number: 3 (lower is better)
Translates to: LSMWRTRTGAGL*VPSVFIDHYFY
Trigger: GTAAAAATAATGATCAATAAATACTGAGGGAACTCAGAGGCCAGCGCCGGTGCGGGTCCTCCACATGCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR GCA 72 bp ACAAGCAGGAGACAGAAGCCTTCCTCTTATCTCAACTaGAAAGAGGCCTCCCTCCTTCACTATTCCTCCTCA +
Preference number: 3 (lower is better)
Translates to: TSRRQKPSSYLN*KEASLLHYSSS
Trigger: TGAGGAGGAATAGTGAAGGAGGGAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCTTCTGTCTCCTGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR CCA 72 bp ATGTCCCTTTGTCGCTCCAGCTTATTGGAGGGTGGGTaGACAAATGTCGACATGGCCACTTTTGTGCAGTAT +
Preference number: 3 (lower is better)
Translates to: MSLCRSSLLEGG*TNVDMATFVQY
Trigger: ATACTGCACAAAAGTGGCCATGTCGACATTTGTCCACCCACCCTCCAATAAGCTGGAGCGACAAAGGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CAA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTTTGTCCTCTAATATTTaGGTGTCTCTTCAGCCAAAA +
Preference number: 3 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGLSSNI*VSLQPK
Trigger: TTTTGGCTGAAGAGACACCAAAATATTAGAGGACAA...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CAA 90 bp CCTTCCTCTTATCTCAACTGCAAAGAGGCCTCCCTCCTTCACTATTCCTCCTCAGTGGTCTTGATAGAGTaGGCCACGATGTCCAAATGT +
Preference number: 3 (lower is better)
Translates to: PSSYLNCKEASLLHYSSSVVLIE*ATMSKC
Trigger: ACATTTGGACATCGTGGCCAACTCTATCAAGACCAC...TGAGGAGGAATAGTGAAGGAGGGAGGCCTCTTTGCAGTTGAGATAAGAGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR CCA 72 bp CACACCACGGAGGGATGTCTGCACAGACTTCTAATGTaGTTTGGGGTTGCAAACTGTAGTTGGGGCAATTTT +
Preference number: 3 (lower is better)
Translates to: HTTEGCLHRLLM*FGVANCSWGNF
Trigger: AAAATTGCCCCAACTACAGTTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR-3UTR CAA 90 bp ACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTTAGAGCAGAGAGAAAGGATCCCTTaGGGGGTCCCAGACAAAGAT +
Preference number: 3 (lower is better)
Translates to: TETLQNSMISRKHWTLEQRERIP*GVPDKD
Trigger: ATCTTTGTCTGGGACCCCCAAAGGGATCCTTTCTCT...CTGCTCTAACGTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
3UTR-3UTR CAA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTAAGTGATCCACCCACCTaGACCCCCAAGGTGCTAGGA +
Preference number: 3 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVSDPPT*TPKVLG
Trigger: TCCTAGCACCTTGGGGGTCAAGGTGGGTGGATCACT...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CAA 90 bp CACAGACACAGTAACAATCTGATCTTTCTTTTCCCCACATGGACTAATGCGATATGGAGTGGCATGATCTaGGCTCACAGCAACCGCCAC +
Preference number: 3 (lower is better)
Translates to: HRHSNNLIFLFPTWTNAIWSGMI*AHSNRH
Trigger: GTGGCGGTTGCTGTGAGCCAAGATCATGCCACTCCA...TATCGCATTAGTCCATGTGGGGAAAAGAAAGATCAGATTGTTACTGTGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR TCA 72 bp AGGCACATCCTGCACAGCCCTAAATCCATTAAACTTTaGTTCATTACAGCGCATGTTTCTGTGAGCACAGAG +
Preference number: 3 (lower is better)
Translates to: RHILHSPKSIKL*FITAHVSVSTE
Trigger: CTCTGTGCTCACAGAAACATGCGCTGTAATGAATCAAAGTTTAATGGATTTAGGGCTGTGCAGGATGTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR TCA 72 bp TTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGATaGCTTCTACCAAGCATACAGCCTGCAAACATATTG +
Preference number: 3 (lower is better)
Translates to: LCPWLIENGEWR*LLPSIQPANIL
Trigger: CAATATGTTTGCAGGCTGTATGCTTGGTAGAAGTCATCGCCATTCTCCATTCTCGATTAACCAGGGACACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR TCA 72 bp TTTGCAATGTGCCCTAATTCTAGGGCTTTCCTGGAATaGAGGATGCAGTTATCTTTGAGACCGGCTTTCATA +
Preference number: 3 (lower is better)
Translates to: FAMCPNSRAFLE*RMQLSLRPAFI
Trigger: TATGAAAGCCGGTCTCAAAGATAACTGCATCCTTCATTCCAGGAAAGCCCTAGAATTAGGGCACATTGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CAA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTAGGATGCAGTTATCTTaGAGACCGGCTTTCATAGCC +
Preference number: 3 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFRMQLS*RPAFIA
Trigger: GGCTATGAAAGCCGGTCTCAAAGATAACTGCATCCT...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR-3UTR CAA 90 bp CACAGACACAGTAACAATCTGATCTTTCTTTTCCCCACATGGACTAATGCGATATTGTCCTCTAATATTTaGGTGTCTCTTCAGCCAAAA +
Preference number: 3 (lower is better)
Translates to: HRHSNNLIFLFPTWTNAILSSNI*VSLQPK
Trigger: TTTTGGCTGAAGAGACACCAAAATATTAGAGGACAA...TATCGCATTAGTCCATGTGGGGAAAAGAAAGATCAGATTGTTACTGTGTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTGCCGCGCTTTCTCCATaGCCCCGGCCTCGGCGCGCT +
Preference number: 4 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVAALSP*PRPRRA
Trigger: AGCGCGCCGAGGCCGGGGCCATGGAGAAAGCGCGGC...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTGCGCCGATGCTGCCCTaGCGCATGCGCTGCCCCACA +
Preference number: 4 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVAPMLP*RMRCPT
Trigger: TGTGGGGCAGCGCATGCGGCAGGGCAGCATCGGCGC...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTCCAGGCGCCGATGCTaGCCTGCCGCATGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVSRRRC*PAACAA
Trigger: GGCAGCGCATGCGGCAGGGCAGCATCGGCGCCTGGA...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCGCGCCGATGCTGCCCTaGCGCATGCGCTGCCCCACA +
Preference number: 4 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGAPMLP*RMRCPT
Trigger: TGTGGGGCAGCGCATGCGGCAGGGCAGCATCGGCGC...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp CTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCCGGGCCGCCAGGGGGATaGACATGGTGGAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LVLDPPSETLEKGSLWGSGPPGG*TWWRRP
Trigger: TGGCCTCCTCCACCATGTGCATCCCCCTGGCGGCCC...GGACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTCAGGCCACGGGGTCTaGGTCTCCCCTCTTGAGGCG +
Preference number: 4 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVSGHGV*VSPLEA
Trigger: CGCCTCAAGAGGGGAGACGCAGACCCCGTGGCCTGA...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp AGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTAAATGCTTCCAGGCGCCGATGCTaGCCTGCCGCATGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: RSDGWPQGVVWASGVLNASRRRC*PAACAA
Trigger: GGCAGCGCATGCGGCAGGGCAGCATCGGCGCCTGGA...AGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTGTCTGTCAGAGGGGTaGGGATGGCCGCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVCLSEG*GWPLCS
Trigger: GGAACACAGCGGCCATCCTCACCCCTCTGACAGACA...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp AGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTAAATGCTAGCGCCGGCTCCCACTaGACACCCCCGTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RSDGWPQGVVWASGVLNASAGSH*TPPFSW
Trigger: CCAGGAGAACGGGGGTGTGCAGTGGGAGCCGGCGCT...AGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCTCAGGCCACGGGGTCTaGGTCTCCCCTCTTGAGGCG +
Preference number: 4 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVSGHGV*VSPLEA
Trigger: CGCCTCAAGAGGGGAGACGCAGACCCCGTGGCCTGA...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp AGGGGTAACGACCTACTCACAGTGGCTCCTGACTCCTTTTCCAATGCACCAAGAGCCGCGCTTTCTCCATaGCCCCGGCCTCGGCGCGCT +
Preference number: 4 (lower is better)
Translates to: RGNDLLTVAPDSFSNAPRAALSP*PRPRRA
Trigger: AGCGCGCCGAGGCCGGGGCCATGGAGAAAGCGCGGC...TCTTGGTGCATTGGAAAAGGAGTCAGGAGCCACTGTGAGTAGGTCGTTACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456124.6
CDS-3UTR CCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTACACCACCTTGCCAGTaGACTCGGTGCCACGCAGGA +
Preference number: 4 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVTPPCQ*TRCHAG
Trigger: TCCTGCGTGGCACCGAGTCCACTGGCAAGGTGGTGT...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTACACCAGACCTGAGATaGCCTCCTTGGGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVTPDLR*PPWAGG
Trigger: GCCACCTGCCCAAGGAGGCCATCTCAGGTCTGGTGT...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp CACCACGGGAGGGTGTGCGTTCTCCCAAGGGAGTTTTCTTCCTGCACACCTTCCGGGGGATGCACATGGTaGAGGAGGCCACAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: HHGRVCVLPREFSSCTPSGGCTW*RRPQAA
Trigger: GGCTGCTTGTGGCCTCCTCCACCATGTGCATCCCCC...GGAAGGTGTGCAGGAAGAAAACTCCCTTGGGAGAACGCACACCCTCCCGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCGACCCGCACCGGCGCTaGCCTCTGAGTTCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGDPHRR*PLSSLS
Trigger: ACTGAGGGAACTCAGAGGCCAGCGCCGGTGCGGGTC...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCGAGGCGTCCCAGGCTTaGTACTTCAGGGTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGEASQA*YFRVPV
Trigger: CACGGGGACCCTGAAGTATCAAGCCTGGGACGCCTC...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTGAGGCGTCCCAGGCTTaGTACTTCAGGGTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGEASQA*YFRVPV
Trigger: CACGGGGACCCTGAAGTATCAAGCCTGGGACGCCTC...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp CCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTGAGGCGTCCCAGGCTTaGTACTTCAGGGTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: PPGFRADSVLCLPLSVPAEASQA*YFRVPV
Trigger: CACGGGGACCCTGAAGTATCAAGCCTGGGACGCCTC...AGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp CTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCCCTCTTGAGGCGACGCTaGACAAAAGTCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LVLDPPSETLEKGSLWGSLLRRR*TKVPRA
Trigger: GGCCCTGGGGACTTTTGTTCAGCGTCGCCTCAAGAG...GGACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCTGCTGCCCTGCCGCATaGGCTGCCCCACAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTCCPAA*AAPQPV
Trigger: AACTGGCTGTGGGGCAGCGCATGCGGCAGGGCAGCA...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp CACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAACTGGCGCCGATGCTGCCCTaGCGCATGCGCTGCCCCACA +
Preference number: 4 (lower is better)
Translates to: HHGGMSAQTSNVVWGCKLAPMLP*RMRCPT
Trigger: TGTGGGGCAGCGCATGCGGCAGGGCAGCATCGGCGC...CAGTTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCCGGTGCCACGCAGGATaGACAGGTACACCACCAGCC +
Preference number: 4 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGRCHAG*TGTPPA
Trigger: GGCTGGTGGTGTACCTGTGCATCCTGCGTGGCACCG...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTCACCACGGGAGGGTGTaGGTTCTCCCAAGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVHHGRV*VLPREF
Trigger: AAACTCCCTTGGGAGAACGCACACCCTCCCGTGGTG...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGAGCCGCGCTTTCTCCATaGCCCCGGCCTCGGCGCGCT +
Preference number: 4 (lower is better)
Translates to: AAFCCALCPWLIENGEWRAALSP*PRPRRA
Trigger: AGCGCGCCGAGGCCGGGGCCATGGAGAAAGCGCGGC...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGGCCAGGCCAGTGCCCTaGACGGCCGTGTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKARPVP*TAVSSS
Trigger: GGAGCTAGACACGGCCGTCCAGGGCACTGGCCTGGC...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp GTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCTACTCACAGTGGGCCAGGCCAGTGCCCTaGACGGCCGTGTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: VRAGRDSLTLGVTTYSQWARPVP*TAVSSS
Trigger: GGAGCTAGACACGGCCGTCCAGGGCACTGGCCTGGC...CCACTGTGAGTAGGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456124.6
CDS-3UTR CCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTGCCTCCTTGGGCAGGTaGCTGGAGATGATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVASLGR*LEMILL
Trigger: CAGCAAGATCATCTCCAGCCACCTGCCCAAGGAGGC...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp CTCCTCAGCACCGACCCTTTACAGGTGTCGGGCTGGGGGACAGTCAGGTCTTTCATGCTCCCAGGTGGTTaGAATGCGCTGCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLSTDPLQVSGWGTVRSFMLPGG*NALQGG
Trigger: CCCACCTTGCAGCGCATTCCAACCACCTGGGAGCAT...GAAAGACCTGACTGTCCCCCAGCCCGACACCTGTAAAGGGTCGGTGCTGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTCTGGGTGGCTGCATTaGTCCAGGCCTTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGSGWLH*SRPWGW
Trigger: CCAACCCCAAGGCCTGGATCAATGCAGCCACCCAGA...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCAAGGCACACCAGACCTaGGATGGCCTCCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVKAHQT*DGLLGQ
Trigger: CTGCCCAAGGAGGCCATCTCAGGTCTGGTGTGCCTT...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCAAGGCACACCAGACCTaGGATGGCCTCCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGKAHQT*DGLLGQ
Trigger: CTGCCCAAGGAGGCCATCTCAGGTCTGGTGTGCCTT...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp CTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCCACTGTGAGTGGGGATTaGGAGGAGGGCCAGATCCTC +
Preference number: 4 (lower is better)
Translates to: LVLDPPSETLEKGSLWGSTVSGD*EEGQIL
Trigger: GAGGATCTGGCCCTCCTCTCAATCCCCACTCACAGT...GGACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTCCACGGCGTACGAGATaGAGGCGAACACGAACTGTA +
Preference number: 4 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVPRRTR*RRTRTV
Trigger: TACAGTTCGTGTTCGCCTGCATCTCGTACGCCGTGG...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCTGCCAGTGGACTCGGTaGCACGCAGGATGCACAGGT +
Preference number: 4 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVCQWTR*HAGCTG
Trigger: ACCTGTGCATCCTGCGTGGCACCGAGTCCACTGGCA...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp CACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAACTGGGGCCGCCAGGGGGATaGACATGGTGGAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HHGGMSAQTSNVVWGCKLGPPGG*TWWRRP
Trigger: TGGCCTCCTCCACCATGTGCATCCCCCTGGCGGCCC...CAGTTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCCCCAGGTGGTTGGAATaGGCTGCAAGGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGPRWLE*AARWGH
Trigger: GTGTCCCCACCTTGCAGCGCATTCCAACCACCTGGG...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp CTCCTCAGCACCGACCCTTTACAGGTGTCGGGCTGGGGGACAGTCAGGTCTTTCGTGGTTACCATTCAGTaGGCAGACAGACCACGGCAG +
Preference number: 4 (lower is better)
Translates to: LLSTDPLQVSGWGTVRSFVVTIQ*ADRPRQ
Trigger: CTGCCGTGGTCTGTCTGCCCACTGAATGGTAACCAC...GAAAGACCTGACTGTCCCCCAGCCCGACACCTGTAAAGGGTCGGTGCTGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CACCACGGGAGGGTGTGCGTTCTCCCAAGGGAGTTTTCTTCCTGCACACCTTCCACACCCCCGTTCTCCTaGAGGGACGGCGAGATATTG +
Preference number: 4 (lower is better)
Translates to: HHGRVCVLPREFSSCTPSTPPFS*RDGEIL
Trigger: CAATATCTCGCCGTCCCTCCAGGAGAACGGGGGTGT...GGAAGGTGTGCAGGAAGAAAACTCCCTTGGGAGAACGCACACCCTCCCGTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp CTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCCCCAGCATCAGCAGCATaGAGAAGTAGAGCACCGACC +
Preference number: 4 (lower is better)
Translates to: LVLDPPSETLEKGSLWGSPASAA*RSRAPT
Trigger: GGTCGGTGCTCTACTTCTTCATGCTGCTGATGCTGG...GGACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGCCACAAGCAGCCCGATaGCAGCCAGTGCATAGGCCG +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKPQAAR*QPVHRP
Trigger: CGGCCTATGCACTGGCTGTCATCGGGCTGCTTGTGG...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp CACCACGGGAGGGTGTGCGTTCTCCCAAGGGAGTTTTCTTCCTGCACACCTTCCGCTTTCCGGAGTCCATaGTCTGGCCATCGTGTCATG +
Preference number: 4 (lower is better)
Translates to: HHGRVCVLPREFSSCTPSAFRSP*SGHRVM
Trigger: CATGACACGATGGCCAGATCATGGACTCCGGAAAGC...GGAAGGTGTGCAGGAAGAAAACTCCCTTGGGAGAACGCACACCCTCCCGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp CCTTCCTCTTATCTCAACTGCAAAGAGGCCTCCCTCCTTCACTATTCCTCCTCAAGCGCCGGCTCCCACTaGACACCCCCGTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PSSYLNCKEASLLHYSSSSAGSH*TPPFSW
Trigger: CCAGGAGAACGGGGGTGTGCAGTGGGAGCCGGCGCT...TGAGGAGGAATAGTGAAGGAGGGAGGCCTCTTTGCAGTTGAGATAAGAGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp CTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCCGAAGATCTGGGTGGCTaGATTGATCCAGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LVLDPPSETLEKGSLWGSEDLGG*IDPGLG
Trigger: CCCAAGGCCTGGATCAATGCAGCCACCCAGATCTTC...GGACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGCCATTGGTGGCTCCGTaGAGCGTGAGGCCCCTGATG +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKPLVAP*SVRPLM
Trigger: CATCAGGGGCCTCACGCTCCACGGAGCCACCAATGG...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp AGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTAAATGCTACACCAGACCTGAGATaGCCTCCTTGGGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSDGWPQGVVWASGVLNATPDLR*PPWAGG
Trigger: GCCACCTGCCCAAGGAGGCCATCTCAGGTCTGGTGT...AGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp CACCACGGGAGGGTGTGCGTTCTCCCAAGGGAGTTTTCTTCCTGCACACCTTCCGCTGACAATCAGCAGTaGGCTTACGCCAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: HHGRVCVLPREFSSCTPSADNQQ*AYASPH
Trigger: ATGTGGGCTGGCGTAAGCCCACTGCTGATTGTCAGC...GGAAGGTGTGCAGGAAGAAAACTCCCTTGGGAGAACGCACACCCTCCCGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp TGTAGCAGGGCAACAGGTGGGAAGAAGGTCAGCAGGGAAACATGTGAGCAAAGGTCTTTGGTCACGAGCTaGCCCTGGGAGGCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: CSRATGGKKVSRETCEQRSLVTS*PWEASQ
Trigger: CTGGGACGCCTCCCAGGGCCAGCTCGTGACCAAAGA...CCTTTGCTCACATGTTTCCCTGCTGACCTTCTTCCCACCTGTTGCCCTGCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp TGTAGCAGGGCAACAGGTGGGAAGAAGGTCAGCAGGGAAACATGTGAGCAAAGGGGGGGATGCACATGGTaGAGGAGGCCACAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: CSRATGGKKVSRETCEQRGGCTW*RRPQAA
Trigger: GGCTGCTTGTGGCCTCCTCCACCATGTGCATCCCCC...CCTTTGCTCACATGTTTCCCTGCTGACCTTCTTCCCACCTGTTGCCCTGCTACA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTATGCTCCCAGGTGGTTaGAATGCGCTGCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PPGFRADSVLCLPLSVPAMLPGG*NALQGG
Trigger: CCCACCTTGCAGCGCATTCCAACCACCTGGGAGCAT...AGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTCACCTAGGGAGTTTTTaGGGCCATGGAGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGHLGSF*GHGGPG
Trigger: ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTG...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp CTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCCGGGACGGCGAGATATTaGGGGTTTTCCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: LVLDPPSETLEKGSLWGSGTARY*GFSCTR
Trigger: TCTGGTACAGGAAAACCCTCAATATCTCGCCGTCCC...GGACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp CTCCTCAGCACCGACCCTTTACAGGTGTCGGGCTGGGGGACAGTCAGGTCTTTCCCAAGCTGCAGTTTTTaGTTTGCGGGAACATCTCGC +
Preference number: 4 (lower is better)
Translates to: LLSTDPLQVSGWGTVRSFPSCSF*FAGTSR
Trigger: GCGAGATGTTCCCGCAAATCAAAAACTGCAGCTTGG...GAAAGACCTGACTGTCCCCCAGCCCGACACCTGTAAAGGGTCGGTGCTGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCCCAGCATCAGCAGCATaGAGAAGTAGAGCACCGACC +
Preference number: 4 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVPASAA*RSRAPT
Trigger: GGTCGGTGCTCTACTTCTTCATGCTGCTGATGCTGG...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp AGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTAAATGCTACTTCAGGGTCCCCGTaGGGATGTAGTCGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RSDGWPQGVVWASGVLNATSGSP*GCSRSG
Trigger: ACCTGAGCGACTACATCCTCACGGGGACCCTGAAGT...AGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCACTGTGAGTGGGGATTaGGAGGAGGGCCAGATCCTC +
Preference number: 4 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTTVSGD*EEGQIL
Trigger: GAGGATCTGGCCCTCCTCTCAATCCCCACTCACAGT...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp AGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTAAATGCTACCCTGACTGATGACTaGTCCCAGGTGGCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: RSDGWPQGVVWASGVLNATLTDD*SQVALS
Trigger: ACTCAGGGCCACCTGGGATCAGTCATCAGTCAGGGT...AGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCGCTTTCCGGAGTCCATaGTCTGGCCATCGTGTCATG +
Preference number: 4 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVAFRSP*SGHRVM
Trigger: CATGACACGATGGCCAGATCATGGACTCCGGAAAGC...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATTCCTCCAGGCGCCGATaGTGCCCTGCCGCATGCGCT +
Preference number: 4 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDSSRRR*CPAACA
Trigger: AGCGCATGCGGCAGGGCAGCATCGGCGCCTGGAGGA...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp GCCAGCATATCTCACCTCCAGCCACAGGGCGGTTTTCTCCTATCTCAGAATAGACGAAGGCGATCAGGCTaGCGAAGCCCAGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: ASISHLQPQGGFLLSQNRRRRSG*RSPGQV
Trigger: CACTTGGCCTGGGCTTCGGCAGCCTGATCGCCTTCG...TCTATTCTGAGATAGGAGAAAACCGCCCTGTGGCTGGAGGTGAGATATGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCGCTTGGGTAGGCAGATaGGAGGTAGCCCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTAWVGR*EVALHL
Trigger: CAGGTGAAGGGCTACCTCGCATCTGCCTACCCAAGC...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp CACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAACTGCGAACTGTAGCGAGTTaGCCCACAGCGGCCGCGCTT +
Preference number: 4 (lower is better)
Translates to: HHGGMSAQTSNVVWGCKLRTVAS*PTAAAL
Trigger: AAGCGCGGCCGCTGTGGGCCAACTCGCTACAGTTCG...CAGTTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp GCCAGCATATCTCACCTCCAGCCACAGGGCGGTTTTCTCCTATCTCAGAATAGACGAACTGTAGCGAGTTaGCCCACAGCGGCCGCGCTT +
Preference number: 4 (lower is better)
Translates to: ASISHLQPQGGFLLSQNRRTVAS*PTAAAL
Trigger: AAGCGCGGCCGCTGTGGGCCAACTCGCTACAGTTCG...TCTATTCTGAGATAGGAGAAAACCGCCCTGTGGCTGGAGGTGAGATATGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTGTGGTTACCATTCAGTaGGCAGACAGACCACGGCAG +
Preference number: 4 (lower is better)
Translates to: PPGFRADSVLCLPLSVPAVVTIQ*ADRPRQ
Trigger: CTGCCGTGGTCTGTCTGCCCACTGAATGGTAACCAC...AGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCGTGGTTACCATTCAGTaGGCAGACAGACCACGGCAG +
Preference number: 4 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGVVTIQ*ADRPRQ
Trigger: CTGCCGTGGTCTGTCTGCCCACTGAATGGTAACCAC...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCATGGCTCATTGTAGCTaGCGAAGGCGATCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGMAHCS*RRRSGC
Trigger: GCAGCCTGATCGCCTTCGCCAGCTACAATGAGCCAT...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTATAGAGAAAGAACAGTaGGCCCAGGACCGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGIEKEQ*AQDRRS
Trigger: TGAGCGCCGGTCCTGGGCCCACTGTTCTTTCTCTAT...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTACTCCTGAGGCTACCTaGTATTCAAGGCTTACGCAC +
Preference number: 4 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVTPEAT*YSRLTH
Trigger: GTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGT...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCTCCAGGCCTTGGGGTTaGCCAGCTGCTCTATCTTGC +
Preference number: 4 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTSRPWG*PAALSC
Trigger: GCAAGATAGAGCAGCTGGCCAACCCCAAGGCCTGGA...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353278.8
CDS-3UTR TCA 90 bp CACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAACTGTGTCTGTCAGAGGGGTaGGGATGGCCGCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: HHGGMSAQTSNVVWGCKLCLSEG*GWPLCS
Trigger: GGAACACAGCGGCCATCCTCACCCCTCTGACAGACA...CAGTTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGACTTCAGGGTCCCCGTaGGGATGTAGTCGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKTSGSP*GCSRSG
Trigger: ACCTGAGCGACTACATCCTCACGGGGACCCTGAAGT...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCGTCTTTCCCTTCCCATaGGGCCATATCTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVVFPFP*GHISGC
Trigger: ACAGCCTGAGATATGGCCTCATGGGAAGGGAAAGAC...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTTGCTGTGTTTGCCATTaGGTGTGCCGGCTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGCCVCH*VCRLFK
Trigger: CTTGAAGAGCCGGCACACTCAATGGCAAACACAGCA...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp CCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTTGCTGTGTTTGCCATTaGGTGTGCCGGCTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: PPGFRADSVLCLPLSVPACCVCH*VCRLFK
Trigger: CTTGAAGAGCCGGCACACTCAATGGCAAACACAGCA...AGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp AGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTAAATGCTAAGGCTTACGCACCCTaGCTGATGACTGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: RSDGWPQGVVWASGVLNAKAYAP*LMTDPR
Trigger: CCTGGGATCAGTCATCAGTCAGGGTGCGTAAGCCTT...AGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp CACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAACTGTGCTTCCAGAAGGTCTaGTGGGTGGCCCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: HHGGMSAQTSNVVWGCKLCFQKV*WVAPGC
Trigger: ACACCCTGGGGCCACCCATCAGACCTTCTGGAAGCA...CAGTTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTACTCACAGTGGCTCCTaGCTCCTTTTCCAATGCACC +
Preference number: 4 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGTHSGS*LLFQCT
Trigger: GGTGCATTGGAAAAGGAGTCAGGAGCCACTGTGAGT...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456124.6
CDS-3UTR GCA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCCCACGGCGTACGAGATaGAGGCGAACACGAACTGTA +
Preference number: 4 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTPRRTR*RRTRTV
Trigger: TACAGTTCGTGTTCGCCTGCATCTCGTACGCCGTGG...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGACGGTGCCACGCAGGATaGACAGGTACACCACCAGCC +
Preference number: 4 (lower is better)
Translates to: AAFCCALCPWLIENGEWRRCHAG*TGTPPA
Trigger: GGCTGGTGGTGTACCTGTGCATCCTGCGTGGCACCG...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp CCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTTTGGGGTTGGCCAGCTaGTCTATCTTGGGAGTGAAC +
Preference number: 4 (lower is better)
Translates to: PPGFRADSVLCLPLSVPALGLAS*SILGVN
Trigger: GTTCACTCCCAAGATAGAGCAGCTGGCCAACCCCAA...AGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTTGGGGTTGGCCAGCTaGTCTATCTTGGGAGTGAAC +
Preference number: 4 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGLGLAS*SILGVN
Trigger: GTTCACTCCCAAGATAGAGCAGCTGGCCAACCCCAA...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp CTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCCTCACCTGCTCCAGGTTaGTGGCTGTCAAAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LVLDPPSETLEKGSLWGSSPAPG*WLSKSH
Trigger: ATGGCTTTTTGACAGCCAGCAACCTGGAGCAGGTGA...GGACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp AGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTAAATGCTTGTGTAGACGATGAATaGCAGGCCAGTGCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: RSDGWPQGVVWASGVLNACVDDE*QASALD
Trigger: GTCCAGGGCACTGGCCTGGCATTCATCGTCTACACA...AGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGCACCACGGGAGGGTGTaGGTTCTCCCAAGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKHHGRV*VLPREF
Trigger: AAACTCCCTTGGGAGAACGCACACCCTCCCGTGGTG...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGCACGGCAGGGGATCCTaGAAGGAGTGGAAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKHGRGS*KEWKRY
Trigger: GTACCTCTTCCACTCCTTCCAGGATCCCCTGCCGTG...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp AGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTAAATGCTGCTGACAATCAGCAGTaGGCTTACGCCAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: RSDGWPQGVVWASGVLNAADNQQ*AYASPH
Trigger: ATGTGGGCTGGCGTAAGCCCACTGCTGATTGTCAGC...AGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCTTTTGTAGAGAGGTCTaGTCCTGGACCCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVFCREV*SWTHRQ
Trigger: CTGACGGTGGGTCCAGGACCAGACCTCTCTACAAAA...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTGTCGCTCCAGCTTATTaGAGGGTGGGTGGACAAATG +
Preference number: 4 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGVAPAY*RVGGQM
Trigger: CATTTGTCCACCCACCCTCCAATAAGCTGGAGCGAC...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTCTGGCCATCGTGTCATaGCTACCACTAAGGGTACAG +
Preference number: 4 (lower is better)
Translates to: PPGFRADSVLCLPLSVPALAIVS*LPLRVQ
Trigger: CTGTACCCTTAGTGGTAGCCATGACACGATGGCCAG...AGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp CCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTCCAAGCTGCAGTTTTTaGTTTGCGGGAACATCTCGC +
Preference number: 4 (lower is better)
Translates to: PPGFRADSVLCLPLSVPAPSCSF*FAGTSR
Trigger: GCGAGATGTTCCCGCAAATCAAAAACTGCAGCTTGG...AGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp CACCACGGGAGGGTGTGCGTTCTCCCAAGGGAGTTTTCTTCCTGCACACCTTCCCTCTCCAGAATTCCATaGTCTCAAGGAAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: HHGRVCVLPREFSSCTPSLSRIP*SQGSTG
Trigger: TCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAG...GGAAGGTGTGCAGGAAGAAAACTCCCTTGGGAGAACGCACACCCTCCCGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp TGTAGCAGGGCAACAGGTGGGAAGAAGGTCAGCAGGGAAACATGTGAGCAAAGGGAAGATCTGGGTGGCTaGATTGATCCAGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: CSRATGGKKVSRETCEQREDLGG*IDPGLG
Trigger: CCCAAGGCCTGGATCAATGCAGCCACCCAGATCTTC...CCTTTGCTCACATGTTTCCCTGCTGACCTTCTTCCCACCTGTTGCCCTGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATCGAAGGCGATCAGGCTaGCGAAGCCCAGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDRRRSG*RSPGQV
Trigger: CACTTGGCCTGGGCTTCGGCAGCCTGATCGCCTTCG...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCTCACCTGCTCCAGGTTaGTGGCTGTCAAAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVSPAPG*WLSKSH
Trigger: ATGGCTTTTTGACAGCCAGCAACCTGGAGCAGGTGA...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTGCAGCTTTCTGCTGTaGATTGTGTCCCTGGTTAAT +
Preference number: 4 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVCSFLL*IVSLVN
Trigger: ATTAACCAGGGACACAATGCACAGCAGAAAGCTGCA...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCACCAGAAGTACTGTGTaGAGGACGCCTTCTCACACT +
Preference number: 4 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVTRSTV*RTPSHT
Trigger: AGTGTGAGAAGGCGTCCTCCACACAGTACTTCTGGT...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp AGGGGTAACGACCTACTCACAGTGGCTCCTGACTCCTTTTCCAATGCACCAAGAACACCCCCGTTCTCCTaGAGGGACGGCGAGATATTG +
Preference number: 4 (lower is better)
Translates to: RGNDLLTVAPDSFSNAPRTPPFS*RDGEIL
Trigger: CAATATCTCGCCGTCCCTCCAGGAGAACGGGGGTGT...TCTTGGTGCATTGGAAAAGGAGTCAGGAGCCACTGTGAGTAGGTCGTTACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456124.6
CDS-3UTR CCA 90 bp TGTAGCAGGGCAACAGGTGGGAAGAAGGTCAGCAGGGAAACATGTGAGCAAAGGATGGCTCATTGTAGCTaGCGAAGGCGATCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CSRATGGKKVSRETCEQRMAHCS*RRRSGC
Trigger: GCAGCCTGATCGCCTTCGCCAGCTACAATGAGCCAT...CCTTTGCTCACATGTTTCCCTGCTGACCTTCTTCCCACCTGTTGCCCTGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCATGATGGCGTGCTTCTaGCAGTTGTTGGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGMMACF*QLLDGS
Trigger: TGAGCCATCCAACAACTGCCAGAAGCACGCCATCAT...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCCCTGCTCCAGGTTGCTaGCTGTCAAAAAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGPAPGC*LSKSHL
Trigger: AAGATGGCTTTTTGACAGCCAGCAACCTGGAGCAGG...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGAAGGCCGGGTAATCTTTaGTCACGAGCTGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AAFCCALCPWLIENGEWRRPGNL*SRAGPG
Trigger: CCCAGGGCCAGCTCGTGACCAAAGATTACCCGGCCT...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CCTTCCTCTTATCTCAACTGCAAAGAGGCCTCCCTCCTTCACTATTCCTCCTCACCAGGGGGATGCACATaGTGGAGGAGGCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: PSSYLNCKEASLLHYSSSPGGCT*WRRPQA
Trigger: TGCTTGTGGCCTCCTCCACCATGTGCATCCCCCTGG...TGAGGAGGAATAGTGAAGGAGGGAGGCCTCTTTGCAGTTGAGATAAGAGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp AGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTAAATGCTTTTTGTAGAGAGGTCTaGTCCTGGACCCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: RSDGWPQGVVWASGVLNAFCREV*SWTHRQ
Trigger: CTGACGGTGGGTCCAGGACCAGACCTCTCTACAAAA...AGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTAGCAGCCAGAGTAGCTaGAATTACAGGCCTATGCCA +
Preference number: 4 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGSSQSS*NYRPMP
Trigger: TGGCATAGGCCTGTAATTCCAGCTACTCTGGCTGCT...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGTCGCCCAGACTGGAGTaGAGTGGCATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKSPRLE*SGMILA
Trigger: AGCCAAGATCATGCCACTCCACTCCAGTCTGGGCGA...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGATAGAGAAAGAACAGTaGGCCCAGGACCGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKIEKEQ*AQDRRS
Trigger: TGAGCGCCGGTCCTGGGCCCACTGTTCTTTCTCTAT...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCACTCCTGAGGCTACCTaGTATTCAAGGCTTACGCAC +
Preference number: 4 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVTPEAT*YSRLTH
Trigger: GTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGT...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCCCCCAGGGTGTGGTGTaGGCATCTGGAGTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGPQGVV*ASGVLN
Trigger: ATTTAAAACTCCAGATGCCCACACCACACCCTGGGG...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTTATTGGAGGGTGGGTaGACAAATGTCGACATGGCC +
Preference number: 4 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGLLEGG*TNVDMA
Trigger: GGCCATGTCGACATTTGTCCACCCACCCTCCAATAA...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR CAA 72 bp GATCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTaGCCATTGAGTGTGCCGGCTCTTCAAGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: DPPGFRADSVLC*PLSVPALQALT
Trigger: TGTCAAGGCTTGAAGAGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGGGGACGGCGAGATATTaGGGGTTTTCCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKGTARY*GFSCTR
Trigger: TCTGGTACAGGAAAACCCTCAATATCTCGCCGTCCC...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTTGGCCGCGTAGTCGTTaGATATGTCAAACCAGTAGT +
Preference number: 4 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGWPRSR*ICQTSS
Trigger: ACTACTGGTTTGACATATTCAACGACTACGCGGCCA...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGACTGCGTCTCCCCTCTTaGGGCGACGCTGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: AAFCCALCPWLIENGEWRLRLPS*GDAEQK
Trigger: CTTTTGTTCAGCGTCGCCTCAAGAGGGGAGACGCAG...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp ACACACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAACTGCGTCTCCCCTCTTaGGGCGACGCTGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: THHGGMSAQTSNVVWGCKLRLPS*GDAEQK
Trigger: CTTTTGTTCAGCGTCGCCTCAAGAGGGGAGACGCAG...TTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCCCTGGCTTAAGCATTTaGAAAAGCAGCCGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVPGLSI*KSSRGV
Trigger: AACTCCTCGGCTGCTTTTTCAAATGCTTAAGCCAGG...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTCCTGGCTTAAGCATTTaGAAAAGCAGCCGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGPGLSI*KSSRGV
Trigger: AACTCCTCGGCTGCTTTTTCAAATGCTTAAGCCAGG...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGGGCCAACGTCCCAGGTaGGTGTTTGTGTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKGQRPR*VFVSSK
Trigger: CTTTGAAGACACAAACACTCACCTGGGACGTTGGCC...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATTGCTTCCAGAAGGTCTaGTGGGTGGCCCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDCFQKV*WVAPGC
Trigger: ACACCCTGGGGCCACCCATCAGACCTTCTGGAAGCA...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTATCCAGGCGCCGATGCTaGCCTGCCGCATGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVSRRRC*PAACAA
Trigger: GGCAGCGCATGCGGCAGGGCAGCATCGGCGCCTGGA...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGAGCGCCGGCTCCCACTaGACACCCCCGTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVSAGSH*TPPFSW
Trigger: CCAGGAGAACGGGGGTGTGCAGTGGGAGCCGGCGCT...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGAGCTTGGGTAGGCAGATaGGAGGTAGCCCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: AAFCCALCPWLIENGEWRAWVGR*EVALHL
Trigger: CAGGTGAAGGGCTACCTCGCATCTGCCTACCCAAGC...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp CCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTACATCTCGCTGTATTTaGTTGGGTAGGCAGATGCGA +
Preference number: 4 (lower is better)
Translates to: PPGFRADSVLCLPLSVPATSRCI*LGRQMR
Trigger: TCGCATCTGCCTACCCAAGCAAATACAGCGAGATGT...AGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTACATCTCGCTGTATTTaGTTGGGTAGGCAGATGCGA +
Preference number: 4 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGTSRCI*LGRQMR
Trigger: TCGCATCTGCCTACCCAAGCAAATACAGCGAGATGT...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGCCCGATGACAGCCAGTaGATAGGCCGGGTAATCTTT +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKPDDSQ*IGRVIF
Trigger: AAAGATTACCCGGCCTATGCACTGGCTGTCATCGGG...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTATCTGGAGTTTTAAATaGTCCCAGGTGGTTGGAATG +
Preference number: 4 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVIWSFK*SQVVGM
Trigger: CATTCCAACCACCTGGGAGCATTTAAAACTCCAGAT...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGACACGGCAGGGGATCCTaGAAGGAGTGGAAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: AAFCCALCPWLIENGEWRHGRGS*KEWKRY
Trigger: GTACCTCTTCCACTCCTTCCAGGATCCCCTGCCGTG...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CCTTCCTCTTATCTCAACTGCAAAGAGGCCTCCCTCCTTCACTATTCCTCCTCACACGGCAGGGGATCCTaGAAGGAGTGGAAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: PSSYLNCKEASLLHYSSSHGRGS*KEWKRY
Trigger: GTACCTCTTCCACTCCTTCCAGGATCCCCTGCCGTG...TGAGGAGGAATAGTGAAGGAGGGAGGCCTCTTTGCAGTTGAGATAAGAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGATCCAGGCCTTGGGGTTaGCCAGCTGCTCTATCTTGG +
Preference number: 4 (lower is better)
Translates to: AAFCCALCPWLIENGEWRSRPWG*PAALSW
Trigger: CCAAGATAGAGCAGCTGGCCAACCCCAAGGCCTGGA...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358525.9
CDS-3UTR CCA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCGCTTCTGGCAGTTGTTaGATGGCTCATTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTASGSC*MAHCSW
Trigger: CCAGCTACAATGAGCCATCCAACAACTGCCAGAAGC...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp AGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTAAATGCTATGATGGCGTGCTTCTaGCAGTTGTTGGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: RSDGWPQGVVWASGVLNAMMACF*QLLDGS
Trigger: TGAGCCATCCAACAACTGCCAGAAGCACGCCATCAT...AGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp AGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTAAATGCTCTCGCTGTATTTGCTTaGGTAGGCAGATGCGAGGTA +
Preference number: 4 (lower is better)
Translates to: RSDGWPQGVVWASGVLNALAVFA*VGRCEV
Trigger: TACCTCGCATCTGCCTACCCAAGCAAATACAGCGAG...AGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGGCCAGGCCAGTGCCCTaGACGGCCGTGTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVARPVP*TAVSSS
Trigger: GGAGCTAGACACGGCCGTCCAGGGCACTGGCCTGGC...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCAGCACCGACCACAGCTaGGACACCTCCATGTTTTTA +
Preference number: 4 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTSTDHS*DTSMFL
Trigger: TAAAAACATGGAGGTGTCCCAGCTGTGGTCGGTGCT...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp CACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAACTGGCTGACAATCAGCAGTaGGCTTACGCCAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: HHGGMSAQTSNVVWGCKLADNQQ*AYASPH
Trigger: ATGTGGGCTGGCGTAAGCCCACTGCTGATTGTCAGC...CAGTTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp CTCCTCAGCACCGACCCTTTACAGGTGTCGGGCTGGGGGACAGTCAGGTCTTTCCACAGACTTCTAATGTaGTTTGGGGTTGCAAACTGT +
Preference number: 4 (lower is better)
Translates to: LLSTDPLQVSGWGTVRSFHRLLM*FGVANC
Trigger: ACAGTTTGCAACCCCAAACCACATTAGAAGTCTGTG...GAAAGACCTGACTGTCCCCCAGCCCGACACCTGTAAAGGGTCGGTGCTGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTCACAGACTTCTAATGTaGTTTGGGGTTGCAAACTGT +
Preference number: 4 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVHRLLM*FGVANC
Trigger: ACAGTTTGCAACCCCAAACCACATTAGAAGTCTGTG...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCACTCCTGAGGCTACCTaGTATTCAAGGCTTACGCAC +
Preference number: 4 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTTPEAT*YSRLTH
Trigger: GTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGT...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATGGTGGCCCCAGGGTGTaGTGTGGGCATCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDGGPRV*CGHLEF
Trigger: AAACTCCAGATGCCCACACCACACCCTGGGGCCACC...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp GCCAGCATATCTCACCTCCAGCCACAGGGCGGTTTTCTCCTATCTCAGAATAGAGAGTTTTTGGGGCCATaGAGGCCCAGGTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: ASISHLQPQGGFLLSQNREFLGP*RPRSCF
Trigger: GAAGCAAGACCTGGGCCTCCATGGCCCCAAAAACTC...TCTATTCTGAGATAGGAGAAAACCGCCCTGTGGCTGGAGGTGAGATATGCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCCGGACAAATGTCGACATaGCCACTTTTGTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: LVLDPPSETLEKGSLWGSGQMST*PLLCSI
Trigger: GATACTGCACAAAAGTGGCCATGTCGACATTTGTCC...GGACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGCTGGCCATCGTGTCATaGCTACCACTAAGGGTACAG +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKLAIVS*LPLRVQ
Trigger: CTGTACCCTTAGTGGTAGCCATGACACGATGGCCAG...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
3UTR CAA 72 bp TACAGGGATGGAATGTCCCTTTGTCGCTCCAGCTTATaGGAGGGTGGGTGGACAAATGTCGACATGGCCACT +
Preference number: 4 (lower is better)
Translates to: YRDGMSLCRSSL*EGGWTNVDMAT
Trigger: AGTGGCCATGTCGACATTTGTCCACCCACCCTCCAATAAGCTGGAGCGACAAAGGGACATTCCATCCCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGATGGAGTGGAGTGGCATaGTCTTGGCTCACAGCAACC +
Preference number: 4 (lower is better)
Translates to: AAFCCALCPWLIENGEWRWSGVA*SWLTAT
Trigger: GGTTGCTGTGAGCCAAGATCATGCCACTCCACTCCA...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp ACACACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAAAAGGCTTACGCACCCTaGCTGATGACTGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: THHGGMSAQTSNVVWGCKKAYAP*LMTDPR
Trigger: CCTGGGATCAGTCATCAGTCAGGGTGCGTAAGCCTT...TTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACTCCTCCAGGCGCCGATaGTGCCCTGCCGCATGCGCT +
Preference number: 4 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDSSRRR*CPAACA
Trigger: AGCGCATGCGGCAGGGCAGCATCGGCGCCTGGAGGA...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTATCCTCCAGGCGCCGATaGTGCCCTGCCGCATGCGCT +
Preference number: 4 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVSSRRR*CPAACA
Trigger: AGCGCATGCGGCAGGGCAGCATCGGCGCCTGGAGGA...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGGACACGATGATGGCGTaGTTCTGGCAGTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKDTMMA*FWQLLD
Trigger: ATCCAACAACTGCCAGAAGCACGCCATCATCGTGTC...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGACTGTGTTCCCCAGCATaGTCCCAATGCCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: AAFCCALCPWLIENGEWRLCSPA*SQCPAS
Trigger: TGATGCTGGGCATTGGGAGCATGCTGGGGAACACAG...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp CTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCCATCTGGAGTTTTAAATaGTCCCAGGTGGTTGGAATG +
Preference number: 4 (lower is better)
Translates to: LVLDPPSETLEKGSLWGSIWSFK*SQVVGM
Trigger: CATTCCAACCACCTGGGAGCATTTAAAACTCCAGAT...GGACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGGCTTCTGGCAGTTGTTaGATGGCTCATTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKASGSC*MAHCSW
Trigger: CCAGCTACAATGAGCCATCCAACAACTGCCAGAAGC...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATGCCTCCTTGGGCAGGTaGCTGGAGATGATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDASLGR*LEMILL
Trigger: CAGCAAGATCATCTCCAGCCACCTGCCCAAGGAGGC...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp ACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTTAGAGCAGACACCAGACCTGAGATaGCCTCCTTGGGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TETLQNSMISRKHWTLEQTPDLR*PPWAGG
Trigger: GCCACCTGCCCAAGGAGGCCATCTCAGGTCTGGTGT...CTGCTCTAACGTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp CCTTCCTCTTATCTCAACTGCAAAGAGGCCTCCCTCCTTCACTATTCCTCCTCAATACCCAGGCTTTCTTaGGCAGAGGTCCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PSSYLNCKEASLLHYSSSIPRLS*AEVPAA
Trigger: AGCTGCAGGGACCTCTGCCCAAGAAAGCCTGGGTAT...TGAGGAGGAATAGTGAAGGAGGGAGGCCTCTTTGCAGTTGAGATAAGAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGATCTCAAGGAAGCACTaGACGTTAGAGCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKISRKH*TLEQEG
Trigger: CCCTTCCTGCTCTAACGTCCAGTGCTTCCTTGAGAT...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATCACCTAGGGAGTTTTTaGGGCCATGGAGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDHLGSF*GHGGPG
Trigger: ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTG...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp CACCACGGGAGGGTGTGCGTTCTCCCAAGGGAGTTTTCTTCCTGCACACCTTCCGACAGGATTGATTACTaGCTCAAGAGGATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: HHGRVCVLPREFSSCTPSDRIDY*LKRILE
Trigger: CTCAAGAATCCTCTTGAGCCAGTAATCAATCCTGTC...GGAAGGTGTGCAGGAAGAAAACTCCCTTGGGAGAACGCACACCCTCCCGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp AGGGGTAACGACCTACTCACAGTGGCTCCTGACTCCTTTTCCAATGCACCAAGACCAAGCTGCAGTTTTTaGTTTGCGGGAACATCTCGC +
Preference number: 4 (lower is better)
Translates to: RGNDLLTVAPDSFSNAPRPSCSF*FAGTSR
Trigger: GCGAGATGTTCCCGCAAATCAAAAACTGCAGCTTGG...TCTTGGTGCATTGGAAAAGGAGTCAGGAGCCACTGTGAGTAGGTCGTTACCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456124.6
CDS-3UTR TCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATTGCCAATGGCACAGTTaGCAAGGCACACCAGACCTG +
Preference number: 4 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDCQWHS*QGTPDL
Trigger: CAGGTCTGGTGTGCCTTGTCAACTGTGCCATTGGCA...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGCCACAAGCAGCCCGATaGCAGCCAGTGCATAGGCCG +
Preference number: 4 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVPQAAR*QPVHRP
Trigger: CGGCCTATGCACTGGCTGTCATCGGGCTGCTTGTGG...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGAGGCCAACGTCCCAGGTaGGTGTTTGTGTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: AAFCCALCPWLIENGEWRGQRPR*VFVSSK
Trigger: CTTTGAAGACACAAACACTCACCTGGGACGTTGGCC...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCTTATCTTTTCACTCCTaGGGCTACCTGGTATTCAAG +
Preference number: 4 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVLSFHS*GYLVFK
Trigger: CTTGAATACCAGGTAGCCTCAGGAGTGAAAAGATAA...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp CACAGACACAGTAACAATCTGATCTTTCTTTTCCCCACATGGACTAATGCGATATGCTGCCCTGCCGCATaGGCTGCCCCACAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: HRHSNNLIFLFPTWTNAICCPAA*AAPQPV
Trigger: AACTGGCTGTGGGGCAGCGCATGCGGCAGGGCAGCA...TATCGCATTAGTCCATGTGGGGAAAAGAAAGATCAGATTGTTACTGTGTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAACGGTGCCACGCAGGATaGACAGGTACACCACCAGCC +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKRCHAG*TGTPPA
Trigger: GGCTGGTGGTGTACCTGTGCATCCTGCGTGGCACCG...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp CACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAACTGTCACCTGCTCCAGGTTaGTGGCTGTCAAAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: HHGGMSAQTSNVVWGCKLSPAPG*WLSKSH
Trigger: ATGGCTTTTTGACAGCCAGCAACCTGGAGCAGGTGA...CAGTTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp CCTTCCTCTTATCTCAACTGCAAAGAGGCCTCCCTCCTTCACTATTCCTCCTCACAAGGAAAGGTACTGTaGCCAGATGTGCACGTAGGC +
Preference number: 4 (lower is better)
Translates to: PSSYLNCKEASLLHYSSSQGKVL*PDVHVG
Trigger: GCCTACGTGCACATCTGGGCACAGTACCTTTCCTTG...TGAGGAGGAATAGTGAAGGAGGGAGGCCTCTTTGCAGTTGAGATAAGAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCATCTGGAGTTTTAAATaGTCCCAGGTGGTTGGAATG +
Preference number: 4 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGIWSFK*SQVVGM
Trigger: CATTCCAACCACCTGGGAGCATTTAAAACTCCAGAT...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp GCCAGCATATCTCACCTCCAGCCACAGGGCGGTTTTCTCCTATCTCAGAATAGAATGATGGCGTGCTTCTaGCAGTTGTTGGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: ASISHLQPQGGFLLSQNRMMACF*QLLDGS
Trigger: TGAGCCATCCAACAACTGCCAGAAGCACGCCATCAT...TCTATTCTGAGATAGGAGAAAACCGCCCTGTGGCTGGAGGTGAGATATGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCTACTCACAGTGGCAAGGTCAAAAGTGTTaGTCAGCAGCAGACTCACCT +
Preference number: 4 (lower is better)
Translates to: VRAGRDSLTLGVTTYSQWQGQKC*SAADSP
Trigger: AGGTGAGTCTGCTGCTGACCAACACTTTTGACCTTG...CCACTGTGAGTAGGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456124.6
CDS-3UTR CCA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGTCTTTGGTCACGAGCTaGCCCTGGGAGGCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVSLVTS*PWEASQ
Trigger: CTGGGACGCCTCCCAGGGCCAGCTCGTGACCAAAGA...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp ACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTTAGAGCAGGGGGTTTCGCCATGTTaGCCAGGCTGGCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: TETLQNSMISRKHWTLEQGVSPC*PGWPQT
Trigger: AGTTTGAGGCCAGCCTGGCCAACATGGCGAAACCCC...CTGCTCTAACGTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATTCGCCCAGACTGGAGTaGAGTGGCATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDSPRLE*SGMILA
Trigger: AGCCAAGATCATGCCACTCCACTCCAGTCTGGGCGA...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGACCCGCACCGGCGCTaGCCTCTGAGTTCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDDPHRR*PLSSLS
Trigger: ACTGAGGGAACTCAGAGGCCAGCGCCGGTGCGGGTC...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAACTGATCTCAAGGAAGCACTaGACGTTAGAGCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: HHGGMSAQTSNVVWGCKLISRKH*TLEQEG
Trigger: CCCTTCCTGCTCTAACGTCCAGTGCTTCCTTGAGAT...CAGTTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp GTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCTACTCACAGTGGTGTGGTGTGGGCATCTaGAGTTTTAAATGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VRAGRDSLTLGVTTYSQWCGVGI*SFKCSQ
Trigger: CTGGGAGCATTTAAAACTCCAGATGCCCACACCACA...CCACTGTGAGTAGGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456124.6
CDS-3UTR TCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAATCTGGGTGGCTGCATTaGTCCAGGCCTTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKSGWLH*SRPWGW
Trigger: CCAACCCCAAGGCCTGGATCAATGCAGCCACCCAGA...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAATGTCTGTCAGAGGGGTaGGGATGGCCGCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKCLSEG*GWPLCS
Trigger: GGAACACAGCGGCCATCCTCACCCCTCTGACAGACA...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGCTCTTGAGGCGACGCTaGACAAAAGTCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVLLRRR*TKVPRA
Trigger: GGCCCTGGGGACTTTTGTTCAGCGTCGCCTCAAGAG...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp GCCAGCATATCTCACCTCCAGCCACAGGGCGGTTTTCTCCTATCTCAGAATAGACTCTCCAGAATTCCATaGTCTCAAGGAAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: ASISHLQPQGGFLLSQNRLSRIP*SQGSTG
Trigger: TCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAG...TCTATTCTGAGATAGGAGAAAACCGCCCTGTGGCTGGAGGTGAGATATGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp ACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTTAGAGCAGAAGGCTTACGCACCCTaGCTGATGACTGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: TETLQNSMISRKHWTLEQKAYAP*LMTDPR
Trigger: CCTGGGATCAGTCATCAGTCAGGGTGCGTAAGCCTT...CTGCTCTAACGTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAATGCCAGTGGACTCGGTaGCACGCAGGATGCACAGGT +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKCQWTR*HAGCTG
Trigger: ACCTGTGCATCCTGCGTGGCACCGAGTCCACTGGCA...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTACGAAGGCGATCAGGCTaGCGAAGCCCAGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVRRRSG*RSPGQV
Trigger: CACTTGGCCTGGGCTTCGGCAGCCTGATCGCCTTCG...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCCTGCAGTTTTTGATTTaGGGGAACATCTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTLQFLI*GNISLY
Trigger: ATACAGCGAGATGTTCCCGCAAATCAAAAACTGCAG...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp GCCAGCATATCTCACCTCCAGCCACAGGGCGGTTTTCTCCTATCTCAGAATAGAACAGAGCAGTATTGCTaGCAGCATATCTCACCTCCA +
Preference number: 4 (lower is better)
Translates to: ASISHLQPQGGFLLSQNRTEQYC*QHISPP
Trigger: TGGAGGTGAGATATGCTGGCAGCAATACTGCTCTGT...TCTATTCTGAGATAGGAGAAAACCGCCCTGTGGCTGGAGGTGAGATATGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGCCCAGGTGGTTGGAATaGGCTGCAAGGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVPRWLE*AARWGH
Trigger: GTGTCCCCACCTTGCAGCGCATTCCAACCACCTGGG...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CACTTTAGGGGTAACGACCTACTCACAGTGGCTCCTGACTCCTTTTCCAATGCAAGCACCGACCACAGCTaGGACACCTCCATGTTTTTA +
Preference number: 4 (lower is better)
Translates to: HFRGNDLLTVAPDSFSNASTDHS*DTSMFL
Trigger: TAAAAACATGGAGGTGTCCCAGCTGTGGTCGGTGCT...TGCATTGGAAAAGGAGTCAGGAGCCACTGTGAGTAGGTCGTTACCCCTAAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456124.6
CDS-3UTR CCA 90 bp TGTAGCAGGGCAACAGGTGGGAAGAAGGTCAGCAGGGAAACATGTGAGCAAAGGTGGGCTGAGCACTCCTaGCTTAAGCATTTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: CSRATGGKKVSRETCEQRWAEHS*LKHLKK
Trigger: CTTTTTCAAATGCTTAAGCCAGGAGTGCTCAGCCCA...CCTTTGCTCACATGTTTCCCTGCTGACCTTCTTCCCACCTGTTGCCCTGCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCCCTAAGATTTAAAGGGTaGAAGGGGAACACAGAAATT +
Preference number: 4 (lower is better)
Translates to: LVLDPPSETLEKGSLWGSLRFKG*KGNTEI
Trigger: AATTTCTGTGTTCCCCTTCCACCCTTTAAATCTTAG...GGACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp ACACACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAAGAGAAAGGATCCCTTTaGGGGTCCCAGACAAAGATC +
Preference number: 4 (lower is better)
Translates to: THHGGMSAQTSNVVWGCKEKGSL*GSQTKI
Trigger: GATCTTTGTCTGGGACCCCCAAAGGGATCCTTTCTC...TTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGAAGCAGCCAGAGTAGCTaGAATTACAGGCCTATGCCA +
Preference number: 4 (lower is better)
Translates to: AAFCCALCPWLIENGEWRSSQSS*NYRPMP
Trigger: TGGCATAGGCCTGTAATTCCAGCTACTCTGGCTGCT...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CACCACGGGAGGGTGTGCGTTCTCCCAAGGGAGTTTTCTTCCTGCACACCTTCCGTAATATTAAGCCTATaGGAAAGTCAGAGCCACTTT +
Preference number: 4 (lower is better)
Translates to: HHGRVCVLPREFSSCTPSVILSL*ESQSHF
Trigger: AAAGTGGCTCTGACTTTCCCATAGGCTTAATATTAC...GGAAGGTGTGCAGGAAGAAAACTCCCTTGGGAGAACGCACACCCTCCCGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp ACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTTAGAGCAGATACCCAGGCTTTCTTaGGCAGAGGTCCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TETLQNSMISRKHWTLEQIPRLS*AEVPAA
Trigger: AGCTGCAGGGACCTCTGCCCAAGAAAGCCTGGGTAT...CTGCTCTAACGTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GCCAGCATATCTCACCTCCAGCCACAGGGCGGTTTTCTCCTATCTCAGAATAGATGTGGTGTGGGCATCTaGAGTTTTAAATGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ASISHLQPQGGFLLSQNRCGVGI*SFKCSQ
Trigger: CTGGGAGCATTTAAAACTCCAGATGCCCACACCACA...TCTATTCTGAGATAGGAGAAAACCGCCCTGTGGCTGGAGGTGAGATATGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGGGTGGCCCCAGGGTGTaGTGTGGGCATCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVGGPRV*CGHLEF
Trigger: AAACTCCAGATGCCCACACCACACCCTGGGGCCACC...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCGACAGGATTGATTACTaGCTCAAGAGGATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTDRIDY*LKRILE
Trigger: CTCAAGAATCCTCTTGAGCCAGTAATCAATCCTGTC...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CCTTCCTCTTATCTCAACTGCAAAGAGGCCTCCCTCCTTCACTATTCCTCCTCATTATTGGAGGGTGGGTaGACAAATGTCGACATGGCC +
Preference number: 4 (lower is better)
Translates to: PSSYLNCKEASLLHYSSSLLEGG*TNVDMA
Trigger: GGCCATGTCGACATTTGTCCACCCACCCTCCAATAA...TGAGGAGGAATAGTGAAGGAGGGAGGCCTCTTTGCAGTTGAGATAAGAGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGAGGGCAGTGACGCCGTaGAATACACCACCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVRAVTP*NTPPCQ
Trigger: CTGGCAAGGTGGTGTATTTCACGGCGTCACTGCCCT...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358525.9
CDS-3UTR TCA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACAAGGCACACCAGACCTaGGATGGCCTCCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDKAHQT*DGLLGQ
Trigger: CTGCCCAAGGAGGCCATCTCAGGTCTGGTGTGCCTT...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATCCTCCTAGGTTCAAATaGTTCTTGTGCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDPPRFK*FLCLSS
Trigger: GCTGCTGAGGCACAAGAATCATTTGAACCTAGGAGG...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATGACACGATGATGGCGTaGTTCTGGCAGTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDDTMMA*FWQLLD
Trigger: ATCCAACAACTGCCAGAAGCACGCCATCATCGTGTC...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAAGCTTGGGTAGGCAGATaGGAGGTAGCCCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKAWVGR*EVALHL
Trigger: CAGGTGAAGGGCTACCTCGCATCTGCCTACCCAAGC...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGAACATCTCGCTGTATTTaGTTGGGTAGGCAGATGCGA +
Preference number: 4 (lower is better)
Translates to: AAFCCALCPWLIENGEWRTSRCI*LGRQMR
Trigger: TCGCATCTGCCTACCCAAGCAAATACAGCGAGATGT...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp GCCAGCATATCTCACCTCCAGCCACAGGGCGGTTTTCTCCTATCTCAGAATAGATGCAGCTTTCTGCTGTaGATTGTGTCCCTGGTTAAT +
Preference number: 4 (lower is better)
Translates to: ASISHLQPQGGFLLSQNRCSFLL*IVSLVN
Trigger: ATTAACCAGGGACACAATGCACAGCAGAAAGCTGCA...TCTATTCTGAGATAGGAGAAAACCGCCCTGTGGCTGGAGGTGAGATATGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATACCAGAAGTACTGTGTaGAGGACGCCTTCTCACACT +
Preference number: 4 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDTRSTV*RTPSHT
Trigger: AGTGTGAGAAGGCGTCCTCCACACAGTACTTCTGGT...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAAACACCCCCGTTCTCCTaGAGGGACGGCGAGATATTG +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKTPPFS*RDGEIL
Trigger: CAATATCTCGCCGTCCCTCCAGGAGAACGGGGGTGT...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATCCTGCTCCAGGTTGCTaGCTGTCAAAAAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDPAPGC*LSKSHL
Trigger: AAGATGGCTTTTTGACAGCCAGCAACCTGGAGCAGG...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATCTCGCTGTATTTGCTTaGGTAGGCAGATGCGAGGTA +
Preference number: 4 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDLAVFA*VGRCEV
Trigger: TACCTCGCATCTGCCTACCCAAGCAAATACAGCGAG...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTACCAGGGGGATGCACATaGTGGAGGAGGCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVPGGCT*WRRPQA
Trigger: TGCTTGTGGCCTCCTCCACCATGTGCATCCCCCTGG...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAAAAAACCGTGAGCGGCTaGGAAGCCCACATCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKKTVSG*EAHISG
Trigger: GCCTGAGATGTGGGCTTCCCAGCCGCTCACGGTTTT...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GCCAGCATATCTCACCTCCAGCCACAGGGCGGTTTTCTCCTATCTCAGAATAGATGGGCTGAGCACTCCTaGCTTAAGCATTTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: ASISHLQPQGGFLLSQNRWAEHS*LKHLKK
Trigger: CTTTTTCAAATGCTTAAGCCAGGAGTGCTCAGCCCA...TCTATTCTGAGATAGGAGAAAACCGCCCTGTGGCTGGAGGTGAGATATGCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGCCATGGGGTACATGCTaGTTCATACATTTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKPWGTC*FIHLKV
Trigger: GACTTTCAAATGTATGAACCAGCATGTACCCCATGG...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGATGTGGTGTGGGCATCTaGAGTTTTAAATGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: AAFCCALCPWLIENGEWRCGVGI*SFKCSQ
Trigger: CTGGGAGCATTTAAAACTCCAGATGCCCACACCACA...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAACACCTAGGGAGTTTTTaGGGCCATGGAGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKHLGSF*GHGGPG
Trigger: ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTG...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGACAGCTTATTGGAGGGTaGGTGGACAAATGTCGACAT +
Preference number: 4 (lower is better)
Translates to: AAFCCALCPWLIENGEWRQLIGG*VDKCRH
Trigger: ATGTCGACATTTGTCCACCCACCCTCCAATAAGCTG...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGCCAGCATCAGCAGCATaGAGAAGTAGAGCACCGACC +
Preference number: 4 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVPASAA*RSRAPT
Trigger: GGTCGGTGCTCTACTTCTTCATGCTGCTGATGCTGG...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGTGCCAATGGCACAGTTaGCAAGGCACACCAGACCTG +
Preference number: 4 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVCQWHS*QGTPDL
Trigger: CAGGTCTGGTGTGCCTTGTCAACTGTGCCATTGGCA...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp CACAGACACAGTAACAATCTGATCTTTCTTTTCCCCACATGGACTAATGCGATAACTTCAGGGTCCCCGTaGGGATGTAGTCGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: HRHSNNLIFLFPTWTNAITSGSP*GCSRSG
Trigger: ACCTGAGCGACTACATCCTCACGGGGACCCTGAAGT...TATCGCATTAGTCCATGTGGGGAAAAGAAAGATCAGATTGTTACTGTGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGGTATCTGTAAAACCGTaGGCGGCTGGGAAGCCCACA +
Preference number: 4 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVVSVKP*AAGKPT
Trigger: TGTGGGCTTCCCAGCCGCTCACGGTTTTACAGATAC...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGTGGAGTGGAGTGGCATaGTCTTGGCTCACAGCAACC +
Preference number: 4 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVWSGVA*SWLTAT
Trigger: GGTTGCTGTGAGCCAAGATCATGCCACTCCACTCCA...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATCTCTCCAGAATTCCATaGTCTCAAGGAAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDLSRIP*SQGSTG
Trigger: TCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAG...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp CACAGACACAGTAACAATCTGATCTTTCTTTTCCCCACATGGACTAATGCGATAACCCTGACTGATGACTaGTCCCAGGTGGCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: HRHSNNLIFLFPTWTNAITLTDD*SQVALS
Trigger: ACTCAGGGCCACCTGGGATCAGTCATCAGTCAGGGT...TATCGCATTAGTCCATGTGGGGAAAAGAAAGATCAGATTGTTACTGTGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTGCCAGTGGACTCGGTaGCACGCAGGATGCACAGGT +
Preference number: 4 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFCQWTR*HAGCTG
Trigger: ACCTGTGCATCCTGCGTGGCACCGAGTCCACTGGCA...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAAGAAGATCTGGGTGGCTaGATTGATCCAGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKEDLGG*IDPGLG
Trigger: CCCAAGGCCTGGATCAATGCAGCCACCCAGATCTTC...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAACTGTGTTCCCCAGCATaGTCCCAATGCCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKLCSPA*SQCPAS
Trigger: TGATGCTGGGCATTGGGAGCATGCTGGGGAACACAG...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGGTCCCTGCAGCTTTCTaGTGTGCATTGTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVVPAAF*CALCPW
Trigger: CCAGGGACACAATGCACAGCAGAAAGCTGCAGGGAC...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTCCCAGGTGGTTGGAATaGGCTGCAAGGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFPRWLE*AARWGH
Trigger: GTGTCCCCACCTTGCAGCGCATTCCAACCACCTGGG...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAAATGGCTCATTGTAGCTaGCGAAGGCGATCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKMAHCS*RRRSGC
Trigger: GCAGCCTGATCGCCTTCGCCAGCTACAATGAGCCAT...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATCAAGGTCAAAAGTGTTaGTCAGCAGCAGACTCACCT +
Preference number: 4 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDQGQKC*SAADSP
Trigger: AGGTGAGTCTGCTGCTGACCAACACTTTTGACCTTG...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp ACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTTAGAGCAGCCTGCTCCAGGTTGCTaGCTGTCAAAAAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: TETLQNSMISRKHWTLEQPAPGC*LSKSHL
Trigger: AAGATGGCTTTTTGACAGCCAGCAACCTGGAGCAGG...CTGCTCTAACGTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp CACAGACACAGTAACAATCTGATCTTTCTTTTCCCCACATGGACTAATGCGATAGCCTCCTTGGGCAGGTaGCTGGAGATGATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HRHSNNLIFLFPTWTNAIASLGR*LEMILL
Trigger: CAGCAAGATCATCTCCAGCCACCTGCCCAAGGAGGC...TATCGCATTAGTCCATGTGGGGAAAAGAAAGATCAGATTGTTACTGTGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACAAAACCGTGAGCGGCTaGGAAGCCCACATCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDKTVSG*EAHISG
Trigger: GCCTGAGATGTGGGCTTCCCAGCCGCTCACGGTTTT...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp TGTAGCAGGGCAACAGGTGGGAAGAAGGTCAGCAGGGAAACATGTGAGCAAAGGATTCTAGGGCTTTCCTaGAATGAAGGATGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: CSRATGGKKVSRETCEQRILGLS*NEGCSY
Trigger: ATAACTGCATCCTTCATTCCAGGAAAGCCCTAGAAT...CCTTTGCTCACATGTTTCCCTGCTGACCTTCTTCCCACCTGTTGCCCTGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTTGTCCTCTAATATTTTaGTGTCTCTTCAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGCPLIF*CLFSQK
Trigger: TTTTTGGCTGAAGAGACACCAAAATATTAGAGGACA...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CACAGACACAGTAACAATCTGATCTTTCTTTTCCCCACATGGACTAATGCGATAGGGGTTTCGCCATGTTaGCCAGGCTGGCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: HRHSNNLIFLFPTWTNAIGVSPC*PGWPQT
Trigger: AGTTTGAGGCCAGCCTGGCCAACATGGCGAAACCCC...TATCGCATTAGTCCATGTGGGGAAAAGAAAGATCAGATTGTTACTGTGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCATAAGATTAAATCCATaGGGTACATGCTGGTTCATA +
Preference number: 4 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGIRLNP*GTCWFI
Trigger: TATGAACCAGCATGTACCCCATGGATTTAATCTTAT...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAAGAGTTTTTGGGGCCATaGAGGCCCAGGTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKEFLGP*RPRSCF
Trigger: GAAGCAAGACCTGGGCCTCCATGGCCCCAAAAACTC...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAACCGGAGTCCATGATCTaGCCATCGTGTCATGGCTAC +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKPESMI*PSCHGY
Trigger: GTAGCCATGACACGATGGCCAGATCATGGACTCCGG...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTAGGGCAGTGACGCCGTaGAATACACCACCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFRAVTP*NTPPCQ
Trigger: CTGGCAAGGTGGTGTATTTCACGGCGTCACTGCCCT...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACCACGCAATAGGGCAGTaGCGCCGTGAAATACACCAC +
Preference number: 4 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDHAIGQ*RREIHH
Trigger: GTGGTGTATTTCACGGCGTCACTGCCCTATTGCGTG...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp ACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTTAGAGCAGTGGCCGCGTAGTCGTTaGATATGTCAAACCAGTAGT +
Preference number: 4 (lower is better)
Translates to: TETLQNSMISRKHWTLEQWPRSR*ICQTSS
Trigger: ACTACTGGTTTGACATATTCAACGACTACGCGGCCA...CTGCTCTAACGTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTATCTGTAAAACCGTaGGCGGCTGGGAAGCCCACA +
Preference number: 4 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDVSVKP*AAGKPT
Trigger: TGTGGGCTTCCCAGCCGCTCACGGTTTTACAGATAC...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGTTAATTTTGCACCACTaGCAAATAGGTCATCTTAGG +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKLILHH*QIGHLR
Trigger: CCTAAGATGACCTATTTGTCAGTGGTGCAAAATTAA...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTACCTCACAGTGGCTCCTaGCTCCTTTTCCAATGCACC +
Preference number: 4 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVPHSGS*LLFQCT
Trigger: GGTGCATTGGAAAAGGAGTCAGGAGCCACTGTGAGG...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACCCACGGCGTACGAGATaGAGGCGAACACGAACTGTA +
Preference number: 4 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDPRRTR*RRTRTV
Trigger: TACAGTTCGTGTTCGCCTGCATCTCGTACGCCGTGG...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp ACACACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAACTGCAGTTTTTGATTTaGGGGAACATCTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: THHGGMSAQTSNVVWGCKLQFLI*GNISLY
Trigger: ATACAGCGAGATGTTCCCGCAAATCAAAAACTGCAG...TTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp CACAGACACAGTAACAATCTGATCTTTCTTTTCCCCACATGGACTAATGCGATATGTGTAGACGATGAATaGCAGGCCAGTGCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HRHSNNLIFLFPTWTNAICVDDE*QASALD
Trigger: GTCCAGGGCACTGGCCTGGCATTCATCGTCTACACA...TATCGCATTAGTCCATGTGGGGAAAAGAAAGATCAGATTGTTACTGTGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTAGTCCCTGCAGCTTTCTaGTGTGCATTGTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVVPAAF*CALCPW
Trigger: CCAGGGACACAATGCACAGCAGAAAGCTGCAGGGAC...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAACAAGGAAAGGTACTGTaGCCAGATGTGCACGTAGGC +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKQGKVL*PDVHVG
Trigger: GCCTACGTGCACATCTGGGCACAGTACCTTTCCTTG...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR GCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTATTGGGGTTGGCCAGCTaGTCTATCTTGCCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVLGLAS*SILPVD
Trigger: GTCCACTGGCAAGATAGAGCAGCTGGCCAACCCCAA...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000353278.8
CDS-3UTR CCA 90 bp TTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTGCTGTAAGAGAATTCCATTGGTGGCTCCGTaGAGCGTGAGGCCCCTGATG +
Preference number: 4 (lower is better)
Translates to: LLKTVEDLSKAYFCCKRIPLVAP*SVRPLM
Trigger: CATCAGGGGCCTCACGCTCCACGGAGCCACCAATGG...AATTCTCTTACAGCAAAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTCCAGGCCTTGGGGTTaGCCAGCTGCTCTATCTTGG +
Preference number: 4 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFSRPWG*PAALSW
Trigger: CCAAGATAGAGCAGCTGGCCAACCCCAAGGCCTGGA...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCTGTCCTCTAATATTTTaGTGTCTCTTCAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTCPLIF*CLFSQK
Trigger: TTTTTGGCTGAAGAGACACCAAAATATTAGAGGACA...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CACTTTAGGGGTAACGACCTACTCACAGTGGCTCCTGACTCCTTTTCCAATGCACACAGACTTCTAATGTaGTTTGGGGTTGCAAACTGT +
Preference number: 4 (lower is better)
Translates to: HFRGNDLLTVAPDSFSNAHRLLM*FGVANC
Trigger: ACAGTTTGCAACCCCAAACCACATTAGAAGTCTGTG...TGCATTGGAAAAGGAGTCAGGAGCCACTGTGAGTAGGTCGTTACCCCTAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456124.6
CDS-3UTR CCA 90 bp CCTTCCTCTTATCTCAACTGCAAAGAGGCCTCCCTCCTTCACTATTCCTCCTCACCATGGGGTACATGCTaGTTCATACATTTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: PSSYLNCKEASLLHYSSSPWGTC*FIHLKV
Trigger: GACTTTCAAATGTATGAACCAGCATGTACCCCATGG...TGAGGAGGAATAGTGAAGGAGGGAGGCCTCTTTGCAGTTGAGATAAGAGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CACTTTAGGGGTAACGACCTACTCACAGTGGCTCCTGACTCCTTTTCCAATGCACCATGGGGTACATGCTaGTTCATACATTTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: HFRGNDLLTVAPDSFSNAPWGTC*FIHLKV
Trigger: GACTTTCAAATGTATGAACCAGCATGTACCCCATGG...TGCATTGGAAAAGGAGTCAGGAGCCACTGTGAGTAGGTCGTTACCCCTAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456124.6
CDS-3UTR CCA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTATGCTCCCAGGTGGTTaGAATGCGCTGCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFMLPGG*NALQGG
Trigger: CCCACCTTGCAGCGCATTCCAACCACCTGGGAGCAT...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGGTCGCTCCAGCTTATTaGAGGGTGGGTGGACAAATG +
Preference number: 4 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVVAPAY*RVGGQM
Trigger: CATTTGTCCACCCACCCTCCAATAAGCTGGAGCGAC...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACCCGGAGTCCATGATCTaGCCATCGTGTCATGGCTAC +
Preference number: 4 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDPESMI*PSCHGY
Trigger: GTAGCCATGACACGATGGCCAGATCATGGACTCCGG...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp GCCAGCATATCTCACCTCCAGCCACAGGGCGGTTTTCTCCTATCTCAGAATAGATTAATTTTGCACCACTaGCAAATAGGTCATCTTAGG +
Preference number: 4 (lower is better)
Translates to: ASISHLQPQGGFLLSQNRLILHH*QIGHLR
Trigger: CCTAAGATGACCTATTTGTCAGTGGTGCAAAATTAA...TCTATTCTGAGATAGGAGAAAACCGCCCTGTGGCTGGAGGTGAGATATGCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTCCTCACAGTGGCTCCTaGCTCCTTTTCCAATGCACC +
Preference number: 4 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFPHSGS*LLFQCT
Trigger: GGTGCATTGGAAAAGGAGTCAGGAGCCACTGTGAGG...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAACCTCCTAGGTTCAAATaGTTCTTGTGCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKPPRFK*FLCLSS
Trigger: GCTGCTGAGGCACAAGAATCATTTGAACCTAGGAGG...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTAGTCTTTCCCTTCCCATaGGGCCATATCTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVVFPFP*GHISGC
Trigger: ACAGCCTGAGATATGGCCTCATGGGAAGGGAAAGAC...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGGCCAACGTCCCAGGTaGGTGTTTGTGTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDGQRPR*VFVSSK
Trigger: CTTTGAAGACACAAACACTCACCTGGGACGTTGGCC...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACTGCTGTGTTTGCCATTaGGTGTGCCGGCTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDCCVCH*VCRLFK
Trigger: CTTGAAGAGCCGGCACACTCAATGGCAAACACAGCA...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTGTGTAGACGATGAATaGCAGGCCAGTGCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFCVDDE*QASALD
Trigger: GTCCAGGGCACTGGCCTGGCATTCATCGTCTACACA...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACCCCGATGACAGCCAGTaGATAGGCCGGGTAATCTTT +
Preference number: 4 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDPDDSQ*IGRVIF
Trigger: AAAGATTACCCGGCCTATGCACTGGCTGTCATCGGG...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp TTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTGCTGTAAGAGAATTACACCACCTTGCCAGTaGACTCGGTGCCACGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLKTVEDLSKAYFCCKRITPPCQ*TRCHAG
Trigger: TCCTGCGTGGCACCGAGTCCACTGGCAAGGTGGTGT...AATTCTCTTACAGCAAAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTGCTGTAAGAGAATTAGGCCGGGTAATCTTTaGTCACGAGCTGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LLKTVEDLSKAYFCCKRIRPGNL*SRAGPG
Trigger: CCCAGGGCCAGCTCGTGACCAAAGATTACCCGGCCT...AATTCTCTTACAGCAAAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CCTTCCTCTTATCTCAACTGCAAAGAGGCCTCCCTCCTTCACTATTCCTCCTCAATTCTAGGGCTTTCCTaGAATGAAGGATGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: PSSYLNCKEASLLHYSSSILGLS*NEGCSY
Trigger: ATAACTGCATCCTTCATTCCAGGAAAGCCCTAGAAT...TGAGGAGGAATAGTGAAGGAGGGAGGCCTCTTTGCAGTTGAGATAAGAGGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGATAAGATTAAATCCATaGGGTACATGCTGGTTCATA +
Preference number: 4 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKIRLNP*GTCWFI
Trigger: TATGAACCAGCATGTACCCCATGGATTTAATCTTAT...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAACCCCAGGGTGTGGTGTaGGCATCTGGAGTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKPQGVV*ASGVLN
Trigger: ATTTAAAACTCCAGATGCCCACACCACACCCTGGGG...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTGCTGTAAGAGAATTGGTGGCCCCAGGGTGTaGTGTGGGCATCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: LLKTVEDLSKAYFCCKRIGGPRV*CGHLEF
Trigger: AAACTCCAGATGCCCACACCACACCCTGGGGCCACC...AATTCTCTTACAGCAAAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR TCA 90 bp TTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTGCTGTAAGAGAATTACCCTGACTGATGACTaGTCCCAGGTGGCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: LLKTVEDLSKAYFCCKRITLTDD*SQVALS
Trigger: ACTCAGGGCCACCTGGGATCAGTCATCAGTCAGGGT...AATTCTCTTACAGCAAAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTAGCTTCTGGCAGTTGTTaGATGGCTCATTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVASGSC*MAHCSW
Trigger: CCAGCTACAATGAGCCATCCAACAACTGCCAGAAGC...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAACAAGGTCAAAAGTGTTaGTCAGCAGCAGACTCACCT +
Preference number: 4 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKQGQKC*SAADSP
Trigger: AGGTGAGTCTGCTGCTGACCAACACTTTTGACCTTG...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACCTCGCTGTATTTGCTTaGGTAGGCAGATGCGAGGTA +
Preference number: 4 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDLAVFA*VGRCEV
Trigger: TACCTCGCATCTGCCTACCCAAGCAAATACAGCGAG...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTAAGCACCGACCACAGCTaGGACACCTCCATGTTTTTA +
Preference number: 4 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVSTDHS*DTSMFL
Trigger: TAAAAACATGGAGGTGTCCCAGCTGTGGTCGGTGCT...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGAGAAAGGATCCCTTTaGGGGTCCCAGACAAAGATC +
Preference number: 4 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDEKGSL*GSQTKI
Trigger: GATCTTTGTCTGGGACCCCCAAAGGGATCCTTTCTC...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTACCCCAGGGTGTGGTGTaGGCATCTGGAGTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVPQGVV*ASGVLN
Trigger: ATTTAAAACTCCAGATGCCCACACCACACCCTGGGG...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp TTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTGCTGTAAGAGAATTGCTCTATCTTGCCAGTaGACTCGGTGCCACGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLKTVEDLSKAYFCCKRIALSCQ*TRCHAG
Trigger: TCCTGCGTGGCACCGAGTCCACTGGCAAGATAGAGC...AATTCTCTTACAGCAAAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000353278.8
CDS-3UTR TCA 90 bp TTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTGCTGTAAGAGAATTTGCCAATGGCACAGTTaGCAAGGCACACCAGACCTG +
Preference number: 4 (lower is better)
Translates to: LLKTVEDLSKAYFCCKRICQWHS*QGTPDL
Trigger: CAGGTCTGGTGTGCCTTGTCAACTGTGCCATTGGCA...AATTCTCTTACAGCAAAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTGACACGATGATGGCGTaGTTCTGGCAGTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFDTMMA*FWQLLD
Trigger: ATCCAACAACTGCCAGAAGCACGCCATCATCGTGTC...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp TTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTGCTGTAAGAGAATTCTGTGTTCCCCAGCATaGTCCCAATGCCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: LLKTVEDLSKAYFCCKRILCSPA*SQCPAS
Trigger: TGATGCTGGGCATTGGGAGCATGCTGGGGAACACAG...AATTCTCTTACAGCAAAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTACCAGAAGTACTGTGTaGAGGACGCCTTCTCACACT +
Preference number: 4 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFTRSTV*RTPSHT
Trigger: AGTGTGAGAAGGCGTCCTCCACACAGTACTTCTGGT...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTGCTGTAAGAGAATTGAGTTTTTGGGGCCATaGAGGCCCAGGTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLKTVEDLSKAYFCCKRIEFLGP*RPRSCF
Trigger: GAAGCAAGACCTGGGCCTCCATGGCCCCAAAAACTC...AATTCTCTTACAGCAAAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTACAGAGCAGTATTGCTaGCAGCATATCTCACCTCCA +
Preference number: 4 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFTEQYC*QHISPP
Trigger: TGGAGGTGAGATATGCTGGCAGCAATACTGCTCTGT...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATATAAGATTAAATCCATaGGGTACATGCTGGTTCATA +
Preference number: 4 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDIRLNP*GTCWFI
Trigger: TATGAACCAGCATGTACCCCATGGATTTAATCTTAT...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTGGACAAATGTCGACATaGCCACTTTTGTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFGQMST*PLLCSI
Trigger: GATACTGCACAAAAGTGGCCATGTCGACATTTGTCC...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR TCA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTTATCTTTTCACTCCTaGGGCTACCTGGTATTCAAG +
Preference number: 4 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFLSFHS*GYLVFK
Trigger: CTTGAATACCAGGTAGCCTCAGGAGTGAAAAGATAA...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR GCA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTCTGCAGTTTTTGATTTaGGGGAACATCTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFLQFLI*GNISLY
Trigger: ATACAGCGAGATGTTCCCGCAAATCAAAAACTGCAG...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CCA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGCGAGACATTTTCATCTaGAGCACATTATTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVRDIFI*STLFCN
Trigger: GTTACAGAATAATGTGCTCCAGATGAAAATGTCTCG...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp TTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTGCTGTAAGAGAATTCAGCTTATTGGAGGGTaGGTGGACAAATGTCGACAT +
Preference number: 4 (lower is better)
Translates to: LLKTVEDLSKAYFCCKRIQLIGG*VDKCRH
Trigger: ATGTCGACATTTGTCCACCCACCCTCCAATAAGCTG...AATTCTCTTACAGCAAAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTACTAAGATTTAAAGGGTaGAAGGGGAACACAGAAATT +
Preference number: 4 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVLRFKG*KGNTEI
Trigger: AATTTCTGTGTTCCCCTTCCACCCTTTAAATCTTAG...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTAATATTAAGCCTATaGGAAAGTCAGAGCCACTTT +
Preference number: 4 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDVILSL*ESQSHF
Trigger: AAAGTGGCTCTGACTTTCCCATAGGCTTAATATTAC...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CCA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTACGAGACATTTTCATCTaGAGCACATTATTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVRDIFI*STLFCN
Trigger: GTTACAGAATAATGTGCTCCAGATGAAAATGTCTCG...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS CCA 90 bp ACACGAACTGTAGCGAGTTGGCCCACAGCGGCCGCGCTTTCTCCATaGCCCCGGCCTCGGCGCGCTCGGCTCCGGCTCGGGGGTCCGGCA +
Preference number: 5 (lower is better)
Translates to: TRTVASWPTAAALSP*PRPRRARLRLGGPA
Trigger: TGCCGGACCCCCGAGCCGGAGCCGAGCGCGCCGAGGCCGGGGCCATGGAGAAAGCGCGGCCGCTGTGGGCCAACTCGCTACAGTTCGTGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000413781.1
ENST00000456124.6
CDS GCA 90 bp AGGCCAGCAGGGACAGGGCTGATGATCCCTGGGTGGAATCCCAAATaGTCAGACCCGCAACAGGAGAGTAGCCCAGAGAGGGGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: RPAGTGLMIPGWNPK*SDPQQESSPERGRS
Trigger: GCTCCTTCCCCTCTCTGGGCTACTCTCCTGTTGCGGGTCTGAGCATTTGGGATTCCACCCAGGGATCATCAGCCCTGTCCCTGCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473146.5
CDS CCA 90 bp AGGAGGAGGCACAGCGCCGGCTCCCACTGCACACCCCCGTTCTCCTaGAGGGACGGCGAGATATTGAGGGTTTTCCTGTACCAGAAGTAC +
Preference number: 5 (lower is better)
Translates to: RRRHSAGSHCTPPFS*RDGEILRVFLYQKY
Trigger: GTACTTCTGGTACAGGAAAACCCTCAATATCTCGCCGTCCCTCCAGGAGAACGGGGGTGTGCAGTGGGAGCCGGCGCTGTGCCTCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000413781.1
ENST00000456124.6
CDS CCA 90 bp GTGGCTGCATTGATCCAGGCCTTGGGGTTGGCCAGCTGCTCTATCTaGAAGGCCAGCAGGGACAGGGCTGATGATCCCTGGGTGGAATCC +
Preference number: 5 (lower is better)
Translates to: VAALIQALGLASCSI*KASRDRADDPWVES
Trigger: GGATTCCACCCAGGGATCATCAGCCCTGTCCCTGCTGGCCTTCCAGATAGAGCAGCTGGCCAACCCCAAGGCCTGGATCAATGCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473146.5
CDS-3UTR CAA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTGCATTGATCCAGGCCTaGGGGTTGGCCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVALIQA*GLASCS
Trigger: AGAGCAGCTGGCCAACCCCAAGGCCTGGATCAATGC...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS CCA 90 bp GTTACTGCACAGGTCTGGGCATTCAGAGATGGAGGGGGTGTGGCCTaGCAGGGGAGGTCTAGGTGTGGGTTGACTCTCGGCACTGACATC +
Preference number: 5 (lower is better)
Translates to: VTAQVWAFRDGGGVA*QGRSRCGLTLGTDI
Trigger: GATGTCAGTGCCGAGAGTCAACCCACACCTAGACCTCCCCTGCCAGGCCACACCCCCTCCATCTCTGAATGCCCAGACCTGTGCAGTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473146.5
CDS-3UTR CAA 90 bp AGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTAAATGCTACGAACTGTAGCGAGTaGGCCCACAGCGGCCGCGCT +
Preference number: 5 (lower is better)
Translates to: RSDGWPQGVVWASGVLNATNCSE*AHSGRA
Trigger: AGCGCGGCCGCTGTGGGCCAACTCGCTACAGTTCGT...AGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CTCCTCAGCACCGACCCTTTACAGGTGTCGGGCTGGGGGACAGTCAGGTCTTTCATGTACATGAGGCCATaGGTGGCTCCGTGGAGCGTG +
Preference number: 5 (lower is better)
Translates to: LLSTDPLQVSGWGTVRSFMYMRP*VAPWSV
Trigger: CACGCTCCACGGAGCCACCAATGGCCTCATGTACAT...GAAAGACCTGACTGTCCCCCAGCCCGACACCTGTAAAGGGTCGGTGCTGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358525.9
CDS-3UTR CAA 90 bp CTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCCGCATTGATCCAGGCCTaGGGGTTGGCCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LVLDPPSETLEKGSLWGSALIQA*GLASCS
Trigger: AGAGCAGCTGGCCAACCCCAAGGCCTGGATCAATGC...GGACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCGGAGGCGTCCCAGGCTaGATACTTCAGGGTCCCCGT +
Preference number: 5 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGGGVPG*ILQGPR
Trigger: ACGGGGACCCTGAAGTATCAAGCCTGGGACGCCTCC...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CACCACGGGAGGGTGTGCGTTCTCCCAAGGGAGTTTTCTTCCTGCACACCTTCCTGGGGTTTCGCCATGTaGGCCAGGCTGGCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: HHGRVCVLPREFSSCTPSWGFAM*ARLASN
Trigger: GTTTGAGGCCAGCCTGGCCAACATGGCGAAACCCCA...GGAAGGTGTGCAGGAAGAAAACTCCCTTGGGAGAACGCACACCCTCCCGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS CCA 90 bp GCTCTATCTGGAAGGCCAGCAGGGACAGGGCTGATGATCCCTGGGTaGAATCCCAAATGCTCAGACCCGCAACAGGAGAGTAGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: ALSGRPAGTGLMIPG*NPKCSDPQQESSPE
Trigger: CTCTGGGCTACTCTCCTGTTGCGGGTCTGAGCATTTGGGATTCCACCCAGGGATCATCAGCCCTGTCCCTGCTGGCCTTCCAGATAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473146.5
CDS-3UTR CAA 90 bp CTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCCATGTACATGAGGCCATaGGTGGCTCCGTGGAGCGTG +
Preference number: 5 (lower is better)
Translates to: LVLDPPSETLEKGSLWGSMYMRP*VAPWSV
Trigger: CACGCTCCACGGAGCCACCAATGGCCTCATGTACAT...GGACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTGCATTGATCCAGGCCTaGGGGTTGGCCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: PPGFRADSVLCLPLSVPAALIQA*GLASCS
Trigger: AGAGCAGCTGGCCAACCCCAAGGCCTGGATCAATGC...AGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCGGAGGCGTCCCAGGCTaGATACTTCAGGGTCCCCGT +
Preference number: 5 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTGGVPG*ILQGPR
Trigger: ACGGGGACCCTGAAGTATCAAGCCTGGGACGCCTCC...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTGGGGTTTCGCCATGTaGGCCAGGCTGGCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGWGFAM*ARLASN
Trigger: GTTTGAGGCCAGCCTGGCCAACATGGCGAAACCCCA...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp CACCACGGGAGGGTGTGCGTTCTCCCAAGGGAGTTTTCTTCCTGCACACCTTCCGACTCGGTGCTGTGTTaGCCATTGAGTGTGCCGGCT +
Preference number: 5 (lower is better)
Translates to: HHGRVCVLPREFSSCTPSDSVLC*PLSVPA
Trigger: AGCCGGCACACTCAATGGCAAACACAGCACCGAGTC...GGAAGGTGTGCAGGAAGAAAACTCCCTTGGGAGAACGCACACCCTCCCGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp CACCACGGGAGGGTGTGCGTTCTCCCAAGGGAGTTTTCTTCCTGCACACCTTCCAATGCTCCCAGGTGGTaGGAATGCGCTGCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: HHGRVCVLPREFSSCTPSNAPRW*ECAARW
Trigger: CCACCTTGCAGCGCATTCCAACCACCTGGGAGCATT...GGAAGGTGTGCAGGAAGAAAACTCCCTTGGGAGAACGCACACCCTCCCGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTTCACCTAGGGAGTTTTaGGGGCCATGGAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGSPREF*GPWRPR
Trigger: CCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGA...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS GCA 90 bp CCTGGCCCCATCCACTCCCTGGCAGATGAAACACACACCTCAAGCTaGACACCTCCCAGGGCTAAGGTGCTGTGGAGAATACAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: PGPIHSLADETHTSS*TPPRAKVLWRIQVL
Trigger: TAGCACCTGTATTCTCCACAGCACCTTAGCCCTGGGAGGTGTGCAGCTTGAGGTGTGTGTTTCATCTGCCAGGGAGTGGATGGGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473146.5
CDS-3UTR CAA 90 bp TCCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCATCTGGGTGGCTGCATaGATCCAGGCCTTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: SSRIQSRLGAVFAIECAGIWVAA*IQALGL
Trigger: CAACCCCAAGGCCTGGATCAATGCAGCCACCCAGAT...GCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCGACTCGGTGCTGTGTTaGCCATTGAGTGTGCCGGCT +
Preference number: 5 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVDSVLC*PLSVPA
Trigger: AGCCGGCACACTCAATGGCAAACACAGCACCGAGTC...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp ACACACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAAACGAACTGTAGCGAGTaGGCCCACAGCGGCCGCGCT +
Preference number: 5 (lower is better)
Translates to: THHGGMSAQTSNVVWGCKTNCSE*AHSGRA
Trigger: AGCGCGGCCGCTGTGGGCCAACTCGCTACAGTTCGT...TTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp AGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTAAATGCTATCCAGGCCTTGGGGTaGGCCAGCTGCTCTATCTTG +
Preference number: 5 (lower is better)
Translates to: RSDGWPQGVVWASGVLNAIQALG*ASCSIL
Trigger: CAAGATAGAGCAGCTGGCCAACCCCAAGGCCTGGAT...AGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCATCTGGGTGGCTGCATaGATCCAGGCCTTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTIWVAA*IQALGL
Trigger: CAACCCCAAGGCCTGGATCAATGCAGCCACCCAGAT...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCTGGCTGGAGATGATCTaGCTGTCTGTCAGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVWLEMI*LSVRGV
Trigger: CACCCCTCTGACAGACAGCAAGATCATCTCCAGCCA...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAACTGCCTGAGATGGCCTCCTaGGGCAGGTGGCTGGAGATG +
Preference number: 5 (lower is better)
Translates to: HHGGMSAQTSNVVWGCKLPEMAS*GRWLEM
Trigger: CATCTCCAGCCACCTGCCCAAGGAGGCCATCTCAGG...CAGTTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp AGGGGTAACGACCTACTCACAGTGGCTCCTGACTCCTTTTCCAATGCACCAAGACCTGAGATGGCCTCCTaGGGCAGGTGGCTGGAGATG +
Preference number: 5 (lower is better)
Translates to: RGNDLLTVAPDSFSNAPRPEMAS*GRWLEM
Trigger: CATCTCCAGCCACCTGCCCAAGGAGGCCATCTCAGG...TCTTGGTGCATTGGAAAAGGAGTCAGGAGCCACTGTGAGTAGGTCGTTACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456124.6
CDS-3UTR CAA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTAGAGAAAGGATCCCTTaGGGGGTCCCAGACAAAGAT +
Preference number: 5 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVRERIP*GVPDKD
Trigger: ATCTTTGTCTGGGACCCCCAAAGGGATCCTTTCTCT...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCAATACCCAGGCTTTCTaGGGCAGAGGTCCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTNTQAF*GRGPCS
Trigger: GCTGCAGGGACCTCTGCCCAAGAAAGCCTGGGTATT...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCAATGCTCCCAGGTGGTaGGAATGCGCTGCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTNAPRW*ECAARW
Trigger: CCACCTTGCAGCGCATTCCAACCACCTGGGAGCATT...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CACCACGGGAGGGTGTGCGTTCTCCCAAGGGAGTTTTCTTCCTGCACACCTTCCTGTCGCTCCAGCTTATaGGAGGGTGGGTGGACAAAT +
Preference number: 5 (lower is better)
Translates to: HHGRVCVLPREFSSCTPSCRSSL*EGGWTN
Trigger: ATTTGTCCACCCACCCTCCAATAAGCTGGAGCGACA...GGAAGGTGTGCAGGAAGAAAACTCCCTTGGGAGAACGCACACCCTCCCGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp CTCCTCAGCACCGACCCTTTACAGGTGTCGGGCTGGGGGACAGTCAGGTCTTTCGGATGGAATGTCCCTTaGTCGCTCCAGCTTATTGGA +
Preference number: 5 (lower is better)
Translates to: LLSTDPLQVSGWGTVRSFGWNVP*SLQLIG
Trigger: TCCAATAAGCTGGAGCGACAAAGGGACATTCCATCC...GAAAGACCTGACTGTCCCCCAGCCCGACACCTGTAAAGGGTCGGTGCTGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCAGGGACGGCGAGATATaGAGGGTTTTCCTGTACCAG +
Preference number: 5 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVRDGEI*RVFLYQ
Trigger: CTGGTACAGGAAAACCCTCAATATCTCGCCGTCCCT...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTTTCACCTGCTCCAGGTaGCTGGCTGTCAAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGFTCSR*LAVKKP
Trigger: TGGCTTTTTGACAGCCAGCAACCTGGAGCAGGTGAA...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CCTTCCTCTTATCTCAACTGCAAAGAGGCCTCCCTCCTTCACTATTCCTCCTCACCTGAGATGGCCTCCTaGGGCAGGTGGCTGGAGATG +
Preference number: 5 (lower is better)
Translates to: PSSYLNCKEASLLHYSSSPEMAS*GRWLEM
Trigger: CATCTCCAGCCACCTGCCCAAGGAGGCCATCTCAGG...TGAGGAGGAATAGTGAAGGAGGGAGGCCTCTTTGCAGTTGAGATAAGAGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGTGGAGTGGCATGATCTaGGCTCACAGCAACCGCCAC +
Preference number: 5 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKWSGMI*AHSNRH
Trigger: GTGGCGGTTGCTGTGAGCCAAGATCATGCCACTCCA...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp GCCAGCATATCTCACCTCCAGCCACAGGGCGGTTTTCTCCTATCTCAGAATAGATCACCTAGGGAGTTTTaGGGGCCATGGAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: ASISHLQPQGGFLLSQNRSPREF*GPWRPR
Trigger: CCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGA...TCTATTCTGAGATAGGAGAAAACCGCCCTGTGGCTGGAGGTGAGATATGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTGCCAGCTGCTCTATCTaGGGAGTGAACATGTACATG +
Preference number: 5 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGASCSI*GVNMYM
Trigger: CATGTACATGTTCACTCCCAAGATAGAGCAGCTGGC...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCTCTCGCTGTATTTGCTaGGGTAGGCAGATGCGAGGT +
Preference number: 5 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTSRCIC*GRQMRG
Trigger: ACCTCGCATCTGCCTACCCAAGCAAATACAGCGAGA...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCCTCCAAGCTGCAGTTTTaGATTTGCGGGAACATCTCG +
Preference number: 5 (lower is better)
Translates to: LVLDPPSETLEKGSLWGSSKLQF*ICGNIS
Trigger: CGAGATGTTCCCGCAAATCAAAAACTGCAGCTTGGA...GGACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGTGGCTGGAGATGATCTaGCTGTCTGTCAGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKWLEMI*LSVRGV
Trigger: CACCCCTCTGACAGACAGCAAGATCATCTCCAGCCA...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CACCACGGGAGGGTGTGCGTTCTCCCAAGGGAGTTTTCTTCCTGCACACCTTCCAGGATGCAGTTATCTTaGAGACCGGCTTTCATAGCC +
Preference number: 5 (lower is better)
Translates to: HHGRVCVLPREFSSCTPSRMQLS*RPAFIA
Trigger: GGCTATGAAAGCCGGTCTCAAAGATAACTGCATCCT...GGAAGGTGTGCAGGAAGAAAACTCCCTTGGGAGAACGCACACCCTCCCGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTAGAGAAAGGATCCCTTaGGGGGTCCCAGACAAAGAT +
Preference number: 5 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGRERIP*GVPDKD
Trigger: ATCTTTGTCTGGGACCCCCAAAGGGATCCTTTCTCT...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAACTGTGGAGTGGCATGATCTaGGCTCACAGCAACCGCCAC +
Preference number: 5 (lower is better)
Translates to: HHGGMSAQTSNVVWGCKLWSGMI*AHSNRH
Trigger: GTGGCGGTTGCTGTGAGCCAAGATCATGCCACTCCA...CAGTTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp TCTGGTCCTGGACCCACCGTCAGAGACCTTAGAGAAAGGATCCCTTTGGGGGTCGCTTTCTGCTGTGCATaGTGTCCCTGGTTAATCGAG +
Preference number: 5 (lower is better)
Translates to: SGPGPTVRDLRERIPLGVAFCCA*CPWLIE
Trigger: CTCGATTAACCAGGGACACAATGCACAGCAGAAAGC...GACCCCCAAAGGGATCCTTTCTCTAAGGTCTCTGACGGTGGGTCCAGGACCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS TCA 90 bp TGCCCTGGACGGCCGTGTCTAGCTCCGATTCCAAGCTGCAGTTTTTaGTTTGCGGGAACATCTCGCTGTATTTGCTTGGGTAGGCAGATG +
Preference number: 5 (lower is better)
Translates to: CPGRPCLAPIPSCSF*FAGTSRCICLGRQM
Trigger: CATCTGCCTACCCAAGCAAATACAGCGAGATGTTCCCGCAAATCAAAAACTGCAGCTTGGAATCGGAGCTAGACACGGCCGTCCAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
ENST00000473146.5
CDS GCA 90 bp CAAGCTGCACACCTCCCAGGGCTAAGGTGCTGTGGAGAATACAGGTaGTATGTGGAGGACATAAGGTGCTACGTATCCTCCATAGCACCT +
Preference number: 5 (lower is better)
Translates to: QAAHLPGLRCCGEYR*YVEDIRCYVSSIAP
Trigger: AGGTGCTATGGAGGATACGTAGCACCTTATGTCCTCCACATAGCACCTGTATTCTCCACAGCACCTTAGCCCTGGGAGGTGTGCAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473146.5
CDS-3UTR CAA 90 bp ACACACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAAATCCAGGCCTTGGGGTaGGCCAGCTGCTCTATCTTG +
Preference number: 5 (lower is better)
Translates to: THHGGMSAQTSNVVWGCKIQALG*ASCSIL
Trigger: CAAGATAGAGCAGCTGGCCAACCCCAAGGCCTGGAT...TTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CACTTTAGGGGTAACGACCTACTCACAGTGGCTCCTGACTCCTTTTCCAATGCAATCTGGGTGGCTGCATaGATCCAGGCCTTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: HFRGNDLLTVAPDSFSNAIWVAA*IQALGL
Trigger: CAACCCCAAGGCCTGGATCAATGCAGCCACCCAGAT...TGCATTGGAAAAGGAGTCAGGAGCCACTGTGAGTAGGTCGTTACCCCTAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456124.6
CDS-3UTR CAA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTGCTGCAGTTTTTGATTaGCGGGAACATCTCGCTGTA +
Preference number: 5 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGAAVFD*REHLAV
Trigger: TACAGCGAGATGTTCCCGCAAATCAAAAACTGCAGC...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTTCCAAGCTGCAGTTTTaGATTTGCGGGAACATCTCG +
Preference number: 5 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGSKLQF*ICGNIS
Trigger: CGAGATGTTCCCGCAAATCAAAAACTGCAGCTTGGA...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTGTGGTCTTGATAGAGTaGGCCACGATGTCCAAATGT +
Preference number: 5 (lower is better)
Translates to: PPGFRADSVLCLPLSVPAVVLIE*ATMSKC
Trigger: ACATTTGGACATCGTGGCCAACTCTATCAAGACCAC...AGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp CCTCCAGGATTCAGAGCAGACTCGGTGCTGTGTTTGCCATTGAGTGTGCCGGCTGTGGTATTTGTGGTCTaGATAGAGTTGGCCACGATG +
Preference number: 5 (lower is better)
Translates to: PPGFRADSVLCLPLSVPAVVFVV*IELATM
Trigger: CATCGTGGCCAACTCTATCAAGACCACAAATACCAC...AGCCGGCACACTCAATGGCAAACACAGCACCGAGTCTGCTCTGAATCCTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp TGTAGCAGGGCAACAGGTGGGAAGAAGGTCAGCAGGGAAACATGTGAGCAAAGGGTGCTGTGTTTGCCATaGAGTGTGCCGGCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: CSRATGGKKVSRETCEQRVLCLP*SVPALQ
Trigger: TTGAAGAGCCGGCACACTCAATGGCAAACACAGCAC...CCTTTGCTCACATGTTTCCCTGCTGACCTTCTTCCCACCTGTTGCCCTGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGGTGCTGTGTTTGCCATaGAGTGTGCCGGCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKVLCLP*SVPALQ
Trigger: TTGAAGAGCCGGCACACTCAATGGCAAACACAGCAC...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp ACACACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAAGACTCGGTGCTGTGTTaGCCATTGAGTGTGCCGGCT +
Preference number: 5 (lower is better)
Translates to: THHGGMSAQTSNVVWGCKDSVLC*PLSVPA
Trigger: AGCCGGCACACTCAATGGCAAACACAGCACCGAGTC...TTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTGGTGCTTCATCTGTTaGAGTTCCATGAGCAAAAAC +
Preference number: 5 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVWCFIC*SSMSKN
Trigger: GTTTTTGCTCATGGAACTCAAACAGATGAAGCACCA...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS CCA 90 bp TTGGGTAGGCAGATGCGAGGTAGCCCTTCACCTGCTCCAGGTTGCTaGCTGTCAAAAAGCCATCTTCAAGGTCAAAAGTGTTGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: LGRQMRGSPSPAPGC*LSKSHLQGQKCWSA
Trigger: TGCTGACCAACACTTTTGACCTTGAAGATGGCTTTTTGACAGCCAGCAACCTGGAGCAGGTGAAGGGCTACCTCGCATCTGCCTACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
ENST00000473146.5
CDS CCA 90 bp CAAGCTGCAGTTTTTGATTTGCGGGAACATCTCGCTGTATTTGCTTaGGTAGGCAGATGCGAGGTAGCCCTTCACCTGCTCCAGGTTGCT +
Preference number: 5 (lower is better)
Translates to: QAAVFDLREHLAVFA*VGRCEVALHLLQVA
Trigger: AGCAACCTGGAGCAGGTGAAGGGCTACCTCGCATCTGCCTACCCAAGCAAATACAGCGAGATGTTCCCGCAAATCAAAAACTGCAGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
ENST00000473146.5
CDS CCA 90 bp GAAACACACACCTCAAGCTGCACACCTCCCAGGGCTAAGGTGCTGTaGAGAATACAGGTGCTATGTGGAGGACATAAGGTGCTACGTATC +
Preference number: 5 (lower is better)
Translates to: ETHTSSCTPPRAKVL*RIQVLCGGHKVLRI
Trigger: GATACGTAGCACCTTATGTCCTCCACATAGCACCTGTATTCTCCACAGCACCTTAGCCCTGGGAGGTGTGCAGCTTGAGGTGTGTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473146.5
CDS-3UTR CAA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAAACGAACTGTAGCGAGTaGGCCCACAGCGGCCGCGCT +
Preference number: 5 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKTNCSE*AHSGRA
Trigger: AGCGCGGCCGCTGTGGGCCAACTCGCTACAGTTCGT...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CCTTCCTCTTATCTCAACTGCAAAGAGGCCTCCCTCCTTCACTATTCCTCCTCAGTGAAATACACCACCTaGCCAGTGGACTCGGTGCCA +
Preference number: 5 (lower is better)
Translates to: PSSYLNCKEASLLHYSSSVKYTT*PVDSVP
Trigger: TGGCACCGAGTCCACTGGCAAGGTGGTGTATTTCAC...TGAGGAGGAATAGTGAAGGAGGGAGGCCTCTTTGCAGTTGAGATAAGAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358525.9
CDS-3UTR CAA 90 bp GAAGCACTGGACGTTAGAGCAGGAAGGGACTCGCTCACTTTAGGGGTAACGACCGCTGCAGTTTTTGATTaGCGGGAACATCTCGCTGTA +
Preference number: 5 (lower is better)
Translates to: EALDVRAGRDSLTLGVTTAAVFD*REHLAV
Trigger: TACAGCGAGATGTTCCCGCAAATCAAAAACTGCAGC...GGTCGTTACCCCTAAAGTGAGCGAGTCCCTTCCTGCTCTAACGTCCAGTGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp AGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTTAAATGCTTCCAAGCTGCAGTTTTaGATTTGCGGGAACATCTCG +
Preference number: 5 (lower is better)
Translates to: RSDGWPQGVVWASGVLNASKLQF*ICGNIS
Trigger: CGAGATGTTCCCGCAAATCAAAAACTGCAGCTTGGA...AGCATTTAAAACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGATGGCTGGAGATGATCTaGCTGTCTGTCAGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: AAFCCALCPWLIENGEWRWLEMI*LSVRGV
Trigger: CACCCCTCTGACAGACAGCAAGATCATCTCCAGCCA...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATAGTGATCCACCCACCTaGACCCCCAAGGTGCTAGGA +
Preference number: 5 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDSDPPT*TPKVLG
Trigger: TCCTAGCACCTTGGGGGTCAAGGTGGGTGGATCACT...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGGCTTTCTGCTGTGCATaGTGTCCCTGGTTAATCGAG +
Preference number: 5 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKAFCCA*CPWLIE
Trigger: CTCGATTAACCAGGGACACAATGCACAGCAGAAAGC...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp ACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTTAGAGCAGTCACCTAGGGAGTTTTaGGGGCCATGGAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TETLQNSMISRKHWTLEQSPREF*GPWRPR
Trigger: CCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGA...CTGCTCTAACGTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp TTTGGCTGCACATCGGATCACCTAGGGAGTTTTTGGGGCCATGGAGGCCCAGGTGGCTCAAGAGGATTCTaGAGAAATGTTCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: FGCTSDHLGSFWGHGGPGGSRGF*RNVLLF
Trigger: GAAGAGCAGAACATTTCTCAAGAATCCTCTTGAGCC...ACCTGGGCCTCCATGGCCCCAAAAACTCCCTAGGTGATCCGATGTGCAGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp GCTTCCAGAAGGTCTGATGGGTGGCCCCAGGGTGTGGTGTGGGCATCTGGAGTTTCCCTACTCAATTTCTaGGAGCTAAATCAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: ASRRSDGWPQGVVWASGVSLLNF*ELNQGL
Trigger: CAAACCTTGATTTAGCTCCAAGAAATTGAGTAGGGA...AACTCCAGATGCCCACACCACACCCTGGGGCCACCCATCAGACCTTCTGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS TCA 90 bp AATGTAATGTTTAATGTAAGGAACACCGAGCACACCAGGGGATGCTaGAGCTGCTGGCCTGGGGGTTCCACTTTGGGAACCACTGCTCTA +
Preference number: 5 (lower is better)
Translates to: NVMFNVRNTEHTRGC*SCWPGGSTLGTTAL
Trigger: TAGAGCAGTGGTTCCCAAAGTGGAACCCCCAGGCCAGCAGCTTCAGCATCCCCTGGTGTGCTCGGTGTTCCTTACATTAAACATTACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470226.1
CDS-3UTR CAA 90 bp ACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTTAGAGCAGATCCAGGCCTTGGGGTaGGCCAGCTGCTCTATCTTG +
Preference number: 5 (lower is better)
Translates to: TETLQNSMISRKHWTLEQIQALG*ASCSIL
Trigger: CAAGATAGAGCAGCTGGCCAACCCCAAGGCCTGGAT...CTGCTCTAACGTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAACTGTCAAGGTCAAAAGTGTaGGTCAGCAGCAGACTCACC +
Preference number: 5 (lower is better)
Translates to: HHGGMSAQTSNVVWGCKLSRSKV*VSSRLT
Trigger: GGTGAGTCTGCTGCTGACCAACACTTTTGACCTTGA...CAGTTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGATTCACCTGCTCCAGGTaGCTGGCTGTCAAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: AAFCCALCPWLIENGEWRFTCSR*LAVKKP
Trigger: TGGCTTTTTGACAGCCAGCAACCTGGAGCAGGTGAA...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp AGGGGTAACGACCTACTCACAGTGGCTCCTGACTCCTTTTCCAATGCACCAAGAAGAGAAAGGATCCCTTaGGGGGTCCCAGACAAAGAT +
Preference number: 5 (lower is better)
Translates to: RGNDLLTVAPDSFSNAPRRERIP*GVPDKD
Trigger: ATCTTTGTCTGGGACCCCCAAAGGGATCCTTTCTCT...TCTTGGTGCATTGGAAAAGGAGTCAGGAGCCACTGTGAGTAGGTCGTTACCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456124.6
CDS-3UTR CAA 90 bp CCTTCCTCTTATCTCAACTGCAAAGAGGCCTCCCTCCTTCACTATTCCTCCTCATGTCGCTCCAGCTTATaGGAGGGTGGGTGGACAAAT +
Preference number: 5 (lower is better)
Translates to: PSSYLNCKEASLLHYSSSCRSSL*EGGWTN
Trigger: ATTTGTCCACCCACCCTCCAATAAGCTGGAGCGACA...TGAGGAGGAATAGTGAAGGAGGGAGGCCTCTTTGCAGTTGAGATAAGAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS CCA 90 bp CATTCACTCGCCTCCATCTTGGTCTTCCCCCAAAAGTTTCCCATTTaGAGTCAAACCCAGTCAACAGTTCCACAGGCTGTACAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: HSLASILVFPQKFPI*SQTQSTVPQAVQEA
Trigger: TGCTTCCTGTACAGCCTGTGGAACTGTTGACTGGGTTTGACTCCAAATGGGAAACTTTTGGGGGAAGACCAAGATGGAGGCGAGTGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470226.1
CDS-3UTR CAA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATAGGGACGGCGAGATATaGAGGGTTTTCCTGTACCAG +
Preference number: 5 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDRDGEI*RVFLYQ
Trigger: CTGGTACAGGAAAACCCTCAATATCTCGCCGTCCCT...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp ATCTTTTCACTCCTGAGGCTACCTGGTATTCAAGGCTTACGCACCCTGACTGATTCTCGCTGTATTTGCTaGGGTAGGCAGATGCGAGGT +
Preference number: 5 (lower is better)
Translates to: IFSLLRLPGIQGLRTLTDSRCIC*GRQMRG
Trigger: ACCTCGCATCTGCCTACCCAAGCAAATACAGCGAGA...ATCAGTCAGGGTGCGTAAGCCTTGAATACCAGGTAGCCTCAGGAGTGAAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp TGTAGCAGGGCAACAGGTGGGAAGAAGGTCAGCAGGGAAACATGTGAGCAAAGGGGCTCAAGAGGATTCTaGAGAAATGTTCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: CSRATGGKKVSRETCEQRGSRGF*RNVLLF
Trigger: GAAGAGCAGAACATTTCTCAAGAATCCTCTTGAGCC...CCTTTGCTCACATGTTTCCCTGCTGACCTTCTTCCCACCTGTTGCCCTGCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp ACACACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAAGGATGGAATGTCCCTTaGTCGCTCCAGCTTATTGGA +
Preference number: 5 (lower is better)
Translates to: THHGGMSAQTSNVVWGCKGWNVP*SLQLIG
Trigger: TCCAATAAGCTGGAGCGACAAAGGGACATTCCATCC...TTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAAGCCAGCTGCTCTATCTaGCCAGTGGACTCGGTGCCA +
Preference number: 5 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKASCSI*PVDSVP
Trigger: TGGCACCGAGTCCACTGGCAAGATAGAGCAGCTGGC...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000353278.8
CDS-3UTR CAA 90 bp ACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTTAGAGCAGTCTCGCTGTATTTGCTaGGGTAGGCAGATGCGAGGT +
Preference number: 5 (lower is better)
Translates to: TETLQNSMISRKHWTLEQSRCIC*GRQMRG
Trigger: ACCTCGCATCTGCCTACCCAAGCAAATACAGCGAGA...CTGCTCTAACGTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp GCAGCTTTCTGCTGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAATGGCGAAGGATGCAGTTATCTTaGAGACCGGCTTTCATAGCC +
Preference number: 5 (lower is better)
Translates to: AAFCCALCPWLIENGEWRRMQLS*RPAFIA
Trigger: GGCTATGAAAGCCGGTCTCAAAGATAACTGCATCCT...TCGCCATTCTCCATTCTCGATTAACCAGGGACACAATGCACAGCAGAAAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp GCCAGCATATCTCACCTCCAGCCACAGGGCGGTTTTCTCCTATCTCAGAATAGAGTCCCAGGTGAGTGTTaGTGTCTTCAAAGATATCTG +
Preference number: 5 (lower is better)
Translates to: ASISHLQPQGGFLLSQNRVPGEC*CLQRYL
Trigger: CAGATATCTTTGAAGACACAAACACTCACCTGGGAC...TCTATTCTGAGATAGGAGAAAACCGCCCTGTGGCTGGAGGTGAGATATGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp CACCACGGAGGGATGTCTGCACAGACTTCTAATGTGGTTTGGGGTTGCAAACTGGTCCCAGGTGAGTGTTaGTGTCTTCAAAGATATCTG +
Preference number: 5 (lower is better)
Translates to: HHGGMSAQTSNVVWGCKLVPGEC*CLQRYL
Trigger: CAGATATCTTTGAAGACACAAACACTCACCTGGGAC...CAGTTTGCAACCCCAAACCACATTAGAAGTCTGTGCAGACATCCCTCCGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp AGGGGTAACGACCTACTCACAGTGGCTCCTGACTCCTTTTCCAATGCACCAAGATGGAAGATGAGATGGTaGCTGAAGACAGTAGAAGAC +
Preference number: 5 (lower is better)
Translates to: RGNDLLTVAPDSFSNAPRWKMRW*LKTVED
Trigger: GTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA...TCTTGGTGCATTGGAAAAGGAGTCAGGAGCCACTGTGAGTAGGTCGTTACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456124.6
CDS-3UTR CAA 90 bp ACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTTAGAGCAGGTGCTGTGTTTGCCATaGAGTGTGCCGGCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: TETLQNSMISRKHWTLEQVLCLP*SVPALQ
Trigger: TTGAAGAGCCGGCACACTCAATGGCAAACACAGCAC...CTGCTCTAACGTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAATGGGGCCTCTCAGATTaGGCTGCACATCGGATCACC +
Preference number: 5 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKWGLSD*AAHRIT
Trigger: GGTGATCCGATGTGCAGCCAAATCTGAGAGGCCCCA...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp GGTGTGGGCATCTGGAGTTTTAAATGCTCCCAGGTGGTTGGAATGCGCTGCAAGTGGTGCTTCATCTGTTaGAGTTCCATGAGCAAAAAC +
Preference number: 5 (lower is better)
Translates to: GVGIWSFKCSQVVGMRCKWCFIC*SSMSKN
Trigger: GTTTTTGCTCATGGAACTCAAACAGATGAAGCACCA...CTTGCAGCGCATTCCAACCACCTGGGAGCATTTAAAACTCCAGATGCCCACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp ACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTTAGAGCAGGCCAGCTGCTCTATCTaGGGAGTGAACATGTACATG +
Preference number: 5 (lower is better)
Translates to: TETLQNSMISRKHWTLEQASCSI*GVNMYM
Trigger: CATGTACATGTTCACTCCCAAGATAGAGCAGCTGGC...CTGCTCTAACGTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp ACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTTAGAGCAGTCAAGGTCAAAAGTGTaGGTCAGCAGCAGACTCACC +
Preference number: 5 (lower is better)
Translates to: TETLQNSMISRKHWTLEQSRSKV*VSSRLT
Trigger: GGTGAGTCTGCTGCTGACCAACACTTTTGACCTTGA...CTGCTCTAACGTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CAGTGGTGCTTCATCTGTTTGAGTTCCATGAGCAAAAACTATTCCGTAGAAGTAAATGCTCCCAGGTGGTaGGAATGCGCTGCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: QWCFICLSSMSKNYSVEVNAPRW*ECAARW
Trigger: CCACCTTGCAGCGCATTCCAACCACCTGGGAGCATT...TACTTCTACGGAATAGTTTTTGCTCATGGAACTCAAACAGATGAAGCACCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGATGGAGGTGAAGCTGTaGATGAGGGACACGATGATG +
Preference number: 5 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVMEVKL*MRDTMM
Trigger: CATCATCGTGTCCCTCATCAACAGCTTCACCTCCAT...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp CACAGACACAGTAACAATCTGATCTTTCTTTTCCCCACATGGACTAATGCGATAATGGAGGTGAAGCTGTaGATGAGGGACACGATGATG +
Preference number: 5 (lower is better)
Translates to: HRHSNNLIFLFPTWTNAIMEVKL*MRDTMM
Trigger: CATCATCGTGTCCCTCATCAACAGCTTCACCTCCAT...TATCGCATTAGTCCATGTGGGGAAAAGAAAGATCAGATTGTTACTGTGTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACATGGAGGTGAAGCTGTaGATGAGGGACACGATGATG +
Preference number: 5 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDMEVKL*MRDTMM
Trigger: CATCATCGTGTCCCTCATCAACAGCTTCACCTCCAT...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTTCACCTGCTCCAGGTaGCTGGCTGTCAAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFFTCSR*LAVKKP
Trigger: TGGCTTTTTGACAGCCAGCAACCTGGAGCAGGTGAA...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CCTTCCTCTTATCTCAACTGCAAAGAGGCCTCCCTCCTTCACTATTCCTCCTCATTGTCCTCTAATATTTaGGTGTCTCTTCAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: PSSYLNCKEASLLHYSSSLSSNI*VSLQPK
Trigger: TTTTGGCTGAAGAGACACCAAAATATTAGAGGACAA...TGAGGAGGAATAGTGAAGGAGGGAGGCCTCTTTGCAGTTGAGATAAGAGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp TTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTGCTGTAAGAGAATTAGTGATCCACCCACCTaGACCCCCAAGGTGCTAGGA +
Preference number: 5 (lower is better)
Translates to: LLKTVEDLSKAYFCCKRISDPPT*TPKVLG
Trigger: TCCTAGCACCTTGGGGGTCAAGGTGGGTGGATCACT...AATTCTCTTACAGCAAAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp TTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTGCTGTAAGAGAATTAATACCCAGGCTTTCTaGGGCAGAGGTCCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LLKTVEDLSKAYFCCKRINTQAF*GRGPCS
Trigger: GCTGCAGGGACCTCTGCCCAAGAAAGCCTGGGTATT...AATTCTCTTACAGCAAAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp TTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTTGCTGTAAGAGAATTGTGAAATACACCACCTaGCCAGTGGACTCGGTGCCA +
Preference number: 5 (lower is better)
Translates to: LLKTVEDLSKAYFCCKRIVKYTT*PVDSVP
Trigger: TGGCACCGAGTCCACTGGCAAGGTGGTGTATTTCAC...AATTCTCTTACAGCAAAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CACAGACACAGTAACAATCTGATCTTTCTTTTCCCCACATGGACTAATGCGATAGTGGTATTTGTGGTCTaGATAGAGTTGGCCACGATG +
Preference number: 5 (lower is better)
Translates to: HRHSNNLIFLFPTWTNAIVVFVV*IELATM
Trigger: CATCGTGGCCAACTCTATCAAGACCACAAATACCAC...TATCGCATTAGTCCATGTGGGGAAAAGAAAGATCAGATTGTTACTGTGTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTGCTGCAGTTTTTGATTaGCGGGAACATCTCGCTGTA +
Preference number: 5 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFAAVFD*REHLAV
Trigger: TACAGCGAGATGTTCCCGCAAATCAAAAACTGCAGC...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp TGGAAGATGAGATGGTTGCTGAAGACAGTAGAAGACCTTTCTAAAGCCTATTTTGTGGTCTTGATAGAGTaGGCCACGATGTCCAAATGT +
Preference number: 5 (lower is better)
Translates to: WKMRWLLKTVEDLSKAYFVVLIE*ATMSKC
Trigger: ACATTTGGACATCGTGGCCAACTCTATCAAGACCAC...AAAATAGGCTTTAGAAAGGTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACGTCCCAGGTGAGTGTTaGTGTCTTCAAAGATATCTG +
Preference number: 5 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDVPGEC*CLQRYL
Trigger: CAGATATCTTTGAAGACACAAACACTCACCTGGGAC...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp CACAGACACAGTAACAATCTGATCTTTCTTTTCCCCACATGGACTAATGCGATATGGAAGATGAGATGGTaGCTGAAGACAGTAGAAGAC +
Preference number: 5 (lower is better)
Translates to: HRHSNNLIFLFPTWTNAIWKMRW*LKTVED
Trigger: GTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA...TATCGCATTAGTCCATGTGGGGAAAAGAAAGATCAGATTGTTACTGTGTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp AAATATATCCACAGAAACTCTCCAGAATTCCATGATCTCAAGGAAGCACTGGACTGGAAGATGAGATGGTaGCTGAAGACAGTAGAAGAC +
Preference number: 5 (lower is better)
Translates to: KYIHRNSPEFHDLKEALDWKMRW*LKTVED
Trigger: GTCTTCTACTGTCTTCAGCAACCATCTCATCTTCCA...GTCCAGTGCTTCCTTGAGATCATGGAATTCTGGAGAGTTTCTGTGGATATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
CDS-3UTR CAA 90 bp AAAATAAAAAGACATCTCCGGCCAACGTCCCAGGTGAGTGTTTGTGTCTTCAAATCCCTACTCAATTTCTaGGAGCTAAATCAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: KIKRHLRPTSQVSVCVFKSLLNF*ELNQGL
Trigger: CAAACCTTGATTTAGCTCCAAGAAATTGAGTAGGGA...TTTGAAGACACAAACACTCACCTGGGACGTTGGCCGGAGATGTCTTTTTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS-3UTR CAA 90 bp TTTGAAAAAGCAGCCGAGGAGTTTCCGCCTGTAAATAGTATCTGTAAAACCGTGTTGTCCTCTAATATTTaGGTGTCTCTTCAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: FEKAAEEFPPVNSICKTVLSSNI*VSLQPK
Trigger: TTTTGGCTGAAGAGACACCAAAATATTAGAGGACAA...CACGGTTTTACAGATACTATTTACAGGCGGAAACTCCTCGGCTGCTTTTTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353278.8
ENST00000358525.9
CDS CAA 90 bp AGGCCCACGGCGTACGAGATGCAGGCGAACACGAACTGTAGCGAGTaGGCCCACAGCGGCCGCGCTTTCTCCATGGCCCCGGCCTCGGCG +
Preference number: 6 (lower is better)
Translates to: RPTAYEMQANTNCSE*AHSGRAFSMAPASA
Trigger: CGCCGAGGCCGGGGCCATGGAGAAAGCGCGGCCGCTGTGGGCCAACTCGCTACAGTTCGTGTTCGCCTGCATCTCGTACGCCGTGGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000413781.1
ENST00000456124.6
CDS CCA 72 bp CGTACGAGATGCAGGCGAACACGAACTGTAGCGAGTTaGCCCACAGCGGCCGCGCTTTCTCCATGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: RTRCRRTRTVAS*PTAAALSPWPR
Trigger: CCGGGGCCATGGAGAAAGCGCGGCCGCTGTGGGCCAACTCGCTACAGTTCGTGTTCGCCTGCATCTCGTACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000413781.1
ENST00000456124.6
CDS CAA 72 bp GCGTACGAGATGCAGGCGAACACGAACTGTAGCGAGTaGGCCCACAGCGGCCGCGCTTTCTCCATGGCCCCG +
Preference number: 6 (lower is better)
Translates to: AYEMQANTNCSE*AHSGRAFSMAP
Trigger: CGGGGCCATGGAGAAAGCGCGGCCGCTGTGGGCCAACTCGCTACAGTTCGTGTTCGCCTGCATCTCGTACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000413781.1
ENST00000456124.6
CDS GCA 72 bp GGTTGGCCAGCTGCTCTATCTTGCCAGTGGACTCGGTaGCACGCAGGATGCACAGGTACACCACCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: GWPAALSCQWTR*HAGCTGTPPAR
Trigger: CCTGGCTGGTGGTGTACCTGTGCATCCTGCGTGGCACCGAGTCCACTGGCAAGATAGAGCAGCTGGCCAACC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353278.8
CDS CCA 72 bp CACAGCGCCGGCTCCCACTGCACACCCCCGTTCTCCTaGAGGGACGGCGAGATATTGAGGGTTTTCCTGTAC +
Preference number: 6 (lower is better)
Translates to: HSAGSHCTPPFS*RDGEILRVFLY
Trigger: GTACAGGAAAACCCTCAATATCTCGCCGTCCCTCCAGGAGAACGGGGGTGTGCAGTGGGAGCCGGCGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000413781.1
ENST00000456124.6
CDS CCA 72 bp TTGATCCAGGCCTTGGGGTTGGCCAGCTGCTCTATCTaGAAGGCCAGCAGGGACAGGGCTGATGATCCCTGG +
Preference number: 6 (lower is better)
Translates to: LIQALGLASCSI*KASRDRADDPW
Trigger: CCAGGGATCATCAGCCCTGTCCCTGCTGGCCTTCCAGATAGAGCAGCTGGCCAACCCCAAGGCCTGGATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473146.5
CDS CAA 72 bp TTTGGTCACGAGCTGGCCCTGGGAGGCGTCCCAGGCTaGATACTTCAGGGTCCCCGTGAGGATGTAGTCGCT +
Preference number: 6 (lower is better)
Translates to: FGHELALGGVPG*ILQGPREDVVA
Trigger: AGCGACTACATCCTCACGGGGACCCTGAAGTATCAAGCCTGGGACGCCTCCCAGGGCCAGCTCGTGACCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000473146.5
CDS GCA 72 bp GGGACAGGGCTGATGATCCCTGGGTGGAATCCCAAATaGTCAGACCCGCAACAGGAGAGTAGCCCAGAGAGG +
Preference number: 6 (lower is better)
Translates to: GTGLMIPGWNPK*SDPQQESSPER
Trigger: CCTCTCTGGGCTACTCTCCTGTTGCGGGTCTGAGCATTTGGGATTCCACCCAGGGATCATCAGCCCTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473146.5
CDS CCA 72 bp AGGCACACCAGACCTGAGATGGCCTCCTTGGGCAGGTaGCTGGAGATGATCTTGCTGTCTGTCAGAGGGGTG +
Preference number: 6 (lower is better)
Translates to: RHTRPEMASLGR*LEMILLSVRGV
Trigger: CACCCCTCTGACAGACAGCAAGATCATCTCCAGCCACCTGCCCAAGGAGGCCATCTCAGGTCTGGTGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
ENST00000473146.5
ENST00000493980.1
CDS CCA 72 bp CACCGAGCACACCAGGGGATGCTGAAGCTGCTGGCCTaGGGGTTCCACTTTGGGAACCACTGCTCTATTCTG +
Preference number: 6 (lower is better)
Translates to: HRAHQGMLKLLA*GFHFGNHCSIL
Trigger: CAGAATAGAGCAGTGGTTCCCAAAGTGGAACCCCCAGGCCAGCAGCTTCAGCATCCCCTGGTGTGCTCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470226.1
CDS CCA 72 bp GGAAGGCCAGCAGGGACAGGGCTGATGATCCCTGGGTaGAATCCCAAATGCTCAGACCCGCAACAGGAGAGT +
Preference number: 6 (lower is better)
Translates to: GRPAGTGLMIPG*NPKCSDPQQES
Trigger: ACTCTCCTGTTGCGGGTCTGAGCATTTGGGATTCCACCCAGGGATCATCAGCCCTGTCCCTGCTGGCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473146.5
CDS CAA 72 bp AAGATCTGGGTGGCTGCATTGATCCAGGCCTTGGGGTaGGCCAGCTGCTCTATCTGGAAGGCCAGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: KIWVAALIQALG*ASCSIWKASRD
Trigger: GTCCCTGCTGGCCTTCCAGATAGAGCAGCTGGCCAACCCCAAGGCCTGGATCAATGCAGCCACCCAGATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473146.5
CDS CAA 90 bp GGCTCCCACTGCACACCCCCGTTCTCCTGGAGGGACGGCGAGATATaGAGGGTTTTCCTGTACCAGAAGTACTGTGTGGAGGACGCCTTC +
Preference number: 6 (lower is better)
Translates to: GSHCTPPFSWRDGEI*RVFLYQKYCVEDAF
Trigger: GAAGGCGTCCTCCACACAGTACTTCTGGTACAGGAAAACCCTCAATATCTCGCCGTCCCTCCAGGAGAACGGGGGTGTGCAGTGGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000413781.1
ENST00000456124.6
CDS CCA 72 bp ACACTCCTCATCGTAGCCCGTGTGGTTACCATTCAGTaGGCAGACAGACCACGGCAGGGGATCCTGGAAGGA +
Preference number: 6 (lower is better)
Translates to: TLLIVARVVTIQ*ADRPRQGILEG
Trigger: TCCTTCCAGGATCCCCTGCCGTGGTCTGTCTGCCCACTGAATGGTAACCACACGGGCTACGATGAGGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000413781.1
ENST00000456124.6
CDS CCA 72 bp CCGCCTGTAAATAGTATCTGTAAAACCGTGAGCGGCTaGGAAGCCCACATCTCAGGCCACGGGGTCTGCGTC +
Preference number: 6 (lower is better)
Translates to: PPVNSICKTVSG*EAHISGHGVCV
Trigger: GACGCAGACCCCGTGGCCTGAGATGTGGGCTTCCCAGCCGCTCACGGTTTTACAGATACTATTTACAGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000473146.5
CDS CCA 72 bp ATCTGGAAGGCCAGCAGGGACAGGGCTGATGATCCCTaGGTGGAATCCCAAATGCTCAGACCCGCAACAGGA +
Preference number: 6 (lower is better)
Translates to: IWKASRDRADDP*VESQMLRPATG
Trigger: TCCTGTTGCGGGTCTGAGCATTTGGGATTCCACCCAGGGATCATCAGCCCTGTCCCTGCTGGCCTTCCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473146.5
CDS CAA 72 bp AAGATCTGGGTGGCTGCATTGATCCAGGCCTTGGGGTaGGCCAGCTGCTCTATCTTGCCAGTGGACTCGGTG +
Preference number: 6 (lower is better)
Translates to: KIWVAALIQALG*ASCSILPVDSV
Trigger: CACCGAGTCCACTGGCAAGATAGAGCAGCTGGCCAACCCCAAGGCCTGGATCAATGCAGCCACCCAGATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353278.8
CDS TCA 72 bp TTTAATGTAAGGAACACCGAGCACACCAGGGGATGCTaGAGCTGCTGGCCTGGGGGTTCCACTTTGGGAACC +
Preference number: 6 (lower is better)
Translates to: FNVRNTEHTRGC*SCWPGGSTLGT
Trigger: GGTTCCCAAAGTGGAACCCCCAGGCCAGCAGCTTCAGCATCCCCTGGTGTGCTCGGTGTTCCTTACATTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470226.1
CDS CAA 72 bp TGCACACCCCCGTTCTCCTGGAGGGACGGCGAGATATaGAGGGTTTTCCTGTACCAGAAGTACTGTGTGGAG +
Preference number: 6 (lower is better)
Translates to: CTPPFSWRDGEI*RVFLYQKYCVE
Trigger: CTCCACACAGTACTTCTGGTACAGGAAAACCCTCAATATCTCGCCGTCCCTCCAGGAGAACGGGGGTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000413781.1
ENST00000456124.6
CDS TCA 72 bp CCTGATGAGGTAGATGATGAGCACGCAATAGGGCAGTaGCGCCGTGAAATACACCACCTTGCCAGTGGACTC +
Preference number: 6 (lower is better)
Translates to: PDEVDDEHAIGQ*RREIHHLASGL
Trigger: GAGTCCACTGGCAAGGTGGTGTATTTCACGGCGTCACTGCCCTATTGCGTGCTCATCATCTACCTCATCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358525.9
ENST00000413781.1
ENST00000456124.6
CDS GCA 72 bp CACCTCCCAGGGCTAAGGTGCTGTGGAGAATACAGGTaGTATGTGGAGGACATAAGGTGCTACGTATCCTCC +
Preference number: 6 (lower is better)
Translates to: HLPGLRCCGEYR*YVEDIRCYVSS
Trigger: GGAGGATACGTAGCACCTTATGTCCTCCACATAGCACCTGTATTCTCCACAGCACCTTAGCCCTGGGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473146.5
CDS GCA 72 bp ATCCACTCCCTGGCAGATGAAACACACACCTCAAGCTaGACACCTCCCAGGGCTAAGGTGCTGTGGAGAATA +
Preference number: 6 (lower is better)
Translates to: IHSLADETHTSS*TPPRAKVLWRI
Trigger: TATTCTCCACAGCACCTTAGCCCTGGGAGGTGTGCAGCTTGAGGTGTGTGTTTCATCTGCCAGGGAGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473146.5
CDS TCA 72 bp GGGAGGCCTCAGGAAACTTGCAATTTTGGAAGAAGGTaGAGGGGAAGTAGGCACGTCTTACATGACTCCGCC +
Preference number: 6 (lower is better)
Translates to: GRPQETCNFGRR*RGSRHVLHDSA
Trigger: GGCGGAGTCATGTAAGACGTGCCTACTTCCCCTTCACCTTCTTCCAAAATTGCAAGTTTCCTGAGGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470226.1
CDS TCA 72 bp CGGCCGTGTCTAGCTCCGATTCCAAGCTGCAGTTTTTaGTTTGCGGGAACATCTCGCTGTATTTGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: RPCLAPIPSCSF*FAGTSRCICLG
Trigger: ACCCAAGCAAATACAGCGAGATGTTCCCGCAAATCAAAAACTGCAGCTTGGAATCGGAGCTAGACACGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
ENST00000473146.5
CDS CCA 72 bp CAGATGCGAGGTAGCCCTTCACCTGCTCCAGGTTGCTaGCTGTCAAAAAGCCATCTTCAAGGTCAAAAGTGT +
Preference number: 6 (lower is better)
Translates to: QMRGSPSPAPGC*LSKSHLQGQKC
Trigger: ACACTTTTGACCTTGAAGATGGCTTTTTGACAGCCAGCAACCTGGAGCAGGTGAAGGGCTACCTCGCATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
ENST00000473146.5
CDS CCA 72 bp GTTTTTGATTTGCGGGAACATCTCGCTGTATTTGCTTaGGTAGGCAGATGCGAGGTAGCCCTTCACCTGCTC +
Preference number: 6 (lower is better)
Translates to: VFDLREHLAVFA*VGRCEVALHLL
Trigger: GAGCAGGTGAAGGGCTACCTCGCATCTGCCTACCCAAGCAAATACAGCGAGATGTTCCCGCAAATCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
ENST00000473146.5
CDS CAA 72 bp ACGGCCGTGTCTAGCTCCGATTCCAAGCTGCAGTTTTaGATTTGCGGGAACATCTCGCTGTATTTGCTTGGG +
Preference number: 6 (lower is better)
Translates to: TAVSSSDSKLQF*ICGNISLYLLG
Trigger: CCCAAGCAAATACAGCGAGATGTTCCCGCAAATCAAAAACTGCAGCTTGGAATCGGAGCTAGACACGGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353278.8
ENST00000358525.9
ENST00000456124.6
ENST00000473146.5
CDS CAA 90 bp TCATTCACTCGCCTCCATCTTGGTCTTCCCCCAAAAGTTTCCCATTaGGAGTCAAACCCAGTCAACAGTTCCACAGGCTGTACAGGAAGC +
Preference number: 6 (lower is better)
Translates to: SFTRLHLGLPPKVSH*ESNPVNSSTGCTGS
Trigger: GCTTCCTGTACAGCCTGTGGAACTGTTGACTGGGTTTGACTCCAAATGGGAAACTTTTGGGGGAAGACCAAGATGGAGGCGAGTGAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470226.1
CDS CCA 72 bp GCCTCCATCTTGGTCTTCCCCCAAAAGTTTCCCATTTaGAGTCAAACCCAGTCAACAGTTCCACAGGCTGTA +
Preference number: 6 (lower is better)
Translates to: ASILVFPQKFPI*SQTQSTVPQAV
Trigger: TACAGCCTGTGGAACTGTTGACTGGGTTTGACTCCAAATGGGAAACTTTTGGGGGAAGACCAAGATGGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470226.1
CDS CCA 72 bp AGCGCCTTCCTTCTCTTCATTCACTCGCCTCCATCTTaGTCTTCCCCCAAAAGTTTCCCATTTGGAGTCAAA +
Preference number: 6 (lower is better)
Translates to: SAFLLFIHSPPS*SSPKSFPFGVK
Trigger: TTTGACTCCAAATGGGAAACTTTTGGGGGAAGACCAAGATGGAGGCGAGTGAATGAAGAGAAGGAAGGCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470226.1
CDS CAA 90 bp CACAGTCATTTTATTTCTAGGGACTGCATTTGCCAAATGAAGAACTaGCCCCATCCCAAAGGCAAGAGTGCACCCTCCATGGATGAACCC +
Preference number: 6 (lower is better)
Translates to: HSHFISRDCICQMKN*PHPKGKSAPSMDEP
Trigger: GGGTTCATCCATGGAGGGTGCACTCTTGCCTTTGGGATGGGGCAAGTTCTTCATTTGGCAAATGCAGTCCCTAGAAATAAAATGACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473146.5
CDS GCA 72 bp CAGCTATGCTCACCACTATACGCCAGTGCGGAGGTGTaGAATGGAATACTGCAGGGTAAAATAATTAAAACA +
Preference number: 6 (lower is better)
Translates to: QLCSPLYASAEV*NGILQGKIIKT
Trigger: TGTTTTAATTATTTTACCCTGCAGTATTCCATTGCACACCTCCGCACTGGCGTATAGTGGTGAGCATAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473146.5