RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC35B4 (Homo sapiens)

Ensembl gene IDs: ENSG00000205060

Ensembl transcript IDs: ENST00000378509.9, ENST00000416907.5, ENST00000466599.1, ENST00000470969.2

Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTGCCCGGCTGGGCCAACAGGGACAGCCATGGCTCTTGCGGTGCTaGGCAGGGCCATCCTGCCGTCACCACTGTGGCCTAGGCAATGGG +
Preference number: 1 (lower is better)
Translates to: SARLGQQGQPWLLRC*AGPSCRHHCGLGNG
Trigger: CCCATTGCCTAGGCCACAGTGGTGACGGCAGGATGGCCCTGCTCAGCACCGCAAGAGCCATGGCTGTCCCTGTTGGCCCAGCCGGGCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR TCA 90 bp CGGGCAGAGGGGAATCTCCTGGTGGTGAAGCCTTATCCTCCCACTTaGGACCCACCCTTCTGCCCTGTGAGTGCCCGGCTGGGCCAACAG +
Preference number: 1 (lower is better)
Translates to: RAEGNLLVVKPYPPT*DPPFCPVSARLGQQ
Trigger: CTGTTGGCCCAGCCGGGCACTCACAGGGCAGAAGGGTGGGTCTCAAGTGGGAGGATAAGGCTTCACCACCAGGAGATTCCCCTCTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 90 bp TGGCTCAGCACTGCGGGTAGCTCGGCATTAACAAAAGCGAAACGGTaGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCT +
Preference number: 1 (lower is better)
Translates to: WLSTAGSSALTKAKR*SDLHRVPPSRRHWS
Trigger: AGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGTTAATGCCGAGCTACCCGCAGTGCTGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
3UTR CCA 90 bp AAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTaGTCTACGTACTCCAGACAGGCCTCAGTTCTTCTTGCTGTCCTT +
Preference number: 1 (lower is better)
Translates to: KRWSDLHRVPPSRRH*STYSRQASVLLAVL
Trigger: AAGGACAGCAAGAAGAACTGAGGCCTGTCTGGAGTACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR TCA 90 bp GGTCTACGTACTCCAGACAGGCCTCAGTTCTTCTTGCTGTCCTTCTaGGGCTCACTTTTTGTGGTCCCTAGGTTGTTCCACACCTCTGTG +
Preference number: 1 (lower is better)
Translates to: GLRTPDRPQFFLLSF*GSLFVVPRLFHTSV
Trigger: CACAGAGGTGTGGAACAACCTAGGGACCACAAAAAGTGAGCCTCAGAAGGACAGCAAGAAGAACTGAGGCCTGTCTGGAGTACGTAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR GCA 90 bp GCCACCGTGCCCGGCACAACCTTTCTTTGTTATGAACACTGTGTCTaGTGTGAGATATGCTGCAGGGCCGCCCTAATCACAGAAAGCAAT +
Preference number: 1 (lower is better)
Translates to: ATVPGTTFLCYEHCV*CEICCRAALITESN
Trigger: ATTGCTTTCTGTGATTAGGGCGGCCCTGCAGCATATCTCACAGCAGACACAGTGTTCATAACAAAGAAAGGTTGTGCCGGGCACGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR GCA 90 bp GTGTACATTAAGGTCCCAATGAAGACAAACAAGGTGCCCAGCCAGTaGCACAGGGTGAAGGGGTTCTGGAAGTACAAGATGGAAAAGATG +
Preference number: 1 (lower is better)
Translates to: VYIKVPMKTNKVPSQ*HRVKGFWKYKMEKM
Trigger: CATCTTTTCCATCTTGTACTTCCAGAACCCCTTCACCCTGTGGCACTGGCTGGGCACCTTGTTTGTCTTCATTGGGACCTTAATGTACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR CCA 90 bp CCATCAGAGAATAGCTCTGGACAGTGGAATAAACATACCACACCATaGAATGAGCCCAGGAGACCTGCAGAGCCACGTCTCAGTTTAAGA +
Preference number: 1 (lower is better)
Translates to: PSENSSGQWNKHTTP*NEPRRPAEPRLSLR
Trigger: TCTTAAACTGAGACGTGGCTCTGCAGGTCTCCTGGGCTCATTCCATGGTGTGGTATGTTTATTCCACTGTCCAGAGCTATTCTCTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 90 bp CTCCACTGCTGTTGCTCAAATCCATCAGAGAATAGCTCTGGACAGTaGAATAAACATACCACACCATGGAATGAGCCCAGGAGACCTGCA +
Preference number: 1 (lower is better)
Translates to: LHCCCSNPSENSSGQ*NKHTTPWNEPRRPA
Trigger: TGCAGGTCTCCTGGGCTCATTCCATGGTGTGGTATGTTTATTCCACTGTCCAGAGCTATTCTCTGATGGATTTGAGCAACAGCAGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 90 bp ACATCACGCCATCTTTCCAGAAGAAGAGAAGAGGTTTACTCTGGGTaGCACAGACCAATTCAGCTTTCATGGTCTTCCTCCGTAGCACTG +
Preference number: 1 (lower is better)
Translates to: TSRHLSRRREEVYSG*HRPIQLSWSSSVAL
Trigger: CAGTGCTACGGAGGAAGACCATGAAAGCTGAATTGGTCTGTGCCACCCAGAGTAAACCTCTTCTCTTCTTCTGGAAAGATGGCGTGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR TCA 90 bp ATCACACACTATATATCTCCATCTATGCATTCCCTTGATGGGTCGTaGCTCTTAACAGAGTCATCGGGCAGAGGGGAATCTCCTGGTGGT +
Preference number: 1 (lower is better)
Translates to: ITHYISPSMHSLDGS*LLTESSGRGESPGG
Trigger: ACCACCAGGAGATTCCCCTCTGCCCGATGACTCTGTTAAGAGTCACGACCCATCAAGGGAATGCATAGATGGAGATATATAGTGTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 90 bp TACACACACACACACACAGTCTTTGTCTATAGGCAAACAGAGAAGTaGCCGGTGAGTTCAGCTGCTTACAGAGGAGCATGTACTGGTATG +
Preference number: 1 (lower is better)
Translates to: YTHTHTVFVYRQTEK*PVSSAAYRGACTGM
Trigger: CATACCAGTACATGCTCCTCTGTAAGCAGCTGAACTCACCGGCCACTTCTCTGTTTGCCTATAGACAAAGACTGTGTGTGTGTGTGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 90 bp AATGTTTCCCCTTATTTGCTTTCTTGCCAACCCGCTGATGAGGAGTaGGAACAGGTATCACGAACCCTCAGGTTTTCCAGAAACTTGAGG +
Preference number: 1 (lower is better)
Translates to: NVSPYLLSCQPADEE*EQVSRTLRFSRNLR
Trigger: CCTCAAGTTTCTGGAAAACCTGAGGGTTCGTGATACCTGTTCCCACTCCTCATCAGCGGGTTGGCAAGAAAGCAAATAAGGGGAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR TCA 90 bp ACACACACACAGTCTTTGTCTATAGGCAAACAGAGAAGTGGCCGGTaGGTTCAGCTGCTTACAGAGGAGCATGTACTGGTATGTAAGGTT +
Preference number: 1 (lower is better)
Translates to: THTQSLSIGKQRSGR*VQLLTEEHVLVCKV
Trigger: AACCTTACATACCAGTACATGCTCCTCTGTAAGCAGCTGAACTCACCGGCCACTTCTCTGTTTGCCTATAGACAAAGACTGTGTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 90 bp AAAAACATCACGCCATCTTTCCAGAAGAAGAGAAGAGGTTTACTCTaGGTGGCACAGACCAATTCAGCTTTCATGGTCTTCCTCCGTAGC +
Preference number: 1 (lower is better)
Translates to: KNITPSFQKKRRGLL*VAQTNSAFMVFLRS
Trigger: GCTACGGAGGAAGACCATGAAAGCTGAATTGGTCTGTGCCACCCAGAGTAAACCTCTTCTCTTCTTCTGGAAAGATGGCGTGATGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 90 bp AATGAGGCCATTCTCTGGAATGAAAGCAACTGGCACAGAAATGACTaGCAATCGCAAGTGATACACAAAGGCATTTTTATTGCGCCGGGG +
Preference number: 1 (lower is better)
Translates to: NEAILWNESNWHRND*QSQVIHKGIFIAPG
Trigger: CCCCGGCGCAATAAAAATGCCTTTGTGTATCACTTGCGATTGCCAGTCATTTCTGTGCCAGTTGCTTTCATTCCAGAGAATGGCCTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR GCA 90 bp TCCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTaGGAGTGTTCTAATCTAATCTATTCCCTGCCCATACATAGCCTC +
Preference number: 1 (lower is better)
Translates to: SQGIWGFLLLYVVIL*ECSNLIYSLPIHSL
Trigger: GAGGCTATGTATGGGCAGGGAATAGATTAGATTAGAACACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 90 bp AGAGAAGTGGCCGGTGAGTTCAGCTGCTTACAGAGGAGCATGTACTaGTATGTAAGGTTCCAGCTAAGTAAAGAAAAGGGATGTGAAAGT +
Preference number: 1 (lower is better)
Translates to: REVAGEFSCLQRSMY*YVRFQLSKEKGCES
Trigger: ACTTTCACATCCCTTTTCTTTACTTAGCTGGAACCTTACATACCAGTACATGCTCCTCTGTAAGCAGCTGAACTCACCGGCCACTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 90 bp ACATGCTACTTTAAAGCCAAGAGGGGCCAGTCTCCCATTCCAGCTTaGTACACACTGAACACATTTGAGGCTTATGACTGGTTCTTTTAC +
Preference number: 1 (lower is better)
Translates to: TCYFKAKRGQSPIPA*YTLNTFEAYDWFFY
Trigger: GTAAAAGAACCAGTCATAAGCCTCAAATGTGTTCAGTGTGTACCAAGCTGGAATGGGAGACTGGCCCCTCTTGGCTTTAAAGTAGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 90 bp CGAAACCCGGAAGTGGAAGGGCGTGATTATAAAACAAAGCCTCCTTaGAGTGTTTCCCAAATCGTTTGTAGAGAGTCTCTTGGAATATCC +
Preference number: 1 (lower is better)
Translates to: RNPEVEGRDYKTKPP*SVSQIVCRESLGIS
Trigger: GGATATTCCAAGAGACTCTCTACAAACGATTTGGGAAACACTCCAAGGAGGCTTTGTTTTATAATCACGCCCTTCCACTTCCGGGTTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR CCA 90 bp TGCATGGTCATAAATATCAGAAGCCAAGAAGACGAAACCCGGAAGTaGAAGGGCGTGATTATAAAACAAAGCCTCCTTGGAGTGTTTCCC +
Preference number: 1 (lower is better)
Translates to: CMVINIRSQEDETRK*KGVIIKQSLLGVFP
Trigger: GGGAAACACTCCAAGGAGGCTTTGTTTTATAATCACGCCCTTCCACTTCCGGGTTTCGTCTTCTTGGCTTCTGATATTTATGACCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR TCA 90 bp TCTGGAATGAAAGCAACTGGCACAGAAATGACTGGCAATCGCAAGTaGTACACAAAGGCATTTTTATTGCGCCGGGGAATAACCACTACT +
Preference number: 1 (lower is better)
Translates to: SGMKATGTEMTGNRK*YTKAFLLRRGITTT
Trigger: AGTAGTGGTTATTCCCCGGCGCAATAAAAATGCCTTTGTGTATCACTTGCGATTGCCAGTCATTTCTGTGCCAGTTGCTTTCATTCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR TCA 90 bp TTAAAGCCAAGAGGGGCCAGTCTCCCATTCCAGCTTGGTACACACTaGACACATTTGAGGCTTATGACTGGTTCTTTTACTTACAAATAT +
Preference number: 1 (lower is better)
Translates to: LKPRGASLPFQLGTH*THLRLMTGSFTYKY
Trigger: ATATTTGTAAGTAAAAGAACCAGTCATAAGCCTCAAATGTGTTCAGTGTGTACCAAGCTGGAATGGGAGACTGGCCCCTCTTGGCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR TCA 90 bp ACTTGTAATGTTTTCATCAACATAAAATGGGTGACATTATGTATGTaGGGCTGCATCCTATTAAGAGTTCAGAGACTCCAGATCCATAGC +
Preference number: 1 (lower is better)
Translates to: TCNVFINIKWVTLCM*GCILLRVQRLQIHS
Trigger: GCTATGGATCTGGAGTCTCTGAACTCTTAATAGGATGCAGCCTCACATACATAATGTCACCCATTTTATGTTGATGAAAACATTACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CAA 90 bp TCGGGCAGAGGGGAATCTCCTGGTGGTGAAGCCTTATCCTCCCACTaGAGACCCACCCTTCTGCCCTGTGAGTGCCCGGCTGGGCCAACA +
Preference number: 2 (lower is better)
Translates to: SGRGESPGGEALSSH*RPTLLPCECPAGPT
Trigger: TGTTGGCCCAGCCGGGCACTCACAGGGCAGAAGGGTGGGTCTCAAGTGGGAGGATAAGGCTTCACCACCAGGAGATTCCCCTCTGCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR CCA 90 bp GCTCTTGCGGTGCTGAGCAGGGCCATCCTGCCGTCACCACTGTGGCCTAGGCAATCCTTCCCAAAACGCTaGAGGAAGTCCAGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: ALAVLSRAILPSPLWPRQSFPKR*RKSSPA
Trigger: AGCAGGGCTGGACTTCCTCCAGCGTTTTGGGAAGGA...TTGCCTAGGCCACAGTGGTGACGGCAGGATGGCCCTGCTCAGCACCGCAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR GCA 90 bp CGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTAAAGGTGCCCAGCCAGTaGCACAGGGTGAAGGGGTTC +
Preference number: 2 (lower is better)
Translates to: RNGGQTFTGSHPHDDTGLKVPSQ*HRVKGF
Trigger: GAACCCCTTCACCCTGTGGCACTGGCTGGGCACCTT...TAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR-3UTR TCA 90 bp GCCGGTGAGTTCAGCTGCTTACAGAGGAGCATGTACTGGTATGTAAGGTTCCAGCACCCTTCTGCCCTGTaGGTGCCCGGCTGGGCCAAC +
Preference number: 2 (lower is better)
Translates to: AGEFSCLQRSMYWYVRFQHPSAL*VPGWAN
Trigger: GTTGGCCCAGCCGGGCACTCACAGGGCAGAAGGGTG...CTGGAACCTTACATACCAGTACATGCTCCTCTGTAAGCAGCTGAACTCACCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR CCA 90 bp AACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTTTCCTTTTGCACGGCTaGCTCAGCACTGCGGGTAGC +
Preference number: 2 (lower is better)
Translates to: NGGQTFTGSHPHDDTGLRFLLHG*LSTAGS
Trigger: GCTACCCGCAGTGCTGAGCCAGCCGTGCAAAAGGAA...ACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
3UTR-3UTR GCA 90 bp ACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTAGAGGAAGTCCAGCCCTaGTGTTACTGGTGTCTCGGT +
Preference number: 2 (lower is better)
Translates to: TVVRPSQGPTLTTTLVYVEEVQP*CYWCLG
Trigger: ACCGAGACACCAGTAACAGCAGGGCTGGACTTCCTC...TACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR CCA 90 bp CGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACCCTCACGACGACACTaGTCTACGTACTCCAGACAG +
Preference number: 2 (lower is better)
Translates to: RNGGQTFTGSHPHDDTGLPSRRH*STYSRQ
Trigger: CTGTCTGGAGTACGTAGACCAGTGTCGTCGTGAGGG...TAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
3UTR-3UTR GCA 90 bp GCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTCTGAAGATTTCCTTTTaGACGGCTGGCTCAGCACTG +
Preference number: 2 (lower is better)
Translates to: AKRWSDLHRVPPSRRHWSLKISF*TAGSAL
Trigger: CAGTGCTGAGCCAGCCGTGCAAAAGGAAATCTTCAG...AGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
3UTR-3UTR TCA 90 bp ACGACGAGCGTGACGGTGAGGGAGGCGCATTCTGTGGTGAGGATAAACACACCCCGGATGCACACGTACTaGGTGATGATGTTCATGAGG +
Preference number: 2 (lower is better)
Translates to: TTSVTVREAHSVVRINTPRMHTY*VMMFMR
Trigger: CCTCATGAACATCATCACTCAGTACGTGTGCATCCG...GGGTGTGTTTATCCTCACCACAGAATGCGCCTCCCTCACCGTCACGCTCGTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR-3UTR TCA 90 bp CCTCCATGTGCATTTCTCTGTCCGTTTAGGTCAATGCCAACTGGTCCACCAGTGACACTGTGTCTGCTGTaGGATATGCTGCAGGGCCGC +
Preference number: 2 (lower is better)
Translates to: PPCAFLCPFRSMPTGPPVTLCLL*DMLQGR
Trigger: GCGGCCCTGCAGCATATCTCACAGCAGACACAGTGT...CACTGGTGGACCAGTTGGCATTGACCTAAACGGACAGAGAAATGCACATGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR TCA 90 bp CACACAGACTACACAAGAGCACACAGAAGCTACGCATATTACAGCAACAGCGTTTGGCTCTTGCGGTGCTaGGCAGGGCCATCCTGCCGT +
Preference number: 2 (lower is better)
Translates to: HTDYTRAHRSYAYYSNSVWLLRC*AGPSCR
Trigger: ACGGCAGGATGGCCCTGCTCAGCACCGCAAGAGCCA...AACGCTGTTGCTGTAATATGCGTAGCTTCTGTGTGCTCTTGTGTAGTCTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR TCA 90 bp AAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTTCTTGCTGTCCTTCTaGGGCTCACTTTTTGTGGTC +
Preference number: 2 (lower is better)
Translates to: KRWSDLHRVPPSRRHWSTFLLSF*GSLFVV
Trigger: GACCACAAAAAGTGAGCCTCAGAAGGACAGCAAGAA...CGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR-3UTR TCA 90 bp TCTACATGTGTCAGTCTGAGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTGGTGCCTGCAGCGTCTaGCTGACTGTGAGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: STCVSLSNVRSPLLKISFGACSV*LTVRCC
Trigger: GCAGCACCTCACAGTCAGTCAGACGCTGCAGGCACC...AAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCTCAGACTGACACATGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR TCA 90 bp CCTCCATGTGCATTTCTCTGTCCGTTTAGGTCAATGCCAACTGGTCCACCAGTGCAGAGAAGTGGCCGGTaGGTTCAGCTGCTTACAGAG +
Preference number: 2 (lower is better)
Translates to: PPCAFLCPFRSMPTGPPVQRSGR*VQLLTE
Trigger: CTCTGTAAGCAGCTGAACTCACCGGCCACTTCTCTG...CACTGGTGGACCAGTTGGCATTGACCTAAACGGACAGAGAAATGCACATGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR TCA 90 bp CCTTCTGAGGCTCACTTTTTGTGGTCCCTAGGTTGTTCCACACCTCTGTGTACAGCCAGTGCCACAGGGTaGAGGGGTTCTGGAAGTACA +
Preference number: 2 (lower is better)
Translates to: PSEAHFLWSLGCSTPLCTASATG*RGSGST
Trigger: TGTACTTCCAGAACCCCTTCACCCTGTGGCACTGGC...TGTACACAGAGGTGTGGAACAACCTAGGGACCACAAAAAGTGAGCCTCAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR CAA 90 bp AAGGGGTTCTGGAAGTACAAGATGGAAAAGATGAGGCTCACAAATTaGCGTAGGGTCACGACGAGCGTGACGGTGAGGGAGGCGCATTCT +
Preference number: 2 (lower is better)
Translates to: KGFWKYKMEKMRLTN*RRVTTSVTVREAHS
Trigger: AGAATGCGCCTCCCTCACCGTCACGCTCGTCGTGACCCTACGCAAATTTGTGAGCCTCATCTTTTCCATCTTGTACTTCCAGAACCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR-3UTR CCA 90 bp CCAAAACGCTGGAGGAAGTCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTTGACAAAAGCGAAACGGTaGTCAGACCTTCACAGGGTC +
Preference number: 2 (lower is better)
Translates to: PKRWRKSSPAVTGVSVYLTKAKR*SDLHRV
Trigger: GACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGT...CAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGACTTCCTCCAGCGTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR CCA 90 bp CCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGTTCTGTGGCCTAGGCAATaGGCTTCAGGGGTGTCCAGT +
Preference number: 2 (lower is better)
Translates to: PREFGAFCFYMWSSCASVLWPRQ*ASGVSS
Trigger: ACTGGACACCCCTGAAGCCCATTGCCTAGGCCACAG...AACACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR CCA 90 bp AGATCAGACCAACAGACAGTGATCTCCAGGCATCAGCTTCAGCTGCTACAAGCTCCCGCTGATGAGGAGTaGGAACAGGTATCACGAACC +
Preference number: 2 (lower is better)
Translates to: RSDQQTVISRHQLQLLQAPADEE*EQVSRT
Trigger: GGTTCGTGATACCTGTTCCCACTCCTCATCAGCGGG...AGCTTGTAGCAGCTGAAGCTGATGCCTGGAGATCACTGTCTGTTGGTCTGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR TCA 90 bp GGTTTACTCTGGGTGGCACAGACCAATTCAGCTTTCATGGTCTTCCTCCGTAGCTCCCTTGATGGGTCGTaGCTCTTAACAGAGTCATCG +
Preference number: 2 (lower is better)
Translates to: GLLWVAQTNSAFMVFLRSSLDGS*LLTESS
Trigger: CGATGACTCTGTTAAGAGTCACGACCCATCAAGGGA...GCTACGGAGGAAGACCATGAAAGCTGAATTGGTCTGTGCCACCCAGAGTAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR TCA 90 bp GGAGGCGCATTCTGTGGTGAGGATAAACACACCCCGGATGCACACGTACTGAGTTATCCCCATCCTTGCTaGCATCAGAAGAGCAAAAGT +
Preference number: 2 (lower is better)
Translates to: GGAFCGEDKHTPDAHVLSYPHPC*HQKSKS
Trigger: ACTTTTGCTCTTCTGATGTCAGCAAGGATGGGGATA...ACTCAGTACGTGTGCATCCGGGGTGTGTTTATCCTCACCACAGAATGCGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR-3UTR CCA 90 bp AGCCAAGAAGACGAAACCCGGAAGTGGAAGGGCGTGATTATAAAACAAAGCCTCCCCTCACGACGACACTaGTCTACGTACTCCAGACAG +
Preference number: 2 (lower is better)
Translates to: SQEDETRKWKGVIIKQSLPSRRH*STYSRQ
Trigger: CTGTCTGGAGTACGTAGACCAGTGTCGTCGTGAGGG...GAGGCTTTGTTTTATAATCACGCCCTTCCACTTCCGGGTTTCGTCTTCTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR-3UTR CCA 90 bp GACGAAACCCGGAAGTGGAAGGGCGTGATTATAAAACAAAGCCTCCTTGGAGTGACAAAAGCGAAACGGTaGTCAGACCTTCACAGGGTC +
Preference number: 2 (lower is better)
Translates to: DETRKWKGVIIKQSLLGVTKAKR*SDLHRV
Trigger: GACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGT...CACTCCAAGGAGGCTTTGTTTTATAATCACGCCCTTCCACTTCCGGGTTTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR-3UTR CCA 90 bp CACACAGACTACACAAGAGCACACAGAAGCTACGCATATTACAGCAACAGCGTTTTGCTGCACTGTCACTaGGAATCAGCTCAGGGGAAC +
Preference number: 2 (lower is better)
Translates to: HTDYTRAHRSYAYYSNSVLLHCH*ESAQGN
Trigger: GTTCCCCTGAGCTGATTCCCAGTGACAGTGCAGCAA...AACGCTGTTGCTGTAATATGCGTAGCTTCTGTGTGCTCTTGTGTAGTCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR GCA 90 bp TTTGTGGTCCCTAGGTTGTTCCACACCTCTGTGTACATTAAGGTCCCAATGAAGCTGAAGATTTCCTTTTaGACGGCTGGCTCAGCACTG +
Preference number: 2 (lower is better)
Translates to: FVVPRLFHTSVYIKVPMKLKISF*TAGSAL
Trigger: CAGTGCTGAGCCAGCCGTGCAAAAGGAAATCTTCAG...CTTCATTGGGACCTTAATGTACACAGAGGTGTGGAACAACCTAGGGACCACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR-3UTR GCA 90 bp GAATACCCACTAATGTCTTGTAGCTGTTCTACGTACTCTCAGCTTTCTACTCCCGTGCAGCCACTTCCGTaGCCTTTGATCACACACAGA +
Preference number: 2 (lower is better)
Translates to: EYPLMSCSCSTYSQLSTPVQPLP*PLITHR
Trigger: TCTGTGTGTGATCAAAGGGCACGGAAGTGGCTGCAC...GGGAGTAGAAAGCTGAGAGTACGTAGAACAGCTACAAGACATTAGTGGGTATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR TCA 90 bp CCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGTTCCCAAGTACTGTCTGTaGACATCAACACATACCCAA +
Preference number: 2 (lower is better)
Translates to: PREFGAFCFYMWSSCASVPKYCL*TSTHTQ
Trigger: TTGGGTATGTGTTGATGTTCACAGACAGTACTTGGG...AACACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR GCA 90 bp CCTCCATGTGCATTTCTCTGTCCGTTTAGGTCAATGCCAACTGGTCCACCAGTGTATCTCCACTGCTGTTaGTCAAATCCATCAGAGAAT +
Preference number: 2 (lower is better)
Translates to: PPCAFLCPFRSMPTGPPVYLHCC*SNPSEN
Trigger: ATTCTCTGATGGATTTGAGCAACAGCAGTGGAGATA...CACTGGTGGACCAGTTGGCATTGACCTAAACGGACAGAGAAATGCACATGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR TCA 90 bp CACACAGACTACACAAGAGCACACAGAAGCTACGCATATTACAGCAACAGCGTTATCTATGCATTCCCTTaGTGGGTCGTGACTCTTAAC +
Preference number: 2 (lower is better)
Translates to: HTDYTRAHRSYAYYSNSVIYAFP*WVVTLN
Trigger: GTTAAGAGTCACGACCCATCAAGGGAATGCATAGAT...AACGCTGTTGCTGTAATATGCGTAGCTTCTGTGTGCTCTTGTGTAGTCTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR GCA 90 bp TCGTTGAGGTTTGACCTGATTTACACATCACACACTATATATCTCCATCTATGCGTCTGCTGTGAGATATaGTGCAGGGCCGCCCTAATC +
Preference number: 2 (lower is better)
Translates to: SLRFDLIYTSHTIYLHLCVCCEI*CRAALI
Trigger: GATTAGGGCGGCCCTGCAGCATATCTCACAGCAGAC...GCATAGATGGAGATATATAGTGTGTGATGTGTAAATCAGGTCAAACCTCAACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR GCA 90 bp TCGTTGAGGTTTGACCTGATTTACACATCACACACTATATATCTCCATCTATGCAGGTGTGAGCCACCGTaGCCGGCACAACCTTTCTTT +
Preference number: 2 (lower is better)
Translates to: SLRFDLIYTSHTIYLHLCRCEPP*PAQPFF
Trigger: AAAGAAAGGTTGTGCCGGGCACGGTGGCTCACACCT...GCATAGATGGAGATATATAGTGTGTGATGTGTAAATCAGGTCAAACCTCAACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR GCA 90 bp GAATACCCACTAATGTCTTGTAGCTGTTCTACGTACTCTCAGCTTTCTACTCCCCCTTATTTGCTTTCTTaGCAACCCGCTGATGAGGAG +
Preference number: 2 (lower is better)
Translates to: EYPLMSCSCSTYSQLSTPPYLLS*QPADEE
Trigger: CTCCTCATCAGCGGGTTGGCAAGAAAGCAAATAAGG...GGGAGTAGAAAGCTGAGAGTACGTAGAACAGCTACAAGACATTAGTGGGTATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR GCA 90 bp TCTACATGTGTCAGTCTGAGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTCAGGATGACAATGACTaGTGTAGCAGAGATGCATTA +
Preference number: 2 (lower is better)
Translates to: STCVSLSNVRSPLLKISFQDDND*CSRDAL
Trigger: TAATGCATCTCTGCTACAGCAGTCATTGTCATCCTG...AAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCTCAGACTGACACATGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR GCA 90 bp AGATCAGACCAACAGACAGTGATCTCCAGGCATCAGCTTCAGCTGCTACAAGCTGGCATTCACACATTCTaGCAGATATTCTCACTATTA +
Preference number: 2 (lower is better)
Translates to: RSDQQTVISRHQLQLLQAGIHTF*QIFSLL
Trigger: TAATAGTGAGAATATCTGGCAGAATGTGTGAATGCC...AGCTTGTAGCAGCTGAAGCTGATGCCTGGAGATCACTGTCTGTTGGTCTGATCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR CCA 90 bp AGATCAGACCAACAGACAGTGATCTCCAGGCATCAGCTTCAGCTGCTACAAGCTTCTTTTCCAAGACCATaGATAGTAAGCCTTTTGTTC +
Preference number: 2 (lower is better)
Translates to: RSDQQTVISRHQLQLLQASFPRP*IVSLLF
Trigger: GAACAAAAGGCTTACTATCCATGGTCTTGGAAAAGA...AGCTTGTAGCAGCTGAAGCTGATGCCTGGAGATCACTGTCTGTTGGTCTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR CCA 90 bp GGGAATAACCACTACTGCTCTCTTTGGTTCACAAGAGTCATCTATGCATTTCAAGTGTCTCGGTTTACTTaGCCACTCCTGGTGATAGTG +
Preference number: 2 (lower is better)
Translates to: GNNHYCSLWFTRVIYAFQVSRFT*PLLVIV
Trigger: CACTATCACCAGGAGTGGCCAAGTAAACCGAGACAC...TTGAAATGCATAGATGACTCTTGTGAACCAAAGAGAGCAGTAGTGGTTATTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR CCA 90 bp TTCCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGAATAGCTCTGGACAGTaGAATAAACATACCACACCA +
Preference number: 2 (lower is better)
Translates to: FPGNLGLSASICGHLVRVNSSGQ*NKHTTP
Trigger: TGGTGTGGTATGTTTATTCCACTGTCCAGAGCTATT...CACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR TCA 90 bp GAATACCCACTAATGTCTTGTAGCTGTTCTACGTACTCTCAGCTTTCTACTCCCTCAGGAGAAAGCTATTaGGACCAATATGCTTTGGTT +
Preference number: 2 (lower is better)
Translates to: EYPLMSCSCSTYSQLSTPSGESY*DQYALV
Trigger: AACCAAAGCATATTGGTCTCAATAGCTTTCTCCTGA...GGGAGTAGAAAGCTGAGAGTACGTAGAACAGCTACAAGACATTAGTGGGTATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CAA 90 bp AGGAAAGCTGCTCAGGAGATGACTGCGGGATATTTATTAGAATCCTaGAAAAACATCACGCCATCTTTCCAGAAGAAGAGAAGAGGTTTA +
Preference number: 2 (lower is better)
Translates to: RKAAQEMTAGYLLES*KNITPSFQKKRRGL
Trigger: TAAACCTCTTCTCTTCTTCTGGAAAGATGGCGTGATGTTTTTCAAGGATTCTAATAAATATCCCGCAGTCATCTCCTGAGCAGCTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR TCA 90 bp CAATTCAAATATCCACCATCTTCAGTTACCTTATCTGTTACACTGTCAAGTTGTAAAATTACATGGTCTTaGCCCAGAGAAAGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: QFKYPPSSVTLSVTLSSCKITWS*PRERGE
Trigger: CTCTCCTCTTTCTCTGGGTCAAGACCATGTAATTTT...ACAACTTGACAGTGTAACAGATAAGGTAACTGAAGATGGTGGATATTTGAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR GCA 72 bp GTGCCCGGCTGGGCCAACAGGGACAGCCATGGCTCTTaGGGTGCTGAGCAGGGCCATCCTGCCGTCACCACT +
Preference number: 3 (lower is better)
Translates to: VPGWANRDSHGS*GAEQGHPAVTT
Trigger: AGTGGTGACGGCAGGATGGCCCTGCTCAGCACCGCAAGAGCCATGGCTGTCCCTGTTGGCCCAGCCGGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR TCA 72 bp CTGGGCCAACAGGGACAGCCATGGCTCTTGCGGTGCTaGGCAGGGCCATCCTGCCGTCACCACTGTGGCCTA +
Preference number: 3 (lower is better)
Translates to: LGQQGQPWLLRC*AGPSCRHHCGL
Trigger: TAGGCCACAGTGGTGACGGCAGGATGGCCCTGCTCAGCACCGCAAGAGCCATGGCTGTCCCTGTTGGCCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 72 bp GCGGTGCTGAGCAGGGCCATCCTGCCGTCACCACTGTaGCCTAGGCAATGGGCTTCAGGGGTGTCCAGTCCA +
Preference number: 3 (lower is better)
Translates to: AVLSRAILPSPL*PRQWASGVSSP
Trigger: TGGACTGGACACCCCTGAAGCCCATTGCCTAGGCCACAGTGGTGACGGCAGGATGGCCCTGCTCAGCACCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR TCA 72 bp CTTATCCTCCCACTTGAGACCCACCCTTCTGCCCTGTaGGTGCCCGGCTGGGCCAACAGGGACAGCCATGGC +
Preference number: 3 (lower is better)
Translates to: LILPLETHPSAL*VPGWANRDSHG
Trigger: GCCATGGCTGTCCCTGTTGGCCCAGCCGGGCACTCACAGGGCAGAAGGGTGGGTCTCAAGTGGGAGGATAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR CAA 90 bp ACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTACCTGAAGATTTCCTTTaGCACGGCTGGCTCAGCACT +
Preference number: 3 (lower is better)
Translates to: TVVRPSQGPTLTTTLVYVPEDFL*HGWLST
Trigger: AGTGCTGAGCCAGCCGTGCAAAAGGAAATCTTCAGG...TACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
3UTR-3UTR CAA 90 bp AAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGATGAGGCTCACAAATTaGCGTAGGGTCACGACGAGC +
Preference number: 3 (lower is better)
Translates to: KRWSDLHRVPPSRRHWSTMRLTN*RRVTTS
Trigger: GCTCGTCGTGACCCTACGCAAATTTGTGAGCCTCAT...CGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR GCA 72 bp AGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTTaGACGGCTGGCTCAGCACTGCGGGTAGCTCGGCAT +
Preference number: 3 (lower is better)
Translates to: SNVRSPLLKISF*TAGSALRVARH
Trigger: ATGCCGAGCTACCCGCAGTGCTGAGCCAGCCGTGCAAAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
3UTR CCA 72 bp ACTGCGGGTAGCTCGGCATTAACAAAAGCGAAACGGTaGTCAGACCTTCACAGGGTCCCACCCTCACGACGA +
Preference number: 3 (lower is better)
Translates to: TAGSSALTKAKR*SDLHRVPPSRR
Trigger: TCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGTTAATGCCGAGCTACCCGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
3UTR CCA 72 bp AGTCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTTaGCCACTCCTGGTGATAGTGGTGCCTGCAGCGTCT +
Preference number: 3 (lower is better)
Translates to: SPALLLLVSRFT*PLLVIVVPAAS
Trigger: AGACGCTGCAGGCACCACTATCACCAGGAGTGGCCAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 72 bp TCAGACCTTCACAGGGTCCCACCCTCACGACGACACTaGTCTACGTACTCCAGACAGGCCTCAGTTCTTCTT +
Preference number: 3 (lower is better)
Translates to: SDLHRVPPSRRH*STYSRQASVLL
Trigger: AAGAAGAACTGAGGCCTGTCTGGAGTACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR-3UTR CAA 90 bp ACGACGAGCGTGACGGTGAGGGAGGCGCATTCTGTGGTGAGGATAAACACACCCGGAATATCCCCATCCTaGCTGACATCAGAAGAGCAA +
Preference number: 3 (lower is better)
Translates to: TTSVTVREAHSVVRINTPGISPS*LTSEEQ
Trigger: TTGCTCTTCTGATGTCAGCAAGGATGGGGATATTCC...GGGTGTGTTTATCCTCACCACAGAATGCGCCTCCCTCACCGTCACGCTCGTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR GCA 72 bp TCTTTCCTTCCCAAAACGCTGGAGGAAGTCCAGCCCTaGTGTTACTGGTGTCTCGGTTTACTTGGCCACTCC +
Preference number: 3 (lower is better)
Translates to: SFLPKTLEEVQP*CYWCLGLLGHS
Trigger: GGAGTGGCCAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGACTTCCTCCAGCGTTTTGGGAAGGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR GCA 72 bp AAGGTCCCAATGAAGACAAACAAGGTGCCCAGCCAGTaGCACAGGGTGAAGGGGTTCTGGAAGTACAAGATG +
Preference number: 3 (lower is better)
Translates to: KVPMKTNKVPSQ*HRVKGFWKYKM
Trigger: CATCTTGTACTTCCAGAACCCCTTCACCCTGTGGCACTGGCTGGGCACCTTGTTTGTCTTCATTGGGACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR CCA 72 bp GAAAGAGGAGTCCCACTAGTCTTGCTGCACTGTCACTaGGAATCAGCTCAGGGGAACATCTCTTTCCTTCCC +
Preference number: 3 (lower is better)
Translates to: ERGVPLVLLHCH*ESAQGNISFLP
Trigger: GGGAAGGAAAGAGATGTTCCCCTGAGCTGATTCCCAGTGACAGTGCAGCAAGACTAGTGGGACTCCTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR CAA 90 bp GGTTTACTCTGGGTGGCACAGACCAATTCAGCTTTCATGGTCTTCCTCCGTAGCCCACTTCCGTGCCCTTaGATCACACACAGACTACAC +
Preference number: 3 (lower is better)
Translates to: GLLWVAQTNSAFMVFLRSPLPCP*ITHRLH
Trigger: GTGTAGTCTGTGTGTGATCAAAGGGCACGGAAGTGG...GCTACGGAGGAAGACCATGAAAGCTGAATTGGTCTGTGCCACCCAGAGTAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR CAA 90 bp AGATCAGACCAACAGACAGTGATCTCCAGGCATCAGCTTCAGCTGCTACAAGCTGGTGTCTCGGTTTACTaGGCCACTCCTGGTGATAGT +
Preference number: 3 (lower is better)
Translates to: RSDQQTVISRHQLQLLQAGVSVY*ATPGDS
Trigger: ACTATCACCAGGAGTGGCCAAGTAAACCGAGACACC...AGCTTGTAGCAGCTGAAGCTGATGCCTGGAGATCACTGTCTGTTGGTCTGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 72 bp AATAGCTCTGGACAGTGGAATAAACATACCACACCATaGAATGAGCCCAGGAGACCTGCAGAGCCACGTCTC +
Preference number: 3 (lower is better)
Translates to: NSSGQWNKHTTP*NEPRRPAEPRL
Trigger: GAGACGTGGCTCTGCAGGTCTCCTGGGCTCATTCCATGGTGTGGTATGTTTATTCCACTGTCCAGAGCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 72 bp CCTTATTTGCTTTCTTGCCAACCCGCTGATGAGGAGTaGGAACAGGTATCACGAACCCTCAGGTTTTCCAGA +
Preference number: 3 (lower is better)
Translates to: PYLLSCQPADEE*EQVSRTLRFSR
Trigger: TCTGGAAAACCTGAGGGTTCGTGATACCTGTTCCCACTCCTCATCAGCGGGTTGGCAAGAAAGCAAATAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR TCA 72 bp CAGTCTTTGTCTATAGGCAAACAGAGAAGTGGCCGGTaGGTTCAGCTGCTTACAGAGGAGCATGTACTGGTA +
Preference number: 3 (lower is better)
Translates to: QSLSIGKQRSGR*VQLLTEEHVLV
Trigger: TACCAGTACATGCTCCTCTGTAAGCAGCTGAACTCACCGGCCACTTCTCTGTTTGCCTATAGACAAAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 72 bp ACACACACAGTCTTTGTCTATAGGCAAACAGAGAAGTaGCCGGTGAGTTCAGCTGCTTACAGAGGAGCATGT +
Preference number: 3 (lower is better)
Translates to: THTVFVYRQTEK*PVSSAAYRGAC
Trigger: ACATGCTCCTCTGTAAGCAGCTGAACTCACCGGCCACTTCTCTGTTTGCCTATAGACAAAGACTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 72 bp TTTAAAGCCAAGAGGGGCCAGTCTCCCATTCCAGCTTaGTACACACTGAACACATTTGAGGCTTATGACTGG +
Preference number: 3 (lower is better)
Translates to: FKAKRGQSPIPA*YTLNTFEAYDW
Trigger: CCAGTCATAAGCCTCAAATGTGTTCAGTGTGTACCAAGCTGGAATGGGAGACTGGCCCCTCTTGGCTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR CAA 90 bp CCTCCATGTGCATTTCTCTGTCCGTTTAGGTCAATGCCAACTGGTCCACCAGTGACACACACACAGTCTTaGTCTATAGGCAAACAGAGA +
Preference number: 3 (lower is better)
Translates to: PPCAFLCPFRSMPTGPPVTHTQS*SIGKQR
Trigger: TCTCTGTTTGCCTATAGACAAAGACTGTGTGTGTGT...CACTGGTGGACCAGTTGGCATTGACCTAAACGGACAGAGAAATGCACATGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR CAA 90 bp GAATACCCACTAATGTCTTGTAGCTGTTCTACGTACTCTCAGCTTTCTACTCCCGTATCTCTGGCTCCCTaGCAACTTGCCTCACTTGAT +
Preference number: 3 (lower is better)
Translates to: EYPLMSCSCSTYSQLSTPVSLAP*QLASLD
Trigger: ATCAAGTGAGGCAAGTTGCAAGGGAGCCAGAGATAC...GGGAGTAGAAAGCTGAGAGTACGTAGAACAGCTACAAGACATTAGTGGGTATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR TCA 72 bp AGAGGGGCCAGTCTCCCATTCCAGCTTGGTACACACTaGACACATTTGAGGCTTATGACTGGTTCTTTTACT +
Preference number: 3 (lower is better)
Translates to: RGASLPFQLGTH*THLRLMTGSFT
Trigger: AGTAAAAGAACCAGTCATAAGCCTCAAATGTGTTCAGTGTGTACCAAGCTGGAATGGGAGACTGGCCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 72 bp GCCGGTGAGTTCAGCTGCTTACAGAGGAGCATGTACTaGTATGTAAGGTTCCAGCTAAGTAAAGAAAAGGGA +
Preference number: 3 (lower is better)
Translates to: AGEFSCLQRSMY*YVRFQLSKEKG
Trigger: TCCCTTTTCTTTACTTAGCTGGAACCTTACATACCAGTACATGCTCCTCTGTAAGCAGCTGAACTCACCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 72 bp CATCTTTCCAGAAGAAGAGAAGAGGTTTACTCTGGGTaGCACAGACCAATTCAGCTTTCATGGTCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: HLSRRREEVYSG*HRPIQLSWSSS
Trigger: GGAGGAAGACCATGAAAGCTGAATTGGTCTGTGCCACCCAGAGTAAACCTCTTCTCTTCTTCTGGAAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 72 bp ACGCCATCTTTCCAGAAGAAGAGAAGAGGTTTACTCTaGGTGGCACAGACCAATTCAGCTTTCATGGTCTTC +
Preference number: 3 (lower is better)
Translates to: TPSFQKKRRGLL*VAQTNSAFMVF
Trigger: GAAGACCATGAAAGCTGAATTGGTCTGTGCCACCCAGAGTAAACCTCTTCTCTTCTTCTGGAAAGATGGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR TCA 72 bp TATATATCTCCATCTATGCATTCCCTTGATGGGTCGTaGCTCTTAACAGAGTCATCGGGCAGAGGGGAATCT +
Preference number: 3 (lower is better)
Translates to: YISPSMHSLDGS*LLTESSGRGES
Trigger: AGATTCCCCTCTGCCCGATGACTCTGTTAAGAGTCACGACCCATCAAGGGAATGCATAGATGGAGATATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR TCA 72 bp CATCACACACTATATATCTCCATCTATGCATTCCCTTaGTGGGTCGTGACTCTTAACAGAGTCATCGGGCAG +
Preference number: 3 (lower is better)
Translates to: HHTLYISIYAFP*WVVTLNRVIGQ
Trigger: CTGCCCGATGACTCTGTTAAGAGTCACGACCCATCAAGGGAATGCATAGATGGAGATATATAGTGTGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR GCA 72 bp TTTCTTTGTTATGAACACTGTGTCTGCTGTGAGATATaGTGCAGGGCCGCCCTAATCACAGAAAGCAATGGA +
Preference number: 3 (lower is better)
Translates to: FLCYEHCVCCEI*CRAALITESNG
Trigger: TCCATTGCTTTCTGTGATTAGGGCGGCCCTGCAGCATATCTCACAGCAGACACAGTGTTCATAACAAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 72 bp GTTTACTCTGGGTGGCACAGACCAATTCAGCTTTCATaGTCTTCCTCCGTAGCACTGACCAAATCAAAATAC +
Preference number: 3 (lower is better)
Translates to: VYSGWHRPIQLS*SSSVALTKSKY
Trigger: GTATTTTGATTTGGTCAGTGCTACGGAGGAAGACCATGAAAGCTGAATTGGTCTGTGCCACCCAGAGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 72 bp TTGGAGAATGAGGCCATTCTCTGGAATGAAAGCAACTaGCACAGAAATGACTGGCAATCGCAAGTGATACAC +
Preference number: 3 (lower is better)
Translates to: LENEAILWNESN*HRNDWQSQVIH
Trigger: GTGTATCACTTGCGATTGCCAGTCATTTCTGTGCCAGTTGCTTTCATTCCAGAGAATGGCCTCATTCTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR CAA 90 bp CCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGTTTCCTCCTATTCAAGATaGTCCAGTGAAAGGAAAACT +
Preference number: 3 (lower is better)
Translates to: PREFGAFCFYMWSSCASVSSYSR*SSERKT
Trigger: AGTTTTCCTTTCACTGGACAATCTTGAATAGGAGGA...AACACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR TCA 72 bp AAAGCAACTGGCACAGAAATGACTGGCAATCGCAAGTaGTACACAAAGGCATTTTTATTGCGCCGGGGAATA +
Preference number: 3 (lower is better)
Translates to: KATGTEMTGNRK*YTKAFLLRRGI
Trigger: TATTCCCCGGCGCAATAAAAATGCCTTTGTGTATCACTTGCGATTGCCAGTCATTTCTGTGCCAGTTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR TCA 72 bp TCACGTATCTCTGGCTCCCTTGCAACTTGCCTCACTTaGTTAAAATTGACAAATTTTGGTAGGACGGTTACC +
Preference number: 3 (lower is better)
Translates to: SRISGSLATCLT*LKLTNFGRTVT
Trigger: GGTAACCGTCCTACCAAAATTTGTCAATTTTAATCAAGTGAGGCAAGTTGCAAGGGAGCCAGAGATACGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 72 bp GAAGTGGAAGGGCGTGATTATAAAACAAAGCCTCCTTaGAGTGTTTCCCAAATCGTTTGTAGAGAGTCTCTT +
Preference number: 3 (lower is better)
Translates to: EVEGRDYKTKPP*SVSQIVCRESL
Trigger: AAGAGACTCTCTACAAACGATTTGGGAAACACTCCAAGGAGGCTTTGTTTTATAATCACGCCCTTCCACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
3UTR GCA 72 bp ATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTaGGAGTGTTCTAATCTAATCTATTCCCTGCCCATA +
Preference number: 3 (lower is better)
Translates to: IWGFLLLYVVIL*ECSNLIYSLPI
Trigger: TATGGGCAGGGAATAGATTAGATTAGAACACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR GCA 72 bp AAAGGCATTTTTATTGCGCCGGGGAATAACCACTACTaGTCTCTTTGGTTCACAAGAGTCATCTATGCATTT +
Preference number: 3 (lower is better)
Translates to: KGIFIAPGNNHY*SLWFTRVIYAF
Trigger: AAATGCATAGATGACTCTTGTGAACCAAAGAGAGCAGTAGTGGTTATTCCCCGGCGCAATAAAAATGCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR-3UTR CAA 90 bp GGGAATAACCACTACTGCTCTCTTTGGTTCACAAGAGTCATCTATGCATTTCAACTATATGTGGTCATCTaGTGCGAGTGTTCTAATCTA +
Preference number: 3 (lower is better)
Translates to: GNNHYCSLWFTRVIYAFQLYVVI*CECSNL
Trigger: TAGATTAGAACACTCGCACAAGATGACCACATATAG...TTGAAATGCATAGATGACTCTTGTGAACCAAAGAGAGCAGTAGTGGTTATTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 72 bp TTTATTGCGCCGGGGAATAACCACTACTGCTCTCTTTaGTTCACAAGAGTCATCTATGCATTTCAAAAGATA +
Preference number: 3 (lower is better)
Translates to: FIAPGNNHYCSL*FTRVIYAFQKI
Trigger: TATCTTTTGAAATGCATAGATGACTCTTGTGAACCAAAGAGAGCAGTAGTGGTTATTCCCCGGCGCAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CCA 72 bp ATTCTCTGGAATGAAAGCAACTGGCACAGAAATGACTaGCAATCGCAAGTGATACACAAAGGCATTTTTATT +
Preference number: 3 (lower is better)
Translates to: ILWNESNWHRND*QSQVIHKGIFI
Trigger: AATAAAAATGCCTTTGTGTATCACTTGCGATTGCCAGTCATTTCTGTGCCAGTTGCTTTCATTCCAGAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp GCTCTTGCGGTGCTGAGCAGGGCCATCCTGCCGTCACCACTGTGGCCTAGGCAAAGGAAGCCGGCCTCCTaGCTCTTCGCTGCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ALAVLSRAILPSPLWPRQRKPAS*LFAAQH
Trigger: GTGCTGCGCAGCGAAGAGGCAGGAGGCCGGCTTCCT...TTGCCTAGGCCACAGTGGTGACGGCAGGATGGCCCTGCTCAGCACCGCAAGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp GCTCTTGCGGTGCTGAGCAGGGCCATCCTGCCGTCACCACTGTGGCCTAGGCAACTCCTGCCTCTTCGCTaGGCAGCACATCGCACCGTC +
Preference number: 4 (lower is better)
Translates to: ALAVLSRAILPSPLWPRQLLPLR*AAHRTV
Trigger: GACGGTGCGATGTGCTGCGCAGCGAAGAGGCAGGAG...TTGCCTAGGCCACAGTGGTGACGGCAGGATGGCCCTGCTCAGCACCGCAAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp CGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACACCCTTCTGCCCTGTaGGTGCCCGGCTGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: RNGGQTFTGSHPHDDTGLHPSAL*VPGWAN
Trigger: GTTGGCCCAGCCGGGCACTCACAGGGCAGAAGGGTG...TAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp GACGAGCGTGACGGTGAGGGAGGCGCATTCTGTGGTGAGGATAAACACACCCCGAGGAAGCCGGCCTCCTaGCTCTTCGCTGCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: DERDGEGGAFCGEDKHTPRKPAS*LFAAQH
Trigger: GTGCTGCGCAGCGAAGAGGCAGGAGGCCGGCTTCCT...CGGGGTGTGTTTATCCTCACCACAGAATGCGCCTCCCTCACCGTCACGCTCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR GCA 90 bp GGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTACTCCACTCCTGCCTCTTCGCTaGGCAGCACATCGCACCGTC +
Preference number: 4 (lower is better)
Translates to: GQTFTGSHPHDDTGLRTPLLPLR*AAHRTV
Trigger: GACGGTGCGATGTGCTGCGCAGCGAAGAGGCAGGAG...TGGAGTACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR GCA 90 bp GCTCTTGCGGTGCTGAGCAGGGCCATCCTGCCGTCACCACTGTGGCCTAGGCAAGTCTGCTGTGAGATATaGTGCAGGGCCGCCCTAATC +
Preference number: 4 (lower is better)
Translates to: ALAVLSRAILPSPLWPRQVCCEI*CRAALI
Trigger: GATTAGGGCGGCCCTGCAGCATATCTCACAGCAGAC...TTGCCTAGGCCACAGTGGTGACGGCAGGATGGCCCTGCTCAGCACCGCAAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp AACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTTGGCCGGTGCAGGGTTaGGGAAGCAAGCGCACAGAG +
Preference number: 4 (lower is better)
Translates to: NGGQTFTGSHPHDDTGLRWPVQG*GSKRTE
Trigger: CTCTGTGCGCTTGCTTCCCCAACCCTGCACCGGCCA...ACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR TCA 90 bp CTCGGCATTAACAAAAGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCTGGCTCTTGCGGTGCTaGGCAGGGCCATCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: LGINKSETVVRPSQGPTLWLLRC*AGPSCR
Trigger: ACGGCAGGATGGCCCTGCTCAGCACCGCAAGAGCCA...GAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGTTAATGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp AGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCCCTTATCCTCCCACTTaGGACCCACCCTTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SETVVRPSQGPTLTTTLVPYPPT*DPPFCP
Trigger: AGGGCAGAAGGGTGGGTCTCAAGTGGGAGGATAAGG...GACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp GGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTACTCCACAACTGGTCCACCAGTaGACATGTCCACCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GQTFTGSHPHDDTGLRTPQLVHQ*TCPPAL
Trigger: CAGGGCCGGTGGACATGTTCACTGGTGGACCAGTTG...TGGAGTACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp GGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTACTCCAAAGGTGCCCAGCCAGTaGCACAGGGTGAAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: GQTFTGSHPHDDTGLRTPKVPSQ*HRVKGF
Trigger: GAACCCCTTCACCCTGTGGCACTGGCTGGGCACCTT...TGGAGTACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CCA 90 bp AGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTTCCTTTTGCACGGCTaGCTCAGCACTGCGGGTAGC +
Preference number: 4 (lower is better)
Translates to: SETVVRPSQGPTLTTTLVFLLHG*LSTAGS
Trigger: GCTACCCGCAGTGCTGAGCCAGCCGTGCAAAAGGAA...GACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR TCA 90 bp ACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTAGGAGGTAGAACCACATaGTGGGCAGGGTCACTCCGA +
Preference number: 4 (lower is better)
Translates to: TVVRPSQGPTLTTTLVYVGGRTT*WAGSLR
Trigger: TCGGAGTGACCCTGCCCATCATGTGGTTCTACCTCC...TACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CCA 90 bp GAGTCATCGGGCAGAGGGGAATCTCCTGGTGGTGAAGCCTTATCCTCCCACTTGCACATCGCACCGTCCTaGAAAGCCGCTCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: ESSGRGESPGGEALSSHLHIAPS*KAALTG
Trigger: CCCAGTGAGAGCGGCTTTCCAGGACGGTGCGATGTG...CAAGTGGGAGGATAAGGCTTCACCACCAGGAGATTCCCCTCTGCCCGATGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp AGATCAGACCAACAGACAGTGATCTCCAGGCATCAGCTTCAGCTGCTACAAGCTCCAAGGCCGGGCGCATaGCCGGTGCAGGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RSDQQTVISRHQLQLLQAPRPGA*PVQGWG
Trigger: TCCCCAACCCTGCACCGGCCATGCGCCCGGCCTTGG...AGCTTGTAGCAGCTGAAGCTGATGCCTGGAGATCACTGTCTGTTGGTCTGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp GGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTACTCCACAGAGAAGTGGCCGGTaGGTTCAGCTGCTTACAGAG +
Preference number: 4 (lower is better)
Translates to: GQTFTGSHPHDDTGLRTPQRSGR*VQLLTE
Trigger: CTCTGTAAGCAGCTGAACTCACCGGCCACTTCTCTG...TGGAGTACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp AGTTCTCCTCCATGTGCATTTCTCTGTCCGTTTAGGTCAATGCCAACTGGTCCAGAAAGCCGCTCTCACTaGGGGCCGCCGCGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: SSPPCAFLCPFRSMPTGPESRSH*GPPRSP
Trigger: GGGAGACCGCGGCGGCCCCCAGTGAGAGCGGCTTTC...TGGACCAGTTGGCATTGACCTAAACGGACAGAGAAATGCACATGGAGGAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp AGCCAAGAAGACGAAACCCGGAAGTGGAAGGGCGTGATTATAAAACAAAGCCTCGAAAGCCGCTCTCACTaGGGGCCGCCGCGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: SQEDETRKWKGVIIKQSLESRSH*GPPRSP
Trigger: GGGAGACCGCGGCGGCCCCCAGTGAGAGCGGCTTTC...GAGGCTTTGTTTTATAATCACGCCCTTCCACTTCCGGGTTTCGTCTTCTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR CCA 90 bp AGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTTGCTGCACTGTCACTaGGAATCAGCTCAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: SETVVRPSQGPTLTTTLVLLHCH*ESAQGN
Trigger: GTTCCCCTGAGCTGATTCCCAGTGACAGTGCAGCAA...GACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CAA 72 bp GAGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTaGCACGGCTGGCTCAGCACTGCGGGTAGCTCGGCA +
Preference number: 4 (lower is better)
Translates to: EQREKSPPEDFL*HGWLSTAGSSA
Trigger: TGCCGAGCTACCCGCAGTGCTGAGCCAGCCGTGCAAAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR TCA 90 bp GCTCTTGCGGTGCTGAGCAGGGCCATCCTGCCGTCACCACTGTGGCCTAGGCAATATCCCCATCCTTGCTaGCATCAGAAGAGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: ALAVLSRAILPSPLWPRQYPHPC*HQKSKS
Trigger: ACTTTTGCTCTTCTGATGTCAGCAAGGATGGGGATA...TTGCCTAGGCCACAGTGGTGACGGCAGGATGGCCCTGCTCAGCACCGCAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp CTCGGCATTAACAAAAGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACACTGTGTCTGCTGTaGGATATGCTGCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LGINKSETVVRPSQGPTLTLCLL*DMLQGR
Trigger: GCGGCCCTGCAGCATATCTCACAGCAGACACAGTGT...GAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGTTAATGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp CGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTAGGAATCTCCTGGTGGTaGAGCCTTATCCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: RNGGQTFTGSHPHDDTGLGISWW*SLILPL
Trigger: AAGTGGGAGGATAAGGCTTCACCACCAGGAGATTCC...TAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp GAGTCATCGGGCAGAGGGGAATCTCCTGGTGGTGAAGCCTTATCCTCCCACTTGTACCACACCATGGAATaGGCCCAGGAGACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ESSGRGESPGGEALSSHLYHTME*AQETCR
Trigger: TCTGCAGGTCTCCTGGGCTCATTCCATGGTGTGGTA...CAAGTGGGAGGATAAGGCTTCACCACCAGGAGATTCCCCTCTGCCCGATGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp AACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTCAGACCAACAGACAGTaGTCTCCAGGCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NGGQTFTGSHPHDDTGLRQTNRQ*SPGISF
Trigger: GAAGCTGATGCCTGGAGATCACTGTCTGTTGGTCTG...ACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp GGTTTACTCTGGGTGGCACAGACCAATTCAGCTTTCATGGTCTTCCTCCGTAGCGTTACTGCAGCAGCCTaGGAACACCAGGCCCACCGC +
Preference number: 4 (lower is better)
Translates to: GLLWVAQTNSAFMVFLRSVTAAA*EHQAHR
Trigger: GCGGTGGGCCTGGTGTTCGCAGGCTGCTGCAGTAAC...GCTACGGAGGAAGACCATGAAAGCTGAATTGGTCTGTGCCACCCAGAGTAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp CGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTAGGAAGATCACGTTACTaGAGCAGCCTGCGAACACCA +
Preference number: 4 (lower is better)
Translates to: RNGGQTFTGSHPHDDTGLGRSRY*SSLRTP
Trigger: TGGTGTTCGCAGGCTGCTGCAGTAACGTGATCTTCC...TAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR GCA 90 bp AACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTGGAAGATCACGTTACTaGAGCAGCCTGCGAACACCA +
Preference number: 4 (lower is better)
Translates to: NGGQTFTGSHPHDDTGLRGRSRY*SSLRTP
Trigger: TGGTGTTCGCAGGCTGCTGCAGTAACGTGATCTTCC...ACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR GCA 90 bp AAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTGCTGTGAGATATGCTaGAGGGCCGCCCTAATCACA +
Preference number: 4 (lower is better)
Translates to: KRWSDLHRVPPSRRHWSTCCEIC*RAALIT
Trigger: TGTGATTAGGGCGGCCCTGCAGCATATCTCACAGCA...CGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp AAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGGAAACAGAGGAAAGCTaGTCAGGAGATGACTGCGGG +
Preference number: 4 (lower is better)
Translates to: KRWSDLHRVPPSRRHWSTETEES*SGDDCG
Trigger: CCCGCAGTCATCTCCTGAGCAGCTTTCCTCTGTTTC...CGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp CCTCCTTGGAGTGTTTCCCAAATCGTTTGTAGAGAGTCTCTTGGAATATCCCCACCAAGGCCGGGCGCATaGCCGGTGCAGGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PPWSVSQIVCRESLGISPPRPGA*PVQGWG
Trigger: TCCCCAACCCTGCACCGGCCATGCGCCCGGCCTTGG...TGGGGATATTCCAAGAGACTCTCTACAAACGATTTGGGAAACACTCCAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR CCA 90 bp AAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGCAGCCCTGCTGTTACTaGTGTCTCGGTTTACTTGGC +
Preference number: 4 (lower is better)
Translates to: KRWSDLHRVPPSRRHWSTQPCCY*CLGLLG
Trigger: GCCAAGTAAACCGAGACACCAGTAACAGCAGGGCTG...CGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp AAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGAGGCAAACAGAGAAGTaGCCGGTGAGTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KRWSDLHRVPPSRRHWSTRQTEK*PVSSAA
Trigger: AGCAGCTGAACTCACCGGCCACTTCTCTGTTTGCCT...CGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CAA 72 bp AAGTCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTaGGCCACTCCTGGTGATAGTGGTGCCTGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: KSSPAVTGVSVY*ATPGDSGACSV
Trigger: GACGCTGCAGGCACCACTATCACCAGGAGTGGCCAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp GGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTACTCCATCACCACGCTCACGGTaGAGAACATGGTCACCATTA +
Preference number: 4 (lower is better)
Translates to: GQTFTGSHPHDDTGLRTPSPRSR*RTWSPL
Trigger: TAATGGTGACCATGTTCTTCACCGTGAGCGTGGTGA...TGGAGTACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR TCA 90 bp AGGCTCACAAATTTGCGTAGGGTCACGACGAGCGTGACGGTGAGGGAGGCGCATGGGGCATGGCAATGTTaGGATTCAGGGCATAGTTGT +
Preference number: 4 (lower is better)
Translates to: RLTNLRRVTTSVTVREAHGAWQC*DSGHSC
Trigger: ACAACTATGCCCTGAATCTCAACATTGCCATGCCCC...ATGCGCCTCCCTCACCGTCACGCTCGTCGTGACCCTACGCAAATTTGTGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR TCA 90 bp GCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTGCAGGGTCACTCCGATaGCGGGAATTTCATATAACT +
Preference number: 4 (lower is better)
Translates to: AKRWSDLHRVPPSRRHWSAGSLR*REFHIT
Trigger: AGTTATATGAAATTCCCGTCATCGGAGTGACCCTGC...AGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR TCA 90 bp AGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCGCAGGGTCACTCCGATaGCGGGAATTTCATATAACT +
Preference number: 4 (lower is better)
Translates to: SETVVRPSQGPTLTTTLVAGSLR*REFHIT
Trigger: AGTTATATGAAATTCCCGTCATCGGAGTGACCCTGC...GACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR TCA 90 bp AGGCTCACAAATTTGCGTAGGGTCACGACGAGCGTGACGGTGAGGGAGGCGCATCGGATGCACACGTACTaGGTGATGATGTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: RLTNLRRVTTSVTVREAHRMHTY*VMMFMR
Trigger: CCTCATGAACATCATCACTCAGTACGTGTGCATCCG...ATGCGCCTCCCTCACCGTCACGCTCGTCGTGACCCTACGCAAATTTGTGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR TCA 90 bp AGATCAGACCAACAGACAGTGATCTCCAGGCATCAGCTTCAGCTGCTACAAGCTGGTGCCTGCAGCGTCTaGCTGACTGTGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RSDQQTVISRHQLQLLQAGACSV*LTVRCC
Trigger: GCAGCACCTCACAGTCAGTCAGACGCTGCAGGCACC...AGCTTGTAGCAGCTGAAGCTGATGCCTGGAGATCACTGTCTGTTGGTCTGATCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp AACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTGGTATCTGGCACTGTTaGGTGAAGCCAGTTAATGGG +
Preference number: 4 (lower is better)
Translates to: NGGQTFTGSHPHDDTGLRGIWHC*VKPVNG
Trigger: CCCATTAACTGGCTTCACTCAACAGTGCCAGATACC...ACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp TTCCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGCTTCTGCCCTGTGAGTaGCCGGCTGGGCCAACAGGG +
Preference number: 4 (lower is better)
Translates to: FPGNLGLSASICGHLVRVLLPCE*PAGPTG
Trigger: CCCTGTTGGCCCAGCCGGGCACTCACAGGGCAGAAG...CACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp AAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGCATTCTCACTCAAGCTaGACTGGGAAGTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: KRWSDLHRVPPSRRHWSTHSHSS*TGKSPA
Trigger: AGCAGGTGACTTCCCAGTCCAGCTTGAGTGAGAATG...CGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CCA 90 bp TCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTTGGCCACTCCTGGTGATAGTCTGTGGCCTAGGCAATaGGCTTCAGGGGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SSPAVTGVSVYLATPGDSLWPRQ*ASGVSS
Trigger: ACTGGACACCCCTGAAGCCCATTGCCTAGGCCACAG...ACTATCACCAGGAGTGGCCAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp ACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTATTCTTGCTGTCCTTCTaGGGCTCACTTTTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: TVVRPSQGPTLTTTLVYVFLLSF*GSLFVV
Trigger: GACCACAAAAAGTGAGCCTCAGAAGGACAGCAAGAA...TACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR TCA 90 bp AGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCATCTATGCATTCCCTTaGTGGGTCGTGACTCTTAAC +
Preference number: 4 (lower is better)
Translates to: SETVVRPSQGPTLTTTLVIYAFP*WVVTLN
Trigger: GTTAAGAGTCACGACCCATCAAGGGAATGCATAGAT...GACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp GAGTCATCGGGCAGAGGGGAATCTCCTGGTGGTGAAGCCTTATCCTCCCACTTGCATGTCCACCGGCCCTaGGCTAACTCATTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: ESSGRGESPGGEALSSHLHVHRP*ANSLVY
Trigger: ATAAACCAATGAGTTAGCTCAGGGCCGGTGGACATG...CAAGTGGGAGGATAAGGCTTCACCACCAGGAGATTCCCCTCTGCCCGATGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp GGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTACTCCACTGGCGATACAGAAATaGGTAAGACATGATCCCTGG +
Preference number: 4 (lower is better)
Translates to: GQTFTGSHPHDDTGLRTPLAIQK*VRHDPW
Trigger: CCAGGGATCATGTCTTACTCATTTCTGTATCGCCAG...TGGAGTACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp GCCGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCCTCAGAAACTGTCAGGTACTCCTGCCTCTTCGCTaGGCAGCACATCGCACCGTC +
Preference number: 4 (lower is better)
Translates to: AEVKSRVKLRLCLRNCQVLLPLR*AAHRTV
Trigger: GACGGTGCGATGTGCTGCGCAGCGAAGAGGCAGGAG...TACCTGACAGTTTCTGAGGCAGAGTCTCAGTTTTACTCTTGACTTGACCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR GCA 90 bp TCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTTGGCCACTCCTGGTGATAGTAGGTGTGAGCCACCGTaGCCGGCACAACCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SSPAVTGVSVYLATPGDSRCEPP*PAQPFF
Trigger: AAAGAAAGGTTGTGCCGGGCACGGTGGCTCACACCT...ACTATCACCAGGAGTGGCCAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp GCTCTTGCGGTGCTGAGCAGGGCCATCCTGCCGTCACCACTGTGGCCTAGGCAATATCTCCACTGCTGTTaGTCAAATCCATCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: ALAVLSRAILPSPLWPRQYLHCC*SNPSEN
Trigger: ATTCTCTGATGGATTTGAGCAACAGCAGTGGAGATA...TTGCCTAGGCCACAGTGGTGACGGCAGGATGGCCCTGCTCAGCACCGCAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp AGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCATGTTTCCCCTTATTTaGTTTCTTGCCAACCCGCTG +
Preference number: 4 (lower is better)
Translates to: SETVVRPSQGPTLTTTLVMFPLI*FLANPL
Trigger: CAGCGGGTTGGCAAGAAAGCAAATAAGGGGAAACAT...GACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp AAAGCTTTTGCTGCTGCAATGACTGGAAAGTGGAATGGAGACATTTTCGAAAGGCCAAGGCCGGGCGCATaGCCGGTGCAGGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: KAFAAAMTGKWNGDIFERPRPGA*PVQGWG
Trigger: TCCCCAACCCTGCACCGGCCATGCGCCCGGCCTTGG...CCTTTCGAAAATGTCTCCATTCCACTTTCCAGTCATTGCAGCAGCAAAAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CCA 90 bp AAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGCCTTATTGGGATAGCTaGTGGCTTCCTTCCCAAATC +
Preference number: 4 (lower is better)
Translates to: KRWSDLHRVPPSRRHWSTPYWDS*WLPSQI
Trigger: GATTTGGGAAGGAAGCCACCAGCTATCCCAATAAGG...CGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CCA 90 bp ACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTAGAGGCTCACTTTTTGTaGTCCCTAGGTTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: TVVRPSQGPTLTTTLVYVEAHFL*SLGCST
Trigger: TGTGGAACAACCTAGGGACCACAAAAAGTGAGCCTC...TACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CCA 90 bp GCCGGTGAGTTCAGCTGCTTACAGAGGAGCATGTACTGGTATGTAAGGTTCCAGTTCCTTTTGCACGGCTaGCTCAGCACTGCGGGTAGC +
Preference number: 4 (lower is better)
Translates to: AGEFSCLQRSMYWYVRFQFLLHG*LSTAGS
Trigger: GCTACCCGCAGTGCTGAGCCAGCCGTGCAAAAGGAA...CTGGAACCTTACATACCAGTACATGCTCCTCTGTAAGCAGCTGAACTCACCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp AGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCCAGAGGAGCATGTACTaGTATGTAAGGTTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: SETVVRPSQGPTLTTTLVQRSMY*YVRFQL
Trigger: TAGCTGGAACCTTACATACCAGTACATGCTCCTCTG...GACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp CGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACCAATTCAGCTTTCATaGTCTTCCTCCGTAGCACTG +
Preference number: 4 (lower is better)
Translates to: RNGGQTFTGSHPHDDTGLPIQLS*SSSVAL
Trigger: CAGTGCTACGGAGGAAGACCATGAAAGCTGAATTGG...TAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp ACGACGAGCGTGACGGTGAGGGAGGCGCATTCTGTGGTGAGGATAAACACACCCTATCCCCATCCTTGCTaGCATCAGAAGAGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: TTSVTVREAHSVVRINTPYPHPC*HQKSKS
Trigger: ACTTTTGCTCTTCTGATGTCAGCAAGGATGGGGATA...GGGTGTGTTTATCCTCACCACAGAATGCGCCTCCCTCACCGTCACGCTCGTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR TCA 90 bp GGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTACTCCAACATTAAGGTCCCAATaGAGACAAACAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GQTFTGSHPHDDTGLRTPTLRSQ*RQTRCP
Trigger: TGGGCACCTTGTTTGTCTTCATTGGGACCTTAATGT...TGGAGTACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR TCA 90 bp AAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGACATTAAGGTCCCAATaGAGACAAACAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KRWSDLHRVPPSRRHWSTTLRSQ*RQTRCP
Trigger: TGGGCACCTTGTTTGTCTTCATTGGGACCTTAATGT...CGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR GCA 90 bp ACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTATATCTCTGGCTCCCTTaGAACTTGCCTCACTTGATT +
Preference number: 4 (lower is better)
Translates to: TVVRPSQGPTLTTTLVYVYLWLP*NLPHLI
Trigger: AATCAAGTGAGGCAAGTTGCAAGGGAGCCAGAGATA...TACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp AGCCAAGAAGACGAAACCCGGAAGTGGAAGGGCGTGATTATAAAACAAAGCCTCCACATCGCACCGTCCTaGAAAGCCGCTCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: SQEDETRKWKGVIIKQSLHIAPS*KAALTG
Trigger: CCCAGTGAGAGCGGCTTTCCAGGACGGTGCGATGTG...GAGGCTTTGTTTTATAATCACGCCCTTCCACTTCCGGGTTTCGTCTTCTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR CCA 90 bp GGTTTACTCTGGGTGGCACAGACCAATTCAGCTTTCATGGTCTTCCTCCGTAGCCCCTCACGACGACACTaGTCTACGTACTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: GLLWVAQTNSAFMVFLRSPSRRH*STYSRQ
Trigger: CTGTCTGGAGTACGTAGACCAGTGTCGTCGTGAGGG...GCTACGGAGGAAGACCATGAAAGCTGAATTGGTCTGTGCCACCCAGAGTAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp CTCGGCATTAACAAAAGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACAAAAGCGAAACGGTaGTCAGACCTTCACAGGGTC +
Preference number: 4 (lower is better)
Translates to: LGINKSETVVRPSQGPTLTKAKR*SDLHRV
Trigger: GACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGT...GAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGTTAATGCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CCA 90 bp CCTCCATGTGCATTTCTCTGTCCGTTTAGGTCAATGCCAACTGGTCCACCAGTGTCCTTCCCAAAACGCTaGAGGAAGTCCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PPCAFLCPFRSMPTGPPVSFPKR*RKSSPA
Trigger: AGCAGGGCTGGACTTCCTCCAGCGTTTTGGGAAGGA...CACTGGTGGACCAGTTGGCATTGACCTAAACGGACAGAGAAATGCACATGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp CCAAAACGCTGGAGGAAGTCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTTGTCCCTTGATGGGTCGTaGCTCTTAACAGAGTCATCG +
Preference number: 4 (lower is better)
Translates to: PKRWRKSSPAVTGVSVYLSLDGS*LLTESS
Trigger: CGATGACTCTGTTAAGAGTCACGACCCATCAAGGGA...CAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGACTTCCTCCAGCGTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp GAGTCATCGGGCAGAGGGGAATCTCCTGGTGGTGAAGCCTTATCCTCCCACTTGCTGAGGTATTCACGCTaGGATGAATACACATGCTCT +
Preference number: 4 (lower is better)
Translates to: ESSGRGESPGGEALSSHLLRYSR*DEYTCS
Trigger: AGAGCATGTGTATTCATCTCAGCGTGAATACCTCAG...CAAGTGGGAGGATAAGGCTTCACCACCAGGAGATTCCCCTCTGCCCGATGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp GGTTTACTCTGGGTGGCACAGACCAATTCAGCTTTCATGGTCTTCCTCCGTAGCGAAATGAGTAAGACATaGTCCCTGGCCCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: GLLWVAQTNSAFMVFLRSEMSKT*SLAPPI
Trigger: GATGGGAGGGGCCAGGGATCATGTCTTACTCATTTC...GCTACGGAGGAAGACCATGAAAGCTGAATTGGTCTGTGCCACCCAGAGTAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp CCTCCATGTGCATTTCTCTGTCCGTTTAGGTCAATGCCAACTGGTCCACCAGTGATCCAGAGCCAAAAGTaGGGTAGCAGGCTGCACACT +
Preference number: 4 (lower is better)
Translates to: PPCAFLCPFRSMPTGPPVIQSQK*GSRLHT
Trigger: AGTGTGCAGCCTGCTACCTCACTTTTGGCTCTGGAT...CACTGGTGGACCAGTTGGCATTGACCTAAACGGACAGAGAAATGCACATGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp TCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTTGGCCACTCCTGGTGATAGTCTGAAGATTTCCTTTTaGACGGCTGGCTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: SSPAVTGVSVYLATPGDSLKISF*TAGSAL
Trigger: CAGTGCTGAGCCAGCCGTGCAAAAGGAAATCTTCAG...ACTATCACCAGGAGTGGCCAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp GGTTTACTCTGGGTGGCACAGACCAATTCAGCTTTCATGGTCTTCCTCCGTAGCGTGCAGCCACTTCCGTaGCCTTTGATCACACACAGA +
Preference number: 4 (lower is better)
Translates to: GLLWVAQTNSAFMVFLRSVQPLP*PLITHR
Trigger: TCTGTGTGTGATCAAAGGGCACGGAAGTGGCTGCAC...GCTACGGAGGAAGACCATGAAAGCTGAATTGGTCTGTGCCACCCAGAGTAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp AGATCAGACCAACAGACAGTGATCTCCAGGCATCAGCTTCAGCTGCTACAAGCTAATGTTCCCACATCCTaGATGCTTCCGGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RSDQQTVISRHQLQLLQANVPTS*MLPGQE
Trigger: CTCCTGGCCCGGAAGCATCCAGGATGTGGGAACATT...AGCTTGTAGCAGCTGAAGCTGATGCCTGGAGATCACTGTCTGTTGGTCTGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp CCTTCTGAGGCTCACTTTTTGTGGTCCCTAGGTTGTTCCACACCTCTGTGTACAAATGTTCCCACATCCTaGATGCTTCCGGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSEAHFLWSLGCSTPLCTNVPTS*MLPGQE
Trigger: CTCCTGGCCCGGAAGCATCCAGGATGTGGGAACATT...TGTACACAGAGGTGTGGAACAACCTAGGGACCACAAAAAGTGAGCCTCAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR CCA 90 bp CTCGGCATTAACAAAAGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCTATTGGGATAGCTGGTaGCTTCCTTCCCAAATCAGC +
Preference number: 4 (lower is better)
Translates to: LGINKSETVVRPSQGPTLYWDSW*LPSQIS
Trigger: GCTGATTTGGGAAGGAAGCCACCAGCTATCCCAATA...GAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGTTAATGCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CCA 90 bp CTCGGCATTAACAAAAGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCGGCATAGTACCTTATTaGGATAGCTGGTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGINKSETVVRPSQGPTLGIVPY*DSWWLP
Trigger: AGGAAGCCACCAGCTATCCCAATAAGGTACTATGCC...GAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGTTAATGCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CCA 90 bp GCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTTTCCTAGAATCATGTTaGCAATTAGAGAACCGGATC +
Preference number: 4 (lower is better)
Translates to: AKRWSDLHRVPPSRRHWSFLESC*QLENRI
Trigger: GATCCGGTTCTCTAATTGCCAACATGATTCTAGGAA...AGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp TCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTTGGCCACTCCTGGTGATAGTACAAAAGCGAAACGGTaGTCAGACCTTCACAGGGTC +
Preference number: 4 (lower is better)
Translates to: SSPAVTGVSVYLATPGDSTKAKR*SDLHRV
Trigger: GACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGT...ACTATCACCAGGAGTGGCCAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp CGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTATCTCCCATTCCAGCTTaGTACACACTGAACACATTT +
Preference number: 4 (lower is better)
Translates to: RNGGQTFTGSHPHDDTGLSPIPA*YTLNTF
Trigger: AAATGTGTTCAGTGTGTACCAAGCTGGAATGGGAGA...TAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp GCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTCACTACTGCTCTCTTTaGTTCACAAGAGTCATCTAT +
Preference number: 4 (lower is better)
Translates to: AKRWSDLHRVPPSRRHWSHYCSL*FTRVIY
Trigger: ATAGATGACTCTTGTGAACCAAAGAGAGCAGTAGTG...AGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp CGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTATGGAATGAAAGCAACTaGCACAGAAATGACTGGCAA +
Preference number: 4 (lower is better)
Translates to: RNGGQTFTGSHPHDDTGLWNESN*HRNDWQ
Trigger: TTGCCAGTCATTTCTGTGCCAGTTGCTTTCATTCCA...TAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp TACATGTGTCAGTCTGAGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTTGGCCAGTGCCACAGGGTaGAGGGGTTCTGGAAGTACA +
Preference number: 4 (lower is better)
Translates to: YMCQSEQREKSPPEDFLLASATG*RGSGST
Trigger: TGTACTTCCAGAACCCCTTCACCCTGTGGCACTGGC...CAAAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCTCAGACTGACACATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR TCA 90 bp AACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTATTGTCGTTGAGGTTTaGCCTGATTTACACATCACA +
Preference number: 4 (lower is better)
Translates to: NGGQTFTGSHPHDDTGLRIVVEV*PDLHIT
Trigger: TGTGATGTGTAAATCAGGTCAAACCTCAACGACAAT...ACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp CGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTAGTGACATTATGTATGTaGGGCTGCATCCTATTAAGA +
Preference number: 4 (lower is better)
Translates to: RNGGQTFTGSHPHDDTGLVTLCM*GCILLR
Trigger: TCTTAATAGGATGCAGCCTCACATACATAATGTCAC...TAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp CCAAAACGCTGGAGGAAGTCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTTGGAAGGAGTTCTGAAGTaGAACAGAGGAAAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PKRWRKSSPAVTGVSVYLEGVLK*NRGKLL
Trigger: GAGCAGCTTTCCTCTGTTTCACTTCAGAACTCCTTC...CAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGACTTCCTCCAGCGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp CGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTATCAGGAGAAAGCTATTaGGACCAATATGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: RNGGQTFTGSHPHDDTGLSGESY*DQYALV
Trigger: AACCAAAGCATATTGGTCTCAATAGCTTTCTCCTGA...TAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp GATGATGTTCATGAGGAGGTAGAACCACATGATGGGCAGGGTCACTCCGATGACCTGAAGATTTCCTTTTaGACGGCTGGCTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: DDVHEEVEPHDGQGHSDDLKISF*TAGSAL
Trigger: CAGTGCTGAGCCAGCCGTGCAAAAGGAAATCTTCAG...GTCATCGGAGTGACCCTGCCCATCATGTGGTTCTACCTCCTCATGAACATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR GCA 90 bp GAGTCATCGGGCAGAGGGGAATCTCCTGGTGGTGAAGCCTTATCCTCCCACTTGCAGGATGACAATGACTaGTGTAGCAGAGATGCATTA +
Preference number: 4 (lower is better)
Translates to: ESSGRGESPGGEALSSHLQDDND*CSRDAL
Trigger: TAATGCATCTCTGCTACAGCAGTCATTGTCATCCTG...CAAGTGGGAGGATAAGGCTTCACCACCAGGAGATTCCCCTCTGCCCGATGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp CGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCCTCAGAAACTGTCAGGTAATCACATCGCACCGTCCTaGAAAGCCGCTCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: RGQVKSKTETLPQKLSGNHIAPS*KAALTG
Trigger: CCCAGTGAGAGCGGCTTTCCAGGACGGTGCGATGTG...ATTACCTGACAGTTTCTGAGGCAGAGTCTCAGTTTTACTCTTGACTTGACCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CCA 90 bp TGGAAGGGCGTGATTATAAAACAAAGCCTCCTTGGAGTGTTTCCCAAATCGTTTTGGCCGGTGCAGGGTTaGGGAAGCAAGCGCACAGAG +
Preference number: 4 (lower is better)
Translates to: WKGVIIKQSLLGVFPKSFWPVQG*GSKRTE
Trigger: CTCTGTGCGCTTGCTTCCCCAACCCTGCACCGGCCA...AAACGATTTGGGAAACACTCCAAGGAGGCTTTGTTTTATAATCACGCCCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR CCA 90 bp TATGAAAAAGGCCGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCCTCAGAAATGGCCGGTGCAGGGTTaGGGAAGCAAGCGCACAGAG +
Preference number: 4 (lower is better)
Translates to: YEKGRGQVKSKTETLPQKWPVQG*GSKRTE
Trigger: CTCTGTGCGCTTGCTTCCCCAACCCTGCACCGGCCA...TTTCTGAGGCAGAGTCTCAGTTTTACTCTTGACTTGACCTCGGCCTTTTTCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CCA 90 bp AAGATGAGGCTCACAAATTTGCGTAGGGTCACGACGAGCGTGACGGTGAGGGAGGACGAAACCCGGAAGTaGAAGGGCGTGATTATAAAA +
Preference number: 4 (lower is better)
Translates to: KMRLTNLRRVTTSVTVREDETRK*KGVIIK
Trigger: TTTTATAATCACGCCCTTCCACTTCCGGGTTTCGTC...CTCCCTCACCGTCACGCTCGTCGTGACCCTACGCAAATTTGTGAGCCTCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR CCA 90 bp CTCGGCATTAACAAAAGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCTGCAGCGTTTCACTGTaGTTAACAGGATGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: LGINKSETVVRPSQGPTLCSVSL*LTGWKG
Trigger: TCCTTTCCATCCTGTTAACCACAGTGAAACGCTGCA...GAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGTTAATGCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp AGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCGAGACCAATATGCTTTaGTTATCTAATAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SETVVRPSQGPTLTTTLVETNML*LSNKGG
Trigger: TCCACCCTTATTAGATAACCAAAGCATATTGGTCTC...GACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp GGTTTACTCTGGGTGGCACAGACCAATTCAGCTTTCATGGTCTTCCTCCGTAGCGGCCATTCTCTGGAATaGAAGCAACTGGCACAGAAA +
Preference number: 4 (lower is better)
Translates to: GLLWVAQTNSAFMVFLRSGHSLE*KQLAQK
Trigger: TTTCTGTGCCAGTTGCTTTCATTCCAGAGAATGGCC...GCTACGGAGGAAGACCATGAAAGCTGAATTGGTCTGTGCCACCCAGAGTAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp ATAAAACAAAGCCTCCTTGGAGTGTTTCCCAAATCGTTTGTAGAGAGTCTCTTGGTTACTGCAGCAGCCTaGGAACACCAGGCCCACCGC +
Preference number: 4 (lower is better)
Translates to: IKQSLLGVFPKSFVESLLVTAAA*EHQAHR
Trigger: GCGGTGGGCCTGGTGTTCGCAGGCTGCTGCAGTAAC...CAAGAGACTCTCTACAAACGATTTGGGAAACACTCCAAGGAGGCTTTGTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR GCA 90 bp AATAGGATTATGAAAAAGGCCGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCGTTACTGCAGCAGCCTaGGAACACCAGGCCCACCGC +
Preference number: 4 (lower is better)
Translates to: NRIMKKAEVKSRVKLRLCVTAAA*EHQAHR
Trigger: GCGGTGGGCCTGGTGTTCGCAGGCTGCTGCAGTAAC...GCAGAGTCTCAGTTTTACTCTTGACTTGACCTCGGCCTTTTTCATAATCCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR GCA 90 bp CCAAAACGCTGGAGGAAGTCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTTGGACTGGGAAGTCACCTaGTTTGCTGACATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: PKRWRKSSPAVTGVSVYLDWEVT*FADIKV
Trigger: CACTTTTATGTCAGCAAAGCAGGTGACTTCCCAGTC...CAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGACTTCCTCCAGCGTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp CGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTAGGCATTCACACATTCTaGCAGATATTCTCACTATTA +
Preference number: 4 (lower is better)
Translates to: RNGGQTFTGSHPHDDTGLGIHTF*QIFSLL
Trigger: TAATAGTGAGAATATCTGGCAGAATGTGTGAATGCC...TAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp TTCCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGAGTGAGGTAGCAGGCTaGACACTGAGCAATCTCTGG +
Preference number: 4 (lower is better)
Translates to: FPGNLGLSASICGHLVRVSEVAG*TLSNLW
Trigger: CCAGAGATTGCTCAGTGTGCAGCCTGCTACCTCACT...CACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp AAAGGCCGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCCTCAGAAACTGTCAAATGTTCCCACATCCTaGATGCTTCCGGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: KGRGQVKSKTETLPQKLSNVPTS*MLPGQE
Trigger: CTCCTGGCCCGGAAGCATCCAGGATGTGGGAACATT...TGACAGTTTCTGAGGCAGAGTCTCAGTTTTACTCTTGACTTGACCTCGGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CCA 90 bp CCTCCTTGGAGTGTTTCCCAAATCGTTTGTAGAGAGTCTCTTGGAATATCCCCACCCTCACGACGACACTaGTCTACGTACTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: PPWSVSQIVCRESLGISPPSRRH*STYSRQ
Trigger: CTGTCTGGAGTACGTAGACCAGTGTCGTCGTGAGGG...TGGGGATATTCCAAGAGACTCTCTACAAACGATTTGGGAAACACTCCAAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR CCA 90 bp GGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTACTCCATCTTTTCCAAGACCATaGATAGTAAGCCTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: GQTFTGSHPHDDTGLRTPSFPRP*IVSLLF
Trigger: GAACAAAAGGCTTACTATCCATGGTCTTGGAAAAGA...TGGAGTACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp GAGTCATCGGGCAGAGGGGAATCTCCTGGTGGTGAAGCCTTATCCTCCCACTTGAATAGCTCTGGACAGTaGAATAAACATACCACACCA +
Preference number: 4 (lower is better)
Translates to: ESSGRGESPGGEALSSHLNSSGQ*NKHTTP
Trigger: TGGTGTGGTATGTTTATTCCACTGTCCAGAGCTATT...CAAGTGGGAGGATAAGGCTTCACCACCAGGAGATTCCCCTCTGCCCGATGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp GGTTTACTCTGGGTGGCACAGACCAATTCAGCTTTCATGGTCTTCCTCCGTAGCGAGGTTTACTCTGGGTaGCACAGACCAATTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GLLWVAQTNSAFMVFLRSEVYSG*HRPIQL
Trigger: AAGCTGAATTGGTCTGTGCCACCCAGAGTAAACCTC...GCTACGGAGGAAGACCATGAAAGCTGAATTGGTCTGTGCCACCCAGAGTAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp CACACAGACTACACAAGAGCACACAGAAGCTACGCATATTACAGCAACAGCGTTCCCGCTGATGAGGAGTaGGAACAGGTATCACGAACC +
Preference number: 4 (lower is better)
Translates to: HTDYTRAHRSYAYYSNSVPADEE*EQVSRT
Trigger: GGTTCGTGATACCTGTTCCCACTCCTCATCAGCGGG...AACGCTGTTGCTGTAATATGCGTAGCTTCTGTGTGCTCTTGTGTAGTCTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp CCAAAACGCTGGAGGAAGTCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTTGAATGAGGCCATTCTCTaGAATGAAAGCAACTGGCAC +
Preference number: 4 (lower is better)
Translates to: PKRWRKSSPAVTGVSVYLNEAIL*NESNWH
Trigger: GTGCCAGTTGCTTTCATTCCAGAGAATGGCCTCATT...CAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGACTTCCTCCAGCGTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp CCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGTTGGGGCATGGCAATGTTaGGATTCAGGGCATAGTTGT +
Preference number: 4 (lower is better)
Translates to: PREFGAFCFYMWSSCASVGAWQC*DSGHSC
Trigger: ACAACTATGCCCTGAATCTCAACATTGCCATGCCCC...AACACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp TCTACATGTGTCAGTCTGAGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTGCCGGTGAGTTCAGCTaGTTACAGAGGAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: STCVSLSNVRSPLLKISFAGEFS*LQRSMY
Trigger: GTACATGCTCCTCTGTAAGCAGCTGAACTCACCGGC...AAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCTCAGACTGACACATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp CCTTCTGAGGCTCACTTTTTGTGGTCCCTAGGTTGTTCCACACCTCTGTGTACATATTGGGATAGCTGGTaGCTTCCTTCCCAAATCAGC +
Preference number: 4 (lower is better)
Translates to: PSEAHFLWSLGCSTPLCTYWDSW*LPSQIS
Trigger: GCTGATTTGGGAAGGAAGCCACCAGCTATCCCAATA...TGTACACAGAGGTGTGGAACAACCTAGGGACCACAAAAAGTGAGCCTCAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR CCA 90 bp CCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGTTCATTCTCACTCAAGCTaGACTGGGAAGTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: PREFGAFCFYMWSSCASVHSHSS*TGKSPA
Trigger: AGCAGGTGACTTCCCAGTCCAGCTTGAGTGAGAATG...AACACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp CTCGGCATTAACAAAAGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCAAAACAAAGCCTCCTTaGAGTGTTTCCCAAATCGTT +
Preference number: 4 (lower is better)
Translates to: LGINKSETVVRPSQGPTLKTKPP*SVSQIV
Trigger: AACGATTTGGGAAACACTCCAAGGAGGCTTTGTTTT...GAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGTTAATGCCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CCA 90 bp CCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGTTGTGTCTCGGTTTACTTaGCCACTCCTGGTGATAGTG +
Preference number: 4 (lower is better)
Translates to: PREFGAFCFYMWSSCASVVSRFT*PLLVIV
Trigger: CACTATCACCAGGAGTGGCCAAGTAAACCGAGACAC...AACACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CAA 72 bp AAAAGGGATGTGAAAGTGCAGCCACTTCCGTGCCCTTaGATCACACACAGACTACACAAGAGCACACAGAAG +
Preference number: 4 (lower is better)
Translates to: KRDVKVQPLPCP*ITHRLHKSTQK
Trigger: CTTCTGTGTGCTCTTGTGTAGTCTGTGTGTGATCAAAGGGCACGGAAGTGGCTGCACTTTCACATCCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp CACACAGACTACACAAGAGCACACAGAAGCTACGCATATTACAGCAACAGCGTTTCACCACGCTCACGGTaGAGAACATGGTCACCATTA +
Preference number: 4 (lower is better)
Translates to: HTDYTRAHRSYAYYSNSVSPRSR*RTWSPL
Trigger: TAATGGTGACCATGTTCTTCACCGTGAGCGTGGTGA...AACGCTGTTGCTGTAATATGCGTAGCTTCTGTGTGCTCTTGTGTAGTCTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp AAAGGCCGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCCTCAGAAACTGTCATCACCACGCTCACGGTaGAGAACATGGTCACCATTA +
Preference number: 4 (lower is better)
Translates to: KGRGQVKSKTETLPQKLSSPRSR*RTWSPL
Trigger: TAATGGTGACCATGTTCTTCACCGTGAGCGTGGTGA...TGACAGTTTCTGAGGCAGAGTCTCAGTTTTACTCTTGACTTGACCTCGGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR TCA 90 bp ATAAAACAAAGCCTCCTTGGAGTGTTTCCCAAATCGTTTGTAGAGAGTCTCTTGGGAGGTAGAACCACATaGTGGGCAGGGTCACTCCGA +
Preference number: 4 (lower is better)
Translates to: IKQSLLGVFPKSFVESLLGGRTT*WAGSLR
Trigger: TCGGAGTGACCCTGCCCATCATGTGGTTCTACCTCC...CAAGAGACTCTCTACAAACGATTTGGGAAACACTCCAAGGAGGCTTTGTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR TCA 90 bp TCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTTGGCCACTCCTGGTGATAGTACAAGATGGAAAAGATaGGGCTCACAAATTTGCGTA +
Preference number: 4 (lower is better)
Translates to: SSPAVTGVSVYLATPGDSTRWKR*GSQICV
Trigger: TACGCAAATTTGTGAGCCTCATCTTTTCCATCTTGT...ACTATCACCAGGAGTGGCCAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp TCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTTGGCCACTCCTGGTGATAGTACTGGCAATCGCAAGTaGTACACAAAGGCATTTTTA +
Preference number: 4 (lower is better)
Translates to: SSPAVTGVSVYLATPGDSTGNRK*YTKAFL
Trigger: TAAAAATGCCTTTGTGTATCACTTGCGATTGCCAGT...ACTATCACCAGGAGTGGCCAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp CGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCCTCAGAAACTGTCAGGTAATGGAAGATCACGTTACTaGAGCAGCCTGCGAACACCA +
Preference number: 4 (lower is better)
Translates to: RGQVKSKTETLPQKLSGNGRSRY*SSLRTP
Trigger: TGGTGTTCGCAGGCTGCTGCAGTAACGTGATCTTCC...ATTACCTGACAGTTTCTGAGGCAGAGTCTCAGTTTTACTCTTGACTTGACCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR GCA 90 bp TCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTTGGCCACTCCTGGTGATAGTGACATTTATCTCCACTaGTGTTGCTCAAATCCATCA +
Preference number: 4 (lower is better)
Translates to: SSPAVTGVSVYLATPGDSDIYLH*CCSNPS
Trigger: TGATGGATTTGAGCAACAGCAGTGGAGATAAATGTC...ACTATCACCAGGAGTGGCCAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp TCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTTGGCCACTCCTGGTGATAGTGAATTTGGGGCTTTCTaGTTCTATATGTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: SSPAVTGVSVYLATPGDSEFGAF*FYMWSS
Trigger: AGATGACCACATATAGAAGCAGAAAGCCCCAAATTC...ACTATCACCAGGAGTGGCCAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp TTCCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGGGCATCAGCTTCAGCTaGTACAAGCTAACTGTACCA +
Preference number: 4 (lower is better)
Translates to: FPGNLGLSASICGHLVRVGISFS*YKLTVP
Trigger: TGGTACAGTTAGCTTGTAGCAGCTGAAGCTGATGCC...CACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp AAAGGCCGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCCTCAGAAACTGTCACATTCTCACTCAAGCTaGACTGGGAAGTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: KGRGQVKSKTETLPQKLSHSHSS*TGKSPA
Trigger: AGCAGGTGACTTCCCAGTCCAGCTTGAGTGAGAATG...TGACAGTTTCTGAGGCAGAGTCTCAGTTTTACTCTTGACTTGACCTCGGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CCA 90 bp CCAAAACGCTGGAGGAAGTCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTTGAAAACAAAGCCTCCTTaGAGTGTTTCCCAAATCGTT +
Preference number: 4 (lower is better)
Translates to: PKRWRKSSPAVTGVSVYLKTKPP*SVSQIV
Trigger: AACGATTTGGGAAACACTCCAAGGAGGCTTTGTTTT...CAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGACTTCCTCCAGCGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp TTCCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGGAGGCTCACTTTTTGTaGTCCCTAGGTTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: FPGNLGLSASICGHLVRVEAHFL*SLGCST
Trigger: TGTGGAACAACCTAGGGACCACAAAAAGTGAGCCTC...CACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp GAATACCCACTAATGTCTTGTAGCTGTTCTACGTACTCTCAGCTTTCTACTCCCTCTGGCACTGTTGAGTaGAGCCAGTTAATGGGAAGG +
Preference number: 4 (lower is better)
Translates to: EYPLMSCSCSTYSQLSTPSGTVE*SQLMGR
Trigger: CCTTCCCATTAACTGGCTTCACTCAACAGTGCCAGA...GGGAGTAGAAAGCTGAGAGTACGTAGAACAGCTACAAGACATTAGTGGGTATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp GGTTTACTCTGGGTGGCACAGACCAATTCAGCTTTCATGGTCTTCCTCCGTAGCTGCTCAGGAGATGACTaGGGGATATTTATTAGAATC +
Preference number: 4 (lower is better)
Translates to: GLLWVAQTNSAFMVFLRSCSGDD*GIFIRI
Trigger: GATTCTAATAAATATCCCGCAGTCATCTCCTGAGCA...GCTACGGAGGAAGACCATGAAAGCTGAATTGGTCTGTGCCACCCAGAGTAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp TCTACATGTGTCAGTCTGAGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTCCTTATTTGCTTTCTTaGCAACCCGCTGATGAGGAG +
Preference number: 4 (lower is better)
Translates to: STCVSLSNVRSPLLKISFPYLLS*QPADEE
Trigger: CTCCTCATCAGCGGGTTGGCAAGAAAGCAAATAAGG...AAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCTCAGACTGACACATGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp AAAGGCCGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCCTCAGAAACTGTCACCTTATTGGGATAGCTaGTGGCTTCCTTCCCAAATC +
Preference number: 4 (lower is better)
Translates to: KGRGQVKSKTETLPQKLSPYWDS*WLPSQI
Trigger: GATTTGGGAAGGAAGCCACCAGCTATCCCAATAAGG...TGACAGTTTCTGAGGCAGAGTCTCAGTTTTACTCTTGACTTGACCTCGGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CCA 90 bp TCTACATGTGTCAGTCTGAGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTGGCATAGTACCTTATTaGGATAGCTGGTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: STCVSLSNVRSPLLKISFGIVPY*DSWWLP
Trigger: AGGAAGCCACCAGCTATCCCAATAAGGTACTATGCC...AAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCTCAGACTGACACATGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CCA 90 bp CCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGTTGACGAAACCCGGAAGTaGAAGGGCGTGATTATAAAA +
Preference number: 4 (lower is better)
Translates to: PREFGAFCFYMWSSCASVDETRK*KGVIIK
Trigger: TTTTATAATCACGCCCTTCCACTTCCGGGTTTCGTC...AACACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp TACATGTGTCAGTCTGAGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTTGAAACATACCACACCATaGAATGAGCCCAGGAGACCT +
Preference number: 4 (lower is better)
Translates to: YMCQSEQREKSPPEDFLLKHTTP*NEPRRP
Trigger: AGGTCTCCTGGGCTCATTCCATGGTGTGGTATGTTT...CAAAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCTCAGACTGACACATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp CCTCCATGTGCATTTCTCTGTCCGTTTAGGTCAATGCCAACTGGTCCACCAGTGTTCTGCTTCTATATGTaGTCATCTTGTGCGAGTGTT +
Preference number: 4 (lower is better)
Translates to: PPCAFLCPFRSMPTGPPVFCFYM*SSCASV
Trigger: AACACTCGCACAAGATGACCACATATAGAAGCAGAA...CACTGGTGGACCAGTTGGCATTGACCTAAACGGACAGAGAAATGCACATGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp GACGAAACCCGGAAGTGGAAGGGCGTGATTATAAAACAAAGCCTCCTTGGAGTGACAAGATGGAAAAGATaGGGCTCACAAATTTGCGTA +
Preference number: 4 (lower is better)
Translates to: DETRKWKGVIIKQSLLGVTRWKR*GSQICV
Trigger: TACGCAAATTTGTGAGCCTCATCTTTTCCATCTTGT...CACTCCAAGGAGGCTTTGTTTTATAATCACGCCCTTCCACTTCCGGGTTTCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR TCA 90 bp AGTGTTTCCCAAATCGTTTGTAGAGAGTCTCTTGGAATATCCCCATCCTTGCTGTTCTTGCTGTCCTTCTaGGGCTCACTTTTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SVSQIVCRESLGISPSLLFLLSF*GSLFVV
Trigger: GACCACAAAAAGTGAGCCTCAGAAGGACAGCAAGAA...CAGCAAGGATGGGGATATTCCAAGAGACTCTCTACAAACGATTTGGGAAACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR TCA 90 bp CACACAGACTACACAAGAGCACACAGAAGCTACGCATATTACAGCAACAGCGTTCCCAAGTACTGTCTGTaGACATCAACACATACCCAA +
Preference number: 4 (lower is better)
Translates to: HTDYTRAHRSYAYYSNSVPKYCL*TSTHTQ
Trigger: TTGGGTATGTGTTGATGTTCACAGACAGTACTTGGG...AACGCTGTTGCTGTAATATGCGTAGCTTCTGTGTGCTCTTGTGTAGTCTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp TACATGTGTCAGTCTGAGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTTGATTCATAAGACTGGCTaGGGTATTCACGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: YMCQSEQREKSPPEDFLLIHKTG*GIHAEM
Trigger: CATCTCAGCGTGAATACCTCAGCCAGTCTTATGAAT...CAAAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCTCAGACTGACACATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp AGATCAGACCAACAGACAGTGATCTCCAGGCATCAGCTTCAGCTGCTACAAGCTCTGGAAGCCGATGTTTaGTATTTACACAGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: RSDQQTVISRHQLQLLQALEADV*YLHSSK
Trigger: TTTTGAGCTGTGTAAATATCAAACATCGGCTTCCAG...AGCTTGTAGCAGCTGAAGCTGATGCCTGGAGATCACTGTCTGTTGGTCTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp CCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGTTGGGAATAACCACTACTaGTCTCTTTGGTTCACAAGA +
Preference number: 4 (lower is better)
Translates to: PREFGAFCFYMWSSCASVGNNHY*SLWFTR
Trigger: TCTTGTGAACCAAAGAGAGCAGTAGTGGTTATTCCC...AACACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp CCTCCTTGGAGTGTTTCCCAAATCGTTTGTAGAGAGTCTCTTGGAATATCCCCACACCACACAAATGCCTaGAATCCATCATTCTCACTC +
Preference number: 4 (lower is better)
Translates to: PPWSVSQIVCRESLGISPHHTNA*NPSFSL
Trigger: GAGTGAGAATGATGGATTCCAGGCATTTGTGTGGTG...TGGGGATATTCCAAGAGACTCTCTACAAACGATTTGGGAAACACTCCAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR CCA 90 bp TACATGTGTCAGTCTGAGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTTGTTTTTCACGTATCTCTaGCTCCCTTGCAACTTGCCT +
Preference number: 4 (lower is better)
Translates to: YMCQSEQREKSPPEDFLLFFTYL*LPCNLP
Trigger: AGGCAAGTTGCAAGGGAGCCAGAGATACGTGAAAAA...CAAAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCTCAGACTGACACATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp TCTACATGTGTCAGTCTGAGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTAAAATTACATGGTCTTaGCCCAGAGAAAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: STCVSLSNVRSPLLKISFKITWS*PRERGE
Trigger: CTCTCCTCTTTCTCTGGGTCAAGACCATGTAATTTT...AAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCTCAGACTGACACATGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp TTCCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGACAGACATAGGATCTTaGTTTCAACGTAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: FPGNLGLSASICGHLVRVTDIGS*FQRSSP
Trigger: AGGAGAACTACGTTGAAATCAAGATCCTATGTCTGT...CACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp TTGGATATTTCTAGCACCGTCAATTCTGAGGAACTCTACATATTTCAAAGCAAGAGAGCTCAGACGGGATaGATAAAATCCCCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LDISSTVNSEELYIFQSKRAQTG*IKSPPS
Trigger: GGACGGCGGGGATTTTATTCATCCCGTCTGAGCTCT...CTTGCTTTGAAATATGTAGAGTTCCTCAGAATTGACGGTGCTAGAAATATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp AAAGCTTTTGCTGCTGCAATGACTGGAAAGTGGAATGGAGACATTTTCGAAAGGCTTTTGCTGCTGCAATaGCTGGAAAGTGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: KAFAAAMTGKWNGDIFERLLLLQ*LESGME
Trigger: CTCCATTCCACTTTCCAGTCATTGCAGCAGCAAAAG...CCTTTCGAAAATGTCTCCATTCCACTTTCCAGTCATTGCAGCAGCAAAAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR GCA 90 bp AGTGTTTCCCAAATCGTTTGTAGAGAGTCTCTTGGAATATCCCCATCCTTGCTGGACTGGGAAGTCACCTaGTTTGCTGACATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SVSQIVCRESLGISPSLLDWEVT*FADIKV
Trigger: CACTTTTATGTCAGCAAAGCAGGTGACTTCCCAGTC...CAGCAAGGATGGGGATATTCCAAGAGACTCTCTACAAACGATTTGGGAAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR GCA 90 bp CCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGTTATATATCTCCATCTATaGATTCCCTTGATGGGTCGT +
Preference number: 4 (lower is better)
Translates to: PREFGAFCFYMWSSCASVIYLHL*IPLMGR
Trigger: ACGACCCATCAAGGGAATGCATAGATGGAGATATAT...AACACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp TATGAAAAAGGCCGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCCTCAGAAATATTGGGATAGCTGGTaGCTTCCTTCCCAAATCAGC +
Preference number: 4 (lower is better)
Translates to: YEKGRGQVKSKTETLPQKYWDSW*LPSQIS
Trigger: GCTGATTTGGGAAGGAAGCCACCAGCTATCCCAATA...TTTCTGAGGCAGAGTCTCAGTTTTACTCTTGACTTGACCTCGGCCTTTTTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CCA 90 bp TTCCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGACATGGTCACCATTATaGCATAGTACCTTATTGGGA +
Preference number: 4 (lower is better)
Translates to: FPGNLGLSASICGHLVRVTWSPL*HSTLLG
Trigger: TCCCAATAAGGTACTATGCCATAATGGTGACCATGT...CACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp GCCGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCCTCAGAAACTGTCAGGTAAAAACAAAGCCTCCTTaGAGTGTTTCCCAAATCGTT +
Preference number: 4 (lower is better)
Translates to: AEVKSRVKLRLCLRNCQVKTKPP*SVSQIV
Trigger: AACGATTTGGGAAACACTCCAAGGAGGCTTTGTTTT...TACCTGACAGTTTCTGAGGCAGAGTCTCAGTTTTACTCTTGACTTGACCTCGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CCA 90 bp TACATGTGTCAGTCTGAGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTTGCGTCATCTACAGATATaGCATTCACACATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: YMCQSEQREKSPPEDFLLRHLQI*HSHILP
Trigger: TGGCAGAATGTGTGAATGCCATATCTGTAGATGACG...CAAAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCTCAGACTGACACATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp TATGAAAAAGGCCGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCCTCAGAAATATCCCCATCCTTGCTaGCATCAGAAGAGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: YEKGRGQVKSKTETLPQKYPHPC*HQKSKS
Trigger: ACTTTTGCTCTTCTGATGTCAGCAAGGATGGGGATA...TTTCTGAGGCAGAGTCTCAGTTTTACTCTTGACTTGACCTCGGCCTTTTTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR GCA 90 bp CCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGTTTATGTGGTCATCTTGTaGGAGTGTTCTAATCTAATC +
Preference number: 4 (lower is better)
Translates to: PREFGAFCFYMWSSCASVYVVIL*ECSNLI
Trigger: GATTAGATTAGAACACTCGCACAAGATGACCACATA...AACACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp TTGGATATTTCTAGCACCGTCAATTCTGAGGAACTCTACATATTTCAAAGCAAGATAAGCCAGACACTATaGCAGGGGCTGGCGATACAG +
Preference number: 4 (lower is better)
Translates to: LDISSTVNSEELYIFQSKISQTL*QGLAIQ
Trigger: CTGTATCGCCAGCCCCTGGCATAGTGTCTGGCTTAT...CTTGCTTTGAAATATGTAGAGTTCCTCAGAATTGACGGTGCTAGAAATATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp TCTACATGTGTCAGTCTGAGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTACATGGTCACCATTATaGCATAGTACCTTATTGGGA +
Preference number: 4 (lower is better)
Translates to: STCVSLSNVRSPLLKISFTWSPL*HSTLLG
Trigger: TCCCAATAAGGTACTATGCCATAATGGTGACCATGT...AAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCTCAGACTGACACATGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CCA 90 bp AAAGCTTTTGCTGCTGCAATGACTGGAAAGTGGAATGGAGACATTTTCGAAAGGCACCACACAAATGCCTaGAATCCATCATTCTCACTC +
Preference number: 4 (lower is better)
Translates to: KAFAAAMTGKWNGDIFERHHTNA*NPSFSL
Trigger: GAGTGAGAATGATGGATTCCAGGCATTTGTGTGGTG...CCTTTCGAAAATGTCTCCATTCCACTTTCCAGTCATTGCAGCAGCAAAAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CCA 90 bp AAAGCTTTTGCTGCTGCAATGACTGGAAAGTGGAATGGAGACATTTTCGAAAGGTGCTGCTGCAATGACTaGAAAGTGGAATGGAGACAT +
Preference number: 4 (lower is better)
Translates to: KAFAAAMTGKWNGDIFERCCCND*KVEWRH
Trigger: ATGTCTCCATTCCACTTTCCAGTCATTGCAGCAGCA...CCTTTCGAAAATGTCTCCATTCCACTTTCCAGTCATTGCAGCAGCAAAAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470969.2
3UTR CAA 72 bp TCTCTTGCTTGGAATGTTAAAAATGTTTCCCCTTATTaGCTTTCTTGCCAACCCGCTGATGAGGAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SLAWNVKNVSPY*LSCQPADEEWE
Trigger: TTCCCACTCCTCATCAGCGGGTTGGCAAGAAAGCAAATAAGGGGAAACATTTTTAACATTCCAAGCAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp TTGGATATTTCTAGCACCGTCAATTCTGAGGAACTCTACATATTTCAAAGCAAGCGGATGCACACGTACTaGGTGATGATGTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: LDISSTVNSEELYIFQSKRMHTY*VMMFMR
Trigger: CCTCATGAACATCATCACTCAGTACGTGTGCATCCG...CTTGCTTTGAAATATGTAGAGTTCCTCAGAATTGACGGTGCTAGAAATATCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp TTGGATATTTCTAGCACCGTCAATTCTGAGGAACTCTACATATTTCAAAGCAAGTGGGGGAAGGAGTTCTaGAGTGAAACAGAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LDISSTVNSEELYIFQSKWGKEF*SETEES
Trigger: GCTTTCCTCTGTTTCACTTCAGAACTCCTTCCCCCA...CTTGCTTTGAAATATGTAGAGTTCCTCAGAATTGACGGTGCTAGAAATATCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp TCGTTGAGGTTTGACCTGATTTACACATCACACACTATATATCTCCATCTATGCCAACTGGCACAGAAATaGCTGGCAATCGCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: SLRFDLIYTSHTIYLHLCQLAQK*LAIASD
Trigger: ATCACTTGCGATTGCCAGTCATTTCTGTGCCAGTTG...GCATAGATGGAGATATATAGTGTGTGATGTGTAAATCAGGTCAAACCTCAACGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
3UTR CAA 72 bp GCTCAGGAGATGACTGCGGGATATTTATTAGAATCCTaGAAAAACATCACGCCATCTTTCCAGAAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: AQEMTAGYLLES*KNITPSFQKKR
Trigger: TCTCTTCTTCTGGAAAGATGGCGTGATGTTTTTCAAGGATTCTAATAAATATCCCGCAGTCATCTCCTGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR GCA 90 bp GAATACCCACTAATGTCTTGTAGCTGTTCTACGTACTCTCAGCTTTCTACTCCCACCAAATCAAAATACTaGAGCGTTTCACTGTGGTTA +
Preference number: 4 (lower is better)
Translates to: EYPLMSCSCSTYSQLSTPTKSKY*SVSLWL
Trigger: TAACCACAGTGAAACGCTGCAGTATTTTGATTTGGT...GGGAGTAGAAAGCTGAGAGTACGTAGAACAGCTACAAGACATTAGTGGGTATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp AAAGGAACACATGATTTGAATAGGATTATGAAAAAGGCCGAGGTCAAGTCAAGAGGCATAGTACCTTATTaGGATAGCTGGTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KGTHDLNRIMKKAEVKSRGIVPY*DSWWLP
Trigger: AGGAAGCCACCAGCTATCCCAATAAGGTACTATGCC...TCTTGACTTGACCTCGGCCTTTTTCATAATCCTATTCAAATCATGTGTTCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CCA 90 bp AAAGCTTTTGCTGCTGCAATGACTGGAAAGTGGAATGGAGACATTTTCGAAAGGTTCCTAGAATCATGTTaGCAATTAGAGAACCGGATC +
Preference number: 4 (lower is better)
Translates to: KAFAAAMTGKWNGDIFERFLESC*QLENRI
Trigger: GATCCGGTTCTCTAATTGCCAACATGATTCTAGGAA...CCTTTCGAAAATGTCTCCATTCCACTTTCCAGTCATTGCAGCAGCAAAAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CCA 90 bp TCGTTGAGGTTTGACCTGATTTACACATCACACACTATATATCTCCATCTATGCAGAAGAGGTTTACTCTaGGTGGCACAGACCAATTCA +
Preference number: 4 (lower is better)
Translates to: SLRFDLIYTSHTIYLHLCRRGLL*VAQTNS
Trigger: TGAATTGGTCTGTGCCACCCAGAGTAAACCTCTTCT...GCATAGATGGAGATATATAGTGTGTGATGTGTAAATCAGGTCAAACCTCAACGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp AATAGGATTATGAAAAAGGCCGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCACTCACCAGACTTATTaGATAGAACTGCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: NRIMKKAEVKSRVKLRLCTHQTY*IELHGH
Trigger: ATGACCATGCAGTTCTATTCAATAAGTCTGGTGAGT...GCAGAGTCTCAGTTTTACTCTTGACTTGACCTCGGCCTTTTTCATAATCCTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR GCA 90 bp AAAGGAACACATGATTTGAATAGGATTATGAAAAAGGCCGAGGTCAAGTCAAGAGACTGGGAAGTCACCTaGTTTGCTGACATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: KGTHDLNRIMKKAEVKSRDWEVT*FADIKV
Trigger: CACTTTTATGTCAGCAAAGCAGGTGACTTCCCAGTC...TCTTGACTTGACCTCGGCCTTTTTCATAATCCTATTCAAATCATGTGTTCCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CCA 90 bp AATAGGATTATGAAAAAGGCCGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCACATGGTCACCATTATaGCATAGTACCTTATTGGGA +
Preference number: 4 (lower is better)
Translates to: NRIMKKAEVKSRVKLRLCTWSPL*HSTLLG
Trigger: TCCCAATAAGGTACTATGCCATAATGGTGACCATGT...GCAGAGTCTCAGTTTTACTCTTGACTTGACCTCGGCCTTTTTCATAATCCTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CCA 90 bp AAAGGAACACATGATTTGAATAGGATTATGAAAAAGGCCGAGGTCAAGTCAAGAGACGAAACCCGGAAGTaGAAGGGCGTGATTATAAAA +
Preference number: 4 (lower is better)
Translates to: KGTHDLNRIMKKAEVKSRDETRK*KGVIIK
Trigger: TTTTATAATCACGCCCTTCCACTTCCGGGTTTCGTC...TCTTGACTTGACCTCGGCCTTTTTCATAATCCTATTCAAATCATGTGTTCCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CCA 90 bp TTGGATATTTCTAGCACCGTCAATTCTGAGGAACTCTACATATTTCAAAGCAAGTGGCACAGAAATGACTaGCAATCGCAAGTGATACAC +
Preference number: 4 (lower is better)
Translates to: LDISSTVNSEELYIFQSKWHRND*QSQVIH
Trigger: GTGTATCACTTGCGATTGCCAGTCATTTCTGTGCCA...CTTGCTTTGAAATATGTAGAGTTCCTCAGAATTGACGGTGCTAGAAATATCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp TTGGATATTTCTAGCACCGTCAATTCTGAGGAACTCTACATATTTCAAAGCAAGAGAAAACGCTGCAAGTaGAGAAACTGGAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LDISSTVNSEELYIFQSKRKRCK*RNWSEE
Trigger: TTCTTCACTCCAGTTTCTTCACTTGCAGCGTTTTCT...CTTGCTTTGAAATATGTAGAGTTCCTCAGAATTGACGGTGCTAGAAATATCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR TCA 90 bp CAATTCAAATATCCACCATCTTCAGTTACCTTATCTGTTACACTGTCAAGTTGTCAGCTTGGTACACACTaGACACATTTGAGGCTTATG +
Preference number: 4 (lower is better)
Translates to: QFKYPPSSVTLSVTLSSCQLGTH*THLRLM
Trigger: CATAAGCCTCAAATGTGTTCAGTGTGTACCAAGCTG...ACAACTTGACAGTGTAACAGATAAGGTAACTGAAGATGGTGGATATTTGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp CAATTCAAATATCCACCATCTTCAGTTACCTTATCTGTTACACTGTCAAGTTGTCACCACACAAATGCCTaGAATCCATCATTCTCACTC +
Preference number: 4 (lower is better)
Translates to: QFKYPPSSVTLSVTLSSCHHTNA*NPSFSL
Trigger: GAGTGAGAATGATGGATTCCAGGCATTTGTGTGGTG...ACAACTTGACAGTGTAACAGATAAGGTAACTGAAGATGGTGGATATTTGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp GGGAATAACCACTACTGCTCTCTTTGGTTCACAAGAGTCATCTATGCATTTCAACCTGAGCTAACTCATTaGTTTATTATTCCTGACCTA +
Preference number: 4 (lower is better)
Translates to: GNNHYCSLWFTRVIYAFQPELTH*FIIPDL
Trigger: TAGGTCAGGAATAATAAACCAATGAGTTAGCTCAGG...TTGAAATGCATAGATGACTCTTGTGAACCAAAGAGAGCAGTAGTGGTTATTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CCA 90 bp TTGGATATTTCTAGCACCGTCAATTCTGAGGAACTCTACATATTTCAAAGCAAGAGGTTATTTAACACTTaGATATTTCTAGCACCGTCA +
Preference number: 4 (lower is better)
Translates to: LDISSTVNSEELYIFQSKRLFNT*IFLAPS
Trigger: TGACGGTGCTAGAAATATCCAAGTGTTAAATAACCT...CTTGCTTTGAAATATGTAGAGTTCCTCAGAATTGACGGTGCTAGAAATATCCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS CCA 90 bp CTTCGCTGCGCAGCACATCGCACCGTCCTGGAAAGCCGCTCTCACTaGGGGCCGCCGCGGTCTCCCCTTCTCCCGCGGCCAACACCGACG +
Preference number: 5 (lower is better)
Translates to: LRCAAHRTVLESRSH*GPPRSPLLPRPTPT
Trigger: CGTCGGTGTTGGCCGCGGGAGAAGGGGAGACCGCGGCGGCCCCCAGTGAGAGCGGCTTTCCAGGACGGTGCGATGTGCTGCGCAGCGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS GCA 90 bp GCCTGCGAACACCAGGCCCACCGCCAAGGCCGGGCGCATGGCCGGTaGAGGGTTGGGGAAGCAAGCGCACAGAGTAAGCGCCCGCCTGTA +
Preference number: 5 (lower is better)
Translates to: ACEHQAHRQGRAHGR*RVGEASAQSKRPPV
Trigger: TACAGGCGGGCGCTTACTCTGTGCGCTTGCTTCCCCAACCCTGCACCGGCCATGCGCCCGGCCTTGGCGGTGGGCCTGGTGTTCGCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378509.9
ENST00000416907.5
ENST00000470969.2
CDS CCA 90 bp AAGCCGGCCTCCTGCCTCTTCGCTGCGCAGCACATCGCACCGTCCTaGAAAGCCGCTCTCACTGGGGGCCGCCGCGGTCTCCCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: KPASCLFAAQHIAPS*KAALTGGRRGLPFS
Trigger: GGAGAAGGGGAGACCGCGGCGGCCCCCAGTGAGAGCGGCTTTCCAGGACGGTGCGATGTGCTGCGCAGCGAAGAGGCAGGAGGCCGGCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS GCA 90 bp CCGCCTGTACCGCTACCCCAGGAAGCCGGCCTCCTGCCTCTTCGCTaGGCAGCACATCGCACCGTCCTGGAAAGCCGCTCTCACTGGGGG +
Preference number: 5 (lower is better)
Translates to: PPVPLPQEAGLLPLR*AAHRTVLESRSHWG
Trigger: CCCCCAGTGAGAGCGGCTTTCCAGGACGGTGCGATGTGCTGCGCAGCGAAGAGGCAGGAGGCCGGCTTCCTGGGGTAGCGGTACAGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378509.9
ENST00000416907.5
ENST00000470969.2
CDS GCA 90 bp AGAGTAAGCGCCCGCCTGTACCGCTACCCCAGGAAGCCGGCCTCCTaGCTCTTCGCTGCGCAGCACATCGCACCGTCCTGGAAAGCCGCT +
Preference number: 5 (lower is better)
Translates to: RVSARLYRYPRKPAS*LFAAQHIAPSWKAA
Trigger: AGCGGCTTTCCAGGACGGTGCGATGTGCTGCGCAGCGAAGAGGCAGGAGGCCGGCTTCCTGGGGTAGCGGTACAGGCGGGCGCTTACTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378509.9
ENST00000416907.5
ENST00000470969.2
CDS GCA 90 bp ATCCTGGATGCTTCCGGGCCAGGAGCTCTAGGAAGATCACGTTACTaGAGCAGCCTGCGAACACCAGGCCCACCGCCAAGGCCGGGCGCA +
Preference number: 5 (lower is better)
Translates to: ILDASGPGALGRSRY*SSLRTPGPPPRPGA
Trigger: TGCGCCCGGCCTTGGCGGTGGGCCTGGTGTTCGCAGGCTGCTGCAGTAACGTGATCTTCCTAGAGCTCCTGGCCCGGAAGCATCCAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378509.9
ENST00000416907.5
ENST00000470969.2
CDS-3UTR CAA 90 bp AAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGGCCTTATCCTCCCACTaGAGACCCACCCTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: KRWSDLHRVPPSRRHWSTALSSH*RPTLLP
Trigger: GGGCAGAAGGGTGGGTCTCAAGTGGGAGGATAAGGC...CGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp CTCGGCATTAACAAAAGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCATGGCCGGTGCAGGGTaGGGGAAGCAAGCGCACAGA +
Preference number: 5 (lower is better)
Translates to: LGINKSETVVRPSQGPTLMAGAG*GKQAHR
Trigger: TCTGTGCGCTTGCTTCCCCAACCCTGCACCGGCCAT...GAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGTTAATGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CAA 90 bp ACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTACGTAATGAGGCTCACAAATTaGCGTAGGGTCACGACGAGC +
Preference number: 5 (lower is better)
Translates to: TVVRPSQGPTLTTTLVYVMRLTN*RRVTTS
Trigger: GCTCGTCGTGACCCTACGCAAATTTGTGAGCCTCAT...TACGTAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CAA 90 bp GCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTTTTGTGGTCCCTAGGTaGTTCCACACCTCTGTGTAC +
Preference number: 5 (lower is better)
Translates to: AKRWSDLHRVPPSRRHWSFVVPR*FHTSVY
Trigger: GTACACAGAGGTGTGGAACAACCTAGGGACCACAAA...AGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CAA 90 bp AGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCGGAATATCCCCATCCTaGCTGACATCAGAAGAGCAA +
Preference number: 5 (lower is better)
Translates to: SETVVRPSQGPTLTTTLVGISPS*LTSEEQ
Trigger: TTGCTCTTCTGATGTCAGCAAGGATGGGGATATTCC...GACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CAA 90 bp CGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCTAGTATCTCTGGCTCCCTaGCAACTTGCCTCACTTGAT +
Preference number: 5 (lower is better)
Translates to: RNGGQTFTGSHPHDDTGLVSLAP*QLASLD
Trigger: ATCAAGTGAGGCAAGTTGCAAGGGAGCCAGAGATAC...TAGACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp GCCGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCCTCAGAAACTGTCAGGTAATGGCCGGTGCAGGGTaGGGGAAGCAAGCGCACAGA +
Preference number: 5 (lower is better)
Translates to: AEVKSRVKLRLCLRNCQVMAGAG*GKQAHR
Trigger: TCTGTGCGCTTGCTTCCCCAACCCTGCACCGGCCAT...TACCTGACAGTTTCTGAGGCAGAGTCTCAGTTTTACTCTTGACTTGACCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CAA 90 bp AAGATGAGGCTCACAAATTTGCGTAGGGTCACGACGAGCGTGACGGTGAGGGAGCCTGAAGATTTCCTTTaGCACGGCTGGCTCAGCACT +
Preference number: 5 (lower is better)
Translates to: KMRLTNLRRVTTSVTVREPEDFL*HGWLST
Trigger: AGTGCTGAGCCAGCCGTGCAAAAGGAAATCTTCAGG...CTCCCTCACCGTCACGCTCGTCGTGACCCTACGCAAATTTGTGAGCCTCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR CAA 90 bp GCTCTTGCGGTGCTGAGCAGGGCCATCCTGCCGTCACCACTGTGGCCTAGGCAACTATATGTGGTCATCTaGTGCGAGTGTTCTAATCTA +
Preference number: 5 (lower is better)
Translates to: ALAVLSRAILPSPLWPRQLYVVI*CECSNL
Trigger: TAGATTAGAACACTCGCACAAGATGACCACATATAG...TTGCCTAGGCCACAGTGGTGACGGCAGGATGGCCCTGCTCAGCACCGCAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp TTTGTGGTCCCTAGGTTGTTCCACACCTCTGTGTACATTAAGGTCCCAATGAAGATGGCCGGTGCAGGGTaGGGGAAGCAAGCGCACAGA +
Preference number: 5 (lower is better)
Translates to: FVVPRLFHTSVYIKVPMKMAGAG*GKQAHR
Trigger: TCTGTGCGCTTGCTTCCCCAACCCTGCACCGGCCAT...CTTCATTGGGACCTTAATGTACACAGAGGTGTGGAACAACCTAGGGACCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR CAA 90 bp ACGACGAGCGTGACGGTGAGGGAGGCGCATTCTGTGGTGAGGATAAACACACCCTTTGTAGAGAGTCTCTaGGAATATCCCCATCCTTGC +
Preference number: 5 (lower is better)
Translates to: TTSVTVREAHSVVRINTPFVESL*EYPHPC
Trigger: GCAAGGATGGGGATATTCCAAGAGACTCTCTACAAA...GGGTGTGTTTATCCTCACCACAGAATGCGCCTCCCTCACCGTCACGCTCGTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR CAA 90 bp AAGATGAGGCTCACAAATTTGCGTAGGGTCACGACGAGCGTGACGGTGAGGGAGTTTGTGGTCCCTAGGTaGTTCCACACCTCTGTGTAC +
Preference number: 5 (lower is better)
Translates to: KMRLTNLRRVTTSVTVREFVVPR*FHTSVY
Trigger: GTACACAGAGGTGTGGAACAACCTAGGGACCACAAA...CTCCCTCACCGTCACGCTCGTCGTGACCCTACGCAAATTTGTGAGCCTCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS-3UTR CAA 90 bp CTCGGCATTAACAAAAGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCCAGTTCCCAGGGAATTaGGGGCTTTCTGCTTCTATA +
Preference number: 5 (lower is better)
Translates to: LGINKSETVVRPSQGPTLQFPGN*GLSASI
Trigger: TATAGAAGCAGAAAGCCCCAAATTCCCTGGGAACTG...GAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGTTAATGCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp AGATCAGACCAACAGACAGTGATCTCCAGGCATCAGCTTCAGCTGCTACAAGCTATGAGGCTCACAAATTaGCGTAGGGTCACGACGAGC +
Preference number: 5 (lower is better)
Translates to: RSDQQTVISRHQLQLLQAMRLTN*RRVTTS
Trigger: GCTCGTCGTGACCCTACGCAAATTTGTGAGCCTCAT...AGCTTGTAGCAGCTGAAGCTGATGCCTGGAGATCACTGTCTGTTGGTCTGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp AGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCACGACGACACTGGTCAACTTTCAATTGTCGTaGAGGTTTGACCTGATTTAC +
Preference number: 5 (lower is better)
Translates to: SETVVRPSQGPTLTTTLVNFQLS*RFDLIY
Trigger: GTAAATCAGGTCAAACCTCAACGACAATTGAAAGTT...GACCAGTGTCGTCGTGAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp AGATCAGACCAACAGACAGTGATCTCCAGGCATCAGCTTCAGCTGCTACAAGCTCCACTTCCGTGCCCTTaGATCACACACAGACTACAC +
Preference number: 5 (lower is better)
Translates to: RSDQQTVISRHQLQLLQAPLPCP*ITHRLH
Trigger: GTGTAGTCTGTGTGTGATCAAAGGGCACGGAAGTGG...AGCTTGTAGCAGCTGAAGCTGATGCCTGGAGATCACTGTCTGTTGGTCTGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp CTCGGCATTAACAAAAGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCAATGTTTCCCCTTATTaGCTTTCTTGCCAACCCGCT +
Preference number: 5 (lower is better)
Translates to: LGINKSETVVRPSQGPTLNVSPY*LSCQPA
Trigger: AGCGGGTTGGCAAGAAAGCAAATAAGGGGAAACATT...GAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGTTAATGCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp GAGTCATCGGGCAGAGGGGAATCTCCTGGTGGTGAAGCCTTATCCTCCCACTTGTGGCTCCCTTGCAACTaGCCTCACTTGATTAAAATT +
Preference number: 5 (lower is better)
Translates to: ESSGRGESPGGEALSSHLWLPCN*PHLIKI
Trigger: AATTTTAATCAAGTGAGGCAAGTTGCAAGGGAGCCA...CAAGTGGGAGGATAAGGCTTCACCACCAGGAGATTCCCCTCTGCCCGATGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp GAGTCATCGGGCAGAGGGGAATCTCCTGGTGGTGAAGCCTTATCCTCCCACTTGTTCTCAGCCTCCATTTaGAGCTGTAACAGAATAAAC +
Preference number: 5 (lower is better)
Translates to: ESSGRGESPGGEALSSHLFSASI*SCNRIN
Trigger: GTTTATTCTGTTACAGCTCAAAATGGAGGCTGAGAA...CAAGTGGGAGGATAAGGCTTCACCACCAGGAGATTCCCCTCTGCCCGATGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS CCA 90 bp GCAAAAGTCAATGCCCCAATACCTAGTAACCACCACACAAATGCCTaGAATCCATCATTCTCACTCAAGCTGGACTGGGAAGTCACCTGC +
Preference number: 5 (lower is better)
Translates to: AKVNAPIPSNHHTNA*NPSFSLKLDWEVTC
Trigger: GCAGGTGACTTCCCAGTCCAGCTTGAGTGAGAATGATGGATTCCAGGCATTTGTGTGGTGGTTACTAGGTATTGGGGCATTGACTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378509.9
ENST00000416907.5
ENST00000470969.2
CDS-3UTR CAA 90 bp CTCGGCATTAACAAAAGCGAAACGGTGGTCAGACCTTCACAGGGTCCCACCCTCTCCCCACCACATAATTaGTTAGGAAATCCTACTTCT +
Preference number: 5 (lower is better)
Translates to: LGINKSETVVRPSQGPTLSPPHN*LGNPTS
Trigger: AGAAGTAGGATTTCCTAACAAATTATGTGGTGGGGA...GAGGGTGGGACCCTGTGAAGGTCTGACCACCGTTTCGCTTTTGTTAATGCCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp TACATGTGTCAGTCTGAGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTTGTCTGAGGCTCACTTTTaGTGGTCCCTAGGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: YMCQSEQREKSPPEDFLLSEAHF*WSLGCS
Trigger: GGAACAACCTAGGGACCACAAAAAGTGAGCCTCAGA...CAAAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCTCAGACTGACACATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CAA 90 bp GAATACCCACTAATGTCTTGTAGCTGTTCTACGTACTCTCAGCTTTCTACTCCCCCTGAAGATTTCCTTTaGCACGGCTGGCTCAGCACT +
Preference number: 5 (lower is better)
Translates to: EYPLMSCSCSTYSQLSTPPEDFL*HGWLST
Trigger: AGTGCTGAGCCAGCCGTGCAAAAGGAAATCTTCAGG...GGGAGTAGAAAGCTGAGAGTACGTAGAACAGCTACAAGACATTAGTGGGTATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp GAATACCCACTAATGTCTTGTAGCTGTTCTACGTACTCTCAGCTTTCTACTCCCGGTGTCTCGGTTTACTaGGCCACTCCTGGTGATAGT +
Preference number: 5 (lower is better)
Translates to: EYPLMSCSCSTYSQLSTPGVSVY*ATPGDS
Trigger: ACTATCACCAGGAGTGGCCAAGTAAACCGAGACACC...GGGAGTAGAAAGCTGAGAGTACGTAGAACAGCTACAAGACATTAGTGGGTATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp CCAAAACGCTGGAGGAAGTCCAGCCCTGCTGTTACTGGTGTCTCGGTTTACTTGTCCTCCTATTCAAGATaGTCCAGTGAAAGGAAAACT +
Preference number: 5 (lower is better)
Translates to: PKRWRKSSPAVTGVSVYLSSYSR*SSERKT
Trigger: AGTTTTCCTTTCACTGGACAATCTTGAATAGGAGGA...CAAGTAAACCGAGACACCAGTAACAGCAGGGCTGGACTTCCTCCAGCGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp GGTTTACTCTGGGTGGCACAGACCAATTCAGCTTTCATGGTCTTCCTCCGTAGCCTATTAGGGATCTTCTaGCACTTTCTTCCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: GLLWVAQTNSAFMVFLRSLLGIF*HFLPEH
Trigger: ATGCTCAGGAAGAAAGTGCAAGAAGATCCCTAATAG...GCTACGGAGGAAGACCATGAAAGCTGAATTGGTCTGTGCCACCCAGAGTAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp GGTTTACTCTGGGTGGCACAGACCAATTCAGCTTTCATGGTCTTCCTCCGTAGCATTCCTAGAATCATGTaGGCAATTAGAGAACCGGAT +
Preference number: 5 (lower is better)
Translates to: GLLWVAQTNSAFMVFLRSIPRIM*AIREPD
Trigger: ATCCGGTTCTCTAATTGCCAACATGATTCTAGGAAT...GCTACGGAGGAAGACCATGAAAGCTGAATTGGTCTGTGCCACCCAGAGTAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp TACATGTGTCAGTCTGAGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTTGGGAATATCCCCATCCTaGCTGACATCAGAAGAGCAA +
Preference number: 5 (lower is better)
Translates to: YMCQSEQREKSPPEDFLLGISPS*LTSEEQ
Trigger: TTGCTCTTCTGATGTCAGCAAGGATGGGGATATTCC...CAAAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCTCAGACTGACACATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378509.9
ENST00000416907.5
CDS-3UTR CAA 90 bp AAAGGCCGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCCTCAGAAACTGTCAGGAATATCCCCATCCTaGCTGACATCAGAAGAGCAA +
Preference number: 5 (lower is better)
Translates to: KGRGQVKSKTETLPQKLSGISPS*LTSEEQ
Trigger: TTGCTCTTCTGATGTCAGCAAGGATGGGGATATTCC...TGACAGTTTCTGAGGCAGAGTCTCAGTTTTACTCTTGACTTGACCTCGGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CAA 90 bp TTCCCAGGGAATTTGGGGCTTTCTGCTTCTATATGTGGTCATCTTGTGCGAGTGTTTGTAGAGAGTCTCTaGGAATATCCCCATCCTTGC +
Preference number: 5 (lower is better)
Translates to: FPGNLGLSASICGHLVRVFVESL*EYPHPC
Trigger: GCAAGGATGGGGATATTCCAAGAGACTCTCTACAAA...CACTCGCACAAGATGACCACATATAGAAGCAGAAAGCCCCAAATTCCCTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp AGATCAGACCAACAGACAGTGATCTCCAGGCATCAGCTTCAGCTGCTACAAGCTACACACACACAGTCTTaGTCTATAGGCAAACAGAGA +
Preference number: 5 (lower is better)
Translates to: RSDQQTVISRHQLQLLQATHTQS*SIGKQR
Trigger: TCTCTGTTTGCCTATAGACAAAGACTGTGTGTGTGT...AGCTTGTAGCAGCTGAAGCTGATGCCTGGAGATCACTGTCTGTTGGTCTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp AGTTCTCCTCCATGTGCATTTCTCTGTCCGTTTAGGTCAATGCCAACTGGTCCAACAAAGGCATTTTTATaGCGCCGGGGAATAACCACT +
Preference number: 5 (lower is better)
Translates to: SSPPCAFLCPFRSMPTGPTKAFL*RRGITT
Trigger: AGTGGTTATTCCCCGGCGCAATAAAAATGCCTTTGT...TGGACCAGTTGGCATTGACCTAAACGGACAGAGAAATGCACATGGAGGAGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp AGATCAGACCAACAGACAGTGATCTCCAGGCATCAGCTTCAGCTGCTACAAGCTGCTGGAAGCCGATGTTaGATATTTACACAGCTCAAA +
Preference number: 5 (lower is better)
Translates to: RSDQQTVISRHQLQLLQAAGSRC*IFTQLK
Trigger: TTTGAGCTGTGTAAATATCAAACATCGGCTTCCAGC...AGCTTGTAGCAGCTGAAGCTGATGCCTGGAGATCACTGTCTGTTGGTCTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp GCCGGTGAGTTCAGCTGCTTACAGAGGAGCATGTACTGGTATGTAAGGTTCCAGAATAACAACTTTCAATaGTCGTTGAGGTTTGACCTG +
Preference number: 5 (lower is better)
Translates to: AGEFSCLQRSMYWYVRFQNNNFQ*SLRFDL
Trigger: CAGGTCAAACCTCAACGACAATTGAAAGTTGTTATT...CTGGAACCTTACATACCAGTACATGCTCCTCTGTAAGCAGCTGAACTCACCGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp TACATGTGTCAGTCTGAGCAACGTGAGAAGTCCCCTCCTGAAGATTTCCTTTTGCCTCCTCCCCCATCTTaGTTCTTAAAACCTAATGGT +
Preference number: 5 (lower is better)
Translates to: YMCQSEQREKSPPEDFLLPPPPS*FLKPNG
Trigger: ACCATTAGGTTTTAAGAACAAAGATGGGGGAGGAGG...CAAAAGGAAATCTTCAGGAGGGGACTTCTCACGTTGCTCAGACTGACACATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp CGAGGTCAAGTCAAGAGTAAAACTGAGACTCTGCCTCAGAAACTGTCAGGTAATTTTGTAGAGAGTCTCTaGGAATATCCCCATCCTTGC +
Preference number: 5 (lower is better)
Translates to: RGQVKSKTETLPQKLSGNFVESL*EYPHPC
Trigger: GCAAGGATGGGGATATTCCAAGAGACTCTCTACAAA...ATTACCTGACAGTTTCTGAGGCAGAGTCTCAGTTTTACTCTTGACTTGACCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CAA 90 bp GAATACCCACTAATGTCTTGTAGCTGTTCTACGTACTCTCAGCTTTCTACTCCCCCACTACTGCTCTCTTaGGTTCACAAGAGTCATCTA +
Preference number: 5 (lower is better)
Translates to: EYPLMSCSCSTYSQLSTPPLLLS*VHKSHL
Trigger: TAGATGACTCTTGTGAACCAAAGAGAGCAGTAGTGG...GGGAGTAGAAAGCTGAGAGTACGTAGAACAGCTACAAGACATTAGTGGGTATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp CAATTCAAATATCCACCATCTTCAGTTACCTTATCTGTTACACTGTCAAGTTGTGGAGTCCCACTAGTCTaGCTGCACTGTCACTGGGAA +
Preference number: 5 (lower is better)
Translates to: QFKYPPSSVTLSVTLSSCGVPLV*LHCHWE
Trigger: TTCCCAGTGACAGTGCAGCAAGACTAGTGGGACTCC...ACAACTTGACAGTGTAACAGATAAGGTAACTGAAGATGGTGGATATTTGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp TTGGATATTTCTAGCACCGTCAATTCTGAGGAACTCTACATATTTCAAAGCAAGTCTGAGGCTCACTTTTaGTGGTCCCTAGGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: LDISSTVNSEELYIFQSKSEAHF*WSLGCS
Trigger: GGAACAACCTAGGGACCACAAAAAGTGAGCCTCAGA...CTTGCTTTGAAATATGTAGAGTTCCTCAGAATTGACGGTGCTAGAAATATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp TCGTTGAGGTTTGACCTGATTTACACATCACACACTATATATCTCCATCTATGCTGTTACACTGTCAAGTaGTTCAGCAGGCACACAGGT +
Preference number: 5 (lower is better)
Translates to: SLRFDLIYTSHTIYLHLCCYTVK*FSRHTG
Trigger: ACCTGTGTGCCTGCTGAACAACTTGACAGTGTAACA...GCATAGATGGAGATATATAGTGTGTGATGTGTAAATCAGGTCAAACCTCAACGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS-3UTR CAA 90 bp AAAGCTTTTGCTGCTGCAATGACTGGAAAGTGGAATGGAGACATTTTCGAAAGGATTCCTAGAATCATGTaGGCAATTAGAGAACCGGAT +
Preference number: 5 (lower is better)
Translates to: KAFAAAMTGKWNGDIFERIPRIM*AIREPD
Trigger: ATCCGGTTCTCTAATTGCCAACATGATTCTAGGAAT...CCTTTCGAAAATGTCTCCATTCCACTTTCCAGTCATTGCAGCAGCAAAAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS-3UTR CAA 90 bp TTGGATATTTCTAGCACCGTCAATTCTGAGGAACTCTACATATTTCAAAGCAAGGTCTCCCATTCCAGCTaGGTACACACTGAACACATT +
Preference number: 5 (lower is better)
Translates to: LDISSTVNSEELYIFQSKVSHSS*VHTEHI
Trigger: AATGTGTTCAGTGTGTACCAAGCTGGAATGGGAGAC...CTTGCTTTGAAATATGTAGAGTTCCTCAGAATTGACGGTGCTAGAAATATCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378509.9
CDS CAA 72 bp CCCACCGCCAAGGCCGGGCGCATGGCCGGTGCAGGGTaGGGGAAGCAAGCGCACAGAGTAAGCGCCCGCCTG +
Preference number: 6 (lower is better)
Translates to: PTAKAGRMAGAG*GKQAHRVSARL
Trigger: CAGGCGGGCGCTTACTCTGTGCGCTTGCTTCCCCAACCCTGCACCGGCCATGCGCCCGGCCTTGGCGGTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378509.9
ENST00000416907.5
ENST00000470969.2
CDS GCA 72 bp GCCCGCCTGTACCGCTACCCCAGGAAGCCGGCCTCCTaGCTCTTCGCTGCGCAGCACATCGCACCGTCCTGG +
Preference number: 6 (lower is better)
Translates to: ARLYRYPRKPAS*LFAAQHIAPSW
Trigger: CCAGGACGGTGCGATGTGCTGCGCAGCGAAGAGGCAGGAGGCCGGCTTCCTGGGGTAGCGGTACAGGCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378509.9
ENST00000416907.5
ENST00000470969.2
CDS CCA 72 bp CTGCGAACACCAGGCCCACCGCCAAGGCCGGGCGCATaGCCGGTGCAGGGTTGGGGAAGCAAGCGCACAGAG +
Preference number: 6 (lower is better)
Translates to: LRTPGPPPRPGA*PVQGWGSKRTE
Trigger: CTCTGTGCGCTTGCTTCCCCAACCCTGCACCGGCCATGCGCCCGGCCTTGGCGGTGGGCCTGGTGTTCGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378509.9
ENST00000416907.5
ENST00000470969.2
CDS CAA 90 bp AACACCAGGCCCACCGCCAAGGCCGGGCGCATGGCCGGTGCAGGGTaGGGGAAGCAAGCGCACAGAGTAAGCGCCCGCCTGTACCGCTAC +
Preference number: 6 (lower is better)
Translates to: NTRPTAKAGRMAGAG*GKQAHRVSARLYRY
Trigger: GTAGCGGTACAGGCGGGCGCTTACTCTGTGCGCTTGCTTCCCCAACCCTGCACCGGCCATGCGCCCGGCCTTGGCGGTGGGCCTGGTGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378509.9
ENST00000416907.5
ENST00000470969.2
CDS CCA 72 bp TCCTGCCTCTTCGCTGCGCAGCACATCGCACCGTCCTaGAAAGCCGCTCTCACTGGGGGCCGCCGCGGTCTC +
Preference number: 6 (lower is better)
Translates to: SCLFAAQHIAPS*KAALTGGRRGL
Trigger: GAGACCGCGGCGGCCCCCAGTGAGAGCGGCTTTCCAGGACGGTGCGATGTGCTGCGCAGCGAAGAGGCAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378509.9
ENST00000416907.5
ENST00000470969.2
CDS GCA 72 bp CCGCTACCCCAGGAAGCCGGCCTCCTGCCTCTTCGCTaGGCAGCACATCGCACCGTCCTGGAAAGCCGCTCT +
Preference number: 6 (lower is better)
Translates to: PLPQEAGLLPLR*AAHRTVLESRS
Trigger: AGAGCGGCTTTCCAGGACGGTGCGATGTGCTGCGCAGCGAAGAGGCAGGAGGCCGGCTTCCTGGGGTAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378509.9
ENST00000416907.5
ENST00000470969.2
CDS GCA 72 bp GCTTCCGGGCCAGGAGCTCTAGGAAGATCACGTTACTaGAGCAGCCTGCGAACACCAGGCCCACCGCCAAGG +
Preference number: 6 (lower is better)
Translates to: ASGPGALGRSRY*SSLRTPGPPPR
Trigger: CCTTGGCGGTGGGCCTGGTGTTCGCAGGCTGCTGCAGTAACGTGATCTTCCTAGAGCTCCTGGCCCGGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378509.9
ENST00000416907.5
ENST00000470969.2
CDS GCA 72 bp AAGGTCCCAATGAAGACAAACAAGGTGCCCAGCCAGTaGCACAGGGTGAAGGGGTTCTGGAGGAGTGGAGTC +
Preference number: 6 (lower is better)
Translates to: KVPMKTNKVPSQ*HRVKGFWRSGV
Trigger: GACTCCACTCCTCCAGAACCCCTTCACCCTGTGGCACTGGCTGGGCACCTTGTTTGTCTTCATTGGGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466599.1
CDS CCA 72 bp GGTCACCATTATGGCATAGTACCTTATTGGGATAGCTaGTGGCTTCCTTCCCAAATCAGCTTCAAAGAGGAA +
Preference number: 6 (lower is better)
Translates to: GHHYGIVPYWDS*WLPSQISFKEE
Trigger: TTCCTCTTTGAAGCTGATTTGGGAAGGAAGCCACCAGCTATCCCAATAAGGTACTATGCCATAATGGTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378509.9
ENST00000416907.5
ENST00000470969.2
CDS GCA 72 bp AAGGCCGAGGTCAAGTCAAGAGTAAAACTGAGACTCTaGCTCAGAAACTGTCAGGTAATTCTACTGTCTAAC +
Preference number: 6 (lower is better)
Translates to: KAEVKSRVKLRL*LRNCQVILLSN
Trigger: GTTAGACAGTAGAATTACCTGACAGTTTCTGAGGCAGAGTCTCAGTTTTACTCTTGACTTGACCTCGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470969.2
CDS TCA 72 bp ATATCCCCACAGACACCAGGGCAATGGAGGTATATTTaGATATACTGTATGGATCTAAATATCATATGCAGG +
Preference number: 6 (lower is better)
Translates to: ISPQTPGQWRYI*IYCMDLNIICR
Trigger: CCTGCATATGATATTTAGATCCATACAGTATATTCAAATATACCTCCATTGCCCTGGTGTCTGTGGGGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5
CDS CAA 72 bp AATATCCCCACAGACACCAGGGCAATGGAGGTATATTaGAATATACTGTATGGATCTAAATATCATATGCAG +
Preference number: 6 (lower is better)
Translates to: NIPTDTRAMEVY*NILYGSKYHMQ
Trigger: CTGCATATGATATTTAGATCCATACAGTATATTCAAATATACCTCCATTGCCCTGGTGTCTGTGGGGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416907.5