RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC39A10 (Homo sapiens)

Ensembl gene IDs: ENSG00000196950

Ensembl transcript IDs: ENST00000359634.10, ENST00000409086.7, ENST00000412905.1, ENST00000418005.1, ENST00000430412.5, ENST00000444421.5, ENST00000458054.1, ENST00000464301.1, ENST00000465851.1

Found 416 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAAAACTTGTTAGATTCATGTCCATGAGAATGTCCATGCCCATGTaGATGTTGGTGACTGTGATCATGTCCACCCTGAGAATGGGGCAG +
Preference number: 1 (lower is better)
Translates to: QKLVRFMSMRMSMPM*MLVTVIMSTLRMGQ
Trigger: CTGCCCCATTCTCAGGGTGGACATGATCACAGTCACCAACATGCACATGGGCATGGACATTCTCATGGACATGAATCTAACAAGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR GCA 90 bp CATTTCTGGAAGCATATCCACCAAGGCTACATAGAGGAACATGCCTaGAGTGACTGCAAAGATCCAAAGTGTGATGTTATTGGCATACTG +
Preference number: 1 (lower is better)
Translates to: HFWKHIHQGYIEEHA*SDCKDPKCDVIGIL
Trigger: CAGTATGCCAATAACATCACACTTTGGATCTTTGCAGTCACTGCAGGCATGTTCCTCTATGTAGCCTTGGTGGATATGCTTCCAGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR TCA 90 bp GTGGTTAGGCTCAAATCTATGAAACTTGTAAGTAGTGCAAGCCACTaGCTTTCCTTTGAGCAATGTGCATACAGTACAAGGAACAGATGC +
Preference number: 1 (lower is better)
Translates to: VVRLKSMKLVSSASH*LSFEQCAYSTRNRC
Trigger: GCATCTGTTCCTTGTACTGTATGCACATTGCTCAAAGGAAAGTCAGTGGCTTGCACTACTTACAAGTTTCATAGATTTGAGCCTAACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR TCA 90 bp TCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAAGTaGTTTCAGCTGAGTAATTTAAATGCATCTTCCAAGTCACTTGGG +
Preference number: 1 (lower is better)
Translates to: SLSGTNSISWHKMIK*FQLSNLNASSKSLG
Trigger: CCCAAGTGACTTGGAAGATGCATTTAAATTACTCAGCTGAAATCACTTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR TCA 90 bp GCAATCACCAGCATAATGGCAAATCCAAAGAGCAATCCTAAATTCTaGAGGATGAATTGCCCCACAGGACAAAAGCCATGTTCTTCATTG +
Preference number: 1 (lower is better)
Translates to: AITSIMANPKSNPKF*RMNCPTGQKPCSSL
Trigger: CAATGAAGAACATGGCTTTTGTCCTGTGGGGCAATTCATCCTTCAGAATTTAGGATTGCTCTTTGGATTTGCCATTATGCTGGTGATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR GCA 90 bp CATGCCTATGTAAGCCATCATGGCAGAGAGGAGGTTGTATACAATTaGTTGCTTTACAGTCATGCCTGCTTTAAGAAGAACTGCAAAATC +
Preference number: 1 (lower is better)
Translates to: HAYVSHHGREEVVYN*LLYSHACFKKNCKI
Trigger: GATTTTGCAGTTCTTCTTAAAGCAGGCATGACTGTAAAGCAAGCAATTGTATACAACCTCCTCTCTGCCATGATGGCTTACATAGGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR TCA 90 bp CACGACATGTGCTCTTGGTTCCAGTGCCAAACTGGTAAAGCAATGTaGACATTCAGAACTTACATTTCCCAATTAACTAGTTGGTACTGT +
Preference number: 1 (lower is better)
Translates to: HDMCSWFQCQTGKAM*TFRTYISQLTSWYC
Trigger: ACAGTACCAACTAGTTAATTGGGAAATGTAAGTTCTGAATGTTCACATTGCTTTACCAGTTTGGCACTGGAACCAAGAGCACATGTCGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR CCA 90 bp GATGCAAAGCTGCATGGTAACATTCTCGTAATCAACAGTGATTACTaGGAAAGGTCAAAACTGGATGTCAAACACAATTTTATCTTCATA +
Preference number: 1 (lower is better)
Translates to: DAKLHGNILVINSDY*ERSKLDVKHNFIFI
Trigger: TATGAAGATAAAATTGTGTTTGACATCCAGTTTTGACCTTTCCCAGTAATCACTGTTGATTACGAGAATGTTACCATGCAGCTTTGCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR CCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATCACGACATGTGCTCTTaGTTCCAGTGCCAAACTGGT +
Preference number: 2 (lower is better)
Translates to: APKRLIPIRHQQHILAQDHDMCS*FQCQTG
Trigger: ACCAGTTTGGCACTGGAACCAAGAGCACATGTCGTG...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CCA 90 bp CCAGGCTATATTAGCTATTCCTGTTTCTTTCAGATCGGATCCAGAATGACAGGGGTTTTGTTCTCGCCGTaGTGGTTATGTGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: PGYISYSCFFQIGSRMTGVLFSP*WLCAAA
Trigger: TGCTGCTGCACATAACCACCACGGCGAGAACAAAAC...CCCTGTCATTCTGGATCCGATCTGAAAGAAACAGGAATAGCTAATATAGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR GCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGCCAGCCACGACATGTaGTCTTGGTTCCAGTGCCAA +
Preference number: 2 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNASHDM*SWFQCQ
Trigger: TTGGCACTGGAACCAAGAGCACATGTCGTGGCTGGC...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATTTGTTCTCGCCGTGGTaGTTATGTGCAGCAGCATGG +
Preference number: 2 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNLFSPW*LCAAAW
Trigger: CCATGCTGCTGCACATAACCACCACGGCGAGAACAA...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR TCA 90 bp CATGGTAAACTTCGATTTTCTGCTTTACAACCTTGTAGCCAGCCACGACATGTGCCACTGACTTTCCTTTaGGCAATGTGCATACAGTAC +
Preference number: 2 (lower is better)
Translates to: HGKLRFSALQPCSQPRHVPLTFL*AMCIQY
Trigger: GTACTGTATGCACATTGCTCAAAGGAAAGTCAGTGG...CACATGTCGTGGCTGGCTACAAGGTTGTAAAGCAGAAAATCGAAGTTTACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR TCA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTCCACTGACTTTCCTTTaGGCAATGTGCATACAGTAC +
Preference number: 2 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVPLTFL*AMCIQY
Trigger: GTACTGTATGCACATTGCTCAAAGGAAAGTCAGTGG...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR TCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATAGTAGTGCAAGCCACTaGCTTTCCTTTGAGCAATGT +
Preference number: 2 (lower is better)
Translates to: APKRLIPIRHQQHILAQDSSASH*LSFEQC
Trigger: ACATTGCTCAAAGGAAAGTCAGTGGCTTGCACTACT...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR CAA 90 bp GCCTATGTAAGCCATCATGGCAGAGAGGAGGTTGTATACAATTGCTaGCTTTACAGTCATGCCTGCTTTAAGAAGAACTGCAAAATCTCC +
Preference number: 2 (lower is better)
Translates to: AYVSHHGREEVVYNC*LYSHACFKKNCKIS
Trigger: GGAGATTTTGCAGTTCTTCTTAAAGCAGGCATGACTGTAAAGCAAGCAATTGTATACAACCTCCTCTCTGCCATGATGGCTTACATAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR TCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATTTTACCTGGCATAAATaGAGACCATGTGGCATAGGA +
Preference number: 2 (lower is better)
Translates to: APKRLIPIRHQQHILAQDFTWHK*RPCGIG
Trigger: TCCTATGCCACATGGTCTTCATTTATGCCAGGTAAA...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR TCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATATGGATGTCACACAGTaGCAGCATTGTACAAGTAAC +
Preference number: 2 (lower is better)
Translates to: APKRLIPIRHQQHILAQDMDVTQ*QHCTSN
Trigger: GTTACTTGTACAATGCTGTCACTGTGTGACATCCAT...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR TCA 90 bp CATGGTAAACTTCGATTTTCTGCTTTACAACCTTGTAGCCAGCCACGACATGTGTTAGATTCATGTCCATaGGAATGTCCATGCCCATGT +
Preference number: 2 (lower is better)
Translates to: HGKLRFSALQPCSQPRHVLDSCP*ECPCPC
Trigger: ACATGGGCATGGACATTCTCATGGACATGAATCTAA...CACATGTCGTGGCTGGCTACAAGGTTGTAAAGCAGAAAATCGAAGTTTACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR TCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGTTGTGGTGCCACTGGTaGTTATGCTTCCTCAGCACA +
Preference number: 2 (lower is better)
Translates to: TLAIIYKYLDACAALKVLLWCHW*LCFLST
Trigger: TGTGCTGAGGAAGCATAATCACCAGTGGCACCACAA...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR CCA 90 bp CATGGTAAACTTCGATTTTCTGCTTTACAACCTTGTAGCCAGCCACGACATGTGTTGAGATGGGAGAGTTaGCACCATGACCATAGTATT +
Preference number: 2 (lower is better)
Translates to: HGKLRFSALQPCSQPRHVLRWES*HHDHSI
Trigger: AATACTATGGTCATGGTGCCAACTCTCCCATCTCAA...CACATGTCGTGGCTGGCTACAAGGTTGTAAAGCAGAAAATCGAAGTTTACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR CCA 90 bp CATGGTAAACTTCGATTTTCTGCTTTACAACCTTGTAGCCAGCCACGACATGTGATAAATCAGTTGAGATaGGAGAGTTGGCACCATGAC +
Preference number: 2 (lower is better)
Translates to: HGKLRFSALQPCSQPRHVINQLR*ESWHHD
Trigger: GTCATGGTGCCAACTCTCCCATCTCAACTGATTTAT...CACATGTCGTGGCTGGCTACAAGGTTGTAAAGCAGAAAATCGAAGTTTACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR TCA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTAAAGTTGTGTCAAGTTaGTCCCTATCACCACATGAA +
Preference number: 2 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVKVVSS*SLSPHE
Trigger: TTCATGTGGTGATAGGGATCAACTTGACACAACTTT...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR TCA 90 bp TCAAAACTGGATGTCAAACACAATTTTATCTTCATAGAGGGCAATCACCAGCATCAACAGCTGTGCCTATaGGCATGCCTATGTAAGCCA +
Preference number: 2 (lower is better)
Translates to: SKLDVKHNFIFIEGNHQHQQLCL*ACLCKP
Trigger: TGGCTTACATAGGCATGCTCATAGGCACAGCTGTTG...ATGCTGGTGATTGCCCTCTATGAAGATAAAATTGTGTTTGACATCCAGTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR GCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATTGCTCTTGGTTCCAGTaGCAAACTGGTAAAGCAATG +
Preference number: 2 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNCSWFQ*QTGKAM
Trigger: CATTGCTTTACCAGTTTGGCACTGGAACCAAGAGCA...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATTTACAGCAGCTACACTaGTTGCCAAGCAGATTAAAA +
Preference number: 2 (lower is better)
Translates to: APKRLIPIRHQQHILAQDLQQLH*LPSRLK
Trigger: TTTTAATCTGCTTGGCAACCAGTGTAGCTGCTGTAA...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CCA 90 bp ATCACGCCTAGCAAGGAAAGCAGGCTAATGACAGTGATAGAAATGATACCACAAATAAATCAGTTGAGATaGGAGAGTTGGCACCATGAC +
Preference number: 2 (lower is better)
Translates to: ITPSKESRLMTVIEMIPQINQLR*ESWHHD
Trigger: GTCATGGTGCCAACTCTCCCATCTCAACTGATTTAT...TTGTGGTATCATTTCTATCACTGTCATTAGCCTGCTTTCCTTGCTAGGCGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430412.5
ENST00000444421.5
3UTR CAA 90 bp CTCATTGTTCCTACAGCTAATGCAACAAGGAATGTAAGAAGGAATTaGAAGCATCCTTGGTTAATGATAGGAACCAAGATCACGCCTAGC +
Preference number: 2 (lower is better)
Translates to: LIVPTANATRNVRRN*KHPWLMIGTKITPS
Trigger: GCTAGGCGTGATCTTGGTTCCTATCATTAACCAAGGATGCTTCAAATTCCTTCTTACATTCCTTGTTGCATTAGCTGTAGGAACAATGAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR TCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGAGTAGTGCAAGCCACTaGCTTTCCTTTGAGCAATGT +
Preference number: 2 (lower is better)
Translates to: TLAIIYKYLDACAALKVLSSASH*LSFEQC
Trigger: ACATTGCTCAAAGGAAAGTCAGTGGCTTGCACTACT...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR GCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGTGCTCTTGGTTCCAGTaGCAAACTGGTAAAGCAATG +
Preference number: 2 (lower is better)
Translates to: TLAIIYKYLDACAALKVLCSWFQ*QTGKAM
Trigger: CATTGCTTTACCAGTTTGGCACTGGAACCAAGAGCA...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR GCA 90 bp AGCAGGCTAATGACAGTGATAGAAATGATACCACAAATCCAGGCTGATGCCCCTGCTCAATACAAAGTCTaGTGTCGATTTGATATAACA +
Preference number: 2 (lower is better)
Translates to: SRLMTVIEMIPQIQADAPAQYKV*CRFDIT
Trigger: TGTTATATCAAATCGACAGCAGACTTTGTATTGAGC...AGGGGCATCAGCCTGGATTTGTGGTATCATTTCTATCACTGTCATTAGCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430412.5
ENST00000444421.5
3UTR-3UTR GCA 90 bp GAAAGGTCAAAACTGGATGTCAAACACAATTTTATCTTCATAGAGGGCAATCACGAAAGCTGCACCAATTaGGAGCCCATCACTGAAGTT +
Preference number: 2 (lower is better)
Translates to: ERSKLDVKHNFIFIEGNHESCTN*EPITEV
Trigger: AACTTCAGTGATGGGCTCGCAATTGGTGCAGCTTTC...GTGATTGCCCTCTATGAAGATAAAATTGTGTTTGACATCCAGTTTTGACCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR CCA 90 bp CTTCATGTACACATTACAGACATGGTAAACTTCGATTTTCTGCTTTACAACCTTCACGACATGTGCTCTTaGTTCCAGTGCCAAACTGGT +
Preference number: 2 (lower is better)
Translates to: LHVHITDMVNFDFLLYNLHDMCS*FQCQTG
Trigger: ACCAGTTTGGCACTGGAACCAAGAGCACATGTCGTG...AAGGTTGTAAAGCAGAAAATCGAAGTTTACCATGTCTGTAATGTGTACATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR TCA 90 bp CTAATGACAGTGATAGAAATGATACCACAAATCCAGGCTGATGCCCCTATATTTAGTCTGCTGTCGATTTaGTATAACAATGCAGGGCAA +
Preference number: 2 (lower is better)
Translates to: LMTVIEMIPQIQADAPIFSLLSI*YNNAGQ
Trigger: TTGCCCTGCATTGTTATATCAAATCGACAGCAGACT...AAATATAGGGGCATCAGCCTGGATTTGTGGTATCATTTCTATCACTGTCATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430412.5
ENST00000444421.5
3UTR-3UTR GCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATACTGTCCTAATTCAGTaGCCAATGCTGAAAATTAAT +
Preference number: 2 (lower is better)
Translates to: APKRLIPIRHQQHILAQDTVLIQ*PMLKIN
Trigger: ATTAATTTTCAGCATTGGGCACTGAATTAGGACAGT...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR GCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGCTCAATACAAAGTCTaGTGTCGATTTGATATAACA +
Preference number: 2 (lower is better)
Translates to: APKRLIPIRHQQHILAQDAQYKV*CRFDIT
Trigger: TGTTATATCAAATCGACAGCAGACTTTGTATTGAGC...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR CCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGATCAACACTGGTTCATaGAGTCCCATATTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: TLAIIYKYLDACAALKVLINTGS*SPIFSS
Trigger: AGAGGAGAATATGGGACTCCATGAACCAGTGTTGAT...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CCA 90 bp CTAATGACAGTGATAGAAATGATACCACAAATCCAGGCTGATGCCCCTATATTTTTGAGATGGGAGAGTTaGCACCATGACCATAGTATT +
Preference number: 2 (lower is better)
Translates to: LMTVIEMIPQIQADAPIFLRWES*HHDHSI
Trigger: AATACTATGGTCATGGTGCCAACTCTCCCATCTCAA...AAATATAGGGGCATCAGCCTGGATTTGTGGTATCATTTCTATCACTGTCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430412.5
ENST00000444421.5
3UTR-3UTR TCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACATGTTATTGGCATACTaGCCAACAGCTGTGCCTATG +
Preference number: 2 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHMLLAY*PTAVPM
Trigger: CATAGGCACAGCTGTTGGTCAGTATGCCAATAACAT...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR GCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGCCTGGATGCATGTGCTaGTCTCAAAGTTTTGTTTTT +
Preference number: 2 (lower is better)
Translates to: TLAIIYKYLDACAALKVLPGCMC*SQSFVF
Trigger: AAAAACAAAACTTTGAGAGCAGCACATGCATCCAGG...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CCA 90 bp GAAAGGTCAAAACTGGATGTCAAACACAATTTTATCTTCATAGAGGGCAATCACATCAACACTGGTTCATaGAGTCCCATATTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: ERSKLDVKHNFIFIEGNHINTGS*SPIFSS
Trigger: AGAGGAGAATATGGGACTCCATGAACCAGTGTTGAT...GTGATTGCCCTCTATGAAGATAAAATTGTGTTTGACATCCAGTTTTGACCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR GCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATCCTATGTCTACTTTATaGAGTTTCAAAGTTGTGTCA +
Preference number: 2 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNPMSTL*SFKVVS
Trigger: TGACACAACTTTGAAACTGCATAAAGTAGACATAGG...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATCAAACATATCAACACTaGTTCATGGAGTCCCATATT +
Preference number: 2 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNQTYQH*FMESHI
Trigger: AATATGGGACTCCATGAACCAGTGTTGATATGTTTG...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGTACATTAGAATGATGTaGAACCCTAATACTAGCAGC +
Preference number: 2 (lower is better)
Translates to: TLAIIYKYLDACAALKVLYIRMM*NPNTSS
Trigger: GCTGCTAGTATTAGGGTTCCACATCATTCTAATGTA...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATAATTTGAAGCATCCTTaGTTAATGATAGGAACCAAG +
Preference number: 2 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNNLKHP*LMIGTK
Trigger: CTTGGTTCCTATCATTAACCAAGGATGCTTCAAATT...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR CCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTCTATGTAAGCCATCATaGCAGAGAGGAGGTTGTATA +
Preference number: 2 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTLCKPS*QRGGCI
Trigger: TATACAACCTCCTCTCTGCCATGATGGCTTACATAG...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR GCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATCCTATGTCTACTTTATaGAGTTTCAAAGTTGTGTCA +
Preference number: 2 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNPMSTL*SFKVVS
Trigger: TGACACAACTTTGAAACTGCATAAAGTAGACATAGG...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR GCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTATACCTGGATGCATGTaGTGCTCTCAAAGTTTTGTT +
Preference number: 2 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTIPGCM*CSQSFV
Trigger: AACAAAACTTTGAGAGCAGCACATGCATCCAGGTAT...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR GCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACGAGGTTGTATACAATTaGTTGCTTTACAGTCATGCC +
Preference number: 2 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHEVVYN*LLYSHA
Trigger: GGCATGACTGTAAAGCAAGCAATTGTATACAACCTC...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR GCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACTTGTCACCATCACCATaGAACATTTCTGGAAGCATA +
Preference number: 2 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHLSPSP*NISGSI
Trigger: TATGCTTCCAGAAATGTTGCATGGTGATGGTGACAA...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR CAA 90 bp GACAGCCATGGCAATAATGGAGTTTATCCTAGTAACTGTTCTAAATaGACACTTCATGTACACATTACAGACATGGTAAACTTCGATTTT +
Preference number: 2 (lower is better)
Translates to: DSHGNNGVYPSNCSK*TLHVHITDMVNFDF
Trigger: AAAATCGAAGTTTACCATGTCTGTAATGTGTACATGAAGTGTCAATTTAGAACAGTTACTAGGATAAACTCCATTATTGCCATGGCTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR TCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACGGAACATACATAAAATaGCACACCACTGTTGACAAT +
Preference number: 2 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHGTYIK*HTTVDN
Trigger: ATTGTCAACAGTGGTGTGTCATTTTATGTATGTTCC...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR GCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACAGGATAAACATGGCTTaGACTTCTCACAAATCATTC +
Preference number: 2 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHRINMA*TSHKSF
Trigger: GAATGATTTGTGAGAAGTGCAAGCCATGTTTATCCT...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACTACATTAGAATGATGTaGAACCCTAATACTAGCAGC +
Preference number: 2 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHYIRMM*NPNTSS
Trigger: GCTGCTAGTATTAGGGTTCCACATCATTCTAATGTA...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACGATCATGCTCATGAATaGTATGTAATCCATCACTGT +
Preference number: 2 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHDHAHE*YVIHHC
Trigger: ACAGTGATGGATTACATACCATTCATGAGCATGATC...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR CAA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTCCACGACATGTGCTCTaGGTTCCAGTGCCAAACTGG +
Preference number: 3 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVPRHVL*VPVPNW
Trigger: CCAGTTTGGCACTGGAACCAAGAGCACATGTCGTGG...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTATGCCCATGTGCATGTaGGTGACTGTGATCATGTCC +
Preference number: 3 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVMPMCM*VTVIMS
Trigger: GGACATGATCACAGTCACCAACATGCACATGGGCAT...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR GCA 72 bp TTTCTGCTTTACAACCTTGTAGCCAGCCACGACATGTaGTCTTGGTTCCAGTGCCAAACTGGTAAAGCAATG +
Preference number: 3 (lower is better)
Translates to: FLLYNLVASHDM*SWFQCQTGKAM
Trigger: CATTGCTTTACCAGTTTGGCACTGGAACCAAGAGCACATGTCGTGGCTGGCTACAAGGTTGTAAAGCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR GCA 72 bp GTTAGATTCATGTCCATGAGAATGTCCATGCCCATGTaGATGTTGGTGACTGTGATCATGTCCACCCTGAGA +
Preference number: 3 (lower is better)
Translates to: VRFMSMRMSMPM*MLVTVIMSTLR
Trigger: TCTCAGGGTGGACATGATCACAGTCACCAACATGCACATGGGCATGGACATTCTCATGGACATGAATCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR GCA 72 bp CACCAAGGCTACATAGAGGAACATGCCTGCAGTGACTaGAAAGATCCAAAGTGTGATGTTATTGGCATACTG +
Preference number: 3 (lower is better)
Translates to: HQGYIEEHACSD*KDPKCDVIGIL
Trigger: CAGTATGCCAATAACATCACACTTTGGATCTTTGCAGTCACTGCAGGCATGTTCCTCTATGTAGCCTTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR CAA 90 bp CATGGTAAACTTCGATTTTCTGCTTTACAACCTTGTAGCCAGCCACGACATGTGGCCACTGACTTTCCTTaGAGCAATGTGCATACAGTA +
Preference number: 3 (lower is better)
Translates to: HGKLRFSALQPCSQPRHVATDFP*SNVHTV
Trigger: TACTGTATGCACATTGCTCAAAGGAAAGTCAGTGGC...CACATGTCGTGGCTGGCTACAAGGTTGTAAAGCAGAAAATCGAAGTTTACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATCAGCAGCTACACTGGTaGCCAAGCAGATTAAAACAA +
Preference number: 3 (lower is better)
Translates to: APKRLIPIRHQQHILAQDQQLHW*PSRLKQ
Trigger: TTGTTTTAATCTGCTTGGCAACCAGTGTAGCTGCTG...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAATTCCTCAGCACAGTTTaGTTCTCGCCGTGGTGGTTA +
Preference number: 3 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQFLSTV*FSPWWL
Trigger: TAACCACCACGGCGAGAACAAAACTGTGCTGAGGAA...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR CAA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATAAGCCATGTTCTTCATaGTCACCATCACCATGCAAC +
Preference number: 3 (lower is better)
Translates to: APKRLIPIRHQQHILAQDKPCSS*SPSPCN
Trigger: GTTGCATGGTGATGGTGACAATGAAGAACATGGCTT...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR GCA 72 bp GCCATCATGGCAGAGAGGAGGTTGTATACAATTGCTTaGTTTACAGTCATGCCTGCTTTAAGAAGAACTGCA +
Preference number: 3 (lower is better)
Translates to: AIMAERRLYTIA*FTVMPALRRTA
Trigger: TGCAGTTCTTCTTAAAGCAGGCATGACTGTAAAGCAAGCAATTGTATACAACCTCCTCTCTGCCATGATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR CAA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGGGGCGTCTCCACTCATaGTTCCTACAGCTAATGCAA +
Preference number: 3 (lower is better)
Translates to: TLAIIYKYLDACAALKVLGRLHS*FLQLMQ
Trigger: TTGCATTAGCTGTAGGAACAATGAGTGGAGACGCCC...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR GCA 72 bp GTAAGCCATCATGGCAGAGAGGAGGTTGTATACAATTaGTTGCTTTACAGTCATGCCTGCTTTAAGAAGAAC +
Preference number: 3 (lower is better)
Translates to: VSHHGREEVVYN*LLYSHACFKKN
Trigger: GTTCTTCTTAAAGCAGGCATGACTGTAAAGCAAGCAATTGTATACAACCTCCTCTCTGCCATGATGGCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR GCA 72 bp AAGCATATCCACCAAGGCTACATAGAGGAACATGCCTaGAGTGACTGCAAAGATCCAAAGTGTGATGTTATT +
Preference number: 3 (lower is better)
Translates to: KHIHQGYIEEHA*SDCKDPKCDVI
Trigger: AATAACATCACACTTTGGATCTTTGCAGTCACTGCAGGCATGTTCCTCTATGTAGCCTTGGTGGATATGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR CAA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGCTAAGCACCAGCCTCTaGTGGTTAGGCTCAAATCTA +
Preference number: 3 (lower is better)
Translates to: TLAIIYKYLDACAALKVLLSTSL*WLGSNL
Trigger: TAGATTTGAGCCTAACCACAAGAGGCTGGTGCTTAG...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCCTAAGCACCAGCCTCTaGTGGTTAGGCTCAAATCTA +
Preference number: 3 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITLSTSL*WLGSNL
Trigger: TAGATTTGAGCCTAACCACAAGAGGCTGGTGCTTAG...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATCTAAGCACCAGCCTCTaGTGGTTAGGCTCAAATCTA +
Preference number: 3 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNLSTSL*WLGSNL
Trigger: TAGATTTGAGCCTAACCACAAGAGGCTGGTGCTTAG...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATCACCAACAGCATATCTaGGCACAAGATGATCAAGTG +
Preference number: 3 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNHQQHI*AQDDQV
Trigger: CACTTGATCATCTTGTGCCAAGATATGCTGTTGGTG...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGCACCTTTTAGCTAGGTaGCTTGAAGGGCCAAGCAAT +
Preference number: 3 (lower is better)
Translates to: TLAIIYKYLDACAALKVLHLLAR*LEGPSN
Trigger: ATTGCTTGGCCCTTCAAGCAACCTAGCTAAAAGGTG...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATTATGCAGTTTCAAAGTaGTGTCAAGTTGATCCCTAT +
Preference number: 3 (lower is better)
Translates to: APKRLIPIRHQQHILAQDYAVSK*CQVDPY
Trigger: ATAGGGATCAACTTGACACAACTTTGAAACTGCATA...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTCATCTTCCAAGTCACTaGGGTACCATGACAGCCATG +
Preference number: 3 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTHLPSH*GTMTAM
Trigger: CATGGCTGTCATGGTACCCAAGTGACTTGGAAGATG...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACCACCTTTTAGCTAGGTaGCTTGAAGGGCCAAGCAAT +
Preference number: 3 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHHLLAR*LEGPSN
Trigger: ATTGCTTGGCCCTTCAAGCAACCTAGCTAAAAGGTG...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTATTCTGAAGGATGAATaGCCCCACAGGACAAAAGCC +
Preference number: 3 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTILKDE*PHRTKA
Trigger: GGCTTTTGTCCTGTGGGGCAATTCATCCTTCAGAAT...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR TCA 72 bp CTCAAATCTATGAAACTTGTAAGTAGTGCAAGCCACTaGCTTTCCTTTGAGCAATGTGCATACAGTACAAGG +
Preference number: 3 (lower is better)
Translates to: LKSMKLVSSASH*LSFEQCAYSTR
Trigger: CCTTGTACTGTATGCACATTGCTCAAAGGAAAGTCAGTGGCTTGCACTACTTACAAGTTTCATAGATTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR TCA 72 bp GGCACCAACAGCATATCTTGGCACAAGATGATCAAGTaGTTTCAGCTGAGTAATTTAAATGCATCTTCCAAG +
Preference number: 3 (lower is better)
Translates to: GTNSISWHKMIK*FQLSNLNASSK
Trigger: CTTGGAAGATGCATTTAAATTACTCAGCTGAAATCACTTGATCATCTTGTGCCAAGATATGCTGTTGGTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACGCCACTGACTTTCCTTaGAGCAATGTGCATACAGTA +
Preference number: 3 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHATDFP*SNVHTV
Trigger: TACTGTATGCACATTGCTCAAAGGAAAGTCAGTGGC...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAATATGCAGTTTCAAAGTaGTGTCAAGTTGATCCCTAT +
Preference number: 3 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQYAVSK*CQVDPY
Trigger: ATAGGGATCAACTTGACACAACTTTGAAACTGCATA...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTCACCAACAGCATATCTaGGCACAAGATGATCAAGTG +
Preference number: 3 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTHQQHI*AQDDQV
Trigger: CACTTGATCATCTTGTGCCAAGATATGCTGTTGGTG...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGCAGGATAAACATGGCTaGCACTTCTCACAAATCATT +
Preference number: 3 (lower is better)
Translates to: TLAIIYKYLDACAALKVLQDKHG*HFSQII
Trigger: AATGATTTGTGAGAAGTGCAAGCCATGTTTATCCTG...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGTTAGCAAGAATCACCTaGCAGGACCATAATCACATT +
Preference number: 3 (lower is better)
Translates to: TLAIIYKYLDACAALKVLLARIT*QDHNHI
Trigger: AATGTGATTATGGTCCTGCAAGGTGATTCTTGCTAA...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR TCA 72 bp TGCTCTTGGTTCCAGTGCCAAACTGGTAAAGCAATGTaGACATTCAGAACTTACATTTCCCAATTAACTAGT +
Preference number: 3 (lower is better)
Translates to: CSWFQCQTGKAM*TFRTYISQLTS
Trigger: ACTAGTTAATTGGGAAATGTAAGTTCTGAATGTTCACATTGCTTTACCAGTTTGGCACTGGAACCAAGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR CCA 72 bp CTGCATGGTAACATTCTCGTAATCAACAGTGATTACTaGGAAAGGTCAAAACTGGATGTCAAACACAATTTT +
Preference number: 3 (lower is better)
Translates to: LHGNILVINSDY*ERSKLDVKHNF
Trigger: AAAATTGTGTTTGACATCCAGTTTTGACCTTTCCCAGTAATCACTGTTGATTACGAGAATGTTACCATGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR-3UTR CAA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTCAGGATAAACATGGCTaGCACTTCTCACAAATCATT +
Preference number: 3 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTQDKHG*HFSQII
Trigger: AATGATTTGTGAGAAGTGCAAGCCATGTTTATCCTG...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
3UTR-3UTR CAA 90 bp GTATACAATTGCTTGCTTTACAGTCATGCCTGCTTTAAGAAGAACTGCAAAATCGAATTTGAAGCATCCTaGGTTAATGATAGGAACCAA +
Preference number: 3 (lower is better)
Translates to: VYNCLLYSHACFKKNCKIEFEAS*VNDRNQ
Trigger: TTGGTTCCTATCATTAACCAAGGATGCTTCAAATTC...GATTTTGCAGTTCTTCTTAAAGCAGGCATGACTGTAAAGCAAGCAATTGTATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
3UTR GCA 72 bp CAACTAAAAGTTTGTCAAAATGCTCAATACAAAGTCTaGTGTCGATTTGATATAACAATGCAGGGCAAAGGT +
Preference number: 3 (lower is better)
Translates to: QLKVCQNAQYKV*CRFDITMQGKG
Trigger: ACCTTTGCCCTGCATTGTTATATCAAATCGACAGCAGACTTTGTATTGAGCATTTTGACAAACTTTTAGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430412.5
ENST00000444421.5
3UTR TCA 72 bp TTGATATATACCAAAATTCATATGGATGTCACACAGTaGCAGCATTGTACAAGTAACGTTAATGACCTCCAA +
Preference number: 3 (lower is better)
Translates to: LIYTKIHMDVTQ*QHCTSNVNDLQ
Trigger: TTGGAGGTCATTAACGTTACTTGTACAATGCTGTCACTGTGTGACATCCATATGAATTTTGGTATATATCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp AAGACCCCTACGTGCAGGGAAAACAGTACTAAGCACCAGCCTCTTGTGGTTAGGCCACGATGCTGTCTGTaGAGCGCTTCAGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: KTPTCRENSTKHQPLVVRPRCCL*SASGPW
Trigger: CCATGGCCCTGAAGCGCTTCACAGACAGCATCGTGG...CCTAACCACAAGAGGCTGGTGCTTAGTACTGTTTTCCCTGCACGTAGGGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR GCA 90 bp AAGACCCCTACGTGCAGGGAAAACAGTACTAAGCACCAGCCTCTTGTGGTTAGGGCCAGCCACGACATGTaGTCTTGGTTCCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: KTPTCRENSTKHQPLVVRASHDM*SWFQCQ
Trigger: TTGGCACTGGAACCAAGAGCACATGTCGTGGCTGGC...CCTAACCACAAGAGGCTGGTGCTTAGTACTGTTTTCCCTGCACGTAGGGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp AGCAGGCTAATGACAGTGATAGAAATGATACCACAAATCCAGGCTGATGCCCCTGCAGACTGCGCTAACTaGGTCGCAGAAACCGGCGCG +
Preference number: 4 (lower is better)
Translates to: SRLMTVIEMIPQIQADAPADCAN*VAETGA
Trigger: CGCGCCGGTTTCTGCGACGCAGTTAGCGCAGTCTGC...AGGGGCATCAGCCTGGATTTGTGGTATCATTTCTATCACTGTCATTAGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CCA 90 bp AAGACCCCTACGTGCAGGGAAAACAGTACTAAGCACCAGCCTCTTGTGGTTAGGTTGTTCTCGCCGTGGTaGTTATGTGCAGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: KTPTCRENSTKHQPLVVRLFSPW*LCAAAW
Trigger: CCATGCTGCTGCACATAACCACCACGGCGAGAACAA...CCTAACCACAAGAGGCTGGTGCTTAGTACTGTTTTCCCTGCACGTAGGGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp AAGACCCCTACGTGCAGGGAAAACAGTACTAAGCACCAGCCTCTTGTGGTTAGGGGAACATGCCTGCAGTaGCTGCAAAGATCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: KTPTCRENSTKHQPLVVRGTCLQ*LQRSKV
Trigger: CACTTTGGATCTTTGCAGTCACTGCAGGCATGTTCC...CCTAACCACAAGAGGCTGGTGCTTAGTACTGTTTTCCCTGCACGTAGGGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp AGCAGGCTAATGACAGTGATAGAAATGATACCACAAATCCAGGCTGATGCCCCTCAAGTCTACGCAAACTaGGGAGTTCCGTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: SRLMTVIEMIPQIQADAPQVYAN*GVPWLR
Trigger: GCGGAGCCACGGAACTCCGCAGTTTGCGTAGACTTG...AGGGGCATCAGCCTGGATTTGTGGTATCATTTCTATCACTGTCATTAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444421.5
CDS-3UTR TCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCTCGAACGTCGGTTGCTaGGGCCTTGGGCAAGGCGAA +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVISNVGC*GLGQGE
Trigger: TTCGCCTTGCCCAAGGCCTCAGCAACCGACGTTCGA...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS-3UTR GCA 90 bp CTGTTTCTTTCAGATCGGATCCAGAATGACAGGGGCCATGGGAATGATGAGAATTTCCTCACACTCGAGTaGCGTGTGCATCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LFLSDRIQNDRGHGNDENFLTLE*RVHLLS
Trigger: GGAGAGGAGATGCACACGGCACTCGAGTGTGAGGAA...ATTCTCATCATTCCCATGGCCCCTGTCATTCTGGATCCGATCTGAAAGAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR GCA 90 bp AAGACCCCTACGTGCAGGGAAAACAGTACTAAGCACCAGCCTCTTGTGGTTAGGATGTCCATGCCCATGTaGATGTTGGTGACTGTGATC +
Preference number: 4 (lower is better)
Translates to: KTPTCRENSTKHQPLVVRMSMPM*MLVTVI
Trigger: GATCACAGTCACCAACATGCACATGGGCATGGACAT...CCTAACCACAAGAGGCTGGTGCTTAGTACTGTTTTCCCTGCACGTAGGGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCGCGCGTCTGACACCCTaGTACGCTTGCGGCGTACAA +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVIARLTP*YACGVQ
Trigger: TTGTACGCCGCAAGCGTAGCAGGGTGTCAGACGCGC...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATACGCCGCGGGGGAGTTaGGGCGGCTTCTTAACGCAT +
Preference number: 4 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNTPRGS*GGFLTH
Trigger: ATGCGTTAAGAAGCCGCCCCAACTCCCCCGCGGCGT...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS-3UTR TCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATTTGCGAGCCCATCACTaGAGTTGTGGATGCCATCCC +
Preference number: 4 (lower is better)
Translates to: APKRLIPIRHQQHILAQDLRAHH*SCGCHP
Trigger: GGGATGGCATCCACAACTTCAGTGATGGGCTCGCAA...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTTTCCTCACACTCGAGTaGCGTGTGCATCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVFLTLE*RVHLLS
Trigger: GGAGAGGAGATGCACACGGCACTCGAGTGTGAGGAA...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000430412.5
CDS-3UTR GCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGCCAGCCACGACATGTaGTCTTGGTTCCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: APKRLIPIRHQQHILAQDASHDM*SWFQCQ
Trigger: TTGGCACTGGAACCAAGAGCACATGTCGTGGCTGGC...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp ATCACGCCTAGCAAGGAAAGCAGGCTAATGACAGTGATAGAAATGATACCACAAACACCCTGCTACGCTTaGGGCGTACAAGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: ITPSKESRLMTVIEMIPQTPCYA*GVQGPL
Trigger: GAGTGGACCTTGTACGCCGCAAGCGTAGCAGGGTGT...TTGTGGTATCATTTCTATCACTGTCATTAGCCTGCTTTCCTTGCTAGGCGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR TCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGCCACGATGCTGTCTGTaGAGCGCTTCAGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: TLAIIYKYLDACAALKVLPRCCL*SASGPW
Trigger: CCATGGCCCTGAAGCGCTTCACAGACAGCATCGTGG...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR TCA 90 bp TCAAAACTGGATGTCAAACACAATTTTATCTTCATAGAGGGCAATCACCAGCATAGAAACCGGCGCGTCTaGCACCCTGCTACGCTTGCG +
Preference number: 4 (lower is better)
Translates to: SKLDVKHNFIFIEGNHQHRNRRV*HPATLA
Trigger: CGCAAGCGTAGCAGGGTGTCAGACGCGCCGGTTTCT...ATGCTGGTGATTGCCCTCTATGAAGATAAAATTGTGTTTGACATCCAGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CCA 90 bp AAGACCCCTACGTGCAGGGAAAACAGTACTAAGCACCAGCCTCTTGTGGTTAGGTTGAGATGGGAGAGTTaGCACCATGACCATAGTATT +
Preference number: 4 (lower is better)
Translates to: KTPTCRENSTKHQPLVVRLRWES*HHDHSI
Trigger: AATACTATGGTCATGGTGCCAACTCTCCCATCTCAA...CCTAACCACAAGAGGCTGGTGCTTAGTACTGTTTTCCCTGCACGTAGGGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp GATTCCTCCTGTCAATCCAGCACTGAAAGCTGCACCAATTGCGAGCCCATCACTCTATGTAAGCCATCATaGCAGAGAGGAGGTTGTATA +
Preference number: 4 (lower is better)
Translates to: DSSCQSSTESCTNCEPITLCKPS*QRGGCI
Trigger: TATACAACCTCCTCTCTGCCATGATGGCTTACATAG...AGTGATGGGCTCGCAATTGGTGCAGCTTTCAGTGCTGGATTGACAGGAGGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR TCA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTTTGTGGTGCCACTGGTaGTTATGCTTCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVLWCHW*LCFLST
Trigger: TGTGCTGAGGAAGCATAATCACCAGTGGCACCACAA...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATTTGCGAGCCCATCACTaGAGTTGTGGATGCCATCCC +
Preference number: 4 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNLRAHH*SCGCHP
Trigger: GGGATGGCATCCACAACTTCAGTGATGGGCTCGCAA...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp CATGGTAAACTTCGATTTTCTGCTTTACAACCTTGTAGCCAGCCACGACATGTGCTGTCAATCCAGCACTaGAAGCTGCACCAATTGCGA +
Preference number: 4 (lower is better)
Translates to: HGKLRFSALQPCSQPRHVLSIQH*KLHQLR
Trigger: TCGCAATTGGTGCAGCTTTCAGTGCTGGATTGACAG...CACATGTCGTGGCTGGCTACAAGGTTGTAAAGCAGAAAATCGAAGTTTACCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp GATTCCTCCTGTCAATCCAGCACTGAAAGCTGCACCAATTGCGAGCCCATCACTAAAGTTGTGTCAAGTTaGTCCCTATCACCACATGAA +
Preference number: 4 (lower is better)
Translates to: DSSCQSSTESCTNCEPITKVVSS*SLSPHE
Trigger: TTCATGTGGTGATAGGGATCAACTTGACACAACTTT...AGTGATGGGCTCGCAATTGGTGCAGCTTTCAGTGCTGGATTGACAGGAGGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR GCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATGCCAGCCACGACATGTaGTCTTGGTTCCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNASHDM*SWFQCQ
Trigger: TTGGCACTGGAACCAAGAGCACATGTCGTGGCTGGC...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGCAAGTCTACGCAAACTaGGGAGTTCCGTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: TLAIIYKYLDACAALKVLQVYAN*GVPWLR
Trigger: GCGGAGCCACGGAACTCCGCAGTTTGCGTAGACTTG...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS-3UTR CCA 90 bp AGCAGGCTAATGACAGTGATAGAAATGATACCACAAATCCAGGCTGATGCCCCTTCAGGATCAAGATCTTaGTGTCCACGACCAGGATCA +
Preference number: 4 (lower is better)
Translates to: SRLMTVIEMIPQIQADAPSGSRS*CPRPGS
Trigger: TGATCCTGGTCGTGGACACCAAGATCTTGATCCTGA...AGGGGCATCAGCCTGGATTTGTGGTATCATTTCTATCACTGTCATTAGCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430412.5
ENST00000444421.5
CDS-3UTR CCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGTTTTGTTCTCGCCGTaGTGGTTATGTGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: APKRLIPIRHQQHILAQDVLFSP*WLCAAA
Trigger: TGCTGCTGCACATAACCACCACGGCGAGAACAAAAC...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTATTCGCCTTTTCTCCTaGCTTTCGAACGTCGGTTGC +
Preference number: 4 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVIRLFS*LSNVGC
Trigger: GCAACCGACGTTCGAAAGCCAGGAGAAAAGGCGAAT...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS-3UTR TCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCTTCCGGCAAGAGGCTTaGGTTGAAGCCAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVIFRQEA*VEASQN
Trigger: ATTCTGACTGGCTTCAACTCAAGCCTCTTGCCGGAA...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCGGAACATGCCTGCAGTaGCTGCAAAGATCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVIGTCLQ*LQRSKV
Trigger: CACTTTGGATCTTTGCAGTCACTGCAGGCATGTTCC...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTCACTCGAGTGCCGTGTaGATCTCCTCTCCGCTCGGT +
Preference number: 4 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTHSSAV*ISSPLG
Trigger: ACCGAGCGGAGAGGAGATGCACACGGCACTCGAGTG...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000430412.5
CDS-3UTR GCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACCACTCGAGTGCCGTGTaGATCTCCTCTCCGCTCGGT +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHHSSAV*ISSPLG
Trigger: ACCGAGCGGAGAGGAGATGCACACGGCACTCGAGTG...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000430412.5
CDS-3UTR GCA 90 bp AAGACCCCTACGTGCAGGGAAAACAGTACTAAGCACCAGCCTCTTGTGGTTAGGAGGATAAACATGGCTTaGACTTCTCACAAATCATTC +
Preference number: 4 (lower is better)
Translates to: KTPTCRENSTKHQPLVVRRINMA*TSHKSF
Trigger: GAATGATTTGTGAGAAGTGCAAGCCATGTTTATCCT...CCTAACCACAAGAGGCTGGTGCTTAGTACTGTTTTCCCTGCACGTAGGGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATCGGCTTCTTAACGCATaGGTGGAGCGCCCTTTATCA +
Preference number: 4 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNRLLNA*VERPLS
Trigger: TGATAAAGGGCGCTCCACGCATGCGTTAAGAAGCCG...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS-3UTR CCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCAGCGCTTCAGGGCCATaGTCATGTTCTTCATGGCAA +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVISASGP*SCSSWQ
Trigger: TTGCCATGAAGAACATGACCATGGCCCTGAAGCGCT...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCCACGACATGTGCTCTTaGTTCCAGTGCCAAACTGGT +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVIHDMCS*FQCQTG
Trigger: ACCAGTTTGGCACTGGAACCAAGAGCACATGTCGTG...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAACCACGACCAGGATCATaGCCATTACGTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQPRPGS*PLRSGR
Trigger: TCTTCCAGAACGTAATGGTCATGATCCTGGTCGTGG...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR TCA 90 bp AGCAGGCTAATGACAGTGATAGAAATGATACCACAAATCCAGGCTGATGCCCCTAGTCTGCTGTCGATTTaGTATAACAATGCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: SRLMTVIEMIPQIQADAPSLLSI*YNNAGQ
Trigger: TTGCCCTGCATTGTTATATCAAATCGACAGCAGACT...AGGGGCATCAGCCTGGATTTGTGGTATCATTTCTATCACTGTCATTAGCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430412.5
ENST00000444421.5
CDS-3UTR TCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAATTCCGGCAAGAGGCTTaGGTTGAAGCCAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQFRQEA*VEASQN
Trigger: ATTCTGACTGGCTTCAACTCAAGCCTCTTGCCGGAA...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAATTGTGGTGCCACTGGTaGTTATGCTTCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQLWCHW*LCFLST
Trigger: TGTGCTGAGGAAGCATAATCACCAGTGGCACCACAA...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCGGATGCCATCCCCCATaGTCACCATCCAGGCTATAT +
Preference number: 4 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITGCHPP*SPSRLY
Trigger: ATATAGCCTGGATGGTGATCATGGGGGATGGCATCC...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGATGCCATCCCCCATaGTCACCATCCAGGCTATAT +
Preference number: 4 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNGCHPP*SPSRLY
Trigger: ATATAGCCTGGATGGTGATCATGGGGGATGGCATCC...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATCTGTCAATCCAGCACTaGAAGCTGCACCAATTGCGA +
Preference number: 4 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNLSIQH*KLHQLR
Trigger: TCGCAATTGGTGCAGCTTTCAGTGCTGGATTGACAG...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp CATGGTAAACTTCGATTTTCTGCTTTACAACCTTGTAGCCAGCCACGACATGTGTCATGTGGCAGTTCATaGCAGAAGACGGCTATAGAA +
Preference number: 4 (lower is better)
Translates to: HGKLRFSALQPCSQPRHVSCGSS*QKTAIE
Trigger: TTCTATAGCCGTCTTCTGTCATGAACTGCCACATGA...CACATGTCGTGGCTGGCTACAAGGTTGTAAAGCAGAAAATCGAAGTTTACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATCAACAGCTGTGCCTATaGGCATGCCTATGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNQQLCL*ACLCKP
Trigger: TGGCTTACATAGGCATGCTCATAGGCACAGCTGTTG...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp CATGGTAAACTTCGATTTTCTGCTTTACAACCTTGTAGCCAGCCACGACATGTGATAGAGGAACATGCCTaGAGTGACTGCAAAGATCCA +
Preference number: 4 (lower is better)
Translates to: HGKLRFSALQPCSQPRHVIEEHA*SDCKDP
Trigger: TGGATCTTTGCAGTCACTGCAGGCATGTTCCTCTAT...CACATGTCGTGGCTGGCTACAAGGTTGTAAAGCAGAAAATCGAAGTTTACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp AAGACCCCTACGTGCAGGGAAAACAGTACTAAGCACCAGCCTCTTGTGGTTAGGCCTATGTCTACTTTATaGAGTTTCAAAGTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: KTPTCRENSTKHQPLVVRPMSTL*SFKVVS
Trigger: TGACACAACTTTGAAACTGCATAAAGTAGACATAGG...CCTAACCACAAGAGGCTGGTGCTTAGTACTGTTTTCCCTGCACGTAGGGGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp GATTCCTCCTGTCAATCCAGCACTGAAAGCTGCACCAATTGCGAGCCCATCACTACTGTCCTAATTCAGTaGCCAATGCTGAAAATTAAT +
Preference number: 4 (lower is better)
Translates to: DSSCQSSTESCTNCEPITTVLIQ*PMLKIN
Trigger: ATTAATTTTCAGCATTGGGCACTGAATTAGGACAGT...AGTGATGGGCTCGCAATTGGTGCAGCTTTCAGTGCTGGATTGACAGGAGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR GCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAATTCACCAAAGCAGACTaGGCTAACTGCGTCGCAGAA +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQFTKAD*ANCVAE
Trigger: TTCTGCGACGCAGTTAGCGCAGTCTGCTTTGGTGAA...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CCA 90 bp AAGACCCCTACGTGCAGGGAAAACAGTACTAAGCACCAGCCTCTTGTGGTTAGGTTTTTGTGGATACACTaGTCACAGTTTGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: KTPTCRENSTKHQPLVVRFLWIH*SQFDFL
Trigger: CAGAAAATCAAACTGTGACCAGTGTATCCACAAAAA...CCTAACCACAAGAGGCTGGTGCTTAGTACTGTTTTCCCTGCACGTAGGGGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CCA 90 bp AGCAGGCTAATGACAGTGATAGAAATGATACCACAAATCCAGGCTGATGCCCCTTTGAGATGGGAGAGTTaGCACCATGACCATAGTATT +
Preference number: 4 (lower is better)
Translates to: SRLMTVIEMIPQIQADAPLRWES*HHDHSI
Trigger: AATACTATGGTCATGGTGCCAACTCTCCCATCTCAA...AGGGGCATCAGCCTGGATTTGTGGTATCATTTCTATCACTGTCATTAGCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430412.5
ENST00000444421.5
CDS-3UTR CCA 90 bp AGCAGGCTAATGACAGTGATAGAAATGATACCACAAATCCAGGCTGATGCCCCTATAAATCAGTTGAGATaGGAGAGTTGGCACCATGAC +
Preference number: 4 (lower is better)
Translates to: SRLMTVIEMIPQIQADAPINQLR*ESWHHD
Trigger: GTCATGGTGCCAACTCTCCCATCTCAACTGATTTAT...AGGGGCATCAGCCTGGATTTGTGGTATCATTTCTATCACTGTCATTAGCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430412.5
ENST00000444421.5
CDS-3UTR CCA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTGGAGGGGATTCTTGTTaGCCTTCTAAATCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVGGDSC*PSKSVS
Trigger: ACTGACAGATTTAGAAGGCCAACAAGAATCCCCTCC...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATCCATCACTGAAGTTGTaGATGCCATCCCCCATGATC +
Preference number: 4 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNPSLKL*MPSPMI
Trigger: GATCATGGGGGATGGCATCCACAACTTCAGTGATGG...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCAACTGCGGAGTTCCGTaGCTCCGCGCTAGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITNCGVP*LRASFV
Trigger: AACAAAACTAGCGCGGAGCCACGGAACTCCGCAGTT...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS-3UTR CCA 90 bp CTAATGACAGTGATAGAAATGATACCACAAATCCAGGCTGATGCCCCTATATTTAACTGCGGAGTTCCGTaGCTCCGCGCTAGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: LMTVIEMIPQIQADAPIFNCGVP*LRASFV
Trigger: AACAAAACTAGCGCGGAGCCACGGAACTCCGCAGTT...AAATATAGGGGCATCAGCCTGGATTTGTGGTATCATTTCTATCACTGTCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444421.5
CDS-3UTR CCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATTTTTCGGATTCCACATaGATCGTCCGAGGAATAGGA +
Preference number: 4 (lower is better)
Translates to: APKRLIPIRHQQHILAQDFSDST*IVRGIG
Trigger: TCCTATTCCTCGGACGATCCATGTGGAATCCGAAAA...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409086.7
3UTR CAA 72 bp AGCCATCATGGCAGAGAGGAGGTTGTATACAATTGCTaGCTTTACAGTCATGCCTGCTTTAAGAAGAACTGC +
Preference number: 4 (lower is better)
Translates to: SHHGREEVVYNC*LYSHACFKKNC
Trigger: GCAGTTCTTCTTAAAGCAGGCATGACTGTAAAGCAAGCAATTGTATACAACCTCCTCTCTGCCATGATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR TCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATTTTATTGGTCTCTGTTaGAGGTTCATTGCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: APKRLIPIRHQQHILAQDFIGLC*RFIARL
Trigger: GAGCCTAGCAATGAACCTTCAACAGAGACCAATAAA...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR TCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATTTCCGGCAAGAGGCTTaGGTTGAAGCCAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNFRQEA*VEASQN
Trigger: ATTCTGACTGGCTTCAACTCAAGCCTCTTGCCGGAA...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCTCATGTGGCAGTTCATaGCAGAAGACGGCTATAGAA +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVISCGSS*QKTAIE
Trigger: TTCTATAGCCGTCTTCTGTCATGAACTGCCACATGA...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGCAACAGCTGTGCCTATaGGCATGCCTATGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: TLAIIYKYLDACAALKVLQQLCL*ACLCKP
Trigger: TGGCTTACATAGGCATGCTCATAGGCACAGCTGTTG...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCATGTTATTGGCATACTaGCCAACAGCTGTGCCTATG +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVIMLLAY*PTAVPM
Trigger: CATAGGCACAGCTGTTGGTCAGTATGCCAATAACAT...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAACATGCCTGCAGTaGCTGCAAAGATCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNGTCLQ*LQRSKV
Trigger: CACTTTGGATCTTTGCAGTCACTGCAGGCATGTTCC...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATAGCAATCCTAAATTCTaGAGGATGAATTGCCCCACA +
Preference number: 4 (lower is better)
Translates to: APKRLIPIRHQQHILAQDSNPKF*RMNCPT
Trigger: TGTGGGGCAATTCATCCTTCAGAATTTAGGATTGCT...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCAGTAGTGCAAGCCACTaGCTTTCCTTTGAGCAATGT +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVISSASH*LSFEQC
Trigger: ACATTGCTCAAAGGAAAGTCAGTGGCTTGCACTACT...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp CATGGTAAACTTCGATTTTCTGCTTTACAACCTTGTAGCCAGCCACGACATGTGTTTACCTGGCATAAATaGAGACCATGTGGCATAGGA +
Preference number: 4 (lower is better)
Translates to: HGKLRFSALQPCSQPRHVFTWHK*RPCGIG
Trigger: TCCTATGCCACATGGTCTTCATTTATGCCAGGTAAA...CACATGTCGTGGCTGGCTACAAGGTTGTAAAGCAGAAAATCGAAGTTTACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp ATCACGCCTAGCAAGGAAAGCAGGCTAATGACAGTGATAGAAATGATACCACAACCACGACCAGGATCATaGCCATTACGTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: ITPSKESRLMTVIEMIPQPRPGS*PLRSSF
Trigger: AAATGAAGAACGTAATGGTCATGATCCTGGTCGTGG...TTGTGGTATCATTTCTATCACTGTCATTAGCCTGCTTTCCTTGCTAGGCGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430412.5
ENST00000444421.5
CDS-3UTR GCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAAGAAAGCTGCACCAATTaGGAGCCCATCACTGAAGTT +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQESCTN*EPITEV
Trigger: AACTTCAGTGATGGGCTCGCAATTGGTGCAGCTTTC...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp CTGTTTCTTTCAGATCGGATCCAGAATGACAGGGGCCATGGGAATGATGAGAATATACCTGGATGCATGTaGTGCTCTCAAAGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: LFLSDRIQNDRGHGNDENIPGCM*CSQSFV
Trigger: AACAAAACTTTGAGAGCAGCACATGCATCCAGGTAT...ATTCTCATCATTCCCATGGCCCCTGTCATTCTGGATCCGATCTGAAAGAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR GCA 90 bp CATGGTAAACTTCGATTTTCTGCTTTACAACCTTGTAGCCAGCCACGACATGTGGATTTAATGCTGGAATaGAGAATCCTACCGTGGGTA +
Preference number: 4 (lower is better)
Translates to: HGKLRFSALQPCSQPRHVDLMLE*RILPWV
Trigger: TACCCACGGTAGGATTCTGCATTCCAGCATTAAATC...CACATGTCGTGGCTGGCTACAAGGTTGTAAAGCAGAAAATCGAAGTTTACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGAGCGCTTCAGGGCCATaGTCATGTTCTTCATGGCAA +
Preference number: 4 (lower is better)
Translates to: TLAIIYKYLDACAALKVLSASGP*SCSSWQ
Trigger: TTGCCATGAAGAACATGACCATGGCCCTGAAGCGCT...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCACACGATCAGGTTTGTaGACCCGATTATGCTCATAC +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVITRSGL*TRLCSY
Trigger: GTATGAGCATAATCGGGTCCACAAACCTGATCGTGT...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAATCAGGATCAAGATCTTaGTGTCCACGACCAGGATCA +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQSGSRS*CPRPGS
Trigger: TGATCCTGGTCGTGGACACCAAGATCTTGATCCTGA...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATTCAGGATCAAGATCTTaGTGTCCACGACCAGGATCA +
Preference number: 4 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNSGSRS*CPRPGS
Trigger: TGATCCTGGTCGTGGACACCAAGATCTTGATCCTGA...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTTTGAGATGGGAGAGTTaGCACCATGACCATAGTATT +
Preference number: 4 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVLRWES*HHDHSI
Trigger: AATACTATGGTCATGGTGCCAACTCTCCCATCTCAA...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGGTTTTGTTCTCGCCGTaGTGGTTATGTGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TLAIIYKYLDACAALKVLVLFSP*WLCAAA
Trigger: TGCTGCTGCACATAACCACCACGGCGAGAACAAAAC...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp CTAATGACAGTGATAGAAATGATACCACAAATCCAGGCTGATGCCCCTATATTTGTTTTGTTCTCGCCGTaGTGGTTATGTGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LMTVIEMIPQIQADAPIFVLFSP*WLCAAA
Trigger: TGCTGCTGCACATAACCACCACGGCGAGAACAAAAC...AAATATAGGGGCATCAGCCTGGATTTGTGGTATCATTTCTATCACTGTCATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATCCATCACTGAAGTTGTaGATGCCATCCCCCATGATC +
Preference number: 4 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNPSLKL*MPSPMI
Trigger: GATCATGGGGGATGGCATCCACAACTTCAGTGATGG...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGCCATCACTGAAGTTGTaGATGCCATCCCCCATGATC +
Preference number: 4 (lower is better)
Translates to: TLAIIYKYLDACAALKVLPSLKL*MPSPMI
Trigger: GATCATGGGGGATGGCATCCACAACTTCAGTGATGG...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCACCATGCAACATTTCTaGAAGCATATCCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVITMQHF*KHIHQG
Trigger: GCCTTGGTGGATATGCTTCCAGAAATGTTGCATGGT...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCCACGACATGTGCTCTTaGTTCCAGTGCCAAACTGGT +
Preference number: 4 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITHDMCS*FQCQTG
Trigger: ACCAGTTTGGCACTGGAACCAAGAGCACATGTCGTG...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCTTAGATTCATGTCCATaGGAATGTCCATGCCCATGT +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVILDSCP*ECPCPC
Trigger: ACATGGGCATGGACATTCTCATGGACATGAATCTAA...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp CATGGTAAACTTCGATTTTCTGCTTTACAACCTTGTAGCCAGCCACGACATGTGTGGAGATCATGCTCATaGATGGTATGTAATCCATCA +
Preference number: 4 (lower is better)
Translates to: HGKLRFSALQPCSQPRHVWRSCS*MVCNPS
Trigger: TGATGGATTACATACCATTCATGAGCATGATCTCCA...CACATGTCGTGGCTGGCTACAAGGTTGTAAAGCAGAAAATCGAAGTTTACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp CTTCATGTACACATTACAGACATGGTAAACTTCGATTTTCTGCTTTACAACCTTGGATGCCATCCCCCATaGTCACCATCCAGGCTATAT +
Preference number: 4 (lower is better)
Translates to: LHVHITDMVNFDFLLYNLGCHPP*SPSRLY
Trigger: ATATAGCCTGGATGGTGATCATGGGGGATGGCATCC...AAGGTTGTAAAGCAGAAAATCGAAGTTTACCATGTCTGTAATGTGTACATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAATCATGTGGCAGTTCATaGCAGAAGACGGCTATAGAA +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQSCGSS*QKTAIE
Trigger: TTCTATAGCCGTCTTCTGTCATGAACTGCCACATGA...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCCTTGGGCAAGGCGAATaGGTAATGGAAGCTCTAAAC +
Preference number: 4 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITLGQGE*VMEALN
Trigger: GTTTAGAGCTTCCATTACTCATTCGCCTTGCCCAAG...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS-3UTR GCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGAAAGCTGCACCAATTaGGAGCCCATCACTGAAGTT +
Preference number: 4 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNESCTN*EPITEV
Trigger: AACTTCAGTGATGGGCTCGCAATTGGTGCAGCTTTC...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp CTGTTTCTTTCAGATCGGATCCAGAATGACAGGGGCCATGGGAATGATGAGAATTTGTATACAATTGCTTaGTTTACAGTCATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LFLSDRIQNDRGHGNDENLYTIA*FTVMPA
Trigger: AGCAGGCATGACTGTAAAGCAAGCAATTGTATACAA...ATTCTCATCATTCCCATGGCCCCTGTCATTCTGGATCCGATCTGAAAGAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR GCA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTGAGGTTGTATACAATTaGTTGCTTTACAGTCATGCC +
Preference number: 4 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVEVVYN*LLYSHA
Trigger: GGCATGACTGTAAAGCAAGCAATTGTATACAACCTC...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp CCAGGCTATATTAGCTATTCCTGTTTCTTTCAGATCGGATCCAGAATGACAGGGGAGGTTGTATACAATTaGTTGCTTTACAGTCATGCC +
Preference number: 4 (lower is better)
Translates to: PGYISYSCFFQIGSRMTGEVVYN*LLYSHA
Trigger: GGCATGACTGTAAAGCAAGCAATTGTATACAACCTC...CCCTGTCATTCTGGATCCGATCTGAAAGAAACAGGAATAGCTAATATAGCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR GCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAACATGCCTGCAGTGACTaGAAAGATCCAAAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQHACSD*KDPKCD
Trigger: ATCACACTTTGGATCTTTGCAGTCACTGCAGGCATG...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp CCAGGCTATATTAGCTATTCCTGTTTCTTTCAGATCGGATCCAGAATGACAGGGCCTGGATGCATGTGCTaGTCTCAAAGTTTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: PGYISYSCFFQIGSRMTGPGCMC*SQSFVF
Trigger: AAAAACAAAACTTTGAGAGCAGCACATGCATCCAGG...CCCTGTCATTCTGGATCCGATCTGAAAGAAACAGGAATAGCTAATATAGCCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR GCA 90 bp GTATACAATTGCTTGCTTTACAGTCATGCCTGCTTTAAGAAGAACTGCAAAATCGTACCAAACCCCGGCTaGACCAAATCGTGTATTCAC +
Preference number: 4 (lower is better)
Translates to: VYNCLLYSHACFKKNCKIVPNPG*TKSCIH
Trigger: GTGAATACACGATTTGGTGCAGCCGGGGTTTGGTAC...GATTTTGCAGTTCTTCTTAAAGCAGGCATGACTGTAAAGCAAGCAATTGTATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGTTAGGGGGAAAACCTaGTGTAATAACCTCAGAATT +
Preference number: 4 (lower is better)
Translates to: APKRLIPIRHQQHILAQDVRGKT*CNNLRI
Trigger: AATTCTGAGGTTATTACACCAGGTTTTCCCCCTAAC...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAAGGAGGGGATTCTTGTTaGCCTTCTAAATCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQGGDSC*PSKSVS
Trigger: ACTGACAGATTTAGAAGGCCAACAAGAATCCCCTCC...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp CTTCATGTACACATTACAGACATGGTAAACTTCGATTTTCTGCTTTACAACCTTTTGTTCTCGCCGTGGTaGTTATGTGCAGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: LHVHITDMVNFDFLLYNLLFSPW*LCAAAW
Trigger: CCATGCTGCTGCACATAACCACCACGGCGAGAACAA...AAGGTTGTAAAGCAGAAAATCGAAGTTTACCATGTCTGTAATGTGTACATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp CTGTTTCTTTCAGATCGGATCCAGAATGACAGGGGCCATGGGAATGATGAGAATTACATTAGAATGATGTaGAACCCTAATACTAGCAGC +
Preference number: 4 (lower is better)
Translates to: LFLSDRIQNDRGHGNDENYIRMM*NPNTSS
Trigger: GCTGCTAGTATTAGGGTTCCACATCATTCTAATGTA...ATTCTCATCATTCCCATGGCCCCTGTCATTCTGGATCCGATCTGAAAGAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR TCA 90 bp CATGGTAAACTTCGATTTTCTGCTTTACAACCTTGTAGCCAGCCACGACATGTGTGGCCAAGATCCTCATaGTTAATCTCAACTACTTTT +
Preference number: 4 (lower is better)
Translates to: HGKLRFSALQPCSQPRHVWPRSS*LISTTF
Trigger: AAAAGTAGTTGAGATTAATCATGAGGATCTTGGCCA...CACATGTCGTGGCTGGCTACAAGGTTGTAAAGCAGAAAATCGAAGTTTACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR TCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGTCATACTGTTCACCCTaGTCATGGTTAGGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: TLAIIYKYLDACAALKVLSYCSP*SWLGGK
Trigger: TTTTCCCCCTAACCATGATCAGGGTGAACAGTATGA...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR TCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTCCACGACCAGGATCATaGCCATTACGTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTPRPGS*PLRSGR
Trigger: TCTTCCAGAACGTAATGGTCATGATCCTGGTCGTGG...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR TCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATTGTGAGAATGGTCTATaGTTTTCTCCTCTTCTATAC +
Preference number: 4 (lower is better)
Translates to: APKRLIPIRHQQHILAQDCENGL*FSPLLY
Trigger: GTATAGAAGAGGAGAAAATCATAGACCATTCTCACA...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTTTGTGGTGCCACTGGTaGTTATGCTTCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTLWCHW*LCFLST
Trigger: TGTGCTGAGGAAGCATAATCACCAGTGGCACCACAA...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTCAACAGCTGTGCCTATaGGCATGCCTATGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTQQLCL*ACLCKP
Trigger: TGGCTTACATAGGCATGCTCATAGGCACAGCTGTTG...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGATGTTATTGGCATACTaGCCAACAGCTGTGCCTATG +
Preference number: 4 (lower is better)
Translates to: TLAIIYKYLDACAALKVLMLLAY*PTAVPM
Trigger: CATAGGCACAGCTGTTGGTCAGTATGCCAATAACAT...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp ATCACGCCTAGCAAGGAAAGCAGGCTAATGACAGTGATAGAAATGATACCACAACAAAGATCCAAAGTGTaGTGTTATTGGCATACTGAC +
Preference number: 4 (lower is better)
Translates to: ITPSKESRLMTVIEMIPQQRSKV*CYWHTD
Trigger: GTCAGTATGCCAATAACATCACACTTTGGATCTTTG...TTGTGGTATCATTTCTATCACTGTCATTAGCCTGCTTTCCTTGCTAGGCGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR TCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATAGCAATCCTAAATTCTaGAGGATGAATTGCCCCACA +
Preference number: 4 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNSNPKF*RMNCPT
Trigger: TGTGGGGCAATTCATCCTTCAGAATTTAGGATTGCT...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp ATCACGCCTAGCAAGGAAAGCAGGCTAATGACAGTGATAGAAATGATACCACAATCTCGTAATCAACAGTaGTTACTGGGAAAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: ITPSKESRLMTVIEMIPQSRNQQ*LLGKVK
Trigger: TTTGACCTTTCCCAGTAATCACTGTTGATTACGAGA...TTGTGGTATCATTTCTATCACTGTCATTAGCCTGCTTTCCTTGCTAGGCGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR TCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATCCACTGACTTTCCTTTaGGCAATGTGCATACAGTAC +
Preference number: 4 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNPLTFL*AMCIQY
Trigger: GTACTGTATGCACATTGCTCAAAGGAAAGTCAGTGG...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCAGTAGTGCAAGCCACTaGCTTTCCTTTGAGCAATGT +
Preference number: 4 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITSSASH*LSFEQC
Trigger: ACATTGCTCAAAGGAAAGTCAGTGGCTTGCACTACT...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAATTTACCTGGCATAAATaGAGACCATGTGGCATAGGA +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQFTWHK*RPCGIG
Trigger: TCCTATGCCACATGGTCTTCATTTATGCCAGGTAAA...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAAATGGATGTCACACAGTaGCAGCATTGTACAAGTAAC +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQMDVTQ*QHCTSN
Trigger: GTTACTTGTACAATGCTGTCACTGTGTGACATCCAT...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATTCAATCAATCACAGCTaGTTGATTGAATGCAATGTG +
Preference number: 4 (lower is better)
Translates to: APKRLIPIRHQQHILAQDSINHS*LIECNV
Trigger: CACATTGCATTCAATCAATCAGCTGTGATTGATTGA...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp CATGGTAAACTTCGATTTTCTGCTTTACAACCTTGTAGCCAGCCACGACATGTGGGAACATACATAAAATaGCACACCACTGTTGACAAT +
Preference number: 4 (lower is better)
Translates to: HGKLRFSALQPCSQPRHVGTYIK*HTTVDN
Trigger: ATTGTCAACAGTGGTGTGTCATTTTATGTATGTTCC...CACATGTCGTGGCTGGCTACAAGGTTGTAAAGCAGAAAATCGAAGTTTACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp GTATACAATTGCTTGCTTTACAGTCATGCCTGCTTTAAGAAGAACTGCAAAATCATGTCCATGCCCATGTaGATGTTGGTGACTGTGATC +
Preference number: 4 (lower is better)
Translates to: VYNCLLYSHACFKKNCKIMSMPM*MLVTVI
Trigger: GATCACAGTCACCAACATGCACATGGGCATGGACAT...GATTTTGCAGTTCTTCTTAAAGCAGGCATGACTGTAAAGCAAGCAATTGTATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR GCA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTTTGTATACAATTGCTTaGTTTACAGTCATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVLYTIA*FTVMPA
Trigger: AGCAGGCATGACTGTAAAGCAAGCAATTGTATACAA...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCCATGCCTGCAGTGACTaGAAAGATCCAAAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITHACSD*KDPKCD
Trigger: ATCACACTTTGGATCTTTGCAGTCACTGCAGGCATG...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCTGCTCTTGGTTCCAGTaGCAAACTGGTAAAGCAATG +
Preference number: 4 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITCSWFQ*QTGKAM
Trigger: CATTGCTTTACCAGTTTGGCACTGGAACCAAGAGCA...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATTGCTCTTGGTTCCAGTaGCAAACTGGTAAAGCAATG +
Preference number: 4 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNCSWFQ*QTGKAM
Trigger: CATTGCTTTACCAGTTTGGCACTGGAACCAAGAGCA...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAAGATTTAATGCTGGAATaGAGAATCCTACCGTGGGTA +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQDLMLE*RILPWV
Trigger: TACCCACGGTAGGATTCTGCATTCCAGCATTAAATC...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATATGACCATTACGTTCTaGAAGATGTACATGAGAATG +
Preference number: 4 (lower is better)
Translates to: APKRLIPIRHQQHILAQDMTITF*KMYMRM
Trigger: CATTCTCATGTACATCTTCCAGAACGTAATGGTCAT...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CCA 90 bp CTGTTTCTTTCAGATCGGATCCAGAATGACAGGGGCCATGGGAATGATGAGAATAATTTGAAGCATCCTTaGTTAATGATAGGAACCAAG +
Preference number: 4 (lower is better)
Translates to: LFLSDRIQNDRGHGNDENNLKHP*LMIGTK
Trigger: CTTGGTTCCTATCATTAACCAAGGATGCTTCAAATT...ATTCTCATCATTCCCATGGCCCCTGTCATTCTGGATCCGATCTGAAAGAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CCA 90 bp CCAGGCTATATTAGCTATTCCTGTTTCTTTCAGATCGGATCCAGAATGACAGGGGATCATGCTCATGAATaGTATGTAATCCATCACTGT +
Preference number: 4 (lower is better)
Translates to: PGYISYSCFFQIGSRMTGDHAHE*YVIHHC
Trigger: ACAGTGATGGATTACATACCATTCATGAGCATGATC...CCCTGTCATTCTGGATCCGATCTGAAAGAAACAGGAATAGCTAATATAGCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGACCATGCAACATTTCTaGAAGCATATCCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: TLAIIYKYLDACAALKVLTMQHF*KHIHQG
Trigger: GCCTTGGTGGATATGCTTCCAGAAATGTTGCATGGT...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp CTGTTTCTTTCAGATCGGATCCAGAATGACAGGGGCCATGGGAATGATGAGAATGGGAAAGGTCAAAACTaGATGTCAAACACAATTTTA +
Preference number: 4 (lower is better)
Translates to: LFLSDRIQNDRGHGNDENGKGQN*MSNTIL
Trigger: TAAAATTGTGTTTGACATCCAGTTTTGACCTTTCCC...ATTCTCATCATTCCCATGGCCCCTGTCATTCTGGATCCGATCTGAAAGAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAAATCAACACTGGTTCATaGAGTCCCATATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQINTGS*SPIFSS
Trigger: AGAGGAGAATATGGGACTCCATGAACCAGTGTTGAT...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp CATGGTAAACTTCGATTTTCTGCTTTACAACCTTGTAGCCAGCCACGACATGTGCAAACATATCAACACTaGTTCATGGAGTCCCATATT +
Preference number: 4 (lower is better)
Translates to: HGKLRFSALQPCSQPRHVQTYQH*FMESHI
Trigger: AATATGGGACTCCATGAACCAGTGTTGATATGTTTG...CACATGTCGTGGCTGGCTACAAGGTTGTAAAGCAGAAAATCGAAGTTTACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp CTAATGACAGTGATAGAAATGATACCACAAATCCAGGCTGATGCCCCTATATTTTTTTCGGATTCCACATaGATCGTCCGAGGAATAGGA +
Preference number: 4 (lower is better)
Translates to: LMTVIEMIPQIQADAPIFFSDST*IVRGIG
Trigger: TCCTATTCCTCGGACGATCCATGTGGAATCCGAAAA...AAATATAGGGGCATCAGCCTGGATTTGTGGTATCATTTCTATCACTGTCATTAG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000444421.5
CDS-3UTR TCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATAGTCTGCTGTCGATTTaGTATAACAATGCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNSLLSI*YNNAGQ
Trigger: TTGCCCTGCATTGTTATATCAAATCGACAGCAGACT...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGAGTCTGCTGTCGATTTaGTATAACAATGCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: TLAIIYKYLDACAALKVLSLLSI*YNNAGQ
Trigger: TTGCCCTGCATTGTTATATCAAATCGACAGCAGACT...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp GAAAGGTCAAAACTGGATGTCAAACACAATTTTATCTTCATAGAGGGCAATCACCCACTGACTTTCCTTTaGGCAATGTGCATACAGTAC +
Preference number: 4 (lower is better)
Translates to: ERSKLDVKHNFIFIEGNHPLTFL*AMCIQY
Trigger: GTACTGTATGCACATTGCTCAAAGGAAAGTCAGTGG...GTGATTGCCCTCTATGAAGATAAAATTGTGTTTGACATCCAGTTTTGACCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR TCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATAAAGTTGTGTCAAGTTaGTCCCTATCACCACATGAA +
Preference number: 4 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNKVVSS*SLSPHE
Trigger: TTCATGTGGTGATAGGGATCAACTTGACACAACTTT...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp GAAAGGTCAAAACTGGATGTCAAACACAATTTTATCTTCATAGAGGGCAATCACCCACGACCAGGATCATaGCCATTACGTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: ERSKLDVKHNFIFIEGNHPRPGS*PLRSSF
Trigger: AAATGAAGAACGTAATGGTCATGATCCTGGTCGTGG...GTGATTGCCCTCTATGAAGATAAAATTGTGTTTGACATCCAGTTTTGACCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR GCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACATGTCCATGCCCATGTaGATGTTGGTGACTGTGATC +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHMSMPM*MLVTVI
Trigger: GATCACAGTCACCAACATGCACATGGGCATGGACAT...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTGAAAGCTGCACCAATTaGGAGCCCATCACTGAAGTT +
Preference number: 4 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTESCTN*EPITEV
Trigger: AACTTCAGTGATGGGCTCGCAATTGGTGCAGCTTTC...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCCTTTACAGTCATGCCTaGTTTAAGAAGAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVILYSHA*FKKNCK
Trigger: TTTGCAGTTCTTCTTAAAGCAGGCATGACTGTAAAG...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAAGAGGTTGTATACAATTaGTTGCTTTACAGTCATGCC +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQEVVYN*LLYSHA
Trigger: GGCATGACTGTAAAGCAAGCAATTGTATACAACCTC...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCAGGATAAACATGGCTTaGACTTCTCACAAATCATTC +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVIRINMA*TSHKSF
Trigger: GAATGATTTGTGAGAAGTGCAAGCCATGTTTATCCT...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAACCTGGATGCATGTGCTaGTCTCAAAGTTTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQPGCMC*SQSFVF
Trigger: AAAAACAAAACTTTGAGAGCAGCACATGCATCCAGG...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATGTTCCTGGGTTTTATTaGTCTCTGTTGAAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNVPGFY*SLLKVH
Trigger: ATGAACCTTCAACAGAGACCAATAAAACCCAGGAAC...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACTCAGGATCAAGATCTTaGTGTCCACGACCAGGATCA +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHSGSRS*CPRPGS
Trigger: TGATCCTGGTCGTGGACACCAAGATCTTGATCCTGA...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATATAAATCAGTTGAGATaGGAGAGTTGGCACCATGAC +
Preference number: 4 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNINQLR*ESWHHD
Trigger: GTCATGGTGCCAACTCTCCCATCTCAACTGATTTAT...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTAATTTGAAGCATCCTTaGTTAATGATAGGAACCAAG +
Preference number: 4 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVNLKHP*LMIGTK
Trigger: CTTGGTTCCTATCATTAACCAAGGATGCTTCAAATT...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATCTATGTAAGCCATCATaGCAGAGAGGAGGTTGTATA +
Preference number: 4 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNLCKPS*QRGGCI
Trigger: TATACAACCTCCTCTCTGCCATGATGGCTTACATAG...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCCTATGTAAGCCATCATaGCAGAGAGGAGGTTGTATA +
Preference number: 4 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITLCKPS*QRGGCI
Trigger: TATACAACCTCCTCTCTGCCATGATGGCTTACATAG...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCATCAACAGTGATTACTaGGAAAGGTCAAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVIINSDY*ERSKLD
Trigger: ATCCAGTTTTGACCTTTCCCAGTAATCACTGTTGAT...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATATCAACACTGGTTCATaGAGTCCCATATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNINTGS*SPIFSS
Trigger: AGAGGAGAATATGGGACTCCATGAACCAGTGTTGAT...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCTACATTAGAATGATGTaGAACCCTAATACTAGCAGC +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVIYIRMM*NPNTSS
Trigger: GCTGCTAGTATTAGGGTTCCACATCATTCTAATGTA...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACTTCTTAACGCATGCGTaGAGCGCCCTTTATCATTCG +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHFLTHA*SALYHS
Trigger: CGAATGATAAAGGGCGCTCCACGCATGCGTTAAGAA...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS-3UTR TCA 90 bp CTTCATGTACACATTACAGACATGGTAAACTTCGATTTTCTGCTTTACAACCTTTCATACTGTTCACCCTaGTCATGGTTAGGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LHVHITDMVNFDFLLYNLSYCSP*SWLGGK
Trigger: TTTTCCCCCTAACCATGATCAGGGTGAACAGTATGA...AAGGTTGTAAAGCAGAAAATCGAAGTTTACCATGTCTGTAATGTGTACATGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR TCA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCTGGAGATCATGCTCATaGATGGTATGTAATCCATCA +
Preference number: 4 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITWRSCS*MVCNPS
Trigger: TGATGGATTACATACCATTCATGAGCATGATCTCCA...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGCAAAGATCCAAAGTGTaGTGTTATTGGCATACTGAC +
Preference number: 4 (lower is better)
Translates to: TLAIIYKYLDACAALKVLQRSKV*CYWHTD
Trigger: GTCAGTATGCCAATAACATCACACTTTGGATCTTTG...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp CTTCATGTACACATTACAGACATGGTAAACTTCGATTTTCTGCTTTACAACCTTCCACTGACTTTCCTTTaGGCAATGTGCATACAGTAC +
Preference number: 4 (lower is better)
Translates to: LHVHITDMVNFDFLLYNLPLTFL*AMCIQY
Trigger: GTACTGTATGCACATTGCTCAAAGGAAAGTCAGTGG...AAGGTTGTAAAGCAGAAAATCGAAGTTTACCATGTCTGTAATGTGTACATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATAAAGTTGTGTCAAGTTaGTCCCTATCACCACATGAA +
Preference number: 4 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNKVVSS*SLSPHE
Trigger: TTCATGTGGTGATAGGGATCAACTTGACACAACTTT...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAATCATTTTCAGCAGCTTaGTTTGAAAATTTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQSFSAA*FENLLG
Trigger: GCCAAGCAAATTTTCAAAGCAAGCTGCTGAAAATGA...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR GCA 90 bp ATCACGCCTAGCAAGGAAAGCAGGCTAATGACAGTGATAGAAATGATACCACAAGCTCAATACAAAGTCTaGTGTCGATTTGATATAACA +
Preference number: 4 (lower is better)
Translates to: ITPSKESRLMTVIEMIPQAQYKV*CRFDIT
Trigger: TGTTATATCAAATCGACAGCAGACTTTGTATTGAGC...TTGTGGTATCATTTCTATCACTGTCATTAGCCTGCTTTCCTTGCTAGGCGTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430412.5
ENST00000444421.5
CDS-3UTR GCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATCTTTACAGTCATGCCTaGTTTAAGAAGAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNLYSHA*FKKNCK
Trigger: TTTGCAGTTCTTCTTAAAGCAGGCATGACTGTAAAG...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACCATGCCTGCAGTGACTaGAAAGATCCAAAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHHACSD*KDPKCD
Trigger: ATCACACTTTGGATCTTTGCAGTCACTGCAGGCATG...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTATAGAGGAACATGCCTaGAGTGACTGCAAAGATCCA +
Preference number: 4 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTIEEHA*SDCKDP
Trigger: TGGATCTTTGCAGTCACTGCAGGCATGTTCCTCTAT...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp CTTCATGTACACATTACAGACATGGTAAACTTCGATTTTCTGCTTTACAACCTTATAGAGGAACATGCCTaGAGTGACTGCAAAGATCCA +
Preference number: 4 (lower is better)
Translates to: LHVHITDMVNFDFLLYNLIEEHA*SDCKDP
Trigger: TGGATCTTTGCAGTCACTGCAGGCATGTTCCTCTAT...AAGGTTGTAAAGCAGAAAATCGAAGTTTACCATGTCTGTAATGTGTACATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCTTGTCACCATCACCATaGAACATTTCTGGAAGCATA +
Preference number: 4 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITLSPSP*NISGSI
Trigger: TATGCTTCCAGAAATGTTGCATGGTGATGGTGACAA...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACTGCTCTTGGTTCCAGTaGCAAACTGGTAAAGCAATG +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHCSWFQ*QTGKAM
Trigger: CATTGCTTTACCAGTTTGGCACTGGAACCAAGAGCA...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATAGGATAAACATGGCTTaGACTTCTCACAAATCATTC +
Preference number: 4 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNRINMA*TSHKSF
Trigger: GAATGATTTGTGAGAAGTGCAAGCCATGTTTATCCT...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCACTGTCCTAATTCAGTaGCCAATGCTGAAAATTAAT +
Preference number: 4 (lower is better)
Translates to: VHTVQGTDAKLHGNILVITVLIQ*PMLKIN
Trigger: ATTAATTTTCAGCATTGGGCACTGAATTAGGACAGT...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp GTATACAATTGCTTGCTTTACAGTCATGCCTGCTTTAAGAAGAACTGCAAAATCGATTTAATGCTGGAATaGAGAATCCTACCGTGGGTA +
Preference number: 4 (lower is better)
Translates to: VYNCLLYSHACFKKNCKIDLMLE*RILPWV
Trigger: TACCCACGGTAGGATTCTGCATTCCAGCATTAAATC...GATTTTGCAGTTCTTCTTAAAGCAGGCATGACTGTAAAGCAAGCAATTGTATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACACACGATCAGGTTTGTaGACCCGATTATGCTCATAC +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHTRSGL*TRLCSY
Trigger: GTATGAGCATAATCGGGTCCACAAACCTGATCGTGT...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACGGAGGGGATTCTTGTTaGCCTTCTAAATCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHGGDSC*PSKSVS
Trigger: ACTGACAGATTTAGAAGGCCAACAAGAATCCCCTCC...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTACCATGCAACATTTCTaGAAGCATATCCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTTMQHF*KHIHQG
Trigger: GCCTTGGTGGATATGCTTCCAGAAATGTTGCATGGT...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAAATCAACAGTGATTACTaGGAAAGGTCAAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQINSDY*ERSKLD
Trigger: ATCCAGTTTTGACCTTTCCCAGTAATCACTGTTGAT...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGTTACAGCAGCTACACTaGTTGCCAAGCAGATTAAAA +
Preference number: 4 (lower is better)
Translates to: TLAIIYKYLDACAALKVLLQQLH*LPSRLK
Trigger: TTTTAATCTGCTTGGCAACCAGTGTAGCTGCTGTAA...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCTTACAGCAGCTACACTaGTTGCCAAGCAGATTAAAA +
Preference number: 4 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITLQQLH*LPSRLK
Trigger: TTTTAATCTGCTTGGCAACCAGTGTAGCTGCTGTAA...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAATACATTAGAATGATGTaGAACCCTAATACTAGCAGC +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQYIRMM*NPNTSS
Trigger: GCTGCTAGTATTAGGGTTCCACATCATTCTAATGTA...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCTGGCCAAGATCCTCATaGTTAATCTCAACTACTTTT +
Preference number: 4 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITWPRSS*LISTTF
Trigger: AAAAGTAGTTGAGATTAATCATGAGGATCTTGGCCA...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR TCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACAGTCTGCTGTCGATTTaGTATAACAATGCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHSLLSI*YNNAGQ
Trigger: TTGCCCTGCATTGTTATATCAAATCGACAGCAGACT...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTTTAGATTCATGTCCATaGGAATGTCCATGCCCATGT +
Preference number: 4 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTLDSCP*ECPCPC
Trigger: ACATGGGCATGGACATTCTCATGGACATGAATCTAA...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp TCAAAACTGGATGTCAAACACAATTTTATCTTCATAGAGGGCAATCACCAGCATTGGAGATCATGCTCATaGATGGTATGTAATCCATCA +
Preference number: 4 (lower is better)
Translates to: SKLDVKHNFIFIEGNHQHWRSCS*MVCNPS
Trigger: TGATGGATTACATACCATTCATGAGCATGATCTCCA...ATGCTGGTGATTGCCCTCTATGAAGATAAAATTGTGTTTGACATCCAGTTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR TCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACAGCAATCCTAAATTCTaGAGGATGAATTGCCCCACA +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHSNPKF*RMNCPT
Trigger: TGTGGGGCAATTCATCCTTCAGAATTTAGGATTGCT...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACTTTACCTGGCATAAATaGAGACCATGTGGCATAGGA +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHFTWHK*RPCGIG
Trigger: TCCTATGCCACATGGTCTTCATTTATGCCAGGTAAA...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTATGGATGTCACACAGTaGCAGCATTGTACAAGTAAC +
Preference number: 4 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTMDVTQ*QHCTSN
Trigger: GTTACTTGTACAATGCTGTCACTGTGTGACATCCAT...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGTCAATCAATCACAGCTaGTTGATTGAATGCAATGTG +
Preference number: 4 (lower is better)
Translates to: TLAIIYKYLDACAALKVLSINHS*LIECNV
Trigger: CACATTGCATTCAATCAATCAGCTGTGATTGATTGA...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCGGAACATACATAAAATaGCACACCACTGTTGACAAT +
Preference number: 4 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITGTYIK*HTTVDN
Trigger: ATTGTCAACAGTGGTGTGTCATTTTATGTATGTTCC...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAAGCTCAATACAAAGTCTaGTGTCGATTTGATATAACA +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQAQYKV*CRFDIT
Trigger: TGTTATATCAAATCGACAGCAGACTTTGTATTGAGC...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp TCAAAACTGGATGTCAAACACAATTTTATCTTCATAGAGGGCAATCACCAGCATTTGTCACCATCACCATaGAACATTTCTGGAAGCATA +
Preference number: 4 (lower is better)
Translates to: SKLDVKHNFIFIEGNHQHLSPSP*NISGSI
Trigger: TATGCTTCCAGAAATGTTGCATGGTGATGGTGACAA...ATGCTGGTGATTGCCCTCTATGAAGATAAAATTGTGTTTGACATCCAGTTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR GCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAAACTGTCCTAATTCAGTaGCCAATGCTGAAAATTAAT +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQTVLIQ*PMLKIN
Trigger: ATTAATTTTCAGCATTGGGCACTGAATTAGGACAGT...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATTTTTTGTGGATACACTaGTCACAGTTTGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNFLWIH*SQFDFL
Trigger: CAGAAAATCAAACTGTGACCAGTGTATCCACAAAAA...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACTTGAGATGGGAGAGTTaGCACCATGACCATAGTATT +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHLRWES*HHDHSI
Trigger: AATACTATGGTCATGGTGCCAACTCTCCCATCTCAA...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTATAAATCAGTTGAGATaGGAGAGTTGGCACCATGAC +
Preference number: 4 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTINQLR*ESWHHD
Trigger: GTCATGGTGCCAACTCTCCCATCTCAACTGATTTAT...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCGATCATGCTCATGAATaGTATGTAATCCATCACTGT +
Preference number: 4 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITDHAHE*YVIHHC
Trigger: ACAGTGATGGATTACATACCATTCATGAGCATGATC...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGATCATGCTCATGAATaGTATGTAATCCATCACTGT +
Preference number: 4 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNDHAHE*YVIHHC
Trigger: ACAGTGATGGATTACATACCATTCATGAGCATGATC...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAAGGGAAAGGTCAAAACTaGATGTCAAACACAATTTTA +
Preference number: 4 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQGKGQN*MSNTIL
Trigger: TAAAATTGTGTTTGACATCCAGTTTTGACCTTTCCC...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGATCAACAGTGATTACTaGGAAAGGTCAAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: TLAIIYKYLDACAALKVLINSDY*ERSKLD
Trigger: ATCCAGTTTTGACCTTTCCCAGTAATCACTGTTGAT...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTATCAACACTGGTTCATaGAGTCCCATATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTINTGS*SPIFSS
Trigger: AGAGGAGAATATGGGACTCCATGAACCAGTGTTGAT...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACCAAAGATCCAAAGTGTaGTGTTATTGGCATACTGAC +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHQRSKV*CYWHTD
Trigger: GTCAGTATGCCAATAACATCACACTTTGGATCTTTG...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTTCTCGTAATCAACAGTaGTTACTGGGAAAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTSRNQQ*LLGKVK
Trigger: TTTGACCTTTCCCAGTAATCACTGTTGATTACGAGA...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp CTTCATGTACACATTACAGACATGGTAAACTTCGATTTTCTGCTTTACAACCTTTCTCGTAATCAACAGTaGTTACTGGGAAAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: LHVHITDMVNFDFLLYNLSRNQQ*LLGKVK
Trigger: TTTGACCTTTCCCAGTAATCACTGTTGATTACGAGA...AAGGTTGTAAAGCAGAAAATCGAAGTTTACCATGTCTGTAATGTGTACATGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp GAAAGGTCAAAACTGGATGTCAAACACAATTTTATCTTCATAGAGGGCAATCACTCAATCAATCACAGCTaGTTGATTGAATGCAATGTG +
Preference number: 4 (lower is better)
Translates to: ERSKLDVKHNFIFIEGNHSINHS*LIECNV
Trigger: CACATTGCATTCAATCAATCAGCTGTGATTGATTGA...GTGATTGCCCTCTATGAAGATAAAATTGTGTTTGACATCCAGTTTTGACCTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR GCA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGGCTCAATACAAAGTCTaGTGTCGATTTGATATAACA +
Preference number: 4 (lower is better)
Translates to: TLAIIYKYLDACAALKVLAQYKV*CRFDIT
Trigger: TGTTATATCAAATCGACAGCAGACTTTGTATTGAGC...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp CTTCATGTACACATTACAGACATGGTAAACTTCGATTTTCTGCTTTACAACCTTTTGTCACCATCACCATaGAACATTTCTGGAAGCATA +
Preference number: 4 (lower is better)
Translates to: LHVHITDMVNFDFLLYNLLSPSP*NISGSI
Trigger: TATGCTTCCAGAAATGTTGCATGGTGATGGTGACAA...AAGGTTGTAAAGCAGAAAATCGAAGTTTACCATGTCTGTAATGTGTACATGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp CTTCATGTACACATTACAGACATGGTAAACTTCGATTTTCTGCTTTACAACCTTATACCTGGATGCATGTaGTGCTCTCAAAGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: LHVHITDMVNFDFLLYNLIPGCM*CSQSFV
Trigger: AACAAAACTTTGAGAGCAGCACATGCATCCAGGTAT...AAGGTTGTAAAGCAGAAAATCGAAGTTTACCATGTCTGTAATGTGTACATGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACATACCTGGATGCATGTaGTGCTCTCAAAGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHIPGCM*CSQSFV
Trigger: AACAAAACTTTGAGAGCAGCACATGCATCCAGGTAT...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTGTTAGGGGGAAAACCTaGTGTAATAACCTCAGAATT +
Preference number: 4 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTVRGKT*CNNLRI
Trigger: AATTCTGAGGTTATTACACCAGGTTTTCCCCCTAAC...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CCA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGGAAAGGTCAAAACTaGATGTCAAACACAATTTTA +
Preference number: 4 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNGKGQN*MSNTIL
Trigger: TAAAATTGTGTTTGACATCCAGTTTTGACCTTTCCC...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp GAAAGGTCAAAACTGGATGTCAAACACAATTTTATCTTCATAGAGGGCAATCACCAAACATATCAACACTaGTTCATGGAGTCCCATATT +
Preference number: 4 (lower is better)
Translates to: ERSKLDVKHNFIFIEGNHQTYQH*FMESHI
Trigger: AATATGGGACTCCATGAACCAGTGTTGATATGTTTG...GTGATTGCCCTCTATGAAGATAAAATTGTGTTTGACATCCAGTTTTGACCTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACTTACAGCAGCTACACTaGTTGCCAAGCAGATTAAAA +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHLQQLH*LPSRLK
Trigger: TTTTAATCTGCTTGGCAACCAGTGTAGCTGCTGTAA...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACTGTGAGAATGGTCTATaGTTTTCTCCTCTTCTATAC +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHCENGL*FSPLLY
Trigger: GTATAGAAGAGGAGAAAATCATAGACCATTCTCACA...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR TCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTGGAACATACATAAAATaGCACACCACTGTTGACAAT +
Preference number: 4 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTGTYIK*HTTVDN
Trigger: ATTGTCAACAGTGGTGTGTCATTTTATGTATGTTCC...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTCTTTACAGTCATGCCTaGTTTAAGAAGAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTLYSHA*FKKNCK
Trigger: TTTGCAGTTCTTCTTAAAGCAGGCATGACTGTAAAG...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTTTGTATACAATTGCTTaGTTTACAGTCATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTLYTIA*FTVMPA
Trigger: AGCAGGCATGACTGTAAAGCAAGCAATTGTATACAA...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CCA 90 bp CTTCATGTACACATTACAGACATGGTAAACTTCGATTTTCTGCTTTACAACCTTCAAACATATCAACACTaGTTCATGGAGTCCCATATT +
Preference number: 4 (lower is better)
Translates to: LHVHITDMVNFDFLLYNLQTYQH*FMESHI
Trigger: AATATGGGACTCCATGAACCAGTGTTGATATGTTTG...AAGGTTGTAAAGCAGAAAATCGAAGTTTACCATGTCTGTAATGTGTACATGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR GCA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACGCTCAATACAAAGTCTaGTGTCGATTTGATATAACA +
Preference number: 4 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHAQYKV*CRFDIT
Trigger: TGTTATATCAAATCGACAGCAGACTTTGTATTGAGC...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS GCA 90 bp AGACCCGGAGAGGCGGTGCGCGAAGGTTCCTCTACGCGATCCCCCTaGCGCGCCCCACATCGCTCTCCACCTCACACTCGAGTGCCGTGT +
Preference number: 5 (lower is better)
Translates to: RPGEAVREGSSTRSP*RAPHRSPPHTRVPC
Trigger: ACACGGCACTCGAGTGTGAGGTGGAGAGCGATGTGGGGCGCGGCAGGGGGATCGCGTAGAGGAACCTTCGCGCACCGCCTCTCCGGGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464301.1
CDS GCA 90 bp AGGAGAGGCAAGGAGTTCAGCAGATTCCCAGACCCGGAGAGGCGGTaGGCGAAGGTTCCTCTACGCGATCCCCCTGCCGCGCCCCACATC +
Preference number: 5 (lower is better)
Translates to: RRGKEFSRFPDPERR*AKVPLRDPPAAPHI
Trigger: GATGTGGGGCGCGGCAGGGGGATCGCGTAGAGGAACCTTCGCGCACCGCCTCTCCGGGTCTGGGAATCTGCTGAACTCCTTGCCTCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464301.1
CDS CCA 90 bp ACGTCATGTTGCTCGCGCCCTGGCAAGGCCCCCGCCCTTCTTAGCTaGGGCGTTCGAGGGACCCCAGGAGAGGCAAGGAGTTCAGCAGAT +
Preference number: 5 (lower is better)
Translates to: TSCCSRPGKAPALLS*GVRGTPGEARSSAD
Trigger: ATCTGCTGAACTCCTTGCCTCTCCTGGGGTCCCTCGAACGCCCCAGCTAAGAAGGGCGGGGGCCTTGCCAGGGCGCGAGCAACATGACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464301.1
CDS GCA 90 bp CCGGCTGCACCAAATCGTGTATTCACCAAAGCAGACTGCGCTAACTaGGTCGCAGAAACCGGCGCGTCTGACACCCTGCTACGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: PAAPNRVFTKADCAN*VAETGASDTLLRLR
Trigger: CCGCAAGCGTAGCAGGGTGTCAGACGCGCCGGTTTCTGCGACGCAGTTAGCGCAGTCTGCTTTGGTGAATACACGATTTGGTGCAGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412905.1
ENST00000430412.5
CDS CCA 90 bp GGCTCCGCGCTAGTTTTGTTCCAAGAAAGAACGCCGCGGGGGAGTTaGGGCGGCTTCTTAACGCATGCGTGGAGCGCCCTTTATCATTCG +
Preference number: 5 (lower is better)
Translates to: GSALVLFQERTPRGS*GGFLTHAWSALYHS
Trigger: CGAATGATAAAGGGCGCTCCACGCATGCGTTAAGAAGCCGCCCCAACTCCCCCGCGGCGTTCTTTCTTGGAACAAAACTAGCGCGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS GCA 90 bp TACCAAACCCCGGCTGCACCAAATCGTGTATTCACCAAAGCAGACTaGGCTAACTGCGTCGCAGAAACCGGCGCGTCTGACACCCTGCTA +
Preference number: 5 (lower is better)
Translates to: YQTPAAPNRVFTKAD*ANCVAETGASDTLL
Trigger: TAGCAGGGTGTCAGACGCGCCGGTTTCTGCGACGCAGTTAGCGCAGTCTGCTTTGGTGAATACACGATTTGGTGCAGCCGGGGTTTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412905.1
ENST00000430412.5
CDS-3UTR CAA 90 bp AAGACCCCTACGTGCAGGGAAAACAGTACTAAGCACCAGCCTCTTGTGGTTAGGGACACCCTGCTACGCTaGCGGCGTACAAGGTCCACT +
Preference number: 5 (lower is better)
Translates to: KTPTCRENSTKHQPLVVRDTLLR*RRTRST
Trigger: AGTGGACCTTGTACGCCGCAAGCGTAGCAGGGTGTC...CCTAACCACAAGAGGCTGGTGCTTAGTACTGTTTTCCCTGCACGTAGGGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS GCA 90 bp CTTCCAACGGAGGGCTTCAGGTTCTGCAGTGATATTTCTTCCTCGTaGCAGATCCTTAGTACAGCCCATGTGGACAGGCTCCCACGTGAA +
Preference number: 5 (lower is better)
Translates to: LPTEGFRFCSDISSS*QILSTAHVDRLPRE
Trigger: TTCACGTGGGAGCCTGTCCACATGGGCTGTACTAAGGATCTGGCACGAGGAAGAAATATCACTGCAGAACCTGAAGCCCTCCGTTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464301.1
CDS-3UTR CAA 90 bp AAGACCCCTACGTGCAGGGAAAACAGTACTAAGCACCAGCCTCTTGTGGTTAGGAGCCCATCACTGAAGTaGTGGATGCCATCCCCCATG +
Preference number: 5 (lower is better)
Translates to: KTPTCRENSTKHQPLVVRSPSLK*WMPSPM
Trigger: CATGGGGGATGGCATCCACAACTTCAGTGATGGGCT...CCTAACCACAAGAGGCTGGTGCTTAGTACTGTTTTCCCTGCACGTAGGGGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTAACGCCGCGGGGGAGTaGGGGCGGCTTCTTAACGCA +
Preference number: 5 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVNAAGE*GRLLNA
Trigger: TGCGTTAAGAAGCCGCCCCAACTCCCCCGCGGCGTT...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS GCA 90 bp CATTACGTTCTTCATTTCTATTTTTCCTCACACTCGAGTGCCGTGTaGATCTCCTCTCCGCTCGGTACCAAACCCCGGCTGCACCAAATC +
Preference number: 5 (lower is better)
Translates to: HYVLHFYFSSHSSAV*ISSPLGTKPRLHQI
Trigger: GATTTGGTGCAGCCGGGGTTTGGTACCGAGCGGAGAGGAGATGCACACGGCACTCGAGTGTGAGGAAAAATAGAAATGAAGAACGTAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS CCA 90 bp CATTCGCCTTTTCTCCTGGCTTTCGAACGTCGGTTGCTGAGGCCTTaGGCAAGGCGAATGAGTAATGGAAGCTCTAAACCCAAACGCTTT +
Preference number: 5 (lower is better)
Translates to: HSPFLLAFERRLLRP*ARRMSNGSSKPKRF
Trigger: AAAGCGTTTGGGTTTAGAGCTTCCATTACTCATTCGCCTTGCCCAAGGCCTCAGCAACCGACGTTCGAAAGCCAGGAGAAAAGGCGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS-3UTR CAA 90 bp AAGACCCCTACGTGCAGGGAAAACAGTACTAAGCACCAGCCTCTTGTGGTTAGGCATCTTCCAAGTCACTaGGGTACCATGACAGCCATG +
Preference number: 5 (lower is better)
Translates to: KTPTCRENSTKHQPLVVRHLPSH*GTMTAM
Trigger: CATGGCTGTCATGGTACCCAAGTGACTTGGAAGATG...CCTAACCACAAGAGGCTGGTGCTTAGTACTGTTTTCCCTGCACGTAGGGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp AAGACCCCTACGTGCAGGGAAAACAGTACTAAGCACCAGCCTCTTGTGGTTAGGCTAAGCACCAGCCTCTaGTGGTTAGGCTCAAATCTA +
Preference number: 5 (lower is better)
Translates to: KTPTCRENSTKHQPLVVRLSTSL*WLGSNL
Trigger: TAGATTTGAGCCTAACCACAAGAGGCTGGTGCTTAG...CCTAACCACAAGAGGCTGGTGCTTAGTACTGTTTTCCCTGCACGTAGGGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS CCA 90 bp GCAGTGATATTTCTTCCTCGTGCCAGATCCTTAGTACAGCCCATGTaGACAGGCTCCCACGTGAACATTTCTTTACAGAAGCCACAGGAA +
Preference number: 5 (lower is better)
Translates to: AVIFLPRARSLVQPM*TGSHVNISLQKPQE
Trigger: TTCCTGTGGCTTCTGTAAAGAAATGTTCACGTGGGAGCCTGTCCACATGGGCTGTACTAAGGATCTGGCACGAGGAAGAAATATCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464301.1
CDS-3UTR CAA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTAGCCCATCACTGAAGTaGTGGATGCCATCCCCCATG +
Preference number: 5 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVSPSLK*WMPSPM
Trigger: CATGGGGGATGGCATCCACAACTTCAGTGATGGGCT...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTGGCTCCGCGCTAGTTTaGTTCCAAGAAAGAACGCCG +
Preference number: 5 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVGSALV*FQERTP
Trigger: CGGCGTTCTTTCTTGGAACAAAACTAGCGCGGAGCC...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS TCA 90 bp GAAAATTTGCTTGGCTCCAATTCTGTCATTCCACGATGCTGTCTGTaGAGCGCTTCAGGGCCATGGTCATGTTCTTCATGGCAATGGTTG +
Preference number: 5 (lower is better)
Translates to: ENLLGSNSVIPRCCL*SASGPWSCSSWQWL
Trigger: CAACCATTGCCATGAAGAACATGACCATGGCCCTGAAGCGCTTCACAGACAGCATCGTGGAATGACAGAATTGGAGCCAAGCAAATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000418005.1
ENST00000458054.1
CDS-3UTR CAA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTTCTGTTGAAGGTTCATaGCTAGGCTCCCCACGCTCA +
Preference number: 5 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVSVEGS*LGSPRS
Trigger: TGAGCGTGGGGAGCCTAGCAATGAACCTTCAACAGA...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CAA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGGCAAGAGGCTTGAGTaGAAGCCAGTCAGAATCTGG +
Preference number: 5 (lower is better)
Translates to: APKRLIPIRHQQHILAQDGKRLE*KPVRIW
Trigger: CCAGATTCTGACTGGCTTCAACTCAAGCCTCTTGCC...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp CTGTTTCTTTCAGATCGGATCCAGAATGACAGGGGCCATGGGAATGATGAGAATTTCCTCAGCACAGTTTaGTTCTCGCCGTGGTGGTTA +
Preference number: 5 (lower is better)
Translates to: LFLSDRIQNDRGHGNDENFLSTV*FSPWWL
Trigger: TAACCACCACGGCGAGAACAAAACTGTGCTGAGGAA...ATTCTCATCATTCCCATGGCCCCTGTCATTCTGGATCCGATCTGAAAGAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CAA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGGCTTTCGAACGTCGGTaGCTGAGGCCTTGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: TLAIIYKYLDACAALKVLAFERR*LRPWAR
Trigger: CCTTGCCCAAGGCCTCAGCAACCGACGTTCGAAAGC...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS-3UTR CAA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTTTCCTCAGCACAGTTTaGTTCTCGCCGTGGTGGTTA +
Preference number: 5 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVFLSTV*FSPWWL
Trigger: TAACCACCACGGCGAGAACAAAACTGTGCTGAGGAA...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATAGCCCATCACTGAAGTaGTGGATGCCATCCCCCATG +
Preference number: 5 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNSPSLK*WMPSPM
Trigger: CATGGGGGATGGCATCCACAACTTCAGTGATGGGCT...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS CCA 90 bp ATCAAGATCTTGGTGTCCACGACCAGGATCATGACCATTACGTTCTaGAAGATGTACATGAGAATGACCTGGGTTATGTACACGATCAGG +
Preference number: 5 (lower is better)
Translates to: IKILVSTTRIMTITF*KMYMRMTWVMYTIR
Trigger: CCTGATCGTGTACATAACCCAGGTCATTCTCATGTACATCTTCCAGAACGTAATGGTCATGATCCTGGTCGTGGACACCAAGATCTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000465851.1
CDS-3UTR CAA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAATCTGTTGAAGGTTCATaGCTAGGCTCCCCACGCTCA +
Preference number: 5 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQSVEGS*LGSPRS
Trigger: TGAGCGTGGGGAGCCTAGCAATGAACCTTCAACAGA...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CAA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCATCAGGATCAAGATCTaGGTGTCCACGACCAGGATC +
Preference number: 5 (lower is better)
Translates to: VHTVQGTDAKLHGNILVIIRIKI*VSTTRI
Trigger: GATCCTGGTCGTGGACACCAAGATCTTGATCCTGAT...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp AAGACCCCTACGTGCAGGGAAAACAGTACTAAGCACCAGCCTCTTGTGGTTAGGGAATTTGAAGCATCCTaGGTTAATGATAGGAACCAA +
Preference number: 5 (lower is better)
Translates to: KTPTCRENSTKHQPLVVREFEAS*VNDRNQ
Trigger: TTGGTTCCTATCATTAACCAAGGATGCTTCAAATTC...CCTAACCACAAGAGGCTGGTGCTTAGTACTGTTTTCCCTGCACGTAGGGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCGGGCGTCTCCACTCATaGTTCCTACAGCTAATGCAA +
Preference number: 5 (lower is better)
Translates to: VHTVQGTDAKLHGNILVIGRLHS*FLQLMQ
Trigger: TTGCATTAGCTGTAGGAACAATGAGTGGAGACGCCC...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCATGCCCATGTGCATGTaGGTGACTGTGATCATGTCC +
Preference number: 5 (lower is better)
Translates to: VHTVQGTDAKLHGNILVIMPMCM*VTVIMS
Trigger: GGACATGATCACAGTCACCAACATGCACATGGGCAT...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp ATCACGCCTAGCAAGGAAAGCAGGCTAATGACAGTGATAGAAATGATACCACAAATGCCCATGTGCATGTaGGTGACTGTGATCATGTCC +
Preference number: 5 (lower is better)
Translates to: ITPSKESRLMTVIEMIPQMPMCM*VTVIMS
Trigger: GGACATGATCACAGTCACCAACATGCACATGGGCAT...TTGTGGTATCATTTCTATCACTGTCATTAGCCTGCTTTCCTTGCTAGGCGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CAA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTATTCTGAAGGATGAATaGCCCCACAGGACAAAAGCC +
Preference number: 5 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVILKDE*PHRTKA
Trigger: GGCTTTTGTCCTGTGGGGCAATTCATCCTTCAGAAT...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATCTAAGCACCAGCCTCTaGTGGTTAGGCTCAAATCTA +
Preference number: 5 (lower is better)
Translates to: APKRLIPIRHQQHILAQDLSTSL*WLGSNL
Trigger: TAGATTTGAGCCTAACCACAAGAGGCTGGTGCTTAG...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATCCACGACATGTGCTCTaGGTTCCAGTGCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNPRHVL*VPVPNW
Trigger: CCAGTTTGGCACTGGAACCAAGAGCACATGTCGTGG...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp CTAATGACAGTGATAGAAATGATACCACAAATCCAGGCTGATGCCCCTATATTTGGCTCCGCGCTAGTTTaGTTCCAAGAAAGAACGCCG +
Preference number: 5 (lower is better)
Translates to: LMTVIEMIPQIQADAPIFGSALV*FQERTP
Trigger: CGGCGTTCTTTCTTGGAACAAAACTAGCGCGGAGCC...AAATATAGGGGCATCAGCCTGGATTTGTGGTATCATTTCTATCACTGTCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444421.5
CDS TCA 90 bp ACACGATCAGGTTTGTGGACCCGATTATGCTCATACTGTTCACCCTaGTCATGGTTAGGGGGAAAACCTGGTGTAATAACCTCAGAATTT +
Preference number: 5 (lower is better)
Translates to: TRSGLWTRLCSYCSP*SWLGGKPGVITSEF
Trigger: AAATTCTGAGGTTATTACACCAGGTTTTCCCCCTAACCATGATCAGGGTGAACAGTATGAGCATAATCGGGTCCACAAACCTGATCGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000465851.1
CDS-3UTR CAA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATGGGCGTCTCCACTCATaGTTCCTACAGCTAATGCAA +
Preference number: 5 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNGRLHS*FLQLMQ
Trigger: TTGCATTAGCTGTAGGAACAATGAGTGGAGACGCCC...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGCAAGAGGCTTGAGTaGAAGCCAGTCAGAATCTGG +
Preference number: 5 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNGKRLE*KPVRIW
Trigger: CCAGATTCTGACTGGCTTCAACTCAAGCCTCTTGCC...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCGGCAAGAGGCTTGAGTaGAAGCCAGTCAGAATCTGG +
Preference number: 5 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITGKRLE*KPVRIW
Trigger: CCAGATTCTGACTGGCTTCAACTCAAGCCTCTTGCC...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTAAGCCATGTTCTTCATaGTCACCATCACCATGCAAC +
Preference number: 5 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVKPCSS*SPSPCN
Trigger: GTTGCATGGTGATGGTGACAATGAAGAACATGGCTT...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp CCAGGCTATATTAGCTATTCCTGTTTCTTTCAGATCGGATCCAGAATGACAGGGAAGCCATGTTCTTCATaGTCACCATCACCATGCAAC +
Preference number: 5 (lower is better)
Translates to: PGYISYSCFFQIGSRMTGKPCSS*SPSPCN
Trigger: GTTGCATGGTGATGGTGACAATGAAGAACATGGCTT...CCCTGTCATTCTGGATCCGATCTGAAAGAAACAGGAATAGCTAATATAGCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CAA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTGCCACTGACTTTCCTTaGAGCAATGTGCATACAGTA +
Preference number: 5 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVATDFP*SNVHTV
Trigger: TACTGTATGCACATTGCTCAAAGGAAAGTCAGTGGC...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCCACCTTTTAGCTAGGTaGCTTGAAGGGCCAAGCAAT +
Preference number: 5 (lower is better)
Translates to: VHTVQGTDAKLHGNILVIHLLAR*LEGPSN
Trigger: ATTGCTTGGCCCTTCAAGCAACCTAGCTAAAAGGTG...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS TCA 90 bp CCTTCATTATCAGGATCAAGATCTTGGTGTCCACGACCAGGATCATaGCCATTACGTTCTTCATTTCTATTTTTCCTCACACTCGAGTGC +
Preference number: 5 (lower is better)
Translates to: PSLSGSRSWCPRPGS*PLRSSFLFFLTLEC
Trigger: GCACTCGAGTGTGAGGAAAAATAGAAATGAAGAACGTAATGGTCATGATCCTGGTCGTGGACACCAAGATCTTGATCCTGATAATGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS CCA 90 bp AGGATCATGACCATTACGTTCTGGAAGATGTACATGAGAATGACCTaGGTTATGTACACGATCAGGTTTGTGGACCCGATTATGCTCATA +
Preference number: 5 (lower is better)
Translates to: RIMTITFWKMYMRMT*VMYTIRFVDPIMLI
Trigger: TATGAGCATAATCGGGTCCACAAACCTGATCGTGTACATAACCCAGGTCATTCTCATGTACATCTTCCAGAACGTAATGGTCATGATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000465851.1
CDS-3UTR CAA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCATCAGGATCAAGATCTaGGTGTCCACGACCAGGATC +
Preference number: 5 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITIRIKI*VSTTRI
Trigger: GATCCTGGTCGTGGACACCAAGATCTTGATCCTGAT...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp CTAATGACAGTGATAGAAATGATACCACAAATCCAGGCTGATGCCCCTATATTTATCAGGATCAAGATCTaGGTGTCCACGACCAGGATC +
Preference number: 5 (lower is better)
Translates to: LMTVIEMIPQIQADAPIFIRIKI*VSTTRI
Trigger: GATCCTGGTCGTGGACACCAAGATCTTGATCCTGAT...AAATATAGGGGCATCAGCCTGGATTTGTGGTATCATTTCTATCACTGTCATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430412.5
ENST00000444421.5
CDS-3UTR CAA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGATGCCCATGTGCATGTaGGTGACTGTGATCATGTCC +
Preference number: 5 (lower is better)
Translates to: TLAIIYKYLDACAALKVLMPMCM*VTVIMS
Trigger: GGACATGATCACAGTCACCAACATGCACATGGGCAT...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATTTCCTCAGCACAGTTTaGTTCTCGCCGTGGTGGTTA +
Preference number: 5 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNFLSTV*FSPWWL
Trigger: TAACCACCACGGCGAGAACAAAACTGTGCTGAGGAA...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTGTTGTATACAATTGCTaGCTTTACAGTCATGCCTGC +
Preference number: 5 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVVVYNC*LYSHAC
Trigger: GCAGGCATGACTGTAAAGCAAGCAATTGTATACAAC...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp GCACCTAAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGGAGGTTGTATACAATaGCTTGCTTTACAGTCATGC +
Preference number: 5 (lower is better)
Translates to: APKRLIPIRHQQHILAQDGGCIQ*LALQSC
Trigger: GCATGACTGTAAAGCAAGCAATTGTATACAACCTCC...ATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTTAGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATATTCTGAAGGATGAATaGCCCCACAGGACAAAAGCC +
Preference number: 5 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNILKDE*PHRTKA
Trigger: GGCTTTTGTCCTGTGGGGCAATTCATCCTTCAGAAT...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCGCCACTGACTTTCCTTaGAGCAATGTGCATACAGTA +
Preference number: 5 (lower is better)
Translates to: VHTVQGTDAKLHGNILVIATDFP*SNVHTV
Trigger: TACTGTATGCACATTGCTCAAAGGAAAGTCAGTGGC...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTCCACGACATGTGCTCTaGGTTCCAGTGCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTPRHVL*VPVPNW
Trigger: CCAGTTTGGCACTGGAACCAAGAGCACATGTCGTGG...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACCCACGACATGTGCTCTaGGTTCCAGTGCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHPRHVL*VPVPNW
Trigger: CCAGTTTGGCACTGGAACCAAGAGCACATGTCGTGG...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGCATCTTCCAAGTCACTaGGGTACCATGACAGCCATG +
Preference number: 5 (lower is better)
Translates to: TLAIIYKYLDACAALKVLHLPSH*GTMTAM
Trigger: CATGGCTGTCATGGTACCCAAGTGACTTGGAAGATG...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS CCA 90 bp GATCATGACCATTACGTTCTTCATTTCTATTTTTCGGATTCCACATaGATCGTCCGAGGAATAGGAAATTCAAGTCTACGCAAACTGCGG +
Preference number: 5 (lower is better)
Translates to: DHDHYVLHFYFSDST*IVRGIGNSSLRKLR
Trigger: CCGCAGTTTGCGTAGACTTGAATTTCCTATTCCTCGGACGATCCATGTGGAATCCGAAAAATAGAAATGAAGAACGTAATGGTCATGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444421.5
CDS-3UTR CAA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCTGTTCCTGGGTTTTATaGGTCTCTGTTGAAGGTTCA +
Preference number: 5 (lower is better)
Translates to: VHTVQGTDAKLHGNILVICSWVL*VSVEGS
Trigger: TGAACCTTCAACAGAGACCAATAAAACCCAGGAACA...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CAA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGTGTACACGATCAGGTTaGTGGACCCGATTATGCTCA +
Preference number: 5 (lower is better)
Translates to: TLAIIYKYLDACAALKVLCTRSG*WTRLCS
Trigger: TGAGCATAATCGGGTCCACAAACCTGATCGTGTACA...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CAA 90 bp GTGCATACAGTACAAGGAACAGATGCAAAGCTGCATGGTAACATTCTCGTAATCGGAGGTTGTATACAATaGCTTGCTTTACAGTCATGC +
Preference number: 5 (lower is better)
Translates to: VHTVQGTDAKLHGNILVIGGCIQ*LALQSC
Trigger: GCATGACTGTAAAGCAAGCAATTGTATACAACCTCC...GATTACGAGAATGTTACCATGCAGCTTTGCATCTGTTCCTTGTACTGTATGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATGCCACTGACTTTCCTTaGAGCAATGTGCATACAGTA +
Preference number: 5 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNATDFP*SNVHTV
Trigger: TACTGTATGCACATTGCTCAAAGGAAAGTCAGTGGC...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp GAAAGGTCAAAACTGGATGTCAAACACAATTTTATCTTCATAGAGGGCAATCACCATCTTCCAAGTCACTaGGGTACCATGACAGCCATG +
Preference number: 5 (lower is better)
Translates to: ERSKLDVKHNFIFIEGNHHLPSH*GTMTAM
Trigger: CATGGCTGTCATGGTACCCAAGTGACTTGGAAGATG...GTGATTGCCCTCTATGAAGATAAAATTGTGTTTGACATCCAGTTTTGACCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CAA 90 bp CATGGTAAACTTCGATTTTCTGCTTTACAACCTTGTAGCCAGCCACGACATGTGTTAGCAAGAATCACCTaGCAGGACCATAATCACATT +
Preference number: 5 (lower is better)
Translates to: HGKLRFSALQPCSQPRHVLARIT*QDHNHI
Trigger: AATGTGATTATGGTCCTGCAAGGTGATTCTTGCTAA...CACATGTCGTGGCTGGCTACAAGGTTGTAAAGCAGAAAATCGAAGTTTACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS TCA 90 bp CCTTCATTATCAGGATCAAGATCTTGGTGTCCACGACCAGGATCATaGCCATTACGTTCTTCATTTCTATTTTTCGGATTCCACATGGAT +
Preference number: 5 (lower is better)
Translates to: PSLSGSRSWCPRPGS*PLRSSFLFFGFHMD
Trigger: ATCCATGTGGAATCCGAAAAATAGAAATGAAGAACGTAATGGTCATGATCCTGGTCGTGGACACCAAGATCTTGATCCTGATAATGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444421.5
CDS-3UTR CAA 90 bp AAAAGACTAATCCCTATCAGGCACCAACAGCATATCTTGGCACAAGATGATCAAGCTTGCTTTGAAAATTaGCTTGGCTCCAATTCTGTC +
Preference number: 5 (lower is better)
Translates to: KRLIPIRHQQHILAQDDQACFEN*LGSNSV
Trigger: GACAGAATTGGAGCCAAGCAAATTTTCAAAGCAAGC...TTGATCATCTTGTGCCAAGATATGCTGTTGGTGCCTGATAGGGATTAGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CAA 90 bp AATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGGAGTTATTTATGGTTTCTTTTaGTGGATACACTGGTCACAG +
Preference number: 5 (lower is better)
Translates to: NASSKSLGYHDSHGNNGVIYGFF*WIHWSQ
Trigger: CTGTGACCAGTGTATCCACAAAAAGAAACCATAAAT...AACTCCATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CAA 90 bp CCAGGCTATATTAGCTATTCCTGTTTCTTTCAGATCGGATCCAGAATGACAGGGGAATTTGAAGCATCCTaGGTTAATGATAGGAACCAA +
Preference number: 5 (lower is better)
Translates to: PGYISYSCFFQIGSRMTGEFEAS*VNDRNQ
Trigger: TTGGTTCCTATCATTAACCAAGGATGCTTCAAATTC...CCCTGTCATTCTGGATCCGATCTGAAAGAAACAGGAATAGCTAATATAGCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CAA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACGGGCGTCTCCACTCATaGTTCCTACAGCTAATGCAA +
Preference number: 5 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHGRLHS*FLQLMQ
Trigger: TTGCATTAGCTGTAGGAACAATGAGTGGAGACGCCC...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp TCAAAACTGGATGTCAAACACAATTTTATCTTCATAGAGGGCAATCACCAGCATATTCTGAAGGATGAATaGCCCCACAGGACAAAAGCC +
Preference number: 5 (lower is better)
Translates to: SKLDVKHNFIFIEGNHQHILKDE*PHRTKA
Trigger: GGCTTTTGTCCTGTGGGGCAATTCATCCTTCAGAAT...ATGCTGGTGATTGCCCTCTATGAAGATAAAATTGTGTTTGACATCCAGTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CAA 90 bp GAAAGGTCAAAACTGGATGTCAAACACAATTTTATCTTCATAGAGGGCAATCACCTAAGCACCAGCCTCTaGTGGTTAGGCTCAAATCTA +
Preference number: 5 (lower is better)
Translates to: ERSKLDVKHNFIFIEGNHLSTSL*WLGSNL
Trigger: TAGATTTGAGCCTAACCACAAGAGGCTGGTGCTTAG...GTGATTGCCCTCTATGAAGATAAAATTGTGTTTGACATCCAGTTTTGACCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CAA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCCACCAACAGCATATCTaGGCACAAGATGATCAAGTG +
Preference number: 5 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITHQQHI*AQDDQV
Trigger: CACTTGATCATCTTGTGCCAAGATATGCTGTTGGTG...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGCAGCAGCTACACTGGTaGCCAAGCAGATTAAAACAA +
Preference number: 5 (lower is better)
Translates to: TLAIIYKYLDACAALKVLQQLHW*PSRLKQ
Trigger: TTGTTTTAATCTGCTTGGCAACCAGTGTAGCTGCTG...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCCAGCAGCTACACTGGTaGCCAAGCAGATTAAAACAA +
Preference number: 5 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITQQLHW*PSRLKQ
Trigger: TTGTTTTAATCTGCTTGGCAACCAGTGTAGCTGCTG...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGTGTTCCTGGGTTTTATaGGTCTCTGTTGAAGGTTCA +
Preference number: 5 (lower is better)
Translates to: TLAIIYKYLDACAALKVLCSWVL*VSVEGS
Trigger: TGAACCTTCAACAGAGACCAATAAAACCCAGGAACA...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CAA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTTGTACACGATCAGGTTaGTGGACCCGATTATGCTCA +
Preference number: 5 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTCTRSG*WTRLCS
Trigger: TGAGCATAATCGGGTCCACAAACCTGATCGTGTACA...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CAA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATGTTGTATACAATTGCTaGCTTTACAGTCATGCCTGC +
Preference number: 5 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNVVYNC*LYSHAC
Trigger: GCAGGCATGACTGTAAAGCAAGCAATTGTATACAAC...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCGGAGGTTGTATACAATaGCTTGCTTTACAGTCATGC +
Preference number: 5 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITGGCIQ*LALQSC
Trigger: GCATGACTGTAAAGCAAGCAATTGTATACAACCTCC...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp GTATACAATTGCTTGCTTTACAGTCATGCCTGCTTTAAGAAGAACTGCAAAATCCACCAACAGCATATCTaGGCACAAGATGATCAAGTG +
Preference number: 5 (lower is better)
Translates to: VYNCLLYSHACFKKNCKIHQQHI*AQDDQV
Trigger: CACTTGATCATCTTGTGCCAAGATATGCTGTTGGTG...GATTTTGCAGTTCTTCTTAAAGCAGGCATGACTGTAAAGCAAGCAATTGTATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS-3UTR CAA 90 bp GCTACACTGGTTGCCAAGCAGATTAAAACAAAGCTAGCTGCACATAGTTCAAATTTAGCAAGAATCACCTaGCAGGACCATAATCACATT +
Preference number: 5 (lower is better)
Translates to: ATLVAKQIKTKLAAHSSNLARIT*QDHNHI
Trigger: AATGTGATTATGGTCCTGCAAGGTGATTCTTGCTAA...ATTTGAACTATGTGCAGCTAGCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACAAGCCATGTTCTTCATaGTCACCATCACCATGCAAC +
Preference number: 5 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHKPCSS*SPSPCN
Trigger: GTTGCATGGTGATGGTGACAATGAAGAACATGGCTT...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTCAGCAGCTACACTGGTaGCCAAGCAGATTAAAACAA +
Preference number: 5 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTQQLHW*PSRLKQ
Trigger: TTGTTTTAATCTGCTTGGCAACCAGTGTAGCTGCTG...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp AATTTAAATGCATCTTCCAAGTCACTTGGGTACCATGACAGCCATGGCAATAATTTAGCAAGAATCACCTaGCAGGACCATAATCACATT +
Preference number: 5 (lower is better)
Translates to: NLNASSKSLGYHDSHGNNLARIT*QDHNHI
Trigger: AATGTGATTATGGTCCTGCAAGGTGATTCTTGCTAA...ATTATTGCCATGGCTGTCATGGTACCCAAGTGACTTGGAAGATGCATTTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACGCTTGCTTTGAAAATTaGCTTGGCTCCAATTCTGTC +
Preference number: 5 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHACFEN*LGSNSV
Trigger: GACAGAATTGGAGCCAAGCAAATTTTCAAAGCAAGC...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CAA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACCTCCAAGGCCCAAGTTaGTTAAAAGTTTCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHLQGPS*LKVSPN
Trigger: GTTTGGAGAAACTTTTAACAAACTTGGGCCTTGGAG...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CAA 90 bp ACACTGGCAATAATCTATAAATACCTGGATGCATGTGCTGCTCTCAAAGTTTTGATTTATGGTTTCTTTTaGTGGATACACTGGTCACAG +
Preference number: 5 (lower is better)
Translates to: TLAIIYKYLDACAALKVLIYGFF*WIHWSQ
Trigger: CTGTGACCAGTGTATCCACAAAAAGAAACCATAAAT...CAAAACTTTGAGAGCAGCACATGCATCCAGGTATTTATAGATTATTGCCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359634.10
ENST00000409086.7
CDS-3UTR CAA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACGTTGTATACAATTGCTaGCTTTACAGTCATGCCTGC +
Preference number: 5 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHVVYNC*LYSHAC
Trigger: GCAGGCATGACTGTAAAGCAAGCAATTGTATACAAC...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp TCCTATGTCTACTTTATGCAGTTTCAAAGTTGTGTCAAGTTGATCCCTATCACCTATGCAGTTTCAAAGTaGTGTCAAGTTGATCCCTAT +
Preference number: 5 (lower is better)
Translates to: SYVYFMQFQSCVKLIPITYAVSK*CQVDPY
Trigger: ATAGGGATCAACTTGACACAACTTTGAAACTGCATA...GGTGATAGGGATCAACTTGACACAACTTTGAAACTGCATAAAGTAGACATAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp TTATTTTGGAGGAGTTCCATAAGCATTAGGAACATACATAAAATGACACACCACCAGGATAAACATGGCTaGCACTTCTCACAAATCATT +
Preference number: 5 (lower is better)
Translates to: LFWRSSISIRNIHKMTHHQDKHG*HFSQII
Trigger: AATGATTTGTGAGAAGTGCAAGCCATGTTTATCCTG...GTGGTGTGTCATTTTATGTATGTTCCTAATGCTTATGGAACTCCTCCAAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp AGGAATGTTGGAGCCAAAAGAAATGTAGTGGAATTCAGATTGTCTATTAAGACTGAATTTGAAGCATCCTaGGTTAATGATAGGAACCAA +
Preference number: 5 (lower is better)
Translates to: RNVGAKRNVVEFRLSIKTEFEAS*VNDRNQ
Trigger: TTGGTTCCTATCATTAACCAAGGATGCTTCAAATTC...AGTCTTAATAGACAATCTGAATTCCACTACATTTCTTTTGGCTCCAACATTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS-3UTR CAA 90 bp CTTCATGTACACATTACAGACATGGTAAACTTCGATTTTCTGCTTTACAACCTTTATGCAGTTTCAAAGTaGTGTCAAGTTGATCCCTAT +
Preference number: 5 (lower is better)
Translates to: LHVHITDMVNFDFLLYNLYAVSK*CQVDPY
Trigger: ATAGGGATCAACTTGACACAACTTTGAAACTGCATA...AAGGTTGTAAAGCAGAAAATCGAAGTTTACCATGTCTGTAATGTGTACATGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
CDS GCA 72 bp CAGACCGCACACGAGGAGCCGCGGCGCCCAACACTCTaGCCACCACGCGCTCTGCTTCGGCTGGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: QTAHEEPRRPTL*PPRALLRLAAA
Trigger: GGCGGCGGCCAGCCGAAGCAGAGCGCGTGGTGGGCAGAGTGTTGGGCGCCGCGGCTCCTCGTGTGCGGTCTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418005.1
CDS GCA 72 bp GAGGCGGTGCGCGAAGGTTCCTCTACGCGATCCCCCTaGCGCGCCCCACATCGCTCTCCACCTCACACTCGA +
Preference number: 6 (lower is better)
Translates to: EAVREGSSTRSP*RAPHRSPPHTR
Trigger: TCGAGTGTGAGGTGGAGAGCGATGTGGGGCGCGGCAGGGGGATCGCGTAGAGGAACCTTCGCGCACCGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464301.1
CDS GCA 72 bp AAGGAGTTCAGCAGATTCCCAGACCCGGAGAGGCGGTaGGCGAAGGTTCCTCTACGCGATCCCCCTGCCGCG +
Preference number: 6 (lower is better)
Translates to: KEFSRFPDPERR*AKVPLRDPPAA
Trigger: CGCGGCAGGGGGATCGCGTAGAGGAACCTTCGCGCACCGCCTCTCCGGGTCTGGGAATCTGCTGAACTCCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464301.1
CDS CAA 72 bp ACGCAAACTGCGGAGTTCCGTGGCTCCGCGCTAGTTTaGTTCCAAGAAAGAACGCCGCGGGGGAGTTGGGGC +
Preference number: 6 (lower is better)
Translates to: TQTAEFRGSALV*FQERTPRGSWG
Trigger: GCCCCAACTCCCCCGCGGCGTTCTTTCTTGGAACAAAACTAGCGCGGAGCCACGGAACTCCGCAGTTTGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS GCA 72 bp CAGCACAAAGAGGATCTCTCACACTCGAGTGCCGTGTaGATCTCCTCTCCGCTCGGTACCAAACCCCGGCTG +
Preference number: 6 (lower is better)
Translates to: QHKEDLSHSSAV*ISSPLGTKPRL
Trigger: CAGCCGGGGTTTGGTACCGAGCGGAGAGGAGATGCACACGGCACTCGAGTGTGAGAGATCCTCTTTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412905.1
CDS GCA 72 bp CCGGCTGCACCAAATCGTGTATTCACCAAAGCAGACTaGGCTAACTGCGTCGCAGAAACCGGCGCGTCTGAC +
Preference number: 6 (lower is better)
Translates to: PAAPNRVFTKAD*ANCVAETGASD
Trigger: GTCAGACGCGCCGGTTTCTGCGACGCAGTTAGCGCAGTCTGCTTTGGTGAATACACGATTTGGTGCAGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412905.1
ENST00000430412.5
CDS CCA 72 bp CTAGTTTTGTTCCAAGAAAGAACGCCGCGGGGGAGTTaGGGCGGCTTCTTAACGCATGCGTGGAGCGCCCTT +
Preference number: 6 (lower is better)
Translates to: LVLFQERTPRGS*GGFLTHAWSAL
Trigger: AAGGGCGCTCCACGCATGCGTTAAGAAGCCGCCCCAACTCCCCCGCGGCGTTCTTTCTTGGAACAAAACTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS CAA 90 bp TTCAAGTCTACGCAAACTGCGGAGTTCCGTGGCTCCGCGCTAGTTTaGTTCCAAGAAAGAACGCCGCGGGGGAGTTGGGGCGGCTTCTTA +
Preference number: 6 (lower is better)
Translates to: FKSTQTAEFRGSALV*FQERTPRGSWGGFL
Trigger: TAAGAAGCCGCCCCAACTCCCCCGCGGCGTTCTTTCTTGGAACAAAACTAGCGCGGAGCCACGGAACTCCGCAGTTTGCGTAGACTTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS GCA 72 bp TGTGCATCTCCTCTCCGCTCGGTACCAAACCCCGGCTaGACCAAATCGTGTATTCACCAAAGCAGACTGCGC +
Preference number: 6 (lower is better)
Translates to: CASPLRSVPNPG*TKSCIHQSRLR
Trigger: GCGCAGTCTGCTTTGGTGAATACACGATTTGGTGCAGCCGGGGTTTGGTACCGAGCGGAGAGGAGATGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412905.1
ENST00000430412.5
CDS GCA 72 bp CCAAATCGTGTATTCACCAAAGCAGACTGCGCTAACTaGGTCGCAGAAACCGGCGCGTCTGACACCCTGCTA +
Preference number: 6 (lower is better)
Translates to: PNRVFTKADCAN*VAETGASDTLL
Trigger: TAGCAGGGTGTCAGACGCGCCGGTTTCTGCGACGCAGTTAGCGCAGTCTGCTTTGGTGAATACACGATTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412905.1
ENST00000430412.5
CDS TCA 72 bp CCTTCTGCAGCTGCCCTTCATTATTCCGTCCACAGCTaGACTCAGAACTGTGAGTGTTCTCCAAGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: PSAAALHYSVHS*TQNCECSPSRS
Trigger: GCTGCGGCTTGGAGAACACTCACAGTTCTGAGTTCAGCTGTGGACGGAATAATGAAGGGCAGCTGCAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458054.1
CDS CAA 90 bp AGCGCCCTTTATCATTCGCCTTTTCTCCTGGCTTTCGAACGTCGGTaGCTGAGGCCTTGGGCAAGGCGAATGAGTAATGGAAGCTCTAAA +
Preference number: 6 (lower is better)
Translates to: SALYHSPFLLAFERR*LRPWARRMSNGSSK
Trigger: TTTAGAGCTTCCATTACTCATTCGCCTTGCCCAAGGCCTCAGCAACCGACGTTCGAAAGCCAGGAGAAAAGGCGAATGATAAAGGGCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS CAA 72 bp TATCATTCGCCTTTTCTCCTGGCTTTCGAACGTCGGTaGCTGAGGCCTTGGGCAAGGCGAATGAGTAATGGA +
Preference number: 6 (lower is better)
Translates to: YHSPFLLAFERR*LRPWARRMSNG
Trigger: TCCATTACTCATTCGCCTTGCCCAAGGCCTCAGCAACCGACGTTCGAAAGCCAGGAGAAAAGGCGAATGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409086.7
CDS TCA 72 bp AACATCAGATTGTTCCTGGGTTTTATTGGTCTCTGTTaGAGGTTCATTGCTAGGCTCCCCACGCTCACTGGG +
Preference number: 6 (lower is better)
Translates to: NIRLFLGFIGLC*RFIARLPTLTG
Trigger: CCCAGTGAGCGTGGGGAGCCTAGCAATGAACCTTCAACAGAGACCAATAAAACCCAGGAACAATCTGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000465851.1
CDS GCA 72 bp TTACGTTCTTCATTTCTATTTTTCCTCACACTCGAGTaGCGTGTGCATCTCCTCTCCGCTCGGTACCAAACC +
Preference number: 6 (lower is better)
Translates to: LRSSFLFFLTLE*RVHLLSARYQT
Trigger: GGTTTGGTACCGAGCGGAGAGGAGATGCACACGGCACTCGAGTGTGAGGAAAAATAGAAATGAAGAACGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS CCA 72 bp TTTCTTCCTCGTGCCAGATCCTTAGTACAGCCCATGTaGACAGGCTCCCACGTGAACATTTCTTTACAGAAG +
Preference number: 6 (lower is better)
Translates to: FLPRARSLVQPM*TGSHVNISLQK
Trigger: CTTCTGTAAAGAAATGTTCACGTGGGAGCCTGTCCACATGGGCTGTACTAAGGATCTGGCACGAGGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464301.1
CDS CAA 72 bp TGTTCCTGGGTTTTATTGGTCTCTGTTGAAGGTTCATaGCTAGGCTCCCCACGCTCACTGGGAGTAATGGAA +
Preference number: 6 (lower is better)
Translates to: CSWVLLVSVEGS*LGSPRSLGVME
Trigger: TTCCATTACTCCCAGTGAGCGTGGGGAGCCTAGCAATGAACCTTCAACAGAGACCAATAAAACCCAGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000465851.1
CDS TCA 72 bp GGTTTGTGGACCCGATTATGCTCATACTGTTCACCCTaGTCATGGTTAGGGGGAAAACCTGGTGTAATAACC +
Preference number: 6 (lower is better)
Translates to: GLWTRLCSYCSP*SWLGGKPGVIT
Trigger: GGTTATTACACCAGGTTTTCCCCCTAACCATGATCAGGGTGAACAGTATGAGCATAATCGGGTCCACAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000465851.1
CDS CAA 90 bp CTCTTTCCTTTCGGTAGTTTAACATCAGATTGTTCCTGGGTTTTATaGGTCTCTGTTGAAGGTTCATTGCTAGGCTCCCCACGCTCACTG +
Preference number: 6 (lower is better)
Translates to: LFPFGSLTSDCSWVL*VSVEGSLLGSPRSL
Trigger: CAGTGAGCGTGGGGAGCCTAGCAATGAACCTTCAACAGAGACCAATAAAACCCAGGAACAATCTGATGTTAAACTACCGAAAGGAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000465851.1
CDS CCA 72 bp TTGGTGTCCACGACCAGGATCATGACCATTACGTTCTaGAAGATGTACATGAGAATGACCTGGGTTATGTAC +
Preference number: 6 (lower is better)
Translates to: LVSTTRIMTITF*KMYMRMTWVMY
Trigger: GTACATAACCCAGGTCATTCTCATGTACATCTTCCAGAACGTAATGGTCATGATCCTGGTCGTGGACACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000465851.1
CDS CAA 72 bp ATGTCGAAGTTCACCTTCATTATCAGGATCAAGATCTaGGTGTCCACGACCAGGATCATGACCATTACGTTC +
Preference number: 6 (lower is better)
Translates to: MSKFTFIIRIKI*VSTTRIMTITF
Trigger: GAACGTAATGGTCATGATCCTGGTCGTGGACACCAAGATCTTGATCCTGATAATGAAGGTGAACTTCGACAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000430412.5
ENST00000444421.5
ENST00000465851.1
CDS CAA 90 bp CTTTCTAGTATGTCGAAGTTCACCTTCATTATCAGGATCAAGATCTaGGTGTCCACGACCAGGATCATGACCATTACGTTCTGGAAGATG +
Preference number: 6 (lower is better)
Translates to: LSSMSKFTFIIRIKI*VSTTRIMTITFWKM
Trigger: CATCTTCCAGAACGTAATGGTCATGATCCTGGTCGTGGACACCAAGATCTTGATCCTGATAATGAAGGTGAACTTCGACATACTAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000465851.1
CDS CAA 72 bp TTCGGTAGTTTAACATCAGATTGTTCCTGGGTTTTATaGGTCTCTGTTGAAGGTTCATTGCTAGGCTCCCCA +
Preference number: 6 (lower is better)
Translates to: FGSLTSDCSWVL*VSVEGSLLGSP
Trigger: TGGGGAGCCTAGCAATGAACCTTCAACAGAGACCAATAAAACCCAGGAACAATCTGATGTTAAACTACCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359634.10
ENST00000409086.7
ENST00000465851.1
CDS TCA 72 bp TCAGGATCAAGATCTTGGTGTCCACGACCAGGATCATaGCCATTACGTTCTTCATTTCTATTTTTCCTCACA +
Preference number: 6 (lower is better)
Translates to: SGSRSWCPRPGS*PLRSSFLFFLT
Trigger: TGTGAGGAAAAATAGAAATGAAGAACGTAATGGTCATGATCCTGGTCGTGGACACCAAGATCTTGATCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430412.5
CDS TCA 72 bp TCAGGATCAAGATCTTGGTGTCCACGACCAGGATCATaGCCATTACGTTCTTCATTTCTATTTTTCGGATTC +
Preference number: 6 (lower is better)
Translates to: SGSRSWCPRPGS*PLRSSFLFFGF
Trigger: GAATCCGAAAAATAGAAATGAAGAACGTAATGGTCATGATCCTGGTCGTGGACACCAAGATCTTGATCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444421.5
CDS CAA 90 bp CTTTCTAGTATGTCGAAGTTCACCTTCATTATCAGGATCAAGATCTaGGTGTCCACGACCAGGATCATGACCATTACGTTCTTCATTTCT +
Preference number: 6 (lower is better)
Translates to: LSSMSKFTFIIRIKI*VSTTRIMTITFFIS
Trigger: AGAAATGAAGAACGTAATGGTCATGATCCTGGTCGTGGACACCAAGATCTTGATCCTGATAATGAAGGTGAACTTCGACATACTAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430412.5
ENST00000444421.5