RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC25A17 (Homo sapiens)

Ensembl gene IDs: ENSG00000100372

Ensembl transcript IDs: ENST00000263255.10, ENST00000402844.7, ENST00000412879.5, ENST00000420970.5, ENST00000426396.5, ENST00000427084.5, ENST00000430221.5, ENST00000434185.1, ENST00000434193.5, ENST00000435456.7, ENST00000443810.5, ENST00000447566.5, ENST00000449676.5, ENST00000458600.5, ENST00000491545.5, ENST00000544408.5

Found 436 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTTGCGTGCCCAGCAAGCTCTCAGCTTGTGGCAGTACTACCGTCTaGTGGACCACACTGAGCAACAGGACTCTAAGGAAGGTTTCCAAA +
Preference number: 1 (lower is better)
Translates to: GCVPSKLSACGSTTV*WTTLSNRTLRKVSK
Trigger: TTTGGAAACCTTCCTTAGAGTCCTGTTGCTCAGTGTGGTCCATCAGACGGTAGTACTGCCACAAGCTGAGAGCTTGCTGGGCACGCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
3UTR GCA 90 bp CGTCTGCAGGGGATAGGTCACCGTGGTGGCAATCGCTTTGGCTACTaGACCAATGATGAACACATCCAAGGAAGAAAGCTTCATCCGTTT +
Preference number: 1 (lower is better)
Translates to: RLQGIGHRGGNRFGY*TNDEHIQGRKLHPF
Trigger: AAACGGATGAAGCTTTCTTCCTTGGATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTGACCTATCCCCTGCAGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000430221.5
ENST00000447566.5
3UTR TCA 90 bp TCAAGGGAGAATCACTTCTCTTCACTCAGGAGGAAACCTCCCTCTTaGGCATCTTCGGAATTTTTCATGGGAAGGCGTCTCAGTGTTGGT +
Preference number: 1 (lower is better)
Translates to: SRENHFSSLRRKPPS*ASSEFFMGRRLSVG
Trigger: ACCAACACTGAGACGCCTTCCCATGAAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCTCCTGAGTGAAGAGAAGTGATTCTCCCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
3UTR CCA 90 bp AGTGTAGAAATAGACAAAATTGGAGCAGCAGAGACTGGAAATCACTaGAAACCACCCTCGATATGGTGCCAGGAGTCCTTCTTCTTTAAT +
Preference number: 1 (lower is better)
Translates to: SVEIDKIGAAETGNH*KPPSIWCQESFFFN
Trigger: ATTAAAGAAGAAGGACTCCTGGCACCATATCGAGGGTGGTTTCCAGTGATTTCCAGTCTCTGCTGCTCCAATTTTGTCTATTTCTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
3UTR GCA 90 bp GATACCTTTGTAGTTTGTTGGTACAATGTCTTCATTCCTAAATTTTaGTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGT +
Preference number: 1 (lower is better)
Translates to: DTFVVCWYNVFIPKF*SLKLQSGVYHPEWS
Trigger: ACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAATGAAGACATTGTACCAACAAACTACAAAGGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR CCA 90 bp GCGAATGATCTGATGAAAAGCATCAATGATACCTTTGTAGTTTGTTaGTACAATGTCTTCATTCCTAAATTTTGCTCCTTGAAGCTTCAG +
Preference number: 1 (lower is better)
Translates to: ANDLMKSINDTFVVC*YNVFIPKFCSLKLQ
Trigger: CTGAAGCTTCAAGGAGCAAAATTTAGGAATGAAGACATTGTACCAACAAACTACAAAGGTATCATTGATGCTTTTCATCAGATCATTCGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR CCA 90 bp GGTGACAACAGGTCCAGTTGGCCATACTCCCTGTGCACCCTTGGATGCTTTTCAGACAACAGGTCCAGTTaGCCATACTCCCTGTGCACC +
Preference number: 2 (lower is better)
Translates to: GDNRSSWPYSLCTLGCFSDNRSS*PYSLCT
Trigger: GGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTC...TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
3UTR-3UTR CCA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCGACAACAGGTCCAGTTaGCCATACTCCCTGTGCACC +
Preference number: 2 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPDNRSS*PYSLCT
Trigger: GGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTC...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
3UTR-3UTR TCA 90 bp CAGGGGTCCTATGGTCTCCTGAACTTTAATGTGGCTGTGAATCACCTGGGAATGCCCAAACCTCAGAATTaGCTGTACCGTCTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: QGSYGLLNFNVAVNHLGMPKPQN*LYRLQG
Trigger: CCCCTGCAGACGGTACAGTCAATTCTGAGGTTTGGG...CATTCCCAGGTGATTCACAGCCACATTAAAGTTCAGGAGACCATAGGACCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263255.10
3UTR-3UTR TCA 90 bp CAGGAGGAAACCTCCCTCTTGAGCATCTTCGGAATTTTTCATGGGAAGGCGTCTCCCAAACCTCAGAATTaGCTGTACCGTCTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: QEETSLLSIFGIFHGKASPKPQN*LYRLQG
Trigger: CCCCTGCAGACGGTACAGTCAATTCTGAGGTTTGGG...AGACGCCTTCCCATGAAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
3UTR-3UTR TCA 90 bp CAGGGGATAGGTCACCGTGGTGGCAATCGCTTTGGCTACTGCACCAATGATGAACCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCT +
Preference number: 2 (lower is better)
Translates to: QGIGHRGGNRFGYCTNDEPVVEC*PLTQSA
Trigger: AGCACTCTGGGTCAAAGGTCAACATTCTACCACTGG...TTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTGACCTATCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
3UTR-3UTR TCA 90 bp GTCACCGTGGTGGCAATCGCTTTGGCTACTGCACCAATGATGAACACATCCAAGGAAGACCAACAGCAATaGGGGAAATGTGCCATTCCA +
Preference number: 2 (lower is better)
Translates to: VTVVAIALATAPMMNTSKEDQQQ*GKCAIP
Trigger: TGGAATGGCACATTTCCCTCATTGCTGTTGGTCTTC...CTTGGATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
3UTR-3UTR TCA 90 bp CAGGAGGAAACCTCCCTCTTGAGCATCTTCGGAATTTTTCATGGGAAGGCGTCTACTGGATGGCAGGATTaGAGACCAACAGCAATGAGG +
Preference number: 2 (lower is better)
Translates to: QEETSLLSIFGIFHGKASTGWQD*RPTAMR
Trigger: CCTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGT...AGACGCCTTCCCATGAAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
3UTR-3UTR GCA 90 bp CAGGGGATAGGTCACCGTGGTGGCAATCGCTTTGGCTACTGCACCAATGATGAAGCAATGAGGGAAATGTaGCATTCCATAAAGCCGAGA +
Preference number: 2 (lower is better)
Translates to: QGIGHRGGNRFGYCTNDEAMREM*HSIKPR
Trigger: TCTCGGCTTTATGGAATGGCACATTTCCCTCATTGC...TTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTGACCTATCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
3UTR-3UTR CCA 90 bp TCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTATGGTCTCCGACAACAGGTCCAGTTaGCCATACTCCCTGTGCACC +
Preference number: 2 (lower is better)
Translates to: SIIETNHFFSWVRGPMVSDNRSS*PYSLCT
Trigger: GGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTC...GGAGACCATAGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
3UTR CAA 90 bp GTCAAGGGAGAATCACTTCTCTTCACTCAGGAGGAAACCTCCCTCTaGAGCATCTTCGGAATTTTTCATGGGAAGGCGTCTCAGTGTTGG +
Preference number: 2 (lower is better)
Translates to: VKGESLLFTQEETSL*SIFGIFHGKASQCW
Trigger: CCAACACTGAGACGCCTTCCCATGAAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCTCCTGAGTGAAGAGAAGTGATTCTCCCTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
3UTR-3UTR GCA 90 bp CACCGTGGTGGCAATCGCTTTGGCTACTGCACCAATGATGAACACATCCAAGGACACATTAACCACTCCTaGAACAAACCCAACTACCAG +
Preference number: 2 (lower is better)
Translates to: HRGGNRFGYCTNDEHIQGHINHS*NKPNYQ
Trigger: CTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTG...TCCTTGGATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
3UTR-3UTR TCA 90 bp CAGGGGTCCTATGGTCTCCTGAACTTTAATGTGGCTGTGAATCACCTGGGAATGAGGAAACCTCCCTCTTaGGCATCTTCGGAATTTTTC +
Preference number: 2 (lower is better)
Translates to: QGSYGLLNFNVAVNHLGMRKPPS*ASSEFF
Trigger: GAAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCT...CATTCCCAGGTGATTCACAGCCACATTAAAGTTCAGGAGACCATAGGACCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
3UTR-3UTR TCA 90 bp AACAGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCATCGCGACCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCT +
Preference number: 2 (lower is better)
Translates to: NSNEGNVPFHKAEIPSSRPVVEC*PLTQSA
Trigger: AGCACTCTGGGTCAAAGGTCAACATTCTACCACTGG...TCGCGATGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR GCA 90 bp GTCACCGTGGTGGCAATCGCTTTGGCTACTGCACCAATGATGAACACATCCAAGAATCGCTTTGGCTACTaGACCAATGATGAACACATC +
Preference number: 2 (lower is better)
Translates to: VTVVAIALATAPMMNTSKNRFGY*TNDEHI
Trigger: GATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATT...CTTGGATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
3UTR-3UTR TCA 90 bp TACCGTCTGATGGACCACACTGAGCAACAGGACTCTAAGGAAGGTTTCCAAATGTTATTGGGACTTGACTaGCCAGGGCTTGTAAGAATG +
Preference number: 2 (lower is better)
Translates to: YRLMDHTEQQDSKEGFQMLLGLD*PGLVRM
Trigger: CATTCTTACAAGCCCTGGTCAGTCAAGTCCCAATAA...CATTTGGAAACCTTCCTTAGAGTCCTGTTGCTCAGTGTGGTCCATCAGACGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
3UTR-3UTR TCA 90 bp ATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTACCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCT +
Preference number: 2 (lower is better)
Translates to: ILLLEASVWCLPPRVELLPVVEC*PLTQSA
Trigger: AGCACTCTGGGTCAAAGGTCAACATTCTACCACTGG...TAACAACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR TCA 90 bp AGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAACCCAACTACCAGACCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCT +
Preference number: 2 (lower is better)
Translates to: SGVVSNTLTTPATNPTTRPVVEC*PLTQSA
Trigger: AGCACTCTGGGTCAAAGGTCAACATTCTACCACTGG...TCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
3UTR-3UTR TCA 90 bp AAGACCAACAGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCACCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCT +
Preference number: 2 (lower is better)
Translates to: KTNSNEGNVPFHKAEIPSPVVEC*PLTQSA
Trigger: AGCACTCTGGGTCAAAGGTCAACATTCTACCACTGG...TGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCTGTTGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR TCA 90 bp TTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTACTGGATGGCAGGATTaGAGACCAACAGCAATGAGG +
Preference number: 2 (lower is better)
Translates to: LTTPATNPTTRSFPVVECTGWQD*RPTAMR
Trigger: CCTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGT...ACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR TCA 90 bp GTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTCTGCCCAAACCTCAGAATTaGCTGTACCGTCTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: VGEEDREYSEDFPMFCFLPKPQN*LYRLQG
Trigger: CCCCTGCAGACGGTACAGTCAATTCTGAGGTTTGGG...CAGAAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000430221.5
ENST00000447566.5
3UTR-3UTR CCA 90 bp ATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTGGAGCAGCAGAGACTaGAAATCACTGGAAACCACC +
Preference number: 2 (lower is better)
Translates to: INHSCNKPNYQIFSSGRMWSSRD*KSLETT
Trigger: GGTGGTTTCCAGTGATTTCCAGTCTCTGCTGCTCCA...CATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
3UTR-3UTR GCA 90 bp CGATATGGTGCCAGGAGTCCTTCTTCTTTAATGATCTCCAGGAGCACCATGTGTACCTTTGACCCAGAGTaGTTTGAGGCTATTAAAAGT +
Preference number: 2 (lower is better)
Translates to: RYGARSPSSLMISRSTMCTFDPE*FEAIKS
Trigger: ACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGT...ACACATGGTGCTCCTGGAGATCATTAAAGAAGAAGGACTCCTGGCACCATATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
3UTR-3UTR GCA 90 bp AGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAACCCAACTACCAGACACATTAACCACTCCTaGAACAAACCCAACTACCAG +
Preference number: 2 (lower is better)
Translates to: SGVVSNTLTTPATNPTTRHINHS*NKPNYQ
Trigger: CTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTG...TCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
3UTR-3UTR CCA 90 bp CATCCAAGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCTGCCGTTTTAAACCTTGATAGGTCACCGTGGTaGCAATCGCTTTGGCTACTG +
Preference number: 2 (lower is better)
Translates to: HPRKKASSVSLKAAVLNLDRSPW*QSLWLL
Trigger: CAGTAGCCAAAGCGATTGCCACCACGGTGACCTATC...AAGGTTTAAAACGGCAGCTTTTAAAGAAACGGATGAAGCTTTCTTCCTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
3UTR-3UTR TCA 90 bp ACAAAAATAAAGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAGGAAACCTCCCTCTTaGGCATCTTCGGAATTTTTC +
Preference number: 2 (lower is better)
Translates to: TKIKSCPWHSPNVSFREERKPPS*ASSEFF
Trigger: GAAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCT...TTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACTTTATTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
3UTR-3UTR TCA 90 bp ATCTTGATGTCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTAGGAAACCTCCCTCTTaGGCATCTTCGGAATTTTTC +
Preference number: 2 (lower is better)
Translates to: ILMSIIETNHFFSWVRGPRKPPS*ASSEFF
Trigger: GAAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCT...AGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGACATCAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
3UTR-3UTR GCA 90 bp ATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGCACATTAACCACTCCTaGAACAAACCCAACTACCAG +
Preference number: 2 (lower is better)
Translates to: INHSCNKPNYQIFSSGRMHINHS*NKPNYQ
Trigger: CTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTG...CATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
3UTR-3UTR GCA 90 bp CTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTTTATTTACCACTGCATaGCCAGGTCCTCCCACAGTG +
Preference number: 2 (lower is better)
Translates to: LVGEEDREYSEDFPMFCFLFTTA*PGPPTV
Trigger: CACTGTGGGAGGACCTGGGCATGCAGTGGTAAATAA...AAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000420970.5
3UTR-3UTR GCA 90 bp ACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTACTTTTATTTACCACTaGATGCCCAGGTCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: TSYSLVKKIENIPKTSQCTFIYH*MPRSSH
Trigger: GTGGGAGGACCTGGGCATGCAGTGGTAAATAAAAGT...ACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420970.5
3UTR-3UTR GCA 90 bp ATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTAACCTTTGACCCAGAGTaGTTTGAGGCTTTGAATTAC +
Preference number: 2 (lower is better)
Translates to: ILLLEASVWCLPPRVELLTFDPE*FEALNY
Trigger: GTAATTCAAAGCCTCAAAGCACTCTGGGTCAAAGGT...TAACAACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443810.5
3UTR-3UTR CCA 90 bp TACCGTCTGATGGACCACACTGAGCAACAGGACTCTAAGGAAGGTTTCCAAATGGTGATTTTTCCCATCTaGTTGCAAACTCAACGTAAT +
Preference number: 2 (lower is better)
Translates to: YRLMDHTEQQDSKEGFQMVIFPI*LQTQRN
Trigger: ATTACGTTGAGTTTGCAACCAGATGGGAAAAATCAC...CATTTGGAAACCTTCCTTAGAGTCCTGTTGCTCAGTGTGGTCCATCAGACGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
3UTR-3UTR CCA 90 bp CAAAATTGGAGCAGCAGAGACTGGAAATCACTGGAAACCACCCTCGATATGGTGAGAAATAGACAAAATTaGAGCAGCAGAGACTGGAAA +
Preference number: 2 (lower is better)
Translates to: QNWSSRDWKSLETTLDMVRNRQN*SSRDWK
Trigger: TTTCCAGTCTCTGCTGCTCCAATTTTGTCTATTTCT...CACCATATCGAGGGTGGTTTCCAGTGATTTCCAGTCTCTGCTGCTCCAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
3UTR CAA 90 bp TCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGCTTTGAGGCTATTAAAAGTGTAGAA +
Preference number: 2 (lower is better)
Translates to: SCNKPNYQIFSSGRM*TFDPECFEAIKSVE
Trigger: TTCTACACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
3UTR-3UTR TCA 90 bp AAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTTCCTTCATCGCGAATaGTCTGATGAAAAGCATCAA +
Preference number: 2 (lower is better)
Translates to: KFCSLKLQSGVYHPEWSCFLHRE*SDEKHQ
Trigger: TTGATGCTTTTCATCAGATCATTCGCGATGAAGGAA...ACAACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR TCA 90 bp AGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAACCCAACTACCAGATTCCTTCATCGCGAATaGTCTGATGAAAAGCATCAA +
Preference number: 2 (lower is better)
Translates to: SGVVSNTLTTPATNPTTRFLHRE*SDEKHQ
Trigger: TTGATGCTTTTCATCAGATCATTCGCGATGAAGGAA...TCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR GCA 90 bp AGCCGAGATTCCTTCATCGCGAATGATCTGATGAAAAGCATCAATGATACCTTTGCAATGAGGGAAATGTaGCATTCCATAAAGCCGAGA +
Preference number: 2 (lower is better)
Translates to: SRDSFIANDLMKSINDTFAMREM*HSIKPR
Trigger: TCTCGGCTTTATGGAATGGCACATTTCCCTCATTGC...AAAGGTATCATTGATGCTTTTCATCAGATCATTCGCGATGAAGGAATCTCGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR GCA 90 bp TACACCAAGTTTATAAAGGGAGATAATATCCAGACCTCAACAAGATATCTGCTCTGGCCATACTCCCTGTaGACCCTTGGATGCTTTTCA +
Preference number: 2 (lower is better)
Translates to: YTKFIKGDNIQTSTRYLLWPYSL*TLGCFS
Trigger: TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCA...GAGCAGATATCTTGTTGAGGTCTGGATATTATCTCCCTTTATAAACTTGGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
3UTR-3UTR GCA 90 bp CACATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAACCTTTGACCCAGAGTaGTTTGAGGCTATTAAAAGT +
Preference number: 2 (lower is better)
Translates to: HINHSCNKPNYQIFSSGRTFDPE*FEAIKS
Trigger: ACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGT...TCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
3UTR-3UTR CCA 90 bp CAGAGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAACCCAACTACCAGAAATAGACAAAATTaGAGCAGCAGAGACTGGAAA +
Preference number: 2 (lower is better)
Translates to: QSGVVSNTLTTPATNPTTRNRQN*SSRDWK
Trigger: TTTCCAGTCTCTGCTGCTCCAATTTTGTCTATTTCT...GGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
3UTR-3UTR CCA 90 bp GTGTTTACCACCCAGAGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAGAAATAGACAAAATTaGAGCAGCAGAGACTGGAAA +
Preference number: 2 (lower is better)
Translates to: VFTTQSGVVSNTLTTPATRNRQN*SSRDWK
Trigger: TTTCCAGTCTCTGCTGCTCCAATTTTGTCTATTTCT...TGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACTCTGGGTGGTAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
3UTR-3UTR TCA 90 bp ATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTTCCTTCATCGCGAATaGTCTGATGAAAAGCATCAA +
Preference number: 2 (lower is better)
Translates to: INHSCNKPNYQIFSSGRMFLHRE*SDEKHQ
Trigger: TTGATGCTTTTCATCAGATCATTCGCGATGAAGGAA...CATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR TCA 90 bp AAAACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATCTGGGTTTAGTCTATaGCGCCCAAACCTCAGAATT +
Preference number: 2 (lower is better)
Translates to: KTSYSLVKKIENIPKTSQSGFSL*RPNLRI
Trigger: AATTCTGAGGTTTGGGCGTCATAGACTAAACCCAGA...TTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
3UTR-3UTR TCA 90 bp GTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTCTGTCTGGGTTTAGTCTATaGCGCCCAAACCTCAGAATT +
Preference number: 2 (lower is better)
Translates to: VGEEDREYSEDFPMFCFLSGFSL*RPNLRI
Trigger: AATTCTGAGGTTTGGGCGTCATAGACTAAACCCAGA...CAGAAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000430221.5
ENST00000447566.5
3UTR-3UTR TCA 90 bp TACACCAAGTTTATAAAGGGAGATAATATCCAGACCTCAACAAGATATCTGCTCCCATTTATTGGGACTTaGCTGACCAGGGCTTGTAAG +
Preference number: 2 (lower is better)
Translates to: YTKFIKGDNIQTSTRYLLPFIGT*LTRACK
Trigger: CTTACAAGCCCTGGTCAGTCAAGTCCCAATAAATGG...GAGCAGATATCTTGTTGAGGTCTGGATATTATCTCCCTTTATAAACTTGGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
3UTR-3UTR GCA 90 bp ACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTAATCGCTTTGGCTACTaGACCAATGATGAACACATC +
Preference number: 2 (lower is better)
Translates to: TSYSLVKKIENIPKTSQCNRFGY*TNDEHI
Trigger: GATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATT...ACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
3UTR-3UTR TCA 90 bp ATCTTGATGTCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTGGAAAACACCAACACTaGGACATACAAAAGTATTTG +
Preference number: 2 (lower is better)
Translates to: ILMSIIETNHFFSWVRGPGKHQH*DIQKYL
Trigger: CAAATACTTTTGTATGTCTCAGTGTTGGTGTTTTCC...AGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGACATCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
3UTR-3UTR CCA 90 bp CAACACATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTACCTTTGTAGTTTGTTaGTACAATGTCTTCATTCCT +
Preference number: 2 (lower is better)
Translates to: QHINHSCNKPNYQIFSSGTFVVC*YNVFIP
Trigger: AGGAATGAAGACATTGTACCAACAAACTACAAAGGT...ACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR CCA 90 bp AACTACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGTGCTTTAGAAATAGACAAAATTaGAGCAGCAGAGACTGGAAA +
Preference number: 2 (lower is better)
Translates to: NYQIFSSGRMLTFDPECFRNRQN*SSRDWK
Trigger: TTTCCAGTCTCTGCTGCTCCAATTTTGTCTATTTCT...AAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
3UTR-3UTR CCA 90 bp ATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGAGAAATAGACAAAATTaGAGCAGCAGAGACTGGAAA +
Preference number: 2 (lower is better)
Translates to: INHSCNKPNYQIFSSGRMRNRQN*SSRDWK
Trigger: TTTCCAGTCTCTGCTGCTCCAATTTTGTCTATTTCT...CATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
3UTR-3UTR TCA 90 bp CTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTTTCCTTCATCGCGAATaGTCTGATGAAAAGCATCAA +
Preference number: 2 (lower is better)
Translates to: LVGEEDREYSEDFPMFCFFLHRE*SDEKHQ
Trigger: TTGATGCTTTTCATCAGATCATTCGCGATGAAGGAA...AAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000430221.5
ENST00000447566.5
3UTR-3UTR CCA 90 bp ATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGACCTTTGTAGTTTGTTaGTACAATGTCTTCATTCCT +
Preference number: 2 (lower is better)
Translates to: INHSCNKPNYQIFSSGRMTFVVC*YNVFIP
Trigger: AGGAATGAAGACATTGTACCAACAAACTACAAAGGT...CATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR CCA 90 bp ACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTACCTTTGTAGTTTGTTaGTACAATGTCTTCATTCCT +
Preference number: 2 (lower is better)
Translates to: TSYSLVKKIENIPKTSQCTFVVC*YNVFIP
Trigger: AGGAATGAAGACATTGTACCAACAAACTACAAAGGT...ACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
3UTR-3UTR TCA 90 bp AGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCTGCCGTTTTAAACCTTCATAAATTCCTTCATCGCGAATaGTCTGATGAAAAGCATCAA +
Preference number: 2 (lower is better)
Translates to: RKKASSVSLKAAVLNLHKFLHRE*SDEKHQ
Trigger: TTGATGCTTTTCATCAGATCATTCGCGATGAAGGAA...TTTATGAAGGTTTAAAACGGCAGCTTTTAAAGAAACGGATGAAGCTTTCTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
3UTR-3UTR CCA 90 bp GAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTCTGGGTTTAGTCACCTTTGTAGTTTGTTaGTACAATGTCTTCATTCCT +
Preference number: 2 (lower is better)
Translates to: EDREYSEDFPMFCFLGLVTFVVC*YNVFIP
Trigger: AGGAATGAAGACATTGTACCAACAAACTACAAAGGT...GACTAAACCCAGAAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000430221.5
ENST00000447566.5
3UTR TCA 72 bp CCCAGCAAGCTCTCAGCTTGTGGCAGTACTACCGTCTaGTGGACCACACTGAGCAACAGGACTCTAAGGAAG +
Preference number: 3 (lower is better)
Translates to: PSKLSACGSTTV*WTTLSNRTLRK
Trigger: CTTCCTTAGAGTCCTGTTGCTCAGTGTGGTCCATCAGACGGTAGTACTGCCACAAGCTGAGAGCTTGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
3UTR-3UTR CAA 90 bp CACCGTGGTGGCAATCGCTTTGGCTACTGCACCAATGATGAACACATCCAAGGAGCCCAAACCTCAGAATaGACTGTACCGTCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: HRGGNRFGYCTNDEHIQGAQTSE*TVPSAG
Trigger: CCCTGCAGACGGTACAGTCAATTCTGAGGTTTGGGC...TCCTTGGATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000430221.5
ENST00000447566.5
3UTR GCA 72 bp GGGATAGGTCACCGTGGTGGCAATCGCTTTGGCTACTaGACCAATGATGAACACATCCAAGGAAGAAAGCTT +
Preference number: 3 (lower is better)
Translates to: GIGHRGGNRFGY*TNDEHIQGRKL
Trigger: AAGCTTTCTTCCTTGGATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTGACCTATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
3UTR CCA 72 bp GGGAATGTTAAAATACGGAACAGGATTCAGAAACTCTaGGTTGCGTGCCCAGCAAGCTCTCAGCTTGTGGCA +
Preference number: 3 (lower is better)
Translates to: GNVKIRNRIQKL*VACPASSQLVA
Trigger: TGCCACAAGCTGAGAGCTTGCTGGGCACGCAACCCAGAGTTTCTGAATCCTGTTCCGTATTTTAACATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
3UTR-3UTR CAA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCGAGGAAACCTCCCTCTaGAGCATCTTCGGAATTTTT +
Preference number: 3 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPEETSL*SIFGIF
Trigger: AAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCTC...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
3UTR CCA 72 bp ATAGACAAAATTGGAGCAGCAGAGACTGGAAATCACTaGAAACCACCCTCGATATGGTGCCAGGAGTCCTTC +
Preference number: 3 (lower is better)
Translates to: IDKIGAAETGNH*KPPSIWCQESF
Trigger: GAAGGACTCCTGGCACCATATCGAGGGTGGTTTCCAGTGATTTCCAGTCTCTGCTGCTCCAATTTTGTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
3UTR-3UTR CAA 90 bp CAGGGGTCCTATGGTCTCCTGAACTTTAATGTGGCTGTGAATCACCTGGGAATGGAGGAAACCTCCCTCTaGAGCATCTTCGGAATTTTT +
Preference number: 3 (lower is better)
Translates to: QGSYGLLNFNVAVNHLGMEETSL*SIFGIF
Trigger: AAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCTC...CATTCCCAGGTGATTCACAGCCACATTAAAGTTCAGGAGACCATAGGACCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
3UTR-3UTR CAA 90 bp AACAGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCATCGCGAAACTGGATGGCAGGATaGAAGACCAACAGCAATGAG +
Preference number: 3 (lower is better)
Translates to: NSNEGNVPFHKAEIPSSRNWMAG*KTNSNE
Trigger: CTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGTT...TCGCGATGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR CAA 90 bp AGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAACCCAACTACCAGATCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGC +
Preference number: 3 (lower is better)
Translates to: SGVVSNTLTTPATNPTTRSSGRM*TFDPEC
Trigger: GCACTCTGGGTCAAAGGTCAACATTCTACCACTGGA...TCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
3UTR-3UTR CAA 90 bp CAACACATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTTCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGC +
Preference number: 3 (lower is better)
Translates to: QHINHSCNKPNYQIFSSGSSGRM*TFDPEC
Trigger: GCACTCTGGGTCAAAGGTCAACATTCTACCACTGGA...ACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
3UTR TCA 72 bp AATCACTTCTCTTCACTCAGGAGGAAACCTCCCTCTTaGGCATCTTCGGAATTTTTCATGGGAAGGCGTCTC +
Preference number: 3 (lower is better)
Translates to: NHFSSLRRKPPS*ASSEFFMGRRL
Trigger: GAGACGCCTTCCCATGAAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCTCCTGAGTGAAGAGAAGTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
3UTR-3UTR CAA 90 bp CTCTTGAGCATCTTCGGAATTTTTCATGGGAAGGCGTCTCAGTGTTGGTGTGCACCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 3 (lower is better)
Translates to: LLSIFGIFHGKASQCWCAPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...TGCACACCAACACTGAGACGCCTTCCCATGAAAAATTCCGAAGATGCTCAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
3UTR-3UTR CAA 90 bp TTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTAGCACCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 3 (lower is better)
Translates to: LLLEASVWCLPPRVELLAPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...TGCTAACAACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR CAA 90 bp CCAACAGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCATCGCCCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 3 (lower is better)
Translates to: PTAMREMCHSIKPRFLHRPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...GCGATGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR CAA 90 bp AACACATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTATCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGC +
Preference number: 3 (lower is better)
Translates to: NTLTTPATNPTTRSFPVVSSGRM*TFDPEC
Trigger: GCACTCTGGGTCAAAGGTCAACATTCTACCACTGGA...TACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
3UTR-3UTR CAA 90 bp CATCCAAGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCTGCCGTTTTAAACCTTGTGGTGGCAATCGCTTaGGCTACTGCACCAATGATG +
Preference number: 3 (lower is better)
Translates to: HPRKKASSVSLKAAVLNLVVAIA*ATAPMM
Trigger: CATCATTGGTGCAGTAGCCAAAGCGATTGCCACCAC...AAGGTTTAAAACGGCAGCTTTTAAAGAAACGGATGAAGCTTTCTTCCTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
3UTR-3UTR CAA 90 bp ATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTACCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 3 (lower is better)
Translates to: ILLLEASVWCLPPRVELLPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...TAACAACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR CAA 90 bp CAACACATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTCCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 3 (lower is better)
Translates to: QHINHSCNKPNYQIFSSGPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...ACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR CAA 90 bp ACCACCCAGAGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAACCCATACCTTTGTAGTTTGTaGGTACAATGTCTTCATTCC +
Preference number: 3 (lower is better)
Translates to: TTQSGVVSNTLTTPATNPYLCSL*VQCLHS
Trigger: GGAATGAAGACATTGTACCAACAAACTACAAAGGTA...TGGGTTTGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACTCTGGGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR CAA 90 bp CCAACAGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCATCGCTACCTTTGTAGTTTGTaGGTACAATGTCTTCATTCC +
Preference number: 3 (lower is better)
Translates to: PTAMREMCHSIKPRFLHRYLCSL*VQCLHS
Trigger: GGAATGAAGACATTGTACCAACAAACTACAAAGGTA...GCGATGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR-3UTR CAA 90 bp ACAAAAATAAAGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAGAGGAAACCTCCCTCTaGAGCATCTTCGGAATTTTT +
Preference number: 3 (lower is better)
Translates to: TKIKSCPWHSPNVSFREEEETSL*SIFGIF
Trigger: AAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCTC...TTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACTTTATTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
3UTR-3UTR CAA 90 bp CTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTTCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGC +
Preference number: 3 (lower is better)
Translates to: LVGEEDREYSEDFPMFCFSSGRM*TFDPEC
Trigger: GCACTCTGGGTCAAAGGTCAACATTCTACCACTGGA...AAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430221.5
ENST00000447566.5
3UTR TCA 72 bp AGACTTCCCAATGTTCTGTTTTCTGGGTTTAGTCTATaGCGCCCAAACTGTTCATTCTCTCTTCCACTAGCT +
Preference number: 3 (lower is better)
Translates to: RLPNVLFSGFSL*RPNCSFSLPLA
Trigger: AGCTAGTGGAAGAGAGAATGAACAGTTTGGGCGTCATAGACTAAACCCAGAAAACAGAACATTGGGAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420970.5
3UTR-3UTR CAA 90 bp AGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCTGCCGTTTTAAACCTTCATAAAGTGGTGGCAATCGCTTaGGCTACTGCACCAATGATG +
Preference number: 3 (lower is better)
Translates to: RKKASSVSLKAAVLNLHKVVAIA*ATAPMM
Trigger: CATCATTGGTGCAGTAGCCAAAGCGATTGCCACCAC...TTTATGAAGGTTTAAAACGGCAGCTTTTAAAGAAACGGATGAAGCTTTCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
3UTR-3UTR CAA 90 bp TACACCAAGTTTATAAAGGGAGATAATATCCAGACCTCAACAAGATATCTGCTCACTCCCTGTGCACCCTaGGATGCTTTTCAAGCCAAT +
Preference number: 3 (lower is better)
Translates to: YTKFIKGDNIQTSTRYLLTPCAP*DAFQAN
Trigger: ATTGGCTTGAAAAGCATCCAAGGGTGCACAGGGAGT...GAGCAGATATCTTGTTGAGGTCTGGATATTATCTCCCTTTATAAACTTGGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
3UTR TCA 72 bp AACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCTTTGAGGCTATTAAAA +
Preference number: 3 (lower is better)
Translates to: NPTTRSFPVVEC*PLTQSALRLLK
Trigger: TTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
3UTR-3UTR CAA 90 bp CCAGGGCTTGTAAGAATGGACACAAAACTTCAAGTCTTTCGTAATGAAAGGATTAAAACGTCTTACTCGTaGGTGAAGAAGATAGAGAAT +
Preference number: 3 (lower is better)
Translates to: PGLVRMDTKLQVFRNERIKTSYS*VKKIEN
Trigger: ATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTT...AATCCTTTCATTACGAAAGACTTGAAGTTTTGTGTCCATTCTTACAAGCCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263255.10
3UTR TCA 72 bp TTTGACCCAGAGTGCTTTGAGGCTTTGAATTACTATTaGAAGCTAATCTTACTCATCTCTTCATGCAAGTTC +
Preference number: 3 (lower is better)
Translates to: FDPECFEALNYY*KLILLISSCKF
Trigger: GAACTTGCATGAAGAGATGAGTAAGATTAGCTTTCAATAGTAATTCAAAGCCTCAAAGCACTCTGGGTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443810.5
CDS-3UTR TCA 90 bp CCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTGAGACACCGGAGCTCAGGGTGTaGGAGTCGCAATCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: PWHSPNVSFREENTNTETPELRV*ESQSPP
Trigger: GGGCGGGGATTGCGACTCTCACACCCTGAGCTCCGG...TGTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544408.5
CDS-3UTR GCA 90 bp GAGCCAGAGTCAAGGGAGAATCACTTCTCTTCACTCAGGAGGAAACCTCCCTCTTCAAACCCGCCCGCCTaGCCTAGAACCACTTCCGGG +
Preference number: 4 (lower is better)
Translates to: EPESRENHFSSLRRKPPSSNPPA*PRTTSG
Trigger: CCCGGAAGTGGTTCTAGGGCAGGCGGGCGGGTTTGA...AGAGGGAGGTTTCCTCCTGAGTGAAGAGAAGTGATTCTCCCTTGACTCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544408.5
CDS-3UTR CCA 90 bp CAGGGGATAGGTCACCGTGGTGGCAATCGCTTTGGCTACTGCACCAATGATGAACAGCACGGAAGCCATTaGTGCGGCTCCTCGAAGACC +
Preference number: 4 (lower is better)
Translates to: QGIGHRGGNRFGYCTNDEQHGSH*CGSSKT
Trigger: GGTCTTCGAGGAGCCGCACCAATGGCTTCCGTGCTG...TTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTGACCTATCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR TCA 90 bp AGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCATCGCGAATGCCGGAGCTCAGGGTGTaGGAGTCGCAATCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: SNEGNVPFHKAEIPSSRMPELRV*ESQSPP
Trigger: GGGCGGGGATTGCGACTCTCACACCCTGAGCTCCGG...CATTCGCGATGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427084.5
ENST00000443810.5
ENST00000458600.5
CDS-3UTR TCA 90 bp ATTCCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGCCGGAGCTCAGGGTGTaGGAGTCGCAATCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: IPKFCSLKLQSGVYHPEWPELRV*ESQSPP
Trigger: GGGCGGGGATTGCGACTCTCACACCCTGAGCTCCGG...CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000443810.5
ENST00000458600.5
CDS-3UTR TCA 90 bp CAACACATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTCCGGAGCTCAGGGTGTaGGAGTCGCAATCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: QHINHSCNKPNYQIFSSGPELRV*ESQSPP
Trigger: GGGCGGGGATTGCGACTCTCACACCCTGAGCTCCGG...ACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000443810.5
ENST00000458600.5
CDS-3UTR TCA 90 bp AGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAACCCAACTACCAGACCGGAGCTCAGGGTGTaGGAGTCGCAATCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: SGVVSNTLTTPATNPTTRPELRV*ESQSPP
Trigger: GGGCGGGGATTGCGACTCTCACACCCTGAGCTCCGG...TCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000443810.5
ENST00000458600.5
CDS-3UTR CCA 90 bp GGTGACAACAGGTCCAGTTGGCCATACTCCCTGTGCACCCTTGGATGCTTTTCAGGGGATAGGTCACCGTaGTGGCAATCGCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: GDNRSSWPYSLCTLGCFSGDRSP*WQSLWL
Trigger: TAGCCAAAGCGATTGCCACCACGGTGACCTATCCCC...TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR CCA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCAAGGCGTCTCAGTGTTaGTGTGCACGCTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPKASQC*CARFSP
Trigger: GGGGCTGAAGCGTGCACACCAACACTGAGACGCCTT...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR TCA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCCCCAAACCTCAGAATTaGCTGTACCGTCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPPKPQN*LYRLQG
Trigger: CCCCTGCAGACGGTACAGTCAATTCTGAGGTTTGGG...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR GCA 90 bp TTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTAGCACACGGAAGCCATTGGTaGGGCTCCTCGAAGACCCAG +
Preference number: 4 (lower is better)
Translates to: LLLEASVWCLPPRVELLAHGSHW*GSSKTQ
Trigger: CTGGGTCTTCGAGGAGCCGCACCAATGGCTTCCGTG...TGCTAACAACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CCA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCGGGGATAGGTCACCGTaGTGGCAATCGCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPGDRSP*WQSLWL
Trigger: TAGCCAAAGCGATTGCCACCACGGTGACCTATCCCC...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR TCA 90 bp CAGGGGATAGGTCACCGTGGTGGCAATCGCTTTGGCTACTGCACCAATGATGAAACTGGATGGCAGGATTaGAGACCAACAGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: QGIGHRGGNRFGYCTNDETGWQD*RPTAMR
Trigger: CCTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGT...TTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTGACCTATCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR GCA 90 bp CCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTCACGGAAGCCATTGGTaGGGCTCCTCGAAGACCCAG +
Preference number: 4 (lower is better)
Translates to: PKFCSLKLQSGVYHPEWSHGSHW*GSSKTQ
Trigger: CTGGGTCTTCGAGGAGCCGCACCAATGGCTTCCGTG...ACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR GCA 90 bp GAGCCAGAGTCAAGGGAGAATCACTTCTCTTCACTCAGGAGGAAACCTCCCTCTGTCTCAGTGTTGGTGTaGACGCTTCAGCCCCATAAC +
Preference number: 4 (lower is better)
Translates to: EPESRENHFSSLRRKPPSVSVLV*TLQPHN
Trigger: GTTATGGGGCTGAAGCGTGCACACCAACACTGAGAC...AGAGGGAGGTTTCCTCCTGAGTGAAGAGAAGTGATTCTCCCTTGACTCTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR GCA 90 bp GGTGACAACAGGTCCAGTTGGCCATACTCCCTGTGCACCCTTGGATGCTTTTCATGGCCATACTCCCTGTaGACCCTTGGATGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: GDNRSSWPYSLCTLGCFSWPYSL*TLGCFS
Trigger: TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCA...TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR GCA 90 bp CAGGGGATAGGTCACCGTGGTGGCAATCGCTTTGGCTACTGCACCAATGATGAATGGCCATACTCCCTGTaGACCCTTGGATGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: QGIGHRGGNRFGYCTNDEWPYSL*TLGCFS
Trigger: TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCA...TTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTGACCTATCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR GCA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCTCAGAAACTCTGGGTTaGGTGCCCAGCAAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPSETLG*VPSKLS
Trigger: TGAGAGCTTGCTGGGCACGCAACCCAGAGTTTCTGA...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR GCA 90 bp TGCCAGGAGTCCTTCTTCTTTAATGATCTCCAGGAGCACCATGTGTGTAGTTTTTCAAACCCGCCCGCCTaGCCTAGAACCACTTCCGGG +
Preference number: 4 (lower is better)
Translates to: CQESFFFNDLQEHHVCSFSNPPA*PRTTSG
Trigger: CCCGGAAGTGGTTCTAGGGCAGGCGGGCGGGTTTGA...AAAACTACACACATGGTGCTCCTGGAGATCATTAAAGAAGAAGGACTCCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458600.5
CDS-3UTR CCA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCGATAGGTCACCGTGGTaGCAATCGCTTTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPDRSPW*QSLWLL
Trigger: CAGTAGCCAAAGCGATTGCCACCACGGTGACCTATC...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR CCA 90 bp GGAGGAAACCTCCCTCTTGAGCATCTTCGGAATTTTTCATGGGAAGGCGTCTCAGACAACAGGTCCAGTTaGCCATACTCCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: GGNLPLEHLRNFSWEGVSDNRSS*PYSLCT
Trigger: GGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTC...TGAGACGCCTTCCCATGAAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR CCA 90 bp GGTGACAACAGGTCCAGTTGGCCATACTCCCTGTGCACCCTTGGATGCTTTTCAGTGCTGACCATTTATTaGGACTTGACTGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: GDNRSSWPYSLCTLGCFSVLTIY*DLTDQG
Trigger: GCCCTGGTCAGTCAAGTCCCAATAAATGGTCAGCAC...TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp GAGCCAGAGTCAAGGGAGAATCACTTCTCTTCACTCAGGAGGAAACCTCCCTCTACTGGATGGCAGGATTaGAGACCAACAGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: EPESRENHFSSLRRKPPSTGWQD*RPTAMR
Trigger: CCTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGT...AGAGGGAGGTTTCCTCCTGAGTGAAGAGAAGTGATTCTCCCTTGACTCTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR TCA 90 bp CCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTGAGACACCCAAACCTCAGAATTaGCTGTACCGTCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PWHSPNVSFREENTNTETPKPQN*LYRLQG
Trigger: CCCCTGCAGACGGTACAGTCAATTCTGAGGTTTGGG...TGTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR GCA 90 bp AGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAACCCAACTACCAGACACGGAAGCCATTGGTaGGGCTCCTCGAAGACCCAG +
Preference number: 4 (lower is better)
Translates to: SGVVSNTLTTPATNPTTRHGSHW*GSSKTQ
Trigger: CTGGGTCTTCGAGGAGCCGCACCAATGGCTTCCGTG...TCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR GCA 90 bp CCTCTTGAGCATCTTCGGAATTTTTCATGGGAAGGCGTCTCAGTGTTGGTGTGCGTCTCAGTGTTGGTGTaGACGCTTCAGCCCCATAAC +
Preference number: 4 (lower is better)
Translates to: PLEHLRNFSWEGVSVLVCVSVLV*TLQPHN
Trigger: GTTATGGGGCTGAAGCGTGCACACCAACACTGAGAC...GCACACCAACACTGAGACGCCTTCCCATGAAAAATTCCGAAGATGCTCAAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR GCA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCTGGCCATACTCCCTGTaGACCCTTGGATGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPWPYSL*TLGCFS
Trigger: TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCA...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR CCA 90 bp AAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTCAGCACGGAAGCCATTaGTGCGGCTCCTCGAAGACC +
Preference number: 4 (lower is better)
Translates to: KFCSLKLQSGVYHPEWSCQHGSH*CGSSKT
Trigger: GGTCTTCGAGGAGCCGCACCAATGGCTTCCGTGCTG...ACAACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CCA 90 bp TTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTAGCAACACATTAACCACTCAGCACGGAAGCCATTaGTGCGGCTCCTCGAAGACC +
Preference number: 4 (lower is better)
Translates to: FSLVFTTQSGVVSNTLTTQHGSH*CGSSKT
Trigger: GGTCTTCGAGGAGCCGCACCAATGGCTTCCGTGCTG...AGTGGTTAATGTGTTGCTAACAACTCCACTCTGGGTGGTAAACACCAGACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CCA 90 bp ATTCCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGCAGCACGGAAGCCATTaGTGCGGCTCCTCGAAGACC +
Preference number: 4 (lower is better)
Translates to: IPKFCSLKLQSGVYHPEWQHGSH*CGSSKT
Trigger: GGTCTTCGAGGAGCCGCACCAATGGCTTCCGTGCTG...CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CCA 90 bp CAGGGGTCCTATGGTCTCCTGAACTTTAATGTGGCTGTGAATCACCTGGGAATGGATAGGTCACCGTGGTaGCAATCGCTTTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: QGSYGLLNFNVAVNHLGMDRSPW*QSLWLL
Trigger: CAGTAGCCAAAGCGATTGCCACCACGGTGACCTATC...CATTCCCAGGTGATTCACAGCCACATTAAAGTTCAGGAGACCATAGGACCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp AGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACAGGGGATAGGTCACCGTaGTGGCAATCGCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: SHARGTALMLVLGRKTPTGDRSP*WQSLWL
Trigger: TAGCCAAAGCGATTGCCACCACGGTGACCTATCCCC...TGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp CCAACAGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCATCGCGGGGATAGGTCACCGTaGTGGCAATCGCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: PTAMREMCHSIKPRFLHRGDRSP*WQSLWL
Trigger: TAGCCAAAGCGATTGCCACCACGGTGACCTATCCCC...GCGATGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CCA 90 bp CCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTGAGACAGACAACAGGTCCAGTTaGCCATACTCCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: PWHSPNVSFREENTNTETDNRSS*PYSLCT
Trigger: GGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTC...TGTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp GAGCCAGAGTCAAGGGAGAATCACTTCTCTTCACTCAGGAGGAAACCTCCCTCTGTGCTGACCATTTATTaGGACTTGACTGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: EPESRENHFSSLRRKPPSVLTIY*DLTDQG
Trigger: GCCCTGGTCAGTCAAGTCCCAATAAATGGTCAGCAC...AGAGGGAGGTTTCCTCCTGAGTGAAGAGAAGTGATTCTCCCTTGACTCTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp GAGCCAGAGTCAAGGGAGAATCACTTCTCTTCACTCAGGAGGAAACCTCCCTCTGAAGACCAACAGCAATaGGGGAAATGTGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: EPESRENHFSSLRRKPPSEDQQQ*GKCAIP
Trigger: TGGAATGGCACATTTCCCTCATTGCTGTTGGTCTTC...AGAGGGAGGTTTCCTCCTGAGTGAAGAGAAGTGATTCTCCCTTGACTCTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR TCA 90 bp GAGCCAGAGTCAAGGGAGAATCACTTCTCTTCACTCAGGAGGAAACCTCCCTCTCCATTTATTGGGACTTaGCTGACCAGGGCTTGTAAG +
Preference number: 4 (lower is better)
Translates to: EPESRENHFSSLRRKPPSPFIGT*LTRACK
Trigger: CTTACAAGCCCTGGTCAGTCAAGTCCCAATAAATGG...AGAGGGAGGTTTCCTCCTGAGTGAAGAGAAGTGATTCTCCCTTGACTCTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp ATTCCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGTTGAGGCCAGGGGTTTaGAACCAGCCTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: IPKFCSLKLQSGVYHPEWLRPGV*NQPGQH
Trigger: GTGTTGCCCAGGCTGGTTTCAAACCCCTGGCCTCAA...CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426396.5
CDS-3UTR GCA 90 bp CCTCTTGAGCATCTTCGGAATTTTTCATGGGAAGGCGTCTCAGTGTTGGTGTGCTGGCCATACTCCCTGTaGACCCTTGGATGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: PLEHLRNFSWEGVSVLVCWPYSL*TLGCFS
Trigger: TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCA...GCACACCAACACTGAGACGCCTTCCCATGAAAAATTCCGAAGATGCTCAAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR CCA 90 bp CCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTGAGACAGATAGGTCACCGTGGTaGCAATCGCTTTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: PWHSPNVSFREENTNTETDRSPW*QSLWLL
Trigger: CAGTAGCCAAAGCGATTGCCACCACGGTGACCTATC...TGTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp ATGACGCCCAAACTGTTCATTCTCTCTTCCACTAGCTCCATAAGGGCAGGGATTGATAGGTCACCGTGGTaGCAATCGCTTTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: MTPKLFILSSTSSIRAGIDRSPW*QSLWLL
Trigger: CAGTAGCCAAAGCGATTGCCACCACGGTGACCTATC...AATCCCTGCCCTTATGGAGCTAGTGGAAGAGAGAATGAACAGTTTGGGCGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420970.5
CDS-3UTR CCA 90 bp CAGAGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAACCCAACTACCGGGGATAGGTCACCGTaGTGGCAATCGCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: QSGVVSNTLTTPATNPTTGDRSP*WQSLWL
Trigger: TAGCCAAAGCGATTGCCACCACGGTGACCTATCCCC...GGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CCA 90 bp TCTATGACGCCCAAACTGTTCATTCTCTCTTCCACTAGCTCCATAAGGGCAGGGTGGAGCAGCAGAGACTaGAAATCACTGGAAACCACC +
Preference number: 4 (lower is better)
Translates to: SMTPKLFILSSTSSIRAGWSSRD*KSLETT
Trigger: GGTGGTTTCCAGTGATTTCCAGTCTCTGCTGCTCCA...CCCTGCCCTTATGGAGCTAGTGGAAGAGAGAATGAACAGTTTGGGCGTCATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420970.5
CDS-3UTR TCA 90 bp CCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTGAGACAACTGGATGGCAGGATTaGAGACCAACAGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: PWHSPNVSFREENTNTETTGWQD*RPTAMR
Trigger: CCTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGT...TGTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp GAGCCAGAGTCAAGGGAGAATCACTTCTCTTCACTCAGGAGGAAACCTCCCTCTAGGAAACCTCCCTCTTaGGCATCTTCGGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: EPESRENHFSSLRRKPPSRKPPS*ASSEFF
Trigger: GAAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCT...AGAGGGAGGTTTCCTCCTGAGTGAAGAGAAGTGATTCTCCCTTGACTCTGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR TCA 90 bp GAGCCAGAGTCAAGGGAGAATCACTTCTCTTCACTCAGGAGGAAACCTCCCTCTTTATTGGGACTTGACTaGCCAGGGCTTGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: EPESRENHFSSLRRKPPSLLGLD*PGLVRM
Trigger: CATTCTTACAAGCCCTGGTCAGTCAAGTCCCAATAA...AGAGGGAGGTTTCCTCCTGAGTGAAGAGAAGTGATTCTCCCTTGACTCTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCGTAGCTCACACGGTTTaGAGTGAGTATGGATATGGT +
Preference number: 4 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPVAHTV*SEYGYG
Trigger: ACCATATCCATACTCACTTCAAACCGTGTGAGCTAC...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402844.7
CDS-3UTR TCA 90 bp GGTGACAACAGGTCCAGTTGGCCATACTCCCTGTGCACCCTTGGATGCTTTTCATTATATCTCTGTCACTaGCCTCTTAGGAGACCTAAG +
Preference number: 4 (lower is better)
Translates to: GDNRSSWPYSLCTLGCFSLYLCH*PLRRPK
Trigger: CTTAGGTCTCCTAAGAGGTCAGTGACAGAGATATAA...TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402844.7
CDS-3UTR TCA 90 bp TCCATAAGGGCAGGGATTATGACTTTTATTTACCACTGCATGCCCAGGTCCTCCCCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: SIRAGIMTFIYHCMPRSSPVVEC*PLTQSA
Trigger: AGCACTCTGGGTCAAAGGTCAACATTCTACCACTGG...GGAGGACCTGGGCATGCAGTGGTAAATAAAAGTCATAATCCCTGCCCTTATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420970.5
CDS-3UTR TCA 90 bp TTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTAGCAACACATTAACCACTATATGGTGCCAGGCCTaGAGTCGAAGTCTAGCACGG +
Preference number: 4 (lower is better)
Translates to: FSLVFTTQSGVVSNTLTTIWCQA*SRSLAR
Trigger: CCGTGCTAGACTTCGACTTCAGGCCTGGCACCATAT...AGTGGTTAATGTGTTGCTAACAACTCCACTCTGGGTGGTAAACACCAGACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430221.5
CDS-3UTR GCA 90 bp CACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTTGACCGTCTCAGTGTTGGTGTaGACGCTTCAGCCCCATAAC +
Preference number: 4 (lower is better)
Translates to: HSCNKPNYQIFSSGRMLTVSVLV*TLQPHN
Trigger: GTTATGGGGCTGAAGCGTGCACACCAACACTGAGAC...GGTCAACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447566.5
CDS-3UTR CCA 90 bp ACCAACAGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCATCGGATAGGTCACCGTGGTaGCAATCGCTTTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: TNSNEGNVPFHKAEIPSSDRSPW*QSLWLL
Trigger: CAGTAGCCAAAGCGATTGCCACCACGGTGACCTATC...CGATGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCTGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CCA 90 bp CAGGGGTCCTATGGTCTCCTGAACTTTAATGTGGCTGTGAATCACCTGGGAATGATTTGTCCTAGAACCTaGGGGAGAGTTCAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: QGSYGLLNFNVAVNHLGMICPRT*GRVQGK
Trigger: CTTTCCCTGAACTCTCCCCCAGGTTCTAGGACAAAT...CATTCCCAGGTGATTCACAGCCACATTAAAGTTCAGGAGACCATAGGACCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp TACCGTCTGATGGACCACACTGAGCAACAGGACTCTAAGGAAGGTTTCCAAATGGTGCTGACCATTTATTaGGACTTGACTGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: YRLMDHTEQQDSKEGFQMVLTIY*DLTDQG
Trigger: GCCCTGGTCAGTCAAGTCCCAATAAATGGTCAGCAC...CATTTGGAAACCTTCCTTAGAGTCCTGTTGCTCAGTGTGGTCCATCAGACGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp AGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACAGTGCTGACCATTTATTaGGACTTGACTGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: SHARGTALMLVLGRKTPTVLTIY*DLTDQG
Trigger: GCCCTGGTCAGTCAAGTCCCAATAAATGGTCAGCAC...TGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp CCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTGAGACAAAACCACCCTCGATATaGTGCCAGGAGTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PWHSPNVSFREENTNTETKPPSI*CQESFF
Trigger: GAAGAAGGACTCCTGGCACCATATCGAGGGTGGTTT...TGTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435456.7
CDS-3UTR CCA 90 bp CCAACAGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCATCGCTGGAGCAGCAGAGACTaGAAATCACTGGAAACCACC +
Preference number: 4 (lower is better)
Translates to: PTAMREMCHSIKPRFLHRWSSRD*KSLETT
Trigger: GGTGGTTTCCAGTGATTTCCAGTCTCTGCTGCTCCA...GCGATGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR TCA 90 bp CACCGTGGTGGCAATCGCTTTGGCTACTGCACCAATGATGAACACATCCAAGGACTTTTCTCATCAACCTaGAGTCGAAGTCTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: HRGGNRFGYCTNDEHIQGLFSST*SRSLAV
Trigger: TACAGCTAGACTTCGACTTCAGGTTGATGAGAAAAG...TCCTTGGATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263255.10
CDS-3UTR TCA 90 bp ACCACCCAGAGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAACCCAGAAGACCAACAGCAATaGGGGAAATGTGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: TTQSGVVSNTLTTPATNPEDQQQ*GKCAIP
Trigger: TGGAATGGCACATTTCCCTCATTGCTGTTGGTCTTC...TGGGTTTGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACTCTGGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR TCA 90 bp AACTACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGTGCTTTCCCAAACCTCAGAATTaGCTGTACCGTCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: NYQIFSSGRMLTFDPECFPKPQN*LYRLQG
Trigger: CCCCTGCAGACGGTACAGTCAATTCTGAGGTTTGGG...AAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430221.5
ENST00000447566.5
CDS-3UTR TCA 90 bp CAGGGGTCCTATGGTCTCCTGAACTTTAATGTGGCTGTGAATCACCTGGGAATGTCTGGGTTTAGTCTATaGCGCCCAAACCTCAGAATT +
Preference number: 4 (lower is better)
Translates to: QGSYGLLNFNVAVNHLGMSGFSL*RPNLRI
Trigger: AATTCTGAGGTTTGGGCGTCATAGACTAAACCCAGA...CATTCCCAGGTGATTCACAGCCACATTAAAGTTCAGGAGACCATAGGACCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp CCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTGAGACACCATTTATTGGGACTTaGCTGACCAGGGCTTGTAAG +
Preference number: 4 (lower is better)
Translates to: PWHSPNVSFREENTNTETPFIGT*LTRACK
Trigger: CTTACAAGCCCTGGTCAGTCAAGTCCCAATAAATGG...TGTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp CAGGGGATAGGTCACCGTGGTGGCAATCGCTTTGGCTACTGCACCAATGATGAAAGGAAGGTTTCCAAATaGAATAACCTCAACCAGATG +
Preference number: 4 (lower is better)
Translates to: QGIGHRGGNRFGYCTNDERKVSK*NNLNQM
Trigger: CATCTGGTTGAGGTTATTTCATTTGGAAACCTTCCT...TTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTGACCTATCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263255.10
CDS-3UTR TCA 90 bp CCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTGAGACAATGGATATGGTACAATaGGTGACAGGAGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PWHSPNVSFREENTNTETMDMVQ*VTGGGK
Trigger: CTTTCCCCCTCCTGTCACTCATTGTACCATATCCAT...TGTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402844.7
CDS-3UTR TCA 90 bp GGTGACAACAGGTCCAGTTGGCCATACTCCCTGTGCACCCTTGGATGCTTTTCATCACACGGTTTGAAGTaGGTATGGATATGGTACAAT +
Preference number: 4 (lower is better)
Translates to: GDNRSSWPYSLCTLGCFSSHGLK*VWIWYN
Trigger: ATTGTACCATATCCATACTCACTTCAAACCGTGTGA...TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402844.7
CDS-3UTR TCA 90 bp CAGAGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAACCCAACTACCCCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: QSGVVSNTLTTPATNPTTPVVEC*PLTQSA
Trigger: AGCACTCTGGGTCAAAGGTCAACATTCTACCACTGG...GGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR TCA 90 bp CACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTTGACCCCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: HSCNKPNYQIFSSGRMLTPVVEC*PLTQSA
Trigger: AGCACTCTGGGTCAAAGGTCAACATTCTACCACTGG...GGTCAACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR GCA 90 bp TTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTCACGGAAGCCATTGGTaGGGCTCCTCGAAGACCCAG +
Preference number: 4 (lower is better)
Translates to: LLVGEEDREYSEDFPMFCHGSHW*GSSKTQ
Trigger: CTGGGTCTTCGAGGAGCCGCACCAATGGCTTCCGTG...ACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR GCA 90 bp CAGGGGTCCTATGGTCTCCTGAACTTTAATGTGGCTGTGAATCACCTGGGAATGGCAATGAGGGAAATGTaGCATTCCATAAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: QGSYGLLNFNVAVNHLGMAMREM*HSIKPR
Trigger: TCTCGGCTTTATGGAATGGCACATTTCCCTCATTGC...CATTCCCAGGTGATTCACAGCCACATTAAAGTTCAGGAGACCATAGGACCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR GCA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCAATCGCTTTGGCTACTaGACCAATGATGAACACATC +
Preference number: 4 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPNRFGY*TNDEHI
Trigger: GATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATT...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR GCA 90 bp TCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTATGGTCTCCTGGCCATACTCCCTGTaGACCCTTGGATGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SIIETNHFFSWVRGPMVSWPYSL*TLGCFS
Trigger: TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCA...GGAGACCATAGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp ACAAAAATAAAGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAGGGGATAGGTCACCGTaGTGGCAATCGCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: TKIKSCPWHSPNVSFREEGDRSP*WQSLWL
Trigger: TAGCCAAAGCGATTGCCACCACGGTGACCTATCCCC...TTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACTTTATTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp CCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTGAGACAATTTGTCCTAGAACCTaGGGGAGAGTTCAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PWHSPNVSFREENTNTETICPRT*GRVQGK
Trigger: CTTTCCCTGAACTCTCCCCCAGGTTCTAGGACAAAT...TGTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp CCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTAAACCACCCTCGATATaGTGCCAGGAGTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PKFCSLKLQSGVYHPEWSKPPSI*CQESFF
Trigger: GAAGAAGGACTCCTGGCACCATATCGAGGGTGGTTT...ACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426396.5
ENST00000427084.5
ENST00000434193.5
ENST00000458600.5
CDS-3UTR CCA 90 bp AGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTAGCAACACATTAACCAAACCACCCTCGATATaGTGCCAGGAGTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SFSLVFTTQSGVVSNTLTKPPSI*CQESFF
Trigger: GAAGAAGGACTCCTGGCACCATATCGAGGGTGGTTT...GGTTAATGTGTTGCTAACAACTCCACTCTGGGTGGTAAACACCAGACTGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427084.5
ENST00000434193.5
ENST00000458600.5
CDS-3UTR CCA 90 bp ACGCCCAAACTGTTCATTCTCTCTTCCACTAGCTCCATAAGGGCAGGGATTATGGAGACTGGAAATCACTaGAAACCACCCTCGATATGG +
Preference number: 4 (lower is better)
Translates to: TPKLFILSSTSSIRAGIMETGNH*KPPSIW
Trigger: CCATATCGAGGGTGGTTTCCAGTGATTTCCAGTCTC...CATAATCCCTGCCCTTATGGAGCTAGTGGAAGAGAGAATGAACAGTTTGGGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420970.5
CDS-3UTR CCA 90 bp CGATATGGTGCCAGGAGTCCTTCTTCTTTAATGATCTCCAGGAGCACCATGTGTGAGACTGGAAATCACTaGAAACCACCCTCGATATGG +
Preference number: 4 (lower is better)
Translates to: RYGARSPSSLMISRSTMCETGNH*KPPSIW
Trigger: CCATATCGAGGGTGGTTTCCAGTGATTTCCAGTCTC...ACACATGGTGCTCCTGGAGATCATTAAAGAAGAAGGACTCCTGGCACCATATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CCA 90 bp CCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTGAGACAGAGACTGGAAATCACTaGAAACCACCCTCGATATGG +
Preference number: 4 (lower is better)
Translates to: PWHSPNVSFREENTNTETETGNH*KPPSIW
Trigger: CCATATCGAGGGTGGTTTCCAGTGATTTCCAGTCTC...TGTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435456.7
CDS-3UTR CCA 90 bp CCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGGAGCAGCAGAGACTaGAAATCACTGGAAACCACC +
Preference number: 4 (lower is better)
Translates to: PKFCSLKLQSGVYHPEWSWSSRD*KSLETT
Trigger: GGTGGTTTCCAGTGATTTCCAGTCTCTGCTGCTCCA...ACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412879.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR TCA 90 bp AAGACCAACAGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCAACTGGATGGCAGGATTaGAGACCAACAGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: KTNSNEGNVPFHKAEIPSTGWQD*RPTAMR
Trigger: CCTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGT...TGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCTGTTGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR TCA 90 bp CCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTGAGACATCTGGGTTTAGTCTATaGCGCCCAAACCTCAGAATT +
Preference number: 4 (lower is better)
Translates to: PWHSPNVSFREENTNTETSGFSL*RPNLRI
Trigger: AATTCTGAGGTTTGGGCGTCATAGACTAAACCCAGA...TGTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp CTCTTGAGCATCTTCGGAATTTTTCATGGGAAGGCGTCTCAGTGTTGGTGTGCATCTGGGTTTAGTCTATaGCGCCCAAACCTCAGAATT +
Preference number: 4 (lower is better)
Translates to: LLSIFGIFHGKASQCWCASGFSL*RPNLRI
Trigger: AATTCTGAGGTTTGGGCGTCATAGACTAAACCCAGA...TGCACACCAACACTGAGACGCCTTCCCATGAAAAATTCCGAAGATGCTCAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR TCA 90 bp AGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACAAGGAAACCTCCCTCTTaGGCATCTTCGGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: SHARGTALMLVLGRKTPTRKPPS*ASSEFF
Trigger: GAAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCT...TGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp TACCGTCTGATGGACCACACTGAGCAACAGGACTCTAAGGAAGGTTTCCAAATGAGGAAACCTCCCTCTTaGGCATCTTCGGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: YRLMDHTEQQDSKEGFQMRKPPS*ASSEFF
Trigger: GAAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCT...CATTTGGAAACCTTCCTTAGAGTCCTGTTGCTCAGTGTGGTCCATCAGACGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp GGTGACAACAGGTCCAGTTGGCCATACTCCCTGTGCACCCTTGGATGCTTTTCAGGAAAACACCAACACTaGGACATACAAAAGTATTTG +
Preference number: 4 (lower is better)
Translates to: GDNRSSWPYSLCTLGCFSGKHQH*DIQKYL
Trigger: CAAATACTTTTGTATGTCTCAGTGTTGGTGTTTTCC...TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp CCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTGAGACATTATTGGGACTTGACTaGCCAGGGCTTGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: PWHSPNVSFREENTNTETLLGLD*PGLVRM
Trigger: CATTCTTACAAGCCCTGGTCAGTCAAGTCCCAATAA...TGTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp AGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCATCGCGAATGCCATTTATTGGGACTTaGCTGACCAGGGCTTGTAAG +
Preference number: 4 (lower is better)
Translates to: SNEGNVPFHKAEIPSSRMPFIGT*LTRACK
Trigger: CTTACAAGCCCTGGTCAGTCAAGTCCCAATAAATGG...CATTCGCGATGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263255.10
CDS-3UTR TCA 90 bp ATTCCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGCCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: IPKFCSLKLQSGVYHPEWPVVEC*PLTQSA
Trigger: AGCACTCTGGGTCAAAGGTCAACATTCTACCACTGG...CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR TCA 90 bp AAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGCCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: KPNYQIFSSGRMLTFDPEPVVEC*PLTQSA
Trigger: AGCACTCTGGGTCAAAGGTCAACATTCTACCACTGG...CTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR TCA 90 bp TGCCAGGAGTCCTTCTTCTTTAATGATCTCCAGGAGCACCATGTGTGTAGTTTTCCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: CQESFFFNDLQEHHVCSFPVVEC*PLTQSA
Trigger: AGCACTCTGGGTCAAAGGTCAACATTCTACCACTGG...AAAACTACACACATGGTGCTCCTGGAGATCATTAAAGAAGAAGGACTCCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR TCA 90 bp AAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTCCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: KFCSLKLQSGVYHPEWSCPVVEC*PLTQSA
Trigger: AGCACTCTGGGTCAAAGGTCAACATTCTACCACTGG...ACAACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR TCA 90 bp ACGCCCAAACTGTTCATTCTCTCTTCCACTAGCTCCATAAGGGCAGGGATTATGTCTGGGTTTAGTCTATaGCGCCCAAACTGTTCATTC +
Preference number: 4 (lower is better)
Translates to: TPKLFILSSTSSIRAGIMSGFSL*RPNCSF
Trigger: GAATGAACAGTTTGGGCGTCATAGACTAAACCCAGA...CATAATCCCTGCCCTTATGGAGCTAGTGGAAGAGAGAATGAACAGTTTGGGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420970.5
CDS-3UTR TCA 90 bp TACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGTGCTTTGAGATATGGTGCCAGGCCTaGAGTCGAAGTCTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: YQIFSSGRMLTFDPECFEIWCQA*SRSLAV
Trigger: TACAGCTAGACTTCGACTTCAGGCCTGGCACCATAT...CTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412879.5
CDS-3UTR GCA 90 bp TTATTCCAAAACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACCACGGAAGCCATTGGTaGGGCTCCTCGAAGACCCAG +
Preference number: 4 (lower is better)
Translates to: LFQNVLLVGEEDREYSEDHGSHW*GSSKTQ
Trigger: CTGGGTCTTCGAGGAGCCGCACCAATGGCTTCCGTG...GTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTTGGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000447566.5
CDS-3UTR GCA 90 bp ACGCCCAAACTGTTCATTCTCTCTTCCACTAGCTCCATAAGGGCAGGGATTATGGCAATGAGGGAAATGTaGCATTCCATAAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: TPKLFILSSTSSIRAGIMAMREM*HSIKPR
Trigger: TCTCGGCTTTATGGAATGGCACATTTCCCTCATTGC...CATAATCCCTGCCCTTATGGAGCTAGTGGAAGAGAGAATGAACAGTTTGGGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420970.5
CDS-3UTR GCA 90 bp GGTGACAACAGGTCCAGTTGGCCATACTCCCTGTGCACCCTTGGATGCTTTTCATTTTTCCCATCTGGTTaGAAACTCAACGTAATACCT +
Preference number: 4 (lower is better)
Translates to: GDNRSSWPYSLCTLGCFSFFPSG*KLNVIP
Trigger: AGGTATTACGTTGAGTTTGCAACCAGATGGGAAAAA...TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR GCA 90 bp ACCACCCAGAGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAACCCACACATTAACCACTCCTaGAACAAACCCAACTACCAG +
Preference number: 4 (lower is better)
Translates to: TTQSGVVSNTLTTPATNPHINHS*NKPNYQ
Trigger: CTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTG...TGGGTTTGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACTCTGGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CCA 90 bp TATTCCAAAACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTCAGCACGGAAGCCATTaGTGCGGCTCCTCGAAGACC +
Preference number: 4 (lower is better)
Translates to: YSKTSYSLVKKIENIPKTQHGSH*CGSSKT
Trigger: GGTCTTCGAGGAGCCGCACCAATGGCTTCCGTGCTG...AGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTTGGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000447566.5
CDS-3UTR CCA 90 bp GCACCAATGATGAACACATCCAAGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCGGGGATAGGTCACCGTaGTGGCAATCGCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: APMMNTSKEESFIRFFKSGDRSP*WQSLWL
Trigger: TAGCCAAAGCGATTGCCACCACGGTGACCTATCCCC...GCTTTTAAAGAAACGGATGAAGCTTTCTTCCTTGGATGTGTTCATCATTGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CCA 90 bp TTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTAAGGCGTCTCAGTGTTaGTGTGCACGCTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LLVGEEDREYSEDFPMFCKASQC*CARFSP
Trigger: GGGGCTGAAGCGTGCACACCAACACTGAGACGCCTT...ACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR CCA 90 bp CCAGGGCTTGTAAGAATGGACACAAAACTTCAAGTCTTTCGTAATGAAAGGATTAAGGCGTCTCAGTGTTaGTGTGCACGCTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PGLVRMDTKLQVFRNERIKASQC*CARFSP
Trigger: GGGGCTGAAGCGTGCACACCAACACTGAGACGCCTT...AATCCTTTCATTACGAAAGACTTGAAGTTTTGTGTCCATTCTTACAAGCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp AAAACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAAAAGGCGTCTCAGTGTTaGTGTGCACGCTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KTSYSLVKKIENIPKTSQKASQC*CARFSP
Trigger: GGGGCTGAAGCGTGCACACCAACACTGAGACGCCTT...TTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR CCA 90 bp AGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTTCGGAATTTTTCATaGGAAGGCGTCTCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: SHARGTALMLVLGRKTPTLRNFS*EGVSVL
Trigger: CAACACTGAGACGCCTTCCCATGAAAAATTCCGAAG...TGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp CCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTGAGACACTTCGGAATTTTTCATaGGAAGGCGTCTCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: PWHSPNVSFREENTNTETLRNFS*EGVSVL
Trigger: CAACACTGAGACGCCTTCCCATGAAAAATTCCGAAG...TGTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp TTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTAGCACTTCGGAATTTTTCATaGGAAGGCGTCTCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: LLLEASVWCLPPRVELLALRNFS*EGVSVL
Trigger: CAACACTGAGACGCCTTCCCATGAAAAATTCCGAAG...TGCTAACAACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR CCA 90 bp CCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTGAGACAATAAAGTCATGCCCGTaGCACAGCCCTAATGTTAGT +
Preference number: 4 (lower is better)
Translates to: PWHSPNVSFREENTNTETIKSCP*HSPNVS
Trigger: ACTAACATTAGGGCTGTGCCACGGGCATGACTTTAT...TGTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp ATCTTGATGTCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTAGGATTCAGAAACTCTaGGTTGCGTGCCCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: ILMSIIETNHFFSWVRGPRIQKL*VACPAS
Trigger: GCTTGCTGGGCACGCAACCCAGAGTTTCTGAATCCT...AGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGACATCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp ACAAAAATAAAGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAGGATTCAGAAACTCTaGGTTGCGTGCCCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: TKIKSCPWHSPNVSFREERIQKL*VACPAS
Trigger: GCTTGCTGGGCACGCAACCCAGAGTTTCTGAATCCT...TTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACTTTATTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp TCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTATGGTCTCCAATCACTTCTTCTCATaGGTCAGGGGTCCTATGGTC +
Preference number: 4 (lower is better)
Translates to: SIIETNHFFSWVRGPMVSNHFFS*VRGPMV
Trigger: GACCATAGGACCCCTGACCCATGAGAAGAAGTGATT...GGAGACCATAGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp ACAAAAATAAAGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAATTGCTGATAGCAAAATaGCTGGCGGCAGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: TKIKSCPWHSPNVSFREELLIAK*LAAAAL
Trigger: GAGAGCTGCTGCCGCCAGCCATTTTGCTATCAGCAA...TTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACTTTATTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402844.7
CDS-3UTR CCA 90 bp ATTCCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAAACCACCCTCGATATaGTGCCAGGAGTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: IPKFCSLKLQSGVYHPEWKPPSI*CQESFF
Trigger: GAAGAAGGACTCCTGGCACCATATCGAGGGTGGTTT...CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426396.5
ENST00000427084.5
ENST00000434193.5
ENST00000458600.5
CDS-3UTR CCA 90 bp AGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCATCGCGAATGGAGACTGGAAATCACTaGAAACCACCCTCGATATGG +
Preference number: 4 (lower is better)
Translates to: SNEGNVPFHKAEIPSSRMETGNH*KPPSIW
Trigger: CCATATCGAGGGTGGTTTCCAGTGATTTCCAGTCTC...CATTCGCGATGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CCA 90 bp CACATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGATGGAGCAGCAGAGACTaGAAATCACTGGAAACCACC +
Preference number: 4 (lower is better)
Translates to: HINHSCNKPNYQIFSSGRWSSRD*KSLETT
Trigger: GGTGGTTTCCAGTGATTTCCAGTCTCTGCTGCTCCA...TCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CCA 90 bp TGCCAGGAGTCCTTCTTCTTTAATGATCTCCAGGAGCACCATGTGTGTAGTTTTTGGAGCAGCAGAGACTaGAAATCACTGGAAACCACC +
Preference number: 4 (lower is better)
Translates to: CQESFFFNDLQEHHVCSFWSSRD*KSLETT
Trigger: GGTGGTTTCCAGTGATTTCCAGTCTCTGCTGCTCCA...AAAACTACACACATGGTGCTCCTGGAGATCATTAAAGAAGAAGGACTCCTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
3UTR CAA 72 bp GAATCACTTCTCTTCACTCAGGAGGAAACCTCCCTCTaGAGCATCTTCGGAATTTTTCATGGGAAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: ESLLFTQEETSL*SIFGIFHGKAS
Trigger: AGACGCCTTCCCATGAAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCTCCTGAGTGAAGAGAAGTGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR TCA 90 bp TACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGTGCTTTGAGGAAGACCAACAGCAATaGGGGAAATGTGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: YQIFSSGRMLTFDPECFEEDQQQ*GKCAIP
Trigger: TGGAATGGCACATTTCCCTCATTGCTGTTGGTCTTC...CTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR TCA 90 bp AACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAACTGGATGGCAGGATTaGAGACCAACAGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: NKPNYQIFSSGRMLTFDPTGWQD*RPTAMR
Trigger: CCTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGT...TGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR TCA 90 bp ACCAACAGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCATCGTCTGGGTTTAGTCTATaGCGCCCAAACCTCAGAATT +
Preference number: 4 (lower is better)
Translates to: TNSNEGNVPFHKAEIPSSSGFSL*RPNLRI
Trigger: AATTCTGAGGTTTGGGCGTCATAGACTAAACCCAGA...CGATGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCTGTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000430221.5
ENST00000447566.5
CDS-3UTR TCA 90 bp GAGCCAGAGTCAAGGGAGAATCACTTCTCTTCACTCAGGAGGAAACCTCCCTCTGGAAAACACCAACACTaGGACATACAAAAGTATTTG +
Preference number: 4 (lower is better)
Translates to: EPESRENHFSSLRRKPPSGKHQH*DIQKYL
Trigger: CAAATACTTTTGTATGTCTCAGTGTTGGTGTTTTCC...AGAGGGAGGTTTCCTCCTGAGTGAAGAGAAGTGATTCTCCCTTGACTCTGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp CAGGGGTCCTATGGTCTCCTGAACTTTAATGTGGCTGTGAATCACCTGGGAATGAGGAAGGTTTCCAAATaGAATAACCTCAACCAGATG +
Preference number: 4 (lower is better)
Translates to: QGSYGLLNFNVAVNHLGMRKVSK*NNLNQM
Trigger: CATCTGGTTGAGGTTATTTCATTTGGAAACCTTCCT...CATTCCCAGGTGATTCACAGCCACATTAAAGTTCAGGAGACCATAGGACCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp ACAAAAATAAAGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAATATGGTACAATGAGTaGCAGGAGGGGGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: TKIKSCPWHSPNVSFREEIWYNE*QEGERW
Trigger: CCACCTTTCCCCCTCCTGTCACTCATTGTACCATAT...TTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACTTTATTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000402844.7
CDS-3UTR TCA 90 bp AACACATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTACCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: NTLTTPATNPTTRSFPVVPVVEC*PLTQSA
Trigger: AGCACTCTGGGTCAAAGGTCAACATTCTACCACTGG...TACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR TCA 90 bp ATCTTGATGTCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTCCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: ILMSIIETNHFFSWVRGPPVVEC*PLTQSA
Trigger: AGCACTCTGGGTCAAAGGTCAACATTCTACCACTGG...AGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGACATCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435456.7
CDS-3UTR TCA 90 bp AACTACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGTGCTTTCCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: NYQIFSSGRMLTFDPECFPVVEC*PLTQSA
Trigger: AGCACTCTGGGTCAAAGGTCAACATTCTACCACTGG...AAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR GCA 90 bp ACGCCCAAACTGTTCATTCTCTCTTCCACTAGCTCCATAAGGGCAGGGATTATGAATCGCTTTGGCTACTaGACCAATGATGAACACATC +
Preference number: 4 (lower is better)
Translates to: TPKLFILSSTSSIRAGIMNRFGY*TNDEHI
Trigger: GATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATT...CATAATCCCTGCCCTTATGGAGCTAGTGGAAGAGAGAATGAACAGTTTGGGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420970.5
CDS-3UTR GCA 90 bp AGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACAAATCGCTTTGGCTACTaGACCAATGATGAACACATC +
Preference number: 4 (lower is better)
Translates to: SHARGTALMLVLGRKTPTNRFGY*TNDEHI
Trigger: GATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATT...TGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR GCA 90 bp TCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTATGGTCTCCCACATTAACCACTCCTaGAACAAACCCAACTACCAG +
Preference number: 4 (lower is better)
Translates to: SIIETNHFFSWVRGPMVSHINHS*NKPNYQ
Trigger: CTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTG...GGAGACCATAGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435456.7
CDS-3UTR CCA 90 bp CATCCAAGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCTGCCGTTTTAAACCTTGACAACAGGTCCAGTTaGCCATACTCCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: HPRKKASSVSLKAAVLNLDNRSS*PYSLCT
Trigger: GGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTC...AAGGTTTAAAACGGCAGCTTTTAAAGAAACGGATGAAGCTTTCTTCCTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR CCA 90 bp CCAGGGCTTGTAAGAATGGACACAAAACTTCAAGTCTTTCGTAATGAAAGGATTGACAACAGGTCCAGTTaGCCATACTCCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: PGLVRMDTKLQVFRNERIDNRSS*PYSLCT
Trigger: GGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTC...AATCCTTTCATTACGAAAGACTTGAAGTTTTGTGTCCATTCTTACAAGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp TTCTGTTTTCTGGGTTTAGTCTATGACGCCCAAACCTCAGAATTGACTGTACCGATTTGTCCTAGAACCTaGGGGAGAGTTCAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: FCFLGLVYDAQTSELTVPICPRT*GRVQGK
Trigger: CTTTCCCTGAACTCTCCCCCAGGTTCTAGGACAAAT...CGGTACAGTCAATTCTGAGGTTTGGGCGTCATAGACTAAACCCAGAAAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263255.10
CDS-3UTR CCA 90 bp ATTCCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGGAGACTGGAAATCACTaGAAACCACCCTCGATATGG +
Preference number: 4 (lower is better)
Translates to: IPKFCSLKLQSGVYHPEWETGNH*KPPSIW
Trigger: CCATATCGAGGGTGGTTTCCAGTGATTTCCAGTCTC...CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412879.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CCA 90 bp TGCCAGGAGTCCTTCTTCTTTAATGATCTCCAGGAGCACCATGTGTGTAGTTTTGAGACTGGAAATCACTaGAAACCACCCTCGATATGG +
Preference number: 4 (lower is better)
Translates to: CQESFFFNDLQEHHVCSFETGNH*KPPSIW
Trigger: CCATATCGAGGGTGGTTTCCAGTGATTTCCAGTCTC...AAAACTACACACATGGTGCTCCTGGAGATCATTAAAGAAGAAGGACTCCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CCA 90 bp AACACATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTATGGAGCAGCAGAGACTaGAAATCACTGGAAACCACC +
Preference number: 4 (lower is better)
Translates to: NTLTTPATNPTTRSFPVVWSSRD*KSLETT
Trigger: GGTGGTTTCCAGTGATTTCCAGTCTCTGCTGCTCCA...TACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CCA 90 bp ATCTTGATGTCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTTGGAGCAGCAGAGACTaGAAATCACTGGAAACCACC +
Preference number: 4 (lower is better)
Translates to: ILMSIIETNHFFSWVRGPWSSRD*KSLETT
Trigger: GGTGGTTTCCAGTGATTTCCAGTCTCTGCTGCTCCA...AGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGACATCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435456.7
CDS-3UTR CCA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCAGAAATAGACAAAATTaGAGCAGCAGAGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPRNRQN*SSRDWK
Trigger: TTTCCAGTCTCTGCTGCTCCAATTTTGTCTATTTCT...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435456.7
ENST00000447566.5
CDS-3UTR TCA 90 bp AACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAAGACCAACAGCAATaGGGGAAATGTGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: NKPNYQIFSSGRMLTFDPEDQQQ*GKCAIP
Trigger: TGGAATGGCACATTTCCCTCATTGCTGTTGGTCTTC...TGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR TCA 90 bp ACAAAAATAAAGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAGAAGACCAACAGCAATaGGGGAAATGTGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: TKIKSCPWHSPNVSFREEEDQQQ*GKCAIP
Trigger: TGGAATGGCACATTTCCCTCATTGCTGTTGGTCTTC...TTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACTTTATTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp AAACTGTTCATTCTCTCTTCCACTAGCTCCATAAGGGCAGGGATTATGACTTTTACTGGATGGCAGGATTaGAGACCAACAGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: KLFILSSTSSIRAGIMTFTGWQD*RPTAMR
Trigger: CCTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGT...AAAAGTCATAATCCCTGCCCTTATGGAGCTAGTGGAAGAGAGAATGAACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420970.5
CDS-3UTR TCA 90 bp GGTAGAATGTTGACCTTTGACCCAGAGTGCTTTGAGGCTATTAAAAGTGTAGAAACTGGATGGCAGGATTaGAGACCAACAGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: GRMLTFDPECFEAIKSVETGWQD*RPTAMR
Trigger: CCTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGT...TTCTACACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427084.5
ENST00000458600.5
CDS-3UTR TCA 90 bp GCACCAATGATGAACACATCCAAGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCACTGGATGGCAGGATTaGAGACCAACAGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: APMMNTSKEESFIRFFKSTGWQD*RPTAMR
Trigger: CCTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGT...GCTTTTAAAGAAACGGATGAAGCTTTCTTCCTTGGATGTGTTCATCATTGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR TCA 90 bp TACACCAAGTTTATAAAGGGAGATAATATCCAGACCTCAACAAGATATCTGCTCCCCAAACCTCAGAATTaGCTGTACCGTCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: YTKFIKGDNIQTSTRYLLPKPQN*LYRLQG
Trigger: CCCCTGCAGACGGTACAGTCAATTCTGAGGTTTGGG...GAGCAGATATCTTGTTGAGGTCTGGATATTATCTCCCTTTATAAACTTGGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp ATTCCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGTCTGGGTTTAGTCTATaGCGCCCAAACCTCAGAATT +
Preference number: 4 (lower is better)
Translates to: IPKFCSLKLQSGVYHPEWSGFSL*RPNLRI
Trigger: AATTCTGAGGTTTGGGCGTCATAGACTAAACCCAGA...CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000430221.5
ENST00000447566.5
CDS-3UTR TCA 90 bp CAACACATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGGAAACCTCCCTCTTaGGCATCTTCGGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: QHINHSCNKPNYQIFSSGRKPPS*ASSEFF
Trigger: GAAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCT...ACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447566.5
CDS-3UTR TCA 90 bp ATTCCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGTTATTGGGACTTGACTaGCCAGGGCTTGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: IPKFCSLKLQSGVYHPEWLLGLD*PGLVRM
Trigger: CATTCTTACAAGCCCTGGTCAGTCAAGTCCCAATAA...CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263255.10
CDS-3UTR GCA 90 bp TTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTAGCAACACATTAACCACTGCAATGAGGGAAATGTaGCATTCCATAAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: FSLVFTTQSGVVSNTLTTAMREM*HSIKPR
Trigger: TCTCGGCTTTATGGAATGGCACATTTCCCTCATTGC...AGTGGTTAATGTGTTGCTAACAACTCCACTCTGGGTGGTAAACACCAGACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR GCA 90 bp AGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCATCGCGAATGAATCGCTTTGGCTACTaGACCAATGATGAACACATC +
Preference number: 4 (lower is better)
Translates to: SNEGNVPFHKAEIPSSRMNRFGY*TNDEHI
Trigger: GATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATT...CATTCGCGATGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR GCA 90 bp CAGAGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAACCCAACTACCAATCGCTTTGGCTACTaGACCAATGATGAACACATC +
Preference number: 4 (lower is better)
Translates to: QSGVVSNTLTTPATNPTTNRFGY*TNDEHI
Trigger: GATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATT...GGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR GCA 90 bp CCAGGGCTTGTAAGAATGGACACAAAACTTCAAGTCTTTCGTAATGAAAGGATTGTCTCAGTGTTGGTGTaGACGCTTCAGCCCCATAAC +
Preference number: 4 (lower is better)
Translates to: PGLVRMDTKLQVFRNERIVSVLV*TLQPHN
Trigger: GTTATGGGGCTGAAGCGTGCACACCAACACTGAGAC...AATCCTTTCATTACGAAAGACTTGAAGTTTTGTGTCCATTCTTACAAGCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR GCA 90 bp TTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTAGCAACCTTTGACCCAGAGTaGTTTGAGGCTATTAAAAGT +
Preference number: 4 (lower is better)
Translates to: LLLEASVWCLPPRVELLATFDPE*FEAIKS
Trigger: ACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGT...TGCTAACAACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR GCA 90 bp CACATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGACACATTAACCACTCCTaGAACAAACCCAACTACCAG +
Preference number: 4 (lower is better)
Translates to: HINHSCNKPNYQIFSSGRHINHS*NKPNYQ
Trigger: CTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTG...TCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR GCA 90 bp AAGACCAACAGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCACACATTAACCACTCCTaGAACAAACCCAACTACCAG +
Preference number: 4 (lower is better)
Translates to: KTNSNEGNVPFHKAEIPSHINHS*NKPNYQ
Trigger: CTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTG...TGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCTGTTGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR GCA 90 bp AAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGCACATTAACCACTCCTaGAACAAACCCAACTACCAG +
Preference number: 4 (lower is better)
Translates to: KPNYQIFSSGRMLTFDPEHINHS*NKPNYQ
Trigger: CTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTG...CTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CCA 90 bp GACCCAGAGTGCTTTGAGGCTATTAAAAGTGTAGAAATAGACAAAATTGGAGCAGATAGGTCACCGTGGTaGCAATCGCTTTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: DPECFEAIKSVEIDKIGADRSPW*QSLWLL
Trigger: CAGTAGCCAAAGCGATTGCCACCACGGTGACCTATC...TGCTCCAATTTTGTCTATTTCTACACTTTTAATAGCCTCAAAGCACTCTGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427084.5
CDS-3UTR CCA 90 bp GAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTCTGGGTTTAGTCGATAGGTCACCGTGGTaGCAATCGCTTTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: EDREYSEDFPMFCFLGLVDRSPW*QSLWLL
Trigger: CAGTAGCCAAAGCGATTGCCACCACGGTGACCTATC...GACTAAACCCAGAAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CCA 90 bp CCATTATTCCAAAACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGGGGATAGGTCACCGTaGTGGCAATCGCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: PLFQNVLLVGEEDREYSEGDRSP*WQSLWL
Trigger: TAGCCAAAGCGATTGCCACCACGGTGACCTATCCCC...TTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTTGGAATAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000447566.5
CDS-3UTR CCA 90 bp ATTCCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGCTTCGGAATTTTTCATaGGAAGGCGTCTCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: IPKFCSLKLQSGVYHPEWLRNFS*EGVSVL
Trigger: CAACACTGAGACGCCTTCCCATGAAAAATTCCGAAG...CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR CCA 90 bp TTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTAGGATTCAGAAACTCTaGGTTGCGTGCCCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LLVGEEDREYSEDFPMFCRIQKL*VACPAS
Trigger: GCTTGCTGGGCACGCAACCCAGAGTTTCTGAATCCT...ACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263255.10
CDS-3UTR CCA 90 bp ATCTTGATGTCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTAATCACTTCTTCTCATaGGTCAGGGGTCCTATGGTC +
Preference number: 4 (lower is better)
Translates to: ILMSIIETNHFFSWVRGPNHFFS*VRGPMV
Trigger: GACCATAGGACCCCTGACCCATGAGAAGAAGTGATT...AGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGACATCAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp TTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTGAGACTGGAAATCACTaGAAACCACCCTCGATATGG +
Preference number: 4 (lower is better)
Translates to: LTTPATNPTTRSFPVVECETGNH*KPPSIW
Trigger: CCATATCGAGGGTGGTTTCCAGTGATTTCCAGTCTC...ACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CCA 90 bp TCTATGACGCCCAAACTGTTCATTCTCTCTTCCACTAGCTCCATAAGGGCAGGGAGAAATAGACAAAATTaGAGCAGCAGAGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: SMTPKLFILSSTSSIRAGRNRQN*SSRDWK
Trigger: TTTCCAGTCTCTGCTGCTCCAATTTTGTCTATTTCT...CCCTGCCCTTATGGAGCTAGTGGAAGAGAGAATGAACAGTTTGGGCGTCATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420970.5
CDS-3UTR CCA 90 bp AAATTGGAGCAGCAGAGACTGGAAATCACTGGAAACCACCCTCGATATGGTGCCAGAAATAGACAAAATTaGAGCAGCAGAGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: KLEQQRLEITGNHPRYGARNRQN*SSRDWK
Trigger: TTTCCAGTCTCTGCTGCTCCAATTTTGTCTATTTCT...GGCACCATATCGAGGGTGGTTTCCAGTGATTTCCAGTCTCTGCTGCTCCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR TCA 90 bp ATTCCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGCTTTTCTCATCAACCTaGAGTCGAAGTCTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: IPKFCSLKLQSGVYHPEWLFSST*SRSLAV
Trigger: TACAGCTAGACTTCGACTTCAGGTTGATGAGAAAAG...CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000426396.5
CDS-3UTR TCA 90 bp ATCTTGATGTCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTTTATTGGGACTTGACTaGCCAGGGCTTGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: ILMSIIETNHFFSWVRGPLLGLD*PGLVRM
Trigger: CATTCTTACAAGCCCTGGTCAGTCAAGTCCCAATAA...AGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGACATCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp ATCTTGATGTCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTACATTAACCACTCCCTaGAGTCGAAGTCTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: ILMSIIETNHFFSWVRGPTLTTP*SRSLAV
Trigger: TACAGCTAGACTTCGACTTCAGGGAGTGGTTAATGT...AGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGACATCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544408.5
CDS-3UTR GCA 90 bp ACAAAAATAAAGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAGCAATGAGGGAAATGTaGCATTCCATAAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: TKIKSCPWHSPNVSFREEAMREM*HSIKPR
Trigger: TCTCGGCTTTATGGAATGGCACATTTCCCTCATTGC...TTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACTTTATTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR GCA 90 bp AACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGCAATGAGGGAAATGTaGCATTCCATAAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: NKPNYQIFSSGRMLTFDPAMREM*HSIKPR
Trigger: TCTCGGCTTTATGGAATGGCACATTTCCCTCATTGC...TGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR GCA 90 bp CAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGTGCTTTGAGGCTACCTTTGACCCAGAGTaGTTTGAGGCTATTAAAAGT +
Preference number: 4 (lower is better)
Translates to: QIFSSGRMLTFDPECFEATFDPE*FEAIKS
Trigger: ACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGT...AGCCTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR GCA 90 bp TTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTCACATTAACCACTCCTaGAACAAACCCAACTACCAG +
Preference number: 4 (lower is better)
Translates to: LTTPATNPTTRSFPVVECHINHS*NKPNYQ
Trigger: CTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTG...ACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR GCA 90 bp TTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTCTGGTTATTTACCACTGCATaGCCAGGTCCTCCCACAGTG +
Preference number: 4 (lower is better)
Translates to: LVKKIENIPKTSQCSVFWLFTTA*PGPPTV
Trigger: CACTGTGGGAGGACCTGGGCATGCAGTGGTAAATAA...CCAGAAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420970.5
CDS-3UTR GCA 90 bp TTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTAGCAACACATTAACCACTACCTTTGACCCAGAGTaGTTTGAGGCTTTGAATTAC +
Preference number: 4 (lower is better)
Translates to: FSLVFTTQSGVVSNTLTTTFDPE*FEALNY
Trigger: GTAATTCAAAGCCTCAAAGCACTCTGGGTCAAAGGT...AGTGGTTAATGTGTTGCTAACAACTCCACTCTGGGTGGTAAACACCAGACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443810.5
CDS-3UTR GCA 90 bp CAAAATTGGAGCAGCAGAGACTGGAAATCACTGGAAACCACCCTCGATATGGTGTCAATCATCTCTTCATaGAAGTTCTGGCATAGGTTT +
Preference number: 4 (lower is better)
Translates to: QNWSSRDWKSLETTLDMVSIISS*KFWHRF
Trigger: AAACCTATGCCAGAACTTGCATGAAGAGATGATTGA...CACCATATCGAGGGTGGTTTCCAGTGATTTCCAGTCTCTGCTGCTCCAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CCA 90 bp CCTCTTGAGCATCTTCGGAATTTTTCATGGGAAGGCGTCTCAGTGTTGGTGTGCACCTTTGTAGTTTGTTaGTACAATGTCTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: PLEHLRNFSWEGVSVLVCTFVVC*YNVFIP
Trigger: AGGAATGAAGACATTGTACCAACAAACTACAAAGGT...GCACACCAACACTGAGACGCCTTCCCATGAAAAATTCCGAAGATGCTCAAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR CCA 90 bp GATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTCTGGGTTTAGTCTATGATAGGTCACCGTGGTaGCAATCGCTTTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: DREYSEDFPMFCFLGLVYDRSPW*QSLWLL
Trigger: CAGTAGCCAAAGCGATTGCCACCACGGTGACCTATC...ATAGACTAAACCCAGAAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CCA 90 bp ACAAAAATAAAGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAATAAAGTCATGCCCGTaGCACAGCCCTAATGTTAGT +
Preference number: 4 (lower is better)
Translates to: TKIKSCPWHSPNVSFREEIKSCP*HSPNVS
Trigger: ACTAACATTAGGGCTGTGCCACGGGCATGACTTTAT...TTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACTTTATTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp ATCTTGATGTCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTATAAAGTCATGCCCGTaGCACAGCCCTAATGTTAGT +
Preference number: 4 (lower is better)
Translates to: ILMSIIETNHFFSWVRGPIKSCP*HSPNVS
Trigger: ACTAACATTAGGGCTGTGCCACGGGCATGACTTTAT...AGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGACATCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp AGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACAGTGATTTTTCCCATCTaGTTGCAAACTCAACGTAAT +
Preference number: 4 (lower is better)
Translates to: SHARGTALMLVLGRKTPTVIFPI*LQTQRN
Trigger: ATTACGTTGAGTTTGCAACCAGATGGGAAAAATCAC...TGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp GAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTCTGGGTTTAGTCAAACCACCCTCGATATaGTGCCAGGAGTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: EDREYSEDFPMFCFLGLVKPPSI*CQESFF
Trigger: GAAGAAGGACTCCTGGCACCATATCGAGGGTGGTTT...GACTAAACCCAGAAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420970.5
CDS-3UTR CCA 90 bp TCCAAGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCTGCCGTTTTAAACCTTCAAAACCACCCTCGATATaGTGCCAGGAGTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SKEESFIRFFKSCRFKPSKPPSI*CQESFF
Trigger: GAAGAAGGACTCCTGGCACCATATCGAGGGTGGTTT...TGAAGGTTTAAAACGGCAGCTTTTAAAGAAACGGATGAAGCTTTCTTCCTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427084.5
CDS-3UTR CCA 90 bp TTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTCTGGTGGAGCAGCAGAGACTaGAAATCACTGGAAACCACC +
Preference number: 4 (lower is better)
Translates to: LVKKIENIPKTSQCSVFWWSSRD*KSLETT
Trigger: GGTGGTTTCCAGTGATTTCCAGTCTCTGCTGCTCCA...CCAGAAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420970.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CCA 90 bp AAAACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGGAGCAGCAGAGACTaGAAATCACTGGAAACCACC +
Preference number: 4 (lower is better)
Translates to: KTSYSLVKKIENIPKTSQWSSRD*KSLETT
Trigger: GGTGGTTTCCAGTGATTTCCAGTCTCTGCTGCTCCA...TTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420970.5
ENST00000447566.5
3UTR CAA 72 bp TGTTGGTACAATGTCTTCATTCCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: CWYNVFIPKFCS*KLQSGVYHPEW
Trigger: CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAATGAAGACATTGTACCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
3UTR CAA 72 bp AAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGCTTTGAGGCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: KPNYQIFSSGRM*TFDPECFEALN
Trigger: ATTCAAAGCCTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443810.5
CDS-3UTR TCA 90 bp TTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTCTGGGAAGACCAACAGCAATaGGGGAAATGTGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: LVKKIENIPKTSQCSVFWEDQQQ*GKCAIP
Trigger: TGGAATGGCACATTTCCCTCATTGCTGTTGGTCTTC...CCAGAAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR TCA 90 bp CCAGGGCTTGTAAGAATGGACACAAAACTTCAAGTCTTTCGTAATGAAAGGATTGAAGACCAACAGCAATaGGGGAAATGTGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: PGLVRMDTKLQVFRNERIEDQQQ*GKCAIP
Trigger: TGGAATGGCACATTTCCCTCATTGCTGTTGGTCTTC...AATCCTTTCATTACGAAAGACTTGAAGTTTTGTGTCCATTCTTACAAGCCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp CATCCAAGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCTGCCGTTTTAAACCTTGAAGACCAACAGCAATaGGGGAAATGTGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: HPRKKASSVSLKAAVLNLEDQQQ*GKCAIP
Trigger: TGGAATGGCACATTTCCCTCATTGCTGTTGGTCTTC...AAGGTTTAAAACGGCAGCTTTTAAAGAAACGGATGAAGCTTTCTTCCTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR TCA 90 bp TACACCAAGTTTATAAAGGGAGATAATATCCAGACCTCAACAAGATATCTGCTCACTGGATGGCAGGATTaGAGACCAACAGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: YTKFIKGDNIQTSTRYLLTGWQD*RPTAMR
Trigger: CCTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGT...GAGCAGATATCTTGTTGAGGTCTGGATATTATCTCCCTTTATAAACTTGGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp TCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTATGGTCTCCGGAAAACACCAACACTaGGACATACAAAAGTATTTG +
Preference number: 4 (lower is better)
Translates to: SIIETNHFFSWVRGPMVSGKHQH*DIQKYL
Trigger: CAAATACTTTTGTATGTCTCAGTGTTGGTGTTTTCC...GGAGACCATAGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp CCAGGGCTTGTAAGAATGGACACAAAACTTCAAGTCTTTCGTAATGAAAGGATTCCATTTATTGGGACTTaGCTGACCAGGGCTTGTAAG +
Preference number: 4 (lower is better)
Translates to: PGLVRMDTKLQVFRNERIPFIGT*LTRACK
Trigger: CTTACAAGCCCTGGTCAGTCAAGTCCCAATAAATGG...AATCCTTTCATTACGAAAGACTTGAAGTTTTGTGTCCATTCTTACAAGCCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR GCA 90 bp TCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTATGGTCTCCTTTTTCCCATCTGGTTaGAAACTCAACGTAATACCT +
Preference number: 4 (lower is better)
Translates to: SIIETNHFFSWVRGPMVSFFPSG*KLNVIP
Trigger: AGGTATTACGTTGAGTTTGCAACCAGATGGGAAAAA...GGAGACCATAGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR GCA 90 bp ATTCCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGACCTTTGACCCAGAGTaGTTTGAGGCTATTAAAAGT +
Preference number: 4 (lower is better)
Translates to: IPKFCSLKLQSGVYHPEWTFDPE*FEAIKS
Trigger: ACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGT...CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412879.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR GCA 90 bp TACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGTGCTTTGAGACCTTTGACCCAGAGTaGTTTGAGGCTATTAAAAGT +
Preference number: 4 (lower is better)
Translates to: YQIFSSGRMLTFDPECFETFDPE*FEAIKS
Trigger: ACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGT...CTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR GCA 90 bp TTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTAGCAACACATTAACCACTACCTTTGACCCAGAGTaGTTTGAGGCTATTAAAAGT +
Preference number: 4 (lower is better)
Translates to: FSLVFTTQSGVVSNTLTTTFDPE*FEAIKS
Trigger: ACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGT...AGTGGTTAATGTGTTGCTAACAACTCCACTCTGGGTGGTAAACACCAGACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR GCA 90 bp GCCAGGAGTCCTTCTTCTTTAATGATCTCCAGGAGCACCATGTGTGTAGTTTTGTCAATCATCTCTTCATaGAAGTTCTGGCATAGGTTT +
Preference number: 4 (lower is better)
Translates to: ARSPSSLMISRSTMCVVLSIISS*KFWHRF
Trigger: AAACCTATGCCAGAACTTGCATGAAGAGATGATTGA...CAAAACTACACACATGGTGCTCCTGGAGATCATTAAAGAAGAAGGACTCCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CCA 90 bp ACGCCCAAACTGTTCATTCTCTCTTCCACTAGCTCCATAAGGGCAGGGATTATGACCTTTGTAGTTTGTTaGTACAATGTCTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: TPKLFILSSTSSIRAGIMTFVVC*YNVFIP
Trigger: AGGAATGAAGACATTGTACCAACAAACTACAAAGGT...CATAATCCCTGCCCTTATGGAGCTAGTGGAAGAGAGAATGAACAGTTTGGGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420970.5
CDS-3UTR CCA 90 bp CTCTTGAGCATCTTCGGAATTTTTCATGGGAAGGCGTCTCAGTGTTGGTGTGCAACCTTTGTAGTTTGTTaGTACAATGTCTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: LLSIFGIFHGKASQCWCATFVVC*YNVFIP
Trigger: AGGAATGAAGACATTGTACCAACAAACTACAAAGGT...TGCACACCAACACTGAGACGCCTTCCCATGAAAAATTCCGAAGATGCTCAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR CCA 90 bp CGATATGGTGCCAGGAGTCCTTCTTCTTTAATGATCTCCAGGAGCACCATGTGTACCTTTGTAGTTTGTTaGTACAATGTCTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: RYGARSPSSLMISRSTMCTFVVC*YNVFIP
Trigger: AGGAATGAAGACATTGTACCAACAAACTACAAAGGT...ACACATGGTGCTCCTGGAGATCATTAAAGAAGAAGGACTCCTGGCACCATATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458600.5
CDS-3UTR CCA 90 bp CCAGGGCTTGTAAGAATGGACACAAAACTTCAAGTCTTTCGTAATGAAAGGATTAATCACTTCTTCTCATaGGTCAGGGGTCCTATGGTC +
Preference number: 4 (lower is better)
Translates to: PGLVRMDTKLQVFRNERINHFFS*VRGPMV
Trigger: GACCATAGGACCCCTGACCCATGAGAAGAAGTGATT...AATCCTTTCATTACGAAAGACTTGAAGTTTTGTGTCCATTCTTACAAGCCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp AGAATGTTGACCTTTGACCCAGAGTGCTTTGAGGCTATTAAAAGTGTAGAAATAAAACCACCCTCGATATaGTGCCAGGAGTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RMLTFDPECFEAIKSVEIKPPSI*CQESFF
Trigger: GAAGAAGGACTCCTGGCACCATATCGAGGGTGGTTT...TATTTCTACACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGTCAACATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427084.5
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CCA 90 bp GAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTCTGGGTTTAGTCGAGACTGGAAATCACTaGAAACCACCCTCGATATGG +
Preference number: 4 (lower is better)
Translates to: EDREYSEDFPMFCFLGLVETGNH*KPPSIW
Trigger: CCATATCGAGGGTGGTTTCCAGTGATTTCCAGTCTC...GACTAAACCCAGAAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420970.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CCA 90 bp AGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTAGCAACACATTAACCAGAAATAGACAAAATTaGAGCAGCAGAGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: SFSLVFTTQSGVVSNTLTRNRQN*SSRDWK
Trigger: TTTCCAGTCTCTGCTGCTCCAATTTTGTCTATTTCT...GGTTAATGTGTTGCTAACAACTCCACTCTGGGTGGTAAACACCAGACTGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CCA 90 bp TGGTGCCAGGAGTCCTTCTTCTTTAATGATCTCCAGGAGCACCATGTGTGTAGTTCTTCATGCAAGTTCTaGCATAGGTTTACAATTTCA +
Preference number: 4 (lower is better)
Translates to: WCQESFFFNDLQEHHVCSSSCKF*HRFTIS
Trigger: TGAAATTGTAAACCTATGCCAGAACTTGCATGAAGA...ACTACACACATGGTGCTCCTGGAGATCATTAAAGAAGAAGGACTCCTGGCACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
3UTR CAA 72 bp AAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGCTTTGAGGCTATTAAA +
Preference number: 4 (lower is better)
Translates to: KPNYQIFSSGRM*TFDPECFEAIK
Trigger: TTTAATAGCCTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR TCA 90 bp TATTCCAAAACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTGAAGACCAACAGCAATaGGGGAAATGTGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: YSKTSYSLVKKIENIPKTEDQQQ*GKCAIP
Trigger: TGGAATGGCACATTTCCCTCATTGCTGTTGGTCTTC...AGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTTGGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000447566.5
CDS-3UTR TCA 90 bp CCAGGGCTTGTAAGAATGGACACAAAACTTCAAGTCTTTCGTAATGAAAGGATTAGGAAACCTCCCTCTTaGGCATCTTCGGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: PGLVRMDTKLQVFRNERIRKPPS*ASSEFF
Trigger: GAAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCT...AATCCTTTCATTACGAAAGACTTGAAGTTTTGTGTCCATTCTTACAAGCCCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp ATCTTGATGTCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTAGGAAGGTTTCCAAATaGAATAACCTCAACCAGATG +
Preference number: 4 (lower is better)
Translates to: ILMSIIETNHFFSWVRGPRKVSK*NNLNQM
Trigger: CATCTGGTTGAGGTTATTTCATTTGGAAACCTTCCT...AGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGACATCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR TCA 90 bp AGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCTGCCGTTTTAAACCTTCATAAACCAGTGGTAGAATGTTaGCCTTTGACCCAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: RKKASSVSLKAAVLNLHKPVVEC*PLTQSA
Trigger: AGCACTCTGGGTCAAAGGTCAACATTCTACCACTGG...TTTATGAAGGTTTAAAACGGCAGCTTTTAAAGAAACGGATGAAGCTTTCTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR GCA 90 bp TCCAAGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCTGCCGTTTTAAACCTTCAGCAATGAGGGAAATGTaGCATTCCATAAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: SKEESFIRFFKSCRFKPSAMREM*HSIKPR
Trigger: TCTCGGCTTTATGGAATGGCACATTTCCCTCATTGC...TGAAGGTTTAAAACGGCAGCTTTTAAAGAAACGGATGAAGCTTTCTTCCTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR GCA 90 bp GAGTGCTTTGAGGCTATTAAAAGTGTAGAAATAGACAAAATTGGAGCAGCAGAGGCAATGAGGGAAATGTaGCATTCCATAAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: ECFEAIKSVEIDKIGAAEAMREM*HSIKPR
Trigger: TCTCGGCTTTATGGAATGGCACATTTCCCTCATTGC...CTCTGCTGCTCCAATTTTGTCTATTTCTACACTTTTAATAGCCTCAAAGCACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427084.5
ENST00000458600.5
CDS-3UTR GCA 90 bp CCAGGGCTTGTAAGAATGGACACAAAACTTCAAGTCTTTCGTAATGAAAGGATTGCAATGAGGGAAATGTaGCATTCCATAAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: PGLVRMDTKLQVFRNERIAMREM*HSIKPR
Trigger: TCTCGGCTTTATGGAATGGCACATTTCCCTCATTGC...AATCCTTTCATTACGAAAGACTTGAAGTTTTGTGTCCATTCTTACAAGCCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR GCA 90 bp AACTACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGTGCTTTACCTTTGACCCAGAGTaGTTTGAGGCTATTAAAAGT +
Preference number: 4 (lower is better)
Translates to: NYQIFSSGRMLTFDPECFTFDPE*FEAIKS
Trigger: ACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGT...AAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR GCA 90 bp ATCTTGATGTCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTACCTTTGACCCAGAGTaGTTTGAGGCTATTAAAAGT +
Preference number: 4 (lower is better)
Translates to: ILMSIIETNHFFSWVRGPTFDPE*FEAIKS
Trigger: ACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGT...AGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGACATCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435456.7
CDS-3UTR GCA 90 bp GAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTCTGGGTTTAGTCCACATTAACCACTCCTaGAACAAACCCAACTACCAG +
Preference number: 4 (lower is better)
Translates to: EDREYSEDFPMFCFLGLVHINHS*NKPNYQ
Trigger: CTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTG...GACTAAACCCAGAAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420970.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CCA 90 bp CAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGTGCTTTGAGGCTACCTTTGTAGTTTGTTaGTACAATGTCTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: QIFSSGRMLTFDPECFEATFVVC*YNVFIP
Trigger: AGGAATGAAGACATTGTACCAACAAACTACAAAGGT...AGCCTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CCA 90 bp AGAATGTTGACCTTTGACCCAGAGTGCTTTGAGGCTATTAAAAGTGTAGAAATAGAGACTGGAAATCACTaGAAACCACCCTCGATATGG +
Preference number: 4 (lower is better)
Translates to: RMLTFDPECFEAIKSVEIETGNH*KPPSIW
Trigger: CCATATCGAGGGTGGTTTCCAGTGATTTCCAGTCTC...TATTTCTACACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGTCAACATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CCA 90 bp TTATTCCAAAACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACGAGACTGGAAATCACTaGAAACCACCCTCGATATGG +
Preference number: 4 (lower is better)
Translates to: LFQNVLLVGEEDREYSEDETGNH*KPPSIW
Trigger: CCATATCGAGGGTGGTTTCCAGTGATTTCCAGTCTC...GTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTTGGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420970.5
ENST00000447566.5
CDS-3UTR CCA 90 bp ATTCCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGAAATAGACAAAATTaGAGCAGCAGAGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: IPKFCSLKLQSGVYHPEWRNRQN*SSRDWK
Trigger: TTTCCAGTCTCTGCTGCTCCAATTTTGTCTATTTCT...CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000412879.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR TCA 90 bp GAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTCTGGGTTTAGTCCTTTTCTCATCAACCTaGAGTCGAAGTCTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: EDREYSEDFPMFCFLGLVLFSST*SRSLAV
Trigger: TACAGCTAGACTTCGACTTCAGGTTGATGAGAAAAG...GACTAAACCCAGAAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000420970.5
CDS-3UTR TCA 90 bp CCAGGGCTTGTAAGAATGGACACAAAACTTCAAGTCTTTCGTAATGAAAGGATTCTTTTCTCATCAACCTaGAGTCGAAGTCTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: PGLVRMDTKLQVFRNERILFSST*SRSLAV
Trigger: TACAGCTAGACTTCGACTTCAGGTTGATGAGAAAAG...AATCCTTTCATTACGAAAGACTTGAAGTTTTGTGTCCATTCTTACAAGCCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000435456.7
CDS-3UTR GCA 90 bp GATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTCTGGGTTTAGTCTATGCAATGAGGGAAATGTaGCATTCCATAAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: DREYSEDFPMFCFLGLVYAMREM*HSIKPR
Trigger: TCTCGGCTTTATGGAATGGCACATTTCCCTCATTGC...ATAGACTAAACCCAGAAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR GCA 90 bp ACACATCCAAGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCTGCCGTTTTAAACAATCGCTTTGGCTACTaGACCAATGATGAACACATC +
Preference number: 4 (lower is better)
Translates to: THPRKKASSVSLKAAVLNNRFGY*TNDEHI
Trigger: GATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATT...GTTTAAAACGGCAGCTTTTAAAGAAACGGATGAAGCTTTCTTCCTTGGATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR GCA 90 bp GGTAGAATGTTGACCTTTGACCCAGAGTGCTTTGAGGCTATTAAAAGTGTAGAAACCTTTGACCCAGAGTaGTTTGAGGCTATTAAAAGT +
Preference number: 4 (lower is better)
Translates to: GRMLTFDPECFEAIKSVETFDPE*FEAIKS
Trigger: ACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGT...TTCTACACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR GCA 90 bp AACACATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTATTACTCATCTCTTCATaGAAGTTCTGGCATAGGTTT +
Preference number: 4 (lower is better)
Translates to: NTLTTPATNPTTRSFPVVLLISS*KFWHRF
Trigger: AAACCTATGCCAGAACTTGCATGAAGAGATGAGTAA...TACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434193.5
ENST00000443810.5
CDS-3UTR GCA 90 bp TTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTTTACTCATCTCTTCATaGAAGTTCTGGCATAGGTTT +
Preference number: 4 (lower is better)
Translates to: LTTPATNPTTRSFPVVECLLISS*KFWHRF
Trigger: AAACCTATGCCAGAACTTGCATGAAGAGATGAGTAA...ACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434193.5
ENST00000443810.5
CDS-3UTR CCA 90 bp CACATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAACCTTTGTAGTTTGTTaGTACAATGTCTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: HINHSCNKPNYQIFSSGRTFVVC*YNVFIP
Trigger: AGGAATGAAGACATTGTACCAACAAACTACAAAGGT...TCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CCA 90 bp ATTCCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGACCTTTGTAGTTTGTTaGTACAATGTCTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: IPKFCSLKLQSGVYHPEWTFVVC*YNVFIP
Trigger: AGGAATGAAGACATTGTACCAACAAACTACAAAGGT...CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CCA 90 bp TACACCAAGTTTATAAAGGGAGATAATATCCAGACCTCAACAAGATATCTGCTCCTTCGGAATTTTTCATaGGAAGGCGTCTCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: YTKFIKGDNIQTSTRYLLLRNFS*EGVSVL
Trigger: CAACACTGAGACGCCTTCCCATGAAAAATTCCGAAG...GAGCAGATATCTTGTTGAGGTCTGGATATTATCTCCCTTTATAAACTTGGTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp TACACCAAGTTTATAAAGGGAGATAATATCCAGACCTCAACAAGATATCTGCTCATAAAGTCATGCCCGTaGCACAGCCCTAATGTTAGT +
Preference number: 4 (lower is better)
Translates to: YTKFIKGDNIQTSTRYLLIKSCP*HSPNVS
Trigger: ACTAACATTAGGGCTGTGCCACGGGCATGACTTTAT...GAGCAGATATCTTGTTGAGGTCTGGATATTATCTCCCTTTATAAACTTGGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp TGCCAGGAGTCCTTCTTCTTTAATGATCTCCAGGAGCACCATGTGTGTAGTTTTTCTTCATGCAAGTTCTaGCATAGGTTTACAATTTCA +
Preference number: 4 (lower is better)
Translates to: CQESFFFNDLQEHHVCSFSSCKF*HRFTIS
Trigger: TGAAATTGTAAACCTATGCCAGAACTTGCATGAAGA...AAAACTACACACATGGTGCTCCTGGAGATCATTAAAGAAGAAGGACTCCTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CCA 90 bp AAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTCTTCATGCAAGTTCTaGCATAGGTTTACAATTTCA +
Preference number: 4 (lower is better)
Translates to: KFCSLKLQSGVYHPEWSCSSCKF*HRFTIS
Trigger: TGAAATTGTAAACCTATGCCAGAACTTGCATGAAGA...ACAACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434193.5
ENST00000443810.5
ENST00000458600.5
CDS-3UTR TCA 90 bp ACACATCCAAGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCTGCCGTTTTAAACTTCCTTCATCGCGAATaGTCTGATGAAAAGCATCAA +
Preference number: 4 (lower is better)
Translates to: THPRKKASSVSLKAAVLNFLHRE*SDEKHQ
Trigger: TTGATGCTTTTCATCAGATCATTCGCGATGAAGGAA...GTTTAAAACGGCAGCTTTTAAAGAAACGGATGAAGCTTTCTTCCTTGGATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR GCA 90 bp AGAATGTTGACCTTTGACCCAGAGTGCTTTGAGGCTATTAAAAGTGTAGAAATAAATCGCTTTGGCTACTaGACCAATGATGAACACATC +
Preference number: 4 (lower is better)
Translates to: RMLTFDPECFEAIKSVEINRFGY*TNDEHI
Trigger: GATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATT...TATTTCTACACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGTCAACATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427084.5
CDS-3UTR GCA 90 bp CATCCAAGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCTGCCGTTTTAAACCTTACCTTTGACCCAGAGTaGTTTGAGGCTATTAAAAGT +
Preference number: 4 (lower is better)
Translates to: HPRKKASSVSLKAAVLNLTFDPE*FEAIKS
Trigger: ACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGT...AAGGTTTAAAACGGCAGCTTTTAAAGAAACGGATGAAGCTTTCTTCCTTGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CCA 90 bp ACAAAAATAAAGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAACCTTTGTAGTTTGTTaGTACAATGTCTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: TKIKSCPWHSPNVSFREETFVVC*YNVFIP
Trigger: AGGAATGAAGACATTGTACCAACAAACTACAAAGGT...TTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACTTTATTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR GCA 90 bp CTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTTTTTTCCCATCTGGTTaGAAACTCAACGTAATACCT +
Preference number: 4 (lower is better)
Translates to: LVGEEDREYSEDFPMFCFFFPSG*KLNVIP
Trigger: AGGTATTACGTTGAGTTTGCAACCAGATGGGAAAAA...AAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAG
38% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263255.10
CDS-3UTR GCA 90 bp TATTCCAAAACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTACCTTTGACCCAGAGTaGTTTGAGGCTATTAAAAGT +
Preference number: 4 (lower is better)
Translates to: YSKTSYSLVKKIENIPKTTFDPE*FEAIKS
Trigger: ACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGT...AGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTTGGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420970.5
ENST00000447566.5
CDS-3UTR CCA 90 bp CCAGGGCTTGTAAGAATGGACACAAAACTTCAAGTCTTTCGTAATGAAAGGATTGTGATTTTTCCCATCTaGTTGCAAACTCAACGTAAT +
Preference number: 4 (lower is better)
Translates to: PGLVRMDTKLQVFRNERIVIFPI*LQTQRN
Trigger: ATTACGTTGAGTTTGCAACCAGATGGGAAAAATCAC...AATCCTTTCATTACGAAAGACTTGAAGTTTTGTGTCCATTCTTACAAGCCCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp TCCTTCTTCTTTAATGATCTCCAGGAGCACCATGTGTGTAGTTTTGGATTTTCTAGAAATAGACAAAATTaGAGCAGCAGAGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: SFFFNDLQEHHVCSFGFSRNRQN*SSRDWK
Trigger: TTTCCAGTCTCTGCTGCTCCAATTTTGTCTATTTCT...AGAAAATCCAAAACTACACACATGGTGCTCCTGGAGATCATTAAAGAAGAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CCA 90 bp AGTCCTTCTTCTTTAATGATCTCCAGGAGCACCATGTGTGTAGTTTTGGATTTTAGAAATAGACAAAATTaGAGCAGCAGAGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: SPSSLMISRSTMCVVLDFRNRQN*SSRDWK
Trigger: TTTCCAGTCTCTGCTGCTCCAATTTTGTCTATTTCT...AAAATCCAAAACTACACACATGGTGCTCCTGGAGATCATTAAAGAAGAAGGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR TCA 90 bp TACACCAAGTTTATAAAGGGAGATAATATCCAGACCTCAACAAGATATCTGCTCGGAAAACACCAACACTaGGACATACAAAAGTATTTG +
Preference number: 4 (lower is better)
Translates to: YTKFIKGDNIQTSTRYLLGKHQH*DIQKYL
Trigger: CAAATACTTTTGTATGTCTCAGTGTTGGTGTTTTCC...GAGCAGATATCTTGTTGAGGTCTGGATATTATCTCCCTTTATAAACTTGGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR GCA 90 bp CCAGGGCTTGTAAGAATGGACACAAAACTTCAAGTCTTTCGTAATGAAAGGATTAGAATTGTAACAATGTaGCTGACACATGGTATATAC +
Preference number: 4 (lower is better)
Translates to: PGLVRMDTKLQVFRNERIRIVTM*LTHGIY
Trigger: GTATATACCATGTGTCAGGCACATTGTTACAATTCT...AATCCTTTCATTACGAAAGACTTGAAGTTTTGTGTCCATTCTTACAAGCCCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402844.7
CDS-3UTR GCA 90 bp CCAGGGCTTGTAAGAATGGACACAAAACTTCAAGTCTTTCGTAATGAAAGGATTTCAGCTTTTAAGCTTTaGTGCTTTAAAGCTACATAC +
Preference number: 4 (lower is better)
Translates to: PGLVRMDTKLQVFRNERISAFKL*CFKATY
Trigger: GTATGTAGCTTTAAAGCAGCAAAGCTTAAAAGCTGA...AATCCTTTCATTACGAAAGACTTGAAGTTTTGTGTCCATTCTTACAAGCCCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402844.7
CDS-3UTR CCA 90 bp CCAGGGCTTGTAAGAATGGACACAAAACTTCAAGTCTTTCGTAATGAAAGGATTACCTTTGTAGTTTGTTaGTACAATGTCTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: PGLVRMDTKLQVFRNERITFVVC*YNVFIP
Trigger: AGGAATGAAGACATTGTACCAACAAACTACAAAGGT...AATCCTTTCATTACGAAAGACTTGAAGTTTTGTGTCCATTCTTACAAGCCCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CCA 90 bp TACACCAAGTTTATAAAGGGAGATAATATCCAGACCTCAACAAGATATCTGCTCACCTTTGTAGTTTGTTaGTACAATGTCTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: YTKFIKGDNIQTSTRYLLTFVVC*YNVFIP
Trigger: AGGAATGAAGACATTGTACCAACAAACTACAAAGGT...GAGCAGATATCTTGTTGAGGTCTGGATATTATCTCCCTTTATAAACTTGGTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS TCA 90 bp GCCGCAGCCAGTGGAGTTAGGAAAGGAGCACCGGAGCTCAGGGTGTaGGAGTCGCAATCCCCGCCCTCTCAAACCCGCCCGCCTGCCCTA +
Preference number: 5 (lower is better)
Translates to: AAASGVRKGAPELRV*ESQSPPSQTRPPAL
Trigger: TAGGGCAGGCGGGCGGGTTTGAGAGGGCGGGGATTGCGACTCTCACACCCTGAGCTCCGGTGCTCCTTTCCTAACTCCACTGGCTGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412879.5
ENST00000458600.5
ENST00000544408.5
CDS GCA 90 bp CACGGCGTGGACCAGGCTTTCGTAGGACAGCACGGAAGCCATTGGTaGGGCTCCTCGAAGACCCAGCCACACTTTTCCCACAGATGCCGC +
Preference number: 5 (lower is better)
Translates to: HGVDQAFVGQHGSHW*GSSKTQPHFSHRCR
Trigger: GCGGCATCTGTGGGAAAAGTGTGGCTGGGTCTTCGAGGAGCCGCACCAATGGCTTCCGTGCTGTCCTACGAAAGCCTGGTCCACGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000420970.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000434185.1
ENST00000434193.5
ENST00000435456.7
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
ENST00000491545.5
ENST00000544408.5
CDS CCA 90 bp GGCCACGGCGTGGACCAGGCTTTCGTAGGACAGCACGGAAGCCATTaGTGCGGCTCCTCGAAGACCCAGCCACACTTTTCCCACAGATGC +
Preference number: 5 (lower is better)
Translates to: GHGVDQAFVGQHGSH*CGSSKTQPHFSHRC
Trigger: GCATCTGTGGGAAAAGTGTGGCTGGGTCTTCGAGGAGCCGCACCAATGGCTTCCGTGCTGTCCTACGAAAGCCTGGTCCACGCCGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000420970.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000434185.1
ENST00000434193.5
ENST00000435456.7
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
ENST00000491545.5
ENST00000544408.5
CDS-3UTR CAA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCGAAGGCGTCTCAGTGTaGGTGTGCACGCTTCAGCCC +
Preference number: 5 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPEGVSV*VCTLQP
Trigger: GGGCTGAAGCGTGCACACCAACACTGAGACGCCTTC...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR CAA 90 bp CAGGGGTCCTATGGTCTCCTGAACTTTAATGTGGCTGTGAATCACCTGGGAATGGAAGGCGTCTCAGTGTaGGTGTGCACGCTTCAGCCC +
Preference number: 5 (lower is better)
Translates to: QGSYGLLNFNVAVNHLGMEGVSV*VCTLQP
Trigger: GGGCTGAAGCGTGCACACCAACACTGAGACGCCTTC...CATTCCCAGGTGATTCACAGCCACATTAAAGTTCAGGAGACCATAGGACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp CTCTTGAGCATCTTCGGAATTTTTCATGGGAAGGCGTCTCAGTGTTGGTGTGCAACAGCACGGAAGCCATaGGTGCGGCTCCTCGAAGAC +
Preference number: 5 (lower is better)
Translates to: LLSIFGIFHGKASQCWCATARKP*VRLLED
Trigger: GTCTTCGAGGAGCCGCACCAATGGCTTCCGTGCTGT...TGCACACCAACACTGAGACGCCTTCCCATGAAAAATTCCGAAGATGCTCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR CAA 90 bp GTCACCGTGGTGGCAATCGCTTTGGCTACTGCACCAATGATGAACACATCCAAGGCCCAAACCTCAGAATaGACTGTACCGTCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: VTVVAIALATAPMMNTSKAQTSE*TVPSAG
Trigger: CCCTGCAGACGGTACAGTCAATTCTGAGGTTTGGGC...CTTGGATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CAA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCGCCCAAACCTCAGAATaGACTGTACCGTCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPAQTSE*TVPSAG
Trigger: CCCTGCAGACGGTACAGTCAATTCTGAGGTTTGGGC...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR CAA 90 bp CCTCTTGAGCATCTTCGGAATTTTTCATGGGAAGGCGTCTCAGTGTTGGTGTGCGCCCAAACCTCAGAATaGACTGTACCGTCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: PLEHLRNFSWEGVSVLVCAQTSE*TVPSAG
Trigger: CCCTGCAGACGGTACAGTCAATTCTGAGGTTTGGGC...GCACACCAACACTGAGACGCCTTCCCATGAAAAATTCCGAAGATGCTCAAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR CAA 90 bp GGTGACAACAGGTCCAGTTGGCCATACTCCCTGTGCACCCTTGGATGCTTTTCAACTCCCTGTGCACCCTaGGATGCTTTTCAAGCCAAT +
Preference number: 5 (lower is better)
Translates to: GDNRSSWPYSLCTLGCFSTPCAP*DAFQAN
Trigger: ATTGGCTTGAAAAGCATCCAAGGGTGCACAGGGAGT...TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR CAA 90 bp CAGGGGATAGGTCACCGTGGTGGCAATCGCTTTGGCTACTGCACCAATGATGAATCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: QGIGHRGGNRFGYCTNDESSGRM*TFDPEC
Trigger: GCACTCTGGGTCAAAGGTCAACATTCTACCACTGGA...TTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTGACCTATCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CAA 90 bp GGTGACAACAGGTCCAGTTGGCCATACTCCCTGTGCACCCTTGGATGCTTTTCATCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: GDNRSSWPYSLCTLGCFSSSGRM*TFDPEC
Trigger: GCACTCTGGGTCAAAGGTCAACATTCTACCACTGGA...TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435456.7
ENST00000447566.5
CDS-3UTR CAA 90 bp ATTCCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGACAGCACGGAAGCCATaGGTGCGGCTCCTCGAAGAC +
Preference number: 5 (lower is better)
Translates to: IPKFCSLKLQSGVYHPEWTARKP*VRLLED
Trigger: GTCTTCGAGGAGCCGCACCAATGGCTTCCGTGCTGT...CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CAA 90 bp GGTGACAACAGGTCCAGTTGGCCATACTCCCTGTGCACCCTTGGATGCTTTTCAAACTGGATGGCAGGATaGAAGACCAACAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: GDNRSSWPYSLCTLGCFSNWMAG*KTNSNE
Trigger: CTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGTT...TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR CAA 90 bp TCTATGACGCCCAAACTGTTCATTCTCTCTTCCACTAGCTCCATAAGGGCAGGGGTGGTGGCAATCGCTTaGGCTACTGCACCAATGATG +
Preference number: 5 (lower is better)
Translates to: SMTPKLFILSSTSSIRAGVVAIA*ATAPMM
Trigger: CATCATTGGTGCAGTAGCCAAAGCGATTGCCACCAC...CCCTGCCCTTATGGAGCTAGTGGAAGAGAGAATGAACAGTTTGGGCGTCATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420970.5
CDS-3UTR CAA 90 bp AGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACAGCCCAAACCTCAGAATaGACTGTACCGTCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: SHARGTALMLVLGRKTPTAQTSE*TVPSAG
Trigger: CCCTGCAGACGGTACAGTCAATTCTGAGGTTTGGGC...TGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp TACCGTCTGATGGACCACACTGAGCAACAGGACTCTAAGGAAGGTTTCCAAATGGCCCAAACCTCAGAATaGACTGTACCGTCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: YRLMDHTEQQDSKEGFQMAQTSE*TVPSAG
Trigger: CCCTGCAGACGGTACAGTCAATTCTGAGGTTTGGGC...CATTTGGAAACCTTCCTTAGAGTCCTGTTGCTCAGTGTGGTCCATCAGACGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCACTCCCTGTGCACCCTaGGATGCTTTTCAAGCCAAT +
Preference number: 5 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPTPCAP*DAFQAN
Trigger: ATTGGCTTGAAAAGCATCCAAGGGTGCACAGGGAGT...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR CAA 90 bp AACACATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAACAGCACGGAAGCCATaGGTGCGGCTCCTCGAAGAC +
Preference number: 5 (lower is better)
Translates to: NTLTTPATNPTTRSFPVVTARKP*VRLLED
Trigger: GTCTTCGAGGAGCCGCACCAATGGCTTCCGTGCTGT...TACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CAA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCAACTGGATGGCAGGATaGAAGACCAACAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPNWMAG*KTNSNE
Trigger: CTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGTT...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR CAA 90 bp TACCGTCTGATGGACCACACTGAGCAACAGGACTCTAAGGAAGGTTTCCAAATGGTGGTGGCAATCGCTTaGGCTACTGCACCAATGATG +
Preference number: 5 (lower is better)
Translates to: YRLMDHTEQQDSKEGFQMVVAIA*ATAPMM
Trigger: CATCATTGGTGCAGTAGCCAAAGCGATTGCCACCAC...CATTTGGAAACCTTCCTTAGAGTCCTGTTGCTCAGTGTGGTCCATCAGACGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp CCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTGAGACAGTGGTGGCAATCGCTTaGGCTACTGCACCAATGATG +
Preference number: 5 (lower is better)
Translates to: PWHSPNVSFREENTNTETVVAIA*ATAPMM
Trigger: CATCATTGGTGCAGTAGCCAAAGCGATTGCCACCAC...TGTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp ACAAAAATAAAGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAGAAGGCGTCTCAGTGTaGGTGTGCACGCTTCAGCCC +
Preference number: 5 (lower is better)
Translates to: TKIKSCPWHSPNVSFREEEGVSV*VCTLQP
Trigger: GGGCTGAAGCGTGCACACCAACACTGAGACGCCTTC...TTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACTTTATTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp ATCTTGATGTCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTGAAGGCGTCTCAGTGTaGGTGTGCACGCTTCAGCCC +
Preference number: 5 (lower is better)
Translates to: ILMSIIETNHFFSWVRGPEGVSV*VCTLQP
Trigger: GGGCTGAAGCGTGCACACCAACACTGAGACGCCTTC...AGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGACATCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp ATTCCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGCTTGAGGCCAGGGGTTaGAAACCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: IPKFCSLKLQSGVYHPEWLEARG*KPAWAT
Trigger: TGTTGCCCAGGCTGGTTTCAAACCCCTGGCCTCAAG...CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426396.5
CDS CCA 90 bp GCCACTACTGTTAGAAGCGATTTGGAAGCTTTGCTGATAGCAAAATaGCTGGCGGCAGCAGCTCTCCAGATGAAGAGCAATAAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: ATTVRSDLEALLIAK*LAAAALQMKSNKFP
Trigger: AGGGAACTTATTGCTCTTCATCTGGAGAGCTGCTGCCGCCAGCCATTTTGCTATCAGCAAAGCTTCCAAATCGCTTCTAACAGTAGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402844.7
CDS-3UTR CAA 90 bp ACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTACAGCACGGAAGCCATaGGTGCGGCTCCTCGAAGAC +
Preference number: 5 (lower is better)
Translates to: TSYSLVKKIENIPKTSQCTARKP*VRLLED
Trigger: GTCTTCGAGGAGCCGCACCAATGGCTTCCGTGCTGT...ACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000447566.5
CDS-3UTR CAA 90 bp GGTAGAATGTTGACCTTTGACCCAGAGTGCTTTGAGGCTATTAAAAGTGTAGAAACAGCACGGAAGCCATaGGTGCGGCTCCTCGAAGAC +
Preference number: 5 (lower is better)
Translates to: GRMLTFDPECFEAIKSVETARKP*VRLLED
Trigger: GTCTTCGAGGAGCCGCACCAATGGCTTCCGTGCTGT...TTCTACACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000434193.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CAA 90 bp CAGGGGATAGGTCACCGTGGTGGCAATCGCTTTGGCTACTGCACCAATGATGAACCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: QGIGHRGGNRFGYCTNDEPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...TTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTGACCTATCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CAA 90 bp GGTGACAACAGGTCCAGTTGGCCATACTCCCTGTGCACCCTTGGATGCTTTTCACCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: GDNRSSWPYSLCTLGCFSPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR CAA 90 bp AACAGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCATCGCGAGTGGTGGCAATCGCTTaGGCTACTGCACCAATGATG +
Preference number: 5 (lower is better)
Translates to: NSNEGNVPFHKAEIPSSRVVAIA*ATAPMM
Trigger: CATCATTGGTGCAGTAGCCAAAGCGATTGCCACCAC...TCGCGATGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CAA 90 bp GAGCCAGAGTCAAGGGAGAATCACTTCTCTTCACTCAGGAGGAAACCTCCCTCTGAGGAAACCTCCCTCTaGAGCATCTTCGGAATTTTT +
Preference number: 5 (lower is better)
Translates to: EPESRENHFSSLRRKPPSEETSL*SIFGIF
Trigger: AAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCTC...AGAGGGAGGTTTCCTCCTGAGTGAAGAGAAGTGATTCTCCCTTGACTCTGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR CAA 90 bp ACCACCCAGAGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAACCCATCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: TTQSGVVSNTLTTPATNPSSGRM*TFDPEC
Trigger: GCACTCTGGGTCAAAGGTCAACATTCTACCACTGGA...TGGGTTTGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACTCTGGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CAA 90 bp TTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTAGCATCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: LLLEASVWCLPPRVELLASSGRM*TFDPEC
Trigger: GCACTCTGGGTCAAAGGTCAACATTCTACCACTGGA...TGCTAACAACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CAA 90 bp AGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACAAACTGGATGGCAGGATaGAAGACCAACAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: SHARGTALMLVLGRKTPTNWMAG*KTNSNE
Trigger: CTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGTT...TGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp CCAACAGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCATCGCAACTGGATGGCAGGATaGAAGACCAACAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: PTAMREMCHSIKPRFLHRNWMAG*KTNSNE
Trigger: CTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGTT...GCGATGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCTGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CAA 90 bp AAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGGTGGTGGCAATCGCTTaGGCTACTGCACCAATGATG +
Preference number: 5 (lower is better)
Translates to: KPNYQIFSSGRMLTFDPEVVAIA*ATAPMM
Trigger: CATCATTGGTGCAGTAGCCAAAGCGATTGCCACCAC...CTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CAA 90 bp CATCCAAGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCTGCCGTTTTAAACCTTGAAGGCGTCTCAGTGTaGGTGTGCACGCTTCAGCCC +
Preference number: 5 (lower is better)
Translates to: HPRKKASSVSLKAAVLNLEGVSV*VCTLQP
Trigger: GGGCTGAAGCGTGCACACCAACACTGAGACGCCTTC...AAGGTTTAAAACGGCAGCTTTTAAAGAAACGGATGAAGCTTTCTTCCTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR CAA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCACTGTTAGAAGCGATTaGGAAGCTTTGCTGATAGCA +
Preference number: 5 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPTVRSD*EALLIA
Trigger: TGCTATCAGCAAAGCTTCCAAATCGCTTCTAACAGT...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402844.7
CDS-3UTR CAA 90 bp CACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTTGACCTCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: HSCNKPNYQIFSSGRMLTSSGRM*TFDPEC
Trigger: GCACTCTGGGTCAAAGGTCAACATTCTACCACTGGA...GGTCAACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CAA 90 bp CAGGGGTCCTATGGTCTCCTGAACTTTAATGTGGCTGTGAATCACCTGGGAATGCCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: QGSYGLLNFNVAVNHLGMPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...CATTCCCAGGTGATTCACAGCCACATTAAAGTTCAGGAGACCATAGGACCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp GGTGACAACAGGTCCAGTTGGCCATACTCCCTGTGCACCCTTGGATGCTTTTCATACCTTTGTAGTTTGTaGGTACAATGTCTTCATTCC +
Preference number: 5 (lower is better)
Translates to: GDNRSSWPYSLCTLGCFSYLCSL*VQCLHS
Trigger: GGAATGAAGACATTGTACCAACAAACTACAAAGGTA...TGAAAAGCATCCAAGGGTGCACAGGGAGTATGGCCAACTGGACCTGTTGTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR CAA 90 bp ACAAAAATAAAGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAGTGGTGGCAATCGCTTaGGCTACTGCACCAATGATG +
Preference number: 5 (lower is better)
Translates to: TKIKSCPWHSPNVSFREEVVAIA*ATAPMM
Trigger: CATCATTGGTGCAGTAGCCAAAGCGATTGCCACCAC...TTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACTTTATTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp GCACCAATGATGAACACATCCAAGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCGCCCAAACCTCAGAATaGACTGTACCGTCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: APMMNTSKEESFIRFFKSAQTSE*TVPSAG
Trigger: CCCTGCAGACGGTACAGTCAATTCTGAGGTTTGGGC...GCTTTTAAAGAAACGGATGAAGCTTTCTTCCTTGGATGTGTTCATCATTGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CAA 90 bp TACCGTCTGATGGACCACACTGAGCAACAGGACTCTAAGGAAGGTTTCCAAATGGAGGAAACCTCCCTCTaGAGCATCTTCGGAATTTTT +
Preference number: 5 (lower is better)
Translates to: YRLMDHTEQQDSKEGFQMEETSL*SIFGIF
Trigger: AAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCTC...CATTTGGAAACCTTCCTTAGAGTCCTGTTGCTCAGTGTGGTCCATCAGACGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp CCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACACTGAGACAGAGGAAACCTCCCTCTaGAGCATCTTCGGAATTTTT +
Preference number: 5 (lower is better)
Translates to: PWHSPNVSFREENTNTETEETSL*SIFGIF
Trigger: AAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCTC...TGTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp TTCTGTTTTCTGGGTTTAGTCTATGACGCCCAAACCTCAGAATTGACTGTACCGACTCCCTGTGCACCCTaGGATGCTTTTCAAGCCAAT +
Preference number: 5 (lower is better)
Translates to: FCFLGLVYDAQTSELTVPTPCAP*DAFQAN
Trigger: ATTGGCTTGAAAAGCATCCAAGGGTGCACAGGGAGT...CGGTACAGTCAATTCTGAGGTTTGGGCGTCATAGACTAAACCCAGAAAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR CAA 90 bp ATTCCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGTCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: IPKFCSLKLQSGVYHPEWSSGRM*TFDPEC
Trigger: GCACTCTGGGTCAAAGGTCAACATTCTACCACTGGA...CCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CAA 90 bp TACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGTGCTTTGAGTCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: YQIFSSGRMLTFDPECFESSGRM*TFDPEC
Trigger: GCACTCTGGGTCAAAGGTCAACATTCTACCACTGGA...CTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CAA 90 bp CCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTAATCCTAGCACTTaGGAAGGTCGAGGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: PKFCSLKLQSGVYHPEWSCNPST*EGRGRR
Trigger: TCTTCTGCCTCGACCTTCCAAAGTGCTAGGATTACA...ACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426396.5
CDS-3UTR CAA 90 bp TGGTGCCAGGAGTCCTTCTTCTTTAATGATCTCCAGGAGCACCATGTGTGTAGTCCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: WCQESFFFNDLQEHHVCSPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...ACTACACACATGGTGCTCCTGGAGATCATTAAAGAAGAAGGACTCCTGGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434193.5
ENST00000458600.5
CDS-3UTR CAA 90 bp TACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGTGCTTTGAGAACTGGATGGCAGGATaGAAGACCAACAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: YQIFSSGRMLTFDPECFENWMAG*KTNSNE
Trigger: CTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGTT...CTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CAA 90 bp AGCCGAGATTCCTTCATCGCGAATGATCTGATGAAAAGCATCAATGATACCTTTGTGGTGGCAATCGCTTaGGCTACTGCACCAATGATG +
Preference number: 5 (lower is better)
Translates to: SRDSFIANDLMKSINDTFVVAIA*ATAPMM
Trigger: CATCATTGGTGCAGTAGCCAAAGCGATTGCCACCAC...AAAGGTATCATTGATGCTTTTCATCAGATCATTCGCGATGAAGGAATCTCGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CAA 90 bp CACCGTGGTGGCAATCGCTTTGGCTACTGCACCAATGATGAACACATCCAAGGAAAAACGTCTTACTCGTaGGTGAAGAAGATAGAGAAT +
Preference number: 5 (lower is better)
Translates to: HRGGNRFGYCTNDEHIQGKTSYS*VKKIEN
Trigger: ATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTT...TCCTTGGATGTGTTCATCATTGGTGCAGTAGCCAAAGCGATTGCCACCACGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263255.10
ENST00000447566.5
CDS-3UTR CAA 90 bp CAACCAGCCAGCATGACAATTAAGGTGACAACAGGTCCAGTTGGCCATACTCCCAAAACGTCTTACTCGTaGGTGAAGAAGATAGAGAAT +
Preference number: 5 (lower is better)
Translates to: QPASMTIKVTTGPVGHTPKTSYS*VKKIEN
Trigger: ATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTT...GGGAGTATGGCCAACTGGACCTGTTGTCACCTTAATTGTCATGCTGGCTGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000447566.5
ENST00000544408.5
CDS-3UTR CAA 90 bp CAGAGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAACCCAACTACCGAGGAAACCTCCCTCTaGAGCATCTTCGGAATTTTT +
Preference number: 5 (lower is better)
Translates to: QSGVVSNTLTTPATNPTTEETSL*SIFGIF
Trigger: AAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCTC...GGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447566.5
CDS-3UTR CAA 90 bp ACAAAAATAAAGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAACTCCCTGTGCACCCTaGGATGCTTTTCAAGCCAAT +
Preference number: 5 (lower is better)
Translates to: TKIKSCPWHSPNVSFREETPCAP*DAFQAN
Trigger: ATTGGCTTGAAAAGCATCCAAGGGTGCACAGGGAGT...TTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACTTTATTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp ATCTTGATGTCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTACTCCCTGTGCACCCTaGGATGCTTTTCAAGCCAAT +
Preference number: 5 (lower is better)
Translates to: ILMSIIETNHFFSWVRGPTPCAP*DAFQAN
Trigger: ATTGGCTTGAAAAGCATCCAAGGGTGCACAGGGAGT...AGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGACATCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp AACTACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGTGCTTTTCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: NYQIFSSGRMLTFDPECFSSGRM*TFDPEC
Trigger: GCACTCTGGGTCAAAGGTCAACATTCTACCACTGGA...AAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
CDS-3UTR CAA 90 bp CCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTCCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: PKFCSLKLQSGVYHPEWSPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...ACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CAA 90 bp GTGTTTACCACCCAGAGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACACCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: VFTTQSGVVSNTLTTPATPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...TGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACTCTGGGTGGTAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000434193.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CAA 90 bp GCCAGGAGTCCTTCTTCTTTAATGATCTCCAGGAGCACCATGTGTGTAGTTTTGCCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: ARSPSSLMISRSTMCVVLPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...CAAAACTACACACATGGTGCTCCTGGAGATCATTAAAGAAGAAGGACTCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434193.5
ENST00000458600.5
CDS-3UTR CAA 90 bp AACACATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAAACTGGATGGCAGGATaGAAGACCAACAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: NTLTTPATNPTTRSFPVVNWMAG*KTNSNE
Trigger: CTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGTT...TACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CAA 90 bp AAAACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAAGTGGTGGCAATCGCTTaGGCTACTGCACCAATGATG +
Preference number: 5 (lower is better)
Translates to: KTSYSLVKKIENIPKTSQVVAIA*ATAPMM
Trigger: CATCATTGGTGCAGTAGCCAAAGCGATTGCCACCAC...TTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000447566.5
CDS-3UTR CAA 90 bp AGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACAATTTTTCCCATCTGGTaGCAAACTCAACGTAATACC +
Preference number: 5 (lower is better)
Translates to: SHARGTALMLVLGRKTPTIFPIW*QTQRNT
Trigger: GGTATTACGTTGAGTTTGCAACCAGATGGGAAAAAT...TGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp AAGACCAACAGCAATGAGGGAAATGTGCCATTCCATAAAGCCGAGATTCCTTCACCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: KTNSNEGNVPFHKAEIPSPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...TGAAGGAATCTCGGCTTTATGGAATGGCACATTTCCCTCATTGCTGTTGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263255.10
ENST00000427084.5
ENST00000430221.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CAA 90 bp ACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTAACTGGATGGCAGGATaGAAGACCAACAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: TSYSLVKKIENIPKTSQCNWMAG*KTNSNE
Trigger: CTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGTT...ACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000447566.5
CDS-3UTR CAA 90 bp AGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAAAACACCAACAAAAACGTCTTACTCGTaGGTGAAGAAGATAGAGAAT +
Preference number: 5 (lower is better)
Translates to: SHARGTALMLVLGRKTPTKTSYS*VKKIEN
Trigger: ATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTT...TGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp ATCTTGATGTCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTGAGGAAACCTCCCTCTaGAGCATCTTCGGAATTTTT +
Preference number: 5 (lower is better)
Translates to: ILMSIIETNHFFSWVRGPEETSL*SIFGIF
Trigger: AAAAATTCCGAAGATGCTCAAGAGGGAGGTTTCCTC...AGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGACATCAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp TCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTATGGTCTCCATTTTTCCCATCTGGTaGCAAACTCAACGTAATACC +
Preference number: 5 (lower is better)
Translates to: SIIETNHFFSWVRGPMVSIFPIW*QTQRNT
Trigger: GGTATTACGTTGAGTTTGCAACCAGATGGGAAAAAT...GGAGACCATAGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp ACAAAAATAAAGTCATGCCCGTGGCACAGCCCTAATGTTAGTTTTAGGGAGGAACCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: TKIKSCPWHSPNVSFREEPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...TTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACTTTATTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000402844.7
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp ATCTTGATGTCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTCCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: ILMSIIETNHFFSWVRGPPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...AGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGACATCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp CCTAAATTTTGCTCCTTGAAGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTACCTTTGTAGTTTGTaGGTACAATGTCTTCATTCC +
Preference number: 5 (lower is better)
Translates to: PKFCSLKLQSGVYHPEWSYLCSL*VQCLHS
Trigger: GGAATGAAGACATTGTACCAACAAACTACAAAGGTA...ACTCCACTCTGGGTGGTAAACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CAA 90 bp AGCTTCAGTCTGGTGTTTACCACCCAGAGTGGAGTTGTTAGCAACACATTAACCTACCTTTGTAGTTTGTaGGTACAATGTCTTCATTCC +
Preference number: 5 (lower is better)
Translates to: SFSLVFTTQSGVVSNTLTYLCSL*VQCLHS
Trigger: GGAATGAAGACATTGTACCAACAAACTACAAAGGTA...GGTTAATGTGTTGCTAACAACTCCACTCTGGGTGGTAAACACCAGACTGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CAA 90 bp CAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGTGCTTTGAGGCTTACCTTTGTAGTTTGTaGGTACAATGTCTTCATTCC +
Preference number: 5 (lower is better)
Translates to: QIFSSGRMLTFDPECFEAYLCSL*VQCLHS
Trigger: GGAATGAAGACATTGTACCAACAAACTACAAAGGTA...AGCCTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CAA 90 bp AAAACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAAAACTGGATGGCAGGATaGAAGACCAACAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: KTSYSLVKKIENIPKTSQNWMAG*KTNSNE
Trigger: CTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGTT...TTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000447566.5
CDS-3UTR CAA 90 bp GACCCAGAGTGCTTTGAGGCTATTAAAAGTGTAGAAATAGACAAAATTGGAGCAAACTGGATGGCAGGATaGAAGACCAACAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: DPECFEAIKSVEIDKIGANWMAG*KTNSNE
Trigger: CTCATTGCTGTTGGTCTTCAATCCTGCCATCCAGTT...TGCTCCAATTTTGTCTATTTCTACACTTTTAATAGCCTCAAAGCACTCTGGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427084.5
ENST00000458600.5
CDS-3UTR CAA 90 bp TACACCAAGTTTATAAAGGGAGATAATATCCAGACCTCAACAAGATATCTGCTCTCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: YTKFIKGDNIQTSTRYLLSSGRM*TFDPEC
Trigger: GCACTCTGGGTCAAAGGTCAACATTCTACCACTGGA...GAGCAGATATCTTGTTGAGGTCTGGATATTATCTCCCTTTATAAACTTGGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435456.7
CDS-3UTR CAA 90 bp AGTGGAGTTGTTAGCAACACATTAACCACTCCTGCAACAAACCCAACTACCAGATACCTTTGTAGTTTGTaGGTACAATGTCTTCATTCC +
Preference number: 5 (lower is better)
Translates to: SGVVSNTLTTPATNPTTRYLCSL*VQCLHS
Trigger: GGAATGAAGACATTGTACCAACAAACTACAAAGGTA...TCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTTGCTAACAACTCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CAA 90 bp TACCAGATCTTTTCCAGTGGTAGAATGTTGACCTTTGACCCAGAGTGCTTTGAGAAAACGTCTTACTCGTaGGTGAAGAAGATAGAGAAT +
Preference number: 5 (lower is better)
Translates to: YQIFSSGRMLTFDPECFEKTSYS*VKKIEN
Trigger: ATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTT...CTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447566.5
CDS-3UTR CAA 90 bp CCAGGGCTTGTAAGAATGGACACAAAACTTCAAGTCTTTCGTAATGAAAGGATTAGCGATTTGGAAGCTTaGCTGATAGCAAAATGGCTG +
Preference number: 5 (lower is better)
Translates to: PGLVRMDTKLQVFRNERISDLEA*LIAKWL
Trigger: CAGCCATTTTGCTATCAGCAAAGCTTCCAAATCGCT...AATCCTTTCATTACGAAAGACTTGAAGTTTTGTGTCCATTCTTACAAGCCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402844.7
CDS-3UTR CAA 90 bp GAGTGCTTTGAGGCTATTAAAAGTGTAGAAATAGACAAAATTGGAGCAGCAGAGCCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: ECFEAIKSVEIDKIGAAEPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...CTCTGCTGCTCCAATTTTGTCTATTTCTACACTTTTAATAGCCTCAAAGCACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000434193.5
ENST00000458600.5
CDS-3UTR CAA 90 bp TTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTCTGGCCTAAATTTTGCTCCTaGAAGCTTCAGTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: LVKKIENIPKTSQCSVFWPKFCS*KLQSGV
Trigger: AACACCAGACTGAAGCTTCAAGGAGCAAAATTTAGG...CCAGAAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CAA 90 bp AACACATTAACCACTCCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTATACCTTTGTAGTTTGTaGGTACAATGTCTTCATTCC +
Preference number: 5 (lower is better)
Translates to: NTLTTPATNPTTRSFPVVYLCSL*VQCLHS
Trigger: GGAATGAAGACATTGTACCAACAAACTACAAAGGTA...TACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGGAGTGGTTAATGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000430221.5
ENST00000443810.5
ENST00000447566.5
ENST00000458600.5
CDS-3UTR CAA 90 bp ATCTTGATGTCTATAATCGAAACCAATCACTTCTTCTCATGGGTCAGGGGTCCTTACCTTTGTAGTTTGTaGGTACAATGTCTTCATTCC +
Preference number: 5 (lower is better)
Translates to: ILMSIIETNHFFSWVRGPYLCSL*VQCLHS
Trigger: GGAATGAAGACATTGTACCAACAAACTACAAAGGTA...AGGACCCCTGACCCATGAGAAGAAGTGATTGGTTTCGATTATAGACATCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp GGTAGAATGTTGACCTTTGACCCAGAGTGCTTTGAGGCTATTAAAAGTGTAGAATACCTTTGTAGTTTGTaGGTACAATGTCTTCATTCC +
Preference number: 5 (lower is better)
Translates to: GRMLTFDPECFEAIKSVEYLCSL*VQCLHS
Trigger: GGAATGAAGACATTGTACCAACAAACTACAAAGGTA...TTCTACACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412879.5
ENST00000427084.5
ENST00000458600.5
CDS-3UTR CAA 90 bp GAAGATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTCTGGGTTTAGTCTACCTTTGTAGTTTGTaGGTACAATGTCTTCATTCC +
Preference number: 5 (lower is better)
Translates to: EDREYSEDFPMFCFLGLVYLCSL*VQCLHS
Trigger: GGAATGAAGACATTGTACCAACAAACTACAAAGGTA...GACTAAACCCAGAAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000430221.5
ENST00000447566.5
CDS-3UTR CAA 90 bp AAAACGTCTTACTCGTTGGTGAAGAAGATAGAGAATATTCCGAAGACTTCCCAATACCTTTGTAGTTTGTaGGTACAATGTCTTCATTCC +
Preference number: 5 (lower is better)
Translates to: KTSYSLVKKIENIPKTSQYLCSL*VQCLHS
Trigger: GGAATGAAGACATTGTACCAACAAACTACAAAGGTA...TTGGGAAGTCTTCGGAATATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000447566.5
CDS-3UTR CAA 90 bp TCCTTCTTCTTTAATGATCTCCAGGAGCACCATGTGTGTAGTTTTGGATTTTCTTACCTTTGTAGTTTGTaGGTACAATGTCTTCATTCC +
Preference number: 5 (lower is better)
Translates to: SFFFNDLQEHHVCSFGFSYLCSL*VQCLHS
Trigger: GGAATGAAGACATTGTACCAACAAACTACAAAGGTA...AGAAAATCCAAAACTACACACATGGTGCTCCTGGAGATCATTAAAGAAGAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458600.5
CDS-3UTR CAA 90 bp TACACCAAGTTTATAAAGGGAGATAATATCCAGACCTCAACAAGATATCTGCTCTACCTTTGTAGTTTGTaGGTACAATGTCTTCATTCC +
Preference number: 5 (lower is better)
Translates to: YTKFIKGDNIQTSTRYLLYLCSL*VQCLHS
Trigger: GGAATGAAGACATTGTACCAACAAACTACAAAGGTA...GAGCAGATATCTTGTTGAGGTCTGGATATTATCTCCCTTTATAAACTTGGTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp GATAGAGAATATTCCGAAGACTTCCCAATGTTCTGTTTTCTGGGTTTAGTCTATAAAACGTCTTACTCGTaGGTGAAGAAGATAGAGAAT +
Preference number: 5 (lower is better)
Translates to: DREYSEDFPMFCFLGLVYKTSYS*VKKIEN
Trigger: ATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTT...ATAGACTAAACCCAGAAAACAGAACATTGGGAAGTCTTCGGAATATTCTCTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000420970.5
ENST00000447566.5
CDS-3UTR CAA 90 bp TACACCAAGTTTATAAAGGGAGATAATATCCAGACCTCAACAAGATATCTGCTCAAAACGTCTTACTCGTaGGTGAAGAAGATAGAGAAT +
Preference number: 5 (lower is better)
Translates to: YTKFIKGDNIQTSTRYLLKTSYS*VKKIEN
Trigger: ATTCTCTATCTTCTTCACCAACGAGTAAGACGTTTT...GAGCAGATATCTTGTTGAGGTCTGGATATTATCTCCCTTTATAAACTTGGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263255.10
ENST00000435456.7
ENST00000544408.5
CDS-3UTR CAA 90 bp AGGAAGAAAGCTTCATCCGTTTCTTTAAAAGCTGCCGTTTTAAACCTTCATAAAATTTTTCCCATCTGGTaGCAAACTCAACGTAATACC +
Preference number: 5 (lower is better)
Translates to: RKKASSVSLKAAVLNLHKIFPIW*QTQRNT
Trigger: GGTATTACGTTGAGTTTGCAACCAGATGGGAAAAAT...TTTATGAAGGTTTAAAACGGCAGCTTTTAAAGAAACGGATGAAGCTTTCTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263255.10
CDS CAA 90 bp CGGCCACGGCGTGGACCAGGCTTTCGTAGGACAGCACGGAAGCCATaGGTGCGGCTCCTCGAAGACCCAGCCACACTTTTCCCACAGATG +
Preference number: 6 (lower is better)
Translates to: RPRRGPGFRRTARKP*VRLLEDPATLFPQM
Trigger: CATCTGTGGGAAAAGTGTGGCTGGGTCTTCGAGGAGCCGCACCAATGGCTTCCGTGCTGTCCTACGAAAGCCTGGTCCACGCCGTGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000420970.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000434185.1
ENST00000434193.5
ENST00000435456.7
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
ENST00000491545.5
ENST00000544408.5
CDS TCA 72 bp AGTGGAGTTAGGAAAGGAGCACCGGAGCTCAGGGTGTaGGAGTCGCAATCCCCGCCCTCTCAAACCCGCCCG +
Preference number: 6 (lower is better)
Translates to: SGVRKGAPELRV*ESQSPPSQTRP
Trigger: CGGGCGGGTTTGAGAGGGCGGGGATTGCGACTCTCACACCCTGAGCTCCGGTGCTCCTTTCCTAACTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412879.5
ENST00000434185.1
ENST00000443810.5
ENST00000458600.5
ENST00000544408.5
CDS GCA 72 bp GACCAGGCTTTCGTAGGACAGCACGGAAGCCATTGGTaGGGCTCCTCGAAGACCCAGCCACACTTTTCCCAC +
Preference number: 6 (lower is better)
Translates to: DQAFVGQHGSHW*GSSKTQPHFSH
Trigger: GTGGGAAAAGTGTGGCTGGGTCTTCGAGGAGCCGCACCAATGGCTTCCGTGCTGTCCTACGAAAGCCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000420970.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000434185.1
ENST00000434193.5
ENST00000435456.7
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
ENST00000491545.5
ENST00000544408.5
CDS CCA 72 bp GTGGACCAGGCTTTCGTAGGACAGCACGGAAGCCATTaGTGCGGCTCCTCGAAGACCCAGCCACACTTTTCC +
Preference number: 6 (lower is better)
Translates to: VDQAFVGQHGSH*CGSSKTQPHFS
Trigger: GGAAAAGTGTGGCTGGGTCTTCGAGGAGCCGCACCAATGGCTTCCGTGCTGTCCTACGAAAGCCTGGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000420970.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000434185.1
ENST00000434193.5
ENST00000435456.7
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
ENST00000491545.5
ENST00000544408.5
CDS CAA 72 bp CGTGGACCAGGCTTTCGTAGGACAGCACGGAAGCCATaGGTGCGGCTCCTCGAAGACCCAGCCACACTTTTC +
Preference number: 6 (lower is better)
Translates to: RGPGFRRTARKP*VRLLEDPATLF
Trigger: GAAAAGTGTGGCTGGGTCTTCGAGGAGCCGCACCAATGGCTTCCGTGCTGTCCTACGAAAGCCTGGTCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000263255.10
ENST00000412879.5
ENST00000420970.5
ENST00000426396.5
ENST00000427084.5
ENST00000430221.5
ENST00000434185.1
ENST00000434193.5
ENST00000435456.7
ENST00000443810.5
ENST00000447566.5
ENST00000449676.5
ENST00000458600.5
ENST00000491545.5
ENST00000544408.5
CDS TCA 72 bp ACGCTTCCCATGTTAGCCAGGATGGTCTCGATCTCCTaGCCTCATGATCCACCCGCCTCAGGCCTCCCAAAG +
Preference number: 6 (lower is better)
Translates to: TLPMLARMVSIS*PHDPPASGLPK
Trigger: CTTTGGGAGGCCTGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGGAAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434185.1
CDS CAA 90 bp CAGGGTACAACACAAGCCACTACTGTTAGAAGCGATTTGGAAGCTTaGCTGATAGCAAAATGGCTGGCGGCAGCAGCTCTCCAGATGAAG +
Preference number: 6 (lower is better)
Translates to: QGTTQATTVRSDLEA*LIAKWLAAAALQMK
Trigger: CTTCATCTGGAGAGCTGCTGCCGCCAGCCATTTTGCTATCAGCAAAGCTTCCAAATCGCTTCTAACAGTAGTGGCTTGTGTTGTACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402844.7
CDS CAA 90 bp TCTTTGTGCCAGGGTACAACACAAGCCACTACTGTTAGAAGCGATTaGGAAGCTTTGCTGATAGCAAAATGGCTGGCGGCAGCAGCTCTC +
Preference number: 6 (lower is better)
Translates to: SLCQGTTQATTVRSD*EALLIAKWLAAAAL
Trigger: GAGAGCTGCTGCCGCCAGCCATTTTGCTATCAGCAAAGCTTCCAAATCGCTTCTAACAGTAGTGGCTTGTGTTGTACCCTGGCACAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402844.7
CDS CAA 72 bp ACACAAGCCACTACTGTTAGAAGCGATTTGGAAGCTTaGCTGATAGCAAAATGGCTGGCGGCAGCAGCTCTC +
Preference number: 6 (lower is better)
Translates to: TQATTVRSDLEA*LIAKWLAAAAL
Trigger: GAGAGCTGCTGCCGCCAGCCATTTTGCTATCAGCAAAGCTTCCAAATCGCTTCTAACAGTAGTGGCTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402844.7
CDS CAA 72 bp CAGGGTACAACACAAGCCACTACTGTTAGAAGCGATTaGGAAGCTTTGCTGATAGCAAAATGGCTGGCGGCA +
Preference number: 6 (lower is better)
Translates to: QGTTQATTVRSD*EALLIAKWLAA
Trigger: TGCCGCCAGCCATTTTGCTATCAGCAAAGCTTCCAAATCGCTTCTAACAGTAGTGGCTTGTGTTGTACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402844.7
CDS CAA 90 bp ATCTGCAACAAACCCAACTACCAGATCTTTTCCAGTGGTAGAATGTaGACCTTTGACCCAGAGTGCTTTGAGGCTATTAAAAGTGTAGAA +
Preference number: 6 (lower is better)
Translates to: ICNKPNYQIFSSGRM*TFDPECFEAIKSVE
Trigger: TTCTACACTTTTAATAGCCTCAAAGCACTCTGGGTCAAAGGTCAACATTCTACCACTGGAAAAGATCTGGTAGTTGGGTTTGTTGCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426396.5
CDS TCA 72 bp AGCTACATACCAATATTCCATTTATATCTCTGTCACTaGCCTCTTAGGAGACCTAAGGTAAGGTGTCTCTTT +
Preference number: 6 (lower is better)
Translates to: SYIPIFHLYLCH*PLRRPKVRCLF
Trigger: AAAGAGACACCTTACCTTAGGTCTCCTAAGAGGTCAGTGACAGAGATATAAATGGAATATTGGTATGTAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402844.7