RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC38A9 (Homo sapiens)

Ensembl gene IDs: ENSG00000177058

Ensembl transcript IDs: ENST00000318672.7, ENST00000396865.7, ENST00000416547.6, ENST00000502247.1, ENST00000502416.5, ENST00000503817.5, ENST00000503891.5, ENST00000504880.5, ENST00000505563.5, ENST00000505708.5, ENST00000506624.5, ENST00000507109.5, ENST00000507216.1, ENST00000508124.5, ENST00000511233.5, ENST00000512208.5, ENST00000512595.5, ENST00000513275.5, ENST00000513993.5, ENST00000514806.5, ENST00000515159.5, ENST00000515629.5, ENST00000515754.1

Found 372 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTCGACCACTGCCCAAAGGAGCCGAAATAATGTCTGCAGACATCTaGATATTCCCAGCTAGTGGTATCCAACGAAAACATCATAGTCCG +
Preference number: 1 (lower is better)
Translates to: TRPLPKGAEIMSADI*IFPASGIQRKHHSP
Trigger: CGGACTATGATGTTTTCGTTGGATACCACTAGCTGGGAATATCCAGATGTCTGCAGACATTATTTCGGCTCCTTTGGGCAGTGGTCGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR GCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTaGAGAAATGGTCTAGTAAGTAAGAAAATGAAAGTGAATACACTG +
Preference number: 1 (lower is better)
Translates to: EVFGLLSQTVEVWAN*RNGLVSKKMKVNTL
Trigger: CAGTGTATTCACTTTCATTTTCTTACTTACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR CCA 90 bp TTTAAAAATGAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTaGGCAAACTGCAGAAATGGTCTAGTAAGTAAGAAAATGAAAGTG +
Preference number: 1 (lower is better)
Translates to: FKNEVFGLLSQTVEV*ANCRNGLVSKKMKV
Trigger: CACTTTCATTTTCTTACTTACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTCATTTTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR TCA 90 bp CCTAACAGTATCTGCCACACCATCCCGCCTAAAGCACTCAGTTTCCCTCTGAGGGGCTGCAGCAAGCCATaGTTGCACCATCACACTCCA +
Preference number: 2 (lower is better)
Translates to: PNSICHTIPPKALSFPLRGCSKP*LHHHTP
Trigger: TGGAGTGTGATGGTGCAATCATGGCTTGCTGCAGCC...CCTCAGAGGGAAACTGAGTGCTTTAGGCGGGATGGTGTGGCAGATACTGTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505563.5
3UTR-3UTR GCA 90 bp TGTCTACCTAACAGTATCTGCCACACCATCCCGCCTAAAGCACTCAGTTTCCCTGCAGCAAGCCATGATTaGACCATCACACTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: CLPNSICHTIPPKALSFPAASHD*TITLQC
Trigger: ACACTGGAGTGTGATGGTGCAATCATGGCTTGCTGC...AGGGAAACTGAGTGCTTTAGGCGGGATGGTGTGGCAGATACTGTTAGGTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505563.5
3UTR-3UTR CCA 90 bp CAGGATGGCCTCCACTCCCGGCACTTGGACAAATCACAGGGTTGCTATTATTGGCAAACAGTAGAGGTTTaGGCAAACTGCAGAAATGGT +
Preference number: 2 (lower is better)
Translates to: QDGLHSRHLDKSQGCYYWQTVEV*ANCRNG
Trigger: ACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTG...CCAATAATAGCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGAGGCCATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR-3UTR TCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGCTGCTCTGACACCCTaGGAATCTTTACTGCAGGCA +
Preference number: 2 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNAALTP*ESLLQA
Trigger: TGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGC...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR TCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTAAAGCAAAACCCAGCATaGTTTCTTCCTAGGGCATAC +
Preference number: 2 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVKQNPA*FLPRAY
Trigger: GTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTT...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR TCA 90 bp TTAGCCACGCCCAAAATGATGATGAAAACGTGGAAGATTAATTTAGGCCATGTCGGTAGAAACAGGCCATaGTCACTCCAGCTCCCACAA +
Preference number: 2 (lower is better)
Translates to: LATPKMMMKTWKINLGHVGRNRP*SLQLPQ
Trigger: TTGTGGGAGCTGGAGTGATCATGGCCTGTTTCTACC...GACATGGCCTAAATTAATCTTCCACGTTTTCATCATCATTTTGGGCGTGGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
3UTR-3UTR GCA 90 bp GAACAGCAGGAATATCCTTGCAATGAAGGACAGGGTGTCACTGCTAGGGAAGTTAGCCGAAATAATGTCTaGAGACATCTGGATATTCCC +
Preference number: 2 (lower is better)
Translates to: EQQEYPCNEGQGVTAREVSRNNV*RHLDIP
Trigger: GGGAATATCCAGATGTCTGCAGACATTATTTCGGCT...AACTTCCCTAGCAGTGACACCCTGTCCTTCATTGCAAGGATATTCCTGCTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR-3UTR CCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTAATGTCTGCAGACATCTaGATATTCCCAGCTAGTGGT +
Preference number: 2 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVMSADI*IFPASG
Trigger: ACCACTAGCTGGGAATATCCAGATGTCTGCAGACAT...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR-3UTR TCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATAAGCAAAACCCAGCATaGTTTCTTCCTAGGGCATAC +
Preference number: 2 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNKQNPA*FLPRAY
Trigger: GTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTT...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR TCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGACAATATGCTGCTCTaGCACCCTGAGAATCTTTAC +
Preference number: 2 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNDNMLL*HPENLY
Trigger: GTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTC...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR TCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTAAACAGAAGCAGGATTTaGCAATATGCTGCTCTGACA +
Preference number: 2 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVNRSRI*QYAALT
Trigger: TGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTT...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR GCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTAGATTTGACAATATGCTaGTCTGACACCCTGAGAATC +
Preference number: 2 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVDLTIC*SDTLRI
Trigger: GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATC...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR TCA 90 bp AGGAATATCCTTGCAATGAAGGACAGGGTGTCACTGCTAGGGAAGTTGTCTAAACTATCATTGCTCCAATaGGAGACACCAAGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: RNILAMKDRVSLLGKLSKLSLLQ*ETPRRK
Trigger: TTTTCTCCTTGGTGTCTCTCATTGGAGCAATGATAG...TTTAGACAACTTCCCTAGCAGTGACACCCTGTCCTTCATTGCAAGGATATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR-3UTR CCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTATTAAGAATCAGCACATaGAAAATGCTGCTTGCACAG +
Preference number: 2 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVLRIST*KMLLAQ
Trigger: CTGTGCAAGCAGCATTTTCCATGTGCTGATTCTTAA...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505708.5
3UTR-3UTR CCA 90 bp ATCACTCCAGCTCCCACAATAATTAGATTAAGAATCAGCACATGGAAAATGCTATCCACTCCCGGCACTTaGACAAATCACAGGGTTGCT +
Preference number: 2 (lower is better)
Translates to: ITPAPTIIRLRISTWKMLSTPGT*TNHRVA
Trigger: AGCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGA...TAGCATTTTCCATGTGCTGATTCTTAATCTAATTATTGTGGGAGCTGGAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR-3UTR TCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTAAGCAAAACCCAGCATaGTTTCTTCCTAGGGCATAC +
Preference number: 2 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTKQNPA*FLPRAY
Trigger: GTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTT...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR TCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCGACAATATGCTGCTCTaGCACCCTGAGAATCTTTAC +
Preference number: 2 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIDNMLL*HPENLY
Trigger: GTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTC...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR TCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACTCCACATGCTGCTCCTaGATATCTTATGATCCCTCC +
Preference number: 2 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDSTCCS*ISYDPS
Trigger: GGAGGGATCATAAGATATTCAGGAGCAGCATGTGGA...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
3UTR-3UTR TCA 90 bp ATCACTCCAGCTCCCACAATAATTAGATTAAGAATCAGCACATGGAAAATGCTAGGAATATCCTTGCAATaGAGGACAGGGTGTCACTGC +
Preference number: 2 (lower is better)
Translates to: ITPAPTIIRLRISTWKMLGISLQ*RTGCHC
Trigger: GCAGTGACACCCTGTCCTTCATTGCAAGGATATTCC...TAGCATTTTCCATGTGCTGATTCTTAATCTAATTATTGTGGGAGCTGGAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR-3UTR GCA 90 bp GGCACTTGGACAAATCACAGGGTTGCTATTATTGGTACTCAGTATAGTGTCTGTGATTTGACAATATGCTaGTCTGACACCCTGAGAATC +
Preference number: 2 (lower is better)
Translates to: GTWTNHRVAIIGTQYSVCDLTIC*SDTLRI
Trigger: GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATC...ACAGACACTATACTGAGTACCAATAATAGCAACCCTGTGATTTGTCCAAGTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR-3UTR TCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACAAGCAAAACCCAGCATaGTTTCTTCCTAGGGCATAC +
Preference number: 2 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDKQNPA*FLPRAY
Trigger: GTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTT...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR GCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCGATTTGACAATATGCTaGTCTGACACCCTGAGAATC +
Preference number: 2 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIDLTIC*SDTLRI
Trigger: GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATC...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR GCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCGAGGTTTGGGCAAACTaGAGAAATGGTCTAGTAAGT +
Preference number: 2 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIEVWAN*RNGLVS
Trigger: ACTTACTAGACCATTTCTGCAGTTTGCCCAAACCTC...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR GCA 90 bp TTAGCCACGCCCAAAATGATGATGAAAACGTGGAAGATTAATTTAGGCCATGTCATCCAGCCTGTTTTATaGCCCAAGGAATGCTTAGTA +
Preference number: 2 (lower is better)
Translates to: LATPKMMMKTWKINLGHVIQPVL*PKECLV
Trigger: TACTAAGCATTCCTTGGGGCATAAAACAGGCTGGAT...GACATGGCCTAAATTAATCTTCCACGTTTTCATCATCATTTTGGGCGTGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR-3UTR GCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATCCAATAAACTATCATTaGTCCAATGAGAGACACCAA +
Preference number: 2 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNPINYH*SNERHQ
Trigger: TTGGTGTCTCTCATTGGAGCAATGATAGTTTATTGG...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR-3UTR CCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACGATCCCTCCTATGTTTaGGTAGAAACAGGCCATGAT +
Preference number: 2 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDDPSYV*VETGHD
Trigger: ATCATGGCCTGTTTCTACCCAAACATAGGAGGGATC...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
3UTR-3UTR TCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACAACAGAAGCAGGATTTaGCAATATGCTGCTCTGACA +
Preference number: 2 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDNRSRI*QYAALT
Trigger: TGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTT...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR TCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTCCTGGGGATTACATTaGCATTACTTTTGTCTCTAC +
Preference number: 2 (lower is better)
Translates to: NIKQKQDLTICCSDTLRISWGLH*HYFCLY
Trigger: GTAGAGACAAAAGTAATGTCAATGTAATCCCCAGGA...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR TCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAATCCACATGCTGCTCCTaGATATCTTATGATCCCTCC +
Preference number: 2 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKSTCCS*ISYDPS
Trigger: GGAGGGATCATAAGATATTCAGGAGCAGCATGTGGA...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
3UTR-3UTR GCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACGAGGTTTGGGCAAACTaGAGAAATGGTCTAGTAAGT +
Preference number: 2 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDEVWAN*RNGLVS
Trigger: ACTTACTAGACCATTTCTGCAGTTTGCCCAAACCTC...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR GCA 90 bp TTCCCTCTGAGGGGGCAACCATCTTACAGTTTCCTATTTACTACCCAAAACTTCGCATACTATACACACTaGTCTGTACTTCAATTTTTC +
Preference number: 2 (lower is better)
Translates to: FPLRGQPSYSFLFTTQNFAYYTH*SVLQFF
Trigger: GAAAAATTGAAGTACAGAGCAGTGTGTATAGTATGC...GAAGTTTTGGGTAGTAAATAGGAAACTGTAAGATGGTTGCCCCCTCAGAGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000505563.5
3UTR-3UTR CCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTATACAGTCATCATCTaGAACAGCAGGAATATCCTT +
Preference number: 2 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIYTVII*NSRNIL
Trigger: AAGGATATTCCTGCTGTTCCAGATGATGACTGTATA...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR-3UTR TCA 90 bp ATCACTCCAGCTCCCACAATAATTAGATTAAGAATCAGCACATGGAAAATGCTATCCTGGGGATTACATTaGCATTACTTTTGTCTCTAC +
Preference number: 2 (lower is better)
Translates to: ITPAPTIIRLRISTWKMLSWGLH*HYFCLY
Trigger: GTAGAGACAAAAGTAATGTCAATGTAATCCCCAGGA...TAGCATTTTCCATGTGCTGATTCTTAATCTAATTATTGTGGGAGCTGGAGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR-3UTR TCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTACTCCTGAATATCTTATaGTCCCTCCTATGTTTGGGT +
Preference number: 2 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLLLNIL*SLLCLG
Trigger: ACCCAAACATAGGAGGGATCATAAGATATTCAGGAG...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
3UTR-3UTR CCA 90 bp CTCTTCTTGGTGGAGGGAAATTATATAGATGAGAGATGGGTATATGAATACAAAATAAGCAGAGCCCAATaGACTATACACATAGCACTC +
Preference number: 2 (lower is better)
Translates to: LFLVEGNYIDERWVYEYKISRAQ*TIHIAL
Trigger: GAGTGCTATGTGTATAGTCCATTGGGCTCTGCTTAT...TTTGTATTCATATACCCATCTCTCATCTATATAATTTCCCTCCACCAAGAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR-3UTR CAA 90 bp GAACAGCAGGAATATCCTTGCAATGAAGGACAGGGTGTCACTGCTAGGGAAGTTAAACAGAAGCAGGATTaGACAATATGCTGCTCTGAC +
Preference number: 3 (lower is better)
Translates to: EQQEYPCNEGQGVTAREVKQKQD*TICCSD
Trigger: GTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT...AACTTCCCTAGCAGTGACACCCTGTCCTTCATTGCAAGGATATTCCTGCTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR-3UTR CAA 90 bp AGGAATATCCTTGCAATGAAGGACAGGGTGTCACTGCTAGGGAAGTTGTCTAAACCAAACAGTAGAGGTTaGGGCAAACTGCAGAAATGG +
Preference number: 3 (lower is better)
Translates to: RNILAMKDRVSLLGKLSKPNSRG*GKLQKW
Trigger: CCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGG...TTTAGACAACTTCCCTAGCAGTGACACCCTGTCCTTCATTGCAAGGATATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR CCA 72 bp CTGCCCAAAGGAGCCGAAATAATGTCTGCAGACATCTaGATATTCCCAGCTAGTGGTATCCAACGAAAACAT +
Preference number: 3 (lower is better)
Translates to: LPKGAEIMSADI*IFPASGIQRKH
Trigger: ATGTTTTCGTTGGATACCACTAGCTGGGAATATCCAGATGTCTGCAGACATTATTTCGGCTCCTTTGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR-3UTR CAA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTAAAACAGAAGCAGGATTaGACAATATGCTGCTCTGAC +
Preference number: 3 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVKQKQD*TICCSD
Trigger: GTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR CAA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATAAACAGAAGCAGGATTaGACAATATGCTGCTCTGAC +
Preference number: 3 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNKQKQD*TICCSD
Trigger: GTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR CAA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATTGTCAGACGCTCTTCTaGGTGGAGGGAAATTATATA +
Preference number: 3 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNCQTLF*VEGNYI
Trigger: TATATAATTTCCCTCCACCAAGAAGAGCGTCTGACA...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
3UTR CCA 72 bp CTCTTCTTGGTGGAGGGAAATTATATAGATGAGAGATaGGTATATGAATACAAAGGCCAGTCCACATGCTGC +
Preference number: 3 (lower is better)
Translates to: LFLVEGNYIDER*VYEYKGQSTCC
Trigger: GCAGCATGTGGACTGGCCTTTGTATTCATATACCCATCTCTCATCTATATAATTTCCCTCCACCAAGAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
3UTR GCA 72 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTaGAGAAATGGTCTAGTAAGTAAGAAAATGAAAGTG +
Preference number: 3 (lower is better)
Translates to: GLLSQTVEVWAN*RNGLVSKKMKV
Trigger: CACTTTCATTTTCTTACTTACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR CCA 72 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTaGGCAAACTGCAGAAATGGTCTAGTAAGTAAGAAA +
Preference number: 3 (lower is better)
Translates to: EVFGLLSQTVEV*ANCRNGLVSKK
Trigger: TTTCTTACTTACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR CAA 90 bp AATCAGCACATGGAAAATGCTAGGATAAATGTCACCGAAGATATGGCCCAAAAGGGACAAATCACAGGGTaGCTATTATTGGTACTCAGT +
Preference number: 3 (lower is better)
Translates to: NQHMENARINVTEDMAQKGQITG*LLLVLS
Trigger: ACTGAGTACCAATAATAGCAACCCTGTGATTTGTCC...CTTTTGGGCCATATCTTCGGTGACATTTATCCTAGCATTTTCCATGTGCTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR-3UTR CAA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACAAACAGAAGCAGGATTaGACAATATGCTGCTCTGAC +
Preference number: 3 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDKQKQD*TICCSD
Trigger: GTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
3UTR-3UTR CAA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATTGTCAGACGCTCTTCTaGGTGGAGGGAAATTATATA +
Preference number: 3 (lower is better)
Translates to: LTICCSDTLRIFTAGKINCQTLF*VEGNYI
Trigger: TATATAATTTCCCTCCACCAAGAAGAGCGTCTGACA...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
3UTR-3UTR CAA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCACAGGGTTGCTATTATaGGTACTCAGTATAGTGTCT +
Preference number: 3 (lower is better)
Translates to: NIKQKQDLTICCSDTLRITGLLL*VLSIVS
Trigger: AGACACTATACTGAGTACCAATAATAGCAACCCTGT...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR-3UTR CAA 90 bp AATCAGCACATGGAAAATGCTAGGATAAATGTCACCGAAGATATGGCCCAAAAGATCCTGGGGATTACATaGACATTACTTTTGTCTCTA +
Preference number: 3 (lower is better)
Translates to: NQHMENARINVTEDMAQKILGIT*TLLLSL
Trigger: TAGAGACAAAAGTAATGTCAATGTAATCCCCAGGAT...CTTTTGGGCCATATCTTCGGTGACATTTATCCTAGCATTTTCCATGTGCTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR TCA 90 bp CCTAACAGTATCTGCCACACCATCCCGCCTAAAGCACTCAGTTTCCCTCTGAGGGTGTGGGCTACAGAGTaGGACCCTGTCTTTTGGATC +
Preference number: 4 (lower is better)
Translates to: PNSICHTIPPKALSFPLRVWATE*DPVFWI
Trigger: GATCCAAAAGACAGGGTCTCACTCTGTAGCCCACAC...CCTCAGAGGGAAACTGAGTGCTTTAGGCGGGATGGTGTGGCAGATACTGTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505563.5
CDS-3UTR CCA 90 bp CAGGATGGCCTCCACTCCCGGCACTTGGACAAATCACAGGGTTGCTATTATTGGTCCACTCCCGGCACTTaGACAAATCACAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: QDGLHSRHLDKSQGCYYWSTPGT*TNHRVA
Trigger: AGCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGA...CCAATAATAGCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGAGGCCATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR GCA 90 bp GAACAGCAGGAATATCCTTGCAATGAAGGACAGGGTGTCACTGCTAGGGAAGTTCAAATTCTCGCAATTTaGGACCGCGGGGCTCCTAGT +
Preference number: 4 (lower is better)
Translates to: EQQEYPCNEGQGVTAREVQILAI*DRGAPS
Trigger: ACTAGGAGCCCCGCGGTCGCAAATTGCGAGAATTTG...AACTTCCCTAGCAGTGACACCCTGTCCTTCATTGCAAGGATATTCCTGCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR CCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTAGCACTCTTCTGGAGCTaGAACTACATGGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVALFWS*NYMVWG
Trigger: GCCCCAGACCATGTAGTTCCAGCTCCAGAAGAGTGC...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp CAGGATGGCCTCCACTCCCGGCACTTGGACAAATCACAGGGTTGCTATTATTGGATGTCTGCAGACATCTaGATATTCCCAGCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: QDGLHSRHLDKSQGCYYWMSADI*IFPASG
Trigger: ACCACTAGCTGGGAATATCCAGATGTCTGCAGACAT...CCAATAATAGCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGAGGCCATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR CCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGAGCTGTTGTCAGGATaGCCTCCACTCCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNELLSG*PPLPAL
Trigger: AAGTGCCGGGAGTGGAGGCCATCCTGACAACAGCTC...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp CAGGATGGCCTCCACTCCCGGCACTTGGACAAATCACAGGGTTGCTATTATTGGAAAAGGGGACTGTCCTaGACTTATCCCACCACTTTT +
Preference number: 4 (lower is better)
Translates to: QDGLHSRHLDKSQGCYYWKRGLS*TYPTTF
Trigger: AAAAGTGGTGGGATAAGTCCAGGACAGTCCCCTTTT...CCAATAATAGCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGAGGCCATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR TCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTAGCTGCTCTGACACCCTaGGAATCTTTACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVAALTP*ESLLQA
Trigger: TGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGC...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp TTCCCTCTGAGGGGGCAACCATCTTACAGTTTCCTATTTACTACCCAAAACTTCCTCAGTTTCCTTCTCTaGGCAGGCCGAGCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: FPLRGQPSYSFLFTTQNFLSFLL*AGRAFN
Trigger: GTTGAAGGCTCGGCCTGCTCAGAGAAGGAAACTGAG...GAAGTTTTGGGTAGTAAATAGGAAACTGTAAGATGGTTGCCCCCTCAGAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505563.5
CDS-3UTR TCA 90 bp TTCCCTCTGAGGGGGCAACCATCTTACAGTTTCCTATTTACTACCCAAAACTTCGGCTGCAGCAAGCCATaGTTGCACCATCACACTCCA +
Preference number: 4 (lower is better)
Translates to: FPLRGQPSYSFLFTTQNFGCSKP*LHHHTP
Trigger: TGGAGTGTGATGGTGCAATCATGGCTTGCTGCAGCC...GAAGTTTTGGGTAGTAAATAGGAAACTGTAAGATGGTTGCCCCCTCAGAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505563.5
CDS-3UTR GCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGTCTGGGGCAATCAGTaGCTTGTCTGCAGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNVWGNQ*LVCRSG
Trigger: ACCACTCCTGCAGACAAGGCACTGATTGCCCCAGAC...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGAGCTGGAACTACATaGTCTGGGGCAATCAGTGCC +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNGAGTT*SGAISA
Trigger: GGCACTGATTGCCCCAGACCATGTAGTTCCAGCTCC...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGCACTCTTCTGGAGCTaGAACTACATGGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNALFWS*NYMVWG
Trigger: GCCCCAGACCATGTAGTTCCAGCTCCAGAAGAGTGC...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTATCCACTCCCGGCACTTaGACAAATCACAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVSTPGT*TNHRVA
Trigger: AGCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGA...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TGTCTACCTAACAGTATCTGCCACACCATCCCGCCTAAAGCACTCAGTTTCCCTGTTTCTCCAACTCGGTaGACCTCAGTTTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: CLPNSICHTIPPKALSFPVSPTR*TSVSFS
Trigger: AGAGAAGGAAACTGAGGTCCACCGAGTTGGAGAAAC...AGGGAAACTGAGTGCTTTAGGCGGGATGGTGTGGCAGATACTGTTAGGTAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505563.5
CDS-3UTR TCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTACCAGGATCTCTTTCATaGTCTACCTCAGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVPGSLS*STSEVP
Trigger: TGGCACCTCTGAGGTAGATCATGAAAGAGATCCTGG...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000508124.5
CDS-3UTR TCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTAGGAATATCCTTGCAATaGAGGACAGGGTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVGISLQ*RTGCHC
Trigger: GCAGTGACACCCTGTCCTTCATTGCAAGGATATTCC...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTAGAAACAGGCCATaGTCACTCCAGCTCCCACAA +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNGRNRP*SLQLPQ
Trigger: TTGTGGGAGCTGGAGTGATCATGGCCTGTTTCTACC...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp CCGCCTAAAGCACTCAGTTTCCCTCTGAGGGGGCAACCATCTTACAGTTTCCTACTTTCATCTCTTGGATaGAGACCCATTGTGACTCAA +
Preference number: 4 (lower is better)
Translates to: PPKALSFPLRGQPSYSFLLSSLG*RPIVTQ
Trigger: TTGAGTCACAATGGGTCTTCATCCAAGAGATGAAAG...TAGGAAACTGTAAGATGGTTGCCCCCTCAGAGGGAAACTGAGTGCTTTAGGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505563.5
CDS-3UTR GCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATCAAATTCTCGCAATTTaGGACCGCGGGGCTCCTAGT +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNQILAI*DRGAPS
Trigger: ACTAGGAGCCCCGCGGTCGCAAATTGCGAGAATTTG...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396865.7
ENST00000508124.5
CDS-3UTR CCA 90 bp TGTCTACCTAACAGTATCTGCCACACCATCCCGCCTAAAGCACTCAGTTTCCCTTCCGATGGCTCAAACTaGATATTCATAGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CLPNSICHTIPPKALSFPSDGSN*IFIGPG
Trigger: TCCTGGACCTATGAATATCCAGTTTGAGCCATCGGA...AGGGAAACTGAGTGCTTTAGGCGGGATGGTGTGGCAGATACTGTTAGGTAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505563.5
CDS-3UTR CCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTATGGAACTACATGGTCTaGGGCAATCAGTGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVWNYMV*GNQCLV
Trigger: GACAAGGCACTGATTGCCCCAGACCATGTAGTTCCA...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATTCCACTCCCGGCACTTaGACAAATCACAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNSTPGT*TNHRVA
Trigger: AGCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGA...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGAGCTGTTGTCAGGATaGCCTCCACTCCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTELLSG*PPLPAL
Trigger: AAGTGCCGGGAGTGGAGGCCATCCTGACAACAGCTC...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AAACAGGCCATGATCACTCCAGCTCCCACAATAATTAGATTAAGAATCAGCACAGAGCTGTTGTCAGGATaGCCTCCACTCCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: KQAMITPAPTIIRLRISTELLSG*PPLPAL
Trigger: AAGTGCCGGGAGTGGAGGCCATCCTGACAACAGCTC...TGTGCTGATTCTTAATCTAATTATTGTGGGAGCTGGAGTGATCATGGCCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR CCA 90 bp TTAGCCACGCCCAAAATGATGATGAAAACGTGGAAGATTAATTTAGGCCATGTCGAGCTGTTGTCAGGATaGCCTCCACTCCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: LATPKMMMKTWKINLGHVELLSG*PPLPAL
Trigger: AAGTGCCGGGAGTGGAGGCCATCCTGACAACAGCTC...GACATGGCCTAAATTAATCTTCCACGTTTTCATCATCATTTTGGGCGTGGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR TCA 90 bp TTCCCTCTGAGGGGGCAACCATCTTACAGTTTCCTATTTACTACCCAAAACTTCCCAGGATCTCTTTCATaGTCTACCTCAGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: FPLRGQPSYSFLFTTQNFPGSLS*STSEVP
Trigger: TGGCACCTCTGAGGTAGATCATGAAAGAGATCCTGG...GAAGTTTTGGGTAGTAAATAGGAAACTGTAAGATGGTTGCCCCCTCAGAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505563.5
CDS-3UTR TCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGAATATCCTTGCAATaGAGGACAGGGTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNGISLQ*RTGCHC
Trigger: GCAGTGACACCCTGTCCTTCATTGCAAGGATATTCC...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTATCCACATGCTGCTCCTaGATATCTTATGATCCCTCC +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVSTCCS*ISYDPS
Trigger: GGAGGGATCATAAGATATTCAGGAGCAGCATGTGGA...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp TATAAATGTGCCACAACTTATTTATCCAATCCTGTAGTCCCAGCTACTCAGGAGAGCTACTCAGGAGGCTaGAGTGGGAGGACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: YKCATTYLSNPVVPATQESYSGG*SGRTAS
Trigger: TGAAGCAGTCCTCCCACTTCAGCCTCCTGAGTAGCT...CTCCTGAGTAGCTGGGACTACAGGATTGGATAAATAAGTTGTGGCACATTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505563.5
CDS-3UTR GCA 90 bp CCGCCTAAAGCACTCAGTTTCCCTCTGAGGGGGCAACCATCTTACAGTTTCCTATCAGAGGTGCCAAGATaGCTAGAATCACTATTCATA +
Preference number: 4 (lower is better)
Translates to: PPKALSFPLRGQPSYSFLSEVPR*LESLFI
Trigger: TATGAATAGTGATTCTAGGCATCTTGGCACCTCTGA...TAGGAAACTGTAAGATGGTTGCCCCCTCAGAGGGAAACTGAGTGCTTTAGGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505563.5
CDS-3UTR GCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTAATCAGTGCCTTGTCTaGAGGAGTGGTGAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTNQCLV*RSGEPA
Trigger: AGCCGGCTCACCACTCCTGCAGACAAGGCACTGATT...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR GCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGTCTGGGGCAATCAGTaGCTTGTCTGCAGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTVWGNQ*LVCRSG
Trigger: ACCACTCCTGCAGACAAGGCACTGATTGCCCCAGAC...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCGCACTCTTCTGGAGCTaGAACTACATGGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIALFWS*NYMVWG
Trigger: GCCCCAGACCATGTAGTTCCAGCTCCAGAAGAGTGC...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp GTGGAGGGAAATTATATAGATGAGAGATGGGTATATGAATACAAAGGCCAGTCCGCACTCTTCTGGAGCTaGAACTACATGGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VEGNYIDERWVYEYKGQSALFWS*NYMVWG
Trigger: GCCCCAGACCATGTAGTTCCAGCTCCAGAAGAGTGC...GGACTGGCCTTTGTATTCATATACCCATCTCTCATCTATATAATTTCCCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR CCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTACACATAGCACTCTTCTaGAGCTGGAACTACATGGTC +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVHIALF*SWNYMV
Trigger: GACCATGTAGTTCCAGCTCCAGAAGAGTGCTATGTG...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACGAGCTGTTGTCAGGATaGCCTCCACTCCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDELLSG*PPLPAL
Trigger: AAGTGCCGGGAGTGGAGGCCATCCTGACAACAGCTC...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATCTTGAAATTGAGCAGTaGGAGGAGGAGCCCTACAAG +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNLEIEQ*EEEPYK
Trigger: CTTGTAGGGCTCCTCCTCCCACTGCTCAATTTCAAG...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp GAACAGCAGGAATATCCTTGCAATGAAGGACAGGGTGTCACTGCTAGGGAAGTTTCTGGGGCAATCTTTTaGATCTTAGATCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: EQQEYPCNEGQGVTAREVSGAIF*ILDPMA
Trigger: AGCCATCGGATCTAAGATCCAAAAGATTGCCCCAGA...AACTTCCCTAGCAGTGACACCCTGTCCTTCATTGCAAGGATATTCCTGCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR CCA 90 bp TGTCTACCTAACAGTATCTGCCACACCATCCCGCCTAAAGCACTCAGTTTCCCTCCATCTTTCATCTCTTaGATGAAGACCCATTGTGAC +
Preference number: 4 (lower is better)
Translates to: CLPNSICHTIPPKALSFPPSFIS*MKTHCD
Trigger: GTCACAATGGGTCTTCATCCAAGAGATGAAAGATGG...AGGGAAACTGAGTGCTTTAGGCGGGATGGTGTGGCAGATACTGTTAGGTAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505563.5
CDS-3UTR TCA 90 bp TCTGGATATTCCCAGCTAGTGGTATCCAACGAAAACATCATAGTCCGTGATTTCCCAGGATCTCTTTCATaGTCTACCTCAGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SGYSQLVVSNENIIVRDFPGSLS*STSEVP
Trigger: TGGCACCTCTGAGGTAGATCATGAAAGAGATCCTGG...GAAATCACGGACTATGATGTTTTCGTTGGATACCACTAGCTGGGAATATCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR TCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGGTAGAAACAGGCCATaGTCACTCCAGCTCCCACAA +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTGRNRP*SLQLPQ
Trigger: TTGTGGGAGCTGGAGTGATCATGGCCTGTTTCTACC...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCGGTAGAAACAGGCCATaGTCACTCCAGCTCCCACAA +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIGRNRP*SLQLPQ
Trigger: TTGTGGGAGCTGGAGTGATCATGGCCTGTTTCTACC...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCTGCTCTGACACCCTaGGAATCTTTACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTAALTP*ESLLQA
Trigger: TGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGC...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATGTCTGGGGCAATCAGTaGCTTGTCTGCAGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINVWGNQ*LVCRSG
Trigger: ACCACTCCTGCAGACAAGGCACTGATTGCCCCAGAC...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR GCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACGTCTGGGGCAATCAGTaGCTTGTCTGCAGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDVWGNQ*LVCRSG
Trigger: ACCACTCCTGCAGACAAGGCACTGATTGCCCCAGAC...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTACATTCACGATGTTTGTaGGCTCTATACAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVHSRCL*ALYRKA
Trigger: GGCCTTTCTGTATAGAGCCCACAAACATCGTGAATG...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACGCACTCTTCTGGAGCTaGAACTACATGGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDALFWS*NYMVWG
Trigger: GCCCCAGACCATGTAGTTCCAGCTCCAGAAGAGTGC...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATCACATAGCACTCTTCTaGAGCTGGAACTACATGGTC +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNHIALF*SWNYMV
Trigger: GACCATGTAGTTCCAGCTCCAGAAGAGTGCTATGTG...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTAGCCACGCCCAAAATGATGATGAAAACGTGGAAGATTAATTTAGGCCATGTCTCCACTCCCGGCACTTaGACAAATCACAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LATPKMMMKTWKINLGHVSTPGT*TNHRVA
Trigger: AGCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGA...GACATGGCCTAAATTAATCTTCCACGTTTTCATCATCATTTTGGGCGTGGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR CCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTTCCACTCCCGGCACTTaGACAAATCACAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTSTPGT*TNHRVA
Trigger: AGCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGA...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTACACTTTTCAAACTGTTaGGCTCCTGTGTCATTGGCA +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVHFSNC*APVSLA
Trigger: TGCCAATGACACAGGAGCCCAACAGTTTGAAAAGTG...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp GAACAGCAGGAATATCCTTGCAATGAAGGACAGGGTGTCACTGCTAGGGAAGTTCACTCCAGTCAGCTGTaGAAACTGAAATCTTATCTC +
Preference number: 4 (lower is better)
Translates to: EQQEYPCNEGQGVTAREVHSSQL*KLKSYL
Trigger: GAGATAAGATTTCAGTTTCCACAGCTGACTGGAGTG...AACTTCCCTAGCAGTGACACCCTGTCCTTCATTGCAAGGATATTCCTGCTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR CCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTAGATCCCTCCTATGTTTaGGTAGAAACAGGCCATGAT +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVDPSYV*VETGHD
Trigger: ATCATGGCCTGTTTCTACCCAAACATAGGAGGGATC...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACTGTCTGCAGGAGTGGTaGGCCGGCTGTAGTAATGAA +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDCLQEW*AGCSNE
Trigger: TTCATTACTACAGCCGGCTCACCACTCCTGCAGACA...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR TCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTACTATCATTGCTCCAATaGGAGACACCAAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVLSLLQ*ETPRRK
Trigger: TTTTCTCCTTGGTGTCTCTCATTGGAGCAATGATAG...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp GTGGAGGGAAATTATATAGATGAGAGATGGGTATATGAATACAAAGGCCAGTCCGGAATATCCTTGCAATaGAGGACAGGGTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: VEGNYIDERWVYEYKGQSGISLQ*RTGCHC
Trigger: GCAGTGACACCCTGTCCTTCATTGCAAGGATATTCC...GGACTGGCCTTTGTATTCATATACCCATCTCTCATCTATATAATTTCCCTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR TCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCGGAATATCCTTGCAATaGAGGACAGGGTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIGISLQ*RTGCHC
Trigger: GCAGTGACACCCTGTCCTTCATTGCAAGGATATTCC...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATGGTAGAAACAGGCCATaGTCACTCCAGCTCCCACAA +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINGRNRP*SLQLPQ
Trigger: TTGTGGGAGCTGGAGTGATCATGGCCTGTTTCTACC...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp ATCACTCCAGCTCCCACAATAATTAGATTAAGAATCAGCACATGGAAAATGCTACTCAGTTTCCTTCTCTaGGCAGGCCGAGCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: ITPAPTIIRLRISTWKMLLSFLL*AGRAFN
Trigger: GTTGAAGGCTCGGCCTGCTCAGAGAAGGAAACTGAG...TAGCATTTTCCATGTGCTGATTCTTAATCTAATTATTGTGGGAGCTGGAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR GCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTAATCCAGCCTGTTTTATaGCCCAAGGAATGCTTAGTA +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVIQPVL*PKECLV
Trigger: TACTAAGCATTCCTTGGGGCATAAAACAGGCTGGAT...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTAAGCCGAAATAATGTCTaGAGACATCTGGATATTCCC +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVSRNNV*RHLDIP
Trigger: GGGAATATCCAGATGTCTGCAGACATTATTTCGGCT...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTACCAGCATATAAGCAATaGACAAGTCCCTCACATTGT +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVPAYKQ*TSPSHC
Trigger: ACAATGTGAGGGACTTGTGCATTGCTTATATGCTGG...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp TATAAATGTGCCACAACTTATTTATCCAATCCTGTAGTCCCAGCTACTCAGGAGGCAGCAAGCCATGATTaGACCATCACACTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: YKCATTYLSNPVVPATQEAASHD*TITLQC
Trigger: ACACTGGAGTGTGATGGTGCAATCATGGCTTGCTGC...CTCCTGAGTAGCTGGGACTACAGGATTGGATAAATAAGTTGTGGCACATTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505563.5
CDS-3UTR CCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATTCCGATGGCTCAAACTaGATATTCATAGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNSDGSN*IFIGPG
Trigger: TCCTGGACCTATGAATATCCAGTTTGAGCCATCGGA...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000508124.5
CDS-3UTR CCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATCATTCACGATGTTTGTaGGCTCTATACAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNHSRCL*ALYRKA
Trigger: GGCCTTTCTGTATAGAGCCCACAAACATCGTGAATG...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CCA 90 bp GGCACTTGGACAAATCACAGGGTTGCTATTATTGGTACTCAGTATAGTGTCTGTCACATAGCACTCTTCTaGAGCTGGAACTACATGGTC +
Preference number: 4 (lower is better)
Translates to: GTWTNHRVAIIGTQYSVCHIALF*SWNYMV
Trigger: GACCATGTAGTTCCAGCTCCAGAAGAGTGCTATGTG...ACAGACACTATACTGAGTACCAATAATAGCAACCCTGTGATTTGTCCAAGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR CCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATATGTCTGCAGACATCTaGATATTCCCAGCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNMSADI*IFPASG
Trigger: ACCACTAGCTGGGAATATCCAGATGTCTGCAGACAT...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACTCCACTCCCGGCACTTaGACAAATCACAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDSTPGT*TNHRVA
Trigger: AGCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGA...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATAAAAGGGGACTGTCCTaGACTTATCCCACCACTTTT +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNKRGLS*TYPTTF
Trigger: AAAAGTGGTGGGATAAGTCCAGGACAGTCCCCTTTT...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCCTTGAAATTGAGCAGTaGGAGGAGGAGCCCTACAAG +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRILEIEQ*EEEPYK
Trigger: CTTGTAGGGCTCCTCCTCCCACTGCTCAATTTCAAG...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTAGCCACGCCCAAAATGATGATGAAAACGTGGAAGATTAATTTAGGCCATGTCCTTGAAATTGAGCAGTaGGAGGAGGAGCCCTACAAG +
Preference number: 4 (lower is better)
Translates to: LATPKMMMKTWKINLGHVLEIEQ*EEEPYK
Trigger: CTTGTAGGGCTCCTCCTCCCACTGCTCAATTTCAAG...GACATGGCCTAAATTAATCTTCCACGTTTTCATCATCATTTTGGGCGTGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR CCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGATCCCTCCTATGTTTaGGTAGAAACAGGCCATGAT +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNDPSYV*VETGHD
Trigger: ATCATGGCCTGTTTCTACCCAAACATAGGAGGGATC...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCGGAGCTGGAACTACATaGTCTGGGGCAATCTTTTGG +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIGAGTT*SGAIFW
Trigger: CCAAAAGATTGCCCCAGACCATGTAGTTCCAGCTCC...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416547.6
ENST00000508124.5
CDS-3UTR CCA 90 bp AAACAGGCCATGATCACTCCAGCTCCCACAATAATTAGATTAAGAATCAGCACAGGAGCTGGAACTACATaGTCTGGGGCAATCTTTTGG +
Preference number: 4 (lower is better)
Translates to: KQAMITPAPTIIRLRISTGAGTT*SGAIFW
Trigger: CCAAAAGATTGCCCCAGACCATGTAGTTCCAGCTCC...TGTGCTGATTCTTAATCTAATTATTGTGGGAGCTGGAGTGATCATGGCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508124.5
3UTR CAA 72 bp GACTGTCCTGGACTTATCCCACCACTTTTCAAACTGTaGGGCTCCTGTGTCATTGGCATAGAAAATCATAGA +
Preference number: 4 (lower is better)
Translates to: DCPGLIPPLFKL*GSCVIGIENHR
Trigger: TCTATGATTTTCTATGCCAATGACACAGGAGCCCAACAGTTTGAAAAGTGGTGGGATAAGTCCAGGACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR TCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACCCAGGATCTCTTTCATaGTCTACCTCAGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDPGSLS*STSEVP
Trigger: TGGCACCTCTGAGGTAGATCATGAAAGAGATCCTGG...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000508124.5
CDS-3UTR TCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTAAAACATCATAGTCCGTaGTTTCACTACTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVKHHSP*FHYSVA
Trigger: TGCTACAGAGTAGTGAAATCACGGACTATGATGTTT...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACGGAATATCCTTGCAATaGAGGACAGGGTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDGISLQ*RTGCHC
Trigger: GCAGTGACACCCTGTCCTTCATTGCAAGGATATTCC...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATCTCCTGAATATCTTATaGTCCCTCCTATGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNLLNIL*SLLCLG
Trigger: ACCCAAACATAGGAGGGATCATAAGATATTCAGGAG...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTCCACATGCTGCTCCTaGATATCTTATGATCCCTCC +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRISTCCS*ISYDPS
Trigger: GGAGGGATCATAAGATATTCAGGAGCAGCATGTGGA...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp ATCACTCCAGCTCCCACAATAATTAGATTAAGAATCAGCACATGGAAAATGCTAGCTGCTCTGACACCCTaGGAATCTTTACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ITPAPTIIRLRISTWKMLAALTP*ESLLQA
Trigger: TGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGC...TAGCATTTTCCATGTGCTGATTCTTAATCTAATTATTGTGGGAGCTGGAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR TCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATAACAGAAGCAGGATTTaGCAATATGCTGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNNRSRI*QYAALT
Trigger: TGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTT...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAACTCAGTTTCCTTCTCTaGGCAGGCCGAGCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKLSFLL*AGRAFN
Trigger: GTTGAAGGCTCGGCCTGCTCAGAGAAGGAAACTGAG...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396865.7
ENST00000508124.5
CDS-3UTR GCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATATCCAGCCTGTTTTATaGCCCAAGGAATGCTTAGTA +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNIQPVL*PKECLV
Trigger: TACTAAGCATTCCTTGGGGCATAAAACAGGCTGGAT...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGAGGTTTGGGCAAACTaGAGAAATGGTCTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNEVWAN*RNGLVS
Trigger: ACTTACTAGACCATTTCTGCAGTTTGCCCAAACCTC...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp TTAGCCACGCCCAAAATGATGATGAAAACGTGGAAGATTAATTTAGGCCATGTCTGCACAGTCATTTGTTaGTTGGCACATCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LATPKMMMKTWKINLGHVCTVIC*LAHPAG
Trigger: ACCAGCAGGATGTGCCAAGCAACAAATGACTGTGCA...GACATGGCCTAAATTAATCTTCCACGTTTTCATCATCATTTTGGGCGTGGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505708.5
CDS-3UTR GCA 90 bp TGTCTACCTAACAGTATCTGCCACACCATCCCGCCTAAAGCACTCAGTTTCCCTGCATACTATACACACTaGTCTGTACTTCAATTTTTC +
Preference number: 4 (lower is better)
Translates to: CLPNSICHTIPPKALSFPAYYTH*SVLQFF
Trigger: GAAAAATTGAAGTACAGAGCAGTGTGTATAGTATGC...AGGGAAACTGAGTGCTTTAGGCGGGATGGTGTGGCAGATACTGTTAGGTAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505563.5
CDS-3UTR GCA 90 bp TATAAATGTGCCACAACTTATTTATCCAATCCTGTAGTCCCAGCTACTCAGGAGCTACCTAACAGTATCTaGCACACCATCCCGCCTAAA +
Preference number: 4 (lower is better)
Translates to: YKCATTYLSNPVVPATQELPNSI*HTIPPK
Trigger: TTTAGGCGGGATGGTGTGGCAGATACTGTTAGGTAG...CTCCTGAGTAGCTGGGACTACAGGATTGGATAAATAAGTTGTGGCACATTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505563.5
CDS-3UTR CCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACTGGAACTACATGGTCTaGGGCAATCAGTGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDWNYMV*GNQCLV
Trigger: GACAAGGCACTGATTGCCCCAGACCATGTAGTTCCA...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTAGGAGCTGGAACTACATaGTCTGGGGCAATCAGTGCC +
Preference number: 4 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLGAGTT*SGAISA
Trigger: GGCACTGATTGCCCCAGACCATGTAGTTCCAGCTCC...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGGAGCTGGAACTACATaGTCTGGGGCAATCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKGAGTT*SGAISA
Trigger: GGCACTGATTGCCCCAGACCATGTAGTTCCAGCTCC...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTCACATAGCACTCTTCTaGAGCTGGAACTACATGGTC +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTHIALF*SWNYMV
Trigger: GACCATGTAGTTCCAGCTCCAGAAGAGTGCTATGTG...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATATAAGCAGAGCCCAATaGACTATACACATAGCACTC +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNISRAQ*TIHIAL
Trigger: GAGTGCTATGTGTATAGTCCATTGGGCTCTGCTTAT...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTATGTCACCGAAGATATaGCCCAAAAGCTGGACACGA +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTMSPKI*PKSWTR
Trigger: TCGTGTCCAGCTTTTGGGCCATATCTTCGGTGACAT...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AAACAGGCCATGATCACTCCAGCTCCCACAATAATTAGATTAAGAATCAGCACAATGTCACCGAAGATATaGCCCAAAAGCTGGACACGA +
Preference number: 4 (lower is better)
Translates to: KQAMITPAPTIIRLRISTMSPKI*PKSWTR
Trigger: TCGTGTCCAGCTTTTGGGCCATATCTTCGGTGACAT...TGTGCTGATTCTTAATCTAATTATTGTGGGAGCTGGAGTGATCATGGCCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR CCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATCAAACAGTAGAGGTTTaGGCAAACTGCAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNQTVEV*ANCRNG
Trigger: ACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTG...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTAGCCACGCCCAAAATGATGATGAAAACGTGGAAGATTAATTTAGGCCATGTCGTTTCTCCAACTCGGTaGACCTCAGTTTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LATPKMMMKTWKINLGHVVSPTR*TSVSFS
Trigger: AGAGAAGGAAACTGAGGTCCACCGAGTTGGAGAAAC...GACATGGCCTAAATTAATCTTCCACGTTTTCATCATCATTTTGGGCGTGGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR TCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTAGGTAGAAACAGGCCATaGTCACTCCAGCTCCCACAA +
Preference number: 4 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLGRNRP*SLQLPQ
Trigger: TTGTGGGAGCTGGAGTGATCATGGCCTGTTTCTACC...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp CTCTTCTTGGTGGAGGGAAATTATATAGATGAGAGATGGGTATATGAATACAAAGGTAGAAACAGGCCATaGTCACTCCAGCTCCCACAA +
Preference number: 4 (lower is better)
Translates to: LFLVEGNYIDERWVYEYKGRNRP*SLQLPQ
Trigger: TTGTGGGAGCTGGAGTGATCATGGCCTGTTTCTACC...TTTGTATTCATATACCCATCTCTCATCTATATAATTTCCCTCCACCAAGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR TCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATTCCACATGCTGCTCCTaGATATCTTATGATCCCTCC +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINSTCCS*ISYDPS
Trigger: GGAGGGATCATAAGATATTCAGGAGCAGCATGTGGA...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGCTGCTCTGACACCCTaGGAATCTTTACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKAALTP*ESLLQA
Trigger: TGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGC...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGACAATATGCTGCTCTaGCACCCTGAGAATCTTTAC +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTDNMLL*HPENLY
Trigger: GTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTC...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATTCAGAGGTGCCAAGATaGCTAGAATCACTATTCATA +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNSEVPR*LESLFI
Trigger: TATGAATAGTGATTCTAGGCATCTTGGCACCTCTGA...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000508124.5
CDS-3UTR GCA 90 bp TCTGGATATTCCCAGCTAGTGGTATCCAACGAAAACATCATAGTCCGTGATTTCATCCAGCCTGTTTTATaGCCCAAGGAATGCTTAGTA +
Preference number: 4 (lower is better)
Translates to: SGYSQLVVSNENIIVRDFIQPVL*PKECLV
Trigger: TACTAAGCATTCCTTGGGGCATAAAACAGGCTGGAT...GAAATCACGGACTATGATGTTTTCGTTGGATACCACTAGCTGGGAATATCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR GCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTACCAATAAACTATCATTaGTCCAATGAGAGACACCAA +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVPINYH*SNERHQ
Trigger: TTGGTGTCTCTCATTGGAGCAATGATAGTTTATTGG...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTAGACAAATCACAGGGTTaGTATTATTGGTACTCAGTA +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVDKSQG*YYWYSV
Trigger: TACTGAGTACCAATAATAGCAACCCTGTGATTTGTC...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp GGCACTTGGACAAATCACAGGGTTGCTATTATTGGTACTCAGTATAGTGTCTGTCCAGCATATAAGCAATaGACAAGTCCCTCACATTGT +
Preference number: 4 (lower is better)
Translates to: GTWTNHRVAIIGTQYSVCPAYKQ*TSPSHC
Trigger: ACAATGTGAGGGACTTGTGCATTGCTTATATGCTGG...ACAGACACTATACTGAGTACCAATAATAGCAACCCTGTGATTTGTCCAAGTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR GCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCACGAGCCAGGTAGCCTaGTCAATACAATCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRITSQVA*SIQSLD
Trigger: ATCCAAAGATTGTATTGAGCAGGCTACCTGGCTCGT...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505708.5
CDS-3UTR GCA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATATGGAAAATGCTGCTTaGACAGTCATTTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNMENAA*TVICCL
Trigger: CAAGCAACAAATGACTGTGCAAGCAGCATTTTCCAT...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505708.5
CDS-3UTR CCA 90 bp AATCAGCACATGGAAAATGCTAGGATAAATGTCACCGAAGATATGGCCCAAAAGTCCGATGGCTCAAACTaGATATTCATAGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: NQHMENARINVTEDMAQKSDGSN*IFIGPG
Trigger: TCCTGGACCTATGAATATCCAGTTTGAGCCATCGGA...CTTTTGGGCCATATCTTCGGTGACATTTATCCTAGCATTTTCCATGTGCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR CCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCCATTCACGATGTTTGTaGGCTCTATACAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIHSRCL*ALYRKA
Trigger: GGCCTTTCTGTATAGAGCCCACAAACATCGTGAATG...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATCACATAGCACTCTTCTaGAGCTGGAACTACATGGTC +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINHIALF*SWNYMV
Trigger: GACCATGTAGTTCCAGCTCCAGAAGAGTGCTATGTG...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACCACATAGCACTCTTCTaGAGCTGGAACTACATGGTC +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDHIALF*SWNYMV
Trigger: GACCATGTAGTTCCAGCTCCAGAAGAGTGCTATGTG...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTATGTCTGCAGACATCTaGATATTCCCAGCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTMSADI*IFPASG
Trigger: ACCACTAGCTGGGAATATCCAGATGTCTGCAGACAT...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTCACTTTTCAAACTGTTaGGCTCCTGTGTCATTGGCA +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTHFSNC*APVSLA
Trigger: TGCCAATGACACAGGAGCCCAACAGTTTGAAAAGTG...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AAACAGGCCATGATCACTCCAGCTCCCACAATAATTAGATTAAGAATCAGCACAAAAAGGGGACTGTCCTaGACTTATCCCACCACTTTT +
Preference number: 4 (lower is better)
Translates to: KQAMITPAPTIIRLRISTKRGLS*TYPTTF
Trigger: AAAAGTGGTGGGATAAGTCCAGGACAGTCCCCTTTT...TGTGCTGATTCTTAATCTAATTATTGTGGGAGCTGGAGTGATCATGGCCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR CCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCAAAAGGGGACTGTCCTaGACTTATCCCACCACTTTT +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIKRGLS*TYPTTF
Trigger: AAAAGTGGTGGGATAAGTCCAGGACAGTCCCCTTTT...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTAGCTCAATACAATCTTTaGATAATGGTGGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVAQYNL*IMVVKE
Trigger: TTCCTTCACCACCATTATCCAAAGATTGTATTGAGC...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACATGTCACCGAAGATATaGCCCAAAAGCTGGACACGA +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDMSPKI*PKSWTR
Trigger: TCGTGTCCAGCTTTTGGGCCATATCTTCGGTGACAT...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCGATCCCTCCTATGTTTaGGTAGAAACAGGCCATGAT +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIDPSYV*VETGHD
Trigger: ATCATGGCCTGTTTCTACCCAAACATAGGAGGGATC...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATGTTTCTCCAACTCGGTaGACCTCAGTTTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINVSPTR*TSVSFS
Trigger: AGAGAAGGAAACTGAGGTCCACCGAGTTGGAGAAAC...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396865.7
ENST00000508124.5
CDS-3UTR CCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTTCTGGGGCAATCTTTTaGATCTTAGATCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTSGAIF*ILDPMA
Trigger: AGCCATCGGATCTAAGATCCAAAAGATTGCCCCAGA...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416547.6
ENST00000508124.5
CDS-3UTR TCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCCTATCATTGCTCCAATaGGAGACACCAAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRILSLLQ*ETPRRK
Trigger: TTTTCTCCTTGGTGTCTCTCATTGGAGCAATGATAG...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp GTGGAGGGAAATTATATAGATGAGAGATGGGTATATGAATACAAAGGCCAGTCCCTCCTGAATATCTTATaGTCCCTCCTATGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: VEGNYIDERWVYEYKGQSLLNIL*SLLCLG
Trigger: ACCCAAACATAGGAGGGATCATAAGATATTCAGGAG...GGACTGGCCTTTGTATTCATATACCCATCTCTCATCTATATAATTTCCCTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR TCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATAAGCAAAACCCAGCATaGTTTCTTCCTAGGGCATAC +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINKQNPA*FLPRAY
Trigger: GTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTT...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACGACAATATGCTGCTCTaGCACCCTGAGAATCTTTAC +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDDNMLL*HPENLY
Trigger: GTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTC...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTAACAGAAGCAGGATTTaGCAATATGCTGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTNRSRI*QYAALT
Trigger: TGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTT...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCATCCAGCCTGTTTTATaGCCCAAGGAATGCTTAGTA +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIIQPVL*PKECLV
Trigger: TACTAAGCATTCCTTGGGGCATAAAACAGGCTGGAT...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCAGCCGAAATAATGTCTaGAGACATCTGGATATTCCC +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRISRNNV*RHLDIP
Trigger: GGGAATATCCAGATGTCTGCAGACATTATTTCGGCT...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCCCAGCATATAAGCAATaGACAAGTCCCTCACATTGT +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIPAYKQ*TSPSHC
Trigger: ACAATGTGAGGGACTTGTGCATTGCTTATATGCTGG...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp CCAGTAGTAAATCCAGCCTGTTTTATGCCCCAAGGAATGCTTAGTATAGATGTTGATTTGACAATATGCTaGTCTGACACCCTGAGAATC +
Preference number: 4 (lower is better)
Translates to: PVVNPACFMPQGMLSIDVDLTIC*SDTLRI
Trigger: GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATC...AACATCTATACTAAGCATTCCTTGGGGCATAAAACAGGCTGGATTTACTACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR GCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGAGGTTTGGGCAAACTaGAGAAATGGTCTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTEVWAN*RNGLVS
Trigger: ACTTACTAGACCATTTCTGCAGTTTGCCCAAACCTC...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp GTGGAGGGAAATTATATAGATGAGAGATGGGTATATGAATACAAAGGCCAGTCCGAGGTTTGGGCAAACTaGAGAAATGGTCTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: VEGNYIDERWVYEYKGQSEVWAN*RNGLVS
Trigger: ACTTACTAGACCATTTCTGCAGTTTGCCCAAACCTC...GGACTGGCCTTTGTATTCATATACCCATCTCTCATCTATATAATTTCCCTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR GCA 90 bp TTAGCCACGCCCAAAATGATGATGAAAACGTGGAAGATTAATTTAGGCCATGTCGCACATGGAAAATGCTaGTTGCACAGTCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: LATPKMMMKTWKINLGHVAHGKC*LHSHLL
Trigger: CAACAAATGACTGTGCAAGCAGCATTTTCCATGTGC...GACATGGCCTAAATTAATCTTCCACGTTTTCATCATCATTTTGGGCGTGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505708.5
CDS-3UTR CCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATCATTCACGATGTTTGTaGGCTCTATACAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINHSRCL*ALYRKA
Trigger: GGCCTTTCTGTATAGAGCCCACAAACATCGTGAATG...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAATGGAACTACATGGTCTaGGGCAATCAGTGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKWNYMV*GNQCLV
Trigger: GACAAGGCACTGATTGCCCCAGACCATGTAGTTCCA...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCATAAGCAGAGCCCAATaGACTATACACATAGCACTC +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIISRAQ*TIHIAL
Trigger: GAGTGCTATGTGTATAGTCCATTGGGCTCTGCTTAT...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp GTGGAGGGAAATTATATAGATGAGAGATGGGTATATGAATACAAAGGCCAGTCCATAAGCAGAGCCCAATaGACTATACACATAGCACTC +
Preference number: 4 (lower is better)
Translates to: VEGNYIDERWVYEYKGQSISRAQ*TIHIAL
Trigger: GAGTGCTATGTGTATAGTCCATTGGGCTCTGCTTAT...GGACTGGCCTTTGTATTCATATACCCATCTCTCATCTATATAATTTCCCTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR CCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACATGTCTGCAGACATCTaGATATTCCCAGCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDMSADI*IFPASG
Trigger: ACCACTAGCTGGGAATATCCAGATGTCTGCAGACAT...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATCACTTTTCAAACTGTTaGGCTCCTGTGTCATTGGCA +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINHFSNC*APVSLA
Trigger: TGCCAATGACACAGGAGCCCAACAGTTTGAAAAGTG...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATAAAAGGGGACTGTCCTaGACTTATCCCACCACTTTT +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINKRGLS*TYPTTF
Trigger: AAAAGTGGTGGGATAAGTCCAGGACAGTCCCCTTTT...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACAAAAGGGGACTGTCCTaGACTTATCCCACCACTTTT +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDKRGLS*TYPTTF
Trigger: AAAAGTGGTGGGATAAGTCCAGGACAGTCCCCTTTT...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAACTTGAAATTGAGCAGTaGGAGGAGGAGCCCTACAAG +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKLEIEQ*EEEPYK
Trigger: CTTGTAGGGCTCCTCCTCCCACTGCTCAATTTCAAG...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTCAAACAGTAGAGGTTTaGGCAAACTGCAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTQTVEV*ANCRNG
Trigger: ACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTG...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTGGAACTACATGGTCTaGGGCAATCTTTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIWNYMV*GNLLDL
Trigger: AAGATCCAAAAGATTGCCCCAGACCATGTAGTTCCA...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416547.6
ENST00000508124.5
CDS-3UTR TCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCAAACATCATAGTCCGTaGTTTCACTACTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIKHHSP*FHYSVA
Trigger: TGCTACAGAGTAGTGAAATCACGGACTATGATGTTT...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp CCAGTAGTAAATCCAGCCTGTTTTATGCCCCAAGGAATGCTTAGTATAGATGTTAAACATCATAGTCCGTaGTTTCACTACTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: PVVNPACFMPQGMLSIDVKHHSP*FHYSVA
Trigger: TGCTACAGAGTAGTGAAATCACGGACTATGATGTTT...AACATCTATACTAAGCATTCCTTGGGGCATAAAACAGGCTGGATTTACTACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR TCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTAAACATCATAGTCCGTaGTTTCACTACTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTKHHSP*FHYSVA
Trigger: TGCTACAGAGTAGTGAAATCACGGACTATGATGTTT...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATCTCCTGAATATCTTATaGTCCCTCCTATGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINLLNIL*SLLCLG
Trigger: ACCCAAACATAGGAGGGATCATAAGATATTCAGGAG...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp ATCACTCCAGCTCCCACAATAATTAGATTAAGAATCAGCACATGGAAAATGCTAAAGCAAAACCCAGCATaGTTTCTTCCTAGGGCATAC +
Preference number: 4 (lower is better)
Translates to: ITPAPTIIRLRISTWKMLKQNPA*FLPRAY
Trigger: GTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTT...TAGCATTTTCCATGTGCTGATTCTTAATCTAATTATTGTGGGAGCTGGAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR TCA 90 bp TTAGCCACGCCCAAAATGATGATGAAAACGTGGAAGATTAATTTAGGCCATGTCTCCTGGGGATTACATTaGCATTACTTTTGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: LATPKMMMKTWKINLGHVSWGLH*HYFCLY
Trigger: GTAGAGACAAAAGTAATGTCAATGTAATCCCCAGGA...GACATGGCCTAAATTAATCTTCCACGTTTTCATCATCATTTTGGGCGTGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR TCA 90 bp AATCAGCACATGGAAAATGCTAGGATAAATGTCACCGAAGATATGGCCCAAAAGTCCTGGGGATTACATTaGCATTACTTTTGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: NQHMENARINVTEDMAQKSWGLH*HYFCLY
Trigger: GTAGAGACAAAAGTAATGTCAATGTAATCCCCAGGA...CTTTTGGGCCATATCTTCGGTGACATTTATCCTAGCATTTTCCATGTGCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR TCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACTTACAGAGAACTGTTTaGACTCCTGCCAACTTACTG +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDLQRTV*TPANLL
Trigger: CAGTAAGTTGGCAGGAGTTCAAACAGTTCTCTGTAA...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515629.5
CDS-3UTR GCA 90 bp TCTGGATATTCCCAGCTAGTGGTATCCAACGAAAACATCATAGTCCGTGATTTCGACAAATCACAGGGTTaGTATTATTGGTACTCAGTA +
Preference number: 4 (lower is better)
Translates to: SGYSQLVVSNENIIVRDFDKSQG*YYWYSV
Trigger: TACTGAGTACCAATAATAGCAACCCTGTGATTTGTC...GAAATCACGGACTATGATGTTTTCGTTGGATACCACTAGCTGGGAATATCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR GCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATCCAGCATATAAGCAATaGACAAGTCCCTCACATTGT +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINPAYKQ*TSPSHC
Trigger: ACAATGTGAGGGACTTGTGCATTGCTTATATGCTGG...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACGATTTGACAATATGCTaGTCTGACACCCTGAGAATC +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDDLTIC*SDTLRI
Trigger: GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATC...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATGATTTGACAATATGCTaGTCTGACACCCTGAGAATC +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINDLTIC*SDTLRI
Trigger: GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATC...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATGAGGTTTGGGCAAACTaGAGAAATGGTCTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINEVWAN*RNGLVS
Trigger: ACTTACTAGACCATTTCTGCAGTTTGCCCAAACCTC...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATTACAGAAAGGCCTTTTaGATCTTAGATCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINYRKAF*ILDPMA
Trigger: AGCCATCGGATCTAAGATCCAAAAGGCCTTTCTGTA...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318672.7
ENST00000396865.7
CDS-3UTR CCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATATAAGCAGAGCCCAATaGACTATACACATAGCACTC +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINISRAQ*TIHIAL
Trigger: GAGTGCTATGTGTATAGTCCATTGGGCTCTGCTTAT...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACCACTCCAGTCAGCTGTaGAAACTGAAATCTTATCTC +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDHSSQL*KLKSYL
Trigger: GAGATAAGATTTCAGTTTCCACAGCTGACTGGAGTG...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATCACTCCAGTCAGCTGTaGAAACTGAAATCTTATCTC +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINHSSQL*KLKSYL
Trigger: GAGATAAGATTTCAGTTTCCACAGCTGACTGGAGTG...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTAATGTCACCGAAGATATaGCCCAAAAGCTGGACACGA +
Preference number: 4 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLMSPKI*PKSWTR
Trigger: TCGTGTCCAGCTTTTGGGCCATATCTTCGGTGACAT...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACCAAACAGTAGAGGTTTaGGCAAACTGCAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDQTVEV*ANCRNG
Trigger: ACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTG...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTAGCCACGCCCAAAATGATGATGAAAACGTGGAAGATTAATTTAGGCCATGTCTTAAGAATCAGCACATaGAAAATGCTGCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: LATPKMMMKTWKINLGHVLRIST*KMLLAQ
Trigger: CTGTGCAAGCAGCATTTTCCATGTGCTGATTCTTAA...GACATGGCCTAAATTAATCTTCCACGTTTTCATCATCATTTTGGGCGTGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505708.5
CDS-3UTR TCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACAAACATCATAGTCCGTaGTTTCACTACTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDKHHSP*FHYSVA
Trigger: TGCTACAGAGTAGTGAAATCACGGACTATGATGTTT...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAAAGCAAAACCCAGCATaGTTTCTTCCTAGGGCATAC +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKKQNPA*FLPRAY
Trigger: GTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTT...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACAATATGCTGCTCTaGCACCCTGAGAATCTTTAC +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKDNMLL*HPENLY
Trigger: GTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTC...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATTCCTGGGGATTACATTaGCATTACTTTTGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINSWGLH*HYFCLY
Trigger: GTAGAGACAAAAGTAATGTCAATGTAATCCCCAGGA...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATTTTTCAAGAAAACCCTaGGCATTCAAGTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINFSRKP*AFKSAF
Trigger: GAATGCTGACTTGAATGCTCAGGGTTTTCTTGAAAA...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515629.5
CDS-3UTR GCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCCCAATAAACTATCATTaGTCCAATGAGAGACACCAA +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIPINYH*SNERHQ
Trigger: TTGGTGTCTCTCATTGGAGCAATGATAGTTTATTGG...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCGACAAATCACAGGGTTaGTATTATTGGTACTCAGTA +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIDKSQG*YYWYSV
Trigger: TACTGAGTACCAATAATAGCAACCCTGTGATTTGTC...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGACAAATCACAGGGTTaGTATTATTGGTACTCAGTA +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTDKSQG*YYWYSV
Trigger: TACTGAGTACCAATAATAGCAACCCTGTGATTTGTC...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCAACTGTTTGAACTCCTaGCAACTTACTGTAATGGAA +
Preference number: 4 (lower is better)
Translates to: NIKQKQDLTICCSDTLRINCLNS*QLTVME
Trigger: TTCCATTACAGTAAGTTGGCAGGAGTTCAAACAGTT...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515629.5
CDS-3UTR CCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAATCCGATGGCTCAAACTaGATATTCATAGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKSDGSN*IFIGPG
Trigger: TCCTGGACCTATGAATATCCAGTTTGAGCCATCGGA...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000508124.5
CDS-3UTR CCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAATGTCTGCAGACATCTaGATATTCCCAGCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKMSADI*IFPASG
Trigger: ACCACTAGCTGGGAATATCCAGATGTCTGCAGACAT...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTACACTTTTCAAACTGTTaGGCTCCTGTGTCATTGGCA +
Preference number: 4 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLHFSNC*APVSLA
Trigger: TGCCAATGACACAGGAGCCCAACAGTTTGAAAAGTG...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCTCAATACAATCTTTaGATAATGGTGGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTAQYNL*IMVVKE
Trigger: TTCCTTCACCACCATTATCCAAAGATTGTATTGAGC...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp CCAGTAGTAAATCCAGCCTGTTTTATGCCCCAAGGAATGCTTAGTATAGATGTTGCTCAATACAATCTTTaGATAATGGTGGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: PVVNPACFMPQGMLSIDVAQYNL*IMVVKE
Trigger: TTCCTTCACCACCATTATCCAAAGATTGTATTGAGC...AACATCTATACTAAGCATTCCTTGGGGCATAAAACAGGCTGGATTTACTACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR CCA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTTATACAGTCATCATCTaGAACAGCAGGAATATCCTT +
Preference number: 4 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTYTVII*NSRNIL
Trigger: AAGGATATTCCTGCTGTTCCAGATGATGACTGTATA...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGATCCCTCCTATGTTTaGGTAGAAACAGGCCATGAT +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKDPSYV*VETGHD
Trigger: ATCATGGCCTGTTTCTACCCAAACATAGGAGGGATC...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTAGATCCCTCCTATGTTTaGGTAGAAACAGGCCATGAT +
Preference number: 4 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLDPSYV*VETGHD
Trigger: ATCATGGCCTGTTTCTACCCAAACATAGGAGGGATC...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAACTATCATTGCTCCAATaGGAGACACCAAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKLSLLQ*ETPRRK
Trigger: TTTTCTCCTTGGTGTCTCTCATTGGAGCAATGATAG...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp CTCTTCTTGGTGGAGGGAAATTATATAGATGAGAGATGGGTATATGAATACAAACTATCATTGCTCCAATaGGAGACACCAAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: LFLVEGNYIDERWVYEYKLSLLQ*ETPRRK
Trigger: TTTTCTCCTTGGTGTCTCTCATTGGAGCAATGATAG...TTTGTATTCATATACCCATCTCTCATCTATATAATTTCCCTCCACCAAGAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR TCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTAAACAGAAGCAGGATTTaGCAATATGCTGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLNRSRI*QYAALT
Trigger: TGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTT...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp CTCTTCTTGGTGGAGGGAAATTATATAGATGAGAGATGGGTATATGAATACAAAAACAGAAGCAGGATTTaGCAATATGCTGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: LFLVEGNYIDERWVYEYKNRSRI*QYAALT
Trigger: TGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTT...TTTGTATTCATATACCCATCTCTCATCTATATAATTTCCCTCCACCAAGAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR GCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAAGCCGAAATAATGTCTaGAGACATCTGGATATTCCC +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKSRNNV*RHLDIP
Trigger: GGGAATATCCAGATGTCTGCAGACATTATTTCGGCT...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTACCAGCATATAAGCAATaGACAAGTCCCTCACATTGT +
Preference number: 4 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLPAYKQ*TSPSHC
Trigger: ACAATGTGAGGGACTTGTGCATTGCTTATATGCTGG...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTAGATTTGACAATATGCTaGTCTGACACCCTGAGAATC +
Preference number: 4 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLDLTIC*SDTLRI
Trigger: GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATC...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTACACTCCAGTCAGCTGTaGAAACTGAAATCTTATCTC +
Preference number: 4 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLHSSQL*KLKSYL
Trigger: GAGATAAGATTTCAGTTTCCACAGCTGACTGGAGTG...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACGCTCAATACAATCTTTaGATAATGGTGGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDAQYNL*IMVVKE
Trigger: TTCCTTCACCACCATTATCCAAAGATTGTATTGAGC...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATGCTCAATACAATCTTTaGATAATGGTGGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINAQYNL*IMVVKE
Trigger: TTCCTTCACCACCATTATCCAAAGATTGTATTGAGC...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATTATACAGTCATCATCTaGAACAGCAGGAATATCCTT +
Preference number: 4 (lower is better)
Translates to: LTICCSDTLRIFTAGKINYTVII*NSRNIL
Trigger: AAGGATATTCCTGCTGTTCCAGATGATGACTGTATA...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAACAAACAGTAGAGGTTTaGGCAAACTGCAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKQTVEV*ANCRNG
Trigger: ACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTG...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTACAAACAGTAGAGGTTTaGGCAAACTGCAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLQTVEV*ANCRNG
Trigger: ACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTG...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATGGAACTACATGGTCTaGGGCAATCTTTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLWNYMV*GNLLDL
Trigger: AAGATCCAAAAGATTGCCCCAGACCATGTAGTTCCA...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416547.6
ENST00000508124.5
CDS-3UTR TCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTAAAACATCATAGTCCGTaGTTTCACTACTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLKHHSP*FHYSVA
Trigger: TGCTACAGAGTAGTGAAATCACGGACTATGATGTTT...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR TCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAATCCTGGGGATTACATTaGCATTACTTTTGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKSWGLH*HYFCLY
Trigger: GTAGAGACAAAAGTAATGTCAATGTAATCCCCAGGA...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAATCAGAGGTGCCAAGATaGCTAGAATCACTATTCATA +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKSEVPR*LESLFI
Trigger: TATGAATAGTGATTCTAGGCATCTTGGCACCTCTGA...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000508124.5
CDS-3UTR GCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATCAGAGGTGCCAAGATaGCTAGAATCACTATTCATA +
Preference number: 4 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLSEVPR*LESLFI
Trigger: TATGAATAGTGATTCTAGGCATCTTGGCACCTCTGA...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000508124.5
CDS-3UTR GCA 90 bp ATCACTCCAGCTCCCACAATAATTAGATTAAGAATCAGCACATGGAAAATGCTACCAATAAACTATCATTaGTCCAATGAGAGACACCAA +
Preference number: 4 (lower is better)
Translates to: ITPAPTIIRLRISTWKMLPINYH*SNERHQ
Trigger: TTGGTGTCTCTCATTGGAGCAATGATAGTTTATTGG...TAGCATTTTCCATGTGCTGATTCTTAATCTAATTATTGTGGGAGCTGGAGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR GCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTACCAATAAACTATCATTaGTCCAATGAGAGACACCAA +
Preference number: 4 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLPINYH*SNERHQ
Trigger: TTGGTGTCTCTCATTGGAGCAATGATAGTTTATTGG...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAACCAATAAACTATCATTaGTCCAATGAGAGACACCAA +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKPINYH*SNERHQ
Trigger: TTGGTGTCTCTCATTGGAGCAATGATAGTTTATTGG...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR GCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACAAATCACAGGGTTaGTATTATTGGTACTCAGTA +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKDKSQG*YYWYSV
Trigger: TACTGAGTACCAATAATAGCAACCCTGTGATTTGTC...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTAGCTCAATACAATCTTTaGATAATGGTGGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLAQYNL*IMVVKE
Trigger: TTCCTTCACCACCATTATCCAAAGATTGTATTGAGC...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAATATACAGTCATCATCTaGAACAGCAGGAATATCCTT +
Preference number: 4 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKYTVII*NSRNIL
Trigger: AAGGATATTCCTGCTGTTCCAGATGATGACTGTATA...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CCA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATATACAGTCATCATCTaGAACAGCAGGAATATCCTT +
Preference number: 4 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLYTVII*NSRNIL
Trigger: AAGGATATTCCTGCTGTTCCAGATGATGACTGTATA...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000508124.5
ENST00000515629.5
CDS GCA 90 bp AGGCTGGGCAGCCGGCGCGCCCAGGTGGGCGAGTCCAGTCGGAACTaGAGCCCCGAGTTTGCTCCAGTTCCTTGTCCCGGCTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: RLGSRRAQVGESSRN*SPEFAPVPCPGWRL
Trigger: CAGCCTCCAGCCGGGACAAGGAACTGGAGCAAACTCGGGGCTGCAGTTCCGACTGGACTCGCCCACCTGGGCGCGCCGGCTGCCCAGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS TCA 90 bp AGCGGCAATAGCCTGGGTCGCAGGGGCCGGCGGGAGTTGGAGTTCTaGATGCGCCAAGCCCGCGGTCGCTGTCAAACCTCTCGCCGCTAC +
Preference number: 5 (lower is better)
Translates to: SGNSLGRRGRRELEF*MRQARGRCQTSRRY
Trigger: GTAGCGGCGAGAGGTTTGACAGCGACCGCGGGCTTGGCGCATTCAGAACTCCAACTCCCGCCGGCCCCTGCGACCCAGGCTATTGCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS GCA 90 bp GCAATAGCCTGGGTCGCAGGGGCCGGCGGGAGTTGGAGTTCTGAATaGGCCAAGCCCGCGGTCGCTGTCAAACCTCTCGCCGCTACGGAC +
Preference number: 5 (lower is better)
Translates to: AIAWVAGAGGSWSSE*AKPAVAVKPLAATD
Trigger: GTCCGTAGCGGCGAGAGGTTTGACAGCGACCGCGGGCTTGGCGCATTCAGAACTCCAACTCCCGCCGGCCCCTGCGACCCAGGCTATTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS TCA 90 bp ATCGAGGGATCACCCCTCTTTTGGGCTTTCCTGGCGCGTGTTGTATaGTCTGGTTACGTCCTTGGACCAGTTCTGGAGAGTCAGAAGTCT +
Preference number: 5 (lower is better)
Translates to: IEGSPLFWAFLARVV*SGYVLGPVLESQKS
Trigger: AGACTTCTGACTCTCCAGAACTGGTCCAAGGACGTAACCAGATCATACAACACGCGCCAGGAAAGCCCAAAAGAGGGGTGATCCCTCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS TCA 90 bp GAACTACATGGTCTGGGGCAATCAGTGCCTTGTCTGCAGGAGTGGTaGGCCGGCTGTAGTAATGAATTCTCTTGTTCATGGCAGAGGCAT +
Preference number: 5 (lower is better)
Translates to: ELHGLGQSVPCLQEW*AGCSNEFSCSWQRH
Trigger: ATGCCTCTGCCATGAACAAGAGAATTCATTACTACAGCCGGCTCACCACTCCTGCAGACAAGGCACTGATTGCCCCAGACCATGTAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000502247.1
ENST00000503817.5
ENST00000503891.5
ENST00000505708.5
ENST00000511233.5
ENST00000512208.5
ENST00000512595.5
ENST00000513993.5
ENST00000514806.5
ENST00000515629.5
CDS-3UTR CAA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTACTCCACTCCCGGCACTaGGACAAATCACAGGGTTGC +
Preference number: 5 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVLHSRH*DKSQGC
Trigger: GCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGAG...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp GGTGTCTACCTAACAGTATCTGCCACACCATCCCGCCTAAAGCACTCAGTTTCCGTGAGACCCTGTCTTTaGGATCTTAGATCCGATGGC +
Preference number: 5 (lower is better)
Translates to: GVYLTVSATPSRLKHSVSVRPCL*DLRSDG
Trigger: GCCATCGGATCTAAGATCCAAAAGACAGGGTCTCAC...GGAAACTGAGTGCTTTAGGCGGGATGGTGTGGCAGATACTGTTAGGTAGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505563.5
CDS-3UTR CAA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCCTCCACTCCCGGCACTaGGACAAATCACAGGGTTGC +
Preference number: 5 (lower is better)
Translates to: NIKQKQDLTICCSDTLRILHSRH*DKSQGC
Trigger: GCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGAG...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATCTCCACTCCCGGCACTaGGACAAATCACAGGGTTGC +
Preference number: 5 (lower is better)
Translates to: LTICCSDTLRIFTAGKINLHSRH*DKSQGC
Trigger: GCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGAG...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTAAAAATCATAGAGCTGTaGTCAGGATGGCCTCCACTC +
Preference number: 5 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVKIIEL*SGWPPL
Trigger: GAGTGGAGGCCATCCTGACAACAGCTCTATGATTTT...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATCCACTTTTCAAACTGTaGGGCTCCTGTGTCATTGGC +
Preference number: 5 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNPLFKL*GSCVIG
Trigger: GCCAATGACACAGGAGCCCAACAGTTTGAAAAGTGG...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTAGGGGCAATCAGTGCCTaGTCTGCAGGAGTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLGAISA*SAGVVS
Trigger: GCTCACCACTCCTGCAGACAAGGCACTGATTGCCCC...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CAA 90 bp ATCACTCCAGCTCCCACAATAATTAGATTAAGAATCAGCACATGGAAAATGCTACTCCACTCCCGGCACTaGGACAAATCACAGGGTTGC +
Preference number: 5 (lower is better)
Translates to: ITPAPTIIRLRISTWKMLLHSRH*DKSQGC
Trigger: GCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGAG...TAGCATTTTCCATGTGCTGATTCTTAATCTAATTATTGTGGGAGCTGGAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR CAA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATAAAATCATAGAGCTGTaGTCAGGATGGCCTCCACTC +
Preference number: 5 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNKIIEL*SGWPPL
Trigger: GAGTGGAGGCCATCCTGACAACAGCTCTATGATTTT...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATCCAAACAGTAGAGGTTaGGGCAAACTGCAGAAATGG +
Preference number: 5 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNPNSRG*GKLQKW
Trigger: CCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGG...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTATCACATTCACGATGTTaGTGGGCTCTATACAGAAAG +
Preference number: 5 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVSHSRC*WALYRK
Trigger: CTTTCTGTATAGAGCCCACAAACATCGTGAATGTGA...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CAA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTACTCCACTCCCGGCACTaGGACAAATCACAGGGTTGC +
Preference number: 5 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLLHSRH*DKSQGC
Trigger: GCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGAG...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAACTCCACTCCCGGCACTaGGACAAATCACAGGGTTGC +
Preference number: 5 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKLHSRH*DKSQGC
Trigger: GCAACCCTGTGATTTGTCCAAGTGCCGGGAGTGGAG...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCCCACTTTTCAAACTGTaGGGCTCCTGTGTCATTGGC +
Preference number: 5 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIPLFKL*GSCVIG
Trigger: GCCAATGACACAGGAGCCCAACAGTTTGAAAAGTGG...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTCCACTTTTCAAACTGTaGGGCTCCTGTGTCATTGGC +
Preference number: 5 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTPLFKL*GSCVIG
Trigger: GCCAATGACACAGGAGCCCAACAGTTTGAAAAGTGG...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp GTGGAGGGAAATTATATAGATGAGAGATGGGTATATGAATACAAAGGCCAGTCCCCACTTTTCAAACTGTaGGGCTCCTGTGTCATTGGC +
Preference number: 5 (lower is better)
Translates to: VEGNYIDERWVYEYKGQSPLFKL*GSCVIG
Trigger: GCCAATGACACAGGAGCCCAACAGTTTGAAAAGTGG...GGACTGGCCTTTGTATTCATATACCCATCTCTCATCTATATAATTTCCCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR CAA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTATGTCAGACGCTCTTCTaGGTGGAGGGAAATTATATA +
Preference number: 5 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVCQTLF*VEGNYI
Trigger: TATATAATTTCCCTCCACCAAGAAGAGCGTCTGACA...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp TTAGCCACGCCCAAAATGATGATGAAAACGTGGAAGATTAATTTAGGCCATGTCTGCTTGCACAGTCATTaGTTGCTTGGCACATCCTGC +
Preference number: 5 (lower is better)
Translates to: LATPKMMMKTWKINLGHVCLHSH*LLGTSC
Trigger: GCAGGATGTGCCAAGCAACAAATGACTGTGCAAGCA...GACATGGCCTAAATTAATCTTCCACGTTTTCATCATCATTTTGGGCGTGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505708.5
CDS-3UTR CAA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTACATGGAAAATGCTGCTaGCACAGTCATTTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVHGKCC*HSHLLL
Trigger: AAGCAACAAATGACTGTGCAAGCAGCATTTTCCATG...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505708.5
CDS TCA 90 bp TCCGATGGCTCAAACTGGATATTCATAGGTCCAGGATCTCTTTCATaGTCTACCTCAGAGGTGCCAAGATGCCTAGAATCACTATTCATA +
Preference number: 5 (lower is better)
Translates to: SDGSNWIFIGPGSLS*STSEVPRCLESLFI
Trigger: TATGAATAGTGATTCTAGGCATCTTGGCACCTCTGAGGTAGATCATGAAAGAGATCCTGGACCTATGAATATCCAGTTTGAGCCATCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000503891.5
ENST00000504880.5
ENST00000505563.5
ENST00000506624.5
ENST00000507109.5
ENST00000508124.5
ENST00000511233.5
ENST00000513993.5
ENST00000514806.5
CDS-3UTR CAA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCCCAAACAGTAGAGGTTaGGGCAAACTGCAGAAATGG +
Preference number: 5 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIPNSRG*GKLQKW
Trigger: CCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGG...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTCCAAACAGTAGAGGTTaGGGCAAACTGCAGAAATGG +
Preference number: 5 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTPNSRG*GKLQKW
Trigger: CCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGG...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp CCAGTAGTAAATCCAGCCTGTTTTATGCCCCAAGGAATGCTTAGTATAGATGTTCCAAACAGTAGAGGTTaGGGCAAACTGCAGAAATGG +
Preference number: 5 (lower is better)
Translates to: PVVNPACFMPQGMLSIDVPNSRG*GKLQKW
Trigger: CCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGG...AACATCTATACTAAGCATTCCTTGGGGCATAAAACAGGCTGGATTTACTACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR CAA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTATTTACAGAGAACTGTTaGAACTCCTGCCAACTTACT +
Preference number: 5 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVFTENC*NSCQLT
Trigger: AGTAAGTTGGCAGGAGTTCAAACAGTTCTCTGTAAA...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CAA 90 bp GTGGAGGGAAATTATATAGATGAGAGATGGGTATATGAATACAAAGGCCAGTCCACAGTCATTTGTTGCTaGGCACATCCTGCTGGTCAA +
Preference number: 5 (lower is better)
Translates to: VEGNYIDERWVYEYKGQSTVICC*AHPAGQ
Trigger: TTGACCAGCAGGATGTGCCAAGCAACAAATGACTGT...GGACTGGCCTTTGTATTCATATACCCATCTCTCATCTATATAATTTCCCTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505708.5
CDS-3UTR CAA 90 bp GAGGTATTTGGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATACAGGGTTGCTATTATaGGTACTCAGTATAGTGTCT +
Preference number: 5 (lower is better)
Translates to: EVFGLLSQTVEVWANCRNTGLLL*VLSIVS
Trigger: AGACACTATACTGAGTACCAATAATAGCAACCCTGT...ATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCCAAATACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACAAAATCATAGAGCTGTaGTCAGGATGGCCTCCACTC +
Preference number: 5 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDKIIEL*SGWPPL
Trigger: GAGTGGAGGCCATCCTGACAACAGCTCTATGATTTT...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp TCTGGATATTCCCAGCTAGTGGTATCCAACGAAAACATCATAGTCCGTGATTTCAAACAGAAGCAGGATTaGACAATATGCTGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: SGYSQLVVSNENIIVRDFKQKQD*TICCSD
Trigger: GTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT...GAAATCACGGACTATGATGTTTTCGTTGGATACCACTAGCTGGGAATATCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR CAA 90 bp GGCTTACTGTCCCAAACAGTAGAGGTTTGGGCAAACTGCAGAAATGGTCTAGTAATCCTGGGGATTACATaGACATTACTTTTGTCTCTA +
Preference number: 5 (lower is better)
Translates to: GLLSQTVEVWANCRNGLVILGIT*TLLLSL
Trigger: TAGAGACAAAAGTAATGTCAATGTAATCCCCAGGAT...TACTAGACCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGGGACAGTAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp ATCACTCCAGCTCCCACAATAATTAGATTAAGAATCAGCACATGGAAAATGCTAGTCTGGGGCAATCTTTaGGATCTTAGATCCGATGGC +
Preference number: 5 (lower is better)
Translates to: ITPAPTIIRLRISTWKMLVWGNL*DLRSDG
Trigger: GCCATCGGATCTAAGATCCAAAAGATTGCCCCAGAC...TAGCATTTTCCATGTGCTGATTCTTAATCTAATTATTGTGGGAGCTGGAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR CAA 90 bp AAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTTCACATTCACGATGTTaGTGGGCTCTATACAGAAAG +
Preference number: 5 (lower is better)
Translates to: KQKQDLTICCSDTLRIFTSHSRC*WALYRK
Trigger: CTTTCTGTATAGAGCCCACAAACATCGTGAATGTGA...AGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CAA 90 bp GTGGAGGGAAATTATATAGATGAGAGATGGGTATATGAATACAAAGGCCAGTCCGGACAAATCACAGGGTaGCTATTATTGGTACTCAGT +
Preference number: 5 (lower is better)
Translates to: VEGNYIDERWVYEYKGQSGQITG*LLLVLS
Trigger: ACTGAGTACCAATAATAGCAACCCTGTGATTTGTCC...GGACTGGCCTTTGTATTCATATACCCATCTCTCATCTATATAATTTCCCTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR CAA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCGGACAAATCACAGGGTaGCTATTATTGGTACTCAGT +
Preference number: 5 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIGQITG*LLLVLS
Trigger: ACTGAGTACCAATAATAGCAACCCTGTGATTTGTCC...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTACCACTTTTCAAACTGTaGGGCTCCTGTGTCATTGGC +
Preference number: 5 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLPLFKL*GSCVIG
Trigger: GCCAATGACACAGGAGCCCAACAGTTTGAAAAGTGG...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp CTCTTCTTGGTGGAGGGAAATTATATAGATGAGAGATGGGTATATGAATACAAACCACTTTTCAAACTGTaGGGCTCCTGTGTCATTGGC +
Preference number: 5 (lower is better)
Translates to: LFLVEGNYIDERWVYEYKPLFKL*GSCVIG
Trigger: GCCAATGACACAGGAGCCCAACAGTTTGAAAAGTGG...TTTGTATTCATATACCCATCTCTCATCTATATAATTTCCCTCCACCAAGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR CAA 90 bp AACATAAAACAGAAGCAGGATTTGACAATATGCTGCTCTGACACCCTGAGAATCAAACAGAAGCAGGATTaGACAATATGCTGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: NIKQKQDLTICCSDTLRIKQKQD*TICCSD
Trigger: GTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT...GATTCTCAGGGTGTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp AGGAATATCCTTGCAATGAAGGACAGGGTGTCACTGCTAGGGAAGTTGTCTAAAATCCTGGGGATTACATaGACATTACTTTTGTCTCTA +
Preference number: 5 (lower is better)
Translates to: RNILAMKDRVSLLGKLSKILGIT*TLLLSL
Trigger: TAGAGACAAAAGTAATGTCAATGTAATCCCCAGGAT...TTTAGACAACTTCCCTAGCAGTGACACCCTGTCCTTCATTGCAAGGATATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR CAA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTAGTCTGGGGCAATCTTTaGGATCTTAGATCCGATGGC +
Preference number: 5 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLVWGNL*DLRSDG
Trigger: GCCATCGGATCTAAGATCCAAAAGATTGCCCCAGAC...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416547.6
ENST00000508124.5
CDS TCA 90 bp ACAAATACCACAAATATTCCTATTCCCAAGGGAGTAGGCTTTGTATaGGTTTGTTCATATCAGGGAAATTGCCAGCAAACATTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: TNTTNIPIPKGVGFV*VCSYQGNCQQTFGC
Trigger: GCAGCCAAATGTTTGCTGGCAATTTCCCTGATATGAACAAACTCATACAAAGCCTACTCCCTTGGGAATAGGAATATTTGTGGTATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515159.5
CDS-3UTR CAA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATGGACAAATCACAGGGTaGCTATTATTGGTACTCAGT +
Preference number: 5 (lower is better)
Translates to: LTICCSDTLRIFTAGKINGQITG*LLLVLS
Trigger: ACTGAGTACCAATAATAGCAACCCTGTGATTTGTCC...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAAAAATCATAGAGCTGTaGTCAGGATGGCCTCCACTC +
Preference number: 5 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKKIIEL*SGWPPL
Trigger: GAGTGGAGGCCATCCTGACAACAGCTCTATGATTTT...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
40% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp CTCTTCTTGGTGGAGGGAAATTATATAGATGAGAGATGGGTATATGAATACAAAAAAATCATAGAGCTGTaGTCAGGATGGCCTCCACTC +
Preference number: 5 (lower is better)
Translates to: LFLVEGNYIDERWVYEYKKIIEL*SGWPPL
Trigger: GAGTGGAGGCCATCCTGACAACAGCTCTATGATTTT...TTTGTATTCATATACCCATCTCTCATCTATATAATTTCCCTCCACCAAGAAGAG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000508124.5
CDS-3UTR CAA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACTGTCAGACGCTCTTCTaGGTGGAGGGAAATTATATA +
Preference number: 5 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDCQTLF*VEGNYI
Trigger: TATATAATTTCCCTCCACCAAGAAGAGCGTCTGACA...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATAAACAGAAGCAGGATTaGACAATATGCTGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: LTICCSDTLRIFTAGKINKQKQD*TICCSD
Trigger: GTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTACCAAACAGTAGAGGTTaGGGCAAACTGCAGAAATGG +
Preference number: 5 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLPNSRG*GKLQKW
Trigger: CCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGG...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAACCAAACAGTAGAGGTTaGGGCAAACTGCAGAAATGG +
Preference number: 5 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKPNSRG*GKLQKW
Trigger: CCATTTCTGCAGTTTGCCCAAACCTCTACTGTTTGG...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS GCA 90 bp CTCTTCAGGGAAGAGGACACCAATGATCTATCTTTAGTCACCACTTaGATTAGGCATTTTTATAGCAAAAGGATCAGTCACACTTTAAAC +
Preference number: 5 (lower is better)
Translates to: LFREEDTNDLSLVTT*IRHFYSKRISHTLN
Trigger: GTTTAAAGTGTGACTGATCCTTTTGCTATAAAAATGCCTAATGCAAGTGGTGACTAAAGATAGATCATTGGTGTCCTCTTCCCTGAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515754.1
CDS-3UTR CAA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTAATACAGAAAGGCCTTTaGGATCTTAGATCCGATGGC +
Preference number: 5 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLIQKGL*DLRSDG
Trigger: GCCATCGGATCTAAGATCCAAAAGGCCTTTCTGTAT...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318672.7
ENST00000396865.7
CDS-3UTR CAA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACACAGGGTTGCTATTATaGGTACTCAGTATAGTGTCT +
Preference number: 5 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDTGLLL*VLSIVS
Trigger: AGACACTATACTGAGTACCAATAATAGCAACCCTGT...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAATCACATTCACGATGTTaGTGGGCTCTATACAGAAAG +
Preference number: 5 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKSHSRC*WALYRK
Trigger: CTTTCTGTATAGAGCCCACAAACATCGTGAATGTGA...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000505708.5
ENST00000515629.5
CDS-3UTR CAA 90 bp ATCACTCCAGCTCCCACAATAATTAGATTAAGAATCAGCACATGGAAAATGCTAACAGGGTTGCTATTATaGGTACTCAGTATAGTGTCT +
Preference number: 5 (lower is better)
Translates to: ITPAPTIIRLRISTWKMLTGLLL*VLSIVS
Trigger: AGACACTATACTGAGTACCAATAATAGCAACCCTGT...TAGCATTTTCCATGTGCTGATTCTTAATCTAATTATTGTGGGAGCTGGAGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508124.5
CDS-3UTR CAA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTAGGACAAATCACAGGGTaGCTATTATTGGTACTCAGT +
Preference number: 5 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLGQITG*LLLVLS
Trigger: ACTGAGTACCAATAATAGCAACCCTGTGATTTGTCC...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGGACAAATCACAGGGTaGCTATTATTGGTACTCAGT +
Preference number: 5 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKGQITG*LLLVLS
Trigger: ACTGAGTACCAATAATAGCAACCCTGTGATTTGTCC...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATGTCAGACGCTCTTCTaGGTGGAGGGAAATTATATA +
Preference number: 5 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLCQTLF*VEGNYI
Trigger: TATATAATTTCCCTCCACCAAGAAGAGCGTCTGACA...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAAAACAGAAGCAGGATTaGACAATATGCTGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKKQKQD*TICCSD
Trigger: GTCAGAGCAGCATATTGTCAAATCCTGCTTCTGTTT...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp AGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAGACATCCTGGGGATTACATaGACATTACTTTTGTCTCTA +
Preference number: 5 (lower is better)
Translates to: SKTQHDFFLGHTFLFRKDILGIT*TLLLSL
Trigger: TAGAGACAAAAGTAATGTCAATGTAATCCCCAGGAT...GTCTTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp TTGACAATATGCTGCTCTGACACCCTGAGAATCTTTACTGCAGGCAAAATAAATATCCTGGGGATTACATaGACATTACTTTTGTCTCTA +
Preference number: 5 (lower is better)
Translates to: LTICCSDTLRIFTAGKINILGIT*TLLLSL
Trigger: TAGAGACAAAAGTAATGTCAATGTAATCCCCAGGAT...ATTTATTTTGCCTGCAGTAAAGATTCTCAGGGTGTCAGAGCAGCATATTGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS GCA 90 bp TTATTTATATACATGCTTCCTTTCCACGTCTGCATCCTAATCAACTaGAGATTTTGGTGTTCAATCATCCTTTTCAGTCATCAACCTCTT +
Preference number: 5 (lower is better)
Translates to: LFIYMLPFHVCILIN*RFWCSIILFSHQPL
Trigger: AAGAGGTTGATGACTGAAAAGGATGATTGAACACCAAAATCTGCAGTTGATTAGGATGCAGACGTGGAAAGGAAGCATGTATATAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502247.1
CDS GCA 90 bp CACACATGTAGCATATACACACTAGTGATCTGCCTCAAAGGGAAATaGTTATTAATACCCATAATCTATTGTCACTGTGTCAAATTCTTA +
Preference number: 5 (lower is better)
Translates to: HTCSIYTLVICLKGK*LLIPIIYCHCVKFL
Trigger: TAAGAATTTGACACAGTGACAATAGATTATGGGTATTAATAAGCATTTCCCTTTGAGGCAGATCACTAGTGTGTATATGCTACATGTGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514806.5
CDS GCA 90 bp TTTACAGAGAACTGTTTGAACTCCTGCCAACTTACTGTAATGGAATaGACTTTAATGACTTACATTCTGTTGTCACAGTGGTCAATTATT +
Preference number: 5 (lower is better)
Translates to: FTENCLNSCQLTVME*TLMTYILLSQWSII
Trigger: AATAATTGACCACTGTGACAACAGAATGTAAGTCATTAAAGTGCATTCCATTACAGTAAGTTGGCAGGAGTTCAAACAGTTCTCTGTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515629.5
CDS-3UTR CAA 90 bp TTTATCTCTAAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTAATCCTGGGGATTACATaGACATTACTTTTGTCTCTA +
Preference number: 5 (lower is better)
Translates to: FISKSKTQHDFFLGHTFLILGIT*TLLLSL
Trigger: TAGAGACAAAAGTAATGTCAATGTAATCCCCAGGAT...TAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTTAGAGATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS-3UTR CAA 90 bp AAAAGCAAAACCCAGCATGATTTCTTCCTAGGGCATACATTTCTATTCAGAAAAATCCTGGGGATTACATaGACATTACTTTTGTCTCTA +
Preference number: 5 (lower is better)
Translates to: KSKTQHDFFLGHTFLFRKILGIT*TLLLSL
Trigger: TAGAGACAAAAGTAATGTCAATGTAATCCCCAGGAT...TTTTCTGAATAGAAATGTATGCCCTAGGAAGAAATCATGCTGGGTTTTGCTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000505708.5
ENST00000508124.5
ENST00000515629.5
CDS GCA 72 bp AGCCGGCGCGCCCAGGTGGGCGAGTCCAGTCGGAACTaGAGCCCCGAGTTTGCTCCAGTTCCTTGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: SRRAQVGESSRN*SPEFAPVPCPG
Trigger: GCCGGGACAAGGAACTGGAGCAAACTCGGGGCTGCAGTTCCGACTGGACTCGCCCACCTGGGCGCGCCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS CCA 72 bp GCGGCAATAGCCTGGGTCGCAGGGGCCGGCGGGAGTTaGAGTTCTGAATGCGCCAAGCCCGCGGTCGCTGTC +
Preference number: 6 (lower is better)
Translates to: AAIAWVAGAGGS*SSECAKPAVAV
Trigger: GACAGCGACCGCGGGCTTGGCGCATTCAGAACTCCAACTCCCGCCGGCCCCTGCGACCCAGGCTATTGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS GCA 72 bp GGGTGGAGAGGCTCCTCACTTCTCATACGGGGCGGCTaGCGGGCGGAGGGTCTCCTCTCTTCTCAGACGGGG +
Preference number: 6 (lower is better)
Translates to: GWRGSSLLIRGG*RAEGLLSSQTG
Trigger: CCCCGTCTGAGAAGAGAGGAGACCCTCCGCCCGGCAGCCGCCCCGTATGAGAAGTGAGGAGCCTCTCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS TCA 72 bp AGCCTGGGTCGCAGGGGCCGGCGGGAGTTGGAGTTCTaGATGCGCCAAGCCCGCGGTCGCTGTCAAACCTCT +
Preference number: 6 (lower is better)
Translates to: SLGRRGRRELEF*MRQARGRCQTS
Trigger: AGAGGTTTGACAGCGACCGCGGGCTTGGCGCATTCAGAACTCCAACTCCCGCCGGCCCCTGCGACCCAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS CAA 72 bp AGGTGGGCGAGTCCAGTCGGAACTGCAGCCCCGAGTTaGCTCCAGTTCCTTGTCCCGGCTGGAGGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: RWASPVGTAAPS*LQFLVPAGGWE
Trigger: CTCCCAGCCTCCAGCCGGGACAAGGAACTGGAGCAAACTCGGGGCTGCAGTTCCGACTGGACTCGCCCACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS CCA 72 bp TGCAGCCCCGAGTTTGCTCCAGTTCCTTGTCCCGGCTaGAGGCTGGGAGGGGTAGTAGAAGGAATGCAATCT +
Preference number: 6 (lower is better)
Translates to: CSPEFAPVPCPG*RLGGVVEGMQS
Trigger: AGATTGCATTCCTTCTACTACCCCTCCCAGCCTCCAGCCGGGACAAGGAACTGGAGCAAACTCGGGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS TCA 72 bp CAATCTCTTGCCATTCATAGAGCCCCGGAGGCCACGTaGGAAAACGCTGATGCGGCACCTCCATCGAGGGAT +
Preference number: 6 (lower is better)
Translates to: QSLAIHRAPEAT*ENADAAPPSRD
Trigger: ATCCCTCGATGGAGGTGCCGCATCAGCGTTTTCTCACGTGGCCTCCGGGGCTCTATGAATGGCAAGAGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS CAA 90 bp GAGAAAACGCTGATGCGGCACCTCCATCGAGGGATCACCCCTCTTTaGGGCTTTCCTGGCGCGTGTTGTATGATCTGGTTACGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: EKTLMRHLHRGITPL*GFPGACCMIWLRPW
Trigger: CCAAGGACGTAACCAGATCATACAACACGCGCCAGGAAAGCCCAAAAGAGGGGTGATCCCTCGATGGAGGTGCCGCATCAGCGTTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS TCA 72 bp TGCTTCAGCCCAGGAGATCAAGGCTGCAGCAAGCCATaGTTGCACCATCACACTCCAGTGTGGGCTACAGAG +
Preference number: 6 (lower is better)
Translates to: CFSPGDQGCSKP*LHHHTPVWATE
Trigger: CTCTGTAGCCCACACTGGAGTGTGATGGTGCAATCATGGCTTGCTGCAGCCTTGATCTCCTGGGCTGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505563.5
CDS GCA 72 bp TCAGCCCAGGAGATCAAGGCTGCAGCAAGCCATGATTaGACCATCACACTCCAGTGTGGGCTACAGAGTGAG +
Preference number: 6 (lower is better)
Translates to: SAQEIKAAASHD*TITLQCGLQSE
Trigger: CTCACTCTGTAGCCCACACTGGAGTGTGATGGTGCAATCATGGCTTGCTGCAGCCTTGATCTCCTGGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505563.5
CDS CCA 72 bp CCTCCATCGAGGGATCACCCCTCTTTTGGGCTTTCCTaGCGCGTGTTGTATGATCTGGTTACGTCCTTGGAC +
Preference number: 6 (lower is better)
Translates to: PPSRDHPSFGLS*RVLYDLVTSLD
Trigger: GTCCAAGGACGTAACCAGATCATACAACACGCGCCAGGAAAGCCCAAAAGAGGGGTGATCCCTCGATGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS CAA 72 bp CTGATGCGGCACCTCCATCGAGGGATCACCCCTCTTTaGGGCTTTCCTGGCGCGTGTTGTATGATCTGGTTA +
Preference number: 6 (lower is better)
Translates to: LMRHLHRGITPL*GFPGACCMIWL
Trigger: TAACCAGATCATACAACACGCGCCAGGAAAGCCCAAAAGAGGGGTGATCCCTCGATGGAGGTGCCGCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS CAA 90 bp CCTCCATCGAGGGATCACCCCTCTTTTGGGCTTTCCTGGCGCGTGTaGTATGATCTGGTTACGTCCTTGGACCAGTTCTGGAGAGTCAGA +
Preference number: 6 (lower is better)
Translates to: PPSRDHPSFGLSWRV*YDLVTSLDQFWRVR
Trigger: TCTGACTCTCCAGAACTGGTCCAAGGACGTAACCAGATCATACAACACGCGCCAGGAAAGCCCAAAAGAGGGGTGATCCCTCGATGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS TCA 72 bp GGTCTGGGGCAATCAGTGCCTTGTCTGCAGGAGTGGTaGGCCGGCTGTAGTAATGAATTCTCTTGTTCATGG +
Preference number: 6 (lower is better)
Translates to: GLGQSVPCLQEW*AGCSNEFSCSW
Trigger: CCATGAACAAGAGAATTCATTACTACAGCCGGCTCACCACTCCTGCAGACAAGGCACTGATTGCCCCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000502247.1
ENST00000503817.5
ENST00000503891.5
ENST00000505708.5
ENST00000511233.5
ENST00000512208.5
ENST00000512595.5
ENST00000513993.5
ENST00000514806.5
ENST00000515629.5
CDS TCA 72 bp TCACCCCTCTTTTGGGCTTTCCTGGCGCGTGTTGTATaGTCTGGTTACGTCCTTGGACCAGTTCTGGAGAGT +
Preference number: 6 (lower is better)
Translates to: SPLFWAFLARVV*SGYVLGPVLES
Trigger: ACTCTCCAGAACTGGTCCAAGGACGTAACCAGATCATACAACACGCGCCAGGAAAGCCCAAAAGAGGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS CAA 90 bp TCTTTTGGGCTTTCCTGGCGCGTGTTGTATGATCTGGTTACGTCCTaGGACCAGTTCTGGAGAGTCAGAAGTCTGAGATCAAGGCACCAG +
Preference number: 6 (lower is better)
Translates to: SFGLSWRVLYDLVTS*DQFWRVRSLRSRHQ
Trigger: CTGGTGCCTTGATCTCAGACTTCTGACTCTCCAGAACTGGTCCAAGGACGTAACCAGATCATACAACACGCGCCAGGAAAGCCCAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS CCA 72 bp AGCAGAGCCCAATGGACTATACACATAGCACTCTTCTaGAGCTGGAACTACATGGTCTGGGGCAATCAGTGC +
Preference number: 6 (lower is better)
Translates to: SRAQWTIHIALF*SWNYMVWGNQC
Trigger: GCACTGATTGCCCCAGACCATGTAGTTCCAGCTCCAGAAGAGTGCTATGTGTATAGTCCATTGGGCTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000503817.5
ENST00000503891.5
ENST00000505708.5
ENST00000511233.5
ENST00000512208.5
ENST00000512595.5
ENST00000514806.5
ENST00000515629.5
CDS CCA 72 bp CCTCTTTTGGGCTTTCCTGGCGCGTGTTGTATGATCTaGTTACGTCCTTGGACCAGTTCTGGAGAGTCAGAA +
Preference number: 6 (lower is better)
Translates to: PLLGFPGACCMI*LRPWTSSGESE
Trigger: TTCTGACTCTCCAGAACTGGTCCAAGGACGTAACCAGATCATACAACACGCGCCAGGAAAGCCCAAAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS TCA 72 bp CGATGTTTGTGGGCTCTATACAGAAAGGCCTGGTGTTaGGTAGGTTTCTCCAACTCGGTGGACCTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: RCLWALYRKAWC*VGFSNSVDLSF
Trigger: GAAACTGAGGTCCACCGAGTTGGAGAAACCTACTCAACACCAGGCCTTTCTGTATAGAGCCCACAAACATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512208.5
CDS CCA 72 bp GTGTTGTATGATCTGGTTACGTCCTTGGACCAGTTCTaGAGAGTCAGAAGTCTGAGATCAAGGCACCAGCAG +
Preference number: 6 (lower is better)
Translates to: VLYDLVTSLDQF*RVRSLRSRHQQ
Trigger: CTGCTGGTGCCTTGATCTCAGACTTCTGACTCTCCAGAACTGGTCCAAGGACGTAACCAGATCATACAACAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS CAA 72 bp CTTTCCTGGCGCGTGTTGTATGATCTGGTTACGTCCTaGGACCAGTTCTGGAGAGTCAGAAGTCTGAGATCA +
Preference number: 6 (lower is better)
Translates to: LSWRVLYDLVTS*DQFWRVRSLRS
Trigger: TGATCTCAGACTTCTGACTCTCCAGAACTGGTCCAAGGACGTAACCAGATCATACAACACGCGCCAGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504880.5
CDS CCA 72 bp AGCAGAGCCCAATGGACTATACACATAGCACTCTTCTaGAGCTGGAACTACATGGTCTGGGGCAATCTTTTG +
Preference number: 6 (lower is better)
Translates to: SRAQWTIHIALF*SWNYMVWGNLL
Trigger: CAAAAGATTGCCCCAGACCATGTAGTTCCAGCTCCAGAAGAGTGCTATGTGTATAGTCCATTGGGCTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416547.6
ENST00000508124.5
CDS CAA 72 bp ACGATGTTTGTGGGCTCTATACAGAAAGGCCTGGTGTaGAGTAGGTTTCTCCAACTCGGTGGACCTCAGTTT +
Preference number: 6 (lower is better)
Translates to: TMFVGSIQKGLV*SRFLQLGGPQF
Trigger: AAACTGAGGTCCACCGAGTTGGAGAAACCTACTCAACACCAGGCCTTTCTGTATAGAGCCCACAAACATCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512208.5
CDS CAA 90 bp TTCACATTCACGATGTTTGTGGGCTCTATACAGAAAGGCCTGGTGTaGAGTAGGTTTCTCCAACTCGGTGGACCTCAGTTTCCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: FTFTMFVGSIQKGLV*SRFLQLGGPQFPSL
Trigger: CAGAGAAGGAAACTGAGGTCCACCGAGTTGGAGAAACCTACTCAACACCAGGCCTTTCTGTATAGAGCCCACAAACATCGTGAATGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512208.5
CDS CCA 72 bp GCCCAATGGACTATACACATAGCACTCTTCTGGAGCTaGAACTACATGGTCTGGGGCAATCTTTTGGATCTT +
Preference number: 6 (lower is better)
Translates to: AQWTIHIALFWS*NYMVWGNLLDL
Trigger: AAGATCCAAAAGATTGCCCCAGACCATGTAGTTCCAGCTCCAGAAGAGTGCTATGTGTATAGTCCATTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416547.6
ENST00000508124.5
CDS CAA 72 bp GAATCAGCACATGGAAAATGCTGCTTGCACAGTCATTaGTTGCTTGGCACATCCTGCTGGTCAAGAGAAGAG +
Preference number: 6 (lower is better)
Translates to: ESAHGKCCLHSH*LLGTSCWSREE
Trigger: CTCTTCTCTTGACCAGCAGGATGTGCCAAGCAACAAATGACTGTGCAAGCAGCATTTTCCATGTGCTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000515159.5
CDS CAA 72 bp CAGTCACACTTTAAACTGACCTGCTTGCACAGTCATTaGTTGCTTGGCACATCCTGCTGGTCAAGAGAAGAG +
Preference number: 6 (lower is better)
Translates to: QSHFKLTCLHSH*LLGTSCWSREE
Trigger: CTCTTCTCTTGACCAGCAGGATGTGCCAAGCAACAAATGACTGTGCAAGCAGGTCAGTTTAAAGTGTGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515754.1
CDS CAA 90 bp ACGTTTAAGCAAGTCAAAGCTCTCATTAGCTTAGTCCTACTGGTGTaGAGTAGGTTTCTCCAACTCGGTGGACCTCAGTTTCCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: TFKQVKALISLVLLV*SRFLQLGGPQFPSL
Trigger: CAGAGAAGGAAACTGAGGTCCACCGAGTTGGAGAAACCTACTCAACACCAGTAGGACTAAGCTAATGAGAGCTTTGACTTGCTTAAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507109.5
CDS CCA 72 bp TCAACTTATAGTGTGCTCATCTACAGAGCACGGCAATaGATAAGACACTGCCTGGGAGTCATGACAATTAGG +
Preference number: 6 (lower is better)
Translates to: STYSVLIYRARQ*IRHCLGVMTIR
Trigger: CCTAATTGTCATGACTCCCAGGCAGTGTCTTATCCATTGCCGTGCTCTGTAGATGAGCACACTATAAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506624.5
CDS CAA 72 bp CAAGTCAAAGCTCTCATTAGCTTAGTCCTACTGGTGTaGAGTAGGTTTCTCCAACTCGGTGGACCTCAGTTT +
Preference number: 6 (lower is better)
Translates to: QVKALISLVLLV*SRFLQLGGPQF
Trigger: AAACTGAGGTCCACCGAGTTGGAGAAACCTACTCAACACCAGTAGGACTAAGCTAATGAGAGCTTTGACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507109.5
CDS TCA 72 bp GAACTTGGGAAAAACTTATTCAGGAAACTCTGGTGTTaGGTAGGTTTCTCCAACTCGGTGGACCTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: ELGKNLFRKLWC*VGFSNSVDLSF
Trigger: GAAACTGAGGTCCACCGAGTTGGAGAAACCTACTCAACACCAGAGTTTCCTGAATAAGTTTTTCCCAAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502416.5
ENST00000507216.1
ENST00000513275.5
ENST00000513993.5
CDS TCA 72 bp TCAAACTGGATATTCATAGGTCCAGGATCTCTTTCATaGTCTACCTCAGAGGTGCCAAGATGCCTAGAATCA +
Preference number: 6 (lower is better)
Translates to: SNWIFIGPGSLS*STSEVPRCLES
Trigger: TGATTCTAGGCATCTTGGCACCTCTGAGGTAGATCATGAAAGAGATCCTGGACCTATGAATATCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000318672.7
ENST00000396865.7
ENST00000416547.6
ENST00000503891.5
ENST00000504880.5
ENST00000505563.5
ENST00000506624.5
ENST00000507109.5
ENST00000508124.5
ENST00000511233.5
ENST00000513993.5
ENST00000514806.5
CDS CAA 72 bp AGAACTTGGGAAAAACTTATTCAGGAAACTCTGGTGTaGAGTAGGTTTCTCCAACTCGGTGGACCTCAGTTT +
Preference number: 6 (lower is better)
Translates to: RTWEKLIQETLV*SRFLQLGGPQF
Trigger: AAACTGAGGTCCACCGAGTTGGAGAAACCTACTCAACACCAGAGTTTCCTGAATAAGTTTTTCCCAAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502416.5
ENST00000507216.1
ENST00000513275.5
ENST00000513993.5
CDS CAA 72 bp TCCTTTCCACGTCTGCATCCTAATCAACTGCAGATTTaGGTGTTCAATCATCCTTTTCAGTCATCAACCTCT +
Preference number: 6 (lower is better)
Translates to: SFPRLHPNQLQI*VFNHPFQSSTS
Trigger: AGAGGTTGATGACTGAAAAGGATGATTGAACACCAAAATCTGCAGTTGATTAGGATGCAGACGTGGAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502247.1
CDS CAA 90 bp ATACATGCTTCCTTTCCACGTCTGCATCCTAATCAACTGCAGATTTaGGTGTTCAATCATCCTTTTCAGTCATCAACCTCTTCAGTTCCT +
Preference number: 6 (lower is better)
Translates to: IHASFPRLHPNQLQI*VFNHPFQSSTSSVP
Trigger: AGGAACTGAAGAGGTTGATGACTGAAAAGGATGATTGAACACCAAAATCTGCAGTTGATTAGGATGCAGACGTGGAAAGGAAGCATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502247.1
CDS GCA 72 bp TGTTCATATCAGGGAAATTGCCAGCAAACATTTGGCTaGCAAAGAACTTCTGGAGTCAAGGAAATCAAGAAA +
Preference number: 6 (lower is better)
Translates to: CSYQGNCQQTFG*QRTSGVKEIKK
Trigger: TTTCTTGATTTCCTTGACTCCAGAAGTTCTTTGGCAGCCAAATGTTTGCTGGCAATTTCCCTGATATGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515159.5
CDS TCA 72 bp ACAAATATTCCTATTCCCAAGGGAGTAGGCTTTGTATaGGTTTGTTCATATCAGGGAAATTGCCAGCAAACA +
Preference number: 6 (lower is better)
Translates to: TNIPIPKGVGFV*VCSYQGNCQQT
Trigger: TGTTTGCTGGCAATTTCCCTGATATGAACAAACTCATACAAAGCCTACTCCCTTGGGAATAGGAATATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515159.5
CDS GCA 72 bp GAAGAGGACACCAATGATCTATCTTTAGTCACCACTTaGATTAGGCATTTTTATAGCAAAAGGATCAGTCAC +
Preference number: 6 (lower is better)
Translates to: EEDTNDLSLVTT*IRHFYSKRISH
Trigger: GTGACTGATCCTTTTGCTATAAAAATGCCTAATGCAAGTGGTGACTAAAGATAGATCATTGGTGTCCTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515754.1
CDS GCA 72 bp TACATAATAGTAGACATTTATTTGAGTACCACAAGGTaGCTGGCATGTAGTACATTATCTCAGAGTCCATCT +
Preference number: 6 (lower is better)
Translates to: YIIVDIYLSTTR*LACSTLSQSPS
Trigger: AGATGGACTCTGAGATAATGTACTACATGCCAGGCACCTTGTGGTACTCAAATAAATGTCTACTATTATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515159.5
CDS GCA 72 bp AGCATATACACACTAGTGATCTGCCTCAAAGGGAAATaGTTATTAATACCCATAATCTATTGTCACTGTGTC +
Preference number: 6 (lower is better)
Translates to: SIYTLVICLKGK*LLIPIIYCHCV
Trigger: GACACAGTGACAATAGATTATGGGTATTAATAAGCATTTCCCTTTGAGGCAGATCACTAGTGTGTATATGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514806.5
CDS CAA 90 bp TCAGCCTGCAATTTATTTAACATTAAAGCAACAGCAAAGACAATTTaGTCCTTCACCACAGATAGATCGAGAAAGCATTGCTTTATGTGG +
Preference number: 6 (lower is better)
Translates to: SACNLFNIKATAKTI*SFTTDRSRKHCFMW
Trigger: CCACATAAAGCAATGCTTTCTCGATCTATCTGTGGTGAAGGACAAAATTGTCTTTGCTGTTGCTTTAATGTTAAATAAATTGCAGGCTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515159.5
CDS CAA 90 bp TCCCCACAAAAAGAGAAATATATGTACATAATAGTAGACATTTATTaGAGTACCACAAGGTGCCTGGCATGTAGTACATTATCTCAGAGT +
Preference number: 6 (lower is better)
Translates to: SPQKEKYMYIIVDIY*STTRCLACSTLSQS
Trigger: ACTCTGAGATAATGTACTACATGCCAGGCACCTTGTGGTACTCAAATAAATGTCTACTATTATGTACATATATTTCTCTTTTTGTGGGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515159.5
CDS TCA 72 bp GAGTGCCTAGGTAGTTATGCCATGATTGTAAATAGCTaGTTCCCTCTCATTTCAACAAGTTTCATTATAGAA +
Preference number: 6 (lower is better)
Translates to: ECLGSYAMIVNS*FPLISTSFIIE
Trigger: TTCTATAATGAAACTTGTTGAAATGAGAGGGAATCAGCTATTTACAATCATGGCATAACTACCTAGGCACTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502247.1
CDS TCA 72 bp AGAGCCCTAGGTAGTTATGCCATGATTGTAAATAGCTaGTTCCCTCTCATTTCAACAAGTTTCATTATAGAA +
Preference number: 6 (lower is better)
Translates to: RALGSYAMIVNS*FPLISTSFIIE
Trigger: TTCTATAATGAAACTTGTTGAAATGAGAGGGAATCAGCTATTTACAATCATGGCATAACTACCTAGGGCTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512595.5
CDS TCA 72 bp AAAGGCCTAGGTAGTTATGCCATGATTGTAAATAGCTaGTTCCCTCTCATTTCAACAAGTTTCATTATAGAA +
Preference number: 6 (lower is better)
Translates to: KGLGSYAMIVNS*FPLISTSFIIE
Trigger: TTCTATAATGAAACTTGTTGAAATGAGAGGGAATCAGCTATTTACAATCATGGCATAACTACCTAGGCCTTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505708.5
ENST00000515629.5