Pregenerated sensors for SLC5A4 (Homo sapiens)

Ensembl gene IDs: ENSG00000100191

Ensembl transcript IDs: ENST00000266086.6

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GATGTCAGCAGCATTTCGGATGTGGTCAGACAATGGAGGTGGCTCTaGGGTCTCAGCTATGGTGCTGGGGCTAACCGTACTGGCCATGGC	+
Preference number: 5 (lower is better) Translates to: DVSSISDVVRQWRWL*GLSYGAGANRTGHG Trigger: GCCATGGCCAGTACGGTTAGCCCCAGCACCATAGCTGAGACCCCAGAGCCACCTCCATTGTCTGACCACATCCGAAATGCTGCTGACATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000266086.6
CDS GCA 90 bp	TTAGTTGTCCATTTTGAGAAACTTGTACCAGTGGGACCCACACAATaGTCACAACAGTTAATAGAAGAACAAATATCCGTCCAGCTATCA	+
Preference number: 5 (lower is better) Translates to: LVVHFEKLVPVGPTQ*SQQLIEEQISVQLS Trigger: TGATAGCTGGACGGATATTTGTTCTTCTATTAACTGTTGTGAGCATTGTGTGGGTCCCACTGGTACAAGTTTCTCAAAATGGACAACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000266086.6
CDS CAA 72 bp	CGACCAGCGAGGAAGAAGCCTCCTATAGTACCTCGGTaGGTCTTCAGCATCGCCCACAGCCCAACAGCCATC	+
Preference number: 6 (lower is better) Translates to: RPARKKPPIVPR*VFSIAHSPTAI Trigger: GATGGCTGTTGGGCTGTGGGCGATGCTGAAGACCAACCGAGGTACTATAGGAGGCTTCTTCCTCGCTGGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000266086.6
CDS CCA 72 bp	AGCATTTCGGATGTGGTCAGACAATGGAGGTGGCTCTaGGGTCTCAGCTATGGTGCTGGGGCTAACCGTACT	+
Preference number: 6 (lower is better) Translates to: SISDVVRQWRWL*GLSYGAGANRT Trigger: AGTACGGTTAGCCCCAGCACCATAGCTGAGACCCCAGAGCCACCTCCATTGTCTGACCACATCCGAAATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000266086.6
CDS GCA 72 bp	TCAGTTCCAGCACCATCGTGGGGTATGCGTAGTTGGTaGAGCCAACATCAACGCCACAGTGTTTCACGCATT	+
Preference number: 6 (lower is better) Translates to: SVPAPSWGMRSW*SQHQRHSVSRI Trigger: AATGCGTGAAACACTGTGGCGTTGATGTTGGCTGCACCAACTACGCATACCCCACGATGGTGCTGGAACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000266086.6