RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC26A7 (Homo sapiens)

Ensembl gene IDs: ENSG00000147606

Ensembl transcript IDs: ENST00000276609.8, ENST00000309536.6, ENST00000520818.5, ENST00000522181.5, ENST00000522862.5, ENST00000523719.5, ENST00000617078.3, ENST00000617233.2

Found 574 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTTTACCTCCAATTATTACTTCTGCTTTTCCTTGGAAGAGTGTTTaGTGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTAGT +
Preference number: 1 (lower is better)
Translates to: TLPPIITSAFPWKSV*WECELASLISIQVS
Trigger: ACTAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAAAAGCAGAAGTAATAATTGGAGGTAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR TCA 90 bp CAAGCCACCTGTGTCTTCGCTCCTGTGCTGTACAGGCCAGCCGTCCTTCCCATGCTCCGAAAGCTTCAGTaGTCACCGCAGAGAGGATGT +
Preference number: 2 (lower is better)
Translates to: QATCVFAPVLYRPAVLPMLRKLQ*SPQRGC
Trigger: ACATCCTCTCTGCGGTGATCACTGAAGCTTTCGGAG...CATGGGAAGGACGGCTGGCCTGTACAGCACAGGAGCGAAGACACAGGTGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR CCA 90 bp GTCTTCGCTCCTGTGCTGTACAGGCCAGCCGTCCTTCCCATGGCAGCAGCACTTATATTGCTGAGGCCATaGGCCAAAAATTCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: VFAPVLYRPAVLPMAAALILLRP*AKNSWL
Trigger: CAACCAGGAATTTTTGGCCCATGGCCTCAGCAATAT...AAGTGCTGCTGCCATGGGAAGGACGGCTGGCCTGTACAGCACAGGAGCGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR GCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTGTGTCTTCGCTCCTGTaGTGTACAGGCCAGCCGTCC +
Preference number: 2 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCVSSLL*CTGQPS
Trigger: GGACGGCTGGCCTGTACAGCACAGGAGCGAAGACAC...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR TCA 90 bp AGCATTCCCTTCAGTCCCACAACAATAATGCTTGCAAGGACACACATGGGCAGCTTTTTGGCAGATCCTTaGGCAAGAGCCAGTGAGGCC +
Preference number: 2 (lower is better)
Translates to: SIPFSPTTIMLARTHMGSFLADP*ARASEA
Trigger: GGCCTCACTGGCTCTTGCTCAAGGATCTGCCAAAAA...GCTGCCCATGTGTGTCCTTGCAAGCATTATTGTTGTGGGACTGAAGGGAATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR CCA 90 bp GCATTCAGGAAAACAAGCGGGTTGTTTATTGAGATAATTTTCACCTGCTGCAGGCAGCCGTCCTTCCCATaGCAGCAGCACTTGGTATGC +
Preference number: 2 (lower is better)
Translates to: AFRKTSGLFIEIIFTCCRQPSFP*QQHLVC
Trigger: GCATACCAAGTGCTGCTGCCATGGGAAGGACGGCTG...CCTGCAGCAGGTGAAAATTATCTCAATAAACAACCCGCTTGTTTTCCTGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR TCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCCTTGGAAGAGTGTTTaGTGGGAATGTGAGTTGGCC +
Preference number: 2 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSPWKSV*WECELA
Trigger: GGCCAACTCACATTCCCATCAAACACTCTTCCAAGG...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR TCA 90 bp CTTGGGAAGCGTCCTATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTTTGAGCAAGAGCCAGTaGGGCCACATAGCCTACAAG +
Preference number: 2 (lower is better)
Translates to: LGKRPITIAMVQTTPNSSLSKSQ*GHIAYK
Trigger: CTTGTAGGCTATGTGGCCTCACTGGCTCTTGCTCAA...ACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGATAGGACGCTTCCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR GCA 90 bp AGCATTCCCTTCAGTCCCACAACAATAATGCTTGCAAGGACACACATGGGCAGCGCAGTTCTTTCCAACTaGTATGCAGTTACTAAGTCA +
Preference number: 2 (lower is better)
Translates to: SIPFSPTTIMLARTHMGSAVLSN*YAVTKS
Trigger: TGACTTAGTAACTGCATAGCAGTTGGAAAGAACTGC...GCTGCCCATGTGTGTCCTTGCAAGCATTATTGTTGTGGGACTGAAGGGAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR GCA 90 bp GCGTCCTATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTCCCACATTCACATAGCCTACAAGTaGCACTCCGAAAGCTTCAGT +
Preference number: 2 (lower is better)
Translates to: ASYHYSYGTNNTKQQSHIHIAYK*HSESFS
Trigger: ACTGAAGCTTTCGGAGTGGCACTTGTAGGCTATGTG...AATGTGGGACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGATAGGACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR CCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCCAAAATGCCAGCATATaGCCTCTTCAGGCAGTTGGT +
Preference number: 2 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSQNASI*PLQAVG
Trigger: ACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR TCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCCTACCAGTGACCAATaGATTAGAGATGGTGAATAT +
Preference number: 2 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSPTSDQ*IRDGEY
Trigger: ATATTCACCATCTCTAATTCATTGGTCACTGGTAGG...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR CCA 90 bp ATTTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCCAAAATGCCAGCATATaGCCTCTTCAGGCAGTTGGT +
Preference number: 2 (lower is better)
Translates to: IFTCCRVSLSISVFTLNSQNASI*PLQAVG
Trigger: ACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG...GGAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR CCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCCAACAAAGCTTCAGTaGAAAACAGAGCCTCTTATT +
Preference number: 2 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSPTKLQ*KTEPLI
Trigger: AATAAGAGGCTCTGTTTTCCACTGAAGCTTTGTTGG...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR CAA 90 bp AACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTaGGTGTGTGGAAGTCTTAAAACAAAGGTCTTCATAAGGTACATG +
Preference number: 2 (lower is better)
Translates to: NSIPETSSRLTVIVA*VCGSLKTKVFIRYM
Trigger: CATGTACCTTATGAAGACCTTTGTTTTAAGACTTCCACACACCAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR TCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACTTTGTTCACACTTGCTaGTATCATCAAGTGGCTGAT +
Preference number: 2 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDFVHTC*YHQVAD
Trigger: ATCAGCCACTTGATGATATCAGCAAGTGTGAACAAA...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR GCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAAAGTTGTGCAAAATaGCAGCATATGGCCTCTTCA +
Preference number: 2 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSKSCAK*QHMASS
Trigger: TGAAGAGGCCATATGCTGGCATTTTGCACAACTTTT...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR CCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCCCAACAAAGCTTCAGTaGAAAACAGAGCCTCTTATT +
Preference number: 2 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSPTKLQ*KTEPLI
Trigger: AATAAGAGGCTCTGTTTTCCACTGAAGCTTTGTTGG...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR GCA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTAGCAGTTCTTTCCAACTaGTATGCAGTTACTAAGTCA +
Preference number: 2 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLAVLSN*YAVTKS
Trigger: TGACTTAGTAACTGCATAGCAGTTGGAAAGAACTGC...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR GCA 90 bp AATTTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCACAACAATAATGCTTaGAAGGACACACATGGGCAG +
Preference number: 2 (lower is better)
Translates to: NFHLLQGFTVHFCLHFKFHNNNA*KDTHGQ
Trigger: CTGCCCATGTGTGTCCTTGCAAGCATTATTGTTGTG...GAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR CCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACCCAATGTCAAGAACTTaGTTTTATTTGGATACCCGT +
Preference number: 2 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDPMSRT*FYLDTR
Trigger: ACGGGTATCCAAATAAAACCAAGTTCTTGACATTGG...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR CCA 90 bp ATTTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCTACAGTCATTGCTCTTaGGAAGCGTCCTATCACTAT +
Preference number: 2 (lower is better)
Translates to: IFTCCRVSLSISVFTLNSYSHCS*EASYHY
Trigger: ATAGTGATAGGACGCTTCCCAAGAGCAATGACTGTA...GGAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR CAA 90 bp GTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTaGGTGGGTTTGAAGATAATCACATCAAGCTCTCCTCTAACAAAA +
Preference number: 2 (lower is better)
Translates to: VQPSLWRLFVNYPVG*VGLKIITSSSPLTK
Trigger: TTTTGTTAGAGGAGAGCTTGATGTGATTATCTTCAAACCCACCAAACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR GCA 90 bp CTTGTGTGTCTAAACTCATGTTTAGCTCTTAAGCTCTCAGAACTCCATACCAGAGCAGTTCTTTCCAACTaGTATGCAGTTACTAAGTCA +
Preference number: 2 (lower is better)
Translates to: LVCLNSCLALKLSELHTRAVLSN*YAVTKS
Trigger: TGACTTAGTAACTGCATAGCAGTTGGAAAGAACTGC...TCTGGTATGGAGTTCTGAGAGCTTAAGAGCTAAACATGAGTTTAGACACACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR CCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACGAACTTGGTTTTATTTaGATACCCGTTTCTTTCGAT +
Preference number: 2 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDELGFI*IPVSFD
Trigger: ATCGAAAGAAACGGGTATCCAAATAAAACCAAGTTC...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276609.8
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR GCA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTAAAAGTTGTGCAAAATaGCAGCATATGGCCTCTTCA +
Preference number: 2 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVKSCAK*QHMASS
Trigger: TGAAGAGGCCATATGCTGGCATTTTGCACAACTTTT...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR GCA 90 bp TTTATCAAGGAAGCTGTACAATGGGCTAACAATACATCCACACTCCTGCCTTTAAAGCAAAGGTCCTATTaGATAGATGACTATAAGGAC +
Preference number: 2 (lower is better)
Translates to: FIKEAVQWANNTSTLLPLKQRSY*IDDYKD
Trigger: GTCCTTATAGTCATCTATGCAATAGGACCTTTGCTT...TAAAGGCAGGAGTGTGGATGTATTGTTAGCCCATTGTACAGCTTCCTTGATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR CCA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTACAGTTCATCTTATACTaGAATAGCACAAAGCTATTC +
Preference number: 2 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLQFILY*NSTKLF
Trigger: GAATAGCTTTGTGCTATTCCAGTATAAGATGAACTG...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR CCA 90 bp CTTGTGTGTCTAAACTCATGTTTAGCTCTTAAGCTCTCAGAACTCCATACCAGAGTTCAGCCTAGCCTATaGCGTTTATTTGTCAATTAT +
Preference number: 2 (lower is better)
Translates to: LVCLNSCLALKLSELHTRVQPSL*RLFVNY
Trigger: ATAATTGACAAATAAACGCCATAGGCTAGGCTGAAC...TCTGGTATGGAGTTCTGAGAGCTTAAGAGCTAAACATGAGTTTAGACACACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR CAA 90 bp ATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTCCCACATaGGCAGCAAAGCATATTGTAAATACATATGTACTGACCCATATT +
Preference number: 2 (lower is better)
Translates to: ITIAMVQTTPNSSPT*AAKHIVNTYVLTHI
Trigger: AATATGGGTCAGTACATATGTATTTACAATATGCTTTGCTGCCAATGTGGGACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR CCA 90 bp CTTGTGTGTCTAAACTCATGTTTAGCTCTTAAGCTCTCAGAACTCCATACCAGAGAACTTGGTTTTATTTaGATACCCGTTTCTTTCGAT +
Preference number: 2 (lower is better)
Translates to: LVCLNSCLALKLSELHTRELGFI*IPVSFD
Trigger: ATCGAAAGAAACGGGTATCCAAATAAAACCAAGTTC...TCTGGTATGGAGTTCTGAGAGCTTAAGAGCTAAACATGAGTTTAGACACACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR CCA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTGAACTTGGTTTTATTTaGATACCCGTTTCTTTCGAT +
Preference number: 2 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVELGFI*IPVSFD
Trigger: ATCGAAAGAAACGGGTATCCAAATAAAACCAAGTTC...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR CCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTCCAATGTCAAGAACTTaGTTTTATTTGGATACCCGT +
Preference number: 2 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLPMSRT*FYLDTR
Trigger: ACGGGTATCCAAATAAAACCAAGTTCTTGACATTGG...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR CCA 90 bp AGTTCATCTTATACTGGAATAGCACAAAGCTATTCTGCTAGTGGTATTTTCTCACCAACAAAGCTTCAGTaGAAAACAGAGCCTCTTATT +
Preference number: 2 (lower is better)
Translates to: SSSYTGIAQSYSASGIFSPTKLQ*KTEPLI
Trigger: AATAAGAGGCTCTGTTTTCCACTGAAGCTTTGTTGG...TGAGAAAATACCACTAGCAGAATAGCTTTGTGCTATTCCAGTATAAGATGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR CCA 90 bp AGTTCATCTTATACTGGAATAGCACAAAGCTATTCTGCTAGTGGTATTTTCTCACCAATGTCAAGAACTTaGTTTTATTTGGATACCCGT +
Preference number: 2 (lower is better)
Translates to: SSSYTGIAQSYSASGIFSPMSRT*FYLDTR
Trigger: ACGGGTATCCAAATAAAACCAAGTTCTTGACATTGG...TGAGAAAATACCACTAGCAGAATAGCTTTGTGCTATTCCAGTATAAGATGAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR GCA 72 bp AAGATATTAGACAAGCCACCTGTGTCTTCGCTCCTGTaGTGTACAGGCCAGCCGTCCTTCCCATGGCAGCAG +
Preference number: 3 (lower is better)
Translates to: KILDKPPVSSLL*CTGQPSFPWQQ
Trigger: CTGCTGCCATGGGAAGGACGGCTGGCCTGTACAGCACAGGAGCGAAGACACAGGTGGCTTGTCTAATATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR CCA 72 bp TCGCTCCTGTGCTGTACAGGCCAGCCGTCCTTCCCATaGCAGCAGCACTTGGTATGCAGAAGAAAAATGAAG +
Preference number: 3 (lower is better)
Translates to: SLLCCTGQPSFP*QQHLVCRRKMK
Trigger: CTTCATTTTTCTTCTGCATACCAAGTGCTGCTGCCATGGGAAGGACGGCTGGCCTGTACAGCACAGGAGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR CAA 90 bp CTTGGGAAGCGTCCTATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTGGCCTCTTCAGGCAGTaGGTAAAGACAAGAGCTGTA +
Preference number: 3 (lower is better)
Translates to: LGKRPITIAMVQTTPNSSGLFRQ*VKTRAV
Trigger: TACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCC...ACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGATAGGACGCTTCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR CAA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCGGCCTCTTCAGGCAGTaGGTAAAGACAAGAGCTGTA +
Preference number: 3 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSGLFRQ*VKTRAV
Trigger: TACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCC...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR CAA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACTGTGAAGCTTCTTCATaGCAGTTGCCATTGGATAGG +
Preference number: 3 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDCEASS*QLPLDR
Trigger: CCTATCCAATGGCAACTGCAATGAAGAAGCTTCACA...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR CAA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGTTAAAATTAGAGCTATaGGGTCTGAAGATCCTAAGC +
Preference number: 3 (lower is better)
Translates to: SQNSIPETSSRLTVIVALLKLEL*GLKILS
Trigger: GCTTAGGATCTTCAGACCCAATAGCTCTAATTTTAA...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR GCA 72 bp GACACACATGGGCAGCCAGTAAAGCAAAGGTCCTATTaGATAGATGACTATAAGGACGAAAATGCAAGATAT +
Preference number: 3 (lower is better)
Translates to: DTHGQPVKQRSY*IDDYKDENARY
Trigger: ATATCTTGCATTTTCGTCCTTATAGTCATCTATGCAATAGGACCTTTGCTTTACTGGCTGCCCATGTGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
3UTR-3UTR CAA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTAAGAACTTGGTTTTATTaGGATACCCGTTTCTTTCGA +
Preference number: 3 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLRTWFY*DTRFFR
Trigger: TCGAAAGAAACGGGTATCCAAATAAAACCAAGTTCT...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR CCA 72 bp CTTTTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTaGCCTCACTCATTTCAATCCAAGTTAGTGATAAAG +
Preference number: 3 (lower is better)
Translates to: LFLGRVFDGNVS*PHSFQSKLVIK
Trigger: CTTTATCACTAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR CCA 72 bp TCCAACAAAGCTTCAGTGGAAAACAGAGCCTCTTATTaGGTAGAAATGTTAAAATTAGAGCTATTGGGTCTG +
Preference number: 3 (lower is better)
Translates to: SNKASVENRASY*VEMLKLELLGL
Trigger: CAGACCCAATAGCTCTAATTTTAACATTTCTACCCAATAAGAGGCTCTGTTTTCCACTGAAGCTTTGTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR-3UTR CAA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTAGAACTTGGTTTTATTaGGATACCCGTTTCTTTCGA +
Preference number: 3 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVRTWFY*DTRFFR
Trigger: TCGAAAGAAACGGGTATCCAAATAAAACCAAGTTCT...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR GCA 72 bp CATCACTTGGCAGGCACTAGAATTTACTTTTATAGATaGCAGAGAAAGCACCTAAATGGCTGGTATTTTAAT +
Preference number: 3 (lower is better)
Translates to: HHLAGTRIYFYR*QRKHLNGWYFN
Trigger: ATTAAAATACCAGCCATTTAGGTGCTTTCTCTGGCATCTATAAAAGTAAATTCTAGTGCCTGCCAAGTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GTCTTCGCTCCTGTGCTGTACAGGCCAGCCGTCCTTCCCATGGCAGCAGCACTTTGTTACTCTGTGTGGTaGGATTCTGCATGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: VFAPVLYRPAVLPMAAALCYSVW*DSACSE
Trigger: CTCAGAACATGCAGAATCTCACCACACAGAGTAACA...AAGTGCTGCTGCCATGGGAAGGACGGCTGGCCTGTACAGCACAGGAGCGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR GCA 90 bp CAAGCCACCTGTGTCTTCGCTCCTGTGCTGTACAGGCCAGCCGTCCTTCCCATGGTGAAGCTTCTTCATTaGAGTTGCCATTGGATAGGG +
Preference number: 4 (lower is better)
Translates to: QATCVFAPVLYRPAVLPMVKLLH*SCHWIG
Trigger: CCCTATCCAATGGCAACTGCAATGAAGAAGCTTCAC...CATGGGAAGGACGGCTGGCCTGTACAGCACAGGAGCGAAGACACAGGTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp CAAGCCACCTGTGTCTTCGCTCCTGTGCTGTACAGGCCAGCCGTCCTTCCCATGCCCAGACACAGTGTCTaGAAGCAAGTTTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: QATCVFAPVLYRPAVLPMPRHSV*KQVFFQ
Trigger: CTGAAAGAAAACTTGCTTCCAGACACTGTGTCTGGG...CATGGGAAGGACGGCTGGCCTGTACAGCACAGGAGCGAAGACACAGGTGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR TCA 90 bp CAAGCCACCTGTGTCTTCGCTCCTGTGCTGTACAGGCCAGCCGTCCTTCCCATGTCTCTGTTCTACACCTaGGCAATTCCAAAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: QATCVFAPVLYRPAVLPMSLFYT*AIPKRL
Trigger: TAACCTCTTTGGAATTGCTCAGGTGTAGAACAGAGA...CATGGGAAGGACGGCTGGCCTGTACAGCACAGGAGCGAAGACACAGGTGGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR TCA 90 bp GTCTTCGCTCCTGTGCTGTACAGGCCAGCCGTCCTTCCCATGGCAGCAGCACTTAAGAAACTATATTGCTaGGGCCATGGGCCAAAAATT +
Preference number: 4 (lower is better)
Translates to: VFAPVLYRPAVLPMAAALKKLYC*GHGPKI
Trigger: AATTTTTGGCCCATGGCCTCAGCAATATAGTTTCTT...AAGTGCTGCTGCCATGGGAAGGACGGCTGGCCTGTACAGCACAGGAGCGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR GCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTGTGGCACTGCCCAGTTaGAGCACAAACATGGCCACC +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCVALPS*STNMAT
Trigger: GGTGGCCATGTTTGTGCTGCAACTGGGCAGTGCCAC...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGGTGTCTTCGCTCCTGTaGTGTACAGGCCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLVSSLL*CTGQPS
Trigger: GGACGGCTGGCCTGTACAGCACAGGAGCGAAGACAC...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GTCTTCGCTCCTGTGCTGTACAGGCCAGCCGTCCTTCCCATGGCAGCAGCACTTATAATTTTCACCTGCTaGAGGGTTTCACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: VFAPVLYRPAVLPMAAALIIFTC*RVSLSI
Trigger: AATGGACAGTGAAACCCTGCAGCAGGTGAAAATTAT...AAGTGCTGCTGCCATGGGAAGGACGGCTGGCCTGTACAGCACAGGAGCGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp AGCATTCCCTTCAGTCCCACAACAATAATGCTTGCAAGGACACACATGGGCAGCTGTGAAGTCACCACATaGGTGGCAGCCCCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: SIPFSPTTIMLARTHMGSCEVTT*VAAPVV
Trigger: GACAACTGGGGCTGCCACCCATGTGGTGACTTCACA...GCTGCCCATGTGTGTCCTTGCAAGCATTATTGTTGTGGGACTGAAGGGAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp CAAGCCACCTGTGTCTTCGCTCCTGTGCTGTACAGGCCAGCCGTCCTTCCCATGAAGGAAGCTGTACAATaGGCTAACAATACATCCACA +
Preference number: 4 (lower is better)
Translates to: QATCVFAPVLYRPAVLPMKEAVQ*ANNTST
Trigger: TGTGGATGTATTGTTAGCCCATTGTACAGCTTCCTT...CATGGGAAGGACGGCTGGCCTGTACAGCACAGGAGCGAAGACACAGGTGGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR TCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTCGGGGGAGCTCTAGGTaGGGGAATTCCTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCRGSSR*GNSLWN
Trigger: ATTCCACAAGGAATTCCCTCACCTAGAGCTCCCCCG...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000523719.5
ENST00000617233.2
CDS-3UTR GCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGGTGGCACTGCCCAGTTaGAGCACAAACATGGCCACC +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLVALPS*STNMAT
Trigger: GGTGGCCATGTTTGTGCTGCAACTGGGCAGTGCCAC...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCGTGGCACTGCCCAGTTaGAGCACAAACATGGCCACC +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSVALPS*STNMAT
Trigger: GGTGGCCATGTTTGTGCTGCAACTGGGCAGTGCCAC...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AGCATTCCCTTCAGTCCCACAACAATAATGCTTGCAAGGACACACATGGGCAGCGTGCCCAATCCAAAATaGGCAGTCGCCTTCTACACC +
Preference number: 4 (lower is better)
Translates to: SIPFSPTTIMLARTHMGSVPNPK*AVAFYT
Trigger: GGTGTAGAAGGCGACTGCCCATTTTGGATTGGGCAC...GCTGCCCATGTGTGTCCTTGCAAGCATTATTGTTGTGGGACTGAAGGGAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTTGTGAAGTCACCACATaGGTGGCAGCCCCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCCEVTT*VAAPVV
Trigger: GACAACTGGGGCTGCCACCCATGTGGTGACTTCACA...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGCAGCCGTCCTTCCCATaGCAGCAGCACTTGGTATGC +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLQPSFP*QQHLVC
Trigger: GCATACCAAGTGCTGCTGCCATGGGAAGGACGGCTG...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTCGGGGGAGCTCTAGGTaGGGGAATTCCTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTRGSSR*GNSLWN
Trigger: ATTCCACAAGGAATTCCCTCACCTAGAGCTCCCCCG...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000523719.5
ENST00000617233.2
CDS-3UTR TCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCCTCCGAAAGCTTCAGTaGTCACCGCAGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSLRKLQ*SPQRGC
Trigger: ACATCCTCTCTGCGGTGATCACTGAAGCTTTCGGAG...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACGTGGCACTGCCCAGTTaGAGCACAAACATGGCCACC +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDVALPS*STNMAT
Trigger: GGTGGCCATGTTTGTGCTGCAACTGGGCAGTGCCAC...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCAGCCCCAGTTGTCATTaGGCTGATCACAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSSPSCH*ADHRLC
Trigger: ACAGAGCCTGTGATCAGCGCAATGACAACTGGGGCT...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAAGCCACCTGTGTCTTCGCTCCTGTGCTGTACAGGCCAGCCGTCCTTCCCATGATGGATATGACTTATTaGAGCAGATACCGATTCAAA +
Preference number: 4 (lower is better)
Translates to: QATCVFAPVLYRPAVLPMMDMTY*SRYRFK
Trigger: TTTGAATCGGTATCTGCTGCAATAAGTCATATCCAT...CATGGGAAGGACGGCTGGCCTGTACAGCACAGGAGCGAAGACACAGGTGGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp ATAGCCTACAAGTGCCACTCCGAAAGCTTCAGTGATCACCGCAGAGAGGATGTTGTTGCAGCACAAACATaGCCACCTGAATCACACCTC +
Preference number: 4 (lower is better)
Translates to: IAYKCHSESFSDHRREDVVAAQT*PPESHL
Trigger: GAGGTGTGATTCAGGTGGCCATGTTTGTGCTGCAAC...AACATCCTCTCTGCGGTGATCACTGAAGCTTTCGGAGTGGCACTTGTAGGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCTGTGAAGTCACCACATaGGTGGCAGCCCCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSCEVTT*VAAPVV
Trigger: GACAACTGGGGCTGCCACCCATGTGGTGACTTCACA...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCCAGCCGTCCTTCCCATaGCAGCAGCACTTGGTATGC +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSQPSFP*QQHLVC
Trigger: GCATACCAAGTGCTGCTGCCATGGGAAGGACGGCTG...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTCCTTGGGTCACCTGTTaGACTGCCAACATTATCCCA +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCPWVTC*TANIIP
Trigger: TGGGATAATGTTGGCAGTTCAACAGGTGACCCAAGG...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCACAAACATGGCCACCTaGATCACACCTCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSTNMAT*ITPPKK
Trigger: CTTCTTGGGAGGTGTGATTCAGGTGGCCATGTTTGT...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACAAACATGGCCACCTaGATCACACCTCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCTNMAT*ITPPKK
Trigger: CTTCTTGGGAGGTGTGATTCAGGTGGCCATGTTTGT...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCCGGGGGAGCTCTAGGTaGGGGAATTCCTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSRGSSR*GNSLWN
Trigger: ATTCCACAAGGAATTCCCTCACCTAGAGCTCCCCCG...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276609.8
ENST00000617233.2
CDS-3UTR TCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGCTCCGAAAGCTTCAGTaGTCACCGCAGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLLRKLQ*SPQRGC
Trigger: ACATCCTCTCTGCGGTGATCACTGAAGCTTTCGGAG...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTTTGAGCAAGAGCCAGTaGGGCCACATAGCCTACAAG +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTLSKSQ*GHIAYK
Trigger: CTTGTAGGCTATGTGGCCTCACTGGCTCTTGCTCAA...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGTTGAGCAAGAGCCAGTaGGGCCACATAGCCTACAAG +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLLSKSQ*GHIAYK
Trigger: CTTGTAGGCTATGTGGCCTCACTGGCTCTTGCTCAA...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGTTGAGCAAGAGCCAGTaGGGCCACATAGCCTACAAG +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALLSKSQ*GHIAYK
Trigger: CTTGTAGGCTATGTGGCCTCACTGGCTCTTGCTCAA...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTTTTTTGGCAGATCCTTaGGCAAGAGCCAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTFLADP*ARASEA
Trigger: GGCCTCACTGGCTCTTGCTCAAGGATCTGCCAAAAA...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCCCACAAATGTGGCACTaGCCAGTTGCAGCACAAACA +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSPQMWH*PVAAQT
Trigger: TGTTTGTGCTGCAACTGGGCAGTGCCACATTTGTGG...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTAGCCCCAGTTGTCATTaGGCTGATCACAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTSPSCH*ADHRLC
Trigger: ACAGAGCCTGTGATCAGCGCAATGACAACTGGGGCT...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTAGTGTCTTCGCTCCTGTaGTGTACAGGCCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLVSSLL*CTGQPS
Trigger: GGACGGCTGGCCTGTACAGCACAGGAGCGAAGACAC...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp TTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCATGTGTCTTCGCTCCTGTaGTGTACAGGCCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: FHLLQGFTVHFCLHFKFHVSSLL*CTGQPS
Trigger: GGACGGCTGGCCTGTACAGCACAGGAGCGAAGACAC...ATGGAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTAGGCAAAGGTGCCTGTaGCAACATGATGTCCCATTC +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCRQRCL*QHDVPF
Trigger: GAATGGGACATCATGTTGCCACAGGCACCTTTGCCT...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTAAGTCACCACATGGGTaGCAGCCCCAGTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTKSPHG*QPQLSL
Trigger: CAATGACAACTGGGGCTGCCACCCATGTGGTGACTT...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGAAGTCACCACATGGGTaGCAGCCCCAGTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLKSPHG*QPQLSL
Trigger: CAATGACAACTGGGGCTGCCACCCATGTGGTGACTT...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTCCTTGGGTCACCTGTTaGACTGCCAACATTATCCCA +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTPWVTC*TANIIP
Trigger: TGGGATAATGTTGGCAGTTCAACAGGTGACCCAAGG...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTGTGCCTGTGGCAACATaGTGTCCCATTCCAAATATG +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCVPVAT*CPIPNM
Trigger: CATATTTGGAATGGGACATCATGTTGCCACAGGCAC...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGACAAACATGGCCACCTaGATCACACCTCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALTNMAT*ITPPKK
Trigger: CTTCTTGGGAGGTGTGATTCAGGTGGCCATGTTTGT...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTACAAACATGGCCACCTaGATCACACCTCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTTNMAT*ITPPKK
Trigger: CTTCTTGGGAGGTGTGATTCAGGTGGCCATGTTTGT...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCGAGATATTTGACTTGTaGAGTCACCACATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSEIFDL*SHHMGG
Trigger: GCCACCCATGTGGTGACTTCACAAGTCAAATATCTC...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CTTGGGAAGCGTCCTATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTCTCCGAAAGCTTCAGTaGTCACCGCAGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: LGKRPITIAMVQTTPNSSLRKLQ*SPQRGC
Trigger: ACATCCTCTCTGCGGTGATCACTGAAGCTTTCGGAG...ACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGATAGGACGCTTCCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR TCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACCTCCGAAAGCTTCAGTaGTCACCGCAGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDLRKLQ*SPQRGC
Trigger: ACATCCTCTCTGCGGTGATCACTGAAGCTTTCGGAG...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACTTTTTGGCAGATCCTTaGGCAAGAGCCAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDFLADP*ARASEA
Trigger: GGCCTCACTGGCTCTTGCTCAAGGATCTGCCAAAAA...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GCGTCCTATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTCCCACATTTTTTTGGCAGATCCTTaGGCAAGAGCCAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ASYHYSYGTNNTKQQSHIFLADP*ARASEA
Trigger: GGCCTCACTGGCTCTTGCTCAAGGATCTGCCAAAAA...AATGTGGGACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGATAGGACGC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR TCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCTTTTTGGCAGATCCTTaGGCAAGAGCCAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSFLADP*ARASEA
Trigger: GGCCTCACTGGCTCTTGCTCAAGGATCTGCCAAAAA...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGCCTTGGAAGAGTGTTTaGTGGGAATGTGAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALPWKSV*WECELA
Trigger: GGCCAACTCACATTCCCATCAAACACTCTTCCAAGG...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCATGTCAAGGCAAAGGTaGCTGTGGCAACATGATGTC +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSMSRQR*LWQHDV
Trigger: GACATCATGTTGCCACAGGCACCTTTGCCTTGACAT...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCTCCCAAGAAGGAAACTaGTGCAGCAACGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSSQEGN*CSNVDP
Trigger: AGGATCCACGTTGCTGCAGCAGTTTCCTTCTTGGGA...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTTCCCAAGAAGGAAACTaGTGCAGCAACGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTSQEGN*CSNVDP
Trigger: AGGATCCACGTTGCTGCAGCAGTTTCCTTCTTGGGA...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCGTGGCACTGCCCAGTTaGAGCACAAACATGGCCACC +
Preference number: 4 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPIVALPS*STNMAT
Trigger: GGTGGCCATGTTTGTGCTGCAACTGGGCAGTGCCAC...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp ATTTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCGTGGCACTGCCCAGTTaGAGCACAAACATGGCCACC +
Preference number: 4 (lower is better)
Translates to: IFTCCRVSLSISVFTLNSVALPS*STNMAT
Trigger: GGTGGCCATGTTTGTGCTGCAACTGGGCAGTGCCAC...GGAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR GCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGCCACAAATGTGGCACTaGCCAGTTGCAGCACAAACA +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALPQMWH*PVAAQT
Trigger: TGTTTGTGCTGCAACTGGGCAGTGCCACATTTGTGG...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAGCCCCAGTTGTCATTaGGCTGATCACAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDSPSCH*ADHRLC
Trigger: ACAGAGCCTGTGATCAGCGCAATGACAACTGGGGCT...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAGTGTCTTCGCTCCTGTaGTGTACAGGCCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAVSSLL*CTGQPS
Trigger: GGACGGCTGGCCTGTACAGCACAGGAGCGAAGACAC...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTGTGTCTTCGCTCCTGTaGTGTACAGGCCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVVSSLL*CTGQPS
Trigger: GGACGGCTGGCCTGTACAGCACAGGAGCGAAGACAC...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACGTGCCCAATCCAAAATaGGCAGTCGCCTTCTACACC +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDVPNPK*AVAFYT
Trigger: GGTGTAGAAGGCGACTGCCCATTTTGGATTGGGCAC...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCGTGCCCAATCCAAAATaGGCAGTCGCCTTCTACACC +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSVPNPK*AVAFYT
Trigger: GGTGTAGAAGGCGACTGCCCATTTTGGATTGGGCAC...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGAGGCAAAGGTGCCTGTaGCAACATGATGTCCCATTC +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALRQRCL*QHDVPF
Trigger: GAATGGGACATCATGTTGCCACAGGCACCTTTGCCT...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGTTGCAGCACAAACATaGCCACCTGAATCACACCTC +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTVAAQT*PPESHL
Trigger: GAGGTGTGATTCAGGTGGCCATGTTTGTGCTGCAAC...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CTTGGGAAGCGTCCTATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTAAGTCACCACATGGGTaGCAGCCCCAGTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: LGKRPITIAMVQTTPNSSKSPHG*QPQLSL
Trigger: CAATGACAACTGGGGCTGCCACCCATGTGGTGACTT...ACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGATAGGACGCTTCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCCAGCCGTCCTTCCCATaGCAGCAGCACTTGGTATGC +
Preference number: 4 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPIQPSFP*QQHLVC
Trigger: GCATACCAAGTGCTGCTGCCATGGGAAGGACGGCTG...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp ATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTCCCACATTGGCAGCACCTTGGGTCACCTGTTaGACTGCCAACATTATCCCA +
Preference number: 4 (lower is better)
Translates to: ITIAMVQTTPNSSPTLAAPWVTC*TANIIP
Trigger: TGGGATAATGTTGGCAGTTCAACAGGTGACCCAAGG...TGCTGCCAATGTGGGACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR TCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGGTGCCTGTGGCAACATaGTGTCCCATTCCAAATATG +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLVPVAT*CPIPNM
Trigger: CATATTTGGAATGGGACATCATGTTGCCACAGGCAC...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAGATTCTGCATGTTCTaGGGGACAATCCGTTCCACG +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSRFCMF*GTIRST
Trigger: CGTGGAACGGATTGTCCCTCAGAACATGCAGAATCT...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAGATTCTGCATGTTCTaGGGGACAATCCGTTCCACG +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDRFCMF*GTIRST
Trigger: CGTGGAACGGATTGTCCCTCAGAACATGCAGAATCT...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCGAGATATTTGACTTGTaGAGTCACCACATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSEIFDL*SHHMGG
Trigger: GCCACCCATGTGGTGACTTCACAAGTCAAATATCTC...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTACTCCGAAAGCTTCAGTaGTCACCGCAGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLLRKLQ*SPQRGC
Trigger: ACATCCTCTCTGCGGTGATCACTGAAGCTTTCGGAG...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCAACACCTCCTTTCAATaGCAAGCTCCAATTCGTCTG +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSNTSFQ*QAPIRL
Trigger: CAGACGAATTGGAGCTTGGCATTGAAAGGAGGTGTT...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000523719.5
ENST00000617233.2
CDS-3UTR GCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGGGTCACCTGTTGAACTaGCAACATTATCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLGHLLN*QHYPRH
Trigger: GTGTCTGGGATAATGTTGGCAGTTCAACAGGTGACC...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCAAACCAAACACTGGGTaGACAGATGAGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSKPNTG*TDERTA
Trigger: TGCTGTTCTCTCATCTGTGCACCCAGTGTTTGGTTT...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTAAACCAAACACTGGGTaGACAGATGAGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCKPNTG*TDERTA
Trigger: TGCTGTTCTCTCATCTGTGCACCCAGTGTTTGGTTT...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCATGTCAAGGCAAAGGTaGCTGTGGCAACATGATGTC +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSMSRQR*LWQHDV
Trigger: GACATCATGTTGCCACAGGCACCTTTGCCTTGACAT...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCAAGAAGGAAACTGCTaGAGCAACGTGGATCCTTTG +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSQEGNC*SNVDPL
Trigger: CAAAGGATCCACGTTGCTGCAGCAGTTTCCTTCTTG...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTCAAGAAGGAAACTGCTaGAGCAACGTGGATCCTTTG +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTQEGNC*SNVDPL
Trigger: CAAAGGATCCACGTTGCTGCAGCAGTTTCCTTCTTG...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGCAAGAAGGAAACTGCTaGAGCAACGTGGATCCTTTG +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLQEGNC*SNVDPL
Trigger: CAAAGGATCCACGTTGCTGCAGCAGTTTCCTTCTTG...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACTCCCAAGAAGGAAACTaGTGCAGCAACGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDSQEGN*CSNVDP
Trigger: AGGATCCACGTTGCTGCAGCAGTTTCCTTCTTGGGA...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CTTGGGAAGCGTCCTATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTCCACAAATGTGGCACTaGCCAGTTGCAGCACAAACA +
Preference number: 4 (lower is better)
Translates to: LGKRPITIAMVQTTPNSSPQMWH*PVAAQT
Trigger: TGTTTGTGCTGCAACTGGGCAGTGCCACATTTGTGG...ACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGATAGGACGCTTCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR GCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCACATAGCCTACAAGTaGCACTCCGAAAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSHIAYK*HSESFS
Trigger: ACTGAAGCTTTCGGAGTGGCACTTGTAGGCTATGTG...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTCACATAGCCTACAAGTaGCACTCCGAAAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTHIAYK*HSESFS
Trigger: ACTGAAGCTTTCGGAGTGGCACTTGTAGGCTATGTG...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCCACAACAATAATGCTTaGAAGGACACACATGGGCAG +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSHNNNA*KDTHGQ
Trigger: CTGCCCATGTGTGTCCTTGCAAGCATTATTGTTGTG...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCATAATGTCTTCACACTaGGGGGTATGCATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSIMSSH*GVCILL
Trigger: GAGCAAGATGCATACCCCCCAGTGTGAAGACATTAT...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTCCCAGACACAGTGTCTaGAAGCAAGTTTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCPRHSV*KQVFFQ
Trigger: CTGAAAGAAAACTTGCTTCCAGACACTGTGTCTGGG...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGTCCGTTCCACGGCGTTaGCTGATATTAAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLSVPRR*LILRMS
Trigger: TGACATCCTTAATATCAGCCAACGCCGTGGAACGGA...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCACTGCTGCAGCAACGTaGATCCTTTGCATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSTAAAT*ILCISK
Trigger: CTTTGAAATGCAAAGGATCCACGTTGCTGCAGCAGT...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACGTTGCAGCACAAACATaGCCACCTGAATCACACCTC +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDVAAQT*PPESHL
Trigger: GAGGTGTGATTCAGGTGGCCATGTTTGTGCTGCAAC...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCGTTGCAGCACAAACATaGCCACCTGAATCACACCTC +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSVAAQT*PPESHL
Trigger: GAGGTGTGATTCAGGTGGCCATGTTTGTGCTGCAAC...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCACAGCCGTCCTTCCCATaGCAGCAGCACTTGGTATGC +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAQPSFP*QQHLVC
Trigger: GCATACCAAGTGCTGCTGCCATGGGAAGGACGGCTG...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGTTGCAAGGACACACATaGGCAGCCAGTAAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLLQGHT*AASKAK
Trigger: CTTTGCTTTACTGGCTGCCCATGTGTGTCCTTGCAA...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp ATAGCCTACAAGTGCCACTCCGAAAGCTTCAGTGATCACCGCAGAGAGGATGTTTCTCAGACTTCACTGTaGTCACTGAGTTTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: IAYKCHSESFSDHRREDVSQTSL*SLSLLK
Trigger: TTTGAGCAAACTCAGTGACCACAGTGAAGTCTGAGA...AACATCCTCTCTGCGGTGATCACTGAAGCTTTCGGAGTGGCACTTGTAGGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGCAAAATGCCAGCATATaGCCTCTTCAGGCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLQNASI*PLQAVG
Trigger: ACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTCAAAATGCCAGCATATaGCCTCTTCAGGCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTQNASI*PLQAVG
Trigger: ACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCGATGGGAATGTGAGTTaGCCTCACTCATTTCAATCC +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSDGNVS*PHSFQS
Trigger: GGATTGAAATGAGTGAGGCCAACTCACATTCCCATC...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACGTGCCTGTGGCAACATaGTGTCCCATTCCAAATATG +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDVPVAT*CPIPNM
Trigger: CATATTTGGAATGGGACATCATGTTGCCACAGGCAC...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GCATTCAGGAAAACAAGCGGGTTGTTTATTGAGATAATTTTCACCTGCTGCAGGAGATTCTGCATGTTCTaGGGGACAATCCGTTCCACG +
Preference number: 4 (lower is better)
Translates to: AFRKTSGLFIEIIFTCCRRFCMF*GTIRST
Trigger: CGTGGAACGGATTGTCCCTCAGAACATGCAGAATCT...CCTGCAGCAGGTGAAAATTATCTCAATAAACAACCCGCTTGTTTTCCTGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR TCA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTAAGATTCTGCATGTTCTaGGGGACAATCCGTTCCACG +
Preference number: 4 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLRFCMF*GTIRST
Trigger: CGTGGAACGGATTGTCCCTCAGAACATGCAGAATCT...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCTGTTACTCTGTGTGGTaGGATTCTGCATGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSCYSVW*DSACSE
Trigger: CTCAGAACATGCAGAATCTCACCACACAGAGTAACA...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GCATTCAGGAAAACAAGCGGGTTGTTTATTGAGATAATTTTCACCTGCTGCAGGACAAACATGGCCACCTaGATCACACCTCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: AFRKTSGLFIEIIFTCCRTNMAT*ITPPKK
Trigger: CTTCTTGGGAGGTGTGATTCAGGTGGCCATGTTTGT...CCTGCAGCAGGTGAAAATTATCTCAATAAACAACCCGCTTGTTTTCCTGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR TCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACGAGATATTTGACTTGTaGAGTCACCACATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDEIFDL*SHHMGG
Trigger: GCCACCCATGTGGTGACTTCACAAGTCAAATATCTC...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTATTGAGCAAGAGCCAGTaGGGCCACATAGCCTACAAG +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLLSKSQ*GHIAYK
Trigger: CTTGTAGGCTATGTGGCCTCACTGGCTCTTGCTCAA...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp AGCATTCCCTTCAGTCCCACAACAATAATGCTTGCAAGGACACACATGGGCAGCTTTGTTCACACTTGCTaGTATCATCAAGTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: SIPFSPTTIMLARTHMGSFVHTC*YHQVAD
Trigger: ATCAGCCACTTGATGATATCAGCAAGTGTGAACAAA...GCTGCCCATGTGTGTCCTTGCAAGCATTATTGTTGTGGGACTGAAGGGAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR TCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGATTAGGGCAGGACTGTaGAGCTTCTTCATTGCAGTT +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLIRAGL*SFFIAV
Trigger: AACTGCAATGAAGAAGCTTCACAGTCCTGCCCTAAT...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCACAAGAGCTGTACTGTaGCAAAAGGGTCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSTRAVL*QKGLRL
Trigger: AAGTCTGAGACCCTTTTGTCACAGTACAGCTCTTGT...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTACAAGAGCTGTACTGTaGCAAAAGGGTCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTTRAVL*QKGLRL
Trigger: AAGTCTGAGACCCTTTTGTCACAGTACAGCTCTTGT...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTTGTTTGATGGGAATGTaGGTTGGCCTCACTCATTTC +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTCLMGM*VGLTHF
Trigger: GAAATGAGTGAGGCCAACTCACATTCCCATCAAACA...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGCAGATTGTAATGTGGTaGCCAATCCAAAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALQIVMW*PIQNGQ
Trigger: CTGCCCATTTTGGATTGGGCACCACATTACAATCTG...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACGGTCACCTGTTGAACTaGCAACATTATCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDGHLLN*QHYPRH
Trigger: GTGTCTGGGATAATGTTGGCAGTTCAACAGGTGACC...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGAAACCAAACACTGGGTaGACAGATGAGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLKPNTG*TDERTA
Trigger: TGCTGTTCTCTCATCTGTGCACCCAGTGTTTGGTTT...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGAAACCAAACACTGGGTaGACAGATGAGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALKPNTG*TDERTA
Trigger: TGCTGTTCTCTCATCTGTGCACCCAGTGTTTGGTTT...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CTTGGGAAGCGTCCTATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTATGTCAAGGCAAAGGTaGCTGTGGCAACATGATGTC +
Preference number: 4 (lower is better)
Translates to: LGKRPITIAMVQTTPNSSMSRQR*LWQHDV
Trigger: GACATCATGTTGCCACAGGCACCTTTGCCTTGACAT...ACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGATAGGACGCTTCCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR GCA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCAGCCCCAGTTGTCATTaGGCTGATCACAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPISPSCH*ADHRLC
Trigger: ACAGAGCCTGTGATCAGCGCAATGACAACTGGGGCT...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACCACATAGCCTACAAGTaGCACTCCGAAAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDHIAYK*HSESFS
Trigger: ACTGAAGCTTTCGGAGTGGCACTTGTAGGCTATGTG...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTCACAACAATAATGCTTaGAAGGACACACATGGGCAG +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTHNNNA*KDTHGQ
Trigger: CTGCCCATGTGTGTCCTTGCAAGCATTATTGTTGTG...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGGAGATAATTTTCACCTaGTGCAGGGTTTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALEIIFT*CRVSLS
Trigger: GGACAGTGAAACCCTGCAGCAGGTGAAAATTATCTC...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGGTGAAGCTTCTTCATTaGAGTTGCCATTGGATAGGG +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLVKLLH*SCHWIG
Trigger: CCCTATCCAATGGCAACTGCAATGAAGAAGCTTCAC...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGTGAAGCTTCTTCATTaGAGTTGCCATTGGATAGGG +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTVKLLH*SCHWIG
Trigger: CCCTATCCAATGGCAACTGCAATGAAGAAGCTTCAC...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGGTGAAGCTTCTTCATTaGAGTTGCCATTGGATAGGG +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALVKLLH*SCHWIG
Trigger: CCCTATCCAATGGCAACTGCAATGAAGAAGCTTCAC...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCGTGAAGCTTCTTCATTaGAGTTGCCATTGGATAGGG +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSVKLLH*SCHWIG
Trigger: CCCTATCCAATGGCAACTGCAATGAAGAAGCTTCAC...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CTTGTGTGTCTAAACTCATGTTTAGCTCTTAAGCTCTCAGAACTCCATACCAGAGTGCCCAATCCAAAATaGGCAGTCGCCTTCTACACC +
Preference number: 4 (lower is better)
Translates to: LVCLNSCLALKLSELHTRVPNPK*AVAFYT
Trigger: GGTGTAGAAGGCGACTGCCCATTTTGGATTGGGCAC...TCTGGTATGGAGTTCTGAGAGCTTAAGAGCTAAACATGAGTTTAGACACACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCGTGCCCAATCCAAAATaGGCAGTCGCCTTCTACACC +
Preference number: 4 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPIVPNPK*AVAFYT
Trigger: GGTGTAGAAGGCGACTGCCCATTTTGGATTGGGCAC...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGCCCAGACACAGTGTCTaGAAGCAAGTTTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLPRHSV*KQVFFQ
Trigger: CTGAAAGAAAACTTGCTTCCAGACACTGTGTCTGGG...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTAAGGCAAAGGTGCCTGTaGCAACATGATGTCCCATTC +
Preference number: 4 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLRQRCL*QHDVPF
Trigger: GAATGGGACATCATGTTGCCACAGGCACCTTTGCCT...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GCATTCAGGAAAACAAGCGGGTTGTTTATTGAGATAATTTTCACCTGCTGCAGGAGGCAAAGGTGCCTGTaGCAACATGATGTCCCATTC +
Preference number: 4 (lower is better)
Translates to: AFRKTSGLFIEIIFTCCRRQRCL*QHDVPF
Trigger: GAATGGGACATCATGTTGCCACAGGCACCTTTGCCT...CCTGCAGCAGGTGAAAATTATCTCAATAAACAACCCGCTTGTTTTCCTGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTACTGCTGCAGCAACGTaGATCCTTTGCATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTTAAAT*ILCISK
Trigger: CTTTGAAATGCAAAGGATCCACGTTGCTGCAGCAGT...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGACTGCTGCAGCAACGTaGATCCTTTGCATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALTAAAT*ILCISK
Trigger: CTTTGAAATGCAAAGGATCCACGTTGCTGCAGCAGT...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTTGTGAAGTCACCACATaGGTGGCAGCCCCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVCEVTT*VAAPVV
Trigger: GACAACTGGGGCTGCCACCCATGTGGTGACTTCACA...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTATATTGCTGAGGCCATaGGCCAAAAATTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTILLRP*AKNSWL
Trigger: CAACCAGGAATTTTTGGCCCATGGCCTCAGCAATAT...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACTTGCAAGGACACACATaGGCAGCCAGTAAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDLQGHT*AASKAK
Trigger: CTTTGCTTTACTGGCTGCCCATGTGTGTCCTTGCAA...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTTCTCAGACTTCACTGTaGTCACTGAGTTTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCSQTSL*SLSLLK
Trigger: TTTGAGCAAACTCAGTGACCACAGTGAAGTCTGAGA...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGGATGGGAATGTGAGTTaGCCTCACTCATTTCAATCC +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALDGNVS*PHSFQS
Trigger: GGATTGAAATGAGTGAGGCCAACTCACATTCCCATC...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTACCTTGGGTCACCTGTTaGACTGCCAACATTATCCCA +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLPWVTC*TANIIP
Trigger: TGGGATAATGTTGGCAGTTCAACAGGTGACCCAAGG...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTTCCCAAGAGATATTTaGCTTGTGAAGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSFPRDI*LVKSPH
Trigger: ATGTGGTGACTTCACAAGTCAAATATCTCTTGGGAA...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AGCATTCCCTTCAGTCCCACAACAATAATGCTTGCAAGGACACACATGGGCAGCATATCATCAAGTGGCTaGTTACAGGCATTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SIPFSPTTIMLARTHMGSISSSG*LQAFSF
Trigger: AAAGGAAAATGCCTGTAATCAGCCACTTGATGATAT...GCTGCCCATGTGTGTCCTTGCAAGCATTATTGTTGTGGGACTGAAGGGAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR TCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTTTGTTCACACTTGCTaGTATCATCAAGTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSFVHTC*YHQVAD
Trigger: ATCAGCCACTTGATGATATCAGCAAGTGTGAACAAA...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCATTAGGGCAGGACTGTaGAGCTTCTTCATTGCAGTT +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSIRAGL*SFFIAV
Trigger: AACTGCAATGAAGAAGCTTCACAGTCCTGCCCTAAT...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACACAAGAGCTGTACTGTaGCAAAAGGGTCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDTRAVL*QKGLRL
Trigger: AAGTCTGAGACCCTTTTGTCACAGTACAGCTCTTGT...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACTGTTTGATGGGAATGTaGGTTGGCCTCACTCATTTC +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDCLMGM*VGLTHF
Trigger: GAAATGAGTGAGGCCAACTCACATTCCCATCAAACA...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCCCTACCAGTGACCAATaGATTAGAGATGGTGAATAT +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSPTSDQ*IRDGEY
Trigger: ATATTCACCATCTCTAATTCATTGGTCACTGGTAGG...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGAAGCTGTTCTACACCTaGGCAATTCCAAAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLKLFYT*AIPKRL
Trigger: TAACCTCTTTGGAATTGCTCAGGTGTAGAACAGCTT...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523719.5
ENST00000617233.2
CDS-3UTR GCA 90 bp GCATTCAGGAAAACAAGCGGGTTGTTTATTGAGATAATTTTCACCTGCTGCAGGGGTCACCTGTTGAACTaGCAACATTATCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: AFRKTSGLFIEIIFTCCRGHLLN*QHYPRH
Trigger: GTGTCTGGGATAATGTTGGCAGTTCAACAGGTGACC...CCTGCAGCAGGTGAAAATTATCTCAATAAACAACCCGCTTGTTTTCCTGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR GCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGGCAACGTGGATCCTTTaGATTTCAAAGTCGGATAAG +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLATWIL*ISKSDK
Trigger: CTTATCCGACTTTGAAATGCAAAGGATCCACGTTGC...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTACAAGAAGGAAACTGCTaGAGCAACGTGGATCCTTTG +
Preference number: 4 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLQEGNC*SNVDPL
Trigger: CAAAGGATCCACGTTGCTGCAGCAGTTTCCTTCTTG...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTACCACAAATGTGGCACTaGCCAGTTGCAGCACAAACA +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLPQMWH*PVAAQT
Trigger: TGTTTGTGCTGCAACTGGGCAGTGCCACATTTGTGG...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGAACAAGGACCACAATaGTCAGCAAGGATAAAAGCA +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTEQGPQ*SARIKA
Trigger: TGCTTTTATCCTTGCTGAGCATTGTGGTCCTTGTTC...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTATAATTTTCACCTGCTaGAGGGTTTCACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCIIFTC*RVSLSI
Trigger: AATGGACAGTGAAACCCTGCAGCAGGTGAAAATTAT...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCATAATTTTCACCTGCTaGAGGGTTTCACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSIIFTC*RVSLSI
Trigger: AATGGACAGTGAAACCCTGCAGCAGGTGAAAATTAT...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CTTGGGAAGCGTCCTATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTGAGATAATTTTCACCTaGTGCAGGGTTTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: LGKRPITIAMVQTTPNSSEIIFT*CRVSLS
Trigger: GGACAGTGAAACCCTGCAGCAGGTGAAAATTATCTC...ACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGATAGGACGCTTCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR GCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACGAGATAATTTTCACCTaGTGCAGGGTTTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDEIIFT*CRVSLS
Trigger: GGACAGTGAAACCCTGCAGCAGGTGAAAATTATCTC...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTATACATCCACACTCCTaGCTTTACAGTCCATGTAAA +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCIHPHS*LYSPCK
Trigger: TTTACATGGACTGTAAAGGCAGGAGTGTGGATGTAT...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTAAAAGTTGTGCAAAATaGCAGCATATGGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCKSCAK*QHMASS
Trigger: TGAAGAGGCCATATGCTGGCATTTTGCACAACTTTT...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTGCAGTTCTTTCCAACTaGTATGCAGTTACTAAGTCA +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCAVLSN*YAVTKS
Trigger: TGACTTAGTAACTGCATAGCAGTTGGAAAGAACTGC...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTTTTCAGATTGTAATGTaGTGCCCAATCCAAAATGGG +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCFQIVM*CPIQNG
Trigger: CCCATTTTGGATTGGGCACCACATTACAATCTGAAA...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTTTCAGATTGTAATGTaGTGCCCAATCCAAAATGGG +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSFQIVM*CPIQNG
Trigger: CCCATTTTGGATTGGGCACCACATTACAATCTGAAA...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CTTGTGTGTCTAAACTCATGTTTAGCTCTTAAGCTCTCAGAACTCCATACCAGAAGGCAAAGGTGCCTGTaGCAACATGATGTCCCATTC +
Preference number: 4 (lower is better)
Translates to: LVCLNSCLALKLSELHTRRQRCL*QHDVPF
Trigger: GAATGGGACATCATGTTGCCACAGGCACCTTTGCCT...TCTGGTATGGAGTTCTGAGAGCTTAAGAGCTAAACATGAGTTTAGACACACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACACTGCTGCAGCAACGTaGATCCTTTGCATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDTAAAT*ILCISK
Trigger: CTTTGAAATGCAAAGGATCCACGTTGCTGCAGCAGT...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAAAGTCACCACATGGGTaGCAGCCCCAGTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAKSPHG*QPQLSL
Trigger: CAATGACAACTGGGGCTGCCACCCATGTGGTGACTT...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGGTCCGGATATATATaGCATTTTCATTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSWSGYI*HFHSQE
Trigger: CTCTTGGGAATGAAAATGCCATATATATCCGGACCA...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp ATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTCCCACATTGGCAGCAATATTGCTGAGGCCATaGGCCAAAAATTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ITIAMVQTTPNSSPTLAAILLRP*AKNSWL
Trigger: CAACCAGGAATTTTTGGCCCATGGCCTCAGCAATAT...TGCTGCCAATGTGGGACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp AGTTCATCTTATACTGGAATAGCACAAAGCTATTCTGCTAGTGGTATTTTCTCACAGCCGTCCTTCCCATaGCAGCAGCACTTGGTATGC +
Preference number: 4 (lower is better)
Translates to: SSSYTGIAQSYSASGIFSQPSFP*QQHLVC
Trigger: GCATACCAAGTGCTGCTGCCATGGGAAGGACGGCTG...TGAGAAAATACCACTAGCAGAATAGCTTTGTGCTATTCCAGTATAAGATGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGTACAGTCATTGCTCTTaGGAAGCGTCCTATCACTAT +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLYSHCS*EASYHY
Trigger: ATAGTGATAGGACGCTTCCCAAGAGCAATGACTGTA...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCTACAGTCATTGCTCTTaGGAAGCGTCCTATCACTAT +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSYSHCS*EASYHY
Trigger: ATAGTGATAGGACGCTTCCCAAGAGCAATGACTGTA...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTGCTGATATCATCAAGTaGCTGATTACAGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCADIIK*LITGIF
Trigger: GAAAATGCCTGTAATCAGCCACTTGATGATATCAGC...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTAAGGAAGCTGTACAATaGGCTAACAATACATCCACA +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCKEAVQ*ANNTST
Trigger: TGTGGATGTATTGTTAGCCCATTGTACAGCTTCCTT...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTTCTCAGACTTCACTGTaGTCACTGAGTTTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTSQTSL*SLSLLK
Trigger: TTTGAGCAAACTCAGTGACCACAGTGAAGTCTGAGA...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTGAACAAATTAATACTTaGAGAGGCACCAGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCEQINT*RGTSFR
Trigger: TCTGAAGCTGGTGCCTCTCCAAGTATTAATTTGTTC...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAAGATTCTGCATGTTCTaGGGGACAATCCGTTCCACG +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVARFCMF*GTIRST
Trigger: CGTGGAACGGATTGTCCCTCAGAACATGCAGAATCT...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCGAGATATTTGACTTGTaGAGTCACCACATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPIEIFDL*SHHMGG
Trigger: GCCACCCATGTGGTGACTTCACAAGTCAAATATCTC...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTTTCCCAAGAGATATTTaGCTTGTGAAGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTFPRDI*LVKSPH
Trigger: ATGTGGTGACTTCACAAGTCAAATATCTCTTGGGAA...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTCCAGTCGCACAGACTTaGTGTTTTCAAAAACATATG +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTPVAQT*CFQKHM
Trigger: CATATGTTTTTGAAAACATCAAGTCTGTGCGACTGG...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGACGGGGGAGCTCTAGGTaGGGGAATTCCTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: NSISKDGNISLEARYQSRRGSSR*GNSLWN
Trigger: ATTCCACAAGGAATTCCCTCACCTAGAGCTCCCCCG...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTAAGAAACTATATTGCTaGGGCCATGGGCCAAAAATT +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTKKLYC*GHGPKI
Trigger: AATTTTTGGCCCATGGCCTCAGCAATATAGTTTCTT...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCAAGAAACTATATTGCTaGGGCCATGGGCCAAAAATT +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSKKLYC*GHGPKI
Trigger: AATTTTTGGCCCATGGCCTCAGCAATATAGTTTCTT...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCTTTGTTCACACTTGCTaGTATCATCAAGTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSFVHTC*YHQVAD
Trigger: ATCAGCCACTTGATGATATCAGCAAGTGTGAACAAA...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTCACTGTGGTCACTaGGTTTGCTCAAATTCTTAT +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSLHCGH*VCSNSY
Trigger: ATAAGAATTTGAGCAAACTCAGTGACCACAGTGAAG...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTAATGTCAAGGCAAAGGTaGCTGTGGCAACATGATGTC +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLMSRQR*LWQHDV
Trigger: GACATCATGTTGCCACAGGCACCTTTGCCTTGACAT...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACGCAACGTGGATCCTTTaGATTTCAAAGTCGGATAAG +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDATWIL*ISKSDK
Trigger: CTTATCCGACTTTGAAATGCAAAGGATCCACGTTGC...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCCAAGAAGGAAACTGCTaGAGCAACGTGGATCCTTTG +
Preference number: 4 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPIQEGNC*SNVDPL
Trigger: CAAAGGATCCACGTTGCTGCAGCAGTTTCCTTCTTG...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp TTTATCAAGGAAGCTGTACAATGGGCTAACAATACATCCACACTCCTGCCTTTACAAGAAGGAAACTGCTaGAGCAACGTGGATCCTTTG +
Preference number: 4 (lower is better)
Translates to: FIKEAVQWANNTSTLLPLQEGNC*SNVDPL
Trigger: CAAAGGATCCACGTTGCTGCAGCAGTTTCCTTCTTG...TAAAGGCAGGAGTGTGGATGTATTGTTAGCCCATTGTACAGCTTCCTTGATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR GCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCACCACAAATGTGGCACTaGCCAGTTGCAGCACAAACA +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAPQMWH*PVAAQT
Trigger: TGTTTGTGCTGCAACTGGGCAGTGCCACATTTGTGG...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTAGCCCCAGTTGTCATTaGGCTGATCACAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: ILSISNIHSKTDQCQELGSPSCH*ADHRLC
Trigger: ACAGAGCCTGTGATCAGCGCAATGACAACTGGGGCT...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GCGTCCTATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTCCCACATTGAACAAGGACCACAATaGTCAGCAAGGATAAAAGCA +
Preference number: 4 (lower is better)
Translates to: ASYHYSYGTNNTKQQSHIEQGPQ*SARIKA
Trigger: TGCTTTTATCCTTGCTGAGCATTGTGGTCCTTGTTC...AATGTGGGACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGATAGGACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR GCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCGAACAAGGACCACAATaGTCAGCAAGGATAAAAGCA +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSEQGPQ*SARIKA
Trigger: TGCTTTTATCCTTGCTGAGCATTGTGGTCCTTGTTC...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCCACATAGCCTACAAGTaGCACTCCGAAAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPIHIAYK*HSESFS
Trigger: ACTGAAGCTTTCGGAGTGGCACTTGTAGGCTATGTG...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTATACATCCACACTCCTaGCTTTACAGTCCATGTAAA +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTIHPHS*LYSPCK
Trigger: TTTACATGGACTGTAAAGGCAGGAGTGTGGATGTAT...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGATACATCCACACTCCTaGCTTTACAGTCCATGTAAA +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALIHPHS*LYSPCK
Trigger: TTTACATGGACTGTAAAGGCAGGAGTGTGGATGTAT...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCAAAAGTTGTGCAAAATaGCAGCATATGGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSKSCAK*QHMASS
Trigger: TGAAGAGGCCATATGCTGGCATTTTGCACAACTTTT...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGGCAGTTCTTTCCAACTaGTATGCAGTTACTAAGTCA +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLAVLSN*YAVTKS
Trigger: TGACTTAGTAACTGCATAGCAGTTGGAAAGAACTGC...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGACTTTCCTTAACTCATaGTTACCTACCAGTGACCAA +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLTFLNS*LPTSDQ
Trigger: TTGGTCACTGGTAGGTAAGCATGAGTTAAGGAAAGT...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTACTTTCCTTAACTCATaGTTACCTACCAGTGACCAA +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTTFLNS*LPTSDQ
Trigger: TTGGTCACTGGTAGGTAAGCATGAGTTAAGGAAAGT...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTGTGCCCAATCCAAAATaGGCAGTCGCCTTCTACACC +
Preference number: 4 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLVPNPK*AVAFYT
Trigger: GGTGTAGAAGGCGACTGCCCATTTTGGATTGGGCAC...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCTTTCAGATTGTAATGTaGTGCCCAATCCAAAATGGG +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSFQIVM*CPIQNG
Trigger: CCCATTTTGGATTGGGCACCACATTACAATCTGAAA...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGTTTCAGATTGTAATGTaGTGCCCAATCCAAAATGGG +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLFQIVM*CPIQNG
Trigger: CCCATTTTGGATTGGGCACCACATTACAATCTGAAA...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTACCCAGACACAGTGTCTaGAAGCAAGTTTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLPRHSV*KQVFFQ
Trigger: CTGAAAGAAAACTTGCTTCCAGACACTGTGTCTGGG...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCTCCGTTCCACGGCGTTaGCTGATATTAAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPISVPRR*LILRMS
Trigger: TGACATCCTTAATATCAGCCAACGCCGTGGAACGGA...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAGTTGCAGCACAAACATaGCCACCTGAATCACACCTC +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAVAAQT*PPESHL
Trigger: GAGGTGTGATTCAGGTGGCCATGTTTGTGCTGCAAC...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGATGTGAAGTCACCACATaGGTGGCAGCCCCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: NSISKDGNISLEARYQSRCEVTT*VAAPVV
Trigger: GACAACTGGGGCTGCCACCCATGTGGTGACTTCACA...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTTGGTCCGGATATATATaGCATTTTCATTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTWSGYI*HFHSQE
Trigger: CTCTTGGGAATGAAAATGCCATATATATCCGGACCA...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTAATATTGCTGAGGCCATaGGCCAAAAATTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLILLRP*AKNSWL
Trigger: CAACCAGGAATTTTTGGCCCATGGCCTCAGCAATAT...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTATTGCAAGGACACACATaGGCAGCCAGTAAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLLQGHT*AASKAK
Trigger: CTTTGCTTTACTGGCTGCCCATGTGTGTCCTTGCAA...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp ATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTCCCACATTGGCAGCATACAGTCATTGCTCTTaGGAAGCGTCCTATCACTAT +
Preference number: 4 (lower is better)
Translates to: ITIAMVQTTPNSSPTLAAYSHCS*EASYHY
Trigger: ATAGTGATAGGACGCTTCCCAAGAGCAATGACTGTA...TGCTGCCAATGTGGGACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCGCTGATATCATCAAGTaGCTGATTACAGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSADIIK*LITGIF
Trigger: GAAAATGCCTGTAATCAGCCACTTGATGATATCAGC...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGAAGGAAGCTGTACAATaGGCTAACAATACATCCACA +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALKEAVQ*ANNTST
Trigger: TGTGGATGTATTGTTAGCCCATTGTACAGCTTCCTT...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTAAGGAAGCTGTACAATaGGCTAACAATACATCCACA +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTKEAVQ*ANNTST
Trigger: TGTGGATGTATTGTTAGCCCATTGTACAGCTTCCTT...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGCCAACAAAGCTTCAGTaGAAAACAGAGCCTCTTATT +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALPTKLQ*KTEPLI
Trigger: AATAAGAGGCTCTGTTTTCCACTGAAGCTTTGTTGG...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCTCCCTATTTGAAATCTaGCCACAAACTCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSSLFEI*PQTHCQ
Trigger: TTGGCAATGAGTTTGTGGCCAGATTTCAAATAGGGA...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCCAATCCTCAGAGCGGTaGCATTGTTGGAAGATCCAA +
Preference number: 4 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPIQSSER*HCWKIQ
Trigger: TTGGATCTTCCAACAATGCCACCGCTCTGAGGATTG...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGGAACAAATTAATACTTaGAGAGGCACCAGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLEQINT*RGTSFR
Trigger: TCTGAAGCTGGTGCCTCTCCAAGTATTAATTTGTTC...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTATGTTACTCTGTGTGGTaGGATTCTGCATGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLCYSVW*DSACSE
Trigger: CTCAGAACATGCAGAATCTCACCACACAGAGTAACA...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAGAGATATTTGACTTGTaGAGTCACCACATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAEIFDL*SHHMGG
Trigger: GCCACCCATGTGGTGACTTCACAAGTCAAATATCTC...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCCCAGTCGCACAGACTTaGTGTTTTCAAAAACATATG +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSPVAQT*CFQKHM
Trigger: CATATGTTTTTGAAAACATCAAGTCTGTGCGACTGG...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTATTCCTTGTGGAATATaGCCAACTACTTCTAATCCA +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTIPCGI*PTTSNP
Trigger: TGGATTAGAAGTAGTTGGTCATATTCCACAAGGAAT...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000523719.5
ENST00000617233.2
CDS-3UTR TCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGATTCCTTGTGGAATATaGCCAACTACTTCTAATCCA +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLIPCGI*PTTSNP
Trigger: TGGATTAGAAGTAGTTGGTCATATTCCACAAGGAAT...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000523719.5
ENST00000617233.2
CDS-3UTR TCA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCACTCCGAAAGCTTCAGTaGTCACCGCAGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: ALDSTNSISKDGNISLEALRKLQ*SPQRGC
Trigger: ACATCCTCTCTGCGGTGATCACTGAAGCTTTCGGAG...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCATTTTTGGCAGATCCTTaGGCAAGAGCCAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ALDSTNSISKDGNISLEAFLADP*ARASEA
Trigger: GGCCTCACTGGCTCTTGCTCAAGGATCTGCCAAAAA...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGAAACTATATTGCTaGGGCCATGGGCCAAAAATT +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSKKLYC*GHGPKI
Trigger: AATTTTTGGCCCATGGCCTCAGCAATATAGTTTCTT...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTAATTAGGGCAGGACTGTaGAGCTTCTTCATTGCAGTT +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLIRAGL*SFFIAV
Trigger: AACTGCAATGAAGAAGCTTCACAGTCCTGCCCTAAT...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp ATTTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCATTAGGGCAGGACTGTaGAGCTTCTTCATTGCAGTT +
Preference number: 4 (lower is better)
Translates to: IFTCCRVSLSISVFTLNSIRAGL*SFFIAV
Trigger: AACTGCAATGAAGAAGCTTCACAGTCCTGCCCTAAT...GGAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR TCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACCTTCACTGTGGTCACTaGGTTTGCTCAAATTCTTAT +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDLHCGH*VCSNSY
Trigger: ATAAGAATTTGAGCAAACTCAGTGACCACAGTGAAG...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCCTTCACTGTGGTCACTaGGTTTGCTCAAATTCTTAT +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSLHCGH*VCSNSY
Trigger: ATAAGAATTTGAGCAAACTCAGTGACCACAGTGAAG...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp ATTTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCACAAGAGCTGTACTGTaGCAAAAGGGTCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: IFTCCRVSLSISVFTLNSTRAVL*QKGLRL
Trigger: AAGTCTGAGACCCTTTTGTCACAGTACAGCTCTTGT...GGAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR TCA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTCCTTGGAAGAGTGTTTaGTGGGAATGTGAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: ILSISNIHSKTDQCQELGPWKSV*WECELA
Trigger: GGCCAACTCACATTCCCATCAAACACTCTTCCAAGG...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAGGTCACCTGTTGAACTaGCAACATTATCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAGHLLN*QHYPRH
Trigger: GTGTCTGGGATAATGTTGGCAGTTCAACAGGTGACC...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp TTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCATAAACCAAACACTGGGTaGACAGATGAGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: FHLLQGFTVHFCLHFKFHKPNTG*TDERTA
Trigger: TGCTGTTCTCTCATCTGTGCACCCAGTGTTTGGTTT...ATGGAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR GCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAATGTCAAGGCAAAGGTaGCTGTGGCAACATGATGTC +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAMSRQR*LWQHDV
Trigger: GACATCATGTTGCCACAGGCACCTTTGCCTTGACAT...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTTCCCAAGAAGGAAACTaGTGCAGCAACGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: ILSISNIHSKTDQCQELGSQEGN*CSNVDP
Trigger: AGGATCCACGTTGCTGCAGCAGTTTCCTTCTTGGGA...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTCCACAAATGTGGCACTaGCCAGTTGCAGCACAAACA +
Preference number: 4 (lower is better)
Translates to: ILSISNIHSKTDQCQELGPQMWH*PVAAQT
Trigger: TGTTTGTGCTGCAACTGGGCAGTGCCACATTTGTGG...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCACACATAGCCTACAAGTaGCACTCCGAAAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAHIAYK*HSESFS
Trigger: ACTGAAGCTTTCGGAGTGGCACTTGTAGGCTATGTG...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGAAGCAAAGGTCCTATTaGATAGATGACTATAAGGAC +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALKQRSY*IDDYKD
Trigger: GTCCTTATAGTCATCTATGCAATAGGACCTTTGCTT...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTACACAACAATAATGCTTaGAAGGACACACATGGGCAG +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLHNNNA*KDTHGQ
Trigger: CTGCCCATGTGTGTCCTTGCAAGCATTATTGTTGTG...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTTCCATAATACGTCATTaGTTTTATCAAGGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCSIIRH*FYQGSC
Trigger: ACAGCTTCCTTGATAAAAGCAATGACGTATTATGGA...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCATGGATATGACTTATTaGAGCAGATACCGATTCAAA +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSMDMTY*SRYRFK
Trigger: TTTGAATCGGTATCTGCTGCAATAAGTCATATCCAT...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCGCAGTTCTTTCCAACTaGTATGCAGTTACTAAGTCA +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSAVLSN*YAVTKS
Trigger: TGACTTAGTAACTGCATAGCAGTTGGAAAGAACTGC...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGTGGCCACAAACTCATTaGCAAACAGCATATTCTATA +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALWPQTH*QTAYSI
Trigger: TATAGAATATGCTGTTTGGCAATGAGTTTGTGGCCA...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCTGGCCACAAACTCATTaGCAAACAGCATATTCTATA +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSWPQTH*QTAYSI
Trigger: TATAGAATATGCTGTTTGGCAATGAGTTTGTGGCCA...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTAATAATGTCTTCACACTaGGGGGTATGCATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLIMSSH*GVCILL
Trigger: GAGCAAGATGCATACCCCCCAGTGTGAAGACATTAT...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp ATTTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCATAATGTCTTCACACTaGGGGGTATGCATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: IFTCCRVSLSISVFTLNSIMSSH*GVCILL
Trigger: GAGCAAGATGCATACCCCCCAGTGTGAAGACATTAT...GGAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCCCCAGACACAGTGTCTaGAAGCAAGTTTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPIPRHSV*KQVFFQ
Trigger: CTGAAAGAAAACTTGCTTCCAGACACTGTGTCTGGG...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCATCCGTTCCACGGCGTTaGCTGATATTAAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVASVPRR*LILRMS
Trigger: TGACATCCTTAATATCAGCCAACGCCGTGGAACGGA...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTTCCGTTCCACGGCGTTaGCTGATATTAAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVSVPRR*LILRMS
Trigger: TGACATCCTTAATATCAGCCAACGCCGTGGAACGGA...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCACTGCTGCAGCAACGTaGATCCTTTGCATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPITAAAT*ILCISK
Trigger: CTTTGAAATGCAAAGGATCCACGTTGCTGCAGCAGT...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp TTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCATACTGCTGCAGCAACGTaGATCCTTTGCATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: FHLLQGFTVHFCLHFKFHTAAAT*ILCISK
Trigger: CTTTGAAATGCAAAGGATCCACGTTGCTGCAGCAGT...ATGGAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGAAAGTCACCACATGGGTaGCAGCCCCAGTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: NSISKDGNISLEARYQSRKSPHG*QPQLSL
Trigger: CAATGACAACTGGGGCTGCCACCCATGTGGTGACTT...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCTGGTCCGGATATATATaGCATTTTCATTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSWSGYI*HFHSQE
Trigger: CTCTTGGGAATGAAAATGCCATATATATCCGGACCA...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCATAAAAGAATCCAAGTaGTCCGGATATATATGGCAT +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSIKESK*SGYIWH
Trigger: ATGCCATATATATCCGGACCACTTGGATTCTTTTAT...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CTTGTGTGTCTAAACTCATGTTTAGCTCTTAAGCTCTCAGAACTCCATACCAGAATATTGCTGAGGCCATaGGCCAAAAATTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LVCLNSCLALKLSELHTRILLRP*AKNSWL
Trigger: CAACCAGGAATTTTTGGCCCATGGCCTCAGCAATAT...TCTGGTATGGAGTTCTGAGAGCTTAAGAGCTAAACATGAGTTTAGACACACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCATTGCAAGGACACACATaGGCAGCCAGTAAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVALQGHT*AASKAK
Trigger: CTTTGCTTTACTGGCTGCCCATGTGTGTCCTTGCAA...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CTTGGGAAGCGTCCTATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTAAACCTCAACAAGCATaGAGACTCCAGAATAGTCAA +
Preference number: 4 (lower is better)
Translates to: LGKRPITIAMVQTTPNSSKPQQA*RLQNSQ
Trigger: TTGACTATTCTGGAGTCTCCATGCTTGTTGAGGTTT...ACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGATAGGACGCTTCCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAACCTCAACAAGCATaGAGACTCCAGAATAGTCAA +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDKPQQA*RLQNSQ
Trigger: TTGACTATTCTGGAGTCTCCATGCTTGTTGAGGTTT...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCACAAAATGCCAGCATATaGCCTCTTCAGGCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAQNASI*PLQAVG
Trigger: ACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCGAACTTGGTTTTATTTaGATACCCGTTTCTTTCGAT +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSELGFI*IPVSFD
Trigger: ATCGAAAGAAACGGGTATCCAAATAAAACCAAGTTC...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276609.8
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGCCAATGTCAAGAACTTaGTTTTATTTGGATACCCGT +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALPMSRT*FYLDTR
Trigger: ACGGGTATCCAAATAAAACCAAGTTCTTGACATTGG...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGCCAATGTCAAGAACTTaGTTTTATTTGGATACCCGT +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLPMSRT*FYLDTR
Trigger: ACGGGTATCCAAATAAAACCAAGTTCTTGACATTGG...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCCAGTTCATCTTATACTaGAATAGCACAAAGCTATTC +
Preference number: 4 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSQFILY*NSTKLF
Trigger: GAATAGCTTTGTGCTATTCCAGTATAAGATGAACTG...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGGTTCAGCCTAGCCTATaGCGTTTATTTGTCAATTAT +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLVQPSL*RLFVNY
Trigger: ATAATTGACAAATAAACGCCATAGGCTAGGCTGAAC...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CTTGGGAAGCGTCCTATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTGAACAAATTAATACTTaGAGAGGCACCAGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LGKRPITIAMVQTTPNSSEQINT*RGTSFR
Trigger: TCTGAAGCTGGTGCCTCTCCAAGTATTAATTTGTTC...ACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGATAGGACGCTTCCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACGAACAAATTAATACTTaGAGAGGCACCAGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDEQINT*RGTSFR
Trigger: TCTGAAGCTGGTGCCTCTCCAAGTATTAATTTGTTC...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AGTTCATCTTATACTGGAATAGCACAAAGCTATTCTGCTAGTGGTATTTTCTCACCTTGGGTCACCTGTTaGACTGCCAACATTATCCCA +
Preference number: 4 (lower is better)
Translates to: SSSYTGIAQSYSASGIFSPWVTC*TANIIP
Trigger: TGGGATAATGTTGGCAGTTCAACAGGTGACCCAAGG...TGAGAAAATACCACTAGCAGAATAGCTTTGTGCTATTCCAGTATAAGATGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTGTGCCTGTGGCAACATaGTGTCCCATTCCAAATATG +
Preference number: 4 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLVPVAT*CPIPNM
Trigger: CATATTTGGAATGGGACATCATGTTGCCACAGGCAC...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATTCTGCATGTTCTaGGGGACAATCCGTTCCACG +
Preference number: 4 (lower is better)
Translates to: ALDSTNSISKDGNISLEARFCMF*GTIRST
Trigger: CGTGGAACGGATTGTCCCTCAGAACATGCAGAATCT...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCATGTTACTCTGTGTGGTaGGATTCTGCATGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVACYSVW*DSACSE
Trigger: CTCAGAACATGCAGAATCTCACCACACAGAGTAACA...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGAACAAACATGGCCACCTaGATCACACCTCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: NSISKDGNISLEARYQSRTNMAT*ITPPKK
Trigger: CTTCTTGGGAGGTGTGATTCAGGTGGCCATGTTTGT...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTATTAGGGCAGGACTGTaGAGCTTCTTCATTGCAGTT +
Preference number: 4 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVIRAGL*SFFIAV
Trigger: AACTGCAATGAAGAAGCTTCACAGTCCTGCCCTAAT...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAATTAGGGCAGGACTGTaGAGCTTCTTCATTGCAGTT +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAIRAGL*SFFIAV
Trigger: AACTGCAATGAAGAAGCTTCACAGTCCTGCCCTAAT...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAAATCTTTGGATTGTaGAAGTACCACTTAACTCCC +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSKIFGL*KYHLTP
Trigger: GGGAGTTAAGTGGTACTTTCACAATCCAAAGATTTT...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCGCAACGTGGATCCTTTaGATTTCAAAGTCGGATAAG +
Preference number: 4 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPIATWIL*ISKSDK
Trigger: CTTATCCGACTTTGAAATGCAAAGGATCCACGTTGC...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp ATTTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCGCAACGTGGATCCTTTaGATTTCAAAGTCGGATAAG +
Preference number: 4 (lower is better)
Translates to: IFTCCRVSLSISVFTLNSATWIL*ISKSDK
Trigger: CTTATCCGACTTTGAAATGCAAAGGATCCACGTTGC...GGAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR GCA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGATCCCAAGAAGGAAACTaGTGCAGCAACGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: NSISKDGNISLEARYQSRSQEGN*CSNVDP
Trigger: AGGATCCACGTTGCTGCAGCAGTTTCCTTCTTGGGA...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTCACATAGCCTACAAGTaGCACTCCGAAAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLHIAYK*HSESFS
Trigger: ACTGAAGCTTTCGGAGTGGCACTTGTAGGCTATGTG...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGCAAAGGTCCTATTaGATAGATGACTATAAGGAC +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSKQRSY*IDDYKD
Trigger: GTCCTTATAGTCATCTATGCAATAGGACCTTTGCTT...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCACACAACAATAATGCTTaGAAGGACACACATGGGCAG +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAHNNNA*KDTHGQ
Trigger: CTGCCCATGTGTGTCCTTGCAAGCATTATTGTTGTG...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAGAGATAATTTTCACCTaGTGCAGGGTTTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAEIIFT*CRVSLS
Trigger: GGACAGTGAAACCCTGCAGCAGGTGAAAATTATCTC...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTAATACATCCACACTCCTaGCTTTACAGTCCATGTAAA +
Preference number: 4 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLIHPHS*LYSPCK
Trigger: TTTACATGGACTGTAAAGGCAGGAGTGTGGATGTAT...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCATGGATATGACTTATTaGAGCAGATACCGATTCAAA +
Preference number: 4 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSMDMTY*SRYRFK
Trigger: TTTGAATCGGTATCTGCTGCAATAAGTCATATCCAT...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGAAGGCAAAGGTGCCTGTaGCAACATGATGTCCCATTC +
Preference number: 4 (lower is better)
Translates to: NSISKDGNISLEARYQSRRQRCL*QHDVPF
Trigger: GAATGGGACATCATGTTGCCACAGGCACCTTTGCCT...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTTCCGTTCCACGGCGTTaGCTGATATTAAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLSVPRR*LILRMS
Trigger: TGACATCCTTAATATCAGCCAACGCCGTGGAACGGA...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAGTTGCAGCACAAACATaGCCACCTGAATCACACCTC +
Preference number: 4 (lower is better)
Translates to: ALDSTNSISKDGNISLEAVAAQT*PPESHL
Trigger: GAGGTGTGATTCAGGTGGCCATGTTTGTGCTGCAAC...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTTGGGCCAAAAATTCCTaGTTGTCATCAATTGAATAT +
Preference number: 4 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTWAKNS*LSSIEY
Trigger: ATATTCAATTGATGACAACCAGGAATTTTTGGCCCA...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTCAAAATGCCAGCATATaGCCTCTTCAGGCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: ILSISNIHSKTDQCQELGQNASI*PLQAVG
Trigger: ACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTCAAAATGCCAGCATATaGCCTCTTCAGGCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLQNASI*PLQAVG
Trigger: ACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGGAACTTGGTTTTATTTaGATACCCGTTTCTTTCGAT +
Preference number: 4 (lower is better)
Translates to: SQNSIPETSSRLTVIVALELGFI*IPVSFD
Trigger: ATCGAAAGAAACGGGTATCCAAATAAAACCAAGTTC...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGGAACTTGGTTTTATTTaGATACCCGTTTCTTTCGAT +
Preference number: 4 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLELGFI*IPVSFD
Trigger: ATCGAAAGAAACGGGTATCCAAATAAAACCAAGTTC...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276609.8
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTGATGGGAATGTGAGTTaGCCTCACTCATTTCAATCC +
Preference number: 4 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVDGNVS*PHSFQS
Trigger: GGATTGAAATGAGTGAGGCCAACTCACATTCCCATC...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTAGAGCGGTGGCATTGTTaGAAGATCCAAGTTATCAAA +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLERWHC*KIQVIK
Trigger: TTTGATAACTTGGATCTTCCAACAATGCCACCGCTC...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGAGTGCCTGTGGCAACATaGTGTCCCATTCCAAATATG +
Preference number: 4 (lower is better)
Translates to: NSISKDGNISLEARYQSRVPVAT*CPIPNM
Trigger: CATATTTGGAATGGGACATCATGTTGCCACAGGCAC...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp AGTTCATCTTATACTGGAATAGCACAAAGCTATTCTGCTAGTGGTATTTTCTCAGTGCCTGTGGCAACATaGTGTCCCATTCCAAATATG +
Preference number: 4 (lower is better)
Translates to: SSSYTGIAQSYSASGIFSVPVAT*CPIPNM
Trigger: CATATTTGGAATGGGACATCATGTTGCCACAGGCAC...TGAGAAAATACCACTAGCAGAATAGCTTTGTGCTATTCCAGTATAAGATGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTTGTTACTCTGTGTGGTaGGATTCTGCATGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: ILSISNIHSKTDQCQELGCYSVW*DSACSE
Trigger: CTCAGAACATGCAGAATCTCACCACACAGAGTAACA...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCTTCCCAAGAGATATTTaGCTTGTGAAGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPIFPRDI*LVKSPH
Trigger: ATGTGGTGACTTCACAAGTCAAATATCTCTTGGGAA...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp TTTATCAAGGAAGCTGTACAATGGGCTAACAATACATCCACACTCCTGCCTTTATTCCCAAGAGATATTTaGCTTGTGAAGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: FIKEAVQWANNTSTLLPLFPRDI*LVKSPH
Trigger: ATGTGGTGACTTCACAAGTCAAATATCTCTTGGGAA...TAAAGGCAGGAGTGTGGATGTATTGTTAGCCCATTGTACAGCTTCCTTGATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR TCA 90 bp TTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCATCCAGTCGCACAGACTTaGTGTTTTCAAAAACATATG +
Preference number: 4 (lower is better)
Translates to: FHLLQGFTVHFCLHFKFHPVAQT*CFQKHM
Trigger: CATATGTTTTTGAAAACATCAAGTCTGTGCGACTGG...ATGGAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR TCA 90 bp CTTGTGTGTCTAAACTCATGTTTAGCTCTTAAGCTCTCAGAACTCCATACCAGATTTGTTCACACTTGCTaGTATCATCAAGTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LVCLNSCLALKLSELHTRFVHTC*YHQVAD
Trigger: ATCAGCCACTTGATGATATCAGCAAGTGTGAACAAA...TCTGGTATGGAGTTCTGAGAGCTTAAGAGCTAAACATGAGTTTAGACACACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTACAAGAGCTGTACTGTaGCAAAAGGGTCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: ILSISNIHSKTDQCQELGTRAVL*QKGLRL
Trigger: AAGTCTGAGACCCTTTTGTCACAGTACAGCTCTTGT...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTAACACCTCCTTTCAATaGCAAGCTCCAATTCGTCTG +
Preference number: 4 (lower is better)
Translates to: ILSISNIHSKTDQCQELGNTSFQ*QAPIRL
Trigger: CAGACGAATTGGAGCTTGGCATTGAAAGGAGGTGTT...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276609.8
ENST00000617233.2
CDS-3UTR GCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTAACACCTCCTTTCAATaGCAAGCTCCAATTCGTCTG +
Preference number: 4 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLNTSFQ*QAPIRL
Trigger: CAGACGAATTGGAGCTTGGCATTGAAAGGAGGTGTT...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276609.8
ENST00000617233.2
CDS-3UTR GCA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAGGTCACCTGTTGAACTaGCAACATTATCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: ALDSTNSISKDGNISLEAGHLLN*QHYPRH
Trigger: GTGTCTGGGATAATGTTGGCAGTTCAACAGGTGACC...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp GCATTCAGGAAAACAAGCGGGTTGTTTATTGAGATAATTTTCACCTGCTGCAGGAAGCAAAGGTCCTATTaGATAGATGACTATAAGGAC +
Preference number: 4 (lower is better)
Translates to: AFRKTSGLFIEIIFTCCRKQRSY*IDDYKD
Trigger: GTCCTTATAGTCATCTATGCAATAGGACCTTTGCTT...CCTGCAGCAGGTGAAAATTATCTCAATAAACAACCCGCTTGTTTTCCTGAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR GCA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTCACAACAATAATGCTTaGAAGGACACACATGGGCAG +
Preference number: 4 (lower is better)
Translates to: ILSISNIHSKTDQCQELGHNNNA*KDTHGQ
Trigger: CTGCCCATGTGTGTCCTTGCAAGCATTATTGTTGTG...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTAATAATTTTCACCTGCTaGAGGGTTTCACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLIIFTC*RVSLSI
Trigger: AATGGACAGTGAAACCCTGCAGCAGGTGAAAATTAT...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCATACATCCACACTCCTaGCTTTACAGTCCATGTAAA +
Preference number: 4 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPIIHPHS*LYSPCK
Trigger: TTTACATGGACTGTAAAGGCAGGAGTGTGGATGTAT...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp TTTATCAAGGAAGCTGTACAATGGGCTAACAATACATCCACACTCCTGCCTTTAATACATCCACACTCCTaGCTTTACAGTCCATGTAAA +
Preference number: 4 (lower is better)
Translates to: FIKEAVQWANNTSTLLPLIHPHS*LYSPCK
Trigger: TTTACATGGACTGTAAAGGCAGGAGTGTGGATGTAT...TAAAGGCAGGAGTGTGGATGTATTGTTAGCCCATTGTACAGCTTCCTTGATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR GCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACTCCATAATACGTCATTaGTTTTATCAAGGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDSIIRH*FYQGSC
Trigger: ACAGCTTCCTTGATAAAAGCAATGACGTATTATGGA...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCATGGATATGACTTATTaGAGCAGATACCGATTCAAA +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSMDMTY*SRYRFK
Trigger: TTTGAATCGGTATCTGCTGCAATAAGTCATATCCAT...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp TTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCATAAAAGTTGTGCAAAATaGCAGCATATGGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: FHLLQGFTVHFCLHFKFHKSCAK*QHMASS
Trigger: TGAAGAGGCCATATGCTGGCATTTTGCACAACTTTT...ATGGAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTAGCTCCAATTCGTCTGTaGTTTACAATGTCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLAPIRL*FTMSKL
Trigger: AAGCTTTGACATTGTAAACCACAGACGAATTGGAGC...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCTTTCAGATTGTAATGTaGTGCCCAATCCAAAATGGG +
Preference number: 4 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPIFQIVM*CPIQNG
Trigger: CCCATTTTGGATTGGGCACCACATTACAATCTGAAA...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTCCCAGACACAGTGTCTaGAAGCAAGTTTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLPRHSV*KQVFFQ
Trigger: CTGAAAGAAAACTTGCTTCCAGACACTGTGTCTGGG...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACATAAAAGAATCCAAGTaGTCCGGATATATATGGCAT +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDIKESK*SGYIWH
Trigger: ATGCCATATATATCCGGACCACTTGGATTCTTTTAT...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACTGGGCCAAAAATTCCTaGTTGTCATCAATTGAATAT +
Preference number: 4 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDWAKNS*LSSIEY
Trigger: ATATTCAATTGATGACAACCAGGAATTTTTGGCCCA...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCTGGGCCAAAAATTCCTaGTTGTCATCAATTGAATAT +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSWAKNS*LSSIEY
Trigger: ATATTCAATTGATGACAACCAGGAATTTTTGGCCCA...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AGTTCATCTTATACTGGAATAGCACAAAGCTATTCTGCTAGTGGTATTTTCTCATTGCAAGGACACACATaGGCAGCCAGTAAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: SSSYTGIAQSYSASGIFSLQGHT*AASKAK
Trigger: CTTTGCTTTACTGGCTGCCCATGTGTGTCCTTGCAA...TGAGAAAATACCACTAGCAGAATAGCTTTGTGCTATTCCAGTATAAGATGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CTTGTGTGTCTAAACTCATGTTTAGCTCTTAAGCTCTCAGAACTCCATACCAGAGCTGATATCATCAAGTaGCTGATTACAGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: LVCLNSCLALKLSELHTRADIIK*LITGIF
Trigger: GAAAATGCCTGTAATCAGCCACTTGATGATATCAGC...TCTGGTATGGAGTTCTGAGAGCTTAAGAGCTAAACATGAGTTTAGACACACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTAAAGGAAGCTGTACAATaGGCTAACAATACATCCACA +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLKEAVQ*ANNTST
Trigger: TGTGGATGTATTGTTAGCCCATTGTACAGCTTCCTT...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCCAGTTCATCTTATACTaGAATAGCACAAAGCTATTC +
Preference number: 4 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSQFILY*NSTKLF
Trigger: GAATAGCTTTGTGCTATTCCAGTATAAGATGAACTG...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTAGTTCAGCCTAGCCTATaGCGTTTATTTGTCAATTAT +
Preference number: 4 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLVQPSL*RLFVNY
Trigger: ATAATTGACAAATAAACGCCATAGGCTAGGCTGAAC...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CTTGTGTGTCTAAACTCATGTTTAGCTCTTAAGCTCTCAGAACTCCATACCAGATCCCTATTTGAAATCTaGCCACAAACTCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: LVCLNSCLALKLSELHTRSLFEI*PQTHCQ
Trigger: TTGGCAATGAGTTTGTGGCCAGATTTCAAATAGGGA...TCTGGTATGGAGTTCTGAGAGCTTAAGAGCTAAACATGAGTTTAGACACACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAGCTCCAATTCGTCTGTaGTTTACAATGTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAAPIRL*FTMSKL
Trigger: CAGCTTTGACATTGTAAACCACAGACGAATTGGAGC...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523719.5
ENST00000617233.2
CDS-3UTR TCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCATTCCCAAGAGATATTTaGCTTGTGAAGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAFPRDI*LVKSPH
Trigger: ATGTGGTGACTTCACAAGTCAAATATCTCTTGGGAA...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CTTGTGTGTCTAAACTCATGTTTAGCTCTTAAGCTCTCAGAACTCCATACCAGAATTCCTTGTGGAATATaGCCAACTACTTCTAATCCA +
Preference number: 4 (lower is better)
Translates to: LVCLNSCLALKLSELHTRIPCGI*PTTSNP
Trigger: TGGATTAGAAGTAGTTGGTCATATTCCACAAGGAAT...TCTGGTATGGAGTTCTGAGAGCTTAAGAGCTAAACATGAGTTTAGACACACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276609.8
ENST00000617233.2
CDS-3UTR TCA 90 bp AATTTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCTTCACTGTGGTCACTaGGTTTGCTCAAATTCTTAT +
Preference number: 4 (lower is better)
Translates to: NFHLLQGFTVHFCLHFKFLHCGH*VCSNSY
Trigger: ATAAGAATTTGAGCAAACTCAGTGACCACAGTGAAG...GAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR TCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCACTTCACTGTGGTCACTaGGTTTGCTCAAATTCTTAT +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVALHCGH*VCSNSY
Trigger: ATAAGAATTTGAGCAAACTCAGTGACCACAGTGAAG...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AGTTCATCTTATACTGGAATAGCACAAAGCTATTCTGCTAGTGGTATTTTCTCATGTTTGATGGGAATGTaGGTTGGCCTCACTCATTTC +
Preference number: 4 (lower is better)
Translates to: SSSYTGIAQSYSASGIFSCLMGM*VGLTHF
Trigger: GAAATGAGTGAGGCCAACTCACATTCCCATCAAACA...TGAGAAAATACCACTAGCAGAATAGCTTTGTGCTATTCCAGTATAAGATGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTCCTACCAGTGACCAATaGATTAGAGATGGTGAATAT +
Preference number: 4 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVPTSDQ*IRDGEY
Trigger: ATATTCACCATCTCTAATTCATTGGTCACTGGTAGG...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTAACACTTCAGATCATGTaGGCACTAGATTCTACAAAT +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLTLQIM*ALDSTN
Trigger: ATTTGTAGAATCTAGTGCTCACATGATCTGAAGTGT...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTTCTCTGTTCTACACCTaGGCAATTCCAAAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLSLFYT*AIPKRL
Trigger: TAACCTCTTTGGAATTGCTCAGGTGTAGAACAGAGA...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617078.3
CDS-3UTR TCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTAAGCTGTTCTACACCTaGGCAATTCCAAAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLKLFYT*AIPKRL
Trigger: TAACCTCTTTGGAATTGCTCAGGTGTAGAACAGCTT...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617233.2
CDS-3UTR GCA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAACACCTCCTTTCAATaGCAAGCTCCAATTCGTCTG +
Preference number: 4 (lower is better)
Translates to: ALDSTNSISKDGNISLEANTSFQ*QAPIRL
Trigger: CAGACGAATTGGAGCTTGGCATTGAAAGGAGGTGTT...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGAAAACCAAACACTGGGTaGACAGATGAGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: NSISKDGNISLEARYQSRKPNTG*TDERTA
Trigger: TGCTGTTCTCTCATCTGTGCACCCAGTGTTTGGTTT...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTGCAACGTGGATCCTTTaGATTTCAAAGTCGGATAAG +
Preference number: 4 (lower is better)
Translates to: ILSISNIHSKTDQCQELGATWIL*ISKSDK
Trigger: CTTATCCGACTTTGAAATGCAAAGGATCCACGTTGC...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTAAAGCAAAGGTCCTATTaGATAGATGACTATAAGGAC +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLKQRSY*IDDYKD
Trigger: GTCCTTATAGTCATCTATGCAATAGGACCTTTGCTT...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAATAATTTTCACCTGCTaGAGGGTTTCACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAIIFTC*RVSLSI
Trigger: AATGGACAGTGAAACCCTGCAGCAGGTGAAAATTAT...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AGTTCATCTTATACTGGAATAGCACAAAGCTATTCTGCTAGTGGTATTTTCTCAGAGATAATTTTCACCTaGTGCAGGGTTTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: SSSYTGIAQSYSASGIFSEIIFT*CRVSLS
Trigger: GGACAGTGAAACCCTGCAGCAGGTGAAAATTATCTC...TGAGAAAATACCACTAGCAGAATAGCTTTGTGCTATTCCAGTATAAGATGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAGAGATAATTTTCACCTaGTGCAGGGTTTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: ALDSTNSISKDGNISLEAEIIFT*CRVSLS
Trigger: GGACAGTGAAACCCTGCAGCAGGTGAAAATTATCTC...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAGTGAAGCTTCTTCATTaGAGTTGCCATTGGATAGGG +
Preference number: 4 (lower is better)
Translates to: ALDSTNSISKDGNISLEAVKLLH*SCHWIG
Trigger: CCCTATCCAATGGCAACTGCAATGAAGAAGCTTCAC...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTATCCATAATACGTCATTaGTTTTATCAAGGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLSIIRH*FYQGSC
Trigger: ACAGCTTCCTTGATAAAAGCAATGACGTATTATGGA...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTAATGGATATGACTTATTaGAGCAGATACCGATTCAAA +
Preference number: 4 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLMDMTY*SRYRFK
Trigger: TTTGAATCGGTATCTGCTGCAATAAGTCATATCCAT...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAAAAAGTTGTGCAAAATaGCAGCATATGGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAKSCAK*QHMASS
Trigger: TGAAGAGGCCATATGCTGGCATTTTGCACAACTTTT...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AATTTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCCAGCTTCAGATTCTTaGTTATCTTCCAGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: NFHLLQGFTVHFCLHFKFPASDS*LSSSPF
Trigger: AAAAGGACTGGAAGATAAGCAAGAATCTGAAGCTGG...GAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR GCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCACCAGCTTCAGATTCTTaGTTATCTTCCAGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAPASDS*LSSSPF
Trigger: AAAAGGACTGGAAGATAAGCAAGAATCTGAAGCTGG...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522181.5
ENST00000523719.5
CDS-3UTR CCA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTGCTCCAATTCGTCTGTaGTTTACAATGTCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVAPIRL*FTMSKL
Trigger: AAGCTTTGACATTGTAAACCACAGACGAATTGGAGC...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276609.8
CDS-3UTR CCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCATTTCAGATTGTAATGTaGTGCCCAATCCAAAATGGG +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAFQIVM*CPIQNG
Trigger: CCCATTTTGGATTGGGCACCACATTACAATCTGAAA...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCATGGTCCGGATATATATaGCATTTTCATTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAWSGYI*HFHSQE
Trigger: CTCTTGGGAATGAAAATGCCATATATATCCGGACCA...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTATGGGCCAAAAATTCCTaGTTGTCATCAATTGAATAT +
Preference number: 4 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLWAKNS*LSSIEY
Trigger: ATATTCAATTGATGACAACCAGGAATTTTTGGCCCA...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAATATTGCTGAGGCCATaGGCCAAAAATTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ALDSTNSISKDGNISLEAILLRP*AKNSWL
Trigger: CAACCAGGAATTTTTGGCCCATGGCCTCAGCAATAT...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTTACAGTCATTGCTCTTaGGAAGCGTCCTATCACTAT +
Preference number: 4 (lower is better)
Translates to: ILSISNIHSKTDQCQELGYSHCS*EASYHY
Trigger: ATAGTGATAGGACGCTTCCCAAGAGCAATGACTGTA...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAGCTGATATCATCAAGTaGCTGATTACAGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAADIIK*LITGIF
Trigger: GAAAATGCCTGTAATCAGCCACTTGATGATATCAGC...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTAAACCTCAACAAGCATaGAGACTCCAGAATAGTCAA +
Preference number: 4 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVKPQQA*RLQNSQ
Trigger: TTGACTATTCTGGAGTCTCCATGCTTGTTGAGGTTT...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAAAGGAAGCTGTACAATaGGCTAACAATACATCCACA +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAKEAVQ*ANNTST
Trigger: TGTGGATGTATTGTTAGCCCATTGTACAGCTTCCTT...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTCCAACAAAGCTTCAGTaGAAAACAGAGCCTCTTATT +
Preference number: 4 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVPTKLQ*KTEPLI
Trigger: AATAAGAGGCTCTGTTTTCCACTGAAGCTTTGTTGG...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTTCCCTATTTGAAATCTaGCCACAAACTCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVSLFEI*PQTHCQ
Trigger: TTGGCAATGAGTTTGTGGCCAGATTTCAAATAGGGA...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR CAA 72 bp CTCCAACAAAGCTTCAGTGGAAAACAGAGCCTCTTATaGGGTAGAAATGTTAAAATTAGAGCTATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LQQSFSGKQSLL*GRNVKIRAIGS
Trigger: AGACCCAATAGCTCTAATTTTAACATTTCTACCCAATAAGAGGCTCTGTTTTCCACTGAAGCTTTGTTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR CAA 72 bp TTGGTTTCTCTGAGTCTAGGTTTCCATAATACGTCATaGCTTTTATCAAGGAAGCTGTACAATGGGCTAACA +
Preference number: 4 (lower is better)
Translates to: LVSLSLGFHNTS*LLSRKLYNGLT
Trigger: TGTTAGCCCATTGTACAGCTTCCTTGATAAAAGCAATGACGTATTATGGAAACCTAGACTCAGAGAAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR TCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTTTCCCAAGAGATATTTaGCTTGTGAAGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLFPRDI*LVKSPH
Trigger: ATGTGGTGACTTCACAAGTCAAATATCTCTTGGGAA...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTATATCATCAAGTGGCTaGTTACAGGCATTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVISSSG*LQAFSF
Trigger: AAAGGAAAATGCCTGTAATCAGCCACTTGATGATAT...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAATATCATCAAGTGGCTaGTTACAGGCATTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAISSSG*LQAFSF
Trigger: AAAGGAAAATGCCTGTAATCAGCCACTTGATGATAT...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTTTTGTTCACACTTGCTaGTATCATCAAGTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLFVHTC*YHQVAD
Trigger: ATCAGCCACTTGATGATATCAGCAAGTGTGAACAAA...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AGTTCATCTTATACTGGAATAGCACAAAGCTATTCTGCTAGTGGTATTTTCTCAGAACAAGGACCACAATaGTCAGCAAGGATAAAAGCA +
Preference number: 4 (lower is better)
Translates to: SSSYTGIAQSYSASGIFSEQGPQ*SARIKA
Trigger: TGCTTTTATCCTTGCTGAGCATTGTGGTCCTTGTTC...TGAGAAAATACCACTAGCAGAATAGCTTTGTGCTATTCCAGTATAAGATGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGAGAACAAGGACCACAATaGTCAGCAAGGATAAAAGCA +
Preference number: 4 (lower is better)
Translates to: NSISKDGNISLEARYQSREQGPQ*SARIKA
Trigger: TGCTTTTATCCTTGCTGAGCATTGTGGTCCTTGTTC...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAAAGCAAAGGTCCTATTaGATAGATGACTATAAGGAC +
Preference number: 4 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAKQRSY*IDDYKD
Trigger: GTCCTTATAGTCATCTATGCAATAGGACCTTTGCTT...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTATCCATAATACGTCATTaGTTTTATCAAGGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLSIIRH*FYQGSC
Trigger: ACAGCTTCCTTGATAAAAGCAATGACGTATTATGGA...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTAATGGATATGACTTATTaGAGCAGATACCGATTCAAA +
Preference number: 4 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLMDMTY*SRYRFK
Trigger: TTTGAATCGGTATCTGCTGCAATAAGTCATATCCAT...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTTGGCCACAAACTCATTaGCAAACAGCATATTCTATA +
Preference number: 4 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVWPQTH*QTAYSI
Trigger: TATAGAATATGCTGTTTGGCAATGAGTTTGTGGCCA...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCTGGGCCAAAAATTCCTaGTTGTCATCAATTGAATAT +
Preference number: 4 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPIWAKNS*LSSIEY
Trigger: ATATTCAATTGATGACAACCAGGAATTTTTGGCCCA...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp ATTTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCTGGGCCAAAAATTCCTaGTTGTCATCAATTGAATAT +
Preference number: 4 (lower is better)
Translates to: IFTCCRVSLSISVFTLNSWAKNS*LSSIEY
Trigger: ATATTCAATTGATGACAACCAGGAATTTTTGGCCCA...GGAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CCA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGATACAGTCATTGCTCTTaGGAAGCGTCCTATCACTAT +
Preference number: 4 (lower is better)
Translates to: NSISKDGNISLEARYQSRYSHCS*EASYHY
Trigger: ATAGTGATAGGACGCTTCCCAAGAGCAATGACTGTA...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTGCTGATATCATCAAGTaGCTGATTACAGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: ILSISNIHSKTDQCQELGADIIK*LITGIF
Trigger: GAAAATGCCTGTAATCAGCCACTTGATGATATCAGC...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTAAACCTCAACAAGCATaGAGACTCCAGAATAGTCAA +
Preference number: 4 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLKPQQA*RLQNSQ
Trigger: TTGACTATTCTGGAGTCTCCATGCTTGTTGAGGTTT...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTGTTCAGCCTAGCCTATaGCGTTTATTTGTCAATTAT +
Preference number: 4 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVVQPSL*RLFVNY
Trigger: ATAATTGACAAATAAACGCCATAGGCTAGGCTGAAC...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCACCAGTCGCACAGACTTaGTGTTTTCAAAAACATATG +
Preference number: 4 (lower is better)
Translates to: ALDSTNSISKDGNISLEAPVAQT*CFQKHM
Trigger: CATATGTTTTTGAAAACATCAAGTCTGTGCGACTGG...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp AGTTCATCTTATACTGGAATAGCACAAAGCTATTCTGCTAGTGGTATTTTCTCAAAGAAACTATATTGCTaGGGCCATGGGCCAAAAATT +
Preference number: 4 (lower is better)
Translates to: SSSYTGIAQSYSASGIFSKKLYC*GHGPKI
Trigger: AATTTTTGGCCCATGGCCTCAGCAATATAGTTTCTT...TGAGAAAATACCACTAGCAGAATAGCTTTGTGCTATTCCAGTATAAGATGAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGAAAGAAACTATATTGCTaGGGCCATGGGCCAAAAATT +
Preference number: 4 (lower is better)
Translates to: NSISKDGNISLEARYQSRKKLYC*GHGPKI
Trigger: AATTTTTGGCCCATGGCCTCAGCAATATAGTTTCTT...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGATTTGTTCACACTTGCTaGTATCATCAAGTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: NSISKDGNISLEARYQSRFVHTC*YHQVAD
Trigger: ATCAGCCACTTGATGATATCAGCAAGTGTGAACAAA...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTAAAATCTTTGGATTGTaGAAGTACCACTTAACTCCC +
Preference number: 4 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLKIFGL*KYHLTP
Trigger: GGGAGTTAAGTGGTACTTTCACAATCCAAAGATTTT...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AGTTCATCTTATACTGGAATAGCACAAAGCTATTCTGCTAGTGGTATTTTCTCAACTTTCCTTAACTCATaGTTACCTACCAGTGACCAA +
Preference number: 4 (lower is better)
Translates to: SSSYTGIAQSYSASGIFSTFLNS*LPTSDQ
Trigger: TTGGTCACTGGTAGGTAAGCATGAGTTAAGGAAAGT...TGAGAAAATACCACTAGCAGAATAGCTTTGTGCTATTCCAGTATAAGATGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTGCATTAAAATATAACTaGTCAGACAATACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVALKYN*SDNTVS
Trigger: GGACACAGTATTGTCTGAGCAGTTATATTTTAATGC...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AGTTCATCTTATACTGGAATAGCACAAAGCTATTCTGCTAGTGGTATTTTCTCATGGTCCGGATATATATaGCATTTTCATTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: SSSYTGIAQSYSASGIFSWSGYI*HFHSQE
Trigger: CTCTTGGGAATGAAAATGCCATATATATCCGGACCA...TGAGAAAATACCACTAGCAGAATAGCTTTGTGCTATTCCAGTATAAGATGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGATGGTCCGGATATATATaGCATTTTCATTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: NSISKDGNISLEARYQSRWSGYI*HFHSQE
Trigger: CTCTTGGGAATGAAAATGCCATATATATCCGGACCA...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAGCTGATATCATCAAGTaGCTGATTACAGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: ALDSTNSISKDGNISLEAADIIK*LITGIF
Trigger: GAAAATGCCTGTAATCAGCCACTTGATGATATCAGC...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGAAAACCTCAACAAGCATaGAGACTCCAGAATAGTCAA +
Preference number: 4 (lower is better)
Translates to: NSISKDGNISLEARYQSRKPQQA*RLQNSQ
Trigger: TTGACTATTCTGGAGTCTCCATGCTTGTTGAGGTTT...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CCA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTCCAATGTCAAGAACTTaGTTTTATTTGGATACCCGT +
Preference number: 4 (lower is better)
Translates to: ILSISNIHSKTDQCQELGPMSRT*FYLDTR
Trigger: ACGGGTATCCAAATAAAACCAAGTTCTTGACATTGG...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR TCA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGAATTCCTTGTGGAATATaGCCAACTACTTCTAATCCA +
Preference number: 4 (lower is better)
Translates to: NSISKDGNISLEARYQSRIPCGI*PTTSNP
Trigger: TGGATTAGAAGTAGTTGGTCATATTCCACAAGGAAT...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR TCA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGAATATCATCAAGTGGCTaGTTACAGGCATTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: NSISKDGNISLEARYQSRISSSG*LQAFSF
Trigger: AAAGGAAAATGCCTGTAATCAGCCACTTGATGATAT...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR GCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTTCCATAATACGTCATTaGTTTTATCAAGGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLSIIRH*FYQGSC
Trigger: ACAGCTTCCTTGATAAAAGCAATGACGTATTATGGA...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTGCATTAAAATATAACTaGTCAGACAATACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLALKYN*SDNTVS
Trigger: GGACACAGTATTGTCTGAGCAGTTATATTTTAATGC...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR GCA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTGCATTAAAATATAACTaGTCAGACAATACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: ILSISNIHSKTDQCQELGALKYN*SDNTVS
Trigger: GGACACAGTATTGTCTGAGCAGTTATATTTTAATGC...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTCAGTTCATCTTATACTaGAATAGCACAAAGCTATTC +
Preference number: 4 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLQFILY*NSTKLF
Trigger: GAATAGCTTTGTGCTATTCCAGTATAAGATGAACTG...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
3UTR CAA 72 bp GCCTCTTATTGGGTAGAAATGTTAAAATTAGAGCTATaGGGTCTGAAGATCCTAAGCATTTCCAATATTCAC +
Preference number: 4 (lower is better)
Translates to: ASYWVEMLKLEL*GLKILSISNIH
Trigger: GTGAATATTGGAAATGCTTAGGATCTTCAGACCCAATAGCTCTAATTTTAACATTTCTACCCAATAAGAGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CCA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAATAAAAGAATCCAAGTaGTCCGGATATATATGGCAT +
Preference number: 4 (lower is better)
Translates to: ALDSTNSISKDGNISLEAIKESK*SGYIWH
Trigger: ATGCCATATATATCCGGACCACTTGGATTCTTTTAT...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS TCA 90 bp CCCAGCACGCTTGTGTTACTCTGTGTGGTGAGATTCTGCATGTTCTaGGGGACAATCCGTTCCACGGCGTTGGCTGATATTAAGGATGTC +
Preference number: 5 (lower is better)
Translates to: PSTLVLLCVVRFCMF*GTIRSTALADIKDV
Trigger: GACATCCTTAATATCAGCCAACGCCGTGGAACGGATTGTCCCTCAGAACATGCAGAATCTCACCACACAGAGTAACACAAGCGTGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000522181.5
ENST00000522862.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS TCA 90 bp TTTCAAAGTCGGATAAGCCCAGCACGCTTGTGTTACTCTGTGTGGTaGGATTCTGCATGTTCTGAGGGACAATCCGTTCCACGGCGTTGG +
Preference number: 5 (lower is better)
Translates to: FQSRISPARLCYSVW*DSACSEGQSVPRRW
Trigger: CCAACGCCGTGGAACGGATTGTCCCTCAGAACATGCAGAATCTCACCACACAGAGTAACACAAGCGTGCTGGGCTTATCCGACTTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000522181.5
ENST00000522862.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp ATAGCCTACAAGTGCCACTCCGAAAGCTTCAGTGATCACCGCAGAGAGGATGTTTCCTTGGGTCACCTGTaGAACTGCCAACATTATCCC +
Preference number: 5 (lower is better)
Translates to: IAYKCHSESFSDHRREDVSLGHL*NCQHYP
Trigger: GGGATAATGTTGGCAGTTCAACAGGTGACCCAAGGA...AACATCCTCTCTGCGGTGATCACTGAAGCTTTCGGAGTGGCACTTGTAGGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CAA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTAGCAAAGGCCAATCCTaGGGTCACCTGTTGAACTGC +
Preference number: 5 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCSKGQS*GHLLNC
Trigger: GCAGTTCAACAGGTGACCCAAGGATTGGCCTTTGCT...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCAGCAAAGGCCAATCCTaGGGTCACCTGTTGAACTGC +
Preference number: 5 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSSKGQS*GHLLNC
Trigger: GCAGTTCAACAGGTGACCCAAGGATTGGCCTTTGCT...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS TCA 90 bp TTTCATAAGTTCATCATTTTTAGGATCTGGGAGTGCACAGTGCAATaGTACAACTGGAGTGGAGAGGGACTGGGGGCACACTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: FHKFIIFRIWECTVQ*YNWSGEGLGAHSTW
Trigger: CCAGGTGGAGTGTGCCCCCAGTCCCTCTCCACTCCAGTTGTATCATTGCACTGTGCACTCCCAGATCCTAAAAATGATGAACTTATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520818.5
CDS GCA 90 bp ATCACACCTCCCAAGAAGGAAACTGCTGCAGCAACGTGGATCCTTTaGATTTCAAAGTCGGATAAGCCCAGCACGCTTGTGTTACTCTGT +
Preference number: 5 (lower is better)
Translates to: ITPPKKETAAATWIL*ISKSDKPSTLVLLC
Trigger: ACAGAGTAACACAAGCGTGCTGGGCTTATCCGACTTTGAAATGCAAAGGATCCACGTTGCTGCAGCAGTTTCCTTCTTGGGAGGTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000522181.5
ENST00000522862.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTATCCGTTCCACGGCGTaGGCTGATATTAAGGATGTC +
Preference number: 5 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCIRSTA*ADIKDV
Trigger: GACATCCTTAATATCAGCCAACGCCGTGGAACGGAT...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTGGCCTCTTCAGGCAGTaGGTAAAGACAAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCGLFRQ*VKTRAV
Trigger: TACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCC...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGTCCTTGGGTCACCTGTaGAACTGCCAACATTATCCC +
Preference number: 5 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLSLGHL*NCQHYP
Trigger: GGGATAATGTTGGCAGTTCAACAGGTGACCCAAGGA...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp ATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTCCCACATTGGCAGCAAGCAAAGGCCAATCCTaGGGTCACCTGTTGAACTGC +
Preference number: 5 (lower is better)
Translates to: ITIAMVQTTPNSSPTLAASKGQS*GHLLNC
Trigger: GCAGTTCAACAGGTGACCCAAGGATTGGCCTTTGCT...TGCTGCCAATGTGGGACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CAA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTATCCGTTCCACGGCGTaGGCTGATATTAAGGATGTC +
Preference number: 5 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTIRSTA*ADIKDV
Trigger: GACATCCTTAATATCAGCCAACGCCGTGGAACGGAT...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGGGCCTCTTCAGGCAGTaGGTAAAGACAAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLGLFRQ*VKTRAV
Trigger: TACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCC...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGGCCTCTTCAGGCAGTaGGTAAAGACAAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTGLFRQ*VKTRAV
Trigger: TACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCC...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACTCCTTGGGTCACCTGTaGAACTGCCAACATTATCCC +
Preference number: 5 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDSLGHL*NCQHYP
Trigger: GGGATAATGTTGGCAGTTCAACAGGTGACCCAAGGA...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTAAGCAAAGGCCAATCCTaGGGTCACCTGTTGAACTGC +
Preference number: 5 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLSKGQS*GHLLNC
Trigger: GCAGTTCAACAGGTGACCCAAGGATTGGCCTTTGCT...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCCATGGCAGCAGCACTaGGTATGCAGAAGAAAAATG +
Preference number: 5 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSPWQQH*VCRRKM
Trigger: CATTTTTCTTCTGCATACCAAGTGCTGCTGCCATGG...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTCCATGGCAGCAGCACTaGGTATGCAGAAGAAAAATG +
Preference number: 5 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTPWQQH*VCRRKM
Trigger: CATTTTTCTTCTGCATACCAAGTGCTGCTGCCATGG...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTAACAGCAGTCCCACATaGGCAGCAAAGCATATTGTA +
Preference number: 5 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCNSSPT*AAKHIV
Trigger: TACAATATGCTTTGCTGCCAATGTGGGACTGCTGTT...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp ATAGCCTACAAGTGCCACTCCGAAAGCTTCAGTGATCACCGCAGAGAGGATGTTGTGTTTTGTTCACACTaGCTGATATCATCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: IAYKCHSESFSDHRREDVVFCSH*LISSSG
Trigger: GCCACTTGATGATATCAGCAAGTGTGAACAAAACAC...AACATCCTCTCTGCGGTGATCACTGAAGCTTTCGGAGTGGCACTTGTAGGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CAA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTTGTGAAGCTTCTTCATaGCAGTTGCCATTGGATAGG +
Preference number: 5 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCCEASS*QLPLDR
Trigger: CCTATCCAATGGCAACTGCAATGAAGAAGCTTCACA...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACGGCCTCTTCAGGCAGTaGGTAAAGACAAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDGLFRQ*VKTRAV
Trigger: TACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCC...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS TCA 90 bp TCCGGATATATATGGCATTTTCATTCCCAAGAGATATTTGACTTGTaGAGTCACCACATGGGTGGCAGCCCCAGTTGTCATTGCGCTGAT +
Preference number: 5 (lower is better)
Translates to: SGYIWHFHSQEIFDL*SHHMGGSPSCHCAD
Trigger: ATCAGCGCAATGACAACTGGGGCTGCCACCCATGTGGTGACTTCACAAGTCAAATATCTCTTGGGAATGAAAATGCCATATATATCCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000520818.5
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS TCA 90 bp CAAGTGGTCCGGATATATATGGCATTTTCATTCCCAAGAGATATTTaGCTTGTGAAGTCACCACATGGGTGGCAGCCCCAGTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: QVVRIYMAFSFPRDI*LVKSPHGWQPQLSL
Trigger: CAATGACAACTGGGGCTGCCACCCATGTGGTGACTTCACAAGTCAAATATCTCTTGGGAATGAAAATGCCATATATATCCGGACCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000520818.5
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCAGCAAAGGCCAATCCTaGGGTCACCTGTTGAACTGC +
Preference number: 5 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPISKGQS*GHLLNC
Trigger: GCAGTTCAACAGGTGACCCAAGGATTGGCCTTTGCT...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTAATCCGTTCCACGGCGTaGGCTGATATTAAGGATGTC +
Preference number: 5 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLIRSTA*ADIKDV
Trigger: GACATCCTTAATATCAGCCAACGCCGTGGAACGGAT...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGAACAGCAGTCCCACATaGGCAGCAAAGCATATTGTA +
Preference number: 5 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLNSSPT*AAKHIV
Trigger: TACAATATGCTTTGCTGCCAATGTGGGACTGCTGTT...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTAACAGCAGTCCCACATaGGCAGCAAAGCATATTGTA +
Preference number: 5 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTNSSPT*AAKHIV
Trigger: TACAATATGCTTTGCTGCCAATGTGGGACTGCTGTT...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGTTACAGTCATTGCTCTaGGGAAGCGTCCTATCACTA +
Preference number: 5 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLLQSLL*GSVLSL
Trigger: TAGTGATAGGACGCTTCCCAAGAGCAATGACTGTAA...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AAGCTCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCTTACAGTCATTGCTCTaGGGAAGCGTCCTATCACTA +
Preference number: 5 (lower is better)
Translates to: KLSELHTRDFLQVNSHCSLQSLL*GSVLSL
Trigger: TAGTGATAGGACGCTTCCCAAGAGCAATGACTGTAA...GCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTTATACTTACAGTCATaGCTCTTGGGAAGCGTCCTA +
Preference number: 5 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSLYLQS*LLGSVL
Trigger: TAGGACGCTTCCCAAGAGCAATGACTGTAAGTATAA...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTTTATACTTACAGTCATaGCTCTTGGGAAGCGTCCTA +
Preference number: 5 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCLYLQS*LLGSVL
Trigger: TAGGACGCTTCCCAAGAGCAATGACTGTAAGTATAA...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCGTGTTTTGTTCACACTaGCTGATATCATCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSVFCSH*LISSSG
Trigger: GCCACTTGATGATATCAGCAAGTGTGAACAAAACAC...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTGTGTTTTGTTCACACTaGCTGATATCATCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCVFCSH*LISSSG
Trigger: GCCACTTGATGATATCAGCAAGTGTGAACAAAACAC...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGTGTGAAGCTTCTTCATaGCAGTTGCCATTGGATAGG +
Preference number: 5 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLCEASS*QLPLDR
Trigger: CCTATCCAATGGCAACTGCAATGAAGAAGCTTCACA...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCTCCTTGGGTCACCTGTaGAACTGCCAACATTATCCC +
Preference number: 5 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPISLGHL*NCQHYP
Trigger: GGGATAATGTTGGCAGTTCAACAGGTGACCCAAGGA...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGAATGAAGAAACTATATaGCTGAGGCCATGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: SQNSIPETSSRLTVIVALNEETI*LRPWAK
Trigger: TTTGGCCCATGGCCTCAGCAATATAGTTTCTTCATT...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTACCATGGCAGCAGCACTaGGTATGCAGAAGAAAAATG +
Preference number: 5 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLPWQQH*VCRRKM
Trigger: CATTTTTCTTCTGCATACCAAGTGCTGCTGCCATGG...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGTTATACTTACAGTCATaGCTCTTGGGAAGCGTCCTA +
Preference number: 5 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLLYLQS*LLGSVL
Trigger: TAGGACGCTTCCCAAGAGCAATGACTGTAAGTATAA...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GCGTCCTATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTCCCACATTTGTGAAGCTTCTTCATaGCAGTTGCCATTGGATAGG +
Preference number: 5 (lower is better)
Translates to: ASYHYSYGTNNTKQQSHICEASS*QLPLDR
Trigger: CCTATCCAATGGCAACTGCAATGAAGAAGCTTCACA...AATGTGGGACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGATAGGACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CAA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCTGTGAAGCTTCTTCATaGCAGTTGCCATTGGATAGG +
Preference number: 5 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSCEASS*QLPLDR
Trigger: CCTATCCAATGGCAACTGCAATGAAGAAGCTTCACA...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGTACTTCTGCTTTTCCTaGGAAGAGTGTTTGATGGGA +
Preference number: 5 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLYFCFS*EECLMG
Trigger: TCCCATCAAACACTCTTCCAAGGAAAAGCAGAAGTA...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGCACTTAACTCCCTATTaGAAATCTGGCCACAAACTC +
Preference number: 5 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLHLTPY*KSGHKL
Trigger: GAGTTTGTGGCCAGATTTCAAATAGGGAGTTAAGTG...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS GCA 90 bp AGACACAGTGTCTGGAAGCAAGTTTTCTTTCAGATTGTAATGTGGTaGCCAATCCAAAATGGGCAGTCGCCTTCTACACCACTGTATAAT +
Preference number: 5 (lower is better)
Translates to: RHSVWKQVFFQIVMW*PIQNGQSPSTPLYN
Trigger: ATTATACAGTGGTGTAGAAGGCGACTGCCCATTTTGGATTGGGCACCACATTACAATCTGAAAGAAAACTTGCTTCCAGACACTGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000522181.5
ENST00000522862.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTTCCTTGGGTCACCTGTaGAACTGCCAACATTATCCC +
Preference number: 5 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVSLGHL*NCQHYP
Trigger: GGGATAATGTTGGCAGTTCAACAGGTGACCCAAGGA...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTATCCGTTCCACGGCGTaGGCTGATATTAAGGATGTC +
Preference number: 5 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVIRSTA*ADIKDV
Trigger: GACATCCTTAATATCAGCCAACGCCGTGGAACGGAT...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTATTCCCAAGAGATATTaGACTTGTGAAGTCACCACA +
Preference number: 5 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTIPKRY*TCEVTT
Trigger: TGTGGTGACTTCACAAGTCAAATATCTCTTGGGAAT...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGATTCCCAAGAGATATTaGACTTGTGAAGTCACCACA +
Preference number: 5 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLIPKRY*TCEVTT
Trigger: TGTGGTGACTTCACAAGTCAAATATCTCTTGGGAAT...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAATGAAGAAACTATATaGCTGAGGCCATGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDNEETI*LRPWAK
Trigger: TTTGGCCCATGGCCTCAGCAATATAGTTTCTTCATT...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp TTTATCAAGGAAGCTGTACAATGGGCTAACAATACATCCACACTCCTGCCTTTACCATGGCAGCAGCACTaGGTATGCAGAAGAAAAATG +
Preference number: 5 (lower is better)
Translates to: FIKEAVQWANNTSTLLPLPWQQH*VCRRKM
Trigger: CATTTTTCTTCTGCATACCAAGTGCTGCTGCCATGG...TAAAGGCAGGAGTGTGGATGTATTGTTAGCCCATTGTACAGCTTCCTTGATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CAA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTATTACAGTCATTGCTCTaGGGAAGCGTCCTATCACTA +
Preference number: 5 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLLQSLL*GSVLSL
Trigger: TAGTGATAGGACGCTTCCCAAGAGCAATGACTGTAA...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CTTGGGAAGCGTCCTATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTTTATACTTACAGTCATaGCTCTTGGGAAGCGTCCTA +
Preference number: 5 (lower is better)
Translates to: LGKRPITIAMVQTTPNSSLYLQS*LLGSVL
Trigger: TAGGACGCTTCCCAAGAGCAATGACTGTAAGTATAA...ACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGATAGGACGCTTCCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CAA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCGTGTTTTGTTCACACTaGCTGATATCATCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSVFCSH*LISSSG
Trigger: GCCACTTGATGATATCAGCAAGTGTGAACAAAACAC...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTAATGGATATGACTTATaGCAGCAGATACCGATTCAA +
Preference number: 5 (lower is better)
Translates to: VQNASIWPLQAVGKDKSCNGYDL*QQIPIQ
Trigger: TTGAATCGGTATCTGCTGCAATAAGTCATATCCATT...ACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCTACTTCTGCTTTTCCTaGGAAGAGTGTTTGATGGGA +
Preference number: 5 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSYFCFS*EECLMG
Trigger: TCCCATCAAACACTCTTCCAAGGAAAAGCAGAAGTA...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTACACAGTTTTTGTGTaGTCAATGCCTGCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: VVQNASIWPLQAVGKDKSYTVFV*SMPASK
Trigger: TTTTGAAGCAGGCATTGACAACACAAAAACTGTGTA...GCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACCACTTAACTCCCTATTaGAAATCTGGCCACAAACTC +
Preference number: 5 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDHLTPY*KSGHKL
Trigger: GAGTTTGTGGCCAGATTTCAAATAGGGAGTTAAGTG...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GCGTCCTATCACTATAGCTATGGTACAAACAACACCAAACAGCAGTCCCACATTATTCCCAAGAGATATTaGACTTGTGAAGTCACCACA +
Preference number: 5 (lower is better)
Translates to: ASYHYSYGTNNTKQQSHIIPKRY*TCEVTT
Trigger: TGTGGTGACTTCACAAGTCAAATATCTCTTGGGAAT...AATGTGGGACTGCTGTTTGGTGTTGTTTGTACCATAGCTATAGTGATAGGACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CAA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCATTCCCAAGAGATATTaGACTTGTGAAGTCACCACA +
Preference number: 5 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSIPKRY*TCEVTT
Trigger: TGTGGTGACTTCACAAGTCAAATATCTCTTGGGAAT...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTAAATGAAGAAACTATATaGCTGAGGCCATGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLNEETI*LRPWAK
Trigger: TTTGGCCCATGGCCTCAGCAATATAGTTTCTTCATT...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CTTGTGTGTCTAAACTCATGTTTAGCTCTTAAGCTCTCAGAACTCCATACCAGAAACAGCAGTCCCACATaGGCAGCAAAGCATATTGTA +
Preference number: 5 (lower is better)
Translates to: LVCLNSCLALKLSELHTRNSSPT*AAKHIV
Trigger: TACAATATGCTTTGCTGCCAATGTGGGACTGCTGTT...TCTGGTATGGAGTTCTGAGAGCTTAAGAGCTAAACATGAGTTTAGACACACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CATACTGTTCTGATTGTATACAATAGGGATGACTCTGCGAGGCACCAAATGTTATTACAGTCATTGCTCTaGGGAAGCGTCCTATCACTA +
Preference number: 5 (lower is better)
Translates to: HTVLIVYNRDDSARHQMLLQSLL*GSVLSL
Trigger: TAGTGATAGGACGCTTCCCAAGAGCAATGACTGTAA...TAACATTTGGTGCCTCGCAGAGTCATCCCTATTGTATACAATCAGAACAGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp CTTGTGTGTCTAAACTCATGTTTAGCTCTTAAGCTCTCAGAACTCCATACCAGATTACAGTCATTGCTCTaGGGAAGCGTCCTATCACTA +
Preference number: 5 (lower is better)
Translates to: LVCLNSCLALKLSELHTRLQSLL*GSVLSL
Trigger: TAGTGATAGGACGCTTCCCAAGAGCAATGACTGTAA...TCTGGTATGGAGTTCTGAGAGCTTAAGAGCTAAACATGAGTTTAGACACACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTTTCCATAATACGTCATaGCTTTTATCAAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTFHNTS*LLSRKL
Trigger: CAGCTTCCTTGATAAAAGCAATGACGTATTATGGAA...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGAATGGATATGACTTATaGCAGCAGATACCGATTCAA +
Preference number: 5 (lower is better)
Translates to: SQNSIPETSSRLTVIVALNGYDL*QQIPIQ
Trigger: TTGAATCGGTATCTGCTGCAATAAGTCATATCCATT...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGAATGGATATGACTTATaGCAGCAGATACCGATTCAA +
Preference number: 5 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLNGYDL*QQIPIQ
Trigger: TTGAATCGGTATCTGCTGCAATAAGTCATATCCATT...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTAGAACTTGGTTTTATTaGGATACCCGTTTCTTTCGA +
Preference number: 5 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTRTWFY*DTRFFR
Trigger: TCGAAAGAAACGGGTATCCAAATAAAACCAAGTTCT...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276609.8
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCGCCTATGGCGTTTATTaGTCAATTATCCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSAYGVY*SIILLV
Trigger: AACCAACAGGATAATTGACAAATAAACGCCATAGGC...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp TCTCAGAACTCCATACCAGAGACTTCCTCCAGGTTAACAGTCATTGTAGCCTTGTTGACCCCCAAGTTATaGGACTTAAAGTTTTATCCA +
Preference number: 5 (lower is better)
Translates to: SQNSIPETSSRLTVIVALLTPKL*DLKFYP
Trigger: TGGATAAAACTTTAAGTCCAATAACTTGGGGGTCAA...CAAGGCTACAATGACTGTTAACCTGGAGGAAGTCTCTGGTATGGAGTTCTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTTTGACCCCCAAGTTATaGGACTTAAAGTTTTATCCA +
Preference number: 5 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTLTPKL*DLKFYP
Trigger: TGGATAAAACTTTAAGTCCAATAACTTGGGGGTCAA...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTCATAAGGTACATGGTTaGGTCTTCCTTTACATTGAA +
Preference number: 5 (lower is better)
Translates to: QNASIWPLQAVGKDKSCTHKVHG*VFLYIE
Trigger: TTCAATGTAAAGGAAGACCAAACCATGTACCTTATG...AGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACAAGAGCTGTACTGTACACAGTTTTTGTGTaGTCAATGCCTGCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: KMPAYGLFRQLVKTRAVLYTVFV*SMPASK
Trigger: TTTTGAAGCAGGCATTGACAACACAAAAACTGTGTA...CAGTACAGCTCTTGTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAGGGTTCAGTGTTAAGTaGGTCTACAGCTCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: ALDSTNSISKDGNISLEAGFSVK*VYSSLA
Trigger: GGCGAGAGAGCTGTAGACCAACTTAACACTGAACCC...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCAGAGCGGTGGCATTGTaGGAAGATCCAAGTTATCAA +
Preference number: 5 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPIRAVAL*EDPSYQ
Trigger: TTGATAACTTGGATCTTCCAACAATGCCACCGCTCT...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAATCCGTTCCACGGCGTaGGCTGATATTAAGGATGTC +
Preference number: 5 (lower is better)
Translates to: ALDSTNSISKDGNISLEAIRSTA*ADIKDV
Trigger: GACATCCTTAATATCAGCCAACGCCGTGGAACGGAT...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp TTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCCATAATGAAGAAACTATATaGCTGAGGCCATGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: FHLLQGFTVHFCLHFKFHNEETI*LRPWAK
Trigger: TTTGGCCCATGGCCTCAGCAATATAGTTTCTTCATT...ATGGAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CAA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAAACAGCAGTCCCACATaGGCAGCAAAGCATATTGTA +
Preference number: 5 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVANSSPT*AAKHIV
Trigger: TACAATATGCTTTGCTGCCAATGTGGGACTGCTGTT...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCATTACAGTCATTGCTCTaGGGAAGCGTCCTATCACTA +
Preference number: 5 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVALQSLL*GSVLSL
Trigger: TAGTGATAGGACGCTTCCCAAGAGCAATGACTGTAA...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCGTGTTTTGTTCACACTaGCTGATATCATCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPIVFCSH*LISSSG
Trigger: GCCACTTGATGATATCAGCAAGTGTGAACAAAACAC...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCTTCCATAATACGTCATaGCTTTTATCAAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSFHNTS*LLSRKL
Trigger: CAGCTTCCTTGATAAAAGCAATGACGTATTATGGAA...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAATGGATATGACTTATaGCAGCAGATACCGATTCAA +
Preference number: 5 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSNGYDL*QQIPIQ
Trigger: TTGAATCGGTATCTGCTGCAATAAGTCATATCCATT...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAGAACTTGGTTTTATTaGGATACCCGTTTCTTTCGA +
Preference number: 5 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSRTWFY*DTRFFR
Trigger: TCGAAAGAAACGGGTATCCAAATAAAACCAAGTTCT...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp TTCCTTGGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCTTAAAATTAGAGCTATaGGGTCTGAAGATCCTAAGC +
Preference number: 5 (lower is better)
Translates to: FLGRVFDGNVSWPHSFQSLKLEL*GLKILS
Trigger: GCTTAGGATCTTCAGACCCAATAGCTCTAATTTTAA...GGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCCAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CAAAAAGTTGTGCAAAATGCCAGCATATGGCCTCTTCAGGCAGTTGGTAAAGACTTAAAATTAGAGCTATaGGGTCTGAAGATCCTAAGC +
Preference number: 5 (lower is better)
Translates to: QKVVQNASIWPLQAVGKDLKLEL*GLKILS
Trigger: GCTTAGGATCTTCAGACCCAATAGCTCTAATTTTAA...GTCTTTACCAACTGCCTGAAGAGGCCATATGCTGGCATTTTGCACAACTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CTTGTGTGTCTAAACTCATGTTTAGCTCTTAAGCTCTCAGAACTCCATACCAGAATTCCCAAGAGATATTaGACTTGTGAAGTCACCACA +
Preference number: 5 (lower is better)
Translates to: LVCLNSCLALKLSELHTRIPKRY*TCEVTT
Trigger: TGTGGTGACTTCACAAGTCAAATATCTCTTGGGAAT...TCTGGTATGGAGTTCTGAGAGCTTAAGAGCTAAACATGAGTTTAGACACACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTAATGAAGAAACTATATaGCTGAGGCCATGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVNEETI*LRPWAK
Trigger: TTTGGCCCATGGCCTCAGCAATATAGTTTCTTCATT...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGACCATGGCAGCAGCACTaGGTATGCAGAAGAAAAATG +
Preference number: 5 (lower is better)
Translates to: NSISKDGNISLEARYQSRPWQQH*VCRRKM
Trigger: CATTTTTCTTCTGCATACCAAGTGCTGCTGCCATGG...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp AGTTCATCTTATACTGGAATAGCACAAAGCTATTCTGCTAGTGGTATTTTCTCACCATGGCAGCAGCACTaGGTATGCAGAAGAAAAATG +
Preference number: 5 (lower is better)
Translates to: SSSYTGIAQSYSASGIFSPWQQH*VCRRKM
Trigger: CATTTTTCTTCTGCATACCAAGTGCTGCTGCCATGG...TGAGAAAATACCACTAGCAGAATAGCTTTGTGCTATTCCAGTATAAGATGAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCATTATACTTACAGTCATaGCTCTTGGGAAGCGTCCTA +
Preference number: 5 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVALYLQS*LLGSVL
Trigger: TAGGACGCTTCCCAAGAGCAATGACTGTAAGTATAA...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTTGTGAAGCTTCTTCATaGCAGTTGCCATTGGATAGG +
Preference number: 5 (lower is better)
Translates to: ILSISNIHSKTDQCQELGCEASS*QLPLDR
Trigger: CCTATCCAATGGCAACTGCAATGAAGAAGCTTCACA...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTAAATGGATATGACTTATaGCAGCAGATACCGATTCAA +
Preference number: 5 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLNGYDL*QQIPIQ
Trigger: TTGAATCGGTATCTGCTGCAATAAGTCATATCCATT...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CTTGTGTGTCTAAACTCATGTTTAGCTCTTAAGCTCTCAGAACTCCATACCAGAGCCTATGGCGTTTATTaGTCAATTATCCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: LVCLNSCLALKLSELHTRAYGVY*SIILLV
Trigger: AACCAACAGGATAATTGACAAATAAACGCCATAGGC...TCTGGTATGGAGTTCTGAGAGCTTAAGAGCTAAACATGAGTTTAGACACACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTACATAAGGTACATGGTTaGGTCTTCCTTTACATTGAA +
Preference number: 5 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLHKVHG*VFLYIE
Trigger: TTCAATGTAAAGGAAGACCAAACCATGTACCTTATG...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GGAAGAGTGTTTGATGGGAATGTGAGTTGGCCTCACTCATTTCAATCCAAGTTATACACAGTTTTTGTGTaGTCAATGCCTGCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: GRVFDGNVSWPHSFQSKLYTVFV*SMPASK
Trigger: TTTTGAAGCAGGCATTGACAACACAAAAACTGTGTA...TAACTTGGATTGAAATGAGTGAGGCCAACTCACATTCCCATCAAACACTCTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AACATACAGTTCAGCCTAGCCTATGGCGTTTATTTGTCAATTATCCTGTTGGTTACCACTACACAGTTTTaGTGTTGTCAATGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: NIQFSLAYGVYLSIILLVTTTQF*CCQCLL
Trigger: AAGCAGGCATTGACAACACAAAAACTGTGTAGTGGT...AACCAACAGGATAATTGACAAATAAACGCCATAGGCTAGGCTGAACTGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCAACCACTACACAGTTTTaGTGTTGTCAATGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVATTTQF*CCQCLL
Trigger: AAGCAGGCATTGACAACACAAAAACTGTGTAGTGGT...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCACTCAGAGCGGTGGCATaGTTGGAAGATCCAAGTTAT +
Preference number: 5 (lower is better)
Translates to: ALDSTNSISKDGNISLEALRAVA*LEDPSY
Trigger: ATAACTTGGATCTTCCAACAATGCCACCGCTCTGAG...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAACAGCAGTCCCACATaGGCAGCAAAGCATATTGTA +
Preference number: 5 (lower is better)
Translates to: ALDSTNSISKDGNISLEANSSPT*AAKHIV
Trigger: TACAATATGCTTTGCTGCCAATGTGGGACTGCTGTT...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTGTGTTTTGTTCACACTaGCTGATATCATCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: ILSISNIHSKTDQCQELGVFCSH*LISSSG
Trigger: GCCACTTGATGATATCAGCAAGTGTGAACAAAACAC...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCATGTGAAGCTTCTTCATaGCAGTTGCCATTGGATAGG +
Preference number: 5 (lower is better)
Translates to: ALDSTNSISKDGNISLEACEASS*QLPLDR
Trigger: CCTATCCAATGGCAACTGCAATGAAGAAGCTTCACA...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp GAAGCATTTGTTGTACAAGTAAGCAGTTTGCAAATGATAGGCAACCACCCAATCAATGGATATGACTTATaGCAGCAGATACCGATTCAA +
Preference number: 5 (lower is better)
Translates to: EAFVVQVSSLQMIGNHPINGYDL*QQIPIQ
Trigger: TTGAATCGGTATCTGCTGCAATAAGTCATATCCATT...GATTGGGTGGTTGCCTATCATTTGCAAACTGCTTACTTGTACAACAAATGCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp CTTGTGTGTCTAAACTCATGTTTAGCTCTTAAGCTCTCAGAACTCCATACCAGATTGACCCCCAAGTTATaGGACTTAAAGTTTTATCCA +
Preference number: 5 (lower is better)
Translates to: LVCLNSCLALKLSELHTRLTPKL*DLKFYP
Trigger: TGGATAAAACTTTAAGTCCAATAACTTGGGGGTCAA...TCTGGTATGGAGTTCTGAGAGCTTAAGAGCTAAACATGAGTTTAGACACACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTCACTTAACTCCCTATTaGAAATCTGGCCACAAACTC +
Preference number: 5 (lower is better)
Translates to: ILSISNIHSKTDQCQELGHLTPY*KSGHKL
Trigger: GAGTTTGTGGCCAGATTTCAAATAGGGAGTTAAGTG...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGAAATGAAGAAACTATATaGCTGAGGCCATGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: NSISKDGNISLEARYQSRNEETI*LRPWAK
Trigger: TTTGGCCCATGGCCTCAGCAATATAGTTTCTTCATT...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCATTATACTTACAGTCATaGCTCTTGGGAAGCGTCCTA +
Preference number: 5 (lower is better)
Translates to: ALDSTNSISKDGNISLEALYLQS*LLGSVL
Trigger: TAGGACGCTTCCCAAGAGCAATGACTGTAAGTATAA...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp AATTTTCACCTGCTGCAGGGTTTCACTGTCCATTTCTGTCTTCACTTTAAATTCTTCCATAATACGTCATaGCTTTTATCAAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: NFHLLQGFTVHFCLHFKFFHNTS*LLSRKL
Trigger: CAGCTTCCTTGATAAAAGCAATGACGTATTATGGAA...GAATTTAAAGTGAAGACAGAAATGGACAGTGAAACCCTGCAGCAGGTGAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522181.5
CDS-3UTR CAA 90 bp CAGTTCTTTCCAACTGCTATGCAGTTACTAAGTCACATCGTACTTATTGTAGCATTCCATAATACGTCATaGCTTTTATCAAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: QFFPTAMQLLSHIVLIVAFHNTS*LLSRKL
Trigger: CAGCTTCCTTGATAAAAGCAATGACGTATTATGGAA...TGCTACAATAAGTACGATGTGACTTAGTAACTGCATAGCAGTTGGAAAGAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276609.8
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AGTTCATCTTATACTGGAATAGCACAAAGCTATTCTGCTAGTGGTATTTTCTCATACTTCTGCTTTTCCTaGGAAGAGTGTTTGATGGGA +
Preference number: 5 (lower is better)
Translates to: SSSYTGIAQSYSASGIFSYFCFS*EECLMG
Trigger: TCCCATCAAACACTCTTCCAAGGAAAAGCAGAAGTA...TGAGAAAATACCACTAGCAGAATAGCTTTGTGCTATTCCAGTATAAGATGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAAGATATCAGAGCAGAGTACAAGTAAGCAGTTaGCAAATGATAGGCAACCAC +
Preference number: 5 (lower is better)
Translates to: NSISKDGNISLEARYQSRVQVSS*QMIGNH
Trigger: GTGGTTGCCTATCATTTGCAAACTGCTTACTTGTAC...TCTGCTCTGATATCTTGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCAATTCCCAAGAGATATTaGACTTGTGAAGTCACCACA +
Preference number: 5 (lower is better)
Translates to: ALDSTNSISKDGNISLEAIPKRY*TCEVTT
Trigger: TGTGGTGACTTCACAAGTCAAATATCTCTTGGGAAT...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp GGCCATATGAATGTTTACCACACATTTGCTAGAGACCATTATAATCCATCACTTTTCCATAATACGTCATaGCTTTTATCAAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GHMNVYHTFARDHYNPSLFHNTS*LLSRKL
Trigger: CAGCTTCCTTGATAAAAGCAATGACGTATTATGGAA...AAGTGATGGATTATAATGGTCTCTAGCAAATGTGTGGTAAACATTCATATGGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTAGAACTTGGTTTTATTaGGATACCCGTTTCTTTCGA +
Preference number: 5 (lower is better)
Translates to: ILSISNIHSKTDQCQELGRTWFY*DTRFFR
Trigger: TCGAAAGAAACGGGTATCCAAATAAAACCAAGTTCT...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp AGTTCATCTTATACTGGAATAGCACAAAGCTATTCTGCTAGTGGTATTTTCTCAGCCTATGGCGTTTATTaGTCAATTATCCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: SSSYTGIAQSYSASGIFSAYGVY*SIILLV
Trigger: AACCAACAGGATAATTGACAAATAAACGCCATAGGC...TGAGAAAATACCACTAGCAGAATAGCTTTGTGCTATTCCAGTATAAGATGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp ATCCTAAGCATTTCCAATATTCACAGCAAAACAGACCAATGTCAAGAACTTGGTCATAAGGTACATGGTTaGGTCTTCCTTTACATTGAA +
Preference number: 5 (lower is better)
Translates to: ILSISNIHSKTDQCQELGHKVHG*VFLYIE
Trigger: TTCAATGTAAAGGAAGACCAAACCATGTACCTTATG...ACCAAGTTCTTGACATTGGTCTGTTTTGCTGTGAATATTGGAAATGCTTAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS-3UTR CAA 90 bp GCACTAGATTCTACAAATAGTATTTCCAAAGATGGCAATATAAGCTTAGAGGCATTCCATAATACGTCATaGCTTTTATCAAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: ALDSTNSISKDGNISLEAFHNTS*LLSRKL
Trigger: CAGCTTCCTTGATAAAAGCAATGACGTATTATGGAA...TGCCTCTAAGCTTATATTGCCATCTTTGGAAATACTATTTGTAGAATCTAGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS-3UTR CAA 90 bp AGTTCATCTTATACTGGAATAGCACAAAGCTATTCTGCTAGTGGTATTTTCTCAAGAACTTGGTTTTATTaGGATACCCGTTTCTTTCGA +
Preference number: 5 (lower is better)
Translates to: SSSYTGIAQSYSASGIFSRTWFY*DTRFFR
Trigger: TCGAAAGAAACGGGTATCCAAATAAAACCAAGTTCT...TGAGAAAATACCACTAGCAGAATAGCTTTGTGCTATTCCAGTATAAGATGAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276609.8
ENST00000617078.3
ENST00000617233.2
CDS CCA 72 bp GATCTGGGAGTGCACAGTGCAATGATACAACTGGAGTaGAGAGGGACTGGGGGCACACTCCACCTGGTTGTC +
Preference number: 6 (lower is better)
Translates to: DLGVHSAMIQLE*RGTGGTLHLVV
Trigger: GACAACCAGGTGGAGTGTGCCCCCAGTCCCTCTCCACTCCAGTTGTATCATTGCACTGTGCACTCCCAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520818.5
CDS TCA 72 bp CCACATAGCCTACAAGTGCCACTCCGAAAGCTTCAGTaGTCACCGCAGAGAGGATGTTCATCGGGGGAGCTC +
Preference number: 6 (lower is better)
Translates to: PHSLQVPLRKLQ*SPQRGCSSGEL
Trigger: GAGCTCCCCCGATGAACATCCTCTCTGCGGTGATCACTGAAGCTTTCGGAGTGGCACTTGTAGGCTATGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000520818.5
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS TCA 72 bp CGGATAAGCCCAGCACGCTTGTGTTACTCTGTGTGGTaGGATTCTGCATGTTCTGAGGGACAATCCGTTCCA +
Preference number: 6 (lower is better)
Translates to: RISPARLCYSVW*DSACSEGQSVP
Trigger: TGGAACGGATTGTCCCTCAGAACATGCAGAATCTCACCACACAGAGTAACACAAGCGTGCTGGGCTTATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000522181.5
ENST00000522862.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS GCA 72 bp CCCAAGAAGGAAACTGCTGCAGCAACGTGGATCCTTTaGATTTCAAAGTCGGATAAGCCCAGCACGCTTGTG +
Preference number: 6 (lower is better)
Translates to: PKKETAAATWIL*ISKSDKPSTLV
Trigger: CACAAGCGTGCTGGGCTTATCCGACTTTGAAATGCAAAGGATCCACGTTGCTGCAGCAGTTTCCTTCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000522181.5
ENST00000522862.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS CCA 72 bp TCTGCATGTTCTGAGGGACAATCCGTTCCACGGCGTTaGCTGATATTAAGGATGTCAAGGCAAAGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: SACSEGQSVPRR*LILRMSRQRCL
Trigger: CAGGCACCTTTGCCTTGACATCCTTAATATCAGCCAACGCCGTGGAACGGATTGTCCCTCAGAACATGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000522181.5
ENST00000522862.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS TCA 72 bp GAGAGAACAGCAAAGGCCAATCCTTGGGTCACCTGTTaGACTGCCAACATTATCCCAGACACAGTGTCTGGA +
Preference number: 6 (lower is better)
Translates to: ERTAKANPWVTC*TANIIPDTVSG
Trigger: TCCAGACACTGTGTCTGGGATAATGTTGGCAGTTCAACAGGTGACCCAAGGATTGGCCTTTGCTGTTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000522181.5
ENST00000522862.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS TCA 72 bp TTCATCATTTTTAGGATCTGGGAGTGCACAGTGCAATaGTACAACTGGAGTGGAGAGGGACTGGGGGCACAC +
Preference number: 6 (lower is better)
Translates to: FIIFRIWECTVQ*YNWSGEGLGAH
Trigger: GTGTGCCCCCAGTCCCTCTCCACTCCAGTTGTATCATTGCACTGTGCACTCCCAGATCCTAAAAATGATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520818.5
CDS CCA 72 bp ATCACACCTCCCAAGAAGGAAACTGCTGCAGCAACGTaGATCCTTTGCATTTCAAAGTCGGATAAGCCCAGC +
Preference number: 6 (lower is better)
Translates to: ITPPKKETAAAT*ILCISKSDKPS
Trigger: GCTGGGCTTATCCGACTTTGAAATGCAAAGGATCCACGTTGCTGCAGCAGTTTCCTTCTTGGGAGGTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000520818.5
ENST00000522181.5
ENST00000522862.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS TCA 72 bp CTTGTGTTACTCTGTGTGGTGAGATTCTGCATGTTCTaGGGGACAATCCGTTCCACGGCGTTGGCTGATATT +
Preference number: 6 (lower is better)
Translates to: LVLLCVVRFCMF*GTIRSTALADI
Trigger: AATATCAGCCAACGCCGTGGAACGGATTGTCCCTCAGAACATGCAGAATCTCACCACACAGAGTAACACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000522181.5
ENST00000522862.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS GCA 72 bp AACAGCAAAGGCCAATCCTTGGGTCACCTGTTGAACTaGCAACATTATCCCAGACACAGTGTCTGGAAGCAA +
Preference number: 6 (lower is better)
Translates to: NSKGQSLGHLLN*QHYPRHSVWKQ
Trigger: TTGCTTCCAGACACTGTGTCTGGGATAATGTTGGCAGTTCAACAGGTGACCCAAGGATTGGCCTTTGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000522181.5
ENST00000522862.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS GCA 72 bp GCAGGAAACAGAGACCCATATAAACCAAACACTGGGTaGACAGATGAGAGAACAGCAAAGGCCAATCCTTGG +
Preference number: 6 (lower is better)
Translates to: AGNRDPYKPNTG*TDERTAKANPW
Trigger: CCAAGGATTGGCCTTTGCTGTTCTCTCATCTGTGCACCCAGTGTTTGGTTTATATGGGTCTCTGTTTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000522181.5
ENST00000522862.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS CCA 72 bp ATTCCCAAGAGATATTTGACTTGTGAAGTCACCACATaGGTGGCAGCCCCAGTTGTCATTGCGCTGATCACA +
Preference number: 6 (lower is better)
Translates to: IPKRYLTCEVTT*VAAPVVIALIT
Trigger: TGTGATCAGCGCAATGACAACTGGGGCTGCCACCCATGTGGTGACTTCACAAGTCAAATATCTCTTGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000520818.5
ENST00000522181.5
ENST00000522862.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS GCA 72 bp ATAAGTTCATCATTTTTAGGATCTGGGAGTGCACAGTaGAATGATACAACTGGAGTGGAGAGGGACTGGGGG +
Preference number: 6 (lower is better)
Translates to: ISSSFLGSGSAQ*NDTTGVERDWG
Trigger: CCCCCAGTCCCTCTCCACTCCAGTTGTATCATTGCACTGTGCACTCCCAGATCCTAAAAATGATGAACTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520818.5
CDS CAA 90 bp CCAAGTGGTCCGGATATATATGGCATTTTCATTCCCAAGAGATATTaGACTTGTGAAGTCACCACATGGGTGGCAGCCCCAGTTGTCATT +
Preference number: 6 (lower is better)
Translates to: PSGPDIYGIFIPKRY*TCEVTTWVAAPVVI
Trigger: AATGACAACTGGGGCTGCCACCCATGTGGTGACTTCACAAGTCAAATATCTCTTGGGAATGAAAATGCCATATATATCCGGACCACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000520818.5
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS GCA 72 bp GTCTGGAAGCAAGTTTTCTTTCAGATTGTAATGTGGTaGCCAATCCAAAATGGGCAGTCGCCTTCTACACCA +
Preference number: 6 (lower is better)
Translates to: VWKQVFFQIVMW*PIQNGQSPSTP
Trigger: TGGTGTAGAAGGCGACTGCCCATTTTGGATTGGGCACCACATTACAATCTGAAAGAAAACTTGCTTCCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000522181.5
ENST00000522862.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS CAA 72 bp CCGGATATATATGGCATTTTCATTCCCAAGAGATATTaGACTTGTGAAGTCACCACATGGGTGGCAGCCCCA +
Preference number: 6 (lower is better)
Translates to: PDIYGIFIPKRY*TCEVTTWVAAP
Trigger: TGGGGCTGCCACCCATGTGGTGACTTCACAAGTCAAATATCTCTTGGGAATGAAAATGCCATATATATCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000520818.5
ENST00000522181.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS CAA 90 bp AGTTTGCAAATGATAGGCAACCACCCAATCCTCAGAGCGGTGGCATaGTTGGAAGATCCAAGTTATCAAACAACAGTTTATAACTGGCCT +
Preference number: 6 (lower is better)
Translates to: SLQMIGNHPILRAVA*LEDPSYQTTVYNWP
Trigger: AGGCCAGTTATAAACTGTTGTTTGATAACTTGGATCTTCCAACAATGCCACCGCTCTGAGGATTGGGTGGTTGCCTATCATTTGCAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS CCA 72 bp AGGTGCCTGTGGCAACATGATGTCCCATTCCAAATATaGCATAAATTATGGCAGGAAACAGAGACCCATATA +
Preference number: 6 (lower is better)
Translates to: RCLWQHDVPFQI*HKLWQETETHI
Trigger: TATATGGGTCTCTGTTTCCTGCCATAATTTATGCCATATTTGGAATGGGACATCATGTTGCCACAGGCACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276609.8
ENST00000309536.6
ENST00000522181.5
ENST00000522862.5
ENST00000523719.5
ENST00000617078.3
ENST00000617233.2
CDS CAA 72 bp ATGATAGGCAACCACCCAATCCTCAGAGCGGTGGCATaGTTGGAAGATCCAAGTTATCAAACAACAGTTTAT +
Preference number: 6 (lower is better)
Translates to: MIGNHPILRAVA*LEDPSYQTTVY
Trigger: ATAAACTGTTGTTTGATAACTTGGATCTTCCAACAATGCCACCGCTCTGAGGATTGGGTGGTTGCCTATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS CAA 90 bp TTGCAAATGATAGGCAACCACCCAATCCTCAGAGCGGTGGCATTGTaGGAAGATCCAAGTTATCAAACAACAGTTTATAACTGGCCTTAT +
Preference number: 6 (lower is better)
Translates to: LQMIGNHPILRAVAL*EDPSYQTTVYNWPY
Trigger: ATAAGGCCAGTTATAAACTGTTGTTTGATAACTTGGATCTTCCAACAATGCCACCGCTCTGAGGATTGGGTGGTTGCCTATCATTTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309536.6
CDS CCA 72 bp AACACCTCCTTTCAATGCCAAGCTCCAATTCGTCTGTaGTTTACAATGTCAAAGCTTGAATTCTTATCTGAA +
Preference number: 6 (lower is better)
Translates to: NTSFQCQAPIRL*FTMSKLEFLSE
Trigger: TTCAGATAAGAATTCAAGCTTTGACATTGTAAACCACAGACGAATTGGAGCTTGGCATTGAAAGGAGGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276609.8
ENST00000309536.6